Citrus Sinensis ID: 007903
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 585 | 2.2.26 [Sep-21-2011] | |||||||
| P59099 | 442 | Amino-acid acetyltransfer | yes | no | 0.641 | 0.848 | 0.317 | 6e-45 | |
| Q9CMJ6 | 440 | Amino-acid acetyltransfer | yes | no | 0.623 | 0.829 | 0.291 | 7e-43 | |
| Q4ZZU5 | 432 | Amino-acid acetyltransfer | yes | no | 0.393 | 0.532 | 0.384 | 4e-39 | |
| P61919 | 432 | Amino-acid acetyltransfer | N/A | no | 0.393 | 0.532 | 0.384 | 4e-39 | |
| Q88AR2 | 432 | Amino-acid acetyltransfer | yes | no | 0.377 | 0.511 | 0.392 | 1e-38 | |
| P0A100 | 432 | Amino-acid acetyltransfer | yes | no | 0.521 | 0.706 | 0.346 | 2e-38 | |
| P0A0Z9 | 432 | Amino-acid acetyltransfer | yes | no | 0.521 | 0.706 | 0.346 | 2e-38 | |
| Q8XZZ5 | 451 | Amino-acid acetyltransfer | yes | no | 0.389 | 0.505 | 0.372 | 2e-38 | |
| B0KP70 | 432 | Amino-acid acetyltransfer | yes | no | 0.521 | 0.706 | 0.346 | 2e-38 | |
| A4XP61 | 432 | Amino-acid acetyltransfer | yes | no | 0.370 | 0.502 | 0.394 | 2e-38 |
| >sp|P59099|ARGA_BUCAP Amino-acid acetyltransferase OS=Buchnera aphidicola subsp. Schizaphis graminum (strain Sg) GN=argA PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 182 bits (462), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 144/454 (31%), Positives = 205/454 (45%), Gaps = 79/454 (17%)
Query: 82 QFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHV 141
+ V+ FR + PY+ AHRG FV+++SGE + I+ DI LH LGIR ++V G+
Sbjct: 7 ELVQGFRHSVPYINAHRGKKFVIMLSGEAIKYGNFSGIINDIGLLHSLGIRLIVVYGSCP 66
Query: 142 QIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDS 201
QI+ L E+ + Y R+TD SL +AAG +++ I A+LS + N G
Sbjct: 67 QINANLKEKNIKITYHKYIRVTDLLSLEQVKQAAGRLQLDITARLSMS--LSNTPLQG-- 122
Query: 202 SRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGY 261
++V SGNF+ A+ G VD G + Y
Sbjct: 123 -----ANINVVSGNFIIAQPLG----VDDG---------------------------IDY 146
Query: 262 SSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQRVK 321
SG + + + A C L A LI + + ES +L
Sbjct: 147 CHSGRIRRID--KKAINCQLENGAIVLIGPVAVSVTGESFNL-----------------T 187
Query: 322 QSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWS 381
EIA + E + F S V SQ GKT SE N + G G +
Sbjct: 188 SEEIATQVSIKLKAEKMIGFC---SKQGVIDSQ-GKTISELLPNNIQNEIKKLEGKGDYI 243
Query: 382 SEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGT 441
S + L + C+ GV R HL+ G LL ELF RDG+GT
Sbjct: 244 SST----------------IRFLRGSIKACKSGVNRSHLISYHKNGALLQELFSRDGIGT 287
Query: 442 MVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIA 501
+ + E R A + D+ GI ++I+PL + G LVRR+ E+L +D F ++ER+ IA
Sbjct: 288 QMVMESAEKIRQANINDIGGILELIRPLEKKGILVRRSREQLEMEVDKFTIIERDNLTIA 347
Query: 502 CAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLL 535
CAAL+PFFKEK GE+A + V P+ R +GD LL
Sbjct: 348 CAALYPFFKEKIGEMACVAVHPDYRNSSRGDLLL 381
|
Buchnera aphidicola subsp. Schizaphis graminum (strain Sg) (taxid: 198804) EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 1 |
| >sp|Q9CMJ6|ARGA_PASMU Amino-acid acetyltransferase OS=Pasteurella multocida (strain Pm70) GN=argA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 175 bits (444), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 134/460 (29%), Positives = 209/460 (45%), Gaps = 95/460 (20%)
Query: 82 QFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHV 141
+ V WFR++ PY+ HRG TFV+++ G+ ++ P I+ DI+ LH LGI+ VLV G
Sbjct: 5 ELVHWFRQSTPYVNMHRGKTFVIMLDGDTIACPNFVNIINDISLLHSLGIKLVLVFGARY 64
Query: 142 QIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDS 201
QI++LL + E+ Y RITD SL +A G + I ++LS P
Sbjct: 65 QINELLQQHQIESVYHKNIRITDLTSLELVKQAVGKLNYDIASRLSLRLP---------- 114
Query: 202 SRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGY 261
H + V SGNF+ A+ GV D G + Y
Sbjct: 115 ---HSPLIDVVSGNFVLAQPIGV------------------------DDG-------IDY 140
Query: 262 SSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQ--R 319
SG++ NT + + D+ ++ GPI A S+ +
Sbjct: 141 QLSGKIRRINTESIQQ------QLDRDAIVLIGPI---------------APSVTGESFN 179
Query: 320 VKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGL 379
+ EIA+ + E + F + I +N +T S+ L
Sbjct: 180 LPFEEIASQLAIKLKAEKLIGFSATQGI----LDENNQTISD-----------------L 218
Query: 380 WSSEQGFAIGGQERLSRLNGYLSE----LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFK 435
+ + +L + N Y S L AA CR G++R HL+ G LL ELF
Sbjct: 219 LPQDAELYLA---KLIQQNQYHSSQARFLQAAIEACRFGIKRSHLISYEEDGSLLQELFT 275
Query: 436 RDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVER 495
RDG+GT ++ + E R A V+D+ + ++I+PL + G LV+R+ E+L ++ + +++R
Sbjct: 276 RDGVGTQLSMEHSETIRLATVSDIPALLELIRPLEQQGILVKRSREQLEMEINQYTIIDR 335
Query: 496 EGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLL 535
+G IIACAAL + EK E+A + V P+ R +GD LL
Sbjct: 336 DGVIIACAALNCYADEKMAEMACVAVHPDYRNSSRGDILL 375
|
Pasteurella multocida (strain Pm70) (taxid: 272843) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q4ZZU5|ARGA_PSEU2 Amino-acid acetyltransferase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=argA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 97/252 (38%), Positives = 145/252 (57%), Gaps = 22/252 (8%)
Query: 82 QFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHV 141
++V W R A PY+ AHR TFVV++ G+ V+ P I+ D+ LH LG+R VLV G+
Sbjct: 3 EYVNWLRHASPYINAHRDCTFVVMLPGDGVAHPNFGNIVHDLVLLHSLGVRLVLVHGSRP 62
Query: 142 QIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLS---PGPPICNIRRH 198
QI+ L++RG +Y RITD+E+L ++A G +R+ IEA+LS P+ R
Sbjct: 63 QIESRLAQRGITPRYHRDLRITDTETLECVIDAVGQLRISIEARLSMDMAASPMQGSR-- 120
Query: 199 GDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSN 258
+ V SGN + A+ GV++GVDY TGEV++VD + LD +V+LS
Sbjct: 121 ----------LRVTSGNVVTARPIGVLEGVDYQHTGEVRRVDRKGINRLLDERHIVLLSP 170
Query: 259 LGYSSSGEVLNCNTYEVATACALAIEADKLICI-IDGPILDESGHLIRFLTLQEADSLIR 317
LGYS +GE+ N +VAT A+ + ADKL+ + +LDE G L+R L Q+ + ++
Sbjct: 171 LGYSPTGEIFNLACEDVATRAAIDLAADKLLLFGAETGLLDEQGRLVRELRPQQVPAHLQ 230
Query: 318 QRVKQSEIAANY 329
+ + ANY
Sbjct: 231 R------LGANY 236
|
Pseudomonas syringae pv. syringae (strain B728a) (taxid: 205918) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|P61919|ARGA_PSESY Amino-acid acetyltransferase OS=Pseudomonas syringae pv. syringae GN=argA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 97/252 (38%), Positives = 145/252 (57%), Gaps = 22/252 (8%)
Query: 82 QFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHV 141
++V W R A PY+ AHR TFVV++ G+ V+ P I+ D+ LH LG+R VLV G+
Sbjct: 3 EYVNWLRHASPYINAHRDCTFVVMLPGDGVAHPNFGNIVHDLVLLHSLGVRLVLVHGSRP 62
Query: 142 QIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLS---PGPPICNIRRH 198
QI+ L++RG +Y RITD+E+L ++A G +R+ IEA+LS P+ R
Sbjct: 63 QIESRLAQRGITPRYHRDLRITDTETLECVIDAVGQLRISIEARLSMDMAASPMQGSR-- 120
Query: 199 GDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSN 258
+ V SGN + A+ GV++GVDY TGEV++VD + LD +V+LS
Sbjct: 121 ----------LRVTSGNVVTARPIGVLEGVDYQHTGEVRRVDRKGINRLLDERHIVLLSP 170
Query: 259 LGYSSSGEVLNCNTYEVATACALAIEADKLICI-IDGPILDESGHLIRFLTLQEADSLIR 317
LGYS +GE+ N +VAT A+ + ADKL+ + +LDE G L+R L Q+ + ++
Sbjct: 171 LGYSPTGEIFNLACEDVATRAAIDLAADKLLLFGAETGLLDEQGRLVRELRPQQVPAHLQ 230
Query: 318 QRVKQSEIAANY 329
+ + ANY
Sbjct: 231 R------LGANY 236
|
Pseudomonas syringae pv. syringae (taxid: 321) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q88AR2|ARGA_PSESM Amino-acid acetyltransferase OS=Pseudomonas syringae pv. tomato (strain DC3000) GN=argA PE=3 SV=2 | Back alignment and function description |
|---|
Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/237 (39%), Positives = 138/237 (58%), Gaps = 16/237 (6%)
Query: 82 QFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHV 141
++V W R A PY+ AHR TFVV++ G+ V+ P I+ D+ LH LG+R VLV G+
Sbjct: 3 EYVNWLRHASPYINAHRDCTFVVMLPGDGVAHPNFGNIVHDLVLLHSLGVRLVLVHGSRP 62
Query: 142 QIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLS---PGPPICNIRRH 198
QI+ L++RG +Y RITD+E+L ++A G +R+ IEA+LS P+ R
Sbjct: 63 QIESRLAQRGITPRYHRDMRITDTETLECVIDAVGQLRISIEARLSMDMAASPMQGSR-- 120
Query: 199 GDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSN 258
+ V SGN + A+ GV++G+DY TGEV++VD + LD +V+LS
Sbjct: 121 ----------LRVTSGNVVTARPIGVLEGIDYQHTGEVRRVDRKGINRLLDERHIVLLSP 170
Query: 259 LGYSSSGEVLNCNTYEVATACALAIEADKLICI-IDGPILDESGHLIRFLTLQEADS 314
LGYS +GE+ N +VAT A+ + ADKL+ + +LDE G L+R L Q+ +
Sbjct: 171 LGYSPTGEIFNLACEDVATRAAIDLAADKLLLFGAETGLLDEQGRLVRELRPQQVPA 227
|
Pseudomonas syringae pv. tomato (strain DC3000) (taxid: 223283) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|P0A100|ARGA_PSEPU Amino-acid acetyltransferase OS=Pseudomonas putida GN=argA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/338 (34%), Positives = 171/338 (50%), Gaps = 33/338 (9%)
Query: 83 FVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQ 142
+V W R A PY+ AHR TFVV++ G+ V P I+ D+ LH LG+R VLV G+ Q
Sbjct: 4 YVNWLRHASPYINAHRDCTFVVMLPGDGVEHPNFGNIVHDLVLLHSLGVRLVLVHGSRPQ 63
Query: 143 IDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLS---PGPPICNIRRHG 199
I+ L++RG Y RITD+ +L ++A G +R+ IEA+LS P+ R
Sbjct: 64 IESRLADRGLTPHYHRGMRITDAATLDCVIDAVGALRLAIEARLSMDIAASPMQGSR--- 120
Query: 200 DSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL 259
+ VASGN + A+ GV++GVDY TGEV++VD + LD +V+LS L
Sbjct: 121 ---------LRVASGNLVTARPIGVLEGVDYHHTGEVRRVDRKGISRLLDERSIVLLSPL 171
Query: 260 GYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP-ILDESGHLIRFLTLQEADSLIRQ 318
GYS +GE+ N +VAT A+ + ADKL+ P +LD G L+R L Q+ + Q
Sbjct: 172 GYSPTGEIFNLACEDVATRAAIELGADKLLLFGAEPGLLDADGRLVRELRPQQVAPHL-Q 230
Query: 319 RVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNG 378
R+ S+ + A AE C G V +++G +E F G G G
Sbjct: 231 RLG-SDYQGELLDAAAE---ACKGGVARSHIVSYAEDGALLTE----LFTRG-----GGG 277
Query: 379 LWSSEQGFAIGGQERLSRLNGYL---SELAAAAFVCRR 413
S++ F + + + + G L S L + RR
Sbjct: 278 TLVSQEQFEVVREATIEDVGGLLELISPLEEQGILVRR 315
|
Pseudomonas putida (taxid: 303) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|P0A0Z9|ARGA_PSEPK Amino-acid acetyltransferase OS=Pseudomonas putida (strain KT2440) GN=argA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/338 (34%), Positives = 171/338 (50%), Gaps = 33/338 (9%)
Query: 83 FVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQ 142
+V W R A PY+ AHR TFVV++ G+ V P I+ D+ LH LG+R VLV G+ Q
Sbjct: 4 YVNWLRHASPYINAHRDCTFVVMLPGDGVEHPNFGNIVHDLVLLHSLGVRLVLVHGSRPQ 63
Query: 143 IDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLS---PGPPICNIRRHG 199
I+ L++RG Y RITD+ +L ++A G +R+ IEA+LS P+ R
Sbjct: 64 IESRLADRGLTPHYHRGMRITDAATLDCVIDAVGALRLAIEARLSMDIAASPMQGSR--- 120
Query: 200 DSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL 259
+ VASGN + A+ GV++GVDY TGEV++VD + LD +V+LS L
Sbjct: 121 ---------LRVASGNLVTARPIGVLEGVDYHHTGEVRRVDRKGISRLLDERSIVLLSPL 171
Query: 260 GYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP-ILDESGHLIRFLTLQEADSLIRQ 318
GYS +GE+ N +VAT A+ + ADKL+ P +LD G L+R L Q+ + Q
Sbjct: 172 GYSPTGEIFNLACEDVATRAAIELGADKLLLFGAEPGLLDADGRLVRELRPQQVAPHL-Q 230
Query: 319 RVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNG 378
R+ S+ + A AE C G V +++G +E F G G G
Sbjct: 231 RLG-SDYQGELLDAAAE---ACKGGVARSHIVSYAEDGALLTE----LFTRG-----GGG 277
Query: 379 LWSSEQGFAIGGQERLSRLNGYL---SELAAAAFVCRR 413
S++ F + + + + G L S L + RR
Sbjct: 278 TLVSQEQFEVVREATIEDVGGLLELISPLEEQGILVRR 315
|
Pseudomonas putida (strain KT2440) (taxid: 160488) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q8XZZ5|ARGA_RALSO Amino-acid acetyltransferase OS=Ralstonia solanacearum (strain GMI1000) GN=argA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/244 (37%), Positives = 144/244 (59%), Gaps = 16/244 (6%)
Query: 79 EDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPG 138
E +QFV W R PY+ A R TFV+ GE+V + L ++ DIA LH +G+ VLV G
Sbjct: 18 EQQQFVDWLRAVAPYIHAFRDKTFVIGFGGELVKAGMLGALVNDIALLHAMGMHIVLVHG 77
Query: 139 THVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLS---PGPPICNI 195
+ Q+++ L+ R + +++ R+TD+ +L +A EA+G +R+ IEA S P P+
Sbjct: 78 SRPQVEEQLALRHVQTQFVDGIRVTDNAALESAKEASGELRLDIEATFSQALPNTPMAGA 137
Query: 196 RRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVI 255
R +SV SGNF+ A+ G+V+GVD+ TG V+K+D ++ L +V+
Sbjct: 138 R------------ISVVSGNFVTARPVGIVNGVDFQHTGLVRKIDAESIQHSLSNRKIVL 185
Query: 256 LSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP-ILDESGHLIRFLTLQEADS 314
LS LG+S +G+ N + +VAT A A++ADKLI I + P I+D G L + L+++ A
Sbjct: 186 LSPLGFSPTGQAFNLSMEDVATNTATALKADKLIFITEVPGIMDRVGKLQQELSMESAIE 245
Query: 315 LIRQ 318
+R+
Sbjct: 246 RLRE 249
|
Ralstonia solanacearum (strain GMI1000) (taxid: 267608) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|B0KP70|ARGA_PSEPG Amino-acid acetyltransferase OS=Pseudomonas putida (strain GB-1) GN=argA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/338 (34%), Positives = 171/338 (50%), Gaps = 33/338 (9%)
Query: 83 FVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQ 142
+V W R A PY+ AHR TFVV++ G+ V P I+ D+ LH LG+R VLV G+ Q
Sbjct: 4 YVNWLRHASPYINAHRDCTFVVMLPGDGVEHPNFGNIVHDLVLLHSLGVRLVLVHGSRPQ 63
Query: 143 IDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLS---PGPPICNIRRHG 199
I+ L++RG Y RITD+ +L ++A G +R+ IEA+LS P+ R
Sbjct: 64 IESRLADRGLTPHYHRGMRITDAATLDCVIDAVGALRLAIEARLSMDIAASPMQGSR--- 120
Query: 200 DSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL 259
+ VASGN + A+ GV++GVDY TGEV++VD + LD +V+LS L
Sbjct: 121 ---------LRVASGNLVTARPIGVLEGVDYHHTGEVRRVDRKGISRLLDERSIVLLSPL 171
Query: 260 GYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP-ILDESGHLIRFLTLQEADSLIRQ 318
GYS +GE+ N +VAT A+ + ADKL+ P +LD G L+R L Q+ + Q
Sbjct: 172 GYSPTGEIFNLACEDVATRAAIELGADKLLLFGAEPGLLDADGKLVRELRPQQVAPHL-Q 230
Query: 319 RVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNG 378
R+ S+ + A AE C G V +++G +E F G G G
Sbjct: 231 RLG-SDYQGELLDAAAE---ACKGGVARSHIVSYAEDGALLTE----LFTRG-----GGG 277
Query: 379 LWSSEQGFAIGGQERLSRLNGYL---SELAAAAFVCRR 413
S++ F + + + + G L S L + RR
Sbjct: 278 TLVSQEQFEVVREASIEDVGGLLELISPLEEQGILVRR 315
|
Pseudomonas putida (strain GB-1) (taxid: 76869) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|A4XP61|ARGA_PSEMY Amino-acid acetyltransferase OS=Pseudomonas mendocina (strain ymp) GN=argA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/233 (39%), Positives = 135/233 (57%), Gaps = 16/233 (6%)
Query: 83 FVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQ 142
+V W R A PY+ AHR TFVV++ GE ++ P I+ D+ LH LG+R VLV G+ Q
Sbjct: 4 YVTWLRHASPYINAHRDRTFVVMLPGEGIAHPNFANIVHDLVLLHSLGVRLVLVHGSRPQ 63
Query: 143 IDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLS---PGPPICNIRRHG 199
I+ L+ RG + RITD+ +L ++A G +R+ IEA+LS P+ R
Sbjct: 64 IEARLAARGLTPHFHRDLRITDAPTLECVIDAVGQLRIAIEARLSMDMAASPMQGSR--- 120
Query: 200 DSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL 259
+ + SGNF+ A+ GV+DGVDY TGEV+++D + +LD +V+LS L
Sbjct: 121 ---------LRLTSGNFVTARPIGVLDGVDYHHTGEVRRIDRKGINRQLDERSIVLLSPL 171
Query: 260 GYSSSGEVLNCNTYEVATACALAIEADKLICI-IDGPILDESGHLIRFLTLQE 311
GYS +GE+ N +VAT A+ + ADKL+ + +LDE G L+R L Q+
Sbjct: 172 GYSPTGEIFNLACEDVATRAAIDLGADKLLLFGAEDGLLDEHGQLVRELRPQQ 224
|
Pseudomonas mendocina (strain ymp) (taxid: 399739) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 585 | ||||||
| 224095037 | 560 | predicted protein [Populus trichocarpa] | 0.851 | 0.889 | 0.785 | 0.0 | |
| 356565491 | 565 | PREDICTED: amino-acid acetyltransferase- | 0.811 | 0.840 | 0.792 | 0.0 | |
| 356540624 | 607 | PREDICTED: amino-acid acetyltransferase- | 0.887 | 0.855 | 0.732 | 0.0 | |
| 356514348 | 617 | PREDICTED: LOW QUALITY PROTEIN: amino-ac | 0.811 | 0.769 | 0.766 | 0.0 | |
| 356496999 | 605 | PREDICTED: amino-acid acetyltransferase- | 0.815 | 0.788 | 0.760 | 0.0 | |
| 255568615 | 705 | N-acetyltransferase, putative [Ricinus c | 0.817 | 0.678 | 0.725 | 0.0 | |
| 297798106 | 611 | hypothetical protein ARALYDRAFT_490852 [ | 0.900 | 0.862 | 0.692 | 0.0 | |
| 297821519 | 609 | hypothetical protein ARALYDRAFT_481154 [ | 0.808 | 0.776 | 0.742 | 0.0 | |
| 18420097 | 543 | N-acetyl-l-glutamate synthase 2 [Arabido | 0.895 | 0.965 | 0.686 | 0.0 | |
| 42573209 | 613 | N-acetyl-l-glutamate synthase 2 [Arabido | 0.894 | 0.853 | 0.682 | 0.0 |
| >gi|224095037|ref|XP_002310336.1| predicted protein [Populus trichocarpa] gi|222853239|gb|EEE90786.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 809 bits (2089), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/514 (78%), Positives = 442/514 (85%), Gaps = 16/514 (3%)
Query: 53 KERNLSKCKVFSEAMGGNVEETYNPVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVS 112
+ + S+ KVF EA G++EE YN VED+QFVKWFREAWPYLWAHRG TFVVIISGE VS
Sbjct: 10 RTNSTSRRKVFGEAESGSIEEGYNSVEDKQFVKWFREAWPYLWAHRGSTFVVIISGETVS 69
Query: 113 SPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAM 172
SP+LD ILK FLHHLGI+FVLVPGTHVQI+ LL+ERGHE K++G+YRITDSE+LAA+M
Sbjct: 70 SPFLDSILK-ATFLHHLGIKFVLVPGTHVQINNLLAERGHEPKHVGQYRITDSEALAASM 128
Query: 173 EAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGA 232
EAAG IRMMIEAKLSPGP ICNIRRHGDSSRWH+VGVSVASGNFLAAKR+GVVDGVD+GA
Sbjct: 129 EAAGKIRMMIEAKLSPGPSICNIRRHGDSSRWHDVGVSVASGNFLAAKRRGVVDGVDFGA 188
Query: 233 TGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICII 292
TGEVKKVDVTRMRERLDGGC+V+LSNLGYSSSGEVLNCNTYEVATACALAI ADKLIC+I
Sbjct: 189 TGEVKKVDVTRMRERLDGGCIVVLSNLGYSSSGEVLNCNTYEVATACALAIGADKLICVI 248
Query: 293 DGPILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYS 352
DGPILDESGHLIRFLTL+EAD LIR+R KQSEIAA+YVKAV +ED+T H+DSIG + S
Sbjct: 249 DGPILDESGHLIRFLTLEEADMLIRKRAKQSEIAAHYVKAVGDEDLTFLEHNDSIGILAS 308
Query: 353 SQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCR 412
S NGK S R ATF NGVGFDNGNG QGFAIGG+E SRLNGYLSELAAAAFVC+
Sbjct: 309 SLNGKALSGRHSATFQNGVGFDNGNG-----QGFAIGGEELQSRLNGYLSELAAAAFVCK 363
Query: 413 RGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVES 472
GVQRVHLLDGTI GVLLLELFKRDGMGTMVASDLYEGTR A+VTDL+GI+QIIQPL ES
Sbjct: 364 GGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRMARVTDLAGIRQIIQPLEES 423
Query: 473 GALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGD 532
G LVRRTDEELLKAL ++ VVEREGQIIACAALFPFF+EKCGEVAAI VSPECRGQGQGD
Sbjct: 424 GTLVRRTDEELLKALYAYVVVEREGQIIACAALFPFFEEKCGEVAAIAVSPECRGQGQGD 483
Query: 533 KL----------LGLCIWPLLSETRYDHISTNGF 556
KL LGL LL+ D + GF
Sbjct: 484 KLLDFIERRASSLGLETLFLLTTRTADWFNRRGF 517
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356565491|ref|XP_003550973.1| PREDICTED: amino-acid acetyltransferase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 775 bits (2000), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/483 (79%), Positives = 424/483 (87%), Gaps = 8/483 (1%)
Query: 58 SKCK---VFSEAMGGNV--EETYNPVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVS 112
+ CK VFSE G+V EE+++ ++D+QFV+WFRE WPYLWAHRG TFVVIISGEIV+
Sbjct: 10 TTCKRRNVFSEEFNGSVAEEESFSSMDDKQFVRWFRETWPYLWAHRGATFVVIISGEIVT 69
Query: 113 SPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAM 172
SP LDPILKDIAFLHHLGIRFVLVPGTHVQID LL ERG + KY+G YRITD ESLAAAM
Sbjct: 70 SPLLDPILKDIAFLHHLGIRFVLVPGTHVQIDNLLRERGRQPKYVGPYRITDDESLAAAM 129
Query: 173 EAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGA 232
EAAG IR+MIEAKLSPGP I NIRRHGD+SR HEVGVSVASGNFLAAKR+GVV G+D+G+
Sbjct: 130 EAAGRIRLMIEAKLSPGPSIYNIRRHGDNSRLHEVGVSVASGNFLAAKRRGVVKGIDFGS 189
Query: 233 TGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICII 292
TGEVKKVD++RMRERLDG C+VILSNLGYSSSGEVLNCN YEVATACALA+ ADKLICI
Sbjct: 190 TGEVKKVDISRMRERLDGNCIVILSNLGYSSSGEVLNCNAYEVATACALAVRADKLICIT 249
Query: 293 DGPILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYS 352
DGPILDESGHLIRFL LQEAD LIR++V++SE AANYVKAVAEE + + G+V+S
Sbjct: 250 DGPILDESGHLIRFLPLQEADMLIRKQVEESETAANYVKAVAEESFKSLKNFN--GAVHS 307
Query: 353 SQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCR 412
+NGK FSE +TF+NGVGFDNGNGL S + GFAIGGQE LSR NGYLSELAAAAFVCR
Sbjct: 308 PRNGKPFSEYHNSTFHNGVGFDNGNGL-SGKHGFAIGGQESLSRTNGYLSELAAAAFVCR 366
Query: 413 RGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVES 472
GVQRVHLLDGTI GVLLLELFKRDGMGTMVASDLYEGTR A+VTD SGIKQ+IQPL ES
Sbjct: 367 GGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRMAQVTDFSGIKQLIQPLEES 426
Query: 473 GALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGD 532
G LV+RTDEELL++L SF VVEREGQIIACAALFPFF+EKCGEVAAI VSP+CRGQGQGD
Sbjct: 427 GILVKRTDEELLQSLGSFIVVEREGQIIACAALFPFFEEKCGEVAAIAVSPDCRGQGQGD 486
Query: 533 KLL 535
KLL
Sbjct: 487 KLL 489
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356540624|ref|XP_003538787.1| PREDICTED: amino-acid acetyltransferase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 759 bits (1959), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/531 (73%), Positives = 440/531 (82%), Gaps = 12/531 (2%)
Query: 7 SVSASATKTQLLFSSRVSNSLKPAQNLGFQLQ-GQILKGLCHHSIKNKERNLSKCKVFSE 65
+ S + + L+SS S+ L P NL F G ++ + + N+++
Sbjct: 11 NTSGTLSDFNKLYSSSHSHHL-PKPNLQFNSSWGPEVRPVTAAHLGNRKK--------LN 61
Query: 66 AMGGNVEETYN-PVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIA 124
A+ + E +Y+ +ED+QFV+ FREAWPYLWA+RG TFVVIISGEIVS P+LD ILKDIA
Sbjct: 62 ALSEDGESSYHGSMEDKQFVRSFREAWPYLWAYRGSTFVVIISGEIVSGPFLDVILKDIA 121
Query: 125 FLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEA 184
FL+HLGIRFVLVPGTHVQIDKLL+ERG + Y+GRYRITD ESL AAMEAAGGIR+MIEA
Sbjct: 122 FLNHLGIRFVLVPGTHVQIDKLLNERGCQPMYVGRYRITDDESLEAAMEAAGGIRLMIEA 181
Query: 185 KLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRM 244
KLSPGP ICNIRRHGD+SRWHEVGVSVASGNFLAAKR+GVV+G+D+G+TGEVKKVDVTRM
Sbjct: 182 KLSPGPSICNIRRHGDNSRWHEVGVSVASGNFLAAKRRGVVNGIDFGSTGEVKKVDVTRM 241
Query: 245 RERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLI 304
RERLDGGC+V+L+NLGYSSSGEVLNCNTYEVATACALAI ADKLICIIDGPILDESGHLI
Sbjct: 242 RERLDGGCVVVLTNLGYSSSGEVLNCNTYEVATACALAIGADKLICIIDGPILDESGHLI 301
Query: 305 RFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRI 364
RFL LQEAD LIR+R KQS+ AANYVKAV EE ++ G+V S G F+E
Sbjct: 302 RFLPLQEADMLIRKRAKQSDAAANYVKAVDEEGFNSLECNNFNGTVKSPPIG-CFTEWHN 360
Query: 365 ATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGT 424
ATF+NGVGF+NGNGL S EQGFAIGGQERLSR+NGYLSELAAAAFVCR GVQRVHLLDGT
Sbjct: 361 ATFHNGVGFENGNGLGSGEQGFAIGGQERLSRMNGYLSELAAAAFVCRGGVQRVHLLDGT 420
Query: 425 IGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELL 484
I GVLLLELFKRDGMGTMVASDLYEGTRTA+V D+SGIKQ+I PL SG LV+RTDEELL
Sbjct: 421 ISGVLLLELFKRDGMGTMVASDLYEGTRTAEVKDISGIKQLIHPLEASGILVKRTDEELL 480
Query: 485 KALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLL 535
K LDSF VVEREG IIACAA+FP F+EKCGEVA I VSP+CRGQGQGDKLL
Sbjct: 481 KTLDSFVVVEREGHIIACAAIFPHFEEKCGEVACIAVSPDCRGQGQGDKLL 531
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356514348|ref|XP_003525868.1| PREDICTED: LOW QUALITY PROTEIN: amino-acid acetyltransferase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 753 bits (1943), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/496 (76%), Positives = 418/496 (84%), Gaps = 21/496 (4%)
Query: 58 SKCK---VFSEAMGGNV--EETYNPVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVS 112
+ CK VFSE G+V EE+YN ++++QFV+WFRE WPYLWAHRG TFVVIISGEIV+
Sbjct: 49 TTCKGRNVFSEEFNGSVAEEESYNSMDNKQFVRWFRETWPYLWAHRGATFVVIISGEIVT 108
Query: 113 SPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAM 172
SP LDPILKDIAFLHHLGIRFVLVPGTHVQID LL ERG + KY+G YRITD ESLAAAM
Sbjct: 109 SPLLDPILKDIAFLHHLGIRFVLVPGTHVQIDNLLLERGRQPKYVGPYRITDDESLAAAM 168
Query: 173 EAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNF-------------LAA 219
EAAG IR+MIEAKLSPGP I N RRHG +SR HEVGVSVASGNF
Sbjct: 169 EAAGRIRLMIEAKLSPGPSIYNSRRHGGNSRLHEVGVSVASGNFSFFQDGNDQVSGARVP 228
Query: 220 KRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATAC 279
R+GVV GVD+G+TGEVKKVD++RMRERLDG C+VILSNLGYSSSGEVL+CNTYEVATAC
Sbjct: 229 WRRGVVKGVDFGSTGEVKKVDISRMRERLDGDCIVILSNLGYSSSGEVLDCNTYEVATAC 288
Query: 280 ALAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDIT 339
ALA+ ADKLICI DGPILDESGHLIRFLTLQEAD LIR+R++QSE ANYVKAVAEE
Sbjct: 289 ALAVRADKLICITDGPILDESGHLIRFLTLQEADMLIRKRLEQSETTANYVKAVAEESFK 348
Query: 340 CFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNG 399
+ + G+V+SSQNGK FSE +TF+NGVGFDNGNGL S EQGFAIGGQE L R NG
Sbjct: 349 SLKNFN--GAVHSSQNGKPFSECHNSTFHNGVGFDNGNGL-SEEQGFAIGGQESLCRTNG 405
Query: 400 YLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDL 459
YLSELAAAAFVCR GVQRVHLLDGTI GVLLLELFKRDGMGTMVASDLYEGTR A+VTD
Sbjct: 406 YLSELAAAAFVCRGGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRMAQVTDF 465
Query: 460 SGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAI 519
SGIK++IQP ESG LV+ TDEELL++L SF VVEREGQIIACAALFPFF+EKCGEVAAI
Sbjct: 466 SGIKKLIQPFEESGILVKXTDEELLQSLGSFIVVEREGQIIACAALFPFFEEKCGEVAAI 525
Query: 520 GVSPECRGQGQGDKLL 535
VSP+CRGQGQGDKLL
Sbjct: 526 AVSPDCRGQGQGDKLL 541
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356496999|ref|XP_003517352.1| PREDICTED: amino-acid acetyltransferase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 738 bits (1904), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/488 (76%), Positives = 413/488 (84%), Gaps = 11/488 (2%)
Query: 79 EDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPG 138
ED +FVK RE+ PY+ HRG FV++IS E+V+SPY +PILKDIAFL+HLGIRFVLVPG
Sbjct: 74 EDHEFVKALRESQPYVSVHRGRLFVLLISAELVASPYFNPILKDIAFLNHLGIRFVLVPG 133
Query: 139 THVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRH 198
THVQIDKLL+ERG + KY+GRYRITD ESL AAMEAAGGIR+MIEAKLSPGP ICNIRRH
Sbjct: 134 THVQIDKLLNERGCQPKYVGRYRITDDESLEAAMEAAGGIRLMIEAKLSPGPSICNIRRH 193
Query: 199 GDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSN 258
GD+SRWHEVGVSVASGNFLAAKR+GVV+G+D+G+TGEVKKVDV+RMRERLDGGC+VIL+N
Sbjct: 194 GDNSRWHEVGVSVASGNFLAAKRRGVVNGIDFGSTGEVKKVDVSRMRERLDGGCVVILTN 253
Query: 259 LGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQ 318
LGYSSSGEVLNCNTYEVATACALAI ADKLIC+IDGPILDESG LIRFL LQEAD LIR+
Sbjct: 254 LGYSSSGEVLNCNTYEVATACALAIGADKLICLIDGPILDESGRLIRFLPLQEADMLIRK 313
Query: 319 RVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNG 378
R +QSE AANYVKAV EE +++ G+V S G+ F+E ATF+NGVGF++GNG
Sbjct: 314 RAEQSEAAANYVKAVDEEGFNSLEYNNFNGAVKSPPIGR-FTEWHNATFHNGVGFESGNG 372
Query: 379 LWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDG 438
L S EQGFAIGGQERLSR+NGYLSELAAAAFVCR GVQRVHLLDGTI GVLLLELFKRDG
Sbjct: 373 LGSGEQGFAIGGQERLSRMNGYLSELAAAAFVCRGGVQRVHLLDGTISGVLLLELFKRDG 432
Query: 439 MGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQ 498
MGTMVASDLYEGTRTA V D+SGIKQ+IQPL SG LV+RTDEELLK LDSF VVEREG
Sbjct: 433 MGTMVASDLYEGTRTAGVKDISGIKQLIQPLEASGILVKRTDEELLKTLDSFIVVEREGH 492
Query: 499 IIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKL----------LGLCIWPLLSETRY 548
IIACAALFP F+EKCGEVA I VSP+CRGQGQGDKL LGL + LL+
Sbjct: 493 IIACAALFPHFEEKCGEVACIAVSPDCRGQGQGDKLLDYMEKKASSLGLNMLFLLTTRTA 552
Query: 549 DHISTNGF 556
D GF
Sbjct: 553 DWFVRRGF 560
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255568615|ref|XP_002525281.1| N-acetyltransferase, putative [Ricinus communis] gi|223535439|gb|EEF37109.1| N-acetyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 735 bits (1897), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/507 (72%), Positives = 416/507 (82%), Gaps = 29/507 (5%)
Query: 79 EDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPG 138
+D ++V+ RE PY+ HR TFVV++SGE+V SP+LD +L+DIAFLHHLGIRFVLVPG
Sbjct: 68 DDRKYVEVLREVQPYILLHRRSTFVVVLSGEVVDSPFLDNLLQDIAFLHHLGIRFVLVPG 127
Query: 139 THVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRH 198
THVQID LL+ERGHEA+Y+G YRITD+E+L+A+MEAAG IRM++EAKLSPGP ICNIRRH
Sbjct: 128 THVQIDNLLAERGHEAQYVGPYRITDTEALSASMEAAGKIRMLMEAKLSPGPSICNIRRH 187
Query: 199 GDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSN 258
GDSSRWH+VGVSVASGNFLAAKR+GVV+GVD+GATGEVKKVDVTRMRERLD C+V+LSN
Sbjct: 188 GDSSRWHDVGVSVASGNFLAAKRRGVVEGVDFGATGEVKKVDVTRMRERLDANCIVLLSN 247
Query: 259 LGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQ 318
LGYSSSGEVLNCNTYEVATACALAI ADKLICIIDGPILDESGHLIR+L ++EAD+LIR+
Sbjct: 248 LGYSSSGEVLNCNTYEVATACALAIGADKLICIIDGPILDESGHLIRYLAIEEADALIRK 307
Query: 319 RVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTF---SERRIATFNNGVGFDN 375
R KQSEIAANYVKAV +ED T HSDS+ + SSQNGK S +++ NG +
Sbjct: 308 RAKQSEIAANYVKAVGKEDFTSIEHSDSVRVISSSQNGKPINGDSVNVMSSSQNGKPVNG 367
Query: 376 GNG----------------LWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVH 419
+G LWS EQGFAIGG ER SRLNGYLSELAAA FVC+ GVQRVH
Sbjct: 368 RHGATFHFQNGVGFGNGNGLWSGEQGFAIGGHERQSRLNGYLSELAAATFVCKGGVQRVH 427
Query: 420 LLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRT 479
LLDGTIGGVLLLELFKRDGMGTMVASDLYEGTR A++TDLSGI+QIIQPL +SG LVRRT
Sbjct: 428 LLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRMARMTDLSGIRQIIQPLEDSGVLVRRT 487
Query: 480 DEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKL----- 534
DEELLKALDSF V+EREGQIIACAALFPFF+EKCGEVAAI VSPECRGQGQGDKL
Sbjct: 488 DEELLKALDSFVVMEREGQIIACAALFPFFEEKCGEVAAIAVSPECRGQGQGDKLLDFIE 547
Query: 535 -----LGLCIWPLLSETRYDHISTNGF 556
LGL + LL+ D GF
Sbjct: 548 KKASSLGLEMLFLLTTRTADWFKRRGF 574
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297798106|ref|XP_002866937.1| hypothetical protein ARALYDRAFT_490852 [Arabidopsis lyrata subsp. lyrata] gi|297312773|gb|EFH43196.1| hypothetical protein ARALYDRAFT_490852 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 730 bits (1884), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/534 (69%), Positives = 426/534 (79%), Gaps = 7/534 (1%)
Query: 8 VSASATKTQLLFSSRVSNSLKPAQNLGFQLQGQILKGLCHHSIKNKERNLSKCKVFSEAM 67
V S++ + F R S + P+ +L + C +KC +F A+
Sbjct: 7 VGTSSSSCYVPFQFRQSKTFFPSFRPKTKLNPIQFRFNCPWFKPVSSVTAAKCNMFDYAV 66
Query: 68 --GGNVEETYNPVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAF 125
GG+VE + PV+D+QFV+WFREAWPYLWAHRG TFVVIISGEI++ DPILKDIAF
Sbjct: 67 SAGGDVEAEH-PVDDKQFVRWFREAWPYLWAHRGCTFVVIISGEIIAGSSCDPILKDIAF 125
Query: 126 LHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAK 185
LHHLGIRFVLVPGT QID+LLSERG EA Y+GRYR+TD+ SL AA EAAG I +M+EAK
Sbjct: 126 LHHLGIRFVLVPGTQEQIDELLSERGREATYVGRYRVTDAASLQAAKEAAGAISVMLEAK 185
Query: 186 LSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMR 245
LSPGP ICNIRRHGD +R H++GV V +GNF AAKR+GVVDGVD+GATGEVKK+DV R+
Sbjct: 186 LSPGPSICNIRRHGDRNRLHDIGVRVDTGNFFAAKRRGVVDGVDFGATGEVKKIDVDRIC 245
Query: 246 ERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIR 305
ERLDGG +V+L NLG+SSSGEVLNCNTYEVATACALAI ADKLICI+DGPILDESGHLIR
Sbjct: 246 ERLDGGSIVLLRNLGHSSSGEVLNCNTYEVATACALAIGADKLICIMDGPILDESGHLIR 305
Query: 306 FLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGS-VYSSQNGKTF---SE 361
FLTLQEAD L+R R +QS+IAANYVKAV + +T ++ S + S QNG+ +
Sbjct: 306 FLTLQEADMLVRTRAQQSDIAANYVKAVGDGSMTYPEPPNNTSSKITSPQNGRAAFWGNG 365
Query: 362 RRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLL 421
F NGVGFDNGNGLWS EQGFAIGG+ERLSRLNGYLSELAAAAFVCR GV+RVHLL
Sbjct: 366 NHTPVFQNGVGFDNGNGLWSGEQGFAIGGEERLSRLNGYLSELAAAAFVCRGGVKRVHLL 425
Query: 422 DGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDE 481
DGTI GVLLLELFKRDGMGTMVASD+YEGTR A+V DL GI+ II+PL ESG LVRRTDE
Sbjct: 426 DGTISGVLLLELFKRDGMGTMVASDVYEGTRDARVEDLEGIRHIIKPLEESGILVRRTDE 485
Query: 482 ELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLL 535
ELL+ALDSF VVEREGQIIACAALFPFF++KCGEVAAI V+ +CRGQGQGDKLL
Sbjct: 486 ELLRALDSFVVVEREGQIIACAALFPFFEDKCGEVAAIAVASDCRGQGQGDKLL 539
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297821519|ref|XP_002878642.1| hypothetical protein ARALYDRAFT_481154 [Arabidopsis lyrata subsp. lyrata] gi|297324481|gb|EFH54901.1| hypothetical protein ARALYDRAFT_481154 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 726 bits (1874), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/481 (74%), Positives = 403/481 (83%), Gaps = 8/481 (1%)
Query: 58 SKCKVFSEAMGGNVEETYNPVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLD 117
+KC +F A G N V D+QFV+WFREAWPYLWAHR TFVV ISG+++ PY D
Sbjct: 57 AKCNMFDYAETGE-----NLVGDKQFVRWFREAWPYLWAHRSCTFVVTISGDVLDGPYCD 111
Query: 118 PILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGG 177
+LKDIAFLHHLGI+FVLVPGT VQID+LL+ERG E Y+GRYR+TDS SL AA EAAG
Sbjct: 112 LVLKDIAFLHHLGIKFVLVPGTQVQIDQLLAERGREPTYVGRYRVTDSASLQAAKEAAGA 171
Query: 178 IRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVK 237
I +MIEAKLSPGP I NIRRHGDSSR HE GV V +GNF AAKR+GVVDGVD+GATG VK
Sbjct: 172 ISVMIEAKLSPGPSIYNIRRHGDSSRLHETGVRVDTGNFFAAKRRGVVDGVDFGATGLVK 231
Query: 238 KVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPIL 297
K+DV R+RERLD G +V+L NLG+SSSGEVLNCNTYEVATACALAI ADKLICI+DGPIL
Sbjct: 232 KIDVDRIRERLDSGSVVLLRNLGHSSSGEVLNCNTYEVATACALAIGADKLICIMDGPIL 291
Query: 298 DESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQN-- 355
DE+GHL+RFLTLQEAD+L+R+R +QSEIAANYVKAV + I+ F + ++ N
Sbjct: 292 DENGHLVRFLTLQEADTLVRKRAQQSEIAANYVKAVGDGGISSFPEPLGYNGMVTTPNNH 351
Query: 356 -GKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRG 414
G+ E+ TF NGVGFDNGNGLWS EQGFAIGG+ER+SRLNGYLSELAAAAFVCR G
Sbjct: 352 IGRPIWEKHTLTFQNGVGFDNGNGLWSGEQGFAIGGEERISRLNGYLSELAAAAFVCRGG 411
Query: 415 VQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGA 474
V RVHLLDGTI GVLLLELFKRDGMGTMVASD+YEGTR AKV DL+GI+QII PL ESGA
Sbjct: 412 VNRVHLLDGTISGVLLLELFKRDGMGTMVASDVYEGTREAKVEDLAGIRQIITPLEESGA 471
Query: 475 LVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKL 534
LVRRTDEELL+ALDSF VVEREGQIIACAALFPFF++KCGEVAAI V+ +CRGQGQGDKL
Sbjct: 472 LVRRTDEELLRALDSFVVVEREGQIIACAALFPFFEDKCGEVAAIAVASDCRGQGQGDKL 531
Query: 535 L 535
L
Sbjct: 532 L 532
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|18420097|ref|NP_568032.1| N-acetyl-l-glutamate synthase 2 [Arabidopsis thaliana] gi|332661423|gb|AEE86823.1| N-acetyl-l-glutamate synthase 2 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 726 bits (1874), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/543 (68%), Positives = 433/543 (79%), Gaps = 19/543 (3%)
Query: 2 ATTHHSVSASATKTQLLFSS-RVSNSLKPAQNLGFQLQGQILKGLCHHSIKNKERNLSKC 60
+T+ + V +++ FSS + N L P Q F+ K + SI +KC
Sbjct: 11 STSSYYVPYHFRQSKSNFSSFKPKNKLNPTQ---FRFNCSWFKPV--SSI-----TAAKC 60
Query: 61 KVFSEAM--GGNVEETYNPVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDP 118
+F A+ G+VE + PV+D+QFV+WFREAWPYLWAHRG TFVVIISGEI++ D
Sbjct: 61 NMFDYAVTAAGDVEAEH-PVDDKQFVRWFREAWPYLWAHRGCTFVVIISGEIIAGSSCDA 119
Query: 119 ILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGI 178
ILKDIAFLHHLGIRFVLVPGT QID+LL+ERG EA Y+GRYR+TD+ SL AA EAAG I
Sbjct: 120 ILKDIAFLHHLGIRFVLVPGTQEQIDQLLAERGREATYVGRYRVTDAASLQAAKEAAGAI 179
Query: 179 RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKK 238
+M+EAKLSPGP ICNIRRHGD SR H++GV V +GNF AAKR+GVVDGVD+GATGEVKK
Sbjct: 180 SVMLEAKLSPGPSICNIRRHGDRSRLHDIGVRVDTGNFFAAKRRGVVDGVDFGATGEVKK 239
Query: 239 VDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD 298
+DV R+ ERLDGG +V+L NLG+SSSGEVLNCNTYEVATACALAI ADKLICI+DGPILD
Sbjct: 240 IDVDRICERLDGGSVVLLRNLGHSSSGEVLNCNTYEVATACALAIGADKLICIMDGPILD 299
Query: 299 ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSI-GSVYSSQNGK 357
ESGHLI FLTLQEAD L+R+R +QS+IAANYVKAV + + ++ G++ S+QNG+
Sbjct: 300 ESGHLIHFLTLQEADMLVRKRAQQSDIAANYVKAVGDGSMAYPEPPNNTNGNITSAQNGR 359
Query: 358 TFS----ERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRR 413
S F NGVGFDNGNGLW EQGFAIGG+ERLSRLNGYLSELAAAAFVCR
Sbjct: 360 AVSFWGNGNHTPIFQNGVGFDNGNGLWPCEQGFAIGGEERLSRLNGYLSELAAAAFVCRG 419
Query: 414 GVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESG 473
GV+RVHLLDGTI GVLLLELFKRDGMGTMVASD+YEGTR A+V DL+GI+ II+PL ESG
Sbjct: 420 GVKRVHLLDGTISGVLLLELFKRDGMGTMVASDVYEGTRDARVEDLAGIRHIIKPLEESG 479
Query: 474 ALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDK 533
LVRRTDEELL+ALDSF VVEREGQIIACAALFPFFK+KCGEVAAI V+ +CRGQGQGDK
Sbjct: 480 ILVRRTDEELLRALDSFVVVEREGQIIACAALFPFFKDKCGEVAAIAVASDCRGQGQGDK 539
Query: 534 LLG 536
LLG
Sbjct: 540 LLG 542
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|42573209|ref|NP_974701.1| N-acetyl-l-glutamate synthase 2 [Arabidopsis thaliana] gi|209414522|gb|ACI46501.1| At4g37670 [Arabidopsis thaliana] gi|332661422|gb|AEE86822.1| N-acetyl-l-glutamate synthase 2 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 725 bits (1871), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/542 (68%), Positives = 431/542 (79%), Gaps = 19/542 (3%)
Query: 2 ATTHHSVSASATKTQLLFSS-RVSNSLKPAQNLGFQLQGQILKGLCHHSIKNKERNLSKC 60
+T+ + V +++ FSS + N L P Q F+ K + + +KC
Sbjct: 11 STSSYYVPYHFRQSKSNFSSFKPKNKLNPTQ---FRFNCSWFKPVSSITA-------AKC 60
Query: 61 KVFSEAM--GGNVEETYNPVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDP 118
+F A+ G+VE + PV+D+QFV+WFREAWPYLWAHRG TFVVIISGEI++ D
Sbjct: 61 NMFDYAVTAAGDVEAEH-PVDDKQFVRWFREAWPYLWAHRGCTFVVIISGEIIAGSSCDA 119
Query: 119 ILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGI 178
ILKDIAFLHHLGIRFVLVPGT QID+LL+ERG EA Y+GRYR+TD+ SL AA EAAG I
Sbjct: 120 ILKDIAFLHHLGIRFVLVPGTQEQIDQLLAERGREATYVGRYRVTDAASLQAAKEAAGAI 179
Query: 179 RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKK 238
+M+EAKLSPGP ICNIRRHGD SR H++GV V +GNF AAKR+GVVDGVD+GATGEVKK
Sbjct: 180 SVMLEAKLSPGPSICNIRRHGDRSRLHDIGVRVDTGNFFAAKRRGVVDGVDFGATGEVKK 239
Query: 239 VDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD 298
+DV R+ ERLDGG +V+L NLG+SSSGEVLNCNTYEVATACALAI ADKLICI+DGPILD
Sbjct: 240 IDVDRICERLDGGSVVLLRNLGHSSSGEVLNCNTYEVATACALAIGADKLICIMDGPILD 299
Query: 299 ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSI-GSVYSSQNGK 357
ESGHLI FLTLQEAD L+R+R +QS+IAANYVKAV + + ++ G++ S+QNG+
Sbjct: 300 ESGHLIHFLTLQEADMLVRKRAQQSDIAANYVKAVGDGSMAYPEPPNNTNGNITSAQNGR 359
Query: 358 TFS----ERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRR 413
S F NGVGFDNGNGLW EQGFAIGG+ERLSRLNGYLSELAAAAFVCR
Sbjct: 360 AVSFWGNGNHTPIFQNGVGFDNGNGLWPCEQGFAIGGEERLSRLNGYLSELAAAAFVCRG 419
Query: 414 GVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESG 473
GV+RVHLLDGTI GVLLLELFKRDGMGTMVASD+YEGTR A+V DL+GI+ II+PL ESG
Sbjct: 420 GVKRVHLLDGTISGVLLLELFKRDGMGTMVASDVYEGTRDARVEDLAGIRHIIKPLEESG 479
Query: 474 ALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDK 533
LVRRTDEELL+ALDSF VVEREGQIIACAALFPFFK+KCGEVAAI V+ +CRGQGQGDK
Sbjct: 480 ILVRRTDEELLRALDSFVVVEREGQIIACAALFPFFKDKCGEVAAIAVASDCRGQGQGDK 539
Query: 534 LL 535
LL
Sbjct: 540 LL 541
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 585 | ||||||
| TAIR|locus:2120130 | 613 | NAGS2 "N-acetyl-l-glutamate sy | 0.815 | 0.778 | 0.717 | 2.7e-180 | |
| TAIR|locus:2059165 | 609 | NAGS1 "N-acetyl-l-glutamate sy | 0.808 | 0.776 | 0.713 | 1e-178 | |
| UNIPROTKB|P22567 | 432 | argA "Amino-acid acetyltransfe | 0.413 | 0.560 | 0.381 | 7.1e-68 | |
| TIGR_CMR|CPS_0465 | 436 | CPS_0465 "amino-acid N-acetylt | 0.394 | 0.529 | 0.394 | 3.3e-65 | |
| UNIPROTKB|P0A6C5 | 443 | argA [Escherichia coli K-12 (t | 0.410 | 0.541 | 0.329 | 3.6e-62 | |
| TIGR_CMR|SO_4245 | 445 | SO_4245 "amino-acid acetyltran | 0.403 | 0.530 | 0.353 | 3.9e-61 | |
| UNIPROTKB|Q9KPQ0 | 445 | argA "Amino-acid acetyltransfe | 0.393 | 0.516 | 0.359 | 5.1e-57 | |
| TIGR_CMR|VC_2316 | 445 | VC_2316 "N-acetylglutamate syn | 0.393 | 0.516 | 0.359 | 5.1e-57 | |
| TIGR_CMR|CHY_2263 | 294 | CHY_2263 "acetylglutamate kina | 0.376 | 0.748 | 0.270 | 1.1e-18 | |
| TIGR_CMR|GSU_0150 | 292 | GSU_0150 "acetylglutamate kina | 0.369 | 0.739 | 0.277 | 4.1e-15 |
| TAIR|locus:2120130 NAGS2 "N-acetyl-l-glutamate synthase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1750 (621.1 bits), Expect = 2.7e-180, P = 2.7e-180
Identities = 348/485 (71%), Positives = 400/485 (82%)
Query: 58 SKCKVFSEAM--GGNVEETYNPVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPY 115
+KC +F A+ G+VE + PV+D+QFV+WFREAWPYLWAHRG TFVVIISGEI++
Sbjct: 58 AKCNMFDYAVTAAGDVEAEH-PVDDKQFVRWFREAWPYLWAHRGCTFVVIISGEIIAGSS 116
Query: 116 LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAA 175
D ILKDIAFLHHLGIRFVLVPGT QID+LL+ERG EA Y+GRYR+TD+ SL AA EAA
Sbjct: 117 CDAILKDIAFLHHLGIRFVLVPGTQEQIDQLLAERGREATYVGRYRVTDAASLQAAKEAA 176
Query: 176 GGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGE 235
G I +M+EAKLSPGP ICNIRRHGD SR H++GV V +GNF AAKR+GVVDGVD+GATGE
Sbjct: 177 GAISVMLEAKLSPGPSICNIRRHGDRSRLHDIGVRVDTGNFFAAKRRGVVDGVDFGATGE 236
Query: 236 VKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP 295
VKK+DV R+ ERLDGG +V+L NLG+SSSGEVLNCNTYEVATACALAI ADKLICI+DGP
Sbjct: 237 VKKIDVDRICERLDGGSVVLLRNLGHSSSGEVLNCNTYEVATACALAIGADKLICIMDGP 296
Query: 296 ILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITC-FGHSDSIGSVYSSQ 354
ILDESGHLI FLTLQEAD L+R+R +QS+IAANYVKAV + + +++ G++ S+Q
Sbjct: 297 ILDESGHLIHFLTLQEADMLVRKRAQQSDIAANYVKAVGDGSMAYPEPPNNTNGNITSAQ 356
Query: 355 NGKTFS----ERRIATXXXXXXXXXXXXLWSSEQGFAIGGQERLSRLNGYLSELAAAAFV 410
NG+ S LW EQGFAIGG+ERLSRLNGYLSELAAAAFV
Sbjct: 357 NGRAVSFWGNGNHTPIFQNGVGFDNGNGLWPCEQGFAIGGEERLSRLNGYLSELAAAAFV 416
Query: 411 CRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLV 470
CR GV+RVHLLDGTI GVLLLELFKRDGMGTMVASD+YEGTR A+V DL+GI+ II+PL
Sbjct: 417 CRGGVKRVHLLDGTISGVLLLELFKRDGMGTMVASDVYEGTRDARVEDLAGIRHIIKPLE 476
Query: 471 ESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQ 530
ESG LVRRTDEELL+ALDSF VVEREGQIIACAALFPFFK+KCGEVAAI V+ +CRGQGQ
Sbjct: 477 ESGILVRRTDEELLRALDSFVVVEREGQIIACAALFPFFKDKCGEVAAIAVASDCRGQGQ 536
Query: 531 GDKLL 535
GDKLL
Sbjct: 537 GDKLL 541
|
|
| TAIR|locus:2059165 NAGS1 "N-acetyl-l-glutamate synthase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1735 (615.8 bits), Expect = 1.0e-178, P = 1.0e-178
Identities = 343/481 (71%), Positives = 392/481 (81%)
Query: 58 SKCKVFSEAMGGNVEETYNPVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLD 117
+KC +F A G N V D+QFV+WFREAWPYLWAHR TFVV ISG+++ PY D
Sbjct: 57 AKCNIFDYAETGE-----NLVGDKQFVRWFREAWPYLWAHRSCTFVVTISGDVLDGPYCD 111
Query: 118 PILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGG 177
+LKDIAFLHHLGI+FVLVPGT VQID+LL+ERG E Y+GRYR+TDS SL AA EAAG
Sbjct: 112 LVLKDIAFLHHLGIKFVLVPGTQVQIDQLLAERGREPTYVGRYRVTDSASLQAAKEAAGA 171
Query: 178 IRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVK 237
I +MIEAKLSPGP I NIRRHGDSSR HE GV V +GNF AAKR+GVVDGVD+GATG VK
Sbjct: 172 ISVMIEAKLSPGPSIYNIRRHGDSSRLHETGVRVDTGNFFAAKRRGVVDGVDFGATGLVK 231
Query: 238 KVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPIL 297
K+DV R+RERLD G +V+L NLG+SS+GEVLNCNTYEVATACALAI ADKLICI+DGP+L
Sbjct: 232 KIDVDRIRERLDSGSVVLLRNLGHSSTGEVLNCNTYEVATACALAIGADKLICIMDGPVL 291
Query: 298 DESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQN-- 355
DE+GHL+RFLTLQEAD+L+R+R +QSEIAANYVKAV + I+ F + ++ N
Sbjct: 292 DENGHLVRFLTLQEADTLVRKRAQQSEIAANYVKAVGDGGISSFPEPLGYNGMVTTPNNH 351
Query: 356 -GKTFSERRIATXXXXXXXXXXXXLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRG 414
G+ E+ T LWS EQGFAIGG+ER+SRLNGYLSELAAAAFVCR G
Sbjct: 352 IGRPIWEKLSPTFQNGVGFDNGNGLWSGEQGFAIGGEERISRLNGYLSELAAAAFVCRGG 411
Query: 415 VQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGA 474
V+RVHLLDGTI GVLLLELFKRDGMGTMVASD+YEG R AKV DL+GI+QII+PL ESGA
Sbjct: 412 VKRVHLLDGTISGVLLLELFKRDGMGTMVASDVYEGNREAKVEDLAGIRQIIKPLEESGA 471
Query: 475 LVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKL 534
LVRRTDEELL+ALDSF VVEREG IIACAALFPFF+EKCGEVAAI V+ +CRGQGQGDKL
Sbjct: 472 LVRRTDEELLRALDSFVVVEREGHIIACAALFPFFEEKCGEVAAIAVASDCRGQGQGDKL 531
Query: 535 L 535
L
Sbjct: 532 L 532
|
|
| UNIPROTKB|P22567 argA "Amino-acid acetyltransferase" [Pseudomonas aeruginosa PAO1 (taxid:208964)] | Back alignment and assigned GO terms |
|---|
Score = 384 (140.2 bits), Expect = 7.1e-68, Sum P(2) = 7.1e-68
Identities = 97/254 (38%), Positives = 142/254 (55%)
Query: 83 FVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQ 142
+V W R A PY+ +HR TFVV++ GE V P I+ D+ LH LG R VLV G+ Q
Sbjct: 4 YVNWLRHASPYINSHRDRTFVVMLPGEGVEHPNFGNIVHDLVLLHSLGARLVLVHGSRPQ 63
Query: 143 IDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSS 202
I+ L+ RG +Y R+TD+ +L ++A G +R+ IEA+LS +S
Sbjct: 64 IEARLAARGLAPRYHRDLRVTDAPTLECVIDAVGSLRIAIEARLSMDMA---------AS 114
Query: 203 RWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYS 262
+ VA GN + A+ GVV+GVDY TGEV+++D + LD +V+LS LGYS
Sbjct: 115 PMQGARLRVAGGNLVTARPIGVVEGVDYHHTGEVRRIDRKGIGRLLDERSIVLLSPLGYS 174
Query: 263 SSGEVLNCNTYEVATACALAIEADKLICI-IDGPILDESGHLIRFLTLQEADSLIRQRVK 321
+GE+ N +VA A+ +EA+KLI + +LD SG L+R L Q+ + + QR+
Sbjct: 175 PTGEIFNLACEDVAMRAAIDLEAEKLILYGAEQGLLDASGKLVRELRPQQVPAHL-QRLG 233
Query: 322 QSEIAANYVKAVAE 335
S A + A A+
Sbjct: 234 NS-YQAELLDAAAQ 246
|
|
| TIGR_CMR|CPS_0465 CPS_0465 "amino-acid N-acetyltransferase" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
|---|
Score = 437 (158.9 bits), Expect = 3.3e-65, Sum P(2) = 3.3e-65
Identities = 95/241 (39%), Positives = 147/241 (60%)
Query: 80 DEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGT 139
++ +VKWFR A PY+ AHRG T V++ GE V+ P I+ DI+ L LG++ V+V G
Sbjct: 5 EQNYVKWFRNAAPYINAHRGKTVVLMFGGEAVTHPNFANIIHDISLLRSLGVKLVVVHGA 64
Query: 140 HVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHG 199
QI + +RG E + R+TD+++L A +A G +R+ IEA LS G + N HG
Sbjct: 65 RPQIVDRMQQRGLEENVVSNIRVTDAQTLVAVKDATGSLRLHIEALLSTG--VVNSPMHG 122
Query: 200 DSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL 259
R V++GNF+ AK GV +G+DY TG V+++D + +LD G +V+LS +
Sbjct: 123 SQIR-------VSTGNFVIAKPMGVRNGIDYKYTGTVRRIDSDGINMQLDYGSIVLLSPI 175
Query: 260 GYSSSGEVLNCNTYEVATACALAIEADKLICII-DGPILDESGHLIRFLTLQEADSLIRQ 318
GYS +GEV N +VAT A++++ADKLI D ++D+SG LIR +++ +L+ +
Sbjct: 176 GYSPTGEVFNLALEDVATQTAISLKADKLIAFTEDEGLIDKSGKLIRSCSVRTVKTLLDE 235
Query: 319 R 319
+
Sbjct: 236 K 236
|
|
| UNIPROTKB|P0A6C5 argA [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
Score = 358 (131.1 bits), Expect = 3.6e-62, Sum P(2) = 3.6e-62
Identities = 83/252 (32%), Positives = 140/252 (55%)
Query: 82 QFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHV 141
+ V+ FR + PY+ HRG TFV+++ GE + I+ DI LH LGIR V+V G
Sbjct: 8 ELVEGFRHSVPYINTHRGKTFVIMLGGEAIEHENFSSIVNDIGLLHSLGIRLVVVYGARP 67
Query: 142 QIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDS 201
QID L+ HE Y R+TD+++L +AAG +++ I A+LS + N G
Sbjct: 68 QIDANLAAHHHEPLYHKNIRVTDAKTLELVKQAAGTLQLDITARLSMS--LNNTPLQGA- 124
Query: 202 SRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGY 261
H ++V SGNF+ A+ GV DGVDY +G ++++D + +LD G +V++ +
Sbjct: 125 ---H---INVVSGNFIIAQPLGVDDGVDYCHSGRIRRIDEDAIHRQLDSGAIVLMGPVAV 178
Query: 262 SSSGEVLNCNTYEVATACALAIEADKLI--CIIDGPILDESGHLIRFLTLQEADSLIRQR 319
S +GE N + E+AT A+ ++A+K+I C G + ++ G ++ L EA + + +
Sbjct: 179 SVTGESFNLTSEEIATQLAIKLKAEKMIGFCSSQG-VTNDDGDIVSELFPNEAQARVEAQ 237
Query: 320 VKQSEIAANYVK 331
++ + + V+
Sbjct: 238 EEKGDYNSGTVR 249
|
|
| TIGR_CMR|SO_4245 SO_4245 "amino-acid acetyltransferase" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
|---|
Score = 367 (134.2 bits), Expect = 3.9e-61, Sum P(2) = 3.9e-61
Identities = 87/246 (35%), Positives = 135/246 (54%)
Query: 78 VEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVP 137
V + V FR + PY+ AHRG TFVV++ GE ++ IL D+A LH LGI+ VLV
Sbjct: 7 VRTTELVDGFRHSAPYVNAHRGKTFVVMLGGEALAQNQFRGILNDVALLHSLGIKVVLVY 66
Query: 138 GTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRR 197
G QID L+ G E Y RITD +SL + AG ++ I A+LS + N
Sbjct: 67 GARPQIDAALAANGIEPAYHDGVRITDEDSLKVIKQVAGALQFDITARLSMS--LSNTPM 124
Query: 198 HGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILS 257
G +++ SGNF+ A+ GV +GVD+ +G+V+++D ++ +LD C+V++
Sbjct: 125 QGAQ-------INLVSGNFVIAQPLGVDNGVDFCLSGKVRRIDAQGLKRQLDNHCIVLMG 177
Query: 258 NLGYSSSGEVLNCNTYEVATACALAIEADKLICIID-GPILDESGHLIRFLTLQEADSLI 316
+ S +GE N E+AT A+ ++ADK+I ILD +G +I L +A ++
Sbjct: 178 PIAASVTGESFNLTAEEIATQVAIKLKADKMIGFSSQNGILDRNGDVIAELMPNDAQKIL 237
Query: 317 RQRVKQ 322
+ +Q
Sbjct: 238 NKLAEQ 243
|
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| UNIPROTKB|Q9KPQ0 argA "Amino-acid acetyltransferase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] | Back alignment and assigned GO terms |
|---|
Score = 359 (131.4 bits), Expect = 5.1e-57, Sum P(2) = 5.1e-57
Identities = 87/242 (35%), Positives = 135/242 (55%)
Query: 78 VEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVP 137
+ VK FR++ PY+ AHRG T VV++ GE ++ I+ DIA LH LG++ VLV
Sbjct: 3 IRSTALVKGFRQSAPYVNAHRGKTMVVMLGGEAIADKNFPNIISDIALLHSLGVKVVLVH 62
Query: 138 GTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRR 197
G QI+++L + + Y RITD SL M+AAG ++ I A+LS + N
Sbjct: 63 GARPQINQILEKNQRDTPYHKGVRITDESSLGLVMQAAGQLQHAITARLSMS--LNNTPM 120
Query: 198 HGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILS 257
G ++V SGNF+ ++ G+ +GVDY +G ++++DV + LD G +V+L
Sbjct: 121 AGTQ-------LNVVSGNFIISQPLGIDEGVDYCHSGRIRRIDVEGINRMLDLGSIVLLG 173
Query: 258 NLGYSSSGEVLNCNTYEVATACALAIEADKLI--CIIDGPILDESGHLIRFLTLQEADSL 315
+ S +GE N + EVAT A+ ++ADKLI C G I+D G+ I L + + L
Sbjct: 174 PIASSVTGECFNLLSEEVATQVAIKLKADKLIGFCPQQG-IIDTKGNAIAELFPSDVERL 232
Query: 316 IR 317
++
Sbjct: 233 VK 234
|
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| TIGR_CMR|VC_2316 VC_2316 "N-acetylglutamate synthase" [Vibrio cholerae O1 biovar El Tor (taxid:686)] | Back alignment and assigned GO terms |
|---|
Score = 359 (131.4 bits), Expect = 5.1e-57, Sum P(2) = 5.1e-57
Identities = 87/242 (35%), Positives = 135/242 (55%)
Query: 78 VEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVP 137
+ VK FR++ PY+ AHRG T VV++ GE ++ I+ DIA LH LG++ VLV
Sbjct: 3 IRSTALVKGFRQSAPYVNAHRGKTMVVMLGGEAIADKNFPNIISDIALLHSLGVKVVLVH 62
Query: 138 GTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRR 197
G QI+++L + + Y RITD SL M+AAG ++ I A+LS + N
Sbjct: 63 GARPQINQILEKNQRDTPYHKGVRITDESSLGLVMQAAGQLQHAITARLSMS--LNNTPM 120
Query: 198 HGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILS 257
G ++V SGNF+ ++ G+ +GVDY +G ++++DV + LD G +V+L
Sbjct: 121 AGTQ-------LNVVSGNFIISQPLGIDEGVDYCHSGRIRRIDVEGINRMLDLGSIVLLG 173
Query: 258 NLGYSSSGEVLNCNTYEVATACALAIEADKLI--CIIDGPILDESGHLIRFLTLQEADSL 315
+ S +GE N + EVAT A+ ++ADKLI C G I+D G+ I L + + L
Sbjct: 174 PIASSVTGECFNLLSEEVATQVAIKLKADKLIGFCPQQG-IIDTKGNAIAELFPSDVERL 232
Query: 316 IR 317
++
Sbjct: 233 VK 234
|
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| TIGR_CMR|CHY_2263 CHY_2263 "acetylglutamate kinase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] | Back alignment and assigned GO terms |
|---|
Score = 194 (73.4 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 66/244 (27%), Positives = 120/244 (49%)
Query: 89 EAWPYLWAHRGGTFVVIISGE-IVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLL 147
EA PY+ G T V+ G +VS + ++ D+ + +GI V+V G +I ++L
Sbjct: 13 EALPYIKKFYGKTIVIKYGGHAMVSDQLKEAVINDLVLMKFVGINPVVVHGGGPEISRML 72
Query: 148 SERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEV 207
++ ++ ++ R+TD A +E + M++ K++ + I + G + V
Sbjct: 73 NKLNIKSNFINGLRVTDE----ATLEV---VEMVLVGKVNK-EIVGLIEKAGGKA----V 120
Query: 208 GVSVASGNFLAAKRKGVVD----GVDY---GATGEVKKVDVTRMRERLDGGCLVILSNLG 260
G+S + A +K + G +Y G GE+ +V+ + +D G + +++ +G
Sbjct: 121 GLSGKDAGLIKAHKKLAKNPEPTGEEYLDLGYVGEISEVNPEILLTLIDKGYIPVVAPVG 180
Query: 261 YSSSGEVLNCNTYEVATACALAIEADKLICIIDGP--ILDESGH--LIRFLTLQEADSLI 316
+ SGE N N EVA A+A++ADKLI + D P +L+E L+ T+ E LI
Sbjct: 181 SNGSGEFYNINADEVAAEVAVALKADKLIVLTDTPGILLNEKDENSLLSKATIAEVKELI 240
Query: 317 RQRV 320
+ V
Sbjct: 241 NRGV 244
|
|
| TIGR_CMR|GSU_0150 GSU_0150 "acetylglutamate kinase" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 189 (71.6 bits), Expect = 4.1e-15, Sum P(2) = 4.1e-15
Identities = 66/238 (27%), Positives = 112/238 (47%)
Query: 89 EAWPYLWAHRGGTFVVIISGEIVSSPYL-DPILKDIAFLHHLGIRFVLVPGTHVQIDKLL 147
EA PY+ G T V+ G ++ L + D+ L LGI V+V G QI++ L
Sbjct: 13 EALPYIRRFSGKTIVIKYGGHAMADEALKESFALDVIMLKSLGINPVVVHGGGPQINETL 72
Query: 148 SERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEV 207
G ++++ R+TD AA M+ + M++ +++ + + +HG + V
Sbjct: 73 KRYGIVSEFVKGMRVTD----AATMQV---VEMVLTGQVNK-EVVGYLNQHGGRA----V 120
Query: 208 GVSVASGNFLAAKR--------KGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL 259
G+S GN L ++ G V+ VD G G+V KV+ ++ G + +++ +
Sbjct: 121 GLSGKDGNLLLCRKLLQEVRQDDGTVESVDIGFVGDVVKVNQELIQTLEHGKFIPVIAPV 180
Query: 260 GYSSSGEVLNCNTYEVATACALAIEADKLICIID-GPILDESGHLIRFLTLQEADSLI 316
G GE N N VA A A+ A+KLI + D + D++G L+ + L LI
Sbjct: 181 GVGEQGESYNVNADLVAGRVAGALRAEKLILLTDVAGVKDKAGALLSSIRLDTVPGLI 238
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.3.1 | 0.766 |
| 4th Layer | 2.7.2.8 | LOW CONFIDENCE prediction! |
| 3rd Layer | 2.7.2 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | gw1.VII.115.1 | GCN5-related N-acetyltransferase (GNAT) family protein / amino acid kinase family protein (EC-2.7.2.8) (511 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | gw1.6145.3.1 | annotation not avaliable (279 aa) | • | • | • | • | • | 0.914 | |||
 | gw1.193.135.1 | annotation not avaliable (279 aa) | • | • | • | • | • | 0.914 | |||
 | estExt_fgenesh4_pm.C_LG_X0783 | delta-1-pyrroline-5-carboxylate synthetase (EC-2.7.2.11 1.2.1.41) (719 aa) | • | • | 0.909 | ||||||
 | gw1.97.87.1 | hypothetical protein (637 aa) | • | 0.899 | |||||||
 | eugene3.01290011 | annotation not avaliable (139 aa) | • | 0.899 | |||||||
 | eugene3.00150904 | glutamate dehydrogenase (NAD(P)+) (EC-1.4.1.3) (412 aa) | • | 0.899 | |||||||
 | eugene3.00130573 | glutamate dehydrogenase (NAD(P)+) (EC-1.4.1.3) (411 aa) | • | 0.899 | |||||||
 | estExt_fgenesh4_pg.C_LG_XIX0409 | glutamate dehydrogenase (NAD(P)+) (EC-1.4.1.3) (411 aa) | • | 0.899 | |||||||
 | estExt_fgenesh4_pg.C_2320019 | glutamate dehydrogenase (NAD(P)+) (EC-1.4.1.3) (412 aa) | • | 0.899 | |||||||
 | estExt_Genewise1_v1.C_2320006 | hypothetical protein (482 aa) | • | • | 0.849 | ||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 585 | |||
| PLN02825 | 515 | PLN02825, PLN02825, amino-acid N-acetyltransferase | 0.0 | |
| cd04237 | 280 | cd04237, AAK_NAGS-ABP, AAK_NAGS-ABP: N-acetylgluta | 1e-117 | |
| PRK05279 | 441 | PRK05279, PRK05279, N-acetylglutamate synthase; Va | 8e-78 | |
| TIGR01890 | 429 | TIGR01890, N-Ac-Glu-synth, amino-acid N-acetyltran | 1e-57 | |
| COG0548 | 265 | COG0548, ArgB, Acetylglutamate kinase [Amino acid | 3e-46 | |
| PRK05279 | 441 | PRK05279, PRK05279, N-acetylglutamate synthase; Va | 1e-43 | |
| TIGR01890 | 429 | TIGR01890, N-Ac-Glu-synth, amino-acid N-acetyltran | 7e-36 | |
| cd04238 | 256 | cd04238, AAK_NAGK-like, AAK_NAGK-like: N-Acetyl-L- | 1e-27 | |
| PRK00942 | 283 | PRK00942, PRK00942, acetylglutamate kinase; Provis | 4e-27 | |
| TIGR00761 | 231 | TIGR00761, argB, acetylglutamate kinase | 5e-25 | |
| cd04250 | 279 | cd04250, AAK_NAGK-C, AAK_NAGK-C: N-Acetyl-L-glutam | 1e-23 | |
| COG1246 | 153 | COG1246, ArgA, N-acetylglutamate synthase and rela | 1e-22 | |
| PLN02512 | 309 | PLN02512, PLN02512, acetylglutamate kinase | 3e-19 | |
| cd04252 | 248 | cd04252, AAK_NAGK-fArgBP, AAK_NAGK-fArgBP: N-Acety | 1e-17 | |
| CHL00202 | 284 | CHL00202, argB, acetylglutamate kinase; Provisiona | 3e-17 | |
| cd04237 | 280 | cd04237, AAK_NAGS-ABP, AAK_NAGS-ABP: N-acetylgluta | 7e-17 | |
| PRK14058 | 268 | PRK14058, PRK14058, acetylglutamate/acetylaminoadi | 3e-16 | |
| PRK07757 | 152 | PRK07757, PRK07757, acetyltransferase; Provisional | 3e-14 | |
| cd04251 | 257 | cd04251, AAK_NAGK-UC, AAK_NAGK-UC: N-Acetyl-L-glut | 9e-14 | |
| pfam00696 | 230 | pfam00696, AA_kinase, Amino acid kinase family | 2e-12 | |
| cd02115 | 248 | cd02115, AAK, Amino Acid Kinases (AAK) superfamily | 2e-12 | |
| cd04249 | 252 | cd04249, AAK_NAGK-NC, AAK_NAGK-NC: N-Acetyl-L-glut | 1e-08 | |
| COG0548 | 265 | COG0548, ArgB, Acetylglutamate kinase [Amino acid | 7e-08 | |
| PRK07922 | 169 | PRK07922, PRK07922, N-acetylglutamate synthase; Va | 9e-08 | |
| PRK12308 | 614 | PRK12308, PRK12308, bifunctional argininosuccinate | 2e-07 | |
| pfam13508 | 79 | pfam13508, Acetyltransf_7, Acetyltransferase (GNAT | 5e-07 | |
| cd04301 | 65 | cd04301, NAT_SF, N-Acyltransferase superfamily: Va | 2e-06 | |
| PRK04531 | 398 | PRK04531, PRK04531, acetylglutamate kinase; Provis | 3e-06 | |
| PRK00942 | 283 | PRK00942, PRK00942, acetylglutamate kinase; Provis | 4e-05 | |
| cd04238 | 256 | cd04238, AAK_NAGK-like, AAK_NAGK-like: N-Acetyl-L- | 5e-05 | |
| cd04250 | 279 | cd04250, AAK_NAGK-C, AAK_NAGK-C: N-Acetyl-L-glutam | 8e-05 | |
| pfam00583 | 80 | pfam00583, Acetyltransf_1, Acetyltransferase (GNAT | 9e-05 | |
| pfam13527 | 127 | pfam13527, Acetyltransf_9, Acetyltransferase (GNAT | 9e-04 |
| >gnl|CDD|215441 PLN02825, PLN02825, amino-acid N-acetyltransferase | Back alignment and domain information |
|---|
Score = 863 bits (2231), Expect = 0.0
Identities = 356/455 (78%), Positives = 400/455 (87%), Gaps = 3/455 (0%)
Query: 83 FVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQ 142
FV+WFREAWPY+ HRG TFVV+ISGE+V+ P+LD IL+DI+ LH LGI+FVLVPGTHVQ
Sbjct: 1 FVRWFREAWPYIQGHRGSTFVVVISGEVVAGPHLDNILQDISLLHGLGIKFVLVPGTHVQ 60
Query: 143 IDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSS 202
IDKLL+ERG E KY+G YRITDS +L A+MEAAG IR+MIEAKLSPGP I N+RRHGD+S
Sbjct: 61 IDKLLAERGREPKYVGAYRITDSAALQASMEAAGKIRVMIEAKLSPGPSIPNLRRHGDNS 120
Query: 203 RWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYS 262
RWHEVGVSVASGNFLAAKR+GVV+GVD+GATGEVKK+DV+R++ERLD C+V+LSNLGYS
Sbjct: 121 RWHEVGVSVASGNFLAAKRRGVVNGVDFGATGEVKKIDVSRIKERLDSNCIVLLSNLGYS 180
Query: 263 SSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQRVKQ 322
SSGEVLNCNTYEVATACALAI ADKLICI+DGPILDE+G LIRF+TL+EAD LIR+R KQ
Sbjct: 181 SSGEVLNCNTYEVATACALAIGADKLICIVDGPILDENGRLIRFMTLEEADMLIRKRAKQ 240
Query: 323 SEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIAT--FNNGVGFDNGNGLW 380
SEIAANYVKAV ED + DS+ + + NG+ F AT F NGVGFDNGNGL
Sbjct: 241 SEIAANYVKAVGGEDYSYSLGLDSVNTTPFNNNGRGFWGSGSATDSFQNGVGFDNGNGL- 299
Query: 381 SSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMG 440
S EQGFAIGG+ERLSRLNGYLSELAAAAFVCR GVQRVHLLDGTI GVLLLELF RDGMG
Sbjct: 300 SGEQGFAIGGEERLSRLNGYLSELAAAAFVCRGGVQRVHLLDGTIEGVLLLELFTRDGMG 359
Query: 441 TMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQII 500
TM+ASD+YEGTR A+V DL+GI+QII+PL ESG LVRRTDEELL+ALDSF VVEREG II
Sbjct: 360 TMIASDMYEGTRMARVEDLAGIRQIIRPLEESGILVRRTDEELLRALDSFVVVEREGSII 419
Query: 501 ACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLL 535
ACAALFPFF+EKCGEVAAI VSPECRGQGQGDKLL
Sbjct: 420 ACAALFPFFEEKCGEVAAIAVSPECRGQGQGDKLL 454
|
Length = 515 |
| >gnl|CDD|239770 cd04237, AAK_NAGS-ABP, AAK_NAGS-ABP: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the arginine-biosynthesis pathway (ABP) found in gamma- and beta-proteobacteria and higher plant chloroplasts | Back alignment and domain information |
|---|
Score = 348 bits (895), Expect = e-117
Identities = 125/255 (49%), Positives = 163/255 (63%), Gaps = 10/255 (3%)
Query: 82 QFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHV 141
QFV WFREA PY+ AHRG TFV+ GE V+ P D I+ DIA LH LGIR VLV G
Sbjct: 1 QFVDWFREAAPYINAHRGKTFVIAFGGEAVAHPNFDNIVHDIALLHSLGIRLVLVHGARP 60
Query: 142 QIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDS 201
QID+ L+ERG E +Y RITD+ +L EAAG +R+ IEA LS G P +
Sbjct: 61 QIDQRLAERGLEPRYHRGLRITDAAALECVKEAAGAVRLEIEALLSMGLPNSPMAG---- 116
Query: 202 SRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGY 261
+ V SGNF+ A+ GVVDGVD+G TGEV+++D +R +LD G +V+LS LGY
Sbjct: 117 -----ARIRVVSGNFVTARPLGVVDGVDFGHTGEVRRIDADAIRRQLDQGSIVLLSPLGY 171
Query: 262 SSSGEVLNCNTYEVATACALAIEADKLICIIDGP-ILDESGHLIRFLTLQEADSLIRQRV 320
S +GEV N + +VATA A+A++ADKLI + DGP +LD+ G LIR LT QEA++L+
Sbjct: 172 SPTGEVFNLSMEDVATAVAIALKADKLIFLTDGPGLLDDDGELIRELTAQEAEALLETGA 231
Query: 321 KQSEIAANYVKAVAE 335
+ A ++A E
Sbjct: 232 LLTNDTARLLQAAIE 246
|
Domain architecture of these NAGS consisted of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal NAG synthase, acetyltransferase (ArgA) domain. Both bacterial and plant sequences in this CD have a conserved N-terminal extension; a similar sequence in the NAG kinases of the cyclic arginine-biosynthesis pathway has been implicated in feedback inhibition sensing. Plant sequences also have an N-terminal chloroplast transit peptide and an insert (approx. 70 residues) in the C-terminal region of ArgB. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK). Length = 280 |
| >gnl|CDD|235386 PRK05279, PRK05279, N-acetylglutamate synthase; Validated | Back alignment and domain information |
|---|
Score = 252 bits (647), Expect = 8e-78
Identities = 106/241 (43%), Positives = 146/241 (60%), Gaps = 16/241 (6%)
Query: 82 QFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHV 141
+FV WFR + PY+ AHRG TFV+++ GE ++ I+ DIA LH LGIR VLV G
Sbjct: 8 EFVDWFRHSAPYINAHRGKTFVIMLGGEAIAHGNFSNIVHDIALLHSLGIRLVLVHGARP 67
Query: 142 QIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLS---PGPPICNIRRH 198
QI++ L+ RG E +Y R+TD+ +L +AAG +R+ IEA+LS P P+
Sbjct: 68 QIEEQLAARGIEPRYHKGLRVTDAAALECVKQAAGELRLDIEARLSMGLPNTPMAGAH-- 125
Query: 199 GDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSN 258
+ V SGNF+ A+ GV DGVDY TGEV+++D +R +LD G +V+LS
Sbjct: 126 ----------IRVVSGNFVTARPLGVDDGVDYQHTGEVRRIDAEAIRRQLDSGAIVLLSP 175
Query: 259 LGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP-ILDESGHLIRFLTLQEADSLIR 317
LGYS +GE N EVAT A+A++ADKLI + +LDE G LIR L+ EA +L+
Sbjct: 176 LGYSPTGESFNLTMEEVATQVAIALKADKLIFFTESQGVLDEDGELIRELSPNEAQALLE 235
Query: 318 Q 318
Sbjct: 236 A 236
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Length = 441 |
| >gnl|CDD|233620 TIGR01890, N-Ac-Glu-synth, amino-acid N-acetyltransferase | Back alignment and domain information |
|---|
Score = 198 bits (506), Expect = 1e-57
Identities = 108/258 (41%), Positives = 150/258 (58%), Gaps = 20/258 (7%)
Query: 83 FVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQ 142
FV WFREA PY+ AHRG TFVV + GE+V L I+ DIA LH LG+R VLV G Q
Sbjct: 1 FVAWFREAAPYINAHRGKTFVVGLGGELVEGGNLGNIVADIALLHSLGVRLVLVHGARPQ 60
Query: 143 IDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLS---PGPPICNIRRHG 199
I+++L+ RG Y R+TD SL A +AAG +R+ IEA+LS P+ R
Sbjct: 61 IERILAARGRTPHYHRGLRVTDEASLEQAQQAAGTLRLAIEARLSMSLSNTPMAGSR--- 117
Query: 200 DSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL 259
+ V SGNF+ A+ GV++GVDY TG ++K+D +R +LD G +V+LS L
Sbjct: 118 ---------LPVVSGNFVTARPIGVIEGVDYEHTGVIRKIDTEGIRRQLDAGSIVLLSPL 168
Query: 260 GYSSSGEVLNCNTYEVATACALAIEADKLI--CIIDGPILDESGHLIRFLTLQEADSLIR 317
G+S +GE N + +VAT+ A++++ADKLI + G I D G L L+ QE +SL
Sbjct: 169 GHSPTGETFNLDMEDVATSVAISLKADKLIYFTLSPG-ISDPDGTLAAELSPQEVESLAE 227
Query: 318 QRVKQSEIAANYVKAVAE 335
+ SE + A +
Sbjct: 228 R--LGSETTRRLLSAAVK 243
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This model represents a clade of amino-acid N-acetyltransferases acting mainly on glutamate in the first step of the "acetylated" ornithine biosynthesis pathway. For this reason it is also called N-acetylglutamate synthase. The enzyme may also act on aspartate [Amino acid biosynthesis, Glutamate family]. Length = 429 |
| >gnl|CDD|223622 COG0548, ArgB, Acetylglutamate kinase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 163 bits (414), Expect = 3e-46
Identities = 80/227 (35%), Positives = 120/227 (52%), Gaps = 20/227 (8%)
Query: 98 RGGTFVVIISGEIVSSPYL-DPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKY 156
RG T V+ + G + L + DIA L +GIR V+V G QID++L++ G E ++
Sbjct: 1 RGKTIVIKLGGSAMEDENLLEAFASDIALLKSVGIRPVVVHGGGPQIDEMLAKLGIEPEF 60
Query: 157 LGRYRITDSESLAAAMEAAGG-IRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGN 215
+ R+TD+E+L GG + I A+LS +HG + VG+S GN
Sbjct: 61 VKGLRVTDAETLEVVEMVLGGTVNKEIVARLS---------KHGGQA----VGLSGVDGN 107
Query: 216 FLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEV 275
+ AK+ V DGVD G GE++KV+ + LD G + +++ + GE LN N
Sbjct: 108 LVTAKKLDVDDGVDLGYVGEIRKVNPELIERLLDNGAIPVIAPIAVDEDGETLNVNADTA 167
Query: 276 ATACALAIEADKLI--CIIDGPILDESGH--LIRFLTLQEADSLIRQ 318
A A A A++A+KLI + G +LD+ G LI L +EA+ LI Q
Sbjct: 168 AGALAAALKAEKLILLTDVPG-VLDDKGDPSLISELDAEEAEELIEQ 213
|
Length = 265 |
| >gnl|CDD|235386 PRK05279, PRK05279, N-acetylglutamate synthase; Validated | Back alignment and domain information |
|---|
Score = 161 bits (410), Expect = 1e-43
Identities = 66/132 (50%), Positives = 90/132 (68%)
Query: 404 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIK 463
L AA CR GV+R HL+ G LL ELF RDG+GTM+ + E R A + D+ GI
Sbjct: 250 LRAAVKACRGGVRRSHLISYAEDGALLQELFTRDGIGTMIVMESLEQLRRATIDDVGGIL 309
Query: 464 QIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSP 523
++I+PL E G LVRR+ E+L + +D F V+ER+G II CAAL+PF +EK GE+A + V P
Sbjct: 310 ELIRPLEEQGILVRRSREQLEREIDKFTVIERDGLIIGCAALYPFPEEKMGEMACLAVHP 369
Query: 524 ECRGQGQGDKLL 535
+ RG G+G++LL
Sbjct: 370 DYRGSGRGERLL 381
|
Length = 441 |
| >gnl|CDD|233620 TIGR01890, N-Ac-Glu-synth, amino-acid N-acetyltransferase | Back alignment and domain information |
|---|
Score = 139 bits (351), Expect = 7e-36
Identities = 64/146 (43%), Positives = 91/146 (62%), Gaps = 6/146 (4%)
Query: 390 GQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYE 449
G E RL L+AA CR GV R H++ G LL ELF RDG+GT ++ + +E
Sbjct: 230 GSETTRRL------LSAAVKACRGGVHRSHIVSYAEDGSLLQELFTRDGIGTSISKEAFE 283
Query: 450 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFF 509
R A + D+ GI +I+PL E G LVRR+ E L + + F ++E +G II CAAL+P+
Sbjct: 284 SIRQATIDDIGGIAALIRPLEEQGILVRRSREYLEREISEFSIIEHDGNIIGCAALYPYA 343
Query: 510 KEKCGEVAAIGVSPECRGQGQGDKLL 535
+E CGE+A + VSPE + G+G++LL
Sbjct: 344 EEDCGEMACLAVSPEYQDGGRGERLL 369
|
This model represents a clade of amino-acid N-acetyltransferases acting mainly on glutamate in the first step of the "acetylated" ornithine biosynthesis pathway. For this reason it is also called N-acetylglutamate synthase. The enzyme may also act on aspartate [Amino acid biosynthesis, Glutamate family]. Length = 429 |
| >gnl|CDD|239771 cd04238, AAK_NAGK-like, AAK_NAGK-like: N-Acetyl-L-glutamate kinase (NAGK)-like | Back alignment and domain information |
|---|
Score = 111 bits (280), Expect = 1e-27
Identities = 62/220 (28%), Positives = 103/220 (46%), Gaps = 17/220 (7%)
Query: 102 FVVIISGEIVSSPYLDP-ILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRY 160
V+ G + L DI L +GI V+V G +I++LL G E++++
Sbjct: 1 VVIKYGGSAMKDEELKEAFADDIVLLKQVGINPVIVHGGGPEINELLKRLGIESEFVNGL 60
Query: 161 RITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAK 220
R+TD E++ G + +L + R G + VG+S G + A+
Sbjct: 61 RVTDKETMEIVEMVLAGK---VNKELVS-----LLNRAGGKA----VGLSGKDGGLIKAE 108
Query: 221 RKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACA 280
+K +D G GEV +V+ + L+ G + +++ + GE N N A A A
Sbjct: 109 KK-EEKDIDLGFVGEVTEVNPELLETLLEAGYIPVIAPIAVDEDGETYNVNADTAAGAIA 167
Query: 281 LAIEADKLICI--IDGPILDESGHLIRFLTLQEADSLIRQ 318
A++A+KLI + + G +LD+ G LI LT +EA+ LI
Sbjct: 168 AALKAEKLILLTDVPG-VLDDPGSLISELTPKEAEELIED 206
|
Included in this CD are the Escherichia coli and Pseudomonas aeruginosa type NAGKs which catalyze the phosphorylation of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in bacteria and photosynthetic organisms using either the acetylated, noncyclic (NC), or non-acetylated, cyclic (C) route of ornithine biosynthesis. Also included in this CD is a distinct group of uncharacterized (UC) bacterial and archeal NAGKs. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK). Length = 256 |
| >gnl|CDD|234869 PRK00942, PRK00942, acetylglutamate kinase; Provisional | Back alignment and domain information |
|---|
Score = 110 bits (279), Expect = 4e-27
Identities = 76/235 (32%), Positives = 115/235 (48%), Gaps = 18/235 (7%)
Query: 89 EAWPYLWAHRGGTFVVIISGEIVSSPYLDP-ILKDIAFLHHLGIRFVLVPGTHVQIDKLL 147
EA PY+ G T V+ G ++ L +DI L +GI V+V G QID+LL
Sbjct: 13 EALPYIQRFMGKTIVIKYGGNAMTDEELKEAFARDIVLLKQVGINPVVVHGGGPQIDELL 72
Query: 148 SERGHEAKYLGRYRITDSESLA-AAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHE 206
+ G E++++ R+TD+E++ M AG + + + I +HG +
Sbjct: 73 KKLGIESEFVNGLRVTDAETMEVVEMVLAGKVNKELVSL---------INKHGGKA---- 119
Query: 207 VGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGE 266
VG+S G + AK+ + D G GEV V+ + L+ G + ++S +G GE
Sbjct: 120 VGLSGKDGGLITAKKLE--EDEDLGFVGEVTPVNPALLEALLEAGYIPVISPIGVGEDGE 177
Query: 267 VLNCNTYEVATACALAIEADKLICIIDGP-ILDESGHLIRFLTLQEADSLIRQRV 320
N N A A A A+ A+KLI + D P +LD+ G LI LT EA+ LI V
Sbjct: 178 TYNINADTAAGAIAAALGAEKLILLTDVPGVLDDKGQLISELTASEAEELIEDGV 232
|
Length = 283 |
| >gnl|CDD|233118 TIGR00761, argB, acetylglutamate kinase | Back alignment and domain information |
|---|
Score = 103 bits (259), Expect = 5e-25
Identities = 68/222 (30%), Positives = 109/222 (49%), Gaps = 19/222 (8%)
Query: 102 FVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYR 161
+VI G S L+ DIAFL +GI+ V+V G +I++LL G ++ R
Sbjct: 1 TIVIKIGGAAISDLLEAFASDIAFLRAVGIKPVIVHGGGPEINELLEALGIPPEFKNGLR 60
Query: 162 ITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAK 220
+TD E+L M G + + A L +HG ++ +G++ G A+
Sbjct: 61 VTDKETLEVVEMVLIGQVNKELVALL---------NKHGINA----IGLTGGDGQLFTAR 107
Query: 221 RKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACA 280
+D D G GE+KKV+ + L G + ++S+L ++ G+ LN N A A A
Sbjct: 108 Y---LDKEDLGYVGEIKKVNKALIEALLKAGYIPVISSLALTAEGQALNVNADTAAGALA 164
Query: 281 LAIEADKLICIIDGP-ILDESG-HLIRFLTLQEADSLIRQRV 320
A+ A+KL+ + D P IL+ G LI + L E + LI+Q +
Sbjct: 165 AALGAEKLVLLTDVPGILNGDGQSLISEIPLDEIEQLIKQGI 206
|
This model describes N-acetylglutamate kinases (ArgB) of many prokaryotes and the N-acetylglutamate kinase domains of multifunctional proteins from yeasts. This enzyme is the second step in the "acetylated" ornithine biosynthesis pathway. A related group of enzymes representing the first step of the pathway contain a homologous domain and are excluded from this model [Amino acid biosynthesis, Glutamate family]. Length = 231 |
| >gnl|CDD|239783 cd04250, AAK_NAGK-C, AAK_NAGK-C: N-Acetyl-L-glutamate kinase - cyclic (NAGK-C) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in some bacteria and photosynthetic organisms using the non-acetylated, cyclic route of ornithine biosynthesis | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 1e-23
Identities = 72/242 (29%), Positives = 121/242 (50%), Gaps = 28/242 (11%)
Query: 89 EAWPYLWAHRGGTFVVIISGEIVSSPYL-DPILKDIAFLHHLGIRFVLVPGTHVQIDKLL 147
EA PY+ RG T V+ G + L + +DI L ++GI V+V G +I+++L
Sbjct: 4 EALPYIQKFRGKTVVIKYGGNAMKDEELKESFARDIVLLKYVGINPVVVHGGGPEINEML 63
Query: 148 SERGHEAKYLGRYRITDSESLAAAMEAAGGIRMM----IEAKLSPGPPICNIRRHGDSSR 203
+ G E++++ R+TD E ME M+ + ++ + I R G +
Sbjct: 64 KKLGIESEFVNGLRVTDEE----TMEIV---EMVLVGKVNKEI-----VSLINRAGGKA- 110
Query: 204 WHEVGVSVASGNFLAAKRK---GVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLG 260
VG+S GN + AK+K + + +D G GEV +V+ + L+ G + +++ +G
Sbjct: 111 ---VGLSGKDGNLIKAKKKDATVIEEIIDLGFVGEVTEVNPELLETLLEAGYIPVIAPVG 167
Query: 261 YSSSGEVLNCNTYEVATACALAIEADKLICIIDGP-ILDE---SGHLIRFLTLQEADSLI 316
GE N N A A A A++A+KLI + D +LD+ G LI ++L+EA+ LI
Sbjct: 168 VGEDGETYNINADTAAGAIAAALKAEKLILLTDVAGVLDDPNDPGSLISEISLKEAEELI 227
Query: 317 RQ 318
Sbjct: 228 AD 229
|
In this pathway, glutamate is first N-acetylated and then phosphorylated by NAGK to give phosphoryl NAG, which is converted to NAG-ornithine. There are two variants of this pathway. In one, typified by the pathway in Thermotoga maritima and Pseudomonas aeruginosa, the acetyl group is recycled by reversible transacetylation from acetylornithine to glutamate. The phosphorylation of NAG by NAGK is feedback inhibited by arginine. In photosynthetic organisms, NAGK is the target of the nitrogen-signaling protein PII. Hexameric formation of NAGK domains appears to be essential to both arginine inhibition and NAGK-PII complex formation. NAGK-C are members of the Amino Acid Kinase Superfamily (AAK). Length = 279 |
| >gnl|CDD|224167 COG1246, ArgA, N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 94.3 bits (235), Expect = 1e-22
Identities = 35/85 (41%), Positives = 60/85 (70%)
Query: 451 TRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFK 510
R A+++D+ I ++I+PL G L+RR+ E+L + +D F ++ER+G++I CAAL P +
Sbjct: 3 IRKARISDIPAILELIRPLELQGILLRRSREQLEEEIDDFTIIERDGKVIGCAALHPVLE 62
Query: 511 EKCGEVAAIGVSPECRGQGQGDKLL 535
E GE+ ++ V P+ RG G+G++LL
Sbjct: 63 EDLGELRSLAVHPDYRGSGRGERLL 87
|
Length = 153 |
| >gnl|CDD|178128 PLN02512, PLN02512, acetylglutamate kinase | Back alignment and domain information |
|---|
Score = 88.6 bits (220), Expect = 3e-19
Identities = 66/234 (28%), Positives = 111/234 (47%), Gaps = 21/234 (8%)
Query: 89 EAWPYLWAHRGGTFVVIISGEIVSSPYL-DPILKDIAFLHHLGIRFVLVPGTHVQIDKLL 147
EA P++ RG T VV G + P L +++D+ L +G+R VLV G +I+ L
Sbjct: 37 EALPFIQRFRGKTVVVKYGGAAMKDPELKAGVIRDLVLLSCVGLRPVLVHGGGPEINSWL 96
Query: 148 SERGHEAKYLGRYRITDSESL-AAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHE 206
+ G E ++ R+TD+E++ M G + + + I + G ++
Sbjct: 97 KKVGIEPQFKNGLRVTDAETMEVVEMVLVGKVNKSLVSL---------INKAGGTA---- 143
Query: 207 VGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGE 266
VG+S G L A+ + D G GEV +VD T +R +D G + +++ + G+
Sbjct: 144 VGLSGKDGRLLRARPS--PNSADLGFVGEVTRVDPTVLRPLVDDGHIPVIATVAADEDGQ 201
Query: 267 VLNCNTYEVATACALAIEADKLICIIDGP-IL---DESGHLIRFLTLQEADSLI 316
N N A A A+ A+KLI + D +L D+ G L++ L ++ LI
Sbjct: 202 AYNINADTAAGEIAAALGAEKLILLTDVAGVLEDKDDPGSLVKELDIKGVRKLI 255
|
Length = 309 |
| >gnl|CDD|239785 cd04252, AAK_NAGK-fArgBP, AAK_NAGK-fArgBP: N-Acetyl-L-glutamate kinase (NAGK) of the fungal arginine-biosynthetic pathway (fArgBP) | Back alignment and domain information |
|---|
Score = 82.0 bits (203), Expect = 1e-17
Identities = 62/232 (26%), Positives = 110/232 (47%), Gaps = 29/232 (12%)
Query: 103 VVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRI 162
V+ + G I+ LD + ++FL H+G+ ++V G Q+++ L G E +Y+ R+
Sbjct: 2 VIKVGGAIIED-DLDELAASLSFLQHVGLYPIVVHGAGPQLNEELEAAGVEPEYVDGLRV 60
Query: 163 TDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRK 222
TD E + A + + KL + + R+G +R + SG F A
Sbjct: 61 TDPE----TLAVARKVFLEENLKL-----VEALERNGARAR------PITSGVFEAE--- 102
Query: 223 GVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALA 282
+D YG G++ V+ + + G L IL++L + SG++LN N A A
Sbjct: 103 -YLDKDKYGLVGKITGVNKAPIEAAIRAGYLPILTSLAETPSGQLLNVNADVAAGELARV 161
Query: 283 IEADKLICIID-GPILDESGHLIRFLTL-QEADSLIRQ-------RVKQSEI 325
+E K++ + + G +LD +G I + L +E D L++Q ++K EI
Sbjct: 162 LEPLKIVFLNETGGLLDGTGKKISAINLDEEYDDLMKQPWVKYGTKLKIKEI 213
|
The nuclear-encoded, mitochondrial polyprotein precursor with an N-terminal NAGK (ArgB) domain (this CD), a central DUF619 domain, and a C-terminal reductase domain (ArgC, N-Acetylglutamate Phosphate Reductase, NAGPR). The precursor is cleaved in the mitochondria into two distinct enzymes (NAGK-DUF619 and NAGPR). Native molecular weights of these proteins indicate that the kinase is an octamer whereas the reductase is a dimer. This CD also includes some gamma-proteobacteria (Xanthomonas and Xylella) NAG kinases with an N-terminal NAGK (ArgB) domain (this CD) and a C-terminal DUF619 domain. The DUF619 domain is described as a putative distant homolog of the acetyltransferase, ArgA, predicted to function in NAG synthase association in fungi. Eukaryotic sequences have an N-terminal mitochondrial transit peptide. Members of this NAG kinase domain CD belong to the Amino Acid Kinase Superfamily (AAK). Length = 248 |
| >gnl|CDD|133644 CHL00202, argB, acetylglutamate kinase; Provisional | Back alignment and domain information |
|---|
Score = 82.1 bits (203), Expect = 3e-17
Identities = 64/243 (26%), Positives = 112/243 (46%), Gaps = 22/243 (9%)
Query: 84 VKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDP-ILKDIAFLHHLGIRFVLVPGTHVQ 142
V+ EA PY+ RG V+ G + + L I+KDI FL +G++ V+V G +
Sbjct: 8 VQVLSEALPYIQKFRGRIMVIKYGGAAMKNLILKADIIKDILFLSCIGLKIVVVHGGGPE 67
Query: 143 IDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSS 202
I+ L + K+ R+TD + ME + M++ K++ + +I +G +
Sbjct: 68 INFWLKQLNISPKFWNGIRVTDKVT----MEI---VEMVLAGKVNK-DLVGSINANGGKA 119
Query: 203 RWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYS 262
VG+ N + A+ D D G GE+++VD + L+ + +++++
Sbjct: 120 ----VGLCGKDANLIVARAS---DKKDLGLVGEIQQVDPQLIDMLLEKNYIPVIASVAAD 172
Query: 263 SSGEVLNCNTYEVATACALAIEADKLICIIDGP-----ILDESGHLIRFLTLQEADSLIR 317
G+ N N VA A + A+KLI + D P I D + LI L ++EA +L
Sbjct: 173 HDGQTYNINADVVAGEIAAKLNAEKLILLTDTPGILADINDPNS-LISTLNIKEARNLAS 231
Query: 318 QRV 320
+
Sbjct: 232 TGI 234
|
Length = 284 |
| >gnl|CDD|239770 cd04237, AAK_NAGS-ABP, AAK_NAGS-ABP: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the arginine-biosynthesis pathway (ABP) found in gamma- and beta-proteobacteria and higher plant chloroplasts | Back alignment and domain information |
|---|
Score = 80.7 bits (200), Expect = 7e-17
Identities = 24/53 (45%), Positives = 29/53 (54%)
Query: 391 QERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 443
+ N L AA CR GV RVHL+ G LLLELF RDG+GT++
Sbjct: 228 ETGALLTNDTARLLQAAIEACRGGVPRVHLISYAEDGALLLELFTRDGVGTLI 280
|
Domain architecture of these NAGS consisted of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal NAG synthase, acetyltransferase (ArgA) domain. Both bacterial and plant sequences in this CD have a conserved N-terminal extension; a similar sequence in the NAG kinases of the cyclic arginine-biosynthesis pathway has been implicated in feedback inhibition sensing. Plant sequences also have an N-terminal chloroplast transit peptide and an insert (approx. 70 residues) in the C-terminal region of ArgB. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK). Length = 280 |
| >gnl|CDD|237599 PRK14058, PRK14058, acetylglutamate/acetylaminoadipate kinase; Provisional | Back alignment and domain information |
|---|
Score = 78.8 bits (195), Expect = 3e-16
Identities = 70/254 (27%), Positives = 114/254 (44%), Gaps = 41/254 (16%)
Query: 103 VVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYL----- 157
VV I G + P + L D+A L G R VLV G ++++LL G E +++
Sbjct: 3 VVKIGGSVGIDP--EDALIDVASLWADGERVVLVHGGSDEVNELLERLGIEPRFVTSPSG 60
Query: 158 --GRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGN 215
RY TD E+L + A I + +L + G ++ VG+S G
Sbjct: 61 VTSRY--TDRETLEVFIMAMALINKQLVERL---------QSLGVNA----VGLSGLDGG 105
Query: 216 FLAAKRKGVV----DG----VDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEV 267
L KRK V +G + TG++++V+ ++ L G L +++ S GE
Sbjct: 106 LLEGKRKKAVRVVEEGKKKIIRGDYTGKIEEVNTDLLKLLLKAGYLPVVAPPALSEEGEP 165
Query: 268 LNCNTYEVATACALAIEADKLICIIDGPIL----DESGHLIRFLTLQEADSL---IRQRV 320
LN + A A A A++A+ L+ + D P L + G LI +T +EA+ L +
Sbjct: 166 LNVDGDRAAAAIAGALKAEALVLLSDVPGLLRDPPDEGSLIERITPEEAEELSKAAGGGM 225
Query: 321 KQSEIAANYVKAVA 334
K+ + A +AV
Sbjct: 226 KKKVLMA--AEAVE 237
|
Length = 268 |
| >gnl|CDD|236088 PRK07757, PRK07757, acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 70.2 bits (173), Expect = 3e-14
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKE 511
R A+++D+ I +I + G ++ R+ +EL + + FYV E EG+I+ C AL E
Sbjct: 5 RKARLSDVKAIHALINVYAKKGLMLPRSLDELYENIRDFYVAEEEGEIVGCCALH-ILWE 63
Query: 512 KCGEVAAIGVSPECRGQGQGDKLLGLCI 539
E+ ++ VS + RGQG G L+ C+
Sbjct: 64 DLAEIRSLAVSEDYRGQGIGRMLVEACL 91
|
Length = 152 |
| >gnl|CDD|239784 cd04251, AAK_NAGK-UC, AAK_NAGK-UC: N-Acetyl-L-glutamate kinase - uncharacterized (NAGK-UC) | Back alignment and domain information |
|---|
Score = 71.2 bits (175), Expect = 9e-14
Identities = 77/249 (30%), Positives = 118/249 (47%), Gaps = 36/249 (14%)
Query: 103 VVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLG---- 158
VV I G +VS D ++ DIA + G R ++V G +++ L G E K++
Sbjct: 2 VVKIGGSVVSDL--DKVIDDIA---NFGERLIVVHGGGNYVNEYLKRLGVEPKFVTSPSG 56
Query: 159 -RYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFL 217
R R TD E+L + G I I A+L G + VG++ G L
Sbjct: 57 IRSRYTDKETLEVFVMVMGLINKKIVARL---------HSLGVKA----VGLTGLDGRLL 103
Query: 218 AAKRKGVV----DG----VDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLN 269
AKRK +V G + G TG+V+KV+ + LD G L ++S + YS GE LN
Sbjct: 104 EAKRKEIVRVNERGRKMIIRGGYTGKVEKVNSDLIEALLDAGYLPVVSPVAYSEEGEPLN 163
Query: 270 CNTYEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQEADSL---IRQRVKQSEIA 326
+ A A A A++A++LI + D L G +I +T+ +A+SL +K+ +A
Sbjct: 164 VDGDRAAAAIAAALKAERLILLTDVEGLYLDGRVIERITVSDAESLLEKAGGGMKRKLLA 223
Query: 327 ANYVKAVAE 335
A +AV
Sbjct: 224 A--AEAVEG 230
|
This domain is similar to Escherichia coli and Pseudomonas aeruginosa NAGKs which catalyze the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis. These uncharacterized domain sequences are found in some bacteria (Deinococci and Chloroflexi) and archea and belong to the Amino Acid Kinase Superfamily (AAK). Length = 257 |
| >gnl|CDD|216067 pfam00696, AA_kinase, Amino acid kinase family | Back alignment and domain information |
|---|
Score = 66.7 bits (163), Expect = 2e-12
Identities = 48/230 (20%), Positives = 90/230 (39%), Gaps = 42/230 (18%)
Query: 101 TFVVIISGEIVSSP-YLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGR 159
V+ + G ++ + + ++IA L LGI+ V+V G DKLL+ G EA ++
Sbjct: 2 RIVIKLGGSSLTDKDEIKRLAEEIAKLLALGIKVVVVSGGGGFTDKLLAAYGIEAGFVRH 61
Query: 160 YRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAA 219
L + A + ++ + R G V + ++ G A
Sbjct: 62 TAGAT--GLVLEAQLAAELNRIVVSLGE---------RLG----ARAVALLLSDGGLPAV 106
Query: 220 KRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSS----SGEVLNCNTYEV 275
+ VD ++E L+ G + +++ G + + + ++ +
Sbjct: 107 RLDL---------------VDTEAIKELLEAGVVPVITGFGGENDTGETTTLGRGSSDTL 151
Query: 276 ATACALAIEADKLICI--IDG-----PILDESGHLIRFLTLQEADSLIRQ 318
A A A+ ADKLI + +DG P + LI L+ EA+ L+
Sbjct: 152 AALLAEALGADKLIILTDVDGVYTADPRKNPDAKLIPELSYDEAEELLAA 201
|
This family includes kinases that phosphorylate a variety of amino acid substrates, as well as uridylate kinase and carbamate kinase. This family includes: Aspartokinase EC:2.7.2.4, Acetylglutamate kinase EC:2.7.2.8, Glutamate 5-kinase EC:2.7.2.11, Uridylate kinase EC:2.7.4.-, Carbamate kinase EC:2.7.2.2. Length = 230 |
| >gnl|CDD|239033 cd02115, AAK, Amino Acid Kinases (AAK) superfamily, catalytic domain; present in such enzymes like N-acetylglutamate kinase (NAGK), carbamate kinase (CK), aspartokinase (AK), glutamate-5-kinase (G5K) and UMP kinase (UMPK) | Back alignment and domain information |
|---|
Score = 66.7 bits (163), Expect = 2e-12
Identities = 63/250 (25%), Positives = 92/250 (36%), Gaps = 35/250 (14%)
Query: 103 VVIISGEIVSS-PYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYR 161
V+ G VSS L + + + L G R V+V G QI L G Y R
Sbjct: 1 VIKFGGSSVSSEERLRNLARILVKLASEGGRVVVVHGAGPQITDELLAHGELLGYARGLR 60
Query: 162 ITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKR 221
ITD E+ A A G ++I A L +HG + L +
Sbjct: 61 ITDRETDALAAMGEGMSNLLIAAAL---------EQHGIKAVP------------LDLTQ 99
Query: 222 KGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSS---GEVLNCNTYEVATA 278
G + G G++ KV R++ L+ G L ILS G + G + + A
Sbjct: 100 AGFASP-NQGHVGKITKVSTDRLKSLLENGILPILSGFGGTDEKETGTLGRGGSDSTAAL 158
Query: 279 CALAIEADKLICI--IDG-----PILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVK 331
A A++AD+L+ + +DG P L+ LT +EA L + A
Sbjct: 159 LAAALKADRLVILTDVDGVYTADPRKVPDAKLLSELTYEEAAELAYAGAMVLKPKA--AD 216
Query: 332 AVAEEDITCF 341
A I
Sbjct: 217 PAARAGIPVR 226
|
The AAK superfamily includes kinases that phosphorylate a variety of amino acid substrates. These kinases catalyze the formation of phosphoric anhydrides, generally with a carboxylate, and use ATP as the source of the phosphoryl group; are involved in amino acid biosynthesis. Some of these kinases control the process via allosteric feed-back inhibition. Length = 248 |
| >gnl|CDD|239782 cd04249, AAK_NAGK-NC, AAK_NAGK-NC: N-Acetyl-L-glutamate kinase - noncyclic (NAGK-NC) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis using the acetylated, noncyclic route of ornithine biosynthesis | Back alignment and domain information |
|---|
Score = 55.9 bits (135), Expect = 1e-08
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 207 VGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGE 266
VG+S+A G A + GA G+ D + + + L G L I+S++G G+
Sbjct: 96 VGLSLADGGMTAVT----QLDPELGAVGKATANDPSLLNDLLKAGFLPIISSIGADDQGQ 151
Query: 267 VLNCNTYEVATACALAIEADKLICIIDGP-ILDESGHLIRFLTLQEADSLIRQRV 320
++N N + ATA A + AD L+ + D +LD LI L ++A LI Q V
Sbjct: 152 LMNVNADQAATAIAQLLNAD-LVLLSDVSGVLDADKQLISELNAKQAAELIEQGV 205
|
There are two variants of this pathway. In one, typified by the pathway in Escherichia coli, glutamate is acetylated by acetyl-CoA and acetylornithine is deacylated hydrolytically. In this pathway, feedback inhibition by arginine occurs at the initial acetylation of glutamate and not at the phosphorylation of NAG by NAGK. Homodimeric NAGK-NC are members of the Amino Acid Kinase Superfamily (AAK). Length = 252 |
| >gnl|CDD|223622 COG0548, ArgB, Acetylglutamate kinase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 53.7 bits (130), Expect = 7e-08
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 9/62 (14%)
Query: 383 EQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTM 442
EQG GG + AA GV+RVH++ G + LLLELF RDG+GTM
Sbjct: 212 EQGIITGGMIPK---------VEAALEALESGVRRVHIISGRVPHSLLLELFTRDGIGTM 262
Query: 443 VA 444
+
Sbjct: 263 IV 264
|
Length = 265 |
| >gnl|CDD|236132 PRK07922, PRK07922, N-acetylglutamate synthase; Validated | Back alignment and domain information |
|---|
Score = 51.8 bits (125), Expect = 9e-08
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVERE-GQIIACAALFPFFK 510
R A+ +D+ IK+++ P + L+ + L +A+ F+V E G+++ C AL +
Sbjct: 9 RRARTSDVPAIKRLVDPYAQGRILLEKNLVTLYEAVQEFWVAEHLDGEVVGCGALHVMW- 67
Query: 511 EKCGEVAAIGVSPECRGQGQGDKLLG 536
E E+ + V P RG+G G ++
Sbjct: 68 EDLAEIRTVAVDPAARGRGVGHAIVE 93
|
Length = 169 |
| >gnl|CDD|183425 PRK12308, PRK12308, bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional | Back alignment and domain information |
|---|
Score = 54.0 bits (130), Expect = 2e-07
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 9/103 (8%)
Query: 433 LFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYV 492
L RD G V R A++TD+ I+ ++ G + R+ EL++ + SF V
Sbjct: 456 LAARDTSGVKV--------RPARLTDIDAIEGMVAYWAGLGENLPRSRNELVRDIGSFAV 507
Query: 493 VEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLL 535
E G++ CA+L+ + E+ ++GV + QGQG L+
Sbjct: 508 AEHHGEVTGCASLY-IYDSGLAEIRSLGVEAGWQVQGQGSALV 549
|
Length = 614 |
| >gnl|CDD|222185 pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain | Back alignment and domain information |
|---|
Score = 47.2 bits (113), Expect = 5e-07
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 488 DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCI 539
+ F V +G+I+ L P + + + V PE RGQG G KLL +
Sbjct: 3 EHFLVAYDDGEIVGFLRLRPI--GEGAYIGGVAVDPEYRGQGYGSKLLRHLL 52
|
This domain catalyzes N-acetyltransferase reactions. Length = 79 |
| >gnl|CDD|173926 cd04301, NAT_SF, N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 2e-06
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 490 FYVVEREGQIIACAALFPF-FKEKCGEVAAIGVSPECRGQGQGDKLLGLCI 539
F V E +G+I+ A+L P + + V PE RG+G G LL
Sbjct: 1 FLVAEDDGEIVGFASLSPDGSGGDTAYIGDLAVLPEYRGKGIGSALLEAAE 51
|
NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, ranging from bacterial antibiotic resistance to circadian rhythms in mammals. Members include GCN5-related N-Acetyltransferases (GNAT) such as Aminoglycoside N-acetyltransferases, Histone N-acetyltransferase (HAT) enzymes, and Serotonin N-acetyltransferase, which catalyze the transfer of an acetyl group to a substrate. The kinetic mechanism of most GNATs involves the ordered formation of a ternary complex: the reaction begins with Acetyl Coenzyme A (AcCoA) binding, followed by binding of substrate, then direct transfer of the acetyl group from AcCoA to the substrate, followed by product and subsequent CoA release. Other family members include Arginine/ornithine N-succinyltransferase, Myristoyl-CoA: protein N-myristoyltransferase, and Acyl-homoserinelactone synthase which have a similar catalytic mechanism but differ in types of acyl groups transferred. Leucyl/phenylalanyl-tRNA-protein transferase and FemXAB nonribosomal peptidyltransferases which catalyze similar peptidyltransferase reactions are also included. Length = 65 |
| >gnl|CDD|235306 PRK04531, PRK04531, acetylglutamate kinase; Provisional | Back alignment and domain information |
|---|
Score = 49.7 bits (119), Expect = 3e-06
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 241 VTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICI-IDGPILDE 299
V + L G + ++++LG + SG++LN N A A++ K+I + G +LD
Sbjct: 119 VEAVESSLRAGSIPVIASLGETPSGQILNINADVAANELVSALQPYKIIFLTGTGGLLDA 178
Query: 300 SGHLIRFLTLQ-EADSLIRQ 318
G LI + L E D L++Q
Sbjct: 179 DGKLISSINLSTEYDHLMQQ 198
|
Length = 398 |
| >gnl|CDD|234869 PRK00942, PRK00942, acetylglutamate kinase; Provisional | Back alignment and domain information |
|---|
Score = 45.1 bits (108), Expect = 4e-05
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 404 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446
+ AA R GV+ VH++DG + LLLELF +G+GTM+ D
Sbjct: 241 VEAALDAARGGVRSVHIIDGRVPHALLLELFTDEGIGTMIVPD 283
|
Length = 283 |
| >gnl|CDD|239771 cd04238, AAK_NAGK-like, AAK_NAGK-like: N-Acetyl-L-glutamate kinase (NAGK)-like | Back alignment and domain information |
|---|
Score = 44.8 bits (107), Expect = 5e-05
Identities = 18/40 (45%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 404 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 443
AA + GV++VH++DG + LLLELF +G+GTM+
Sbjct: 218 EAALEAL-EGGVRKVHIIDGRVPHSLLLELFTDEGIGTMI 256
|
Included in this CD are the Escherichia coli and Pseudomonas aeruginosa type NAGKs which catalyze the phosphorylation of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in bacteria and photosynthetic organisms using either the acetylated, noncyclic (NC), or non-acetylated, cyclic (C) route of ornithine biosynthesis. Also included in this CD is a distinct group of uncharacterized (UC) bacterial and archeal NAGKs. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK). Length = 256 |
| >gnl|CDD|239783 cd04250, AAK_NAGK-C, AAK_NAGK-C: N-Acetyl-L-glutamate kinase - cyclic (NAGK-C) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in some bacteria and photosynthetic organisms using the non-acetylated, cyclic route of ornithine biosynthesis | Back alignment and domain information |
|---|
Score = 44.4 bits (106), Expect = 8e-05
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 404 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 443
+ A GV+ H++DG + LLLE+F +G+GTM+
Sbjct: 240 VEACIEALEGGVKAAHIIDGRVPHSLLLEIFTDEGIGTMI 279
|
In this pathway, glutamate is first N-acetylated and then phosphorylated by NAGK to give phosphoryl NAG, which is converted to NAG-ornithine. There are two variants of this pathway. In one, typified by the pathway in Thermotoga maritima and Pseudomonas aeruginosa, the acetyl group is recycled by reversible transacetylation from acetylornithine to glutamate. The phosphorylation of NAG by NAGK is feedback inhibited by arginine. In photosynthetic organisms, NAGK is the target of the nitrogen-signaling protein PII. Hexameric formation of NAGK domains appears to be essential to both arginine inhibition and NAGK-PII complex formation. NAGK-C are members of the Amino Acid Kinase Superfamily (AAK). Length = 279 |
| >gnl|CDD|216007 pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 9e-05
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 493 VEREGQIIACAALFPF-FKEKCGEVAAIGVSPECRGQGQGDKLLGLCI 539
E +G+++ A+L + E+ + V PE RG+G G LL
Sbjct: 1 AEEDGELVGFASLSIIDEEGNVAEIEGLAVDPEYRGKGIGTALLEALE 48
|
This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins. Length = 80 |
| >gnl|CDD|222199 pfam13527, Acetyltransf_9, Acetyltransferase (GNAT) domain | Back alignment and domain information |
|---|
Score = 39.1 bits (92), Expect = 9e-04
Identities = 20/94 (21%), Positives = 33/94 (35%), Gaps = 12/94 (12%)
Query: 452 RTAKVTDLSGIKQIIQP--LVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPF- 508
R DL ++++ VE L +G+++ AL+PF
Sbjct: 3 RPLTEDDLDEFLELLEYAFQVEDSPAEIWEYFRPLLEEGRVLGAFDDGKLVGQLALYPFR 62
Query: 509 -------FKEKCGEVAAIGVSPECRGQGQGDKLL 535
+ G + + PE RG+G KLL
Sbjct: 63 LNVPGKTY--PAGGITGVATYPEYRGRGLMRKLL 94
|
This domain catalyzes N-acetyltransferase reactions. Length = 127 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 585 | |||
| PLN02825 | 515 | amino-acid N-acetyltransferase | 100.0 | |
| TIGR01890 | 429 | N-Ac-Glu-synth amino-acid N-acetyltransferase. Thi | 100.0 | |
| PRK05279 | 441 | N-acetylglutamate synthase; Validated | 100.0 | |
| COG0548 | 265 | ArgB Acetylglutamate kinase [Amino acid transport | 100.0 | |
| cd04237 | 280 | AAK_NAGS-ABP AAK_NAGS-ABP: N-acetylglutamate (NAG) | 100.0 | |
| CHL00202 | 284 | argB acetylglutamate kinase; Provisional | 100.0 | |
| PLN02512 | 309 | acetylglutamate kinase | 100.0 | |
| PRK00942 | 283 | acetylglutamate kinase; Provisional | 100.0 | |
| cd04250 | 279 | AAK_NAGK-C AAK_NAGK-C: N-Acetyl-L-glutamate kinase | 100.0 | |
| KOG2436 | 520 | consensus Acetylglutamate kinase/acetylglutamate s | 100.0 | |
| PRK04531 | 398 | acetylglutamate kinase; Provisional | 100.0 | |
| cd04252 | 248 | AAK_NAGK-fArgBP AAK_NAGK-fArgBP: N-Acetyl-L-glutam | 100.0 | |
| cd04238 | 256 | AAK_NAGK-like AAK_NAGK-like: N-Acetyl-L-glutamate | 100.0 | |
| cd04236 | 271 | AAK_NAGS-Urea AAK_NAGS-Urea: N-acetylglutamate (NA | 100.0 | |
| PRK14058 | 268 | acetylglutamate/acetylaminoadipate kinase; Provisi | 100.0 | |
| cd04251 | 257 | AAK_NAGK-UC AAK_NAGK-UC: N-Acetyl-L-glutamate kina | 100.0 | |
| cd04249 | 252 | AAK_NAGK-NC AAK_NAGK-NC: N-Acetyl-L-glutamate kina | 100.0 | |
| PRK12352 | 316 | putative carbamate kinase; Reviewed | 100.0 | |
| TIGR00761 | 231 | argB acetylglutamate kinase. This model describes | 100.0 | |
| cd04241 | 252 | AAK_FomA-like AAK_FomA-like: This CD includes a fo | 100.0 | |
| PRK12686 | 312 | carbamate kinase; Reviewed | 100.0 | |
| PRK12353 | 314 | putative amino acid kinase; Reviewed | 100.0 | |
| PRK12454 | 313 | carbamate kinase-like carbamoyl phosphate syntheta | 100.0 | |
| cd02115 | 248 | AAK Amino Acid Kinases (AAK) superfamily, catalyti | 99.98 | |
| COG0263 | 369 | ProB Glutamate 5-kinase [Amino acid transport and | 99.97 | |
| TIGR00746 | 310 | arcC carbamate kinase. The seed alignment for this | 99.97 | |
| PRK09411 | 297 | carbamate kinase; Reviewed | 99.97 | |
| PF00696 | 242 | AA_kinase: Amino acid kinase family Match to Gluta | 99.97 | |
| cd04235 | 308 | AAK_CK AAK_CK: Carbamate kinase (CK) catalyzes bot | 99.97 | |
| PRK13402 | 368 | gamma-glutamyl kinase; Provisional | 99.97 | |
| PRK05429 | 372 | gamma-glutamyl kinase; Provisional | 99.97 | |
| COG0549 | 312 | ArcC Carbamate kinase [Amino acid transport and me | 99.96 | |
| cd04256 | 284 | AAK_P5CS_ProBA AAK_P5CS_ProBA: Glutamate-5-kinase | 99.96 | |
| PRK12354 | 307 | carbamate kinase; Reviewed | 99.96 | |
| TIGR01027 | 363 | proB glutamate 5-kinase. Bacterial ProB proteins h | 99.96 | |
| cd04242 | 251 | AAK_G5K_ProB AAK_G5K_ProB: Glutamate-5-kinase (G5K | 99.96 | |
| PTZ00489 | 264 | glutamate 5-kinase; Provisional | 99.96 | |
| PRK12314 | 266 | gamma-glutamyl kinase; Provisional | 99.95 | |
| cd04261 | 239 | AAK_AKii-LysC-BS AAK_AKii-LysC-BS: Amino Acid Kina | 99.95 | |
| cd04260 | 244 | AAK_AKi-DapG-BS AAK_AKi-DapG-BS: Amino Acid Kinase | 99.95 | |
| cd04246 | 239 | AAK_AK-DapG-like AAK_AK-DapG-like: Amino Acid Kina | 99.95 | |
| KOG1154 | 285 | consensus Gamma-glutamyl kinase [Amino acid transp | 99.94 | |
| COG1608 | 252 | Predicted archaeal kinase [General function predic | 99.94 | |
| TIGR01092 | 715 | P5CS delta l-pyrroline-5-carboxylate synthetase. T | 99.92 | |
| cd04234 | 227 | AAK_AK AAK_AK: Amino Acid Kinase Superfamily (AAK) | 99.92 | |
| PLN02418 | 718 | delta-1-pyrroline-5-carboxylate synthase | 99.92 | |
| PRK08210 | 403 | aspartate kinase I; Reviewed | 99.91 | |
| PRK00358 | 231 | pyrH uridylate kinase; Provisional | 99.91 | |
| cd04239 | 229 | AAK_UMPK-like AAK_UMPK-like: UMP kinase (UMPK)-lik | 99.9 | |
| PRK06635 | 404 | aspartate kinase; Reviewed | 99.9 | |
| cd04255 | 262 | AAK_UMPK-MosAB AAK_UMPK-MosAB: This CD includes th | 99.9 | |
| PRK08841 | 392 | aspartate kinase; Validated | 99.89 | |
| cd04254 | 231 | AAK_UMPK-PyrH-Ec UMP kinase (UMPK)-Ec, the microbi | 99.89 | |
| TIGR00656 | 401 | asp_kin_monofn aspartate kinase, monofunctional cl | 99.89 | |
| PRK14558 | 231 | pyrH uridylate kinase; Provisional | 99.89 | |
| PRK07431 | 587 | aspartate kinase; Provisional | 99.88 | |
| TIGR02075 | 233 | pyrH_bact uridylate kinase. This protein, also cal | 99.87 | |
| cd04253 | 221 | AAK_UMPK-PyrH-Pf AAK_UMPK-PyrH-Pf: UMP kinase (UMP | 99.87 | |
| TIGR02076 | 221 | pyrH_arch uridylate kinase, putative. This family | 99.87 | |
| TIGR00657 | 441 | asp_kinases aspartate kinase. The Lys-sensitive en | 99.82 | |
| cd04240 | 203 | AAK_UC AAK_UC: Uncharacterized (UC) amino acid kin | 99.82 | |
| PRK14557 | 247 | pyrH uridylate kinase; Provisional | 99.81 | |
| PRK14556 | 249 | pyrH uridylate kinase; Provisional | 99.77 | |
| cd04244 | 298 | AAK_AK-LysC-like AAK_AK-LysC-like: Amino Acid Kina | 99.72 | |
| COG1246 | 153 | ArgA N-acetylglutamate synthase and related acetyl | 99.69 | |
| PRK06291 | 465 | aspartate kinase; Provisional | 99.68 | |
| COG0527 | 447 | LysC Aspartokinases [Amino acid transport and meta | 99.66 | |
| PRK08373 | 341 | aspartate kinase; Validated | 99.65 | |
| COG0528 | 238 | PyrH Uridylate kinase [Nucleotide transport and me | 99.62 | |
| cd04259 | 295 | AAK_AK-DapDC AAK_AK-DapDC: Amino Acid Kinase Super | 99.57 | |
| TIGR02078 | 327 | AspKin_pair Pyrococcus aspartate kinase subunit, p | 99.52 | |
| cd04257 | 294 | AAK_AK-HSDH AAK_AK-HSDH: Amino Acid Kinase Superfa | 99.51 | |
| cd04243 | 293 | AAK_AK-HSDH-like AAK_AK-HSDH-like: Amino Acid Kina | 99.49 | |
| cd04245 | 288 | AAK_AKiii-YclM-BS AAK_AKiii-YclM-BS: Amino Acid Ki | 99.45 | |
| PRK10146 | 144 | aminoalkylphosphonic acid N-acetyltransferase; Pro | 99.44 | |
| PRK09084 | 448 | aspartate kinase III; Validated | 99.4 | |
| PRK05925 | 440 | aspartate kinase; Provisional | 99.39 | |
| PRK08961 | 861 | bifunctional aspartate kinase/diaminopimelate deca | 99.36 | |
| cd04258 | 292 | AAK_AKiii-LysC-EC AAK_AKiii-LysC-EC: Amino Acid Ki | 99.35 | |
| PRK07757 | 152 | acetyltransferase; Provisional | 99.35 | |
| PTZ00330 | 147 | acetyltransferase; Provisional | 99.34 | |
| PRK09034 | 454 | aspartate kinase; Reviewed | 99.33 | |
| PRK07922 | 169 | N-acetylglutamate synthase; Validated | 99.3 | |
| cd04247 | 306 | AAK_AK-Hom3 AAK_AK-Hom3: Amino Acid Kinase Superfa | 99.28 | |
| PRK09436 | 819 | thrA bifunctional aspartokinase I/homoserine dehyd | 99.28 | |
| PLN02551 | 521 | aspartokinase | 99.25 | |
| PLN02706 | 150 | glucosamine 6-phosphate N-acetyltransferase | 99.24 | |
| PF13527 | 127 | Acetyltransf_9: Acetyltransferase (GNAT) domain; P | 99.24 | |
| PRK12308 | 614 | bifunctional argininosuccinate lyase/N-acetylgluta | 99.2 | |
| TIGR03827 | 266 | GNAT_ablB putative beta-lysine N-acetyltransferase | 99.17 | |
| PF13673 | 117 | Acetyltransf_10: Acetyltransferase (GNAT) domain; | 99.15 | |
| COG2054 | 212 | Uncharacterized archaeal kinase related to asparto | 99.12 | |
| PRK09831 | 147 | putative acyltransferase; Provisional | 99.11 | |
| PHA00673 | 154 | acetyltransferase domain containing protein | 99.1 | |
| PRK03624 | 140 | putative acetyltransferase; Provisional | 99.09 | |
| PRK09466 | 810 | metL bifunctional aspartate kinase II/homoserine d | 99.09 | |
| KOG3216 | 163 | consensus Diamine acetyltransferase [Amino acid tr | 99.03 | |
| PF00583 | 83 | Acetyltransf_1: Acetyltransferase (GNAT) family; I | 99.01 | |
| PRK09491 | 146 | rimI ribosomal-protein-alanine N-acetyltransferase | 99.01 | |
| TIGR02382 | 191 | wecD_rffC TDP-D-fucosamine acetyltransferase. This | 98.98 | |
| TIGR02406 | 157 | ectoine_EctA L-2,4-diaminobutyric acid acetyltrans | 98.96 | |
| PRK10140 | 162 | putative acetyltransferase YhhY; Provisional | 98.93 | |
| PRK10975 | 194 | TDP-fucosamine acetyltransferase; Provisional | 98.92 | |
| PRK10514 | 145 | putative acetyltransferase; Provisional | 98.91 | |
| PRK10314 | 153 | putative acyltransferase; Provisional | 98.91 | |
| PF13508 | 79 | Acetyltransf_7: Acetyltransferase (GNAT) domain; P | 98.89 | |
| PRK01346 | 411 | hypothetical protein; Provisional | 98.89 | |
| COG3153 | 171 | Predicted acetyltransferase [General function pred | 98.88 | |
| COG1247 | 169 | Sortase and related acyltransferases [Cell envelop | 98.88 | |
| TIGR01575 | 131 | rimI ribosomal-protein-alanine acetyltransferase. | 98.87 | |
| TIGR03103 | 547 | trio_acet_GNAT GNAT-family acetyltransferase TIGR0 | 98.86 | |
| PF13420 | 155 | Acetyltransf_4: Acetyltransferase (GNAT) domain; P | 98.86 | |
| KOG3396 | 150 | consensus Glucosamine-phosphate N-acetyltransferas | 98.83 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 98.81 | |
| TIGR03448 | 292 | mycothiol_MshD mycothiol biosynthesis acetyltransf | 98.76 | |
| COG0456 | 177 | RimI Acetyltransferases [General function predicti | 98.75 | |
| PHA01807 | 153 | hypothetical protein | 98.73 | |
| PRK10562 | 145 | putative acetyltransferase; Provisional | 98.67 | |
| PRK13688 | 156 | hypothetical protein; Provisional | 98.65 | |
| PF13523 | 152 | Acetyltransf_8: Acetyltransferase (GNAT) domain; P | 98.63 | |
| cd02169 | 297 | Citrate_lyase_ligase Citrate lyase ligase. Citrate | 98.62 | |
| KOG3139 | 165 | consensus N-acetyltransferase [General function pr | 98.57 | |
| TIGR03448 | 292 | mycothiol_MshD mycothiol biosynthesis acetyltransf | 98.48 | |
| TIGR00124 | 332 | cit_ly_ligase [citrate (pro-3S)-lyase] ligase. ATP | 98.45 | |
| PRK15130 | 186 | spermidine N1-acetyltransferase; Provisional | 98.41 | |
| TIGR03585 | 156 | PseH pseudaminic acid biosynthesis N-acetyl transf | 98.38 | |
| PRK09181 | 475 | aspartate kinase; Validated | 98.3 | |
| PRK10151 | 179 | ribosomal-protein-L7/L12-serine acetyltransferase; | 98.26 | |
| cd04248 | 304 | AAK_AK-Ectoine AAK_AK-Ectoine: Amino Acid Kinase S | 98.21 | |
| PF13302 | 142 | Acetyltransf_3: Acetyltransferase (GNAT) domain; P | 98.2 | |
| cd04301 | 65 | NAT_SF N-Acyltransferase superfamily: Various enzy | 98.15 | |
| COG2153 | 155 | ElaA Predicted acyltransferase [General function p | 98.11 | |
| PRK10809 | 194 | ribosomal-protein-S5-alanine N-acetyltransferase; | 98.04 | |
| KOG3235 | 193 | consensus Subunit of the major N alpha-acetyltrans | 98.01 | |
| COG3393 | 268 | Predicted acetyltransferase [General function pred | 97.91 | |
| KOG2488 | 202 | consensus Acetyltransferase (GNAT) domain-containi | 97.8 | |
| KOG3397 | 225 | consensus Acetyltransferases [General function pre | 97.79 | |
| TIGR01211 | 522 | ELP3 histone acetyltransferase, ELP3 family. The S | 97.77 | |
| PF08445 | 86 | FR47: FR47-like protein; InterPro: IPR013653 Prote | 97.75 | |
| PF14542 | 78 | Acetyltransf_CG: GCN5-related N-acetyl-transferase | 97.71 | |
| KOG0456 | 559 | consensus Aspartate kinase [Amino acid transport a | 97.41 | |
| COG2388 | 99 | Predicted acetyltransferase [General function pred | 97.38 | |
| COG3981 | 174 | Predicted acetyltransferase [General function pred | 97.37 | |
| PF13718 | 196 | GNAT_acetyltr_2: GNAT acetyltransferase 2; PDB: 2Z | 97.1 | |
| KOG3138 | 187 | consensus Predicted N-acetyltransferase [General f | 97.1 | |
| PF04958 | 342 | AstA: Arginine N-succinyltransferase beta subunit; | 97.0 | |
| COG3053 | 352 | CitC Citrate lyase synthetase [Energy production a | 96.85 | |
| KOG3234 | 173 | consensus Acetyltransferase, (GNAT) family [Genera | 96.85 | |
| PF12568 | 128 | DUF3749: Acetyltransferase (GNAT) domain; InterPro | 96.85 | |
| PF04768 | 170 | DUF619: Protein of unknown function (DUF619); Inte | 96.75 | |
| PRK10456 | 344 | arginine succinyltransferase; Provisional | 96.75 | |
| TIGR03244 | 336 | arg_catab_AstA arginine N-succinyltransferase. In | 96.7 | |
| PF12746 | 265 | GNAT_acetyltran: GNAT acetyltransferase; PDB: 3G3S | 96.64 | |
| TIGR03245 | 336 | arg_AOST_alph arginine/ornithine succinyltransfera | 96.62 | |
| TIGR03243 | 335 | arg_catab_AOST arginine and ornithine succinyltran | 96.53 | |
| PF08444 | 89 | Gly_acyl_tr_C: Aralkyl acyl-CoA:amino acid N-acylt | 96.14 | |
| PF13480 | 142 | Acetyltransf_6: Acetyltransferase (GNAT) domain | 96.12 | |
| COG0454 | 156 | WecD Histone acetyltransferase HPA2 and related ac | 96.04 | |
| COG1670 | 187 | RimL Acetyltransferases, including N-acetylases of | 96.04 | |
| COG1444 | 758 | Predicted P-loop ATPase fused to an acetyltransfer | 95.98 | |
| KOG4144 | 190 | consensus Arylalkylamine N-acetyltransferase [Gene | 95.7 | |
| COG4552 | 389 | Eis Predicted acetyltransferase involved in intrac | 95.65 | |
| COG5630 | 495 | ARG2 Acetylglutamate synthase [Amino acid transpor | 95.16 | |
| COG3138 | 336 | AstA Arginine/ornithine N-succinyltransferase beta | 94.64 | |
| PF13880 | 70 | Acetyltransf_13: ESCO1/2 acetyl-transferase | 93.84 | |
| TIGR03694 | 241 | exosort_acyl putative PEP-CTERM/exosortase system- | 93.22 | |
| PF01853 | 188 | MOZ_SAS: MOZ/SAS family; InterPro: IPR002717 Moz i | 92.68 | |
| COG3818 | 167 | Predicted acetyltransferase, GNAT superfamily [Gen | 92.48 | |
| PF00765 | 182 | Autoind_synth: Autoinducer synthetase; InterPro: I | 89.73 | |
| PLN03238 | 290 | probable histone acetyltransferase MYST; Provision | 89.66 | |
| PRK13834 | 207 | putative autoinducer synthesis protein; Provisiona | 87.9 | |
| PF04377 | 128 | ATE_C: Arginine-tRNA-protein transferase, C termin | 86.37 | |
| PF05301 | 120 | Mec-17: Touch receptor neuron protein Mec-17; Inte | 86.34 | |
| PF06852 | 181 | DUF1248: Protein of unknown function (DUF1248); In | 86.33 | |
| PTZ00064 | 552 | histone acetyltransferase; Provisional | 86.07 | |
| COG5628 | 143 | Predicted acetyltransferase [General function pred | 86.01 | |
| cd04264 | 99 | DUF619-NAGS DUF619 domain of various N-acetylgluta | 85.84 | |
| PLN03239 | 351 | histone acetyltransferase; Provisional | 85.72 | |
| PF01233 | 162 | NMT: Myristoyl-CoA:protein N-myristoyltransferase, | 84.6 | |
| KOG4135 | 185 | consensus Predicted phosphoglucosamine acetyltrans | 84.09 | |
| PLN00104 | 450 | MYST -like histone acetyltransferase; Provisional | 82.65 | |
| cd04265 | 99 | DUF619-NAGS-U DUF619 domain of various N-acetylglu | 82.62 | |
| COG3375 | 266 | Uncharacterized conserved protein [Function unknow | 81.31 | |
| PF02799 | 190 | NMT_C: Myristoyl-CoA:protein N-myristoyltransferas | 80.97 |
| >PLN02825 amino-acid N-acetyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-92 Score=768.75 Aligned_cols=482 Identities=73% Similarity=1.136 Sum_probs=438.3
Q ss_pred HHHHHHHhhhHHHhhcCCeEEEEeCCccCCCCChHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCccC
Q 007903 83 FVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRI 162 (585)
Q Consensus 83 ~~~~~r~a~~yi~~~r~k~iVIKlGGs~l~~~~l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rv 162 (585)
||+|||+|+|||++||+||||||+||+++.++.+.+++.||++|+..|+++||||||||||++.++++|++++|++|+||
T Consensus 1 ~v~~fr~a~pYI~~~rgktfVIk~gG~~l~~~~~~~l~~DialL~~lGi~~VlVHGggpqI~~~l~~~gi~~~f~~G~RV 80 (515)
T PLN02825 1 FVRWFREAWPYIQGHRGSTFVVVISGEVVAGPHLDNILQDISLLHGLGIKFVLVPGTHVQIDKLLAERGREPKYVGAYRI 80 (515)
T ss_pred ChhHHHhhhHHHHHHCCCEEEEEECchhhcCchHHHHHHHHHHHHHCCCCEEEEcCCCHHHHHHHHHcCCCceeeCCccc
Confidence 79999999999999999999999999999887899999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHH
Q 007903 163 TDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVT 242 (585)
Q Consensus 163 t~~~~l~~~~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~ 242 (585)
||+++|+++++++|++|.+|++.|++|++|..|+++|+++|++.++|++.||||++|+|+|+++++||||+|+|++||++
T Consensus 81 Td~~~L~~~~~~~G~v~~~i~a~Ls~~~~v~~l~~~G~~a~~~~~gl~~~~Gn~v~a~~~gv~dgvD~g~vG~V~~Vd~~ 160 (515)
T PLN02825 81 TDSAALQASMEAAGKIRVMIEAKLSPGPSIPNLRRHGDNSRWHEVGVSVASGNFLAAKRRGVVNGVDFGATGEVKKIDVS 160 (515)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhccccchhHHHhcCCCCccccCceEeccCcEEEEEECCCCcCccccceeeEEEEcHH
Confidence 99999999999999999999999999999999999999999998999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCeEEEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccCCCCcccccccHHHHHHHHHhhchh
Q 007903 243 RMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQRVKQ 322 (585)
Q Consensus 243 ~I~~lL~~G~IPVi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~~~~~lI~~it~~e~~~li~~~~~~ 322 (585)
.|+.+|++|.|||++|++++++|+++|+|+|++|+++|.+|+||||||+||+++++.++++|++++.+|++++++++++|
T Consensus 161 ~i~~~L~~g~Ipvisplg~s~~Ge~~NinaD~vA~avA~aL~A~KLI~ltd~~~~~~~g~li~~l~~~e~~~li~~~~~~ 240 (515)
T PLN02825 161 RIKERLDSNCIVLLSNLGYSSSGEVLNCNTYEVATACALAIGADKLICIVDGPILDENGRLIRFMTLEEADMLIRKRAKQ 240 (515)
T ss_pred HHHHHHhCCCeEEECCceECCCCCEEeeCHHHHHHHHHHHcCCCeEEEEeCcceecCCCCCcCcCCHHHHHHHHHhhhhc
Confidence 99999999999999999999999999999999999999999999999999999888899999999999999999988899
Q ss_pred hhHHHHHHhhhhcccccccCC-C-------CCCCcccccCCCCccccchhccccCCccccCCCCCccccccccccccccc
Q 007903 323 SEIAANYVKAVAEEDITCFGH-S-------DSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERL 394 (585)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~ 394 (585)
|++||++.||+++.+.++.-. + +.+|. +..........|.+|+++.+|.| ...+||||+||+|++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 313 (515)
T PLN02825 241 SEIAANYVKAVGGEDYSYSLGLDSVNTTPFNNNGR------GFWGSGSATDSFQNGVGFDNGNG-LSGEQGFAIGGEERL 313 (515)
T ss_pred chhhhhhhhhccccccccccccccccccccccccc------cccccccccccccccccccCccc-ccccccccccchhhc
Confidence 999999999999986543110 0 01111 00111223335677777777666 478899999999999
Q ss_pred ccccCcHHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeeccccccccccccccCHHHHHHHHHHHHHccc
Q 007903 395 SRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGA 474 (585)
Q Consensus 395 ~~~~~m~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~~d~~~~IR~at~~D~~~I~~Li~~~~~~~~ 474 (585)
+++.++++||.+|.+||++||+|+||+|++.+|+||+||||+||+||+|++|.|+.||+++++|++.|.+|+++++..+.
T Consensus 314 ~~~~~~~~~l~~a~~a~~~gv~r~hl~~~~~~gall~elft~dg~gt~i~~~~~e~IR~At~eDi~~I~~Li~~lee~g~ 393 (515)
T PLN02825 314 SRLNGYLSELAAAAFVCRGGVQRVHLLDGTIEGVLLLELFTRDGMGTMIASDMYEGTRMARVEDLAGIRQIIRPLEESGI 393 (515)
T ss_pred hhhhhHHHHHHHHHHHHHcCCCeEEeccCCCCchHHHHhhccCCceeEeccChHhhheeCCHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988888
Q ss_pred cccCCHHHHHhccCeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCccc
Q 007903 475 LVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTN 554 (585)
Q Consensus 475 ~~~~~~e~l~~~i~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~ 554 (585)
...++.+.++..+..|+|++.||++|||+.++++..++.++|.+|+|+|+|||+|+|++||++++ ++|+++|+...
T Consensus 394 lv~rs~e~le~ei~~f~V~e~Dg~IVG~aal~~~~~~~~aEI~~laV~P~yRGkGiG~~LL~~le----~~Ar~~G~~~L 469 (515)
T PLN02825 394 LVRRTDEELLRALDSFVVVEREGSIIACAALFPFFEEKCGEVAAIAVSPECRGQGQGDKLLDYIE----KKAASLGLEKL 469 (515)
T ss_pred CcCCCHHHHHhcCCcEEEEEECCEEEEEEEEEeecCCCcEEEEEEEECHHHcCCCHHHHHHHHHH----HHHHHCCCCEE
Confidence 77888999998888899999999999999998776667899999999999999999999999999 99999999875
Q ss_pred CccceecccccccccCeeecCc
Q 007903 555 GFPFLRGRTHSYYRLKFNCSSK 576 (585)
Q Consensus 555 g~~~~~~~a~~YYrlGF~~~~~ 576 (585)
-+.. ....++|+++||...+.
T Consensus 470 ~Llt-t~a~~fY~k~GF~~~~~ 490 (515)
T PLN02825 470 FLLT-TRTADWFVRRGFSECSI 490 (515)
T ss_pred EEEe-CcHHHHHHHCCCEEeCh
Confidence 3222 23445666899997654
|
|
| >TIGR01890 N-Ac-Glu-synth amino-acid N-acetyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-72 Score=612.18 Aligned_cols=404 Identities=41% Similarity=0.672 Sum_probs=361.7
Q ss_pred HHHHHHHhhhHHHhhcCCeEEEEeCCccCCCCChHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCccC
Q 007903 83 FVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRI 162 (585)
Q Consensus 83 ~~~~~r~a~~yi~~~r~k~iVIKlGGs~l~~~~l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rv 162 (585)
|+++||||+|||++||++++|||+||+++.++++..+++||+.|+..|.++||||||||+++++++++|++++|++|+|+
T Consensus 1 ~~~~~~~~~~~i~~~~~~~~ViK~GG~~~~~~~~~~~~~~i~~l~~~g~~~vlVHGgg~~i~~~~~~~g~~~~~~~G~Rv 80 (429)
T TIGR01890 1 FVAWFREAAPYINAHRGKTFVVGLGGELVEGGNLGNIVADIALLHSLGVRLVLVHGARPQIERILAARGRTPHYHRGLRV 80 (429)
T ss_pred ChhHHhhhhHHHHHhCCCEEEEEEChhhccCccHHHHHHHHHHHHHCCCcEEEEcCCCHHHHHHHHHcCCCceeeCCccc
Confidence 79999999999999999999999999999987889999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHH
Q 007903 163 TDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVT 242 (585)
Q Consensus 163 t~~~~l~~~~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~ 242 (585)
|++++|+++.+++|++|..|++.|+ +++-..+.+.+++++.||+++.++++++.+++|+|++|+|+.+|++
T Consensus 81 T~~~~l~~~~~~~g~vn~~l~~~l~---------~~~~~~~~~~~~l~~~dg~~~~a~~~~~~~~~~~g~~G~v~~v~~~ 151 (429)
T TIGR01890 81 TDEASLEQAQQAAGTLRLAIEARLS---------MSLSNTPMAGSRLPVVSGNFVTARPIGVIEGVDYEHTGVIRKIDTE 151 (429)
T ss_pred CCHHHHHHHHHHhChHHHHHHHHHH---------hcCCcccccccCceEccceEEEEEECCCCcCccccccceEEEEcHH
Confidence 9999999986679999999999864 3321222334679999999999999887788999999999999999
Q ss_pred HHHHHHcCCCeEEEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC-CCCcccccccHHHHHHHHHhhch
Q 007903 243 RMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-ESGHLIRFLTLQEADSLIRQRVK 321 (585)
Q Consensus 243 ~I~~lL~~G~IPVi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~-~~~~lI~~it~~e~~~li~~~~~ 321 (585)
.|+.+|+.|+|||++|++++.+|+++|+|+|++|++||.+|+|++|||+|||||+. .++++|++|+.+|+++++...
T Consensus 152 ~l~~ll~~g~ipvi~pi~~~~~g~~~nvnaD~~A~~lA~al~a~kli~ltdv~Gv~~~~g~~i~~i~~~~~~~l~~~~-- 229 (429)
T TIGR01890 152 GIRRQLDAGSIVLLSPLGHSPTGETFNLDMEDVATSVAISLKADKLIYFTLSPGISDPDGTLAAELSPQEVESLAERL-- 229 (429)
T ss_pred HHHHHHHCCCeEEECCcccCCCCCEEEeCHHHHHHHHHHHcCCCEEEEEeCCCcccCCCCCCcccCCHHHHHHHHHhc--
Confidence 99999999999999999999999999999999999999999999999999999984 569999999999999987541
Q ss_pred hhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccCcH
Q 007903 322 QSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYL 401 (585)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~ 401 (585)
.| || |.
T Consensus 230 -----------------------------------------------------~~-~~--------------------~~ 235 (429)
T TIGR01890 230 -----------------------------------------------------GS-ET--------------------TR 235 (429)
T ss_pred -----------------------------------------------------cC-CC--------------------cH
Confidence 13 43 69
Q ss_pred HHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeeccccccccccccccCHHHHHHHHHHHHHccccccCCHH
Q 007903 402 SELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDE 481 (585)
Q Consensus 402 ~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~~d~~~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e 481 (585)
+||++|..|++.||+++||+||+.+++|+.|||+++|.||+|..|.|+.||+++++|++++.++++++....+..+++.+
T Consensus 236 ~kl~~a~~a~~~gv~~v~i~~g~~~~~l~~el~~~~g~GT~i~~d~y~~IR~at~~Dl~~I~~L~~~~~~~~~~~~~~~~ 315 (429)
T TIGR01890 236 RLLSAAVKACRGGVHRSHIVSYAEDGSLLQELFTRDGIGTSISKEAFESIRQATIDDIGGIAALIRPLEEQGILVRRSRE 315 (429)
T ss_pred HHHHHHHHHHHcCCCeEEEECCCCCcHHHHHHhcCCCCcceEeccchhheEECCHHHHHHHHHHHHHHHHcCCchhhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999887777776677788
Q ss_pred HHHhccCeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceec
Q 007903 482 ELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRG 561 (585)
Q Consensus 482 ~l~~~i~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~ 561 (585)
.+......+++++.+++++||+.+.++.+...++|..++|+|+|||+|+|++||++++ ++|+++|+..... ....
T Consensus 316 ~l~~~~~~~~V~~~dg~iVG~~~~~~~~~~~~~~I~~l~V~p~~Rg~GiG~~Ll~~l~----~~A~~~G~~~l~v-~~~~ 390 (429)
T TIGR01890 316 YLEREISEFSIIEHDGNIIGCAALYPYAEEDCGEMACLAVSPEYQDGGRGERLLAHIE----DRARQMGISRLFV-LTTR 390 (429)
T ss_pred HHHhhcCcEEEEEECCEEEEEEEEEecCCCCeEEEEEEEECHHHcCCCHHHHHHHHHH----HHHHHcCCCEEEE-eecc
Confidence 8887777788999999999999998655556799999999999999999999999999 9999999886421 1122
Q ss_pred ccccccccCeeecCc
Q 007903 562 RTHSYYRLKFNCSSK 576 (585)
Q Consensus 562 ~a~~YYrlGF~~~~~ 576 (585)
..++|+++||+..+.
T Consensus 391 a~~fY~k~GF~~~g~ 405 (429)
T TIGR01890 391 TGHWFRERGFQTASV 405 (429)
T ss_pred hHHHHHHCCCEECCh
Confidence 344566899998765
|
This model represents a clade of amino-acid N-acetyltransferases acting mainly on glutamate in the first step of the "acetylated" ornithine biosynthesis pathway. For this reason it is also called N-acetylglutamate synthase. The enzyme may also act on aspartate. |
| >PRK05279 N-acetylglutamate synthase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-68 Score=583.14 Aligned_cols=410 Identities=43% Similarity=0.681 Sum_probs=361.1
Q ss_pred hhHHHHHHHHhhhHHHhhcCCeEEEEeCCccCCCCChHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCC
Q 007903 80 DEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGR 159 (585)
Q Consensus 80 ~~~~~~~~r~a~~yi~~~r~k~iVIKlGGs~l~~~~l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g 159 (585)
...|+++||+++|||++||++++|||+||++|.+++++.++++|+.|+..|+++||||||||++++.++++|++++|++|
T Consensus 6 ~~~~~~~~~~~~~~i~~~~~~~~VIk~GG~~l~~~~~~~~~~~i~~l~~~g~~~VlVHGgg~~i~~~~~~~g~~~~~~~G 85 (441)
T PRK05279 6 STEFVDWFRHSAPYINAHRGKTFVIMLGGEAIAHGNFSNIVHDIALLHSLGIRLVLVHGARPQIEEQLAARGIEPRYHKG 85 (441)
T ss_pred hhHHHHHHHHHhHHHHHhCCCEEEEEECchhccChhHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHcCCCceecCC
Confidence 45699999999999999999999999999999988889999999999999999999999999999999999999999999
Q ss_pred ccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchhHHhcCCCC-cceeEEeeecCcceeeeeeccccccccCcceeeEEE
Q 007903 160 YRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSS-RWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKK 238 (585)
Q Consensus 160 ~rvt~~~~l~~~~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~-~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~ 238 (585)
+|+|++++|+++.++.|++|..|++.|+. |++. +++...+++.|++++.++|+++.++.|||++|+++.
T Consensus 86 ~RvT~~~~l~~~~~~~g~v~~~l~~~l~~----------g~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~v~~ 155 (441)
T PRK05279 86 LRVTDAAALECVKQAAGELRLDIEARLSM----------GLPNTPMAGAHIRVVSGNFVTARPLGVDDGVDYQHTGEVRR 155 (441)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHhc----------cCCCCcccCCcceEeeccEEEEEECCCCCCccccceeeEEE
Confidence 99999999999855579999999987642 4441 122445788899999999998778889999999999
Q ss_pred ecHHHHHHHHcCCCeEEEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeeccccc-CCCCcccccccHHHHHHHHH
Q 007903 239 VDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPIL-DESGHLIRFLTLQEADSLIR 317 (585)
Q Consensus 239 v~~~~I~~lL~~G~IPVi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl-~~~~~lI~~it~~e~~~li~ 317 (585)
+|.+.|+.||++|+|||++|++++++|+.+|+|+|++|++||.+|+||+|||+|||||+ ++++++|++++.+|+++++.
T Consensus 156 v~~~~i~~ll~~g~ipV~~~i~~~~~g~~~ni~~D~~a~~lA~~l~a~~lv~ltdv~GV~~~~~~~i~~i~~~~~~~~~~ 235 (441)
T PRK05279 156 IDAEAIRRQLDSGAIVLLSPLGYSPTGESFNLTMEEVATQVAIALKADKLIFFTESQGVLDEDGELIRELSPNEAQALLE 235 (441)
T ss_pred EeHHHHHHHHHCCCeEEECCceECCCCCEEEECHHHHHHHHHHHcCCCEEEEEECCCCccCCCCchhhhCCHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999998 46799999999999988875
Q ss_pred hhchhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccc
Q 007903 318 QRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRL 397 (585)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~ 397 (585)
.-. .|+++ | |
T Consensus 236 ~~~--------------------------~~~~~------------------------g-g------------------- 245 (441)
T PRK05279 236 ALE--------------------------DGDYN------------------------S-G------------------- 245 (441)
T ss_pred hhh--------------------------cCCCC------------------------c-c-------------------
Confidence 210 01122 4 5
Q ss_pred cCcHHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeeccccccccccccccCHHHHHHHHHHHHHcccccc
Q 007903 398 NGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVR 477 (585)
Q Consensus 398 ~~m~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~~d~~~~IR~at~~D~~~I~~Li~~~~~~~~~~~ 477 (585)
|.+||++|..|++.|+++|||+|++.+++|+.|+|+.+|.||+|.++.|+.||+++++|++++.+++.+.....+..+
T Consensus 246 --M~~Kv~~a~~~~~~gv~~v~i~~~~~~~~l~~~l~~~~g~GT~i~~~~y~~IR~at~~D~~~I~~L~~~~~~~~~~~~ 323 (441)
T PRK05279 246 --TARFLRAAVKACRGGVRRSHLISYAEDGALLQELFTRDGIGTMIVMESLEQLRRATIDDVGGILELIRPLEEQGILVR 323 (441)
T ss_pred --HHHHHHHHHHHHHcCCCEEEEecCCCCcHHHHHHhcCCCCceEEecCchHHeEeCCHHHHHHHHHHHHHHHHcCCccc
Confidence 899999999999999999999999999999999999999999999999999999999999999999887776666667
Q ss_pred CCHHHHHhccCeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcc
Q 007903 478 RTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFP 557 (585)
Q Consensus 478 ~~~e~l~~~i~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~ 557 (585)
|+.+.+...+..+++++++++++||+.+.++.....++|..++|+|+|||+|+|++||++++ ++|++.|+......
T Consensus 324 ~~~~~l~~~~~~~~va~~dg~iVG~~~~~~~~~~~~~~I~~l~V~p~~Rg~GiG~~Ll~~l~----~~a~~~g~~~l~l~ 399 (441)
T PRK05279 324 RSREQLEREIDKFTVIERDGLIIGCAALYPFPEEKMGEMACLAVHPDYRGSGRGERLLKRIE----QRARQLGLKRLFVL 399 (441)
T ss_pred cCHHHHhcccCcEEEEEECCEEEEEEEEEEcCCCCeEEEEEEEECHHHcCCCHHHHHHHHHH----HHHHHcCCCEEEEe
Confidence 78887877777789999999999999887554456789999999999999999999999999 99999998764221
Q ss_pred ceecccccccccCeeecCc
Q 007903 558 FLRGRTHSYYRLKFNCSSK 576 (585)
Q Consensus 558 ~~~~~a~~YYrlGF~~~~~ 576 (585)
.....++|+++||+..+.
T Consensus 400 -~~~a~~fY~k~GF~~~g~ 417 (441)
T PRK05279 400 -TTRTAHWFLERGFVPVDV 417 (441)
T ss_pred -cchHHHHHHHCcCEECCh
Confidence 122334566899998765
|
|
| >COG0548 ArgB Acetylglutamate kinase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-56 Score=445.65 Aligned_cols=260 Identities=38% Similarity=0.616 Sum_probs=243.4
Q ss_pred cCCeEEEEeCCccCCCCC-hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHH-HHHH
Q 007903 98 RGGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAA 175 (585)
Q Consensus 98 r~k~iVIKlGGs~l~~~~-l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~-~~~~ 175 (585)
|+|++|||+||+++.+++ ++.+++||++|+..|.++|||||||||+++.|+++|++++|++|+|+||+++|+++ |++.
T Consensus 1 ~~k~~VIK~GG~~~~~~~l~~~~~~di~lL~~~G~~~VvVHGggp~I~~~l~~~gie~~f~~glRvTd~~tlevv~mvl~ 80 (265)
T COG0548 1 RGKTIVIKLGGSAMEDENLLEAFASDIALLKSVGIRPVVVHGGGPQIDEMLAKLGIEPEFVKGLRVTDAETLEVVEMVLG 80 (265)
T ss_pred CCceEEEEECceeecCchHHHHHHHHHHHHHHCCCcEEEEeCCchHHHHHHHHcCCCCeeeCCEEcCCHHHHHHHHHHHH
Confidence 579999999999999988 89999999999999999999999999999999999999999999999999999998 7888
Q ss_pred hHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHHcCCCeEE
Q 007903 176 GGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVI 255 (585)
Q Consensus 176 G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL~~G~IPV 255 (585)
|++|+.|++.| +++|.+ ++++++.||+++.|++++..+++||||+|+|+++|++.|+.+|++|+|||
T Consensus 81 G~vNk~iva~l---------~~~g~~----avGlsg~Dg~li~A~~~~~~~~id~g~vG~i~~Vn~~~i~~ll~~~~IpV 147 (265)
T COG0548 81 GTVNKEIVARL---------SKHGGQ----AVGLSGVDGNLVTAKKLDVDDGVDLGYVGEIRKVNPELIERLLDNGAIPV 147 (265)
T ss_pred HHHHHHHHHHH---------HHhCCc----ceeeeecCCCEEEEEEcccccccccceeeeEEEECHHHHHHHHhCCCceE
Confidence 89999999965 778875 89999999999999999888889999999999999999999999999999
Q ss_pred EcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC-CCCc--ccccccHHHHHHHHHhhchhhhHHHHHHhh
Q 007903 256 LSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-ESGH--LIRFLTLQEADSLIRQRVKQSEIAANYVKA 332 (585)
Q Consensus 256 i~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~-~~~~--lI~~it~~e~~~li~~~~~~~~~~~~~~~~ 332 (585)
++|++++++|+.+|+|+|++|+++|.+|+|+|||+|||++|+. ..+. +|++++.+|+++++.++.
T Consensus 148 iapia~~~~G~~~NvnaD~~A~~iA~aLkAekLi~ltdv~Gvl~~~~~~s~i~~~~~~~~~~li~~~~------------ 215 (265)
T COG0548 148 IAPIAVDEDGETLNVNADTAAGALAAALKAEKLILLTDVPGVLDDKGDPSLISELDAEEAEELIEQGI------------ 215 (265)
T ss_pred EecceECCCCcEEeeCHHHHHHHHHHHcCCCeEEEEeCCcccccCCCCceeeccCCHHHHHHHHhcCC------------
Confidence 9999999999999999999999999999999999999999984 3343 999999999999987632
Q ss_pred hhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccCcHHHHHHHHHHHH
Q 007903 333 VAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCR 412 (585)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~~kl~aa~~a~~ 412 (585)
++ | | |.+||++|+.||+
T Consensus 216 -----------------i~------------------------~-G---------------------Mi~Kv~~a~~A~~ 232 (265)
T COG0548 216 -----------------IT------------------------G-G---------------------MIPKVEAALEALE 232 (265)
T ss_pred -----------------cc------------------------C-c---------------------cHHHHHHHHHHHH
Confidence 22 4 5 8999999999999
Q ss_pred cCCCeEEEecCccchhhHHHHHhcCCCceeecc
Q 007903 413 RGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (585)
Q Consensus 413 ~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~~ 445 (585)
.||++|||+||+.+++||+|||+++++||++.+
T Consensus 233 ~Gv~~v~ii~g~~~~~ll~eLFt~~giGT~i~~ 265 (265)
T COG0548 233 SGVRRVHIISGRVPHSLLLELFTRDGIGTMIVR 265 (265)
T ss_pred hCCCeEEEecCCCcchHHHHHhcCCCcceEecC
Confidence 999999999999999999999999999999863
|
|
| >cd04237 AAK_NAGS-ABP AAK_NAGS-ABP: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the arginine-biosynthesis pathway (ABP) found in gamma- and beta-proteobacteria and higher plant chloroplasts | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-54 Score=442.89 Aligned_cols=278 Identities=51% Similarity=0.796 Sum_probs=254.2
Q ss_pred HHHHHHHHhhhHHHhhcCCeEEEEeCCccCCCCChHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCcc
Q 007903 82 QFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYR 161 (585)
Q Consensus 82 ~~~~~~r~a~~yi~~~r~k~iVIKlGGs~l~~~~l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~r 161 (585)
+|++|||+++|||++||++++|||+||+++.+++++.++++|+.|++.|+++|||||||||++++++++|+++++++|+|
T Consensus 1 ~~~~~~~~~~~yi~~~~~~~~VIKlGG~ai~~~~l~~~~~~ia~l~~~g~~~ViVHGggp~i~~~~~~~gi~~~~~~G~R 80 (280)
T cd04237 1 QFVDWFREAAPYINAHRGKTFVIAFGGEAVAHPNFDNIVHDIALLHSLGIRLVLVHGARPQIDQRLAERGLEPRYHRGLR 80 (280)
T ss_pred ChHHHHHHHhHHHHHhCCCEEEEEEChHHhcCchHHHHHHHHHHHHHCCCcEEEEeCCCHHHHHHHHHcCCCccccCCcC
Confidence 69999999999999999999999999999998788999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchhHHhcCCCC-cceeEEeeecCcceeeeeeccccccccCcceeeEEEec
Q 007903 162 ITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSS-RWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVD 240 (585)
Q Consensus 162 vt~~~~l~~~~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~-~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~ 240 (585)
+|++++|+++.+++|++|+.|++.|+. |++. +++..++++.|++++.++++++.++.|||++|+++.+|
T Consensus 81 vT~~~~l~~~~~~~g~v~~~l~~~l~~----------~~~a~~~~~~~~~~~~~~~v~~~~~~~~~~~~~g~~G~v~~v~ 150 (280)
T cd04237 81 ITDAAALECVKEAAGAVRLEIEALLSM----------GLPNSPMAGARIRVVSGNFVTARPLGVVDGVDFGHTGEVRRID 150 (280)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHh----------hccccCcCCCceEEecCeEEEEEECCcccCceEeeeccEEEEc
Confidence 999999999865679999999987632 4431 22234678889999999999888889999999999999
Q ss_pred HHHHHHHHcCCCeEEEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC-CCCcccccccHHHHHHHHHhh
Q 007903 241 VTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-ESGHLIRFLTLQEADSLIRQR 319 (585)
Q Consensus 241 ~~~I~~lL~~G~IPVi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~-~~~~lI~~it~~e~~~li~~~ 319 (585)
.+.|++||++|+|||++|++++.+|+.+|+|+|++|++||.+|+||+|+|+||+||+. .++++|++++.+|+++++..+
T Consensus 151 ~~~i~~lL~~g~ipv~~~~g~~~~g~~lnvnaD~~A~~LA~~L~a~klv~ltdv~GV~~~~~~~i~~i~~~e~~~l~~~~ 230 (280)
T cd04237 151 ADAIRRQLDQGSIVLLSPLGYSPTGEVFNLSMEDVATAVAIALKADKLIFLTDGPGLLDDDGELIRELTAQEAEALLETG 230 (280)
T ss_pred HHHHHHHHHCCCEEEECCceECCCCCEEeeCHHHHHHHHHHHcCCCEEEEEeCCCcccCCCCCccccCCHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999999999999985 479999999999999998653
Q ss_pred chhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccC
Q 007903 320 VKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNG 399 (585)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~ 399 (585)
. + -+| |
T Consensus 231 ~-----------------------------~-----------------------~~g-g--------------------- 236 (280)
T cd04237 231 A-----------------------------L-----------------------LTN-D--------------------- 236 (280)
T ss_pred C-----------------------------C-----------------------CCC-C---------------------
Confidence 2 1 024 5
Q ss_pred cHHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceee
Q 007903 400 YLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 443 (585)
Q Consensus 400 m~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i 443 (585)
|.+||++|.+|+++|++++||+|++.+++|+.|+|+++|.||+|
T Consensus 237 M~~Kv~~a~~a~~~Gv~~v~I~~~~~~~~ll~elft~~g~GT~i 280 (280)
T cd04237 237 TARLLQAAIEACRGGVPRVHLISYAEDGALLLELFTRDGVGTLI 280 (280)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHhcCCCCCCcC
Confidence 99999999999999999999999999999999999999999985
|
Domain architecture of these NAGS consisted of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal NAG synthase, acetyltransferase (ArgA) domain. Both bacterial and plant sequences in this CD have a conserved N-terminal extension; a similar sequence in the NAG kinases of the cyclic arginine-biosynthesis pathway has been implicated in feedback inhibition sensing. Plant sequences also have an N-terminal chloroplast transit peptide and an insert (approx. 70 residues) in the C-terminal region of ArgB. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK). |
| >CHL00202 argB acetylglutamate kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-53 Score=435.86 Aligned_cols=274 Identities=27% Similarity=0.460 Sum_probs=252.1
Q ss_pred hhHHHHHHHHhhhHHHhhcCCeEEEEeCCccCCCCC-hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccC
Q 007903 80 DEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLG 158 (585)
Q Consensus 80 ~~~~~~~~r~a~~yi~~~r~k~iVIKlGGs~l~~~~-l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~ 158 (585)
.++++++||+++|||++||++++|||+||+++.+++ .+.+++||+.|+..|.++||||||||++++.++++|++++|++
T Consensus 4 ~~~~~~~~~~~~pyi~~~~~~~~VIk~gG~~~~~~~l~~~~~~di~~l~~~g~~~VlVHGgg~~i~~~~~~~g~~~~~~~ 83 (284)
T CHL00202 4 NDERVQVLSEALPYIQKFRGRIMVIKYGGAAMKNLILKADIIKDILFLSCIGLKIVVVHGGGPEINFWLKQLNISPKFWN 83 (284)
T ss_pred hHHHHHHHHHHHHHHHHHcCCeEEEEEChHHhcCcchHHHHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHCCCCCEeEC
Confidence 347899999999999999999999999999998876 5699999999999999999999999999999999999999999
Q ss_pred CccCCCHHHHHHH-HHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEE
Q 007903 159 RYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVK 237 (585)
Q Consensus 159 g~rvt~~~~l~~~-~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~ 237 (585)
|+|+|++++|+++ ++++|++|.+|++.| .++|++ ++++++.|++++++++. ++.|++++|+++
T Consensus 84 G~rvT~~~~l~~~~~~l~g~ln~~lv~~L---------~~~Gv~----av~l~~~d~~~i~a~~~---~~~d~~~~G~i~ 147 (284)
T CHL00202 84 GIRVTDKVTMEIVEMVLAGKVNKDLVGSI---------NANGGK----AVGLCGKDANLIVARAS---DKKDLGLVGEIQ 147 (284)
T ss_pred CcccCCHHHHHHHHHHHhhHHHHHHHHHH---------HhCCCC----eeeeeeccCCEEEEEeC---CCcccccceeEE
Confidence 9999999999998 678899999999965 678887 89999999999999874 557899999999
Q ss_pred EecHHHHHHHHcCCCeEEEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccCC----CCcccccccHHHHH
Q 007903 238 KVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDE----SGHLIRFLTLQEAD 313 (585)
Q Consensus 238 ~v~~~~I~~lL~~G~IPVi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~~----~~~lI~~it~~e~~ 313 (585)
.+|.+.|+.+|+.|+|||++|++++.+|+.+|+|+|++|++||.+|+||+|+|+||+||+.. .+++|++++.+|++
T Consensus 148 ~v~~~~i~~ll~~g~iPVi~~~~~~~~g~~~ni~~D~~A~~lA~~l~Ad~li~lTdv~Gv~~~~~d~~~~i~~i~~~e~~ 227 (284)
T CHL00202 148 QVDPQLIDMLLEKNYIPVIASVAADHDGQTYNINADVVAGEIAAKLNAEKLILLTDTPGILADINDPNSLISTLNIKEAR 227 (284)
T ss_pred ecCHHHHHHHHHCCCEEEECCCccCCCCcEEecCHHHHHHHHHHHhCCCEEEEEeCChhhcCCCCCCCCccccccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999842 37899999999988
Q ss_pred HHHHhhchhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccc
Q 007903 314 SLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQER 393 (585)
Q Consensus 314 ~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~ 393 (585)
+++..+. + +| |
T Consensus 228 ~l~~~g~-----------------------------~------------------------tG-G--------------- 238 (284)
T CHL00202 228 NLASTGI-----------------------------I------------------------SG-G--------------- 238 (284)
T ss_pred HHHhcCC-----------------------------C------------------------CC-C---------------
Confidence 8864311 2 35 5
Q ss_pred cccccCcHHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeec
Q 007903 394 LSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (585)
Q Consensus 394 ~~~~~~m~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~ 444 (585)
|.+||++|..|++.|++++||+||+.+++||.|+|++++.||+|.
T Consensus 239 ------M~~Kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~g~GT~i~ 283 (284)
T CHL00202 239 ------MIPKVNCCIRALAQGVEAAHIIDGKEKHALLLEILTEKGIGSMLV 283 (284)
T ss_pred ------HHHHHHHHHHHHHcCCCEEEEeCCCCCChHHHHHhcCCCCceEEe
Confidence 899999999999999999999999999999999999999999985
|
|
| >PLN02512 acetylglutamate kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-50 Score=419.91 Aligned_cols=275 Identities=29% Similarity=0.487 Sum_probs=252.3
Q ss_pred hhHHHHHHHHhhhHHHhhcCCeEEEEeCCccCCCCC-hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccC
Q 007903 80 DEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLG 158 (585)
Q Consensus 80 ~~~~~~~~r~a~~yi~~~r~k~iVIKlGGs~l~~~~-l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~ 158 (585)
...|++|||+++|||++||++++||||||+++++++ ...++++|+.|+..|.++|||||||++++++++++|+++++.+
T Consensus 28 ~~~~~~~~r~~~pyi~~~~~~tiVIKlGGs~i~d~~~~~~~~~di~~l~~~g~~iVlVHGgG~~i~~~~~~~gi~~~~~~ 107 (309)
T PLN02512 28 NLSRVDILSEALPFIQRFRGKTVVVKYGGAAMKDPELKAGVIRDLVLLSCVGLRPVLVHGGGPEINSWLKKVGIEPQFKN 107 (309)
T ss_pred hHHHHHHHHHHhHHHHHHCCCeEEEEECCeeccChhHHHHHHHHHHHHHHCCCCEEEEECCcHHHHHHHHHcCCCCcCCC
Confidence 348999999999999999999999999999999877 4679999999999999999999999999999999999999999
Q ss_pred CccCCCHHHHHHH-HHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEE
Q 007903 159 RYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVK 237 (585)
Q Consensus 159 g~rvt~~~~l~~~-~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~ 237 (585)
|+|+|++++++++ ++++|++|.+|++. |+++|++ ++++++.|++++++++++ ++.|++++|+++
T Consensus 108 G~rvT~~~~lei~~~~l~g~ln~~lv~~---------L~~~Gv~----av~l~g~d~~~i~a~~~~--~~~~~~~~G~i~ 172 (309)
T PLN02512 108 GLRVTDAETMEVVEMVLVGKVNKSLVSL---------INKAGGT----AVGLSGKDGRLLRARPSP--NSADLGFVGEVT 172 (309)
T ss_pred CCcCCCHHHHHHHHHHHhhHHHHHHHHH---------HHHcCCC----eEEeehhhCCEEEEEEcC--cCccccccceee
Confidence 9999999999998 67789999999986 4789987 899999999999998862 446899999999
Q ss_pred EecHHHHHHHHcCCCeEEEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC----CCCcccccccHHHHH
Q 007903 238 KVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD----ESGHLIRFLTLQEAD 313 (585)
Q Consensus 238 ~v~~~~I~~lL~~G~IPVi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~----~~~~lI~~it~~e~~ 313 (585)
.++.+.|+.+|+.|+|||++|++++++|+.+|+|+|++|++||.+|+||+|+|+|||||++ +++++|++++.+|++
T Consensus 173 ~v~~~~i~~lL~~g~IPVi~~~~~d~~g~~~~i~~D~~A~~lA~~L~Ad~li~lTdV~GV~~~~~~~~~lI~~i~~~e~~ 252 (309)
T PLN02512 173 RVDPTVLRPLVDDGHIPVIATVAADEDGQAYNINADTAAGEIAAALGAEKLILLTDVAGVLEDKDDPGSLVKELDIKGVR 252 (309)
T ss_pred ecCHHHHHHHHhCCCEEEEeCceECCCCCEeccCHHHHHHHHHHHcCCCEEEEEeCCcceeCCCCCCcCCCcccCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999984 358999999999988
Q ss_pred HHHHhhchhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccc
Q 007903 314 SLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQER 393 (585)
Q Consensus 314 ~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~ 393 (585)
+++..+. + +| |
T Consensus 253 ~l~~~~~-----------------------------v------------------------tG-G--------------- 263 (309)
T PLN02512 253 KLIADGK-----------------------------I------------------------AG-G--------------- 263 (309)
T ss_pred HHHhCCC-----------------------------C------------------------CC-c---------------
Confidence 8864311 2 35 5
Q ss_pred cccccCcHHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeec
Q 007903 394 LSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (585)
Q Consensus 394 ~~~~~~m~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~ 444 (585)
|.+||++|..+++.|++++||+||..++.|+.++|++++.||+|.
T Consensus 264 ------M~~Kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~~l~~~~~~GT~I~ 308 (309)
T PLN02512 264 ------MIPKVECCVRSLAQGVKTAHIIDGRVPHSLLLEILTDEGAGTMIT 308 (309)
T ss_pred ------HHHHHHHHHHHHHcCCCEEEEecCCCCChHHHHHhcCCCCeeEEe
Confidence 899999999999999999999999999999999999999999985
|
|
| >PRK00942 acetylglutamate kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-49 Score=404.76 Aligned_cols=276 Identities=34% Similarity=0.549 Sum_probs=253.0
Q ss_pred hHHHHHHHHhhhHHHhhcCCeEEEEeCCccCCCCC-hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCC
Q 007903 81 EQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGR 159 (585)
Q Consensus 81 ~~~~~~~r~a~~yi~~~r~k~iVIKlGGs~l~~~~-l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g 159 (585)
..+++|||+++|||++||++++|||+||+++++++ ++.++++|+.|++.|.++|||||+|++++++++++++++++.+|
T Consensus 5 ~~~~~~~r~~~~yi~~~~~~~iViK~GGs~l~~~~~~~~l~~~i~~l~~~g~~vVlVhGgg~~~~~~~~~~g~~~~~~~g 84 (283)
T PRK00942 5 LEKAEVLSEALPYIQRFMGKTIVIKYGGNAMTDEELKEAFARDIVLLKQVGINPVVVHGGGPQIDELLKKLGIESEFVNG 84 (283)
T ss_pred HHHHHHHHHHHHHHHHHcCCeEEEEEChHHhcCcchHHHHHHHHHHHHHCCCCEEEEeCChHHHHHHHHHCCCCcEeeCC
Confidence 47999999999999999999999999999999877 68899999999999999999999999999999999999999999
Q ss_pred ccCCCHHHHHHH-HHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEE
Q 007903 160 YRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKK 238 (585)
Q Consensus 160 ~rvt~~~~l~~~-~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~ 238 (585)
+|+|++++|+.+ ++++|++|..+++. |+++|++ ++++++.|++++++++. .+++||+++|+++.
T Consensus 85 ~~~t~~~~l~~~~~a~~G~l~~~i~~~---------L~~~Gv~----a~~l~~~~~~~~ta~~~--~~~~~~~~~g~i~~ 149 (283)
T PRK00942 85 LRVTDAETMEVVEMVLAGKVNKELVSL---------INKHGGK----AVGLSGKDGGLITAKKL--EEDEDLGFVGEVTP 149 (283)
T ss_pred EecCCHHHHHHHHHHHcCchHHHHHHH---------HHhCCCC----ccceeeccCCEEEEEEC--CCCCCCccccceEE
Confidence 999999999987 45559999999875 4788987 78999999999999876 67789999999999
Q ss_pred ecHHHHHHHHcCCCeEEEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC-CCCcccccccHHHHHHHHH
Q 007903 239 VDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-ESGHLIRFLTLQEADSLIR 317 (585)
Q Consensus 239 v~~~~I~~lL~~G~IPVi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~-~~~~lI~~it~~e~~~li~ 317 (585)
+|.+.|+++|++|.|||++|++++++|+++|+|+|.+|++||.+|+||+|+|+|||||+. .++++|++++.+|+++++.
T Consensus 150 i~~~~l~~ll~~g~vpVv~~~~~~~~g~~~~l~~D~~A~~lA~~l~A~~li~~tdv~Gv~~~~~~~i~~i~~~e~~~~~~ 229 (283)
T PRK00942 150 VNPALLEALLEAGYIPVISPIGVGEDGETYNINADTAAGAIAAALGAEKLILLTDVPGVLDDKGQLISELTASEAEELIE 229 (283)
T ss_pred ECHHHHHHHHHCCCEEEEcCcEECCCCcEEEECHHHHHHHHHHHcCCCEEEEEECCcccccCCCcccccCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999985 4699999999999888864
Q ss_pred hhchhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccc
Q 007903 318 QRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRL 397 (585)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~ 397 (585)
.+. + +| |
T Consensus 230 ~~~-----------------------------~------------------------tg-g------------------- 236 (283)
T PRK00942 230 DGV-----------------------------I------------------------TG-G------------------- 236 (283)
T ss_pred cCC-----------------------------C------------------------CC-c-------------------
Confidence 311 1 24 5
Q ss_pred cCcHHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeeccc
Q 007903 398 NGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446 (585)
Q Consensus 398 ~~m~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~~d 446 (585)
|.+||++|..+++.|+.+++|+||..++.||.++|++++.||+|.++
T Consensus 237 --m~~Kl~~a~~~~~~gv~~v~I~~g~~~~~ll~~~~~~~~~GT~i~~~ 283 (283)
T PRK00942 237 --MIPKVEAALDAARGGVRSVHIIDGRVPHALLLELFTDEGIGTMIVPD 283 (283)
T ss_pred --hHHHHHHHHHHHHhCCCEEEEeCCCCCchHHHHHhcCCCcceEEecC
Confidence 89999999999999999999999999999999999999999999764
|
|
| >cd04250 AAK_NAGK-C AAK_NAGK-C: N-Acetyl-L-glutamate kinase - cyclic (NAGK-C) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in some bacteria and photosynthetic organisms using the non-acetylated, cyclic route of ornithine biosynthesis | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-47 Score=392.96 Aligned_cols=269 Identities=32% Similarity=0.535 Sum_probs=246.4
Q ss_pred HHHhhhHHHhhcCCeEEEEeCCccCCCCC-hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCH
Q 007903 87 FREAWPYLWAHRGGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDS 165 (585)
Q Consensus 87 ~r~a~~yi~~~r~k~iVIKlGGs~l~~~~-l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rvt~~ 165 (585)
+|+|+|||++||++++||||||+++++++ .+.++++|+.|++.|.++|||||||+++++.+++++++.++.+|+|+|++
T Consensus 2 ~~~~~~yi~~~~~~~~ViKlGGs~i~~~~~~~~~~~~i~~l~~~g~~~ViVhG~g~~~~~~l~~~g~~~~~~~g~r~t~~ 81 (279)
T cd04250 2 LIEALPYIQKFRGKTVVIKYGGNAMKDEELKESFARDIVLLKYVGINPVVVHGGGPEINEMLKKLGIESEFVNGLRVTDE 81 (279)
T ss_pred hhhhhHHHHHHcCCEEEEEEChHHhcCccHHHHHHHHHHHHHHCCCCEEEEcCCcHHHHHHHHHCCCCCEeECCeecCCH
Confidence 79999999999999999999999999876 67999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH-HHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccc---cccccCcceeeEEEecH
Q 007903 166 ESLAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGV---VDGVDYGATGEVKKVDV 241 (585)
Q Consensus 166 ~~l~~~-~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~---~~g~d~g~~G~v~~v~~ 241 (585)
++++++ ++++|++|..|++. |+++|++ ++++++.|++++++++.+. ++++||+++|+++.++.
T Consensus 82 ~~~~~~~~~~~g~ln~~l~~~---------L~~~Gv~----a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~i~~ 148 (279)
T cd04250 82 ETMEIVEMVLVGKVNKEIVSL---------INRAGGK----AVGLSGKDGNLIKAKKKDATVIEEIIDLGFVGEVTEVNP 148 (279)
T ss_pred HHHHHHHHHHcCchHHHHHHH---------HHHcCCC----cceeecCCCCEEEEEECcccccCCCcccCcccceEEEcH
Confidence 999987 44458999999885 4778987 8999999999999999875 57889999999999999
Q ss_pred HHHHHHHcCCCeEEEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccCC----CCcccccccHHHHHHHHH
Q 007903 242 TRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDE----SGHLIRFLTLQEADSLIR 317 (585)
Q Consensus 242 ~~I~~lL~~G~IPVi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~~----~~~lI~~it~~e~~~li~ 317 (585)
+.|+++|+.|.|||++|++++++|+.+|+|+|.+|++||.+|+||+|+|+|||||++. ++++|++++.+|+++++.
T Consensus 149 ~~i~~ll~~g~IPVi~~~~~~~~g~~~~~~~D~~A~~lA~~l~A~~li~ltdv~Gv~~~~p~~~~~i~~i~~~e~~~l~~ 228 (279)
T cd04250 149 ELLETLLEAGYIPVIAPVGVGEDGETYNINADTAAGAIAAALKAEKLILLTDVAGVLDDPNDPGSLISEISLKEAEELIA 228 (279)
T ss_pred HHHHHHHHCCCeEEEcCCccCCCCcEEEeCHHHHHHHHHHHhCCCEEEEEECCcccccCCCCCccccccCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999842 389999999999888764
Q ss_pred hhchhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccc
Q 007903 318 QRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRL 397 (585)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~ 397 (585)
.+. + +| |
T Consensus 229 ~~~-----------------------------~------------------------tG-g------------------- 235 (279)
T cd04250 229 DGI-----------------------------I------------------------SG-G------------------- 235 (279)
T ss_pred cCC-----------------------------C------------------------CC-c-------------------
Confidence 311 1 35 5
Q ss_pred cCcHHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceee
Q 007903 398 NGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 443 (585)
Q Consensus 398 ~~m~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i 443 (585)
|.+||++|..+++.|+.+|+|+||..+++||.++|++++.||+|
T Consensus 236 --m~~Kl~~a~~a~~~g~~~v~I~~g~~~~~ll~~~~~~~~~GT~i 279 (279)
T cd04250 236 --MIPKVEACIEALEGGVKAAHIIDGRVPHSLLLEIFTDEGIGTMI 279 (279)
T ss_pred --hHHHHHHHHHHHHhCCCEEEEeCCCCCchHHHHHhcCCCCccCC
Confidence 89999999999999999999999999999999999999999986
|
In this pathway, glutamate is first N-acetylated and then phosphorylated by NAGK to give phosphoryl NAG, which is converted to NAG-ornithine. There are two variants of this pathway. In one, typified by the pathway in Thermotoga maritima and Pseudomonas aeruginosa, the acetyl group is recycled by reversible transacetylation from acetylornithine to glutamate. The phosphorylation of NAG by NAGK is feedback inhibited by arginine. In photosynthetic organisms, NAGK is the target of the nitrogen-signaling protein PII. Hexameric formation of NAGK domains appears to be essential to both arginine inhibition and NAGK-PII complex formation. NAGK-C are members of the Amino A |
| >KOG2436 consensus Acetylglutamate kinase/acetylglutamate synthase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-47 Score=400.55 Aligned_cols=437 Identities=42% Similarity=0.591 Sum_probs=369.8
Q ss_pred ChhHHHHHHHHhhhHHHhhcCCeEEEEeCCccCCCCChHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccC
Q 007903 79 EDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLG 158 (585)
Q Consensus 79 ~~~~~~~~~r~a~~yi~~~r~k~iVIKlGGs~l~~~~l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~ 158 (585)
.+..++++++|++|||+.||++++||+.+|.++....++.++++++.|+..|.++|||||+++|+++++...++++.|.+
T Consensus 74 s~~~~v~~~~e~l~yi~~~~~q~fvV~~~g~~~~t~~~~sl~s~lafl~h~gl~pIvv~g~~~qin~~l~~~~ie~~y~~ 153 (520)
T KOG2436|consen 74 SSDTTVRILRESLPYITSFRDQKFVVIKSGEAISTSLLHSLASDLAFLHHVGLRPIVVPGTQPQINRLLAERGIEPEYVD 153 (520)
T ss_pred CChhHHHHHHHHHHHHHHhcCceEEEEecccccccchHHHHHHHHHHHhcCCceEEEecCccHHHHHHHHHcCCCccccc
Confidence 56789999999999999999999999999999855558999999999999999999999999999999999999999999
Q ss_pred CccCCCHHHHHHHH-HHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeec--CcceeeeeeccccccccCcceee
Q 007903 159 RYRITDSESLAAAM-EAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVA--SGNFLAAKRKGVVDGVDYGATGE 235 (585)
Q Consensus 159 g~rvt~~~~l~~~~-~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~--dg~~~~a~~~g~~~g~d~g~~G~ 235 (585)
++|+|++.+|+++. ..+++.|..++.. |+++|.. +++.++. .++++.|+++|++++.+|+++|+
T Consensus 154 ~~RvTda~t~q~~~~~~~~E~n~~lv~n---------L~~~g~~----ar~~s~g~~v~~~f~a~~~~v~d~~~y~~~ge 220 (520)
T KOG2436|consen 154 GYRVTDAHTLQAAKESVSLEANLNLVIN---------LSQLGTR----ARPSSSGVRVGNFFPADRNGVLDGEDYGLVGE 220 (520)
T ss_pred ceecccHHHHHHhhhcchhhhhhHHHHH---------HHHhhce----eccccccccccceeecccccccccceeeeecc
Confidence 99999999999984 4778888776664 5778866 3333333 26799999999999999999999
Q ss_pred EEEecHHHHHHHHcCCCeEEEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeec-ccccCCCCcccccccHHHHHH
Q 007903 236 VKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIID-GPILDESGHLIRFLTLQEADS 314 (585)
Q Consensus 236 v~~v~~~~I~~lL~~G~IPVi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTD-V~gl~~~~~lI~~it~~e~~~ 314 (585)
|.+++.+.|+.+++.|.+|++++++.+.+|+++|||+|++|.+||.+|+|+++++++| .++++++++.++.++.+|.+.
T Consensus 221 i~~vd~d~i~~l~~~G~mp~L~sla~TaSGqvlnvNa~~~a~elA~~L~~~kli~l~d~g~~l~e~ge~~S~l~l~~e~~ 300 (520)
T KOG2436|consen 221 IKKVDVDRIRHLLDAGSMPLLRSLAATASGQVLNVNADEVAGELALALGPDKLILLMDKGRILKENGEDISSLILQEEDA 300 (520)
T ss_pred cceechhhhhhhhhCCCchhehhhcccCccceEEeeHHHHhhHHHhccCcceeEEecccccccccCcccccccccchhHh
Confidence 9999999999999999999999999999999999999999999999999999999999 557789999999999999999
Q ss_pred HHHhhchhhhHHHHHHhhhhcccccccC-CCCCCCcccccCC-CCccc--cchhccccCCccccCCCCCccccccccccc
Q 007903 315 LIRQRVKQSEIAANYVKAVAEEDITCFG-HSDSIGSVYSSQN-GKTFS--ERRIATFNNGVGFDNGNGLWSSEQGFAIGG 390 (585)
Q Consensus 315 li~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~ 390 (585)
+++....|+.+|+++++++-+.....+. +.++++.++.-.+ .++.. .....++++|.++..|+++|+..++||+++
T Consensus 301 ~l~k~~qq~~~a~~~v~aV~~~~~~~~p~~~s~~i~~~t~~n~~~~~~te~G~~t~~~~gv~~~k~~sl~~~~~~~al~~ 380 (520)
T KOG2436|consen 301 GLRKPSQQKNIAANNVKAVKDGIDSSLPRPSSYNIAITTQQNLIKELFTEKGAGTLISGGVGINKGNSLISQSFKRALDL 380 (520)
T ss_pred hhhhhhhhcccccccchhhhhheeeccCcCCCCCcceeecccccceeeccCCCCccccCceeeecCcccccchhhhhcch
Confidence 9999999999999999999877655222 2223455332111 12222 337889999999999999999999999999
Q ss_pred ccccccccCcHHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeeccccccccccccccCHHHHHHHHHHHH
Q 007903 391 QERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLV 470 (585)
Q Consensus 391 ~~~~~~~~~m~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~~d~~~~IR~at~~D~~~I~~Li~~~~ 470 (585)
+++++|.+|.++++.+|-+.|..++++++..||+..++++++.|.+.+.||+. .+-+..++.+-.+|+++|....++..
T Consensus 381 ~~~~~rln~~lse~i~a~~~~~~~i~~~~~~D~~~e~V~~ldkf~~~~~~~~~-~~V~d~ifn~~~~dfp~i~wr~r~~~ 459 (520)
T KOG2436|consen 381 EEYIDRLNGSLSELIAAGDYCGGAIKTYELSDGTNEGVLYLDKFAVSGMGTGS-SDVSDGIFNVMVEDFPEILWRSRPLN 459 (520)
T ss_pred HHHHHHhhchHHHHHHHHHHhccceEEEEccCCCcccceeeeecccCCccccc-chhhHHHHHHHHHhhhhheeeccccc
Confidence 99999999999999999999999999999999999999999999999999998 67777889999999998877655544
Q ss_pred Hcccc-ccCCHHHHHhccCeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCCcCCcHHHHHH
Q 007903 471 ESGAL-VRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLL 535 (585)
Q Consensus 471 ~~~~~-~~~~~e~l~~~i~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGkGIGk~LL 535 (585)
..... ..++.+.+. ..+.+++.+-+++++.++.+.++. ++..+.|.++.|+++.+.+++
T Consensus 460 ~~~~w~f~rs~g~L~-~~~~~lfwyg~~~i~~~a~~~~~~-----~v~~~~~~~d~~~s~~n~k~~ 519 (520)
T KOG2436|consen 460 EVNKWYFRRSEGSLR-ALDFKLFWYGEGQIIKCAALFQFF-----EVAAMSVASDIRPSWQNDKLL 519 (520)
T ss_pred ccceEEEeccHHHHh-ccCcEEEEecCcHHHHHHHhhhhh-----HHHHhhhccccCccccCCCCC
Confidence 43322 223333333 446667777888999988887543 577888999999988776553
|
|
| >PRK04531 acetylglutamate kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-43 Score=376.08 Aligned_cols=316 Identities=22% Similarity=0.258 Sum_probs=253.0
Q ss_pred CCCCChhHHHHHHHHhhhHHHhhcCCeEEEEeCCccCCCCChHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcc
Q 007903 75 YNPVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEA 154 (585)
Q Consensus 75 ~~~~~~~~~~~~~r~a~~yi~~~r~k~iVIKlGGs~l~~~~l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~ 154 (585)
|++++..+|+++||++.|| +++|||+||+++.+ .++.++++|++|+..|.++|||||||||+++.++++|+++
T Consensus 18 ~~~~e~~~~l~~F~~~~~~------~~~VIKiGG~~l~~-~~~~l~~dla~L~~~G~~~VlVHGggpqI~~~l~~~gie~ 90 (398)
T PRK04531 18 ASAKEISQYLKRFSQLDAE------RFAVIKVGGAVLRD-DLEALASSLSFLQEVGLTPIVVHGAGPQLDAELDAAGIEK 90 (398)
T ss_pred CChhhhHHHHHHHhCcCCC------cEEEEEEChHHhhc-CHHHHHHHHHHHHHCCCcEEEEECCCHHHHHHHHHcCCCc
Confidence 5556667777777777766 99999999999985 4899999999999999999999999999999999999999
Q ss_pred cccCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCccee
Q 007903 155 KYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATG 234 (585)
Q Consensus 155 ~~~~g~rvt~~~~l~~~~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G 234 (585)
+|++|+|+|++++|+++..+.+++|..|++
T Consensus 91 ~~v~G~RVTd~~tl~vv~~~l~~vn~~lv~-------------------------------------------------- 120 (398)
T PRK04531 91 ETVNGLRVTSPEALAIVRKVFQRSNLDLVE-------------------------------------------------- 120 (398)
T ss_pred EEECCEecCCHHHHHHHHHHHHHHHHHHHH--------------------------------------------------
Confidence 999999999999999986666687765533
Q ss_pred eEEEecHHHHHHHHcCCCeEEEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC-CCCcccccccH-HHH
Q 007903 235 EVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-ESGHLIRFLTL-QEA 312 (585)
Q Consensus 235 ~v~~v~~~~I~~lL~~G~IPVi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~-~~~~lI~~it~-~e~ 312 (585)
.|+.+|+.|+|||++|++.+++|+++|+|+|.+|++||.+|+|+||||+||++|+. .+|++|++++. +++
T Consensus 121 --------~I~~~L~~g~IPVlsplg~~~~G~~~NvnaD~vA~~LA~aL~a~KLIfltdv~GV~d~~g~~i~~i~~~~e~ 192 (398)
T PRK04531 121 --------AVESSLRAGSIPVIASLGETPSGQILNINADVAANELVSALQPYKIIFLTGTGGLLDADGKLISSINLSTEY 192 (398)
T ss_pred --------HHHHHHHCCCEEEEeCcEECCCCcEEEECHHHHHHHHHHHcCCCEEEEEECCCCccCCCCCCcccCCHHHHH
Confidence 17789999999999999999999999999999999999999999999999999984 68999999997 577
Q ss_pred HHHHHhhchhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCccccccccccccc
Q 007903 313 DSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQE 392 (585)
Q Consensus 313 ~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~ 392 (585)
+.++..+ .++ | |
T Consensus 193 ~~l~~~~-----------------------------~vt------------------------g-G-------------- 204 (398)
T PRK04531 193 DHLMQQP-----------------------------WIN------------------------G-G-------------- 204 (398)
T ss_pred HHHHhcC-----------------------------CCC------------------------c-c--------------
Confidence 7776431 122 4 5
Q ss_pred ccccccCcHHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeeccccc-cccccccccCHHHHHHHHHHHHH
Q 007903 393 RLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLY-EGTRTAKVTDLSGIKQIIQPLVE 471 (585)
Q Consensus 393 ~~~~~~~m~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~~d~~-~~IR~at~~D~~~I~~Li~~~~~ 471 (585)
|.+||++|..+++ +++++|+++++.+++|+.|||+++|.||+|.+... ...+....-|.+.+.+++.
T Consensus 205 -------M~~KL~~a~~al~-~~~~~~~V~i~~~~~Ll~eLft~~G~GT~I~~g~~i~~~~~~~~~d~~~l~~ll~---- 272 (398)
T PRK04531 205 -------MKLKLEQIKELLD-RLPLESSVSITSPSDLAKELFTHKGSGTLVRRGERILRATDWDELDLERLNLLIE---- 272 (398)
T ss_pred -------HHHHHHHHHHHHh-CCCcEEEEEecCCCHHHHHHccCCCCCeEEecCCceeeeCChhhcCHHHHHHHHh----
Confidence 8999999999996 46679999999999999999999999999988643 2223333448888888852
Q ss_pred ccccccCCHHHHHhccCeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCCcCCcHHHHHHHHHH
Q 007903 472 SGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCI 539 (585)
Q Consensus 472 ~~~~~~~~~e~l~~~i~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~ 539 (585)
..+..... +.+.+.. ..+-+..++..=|.+.+. ..+...++..++|.+..||.|++..+++.+.
T Consensus 273 ~sf~r~~~-~~y~~~~-~~~~~y~~~~y~~~Aiv~--~~~~~~~Ldkf~v~~~~~~~~v~d~vf~~~~ 336 (398)
T PRK04531 273 SSFGRTLK-PDYFDTT-QLLRAYVSENYRAAAILT--ETGGGPYLDKFAVLDDARGEGLGRAVWNVMR 336 (398)
T ss_pred hhcccchH-HHHhccC-CceEEEEeCCCcEEEEEe--cCCCceEeEEEEEccchhhcChHHHHHHHHH
Confidence 22221111 2222222 222233344444454444 2356889999999999999999999999998
|
|
| >cd04252 AAK_NAGK-fArgBP AAK_NAGK-fArgBP: N-Acetyl-L-glutamate kinase (NAGK) of the fungal arginine-biosynthetic pathway (fArgBP) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-43 Score=357.00 Aligned_cols=243 Identities=27% Similarity=0.403 Sum_probs=216.1
Q ss_pred EEEeCCccCCCCChHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHHHHHHhHHHHHH
Q 007903 103 VVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMI 182 (585)
Q Consensus 103 VIKlGGs~l~~~~l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~~~~~G~i~~~L 182 (585)
|||+||+++++. ++.+++||+.|+..|.++|||||||+|+++.++++|++++|++|+|+|++++|+.+..+++++|..|
T Consensus 2 ViKiGG~~~~~~-l~~~~~di~~l~~~g~~~VlVHGgg~~i~~~~~~~gi~~~~~~g~RvT~~~~l~~v~~al~~vn~~i 80 (248)
T cd04252 2 VIKVGGAIIEDD-LDELAASLSFLQHVGLYPIVVHGAGPQLNEELEAAGVEPEYVDGLRVTDPETLAVARKVFLEENLKL 80 (248)
T ss_pred EEEEChhhhhcc-HHHHHHHHHHHHHCCCcEEEEeCCCHHHHHHHHHcCCCcEeeCCcccCCHHHHHHHHHHHHHHHHHH
Confidence 899999999875 8999999999999999999999999999999999999999999999999999999977778999999
Q ss_pred HHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHHcCCCeEEEcCCccC
Q 007903 183 EAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYS 262 (585)
Q Consensus 183 ~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL~~G~IPVi~~v~~~ 262 (585)
++.| .++|++ ++++++ + ++.+++ .++.|||++|+|+++|.+.|+.+|+.|+|||++|++++
T Consensus 81 v~~l---------~~~g~~----a~~l~~--~-~~~a~~---~~~~d~g~~G~v~~i~~~~i~~~L~~g~IPVi~p~~~~ 141 (248)
T cd04252 81 VEAL---------ERNGAR----ARPITS--G-VFEAEY---LDKDKYGLVGKITGVNKAPIEAAIRAGYLPILTSLAET 141 (248)
T ss_pred HHHH---------HhCCCC----cccccC--c-eEEEEE---CcCccCCccCceeeECHHHHHHHHHCCCeEEECCceEC
Confidence 9864 678887 677764 2 557766 46789999999999999999999999999999999999
Q ss_pred CCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC-CCCcccccccH-HHHHHHHHhhchhhhHHHHHHhhhhcccccc
Q 007903 263 SSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-ESGHLIRFLTL-QEADSLIRQRVKQSEIAANYVKAVAEEDITC 340 (585)
Q Consensus 263 ~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~-~~~~lI~~it~-~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~ 340 (585)
++|+++|+|+|++|++||.+|+|++|||+||+||+. .++++|++++. +++++++..+
T Consensus 142 ~~g~~~nvnaD~~A~~lA~aL~a~kli~ltdv~GV~~~~g~~i~~i~~~~~~~~l~~~~--------------------- 200 (248)
T cd04252 142 PSGQLLNVNADVAAGELARVLEPLKIVFLNETGGLLDGTGKKISAINLDEEYDDLMKQP--------------------- 200 (248)
T ss_pred CCCCEEEECHHHHHHHHHHHcCCCeEEEEECCcccCCCCCCcccccCHHHHHHHHHHcC---------------------
Confidence 999999999999999999999999999999999985 46899999997 4677777431
Q ss_pred cCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccCcHHHHHHHHHHHHc--CCCeE
Q 007903 341 FGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRR--GVQRV 418 (585)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~~kl~aa~~a~~~--Gv~~v 418 (585)
.+| | | |.+||++|..+.+. |+..+
T Consensus 201 --------~vt------------------------g-G---------------------M~~Kl~~~~~~~~~~~~~~~v 226 (248)
T cd04252 201 --------WVK------------------------Y-G---------------------TKLKIKEIKELLDTLPRSSSV 226 (248)
T ss_pred --------CcC------------------------C-c---------------------hHHHHHHHHHHHHhCCCceEE
Confidence 133 5 5 89999988888877 67778
Q ss_pred EEecCccchhhHHHHHhcCCCceee
Q 007903 419 HLLDGTIGGVLLLELFKRDGMGTMV 443 (585)
Q Consensus 419 ~I~~g~~~~~ll~el~~~~~~GT~i 443 (585)
+|++ +++|+.|||+++|.||+|
T Consensus 227 ~i~~---~~~ll~elf~~~g~GT~i 248 (248)
T cd04252 227 SITS---PDDLQKELFTHSGAGTLI 248 (248)
T ss_pred EEEC---CchHHHHHhcCCCCCccC
Confidence 8888 588999999999999986
|
The nuclear-encoded, mitochondrial polyprotein precursor with an N-terminal NAGK (ArgB) domain (this CD), a central DUF619 domain, and a C-terminal reductase domain (ArgC, N-Acetylglutamate Phosphate Reductase, NAGPR). The precursor is cleaved in the mitochondria into two distinct enzymes (NAGK-DUF619 and NAGPR). Native molecular weights of these proteins indicate that the kinase is an octamer whereas the reductase is a dimer. This CD also includes some gamma-proteobacteria (Xanthomonas and Xylella) NAG kinases with an N-terminal NAGK (ArgB) domain (this CD) and a C-terminal DUF619 domain. The DUF619 domain is described as a putative distant homolog of the acetyltransferase, ArgA, predicted to function in NAG synthase association in fungi. Eukaryotic sequences have an N-terminal mitochondrial transit peptide. Members of this NAG kinase domain CD belong to th |
| >cd04238 AAK_NAGK-like AAK_NAGK-like: N-Acetyl-L-glutamate kinase (NAGK)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-42 Score=348.18 Aligned_cols=253 Identities=32% Similarity=0.525 Sum_probs=231.2
Q ss_pred EEEEeCCccCCCCC-hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHHHHHH-hHHH
Q 007903 102 FVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAA-GGIR 179 (585)
Q Consensus 102 iVIKlGGs~l~~~~-l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~~~~~-G~i~ 179 (585)
+|||+||+++++++ +..++++|+.|+..|.++|||||+|++++.++++++++.++.+++|+|++++|+.+..++ |++|
T Consensus 1 ~ViKlGGs~l~~~~~~~~~~~~i~~l~~~g~~~VlVhG~g~~~~~~~~~~~~~~~~~~~~r~t~~~~l~~~~~a~~g~ln 80 (256)
T cd04238 1 VVIKYGGSAMKDEELKEAFADDIVLLKQVGINPVIVHGGGPEINELLKRLGIESEFVNGLRVTDKETMEIVEMVLAGKVN 80 (256)
T ss_pred CEEEEChHHhcCccHHHHHHHHHHHHHHCCCCEEEECCCcHHHHHHHHHCCCCCEeECCeecCCHHHHHHHHHHHcCchH
Confidence 59999999999887 799999999999999999999999999999999999999999999999999999886565 9999
Q ss_pred HHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHHcCCCeEEEcCC
Q 007903 180 MMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL 259 (585)
Q Consensus 180 ~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL~~G~IPVi~~v 259 (585)
..|++. |+++|++ ++++++.|+++++++++| .+++||+|+|+++.++.+.|+.+|++|+|||++|+
T Consensus 81 ~~i~~~---------L~~~Gv~----a~~l~~~~~~~~~~~~~~-~~~~~~~~~g~i~~i~~~~l~~ll~~g~ipVv~~~ 146 (256)
T cd04238 81 KELVSL---------LNRAGGK----AVGLSGKDGGLIKAEKKE-EKDIDLGFVGEVTEVNPELLETLLEAGYIPVIAPI 146 (256)
T ss_pred HHHHHH---------HHhCCCC----CCCcccccCCEEEEEECC-CCCCCcccccceEEECHHHHHHHHHCCCEEEECCc
Confidence 999886 4778987 789999999999999988 88899999999999999999999999999999999
Q ss_pred ccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccCC-CCcccccccHHHHHHHHHhhchhhhHHHHHHhhhhcccc
Q 007903 260 GYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDE-SGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDI 338 (585)
Q Consensus 260 ~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~~-~~~lI~~it~~e~~~li~~~~~~~~~~~~~~~~~~~~~~ 338 (585)
+++++|+++|+|+|.+|++||.+|+||+|+|+|||+|++. ++++|++++.+|+++++..+.
T Consensus 147 ~~~~~g~~~~~~~D~~A~~lA~~l~a~~li~ltdv~Gv~~~~~~~i~~i~~~e~~~~~~~~~------------------ 208 (256)
T cd04238 147 AVDEDGETYNVNADTAAGAIAAALKAEKLILLTDVPGVLDDPGSLISELTPKEAEELIEDGV------------------ 208 (256)
T ss_pred EECCCCcEEEECHHHHHHHHHHHcCCCEEEEEeCCccccCCCCCccccCCHHHHHHHHHcCC------------------
Confidence 9999999999999999999999999999999999999854 589999999988888764211
Q ss_pred cccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccCcHHHHHHHHHHHHcCCCeE
Q 007903 339 TCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRV 418 (585)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~~kl~aa~~a~~~Gv~~v 418 (585)
+ +| | |.+||++|..+++.|+.++
T Consensus 209 -----------~------------------------~g-g---------------------m~~Kl~~a~~~~~~g~~~v 231 (256)
T cd04238 209 -----------I------------------------SG-G---------------------MIPKVEAALEALEGGVRKV 231 (256)
T ss_pred -----------C------------------------CC-C---------------------hHHHHHHHHHHHHhCCCEE
Confidence 1 35 5 8999999999999999999
Q ss_pred EEecCccchhhHHHHHhcCCCceee
Q 007903 419 HLLDGTIGGVLLLELFKRDGMGTMV 443 (585)
Q Consensus 419 ~I~~g~~~~~ll~el~~~~~~GT~i 443 (585)
+|++|..++.|+.+++.+++.||+|
T Consensus 232 ~I~~g~~~~~l~~~l~~~~~~GT~i 256 (256)
T cd04238 232 HIIDGRVPHSLLLELFTDEGIGTMI 256 (256)
T ss_pred EEeCCCCCcHHHHHHhcCCCCCCCC
Confidence 9999999999999998778899986
|
Included in this CD are the Escherichia coli and Pseudomonas aeruginosa type NAGKs which catalyze the phosphorylation of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in bacteria and photosynthetic organisms using either the acetylated, noncyclic (NC), or non-acetylated, cyclic (C) route of ornithine biosynthesis. Also included in this CD is a distinct group of uncharacterized (UC) bacterial and archeal NAGKs. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK). |
| >cd04236 AAK_NAGS-Urea AAK_NAGS-Urea: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the urea cycle found in animals | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-42 Score=348.30 Aligned_cols=254 Identities=19% Similarity=0.217 Sum_probs=211.6
Q ss_pred CCCChhHHHHHHHHhhhHHHhhcCCeEEEEeCCccCCCCC-hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcc
Q 007903 76 NPVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEA 154 (585)
Q Consensus 76 ~~~~~~~~~~~~r~a~~yi~~~r~k~iVIKlGGs~l~~~~-l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~ 154 (585)
+++|.++|.+.|..+.|+- ..+.+|||+||+++.+++ ++++++||++|+..|.++||||||||+++..++ +.
T Consensus 15 ~~~e~~~~l~~f~~~~~~~---~~~f~VIK~GG~~~~~~~~~~~l~~dla~L~~lGl~~VlVHGggp~i~~~l~----~~ 87 (271)
T cd04236 15 DPREARYWLTQFQIAMPND---WPAFAVLEVDHSVFRSLEMVQSLSFGLAFLQRMDMKLLVVMGLSAPDGTNMS----DL 87 (271)
T ss_pred CHHHHHHHHHHhhccCCCC---CCCEEEEEEChhhhcCchhHHHHHHHHHHHHHCCCeEEEEeCCChHHhhhhc----CC
Confidence 3444555555555543331 126899999999997655 899999999999999999999999999998876 22
Q ss_pred cccCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCccee
Q 007903 155 KYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATG 234 (585)
Q Consensus 155 ~~~~g~rvt~~~~l~~~~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G 234 (585)
++.. +-+... +.|..|++.| +++|++ ++++++. ++++.|++ ..|+|++|
T Consensus 88 ~~~~-----------~~~v~~-~~n~~Lv~~L---------~~~G~~----A~gl~g~-~~~i~a~~-----~~d~g~vG 136 (271)
T cd04236 88 ELQA-----------ARSRLV-KDCKTLVEAL---------QANSAA----AHPLFSG-ESVLQAEE-----PEPGASKG 136 (271)
T ss_pred cchh-----------eehhHH-HHHHHHHHHH---------HhCCCC----eeeecCc-cceEEEEE-----cccCCccc
Confidence 2211 112334 7888888864 778887 8999987 58999987 25889999
Q ss_pred eEEEecHHHHHHHHcCCCeEEEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeeccccc-CCCCcccccccH-HHH
Q 007903 235 EVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPIL-DESGHLIRFLTL-QEA 312 (585)
Q Consensus 235 ~v~~v~~~~I~~lL~~G~IPVi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl-~~~~~lI~~it~-~e~ 312 (585)
+|+++|.+.|+.+|++|+|||++|+++|.+|+++|+|+|++|++||.+|+|+||||+||++|+ +.++++|++++. +|+
T Consensus 137 ~V~~Vd~~~I~~lL~~g~IPVisplg~~~~G~~~NiNaD~~A~~lA~aL~A~KLIfltd~~GV~~~~g~lI~~l~~~~e~ 216 (271)
T cd04236 137 PSVSVDTELLQWCLGSGHIPLVCPIGETSSGRSVSLDSSEVTTAIAKALQPIKVIFLNRSGGLRDQKHKVLPQVHLPADL 216 (271)
T ss_pred eEEEECHHHHHHHHhCCCeEEECCceECCCCCEEEECHHHHHHHHHHHcCCCEEEEEeCCcceECCCCCCccccCcHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999998 567999999995 899
Q ss_pred HHHHHhhchhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCccccccccccccc
Q 007903 313 DSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQE 392 (585)
Q Consensus 313 ~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~ 392 (585)
++|++++. ++ | ||.+|
T Consensus 217 ~~li~~g~-----------------------------i~------------------------g-Gm~~k---------- 232 (271)
T cd04236 217 PSLSDAEW-----------------------------LS------------------------E-TEQNR---------- 232 (271)
T ss_pred HHHHhCCE-----------------------------Ec------------------------C-Ceeec----------
Confidence 99997643 43 5 63222
Q ss_pred ccccccCcHHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceee
Q 007903 393 RLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 443 (585)
Q Consensus 393 ~~~~~~~m~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i 443 (585)
++|+++|+.++..|++ |||+| +++|+.|+|++.|.||+|
T Consensus 233 --------i~ki~~~l~~l~~g~s-v~I~~---~~~ll~elft~~g~GT~~ 271 (271)
T cd04236 233 --------IQDIATLLNALPSMSS-AVITS---AETLLTELFSHKGSGTLF 271 (271)
T ss_pred --------hHHHHHHHHhcccCCe-EEEeC---hHHHHHHHhccCCCCCcC
Confidence 8899999999999999 99998 788999999999999986
|
Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate; NAG is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Ureogenic NAGS activity is dependent on the concentration of glutamate (substrate) and arginine (activator). Domain architecture of ureogenic NAGS consists of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal DUF619 domain. Members of this CD belong to the protein superfamily, the Amino Acid Kinase Family (AAKF). |
| >PRK14058 acetylglutamate/acetylaminoadipate kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-41 Score=342.89 Aligned_cols=250 Identities=31% Similarity=0.430 Sum_probs=221.1
Q ss_pred eEEEEeCCccCCCCChHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccC---C--ccCCCHHHHHHHHHHH
Q 007903 101 TFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLG---R--YRITDSESLAAAMEAA 175 (585)
Q Consensus 101 ~iVIKlGGs~l~~~~l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~---g--~rvt~~~~l~~~~~~~ 175 (585)
++|||+||+++.++ ..++++|+.|+..|.++|||||||+++++.++++|++++|++ | +|+|++++|+.+..++
T Consensus 1 ~~ViK~GG~~l~~~--~~~~~~i~~l~~~g~~~VlVHGgg~~i~~~~~~~gi~~~~~~~~~g~~~rvt~~~~l~~~~~a~ 78 (268)
T PRK14058 1 MIVVKIGGSVGIDP--EDALIDVASLWADGERVVLVHGGSDEVNELLERLGIEPRFVTSPSGVTSRYTDRETLEVFIMAM 78 (268)
T ss_pred CEEEEEChHHhhCc--HHHHHHHHHHHHCCCCEEEEeCCHHHHHHHHHHcCCCceEEeCCCCCceEeCCHHHHHHHHHHH
Confidence 58999999999885 578999999999999999999999999999999999999987 6 8999999999987777
Q ss_pred hHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeecc----cccc----ccCcceeeEEEecHHHHHHH
Q 007903 176 GGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKG----VVDG----VDYGATGEVKKVDVTRMRER 247 (585)
Q Consensus 176 G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g----~~~g----~d~g~~G~v~~v~~~~I~~l 247 (585)
+++|..|++.| +++|++ ++++++.|.++++++++. +.+| .|++|+|+|+.++.+.|+.+
T Consensus 79 ~~ln~~lv~~L---------~~~Gv~----a~~l~~~~~~l~~~~~~~~~~~~~~g~~~~~d~g~~g~v~~v~~~~i~~l 145 (268)
T PRK14058 79 ALINKQLVERL---------QSLGVN----AVGLSGLDGGLLEGKRKKAVRVVEEGKKKIIRGDYTGKIEEVNTDLLKLL 145 (268)
T ss_pred HHHHHHHHHHH---------HhCCCC----ccccCcccCCEEEEEEecccccccCCcceeccCCceeEEEEECHHHHHHH
Confidence 79999999864 678987 899999998888876542 2333 68999999999999999999
Q ss_pred HcCCCeEEEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC----CCCcccccccHHHHHHHHHhhchhh
Q 007903 248 LDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD----ESGHLIRFLTLQEADSLIRQRVKQS 323 (585)
Q Consensus 248 L~~G~IPVi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~----~~~~lI~~it~~e~~~li~~~~~~~ 323 (585)
|+.|+|||++|++++.+|+.+|+|+|.+|++||.+|+||+|+|+|||||++ +++++|++++.+|+++++..
T Consensus 146 l~~g~iPVi~~~~~~~~g~~~~i~~D~~A~~lA~~l~A~~li~ltdv~Gv~~~~p~~~~~i~~i~~~e~~~l~~~----- 220 (268)
T PRK14058 146 LKAGYLPVVAPPALSEEGEPLNVDGDRAAAAIAGALKAEALVLLSDVPGLLRDPPDEGSLIERITPEEAEELSKA----- 220 (268)
T ss_pred HHCCCEEEEeCceECCCCcEEecCHHHHHHHHHHHcCCCEEEEEeCChhhccCCCCCCcCccCcCHHHHHHHhhc-----
Confidence 999999999999988889999999999999999999999999999999984 34889999998888776421
Q ss_pred hHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccCcHHH
Q 007903 324 EIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSE 403 (585)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~~k 403 (585)
+ +| | |.+|
T Consensus 221 --------------------------~------------------------tG-g---------------------M~~K 228 (268)
T PRK14058 221 --------------------------A------------------------GG-G---------------------MKKK 228 (268)
T ss_pred --------------------------c------------------------CC-c---------------------cHHH
Confidence 1 35 5 8999
Q ss_pred HHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeecc
Q 007903 404 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (585)
Q Consensus 404 l~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~~ 445 (585)
|++|..|++.|++++||+||+.++.|+.++ +|.||+|.+
T Consensus 229 l~aa~~a~~~Gv~~v~I~~g~~~~~l~~~l---~G~GT~I~~ 267 (268)
T PRK14058 229 VLMAAEAVEGGVGRVIIADANVDDPISAAL---AGEGTVIVN 267 (268)
T ss_pred HHHHHHHHHcCCCEEEEEcCCCcchHHHHh---CCCceEEec
Confidence 999999999999999999999999977766 456999864
|
|
| >cd04251 AAK_NAGK-UC AAK_NAGK-UC: N-Acetyl-L-glutamate kinase - uncharacterized (NAGK-UC) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-40 Score=339.18 Aligned_cols=244 Identities=34% Similarity=0.473 Sum_probs=216.6
Q ss_pred EEEEeCCccCCCCChHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccC---C--ccCCCHHHHHHHHHHHh
Q 007903 102 FVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLG---R--YRITDSESLAAAMEAAG 176 (585)
Q Consensus 102 iVIKlGGs~l~~~~l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~---g--~rvt~~~~l~~~~~~~G 176 (585)
+|||+||+++++ ++.++++|+.| |.++|||||||+++++.+++++++++|++ | .|+|++++|+++..+++
T Consensus 1 ~VIKlGGs~l~~--~~~~~~~i~~l---g~~~VlVHGgg~~i~~~~~~~gi~~~~~~~~~G~~~Rvt~~~~l~~~~~a~~ 75 (257)
T cd04251 1 IVVKIGGSVVSD--LDKVIDDIANF---GERLIVVHGGGNYVNEYLKRLGVEPKFVTSPSGIRSRYTDKETLEVFVMVMG 75 (257)
T ss_pred CEEEEChHHhhC--hHHHHHHHHHc---CCCEEEECCCHHHHHHHHHHcCCCcEEEeCCCCCccccCCHHHHHHHHHHHH
Confidence 599999999986 67899999988 89999999999999999999999999985 7 49999999999976679
Q ss_pred HHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeec--------cccccccCcceeeEEEecHHHHHHHH
Q 007903 177 GIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRK--------GVVDGVDYGATGEVKKVDVTRMRERL 248 (585)
Q Consensus 177 ~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~--------g~~~g~d~g~~G~v~~v~~~~I~~lL 248 (585)
++|..|++.| +++|++ ++++++.|++++.+++. |.....|++|+|+|+.+|.+.|+.+|
T Consensus 76 ~ln~~iv~~L---------~~~Gi~----a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~G~v~~v~~~~i~~ll 142 (257)
T cd04251 76 LINKKIVARL---------HSLGVK----AVGLTGLDGRLLEAKRKEIVRVNERGRKMIIRGGYTGKVEKVNSDLIEALL 142 (257)
T ss_pred HHHHHHHHHH---------HhCCCC----ceecccccCCEEEEEEeecccccccCcccccCCcceEEEEEEcHHHHHHHH
Confidence 9999999864 678987 89999999999988765 22234588999999999999999999
Q ss_pred cCCCeEEEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccCCCCcccccccHHHHHHHHHhhchhhhHHHH
Q 007903 249 DGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQRVKQSEIAAN 328 (585)
Q Consensus 249 ~~G~IPVi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~~~~~lI~~it~~e~~~li~~~~~~~~~~~~ 328 (585)
+.|+|||++|++++.+|+++|+|+|.+|++||.+|+||+|+|+||+||++.++++|++++.+|+++++..
T Consensus 143 ~~g~vpVi~~~~~~~~G~~~~i~~D~~A~~lA~~L~A~~li~~tdv~Gv~~~~~~i~~i~~~e~~~l~~~---------- 212 (257)
T cd04251 143 DAGYLPVVSPVAYSEEGEPLNVDGDRAAAAIAAALKAERLILLTDVEGLYLDGRVIERITVSDAESLLEK---------- 212 (257)
T ss_pred hCCCeEEEeCcEECCCCcEEecCHHHHHHHHHHHcCCCEEEEEeCChhheeCCcccCccCHHHHHHHHhh----------
Confidence 9999999999999999999999999999999999999999999999999777999999999998888622
Q ss_pred HHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccCcHHHHHHHH
Q 007903 329 YVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAA 408 (585)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~~kl~aa~ 408 (585)
+ +| | |.+||++|.
T Consensus 213 ---------------------~------------------------~g-g---------------------m~~Kl~aa~ 225 (257)
T cd04251 213 ---------------------A------------------------GG-G---------------------MKRKLLAAA 225 (257)
T ss_pred ---------------------C------------------------CC-c---------------------hHHHHHHHH
Confidence 1 24 5 899999999
Q ss_pred HHHHcCCCeEEEecCccchhhHHHHHhcCCCceee
Q 007903 409 FVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 443 (585)
Q Consensus 409 ~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i 443 (585)
.|++.|++++||+||+.++. |.+++. |.||.|
T Consensus 226 ~a~~~gv~~v~i~~g~~~~~-l~~~l~--g~gT~i 257 (257)
T cd04251 226 EAVEGGVREVVIGDARADSP-ISSALN--GGGTVI 257 (257)
T ss_pred HHHHcCCCEEEEecCCCccH-HHHHHc--CCCcCC
Confidence 99999999999999999987 455554 468875
|
This domain is similar to Escherichia coli and Pseudomonas aeruginosa NAGKs which catalyze the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis. These uncharacterized domain sequences are found in some bacteria (Deinococci and Chloroflexi) and archea and belong to the Amino Acid Kinase Superfamily (AAK). |
| >cd04249 AAK_NAGK-NC AAK_NAGK-NC: N-Acetyl-L-glutamate kinase - noncyclic (NAGK-NC) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis using the acetylated, noncyclic route of ornithine biosynthesis | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=338.25 Aligned_cols=248 Identities=24% Similarity=0.345 Sum_probs=223.1
Q ss_pred EEEEeCCccCCCCC-hHHHHHHHHHHH-HCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHHHHH-HhHH
Q 007903 102 FVVIISGEIVSSPY-LDPILKDIAFLH-HLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEA-AGGI 178 (585)
Q Consensus 102 iVIKlGGs~l~~~~-l~~l~~~Ia~L~-~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~~~~-~G~i 178 (585)
+|||+||+++++++ ++.++++|+.+. ..|.++|||||+|++++++++++++++++.+|+|+|++++++++..+ .+++
T Consensus 1 ~ViK~GGs~l~~~~~~~~~~~~i~~~~~~~~~~iVlVhGgg~~~~~~~~~~g~~~~~~~g~rvt~~~~l~~~~~~~~~~~ 80 (252)
T cd04249 1 LVIKLGGALLETEAALEQLFSALSEYQQQHNRQLVIVHGGGCVVDELLKKLNFPSEKKNGLRVTPKEQIPYITGALAGTA 80 (252)
T ss_pred CEEEEChHHhcChhhHHHHHHHHHHHHHhCCCCEEEECCCCHHHHHHHHHcCCCCEEECCEecCCHHHHHHHHHHHcCcc
Confidence 58999999998876 889999999885 46789999999999999999999999999999999999999998544 5899
Q ss_pred HHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHHcCCCeEEEcC
Q 007903 179 RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSN 258 (585)
Q Consensus 179 ~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL~~G~IPVi~~ 258 (585)
|..+++.+ .++|++ ++++++.|++++++++.+ .|++++|+|+.+|.+.|+.+|+.|+|||++|
T Consensus 81 n~~lv~~l---------~~~Gv~----a~~l~~~~~~~~~~~~~~----~~~~~~G~v~~i~~~~l~~ll~~g~ipVi~~ 143 (252)
T cd04249 81 NKQLMAQA---------IKAGLK----PVGLSLADGGMTAVTQLD----PELGAVGKATANDPSLLNDLLKAGFLPIISS 143 (252)
T ss_pred cHHHHHHH---------HhCCCC----ceeeeccCCCEEEEEEcC----CCCCcccceEEEcHHHHHHHHHCCCEEEECC
Confidence 99998864 578987 899999999999998864 5899999999999999999999999999999
Q ss_pred CccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC-CCCcccccccHHHHHHHHHhhchhhhHHHHHHhhhhccc
Q 007903 259 LGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEED 337 (585)
Q Consensus 259 v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~-~~~~lI~~it~~e~~~li~~~~~~~~~~~~~~~~~~~~~ 337 (585)
++++++|+++|+|+|.+|++||.+|+|| +||+|||||++ .++++|++++.+|+++++..+.
T Consensus 144 ~g~~~~g~~~~~~~D~~A~~lA~~l~A~-~i~ltdv~Gv~~~~~~~i~~i~~~e~~~~~~~g~----------------- 205 (252)
T cd04249 144 IGADDQGQLMNVNADQAATAIAQLLNAD-LVLLSDVSGVLDADKQLISELNAKQAAELIEQGV----------------- 205 (252)
T ss_pred CEECCCCCEeeecHHHHHHHHHHHcCCC-EEEEeCCcccCCCCCcCccccCHHHHHHHHhcCC-----------------
Confidence 9999999999999999999999999999 78999999985 5789999999999888864321
Q ss_pred ccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccCcHHHHHHHHHHHHcCCCe
Q 007903 338 ITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQR 417 (585)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~~kl~aa~~a~~~Gv~~ 417 (585)
+ +| | |.+|+++|..+++.|+.+
T Consensus 206 ------------~------------------------~g-G---------------------m~~kl~~a~~~~~~~~~~ 227 (252)
T cd04249 206 ------------I------------------------TD-G---------------------MIVKVNAALDAAQSLRRG 227 (252)
T ss_pred ------------C------------------------cC-C---------------------cHHHHHHHHHHHHhCCCe
Confidence 2 24 5 899999999999999888
Q ss_pred EEEecCccchhhHHHHHhcCCCceee
Q 007903 418 VHLLDGTIGGVLLLELFKRDGMGTMV 443 (585)
Q Consensus 418 v~I~~g~~~~~ll~el~~~~~~GT~i 443 (585)
+||++|+.++. |.++|++++.||+|
T Consensus 228 v~I~~g~~~~~-l~~~l~g~~~GT~I 252 (252)
T cd04249 228 IDIASWQYPEQ-LTALLAGEPVGTKI 252 (252)
T ss_pred EEEEeCCCccH-HHHHHcCCCCCcCC
Confidence 99999999986 78999999999986
|
There are two variants of this pathway. In one, typified by the pathway in Escherichia coli, glutamate is acetylated by acetyl-CoA and acetylornithine is deacylated hydrolytically. In this pathway, feedback inhibition by arginine occurs at the initial acetylation of glutamate and not at the phosphorylation of NAG by NAGK. Homodimeric NAGK-NC are members of the Amino Acid Kinase Superfamily (AAK). |
| >PRK12352 putative carbamate kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-40 Score=345.54 Aligned_cols=260 Identities=17% Similarity=0.218 Sum_probs=216.2
Q ss_pred CCeEEEEeCCccCCCC-----------ChHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHH
Q 007903 99 GGTFVVIISGEIVSSP-----------YLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSES 167 (585)
Q Consensus 99 ~k~iVIKlGGs~l~~~-----------~l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rvt~~~~ 167 (585)
.|+||||+||+++.++ ++..+++||++|+..|+++|||||+|||++.++++.+++++| +|+|+|+.+
T Consensus 2 ~k~iVI~lGGnAl~~~~~~~~~~~~~~~~~~~a~dia~l~~~G~~lVivHG~GPqI~~~l~~~~~~~~~-~g~rvt~~~- 79 (316)
T PRK12352 2 KELVVVAIGGNSIIKDNASQSIEHQAEAVKAVADTVLEMLASDYDIVLTHGNGPQVGLDLRRAEIAHER-EGLPLTPLA- 79 (316)
T ss_pred CcEEEEEEChHHhcCCCCCcchhhHHHHHHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHcCccccc-CCCCCCCHH-
Confidence 3799999999999763 258899999999999999999999999999999999999999 699999997
Q ss_pred HHHHHHHHhHHHHHHHHhhCCCCCchhHHhcCCCCc---ceeEEeeecCccee-eeeecccc-----------ccccCcc
Q 007903 168 LAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSR---WHEVGVSVASGNFL-AAKRKGVV-----------DGVDYGA 232 (585)
Q Consensus 168 l~~~~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~---~~av~l~~~dg~~~-~a~~~g~~-----------~g~d~g~ 232 (585)
+.+.++.|.+.++|.+.|++ .|.++|.... +.+++|++.|++|+ .+||.|++ +++||+|
T Consensus 80 -~~v~~~~g~i~~~i~~~L~~-----~l~~~g~~~~~~vvt~v~vs~~D~~f~~~~kpiG~~y~~~~a~~~~~~~~~~~~ 153 (316)
T PRK12352 80 -NCVADTQGGIGYLIQQALNN-----RLARHGEKKAVTVVTQVEVDKNDPGFAHPTKPIGAFFSESQRDELQKANPDWRF 153 (316)
T ss_pred -HHHHHHHHHHHHHHHHHHHH-----HHHhcCCCCeeEEEEEEEECCCCccccCCcccccCcccHHHHHHHhhhcCCceE
Confidence 44456777777777777753 6777773311 12588999999999 57888875 5678888
Q ss_pred eee--------------EEEecHHHHHHHHcCCCeEEEc-----CCccCCCCce----eeeChHHHHHHHHHHcCCCEEE
Q 007903 233 TGE--------------VKKVDVTRMRERLDGGCLVILS-----NLGYSSSGEV----LNCNTYEVATACALAIEADKLI 289 (585)
Q Consensus 233 ~G~--------------v~~v~~~~I~~lL~~G~IPVi~-----~v~~~~~G~~----~nid~D~lAa~lA~~L~AdkLI 289 (585)
++. |+.||.+.|+.||++|+|||++ |++.+.+|+. +|||+|.+|+.+|.+|+||+||
T Consensus 154 ~~d~g~G~rrvv~sp~pv~~V~~~~I~~ll~~g~iVi~~ggggiPv~~~~~g~~~n~~~nInaD~aAa~iA~aL~AdkLI 233 (316)
T PRK12352 154 VEDAGRGYRRVVASPEPKRIVEAPAIKALIQQGFVVIGAGGGGIPVVRTDAGDYQSVDAVIDKDLSTALLAREIHADILV 233 (316)
T ss_pred eecCCCCeEEecCCCCCceEEcHHHHHHHHHCCCEEEecCCCCCCEEeCCCCCccCceeeecHHHHHHHHHHHhCCCEEE
Confidence 555 9999999999999999997777 8877766654 5699999999999999999999
Q ss_pred EeecccccC-----CCCcccccccHHHHHHHHHhhchhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchh
Q 007903 290 CIIDGPILD-----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRI 364 (585)
Q Consensus 290 ilTDV~gl~-----~~~~lI~~it~~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (585)
|||||+|+. +++++|++++.+|+++++.++.
T Consensus 234 ~LTDV~GV~~d~~~~~~~li~~lt~~e~~~li~~g~-------------------------------------------- 269 (316)
T PRK12352 234 ITTGVEKVCIHFGKPQQQALDRVDIATMTRYMQEGH-------------------------------------------- 269 (316)
T ss_pred EEeCchhhccCCCCCCcccccccCHHHHHHHHhcCC--------------------------------------------
Confidence 999999984 3578999999999999986532
Q ss_pred ccccCCccccCCCCCcccccccccccccccccccCcHHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeec
Q 007903 365 ATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (585)
Q Consensus 365 ~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~ 444 (585)
+..| | |.+||++|+.|++.|+.++||++ ++. +.++|+++ .||+|.
T Consensus 270 --------i~~G-g---------------------M~pKl~aA~~al~~Gv~~v~I~~---~~~-i~~al~g~-~GT~I~ 314 (316)
T PRK12352 270 --------FPPG-S---------------------MLPKIIASLTFLEQGGKEVIITT---PEC-LPAALRGE-TGTHII 314 (316)
T ss_pred --------cCCC-C---------------------CHHHHHHHHHHHHhCCCeEEEcc---hHH-HHHHHcCC-CCeEEE
Confidence 1124 4 89999999999999999999997 444 67888766 899986
Q ss_pred c
Q 007903 445 S 445 (585)
Q Consensus 445 ~ 445 (585)
.
T Consensus 315 ~ 315 (316)
T PRK12352 315 K 315 (316)
T ss_pred e
Confidence 4
|
|
| >TIGR00761 argB acetylglutamate kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=318.72 Aligned_cols=201 Identities=32% Similarity=0.503 Sum_probs=183.5
Q ss_pred eEEEEeCCccCCCCChHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHH-HHHHhHHH
Q 007903 101 TFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAAGGIR 179 (585)
Q Consensus 101 ~iVIKlGGs~l~~~~l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~-~~~~G~i~ 179 (585)
++|||+||++++++ +.+++++|+.|+..|.++|||||||++++.++++++++.++.+|.|+|++++++.+ ++.+|++|
T Consensus 1 ~~ViK~GGs~l~~~-~~~~~~~i~~l~~~g~~~VlVhggg~~~~~~~~~~~~~~~~~~g~r~t~~~~~~~~~~~~~g~~~ 79 (231)
T TIGR00761 1 TIVIKIGGAAISDL-LEAFASDIAFLRAVGIKPVIVHGGGPEINELLEALGIPPEFKNGLRVTDKETLEVVEMVLIGQVN 79 (231)
T ss_pred CEEEEEChHHHhcc-HHHHHHHHHHHHHcCCCEEEEcCCcHHHHHHHHHcCCCCEecCCCccCCHHHHHHHHHHHhcchH
Confidence 68999999999987 99999999999999999999999999999999999999999999999999999987 45577999
Q ss_pred HHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHHcCCCeEEEcCC
Q 007903 180 MMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL 259 (585)
Q Consensus 180 ~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL~~G~IPVi~~v 259 (585)
..+++. |+++|++ ++++++.|++++++++. ++.|++++|+++.++.+.|+++|+.|+|||++|+
T Consensus 80 ~~i~~~---------L~~~G~~----a~~l~~~~~~~it~~~~---~~~~~~~~g~i~~i~~~~i~~~l~~g~IPVi~~~ 143 (231)
T TIGR00761 80 KELVAL---------LNKHGIN----AIGLTGGDGQLFTARSL---DKEDLGYVGEIKKVNKALLEALLKAGYIPVISSL 143 (231)
T ss_pred HHHHHH---------HHhCCCC----cccccCCCCCEEEEEEC---CCccCCcccceEEEcHHHHHHHHHCCCeEEECCC
Confidence 999885 4778987 79999999999999864 4568999999999999999999999999999999
Q ss_pred ccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC-CC-CcccccccHHHHHHHHHh
Q 007903 260 GYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-ES-GHLIRFLTLQEADSLIRQ 318 (585)
Q Consensus 260 ~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~-~~-~~lI~~it~~e~~~li~~ 318 (585)
+++.+|+++|+|+|.+|++||.+|+||+|+|+||+||++ .+ +++|++++.+|+++++..
T Consensus 144 ~~~~~g~~~~l~sD~~A~~lA~~l~A~~li~ltdv~Gv~~~d~~~~i~~i~~~e~~~l~~~ 204 (231)
T TIGR00761 144 ALTAEGQALNVNADTAAGALAAALGAEKLVLLTDVPGILNGDGQSLISEIPLEEIEQLIEQ 204 (231)
T ss_pred ccCCCCcEEEeCHHHHHHHHHHHcCCCEEEEEECCCCeecCCCCeeccccCHHHHHHHHHc
Confidence 999999999999999999999999999999999999984 33 459999999998888643
|
This model describes N-acetylglutamate kinases (ArgB) of many prokaryotes and the N-acetylglutamate kinase domains of multifunctional proteins from yeasts. This enzyme is the second step in the "acetylated" ornithine biosynthesis pathway. A related group of enzymes representing the first step of the pathway contain a homologous domain and are excluded from this model. |
| >cd04241 AAK_FomA-like AAK_FomA-like: This CD includes a fosfomycin biosynthetic gene product, FomA, and similar proteins found in a wide range of organisms | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=294.53 Aligned_cols=238 Identities=18% Similarity=0.234 Sum_probs=198.0
Q ss_pred eEEEEeCCccCCCCC---------hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHH
Q 007903 101 TFVVIISGEIVSSPY---------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA 171 (585)
Q Consensus 101 ~iVIKlGGs~l~~~~---------l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~ 171 (585)
++|||+||++|++++ +++++++|+.++ |+++|||||||++++..++++|+++ |.|+++++.|..+
T Consensus 1 ~iVIKiGGs~l~~~~~~~~~~~~~l~~l~~~l~~l~--g~~vvlVhGgg~~~~~~~~~~g~~~----g~~~~~~~~l~~~ 74 (252)
T cd04241 1 MIILKLGGSVITDKDRPETIREENLERIARELAEAI--DEKLVLVHGGGSFGHPKAKEYGLPD----GDGSFSAEGVAET 74 (252)
T ss_pred CEEEEEeceEEEcCCCCCccCHHHHHHHHHHHHhcc--CCCEEEEECCCcccCHHHHHhCCCc----CCCchhhhhHHHH
Confidence 489999999998753 456677777665 9999999999999999999999976 7789999999998
Q ss_pred HHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHHcCC
Q 007903 172 MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGG 251 (585)
Q Consensus 172 ~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL~~G 251 (585)
..+++++|..++++ |.++|++ ++++++.+. +.+. +|+++.++.+.|+++|+.|
T Consensus 75 ~~~~~~ln~~~~~~---------l~~~g~~----a~~l~~~~~--~~~~------------~g~~~~~~~~~l~~ll~~g 127 (252)
T cd04241 75 HEAMLELNSIVVDA---------LLEAGVP----AVSVPPSSF--FVTE------------NGRIVSFDLEVIKELLDRG 127 (252)
T ss_pred HHHHHHHHHHHHHH---------HHHCCCC----eEEEChHHe--EEec------------CCeeeeecHHHHHHHHhCC
Confidence 77778999888875 4778987 677777663 2221 4788899999999999999
Q ss_pred CeEEEcCC-ccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC-C---CCcccccccHHHHHHHHHhhchhhhHH
Q 007903 252 CLVILSNL-GYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-E---SGHLIRFLTLQEADSLIRQRVKQSEIA 326 (585)
Q Consensus 252 ~IPVi~~v-~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~-~---~~~lI~~it~~e~~~li~~~~~~~~~~ 326 (585)
+|||+++. +.+.+|+.+|+|+|++|+.+|.+|+||+|+|+|||||++ . ++++|++++.+++++++....
T Consensus 128 ~iPVi~~~~~~~~~~~~~~~~~D~~A~~lA~~l~A~~li~ltdv~Gv~~~~P~~~~~i~~i~~~~~~~~~~~~~------ 201 (252)
T cd04241 128 FVPVLHGDVVLDEGGGITILSGDDIVVELAKALKPERVIFLTDVDGVYDKPPPDAKLIPEIDVGSLEDILAALG------ 201 (252)
T ss_pred CEEEEcCCeEecCCCCeEEeChHHHHHHHHHHcCCCEEEEEeCCCeeECCCCCCCeEcceeCccchHHHHHhcC------
Confidence 99999874 577788899999999999999999999999999999984 2 599999999988888764200
Q ss_pred HHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccCcHHHHHH
Q 007903 327 ANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAA 406 (585)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~~kl~a 406 (585)
.++...+| | |.+||++
T Consensus 202 ------------------------------------------~~~~~~tG-G---------------------m~~Kl~a 217 (252)
T cd04241 202 ------------------------------------------SAGTDVTG-G---------------------MAGKIEE 217 (252)
T ss_pred ------------------------------------------cCCccccC-C---------------------HHHHHHH
Confidence 00111235 5 9999999
Q ss_pred HHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceee
Q 007903 407 AAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 443 (585)
Q Consensus 407 a~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i 443 (585)
|..+++.|++ +||+||+.++. |.++++++..||+|
T Consensus 218 a~~a~~~Gv~-v~I~~g~~~~~-l~~~l~g~~~GT~i 252 (252)
T cd04241 218 LLELARRGIE-VYIFNGDKPEN-LYRALLGNFIGTRI 252 (252)
T ss_pred HHHHHhcCCe-EEEEeCCCHHH-HHHHHcCCCCceEC
Confidence 9999999998 99999999987 67888888899985
|
Together, the fomA and fomB genes in the fosfomycin biosynthetic gene cluster of Streptomyces wedmorensis confer high-level fosfomycin resistance. FomA and FomB proteins converted fosfomycin to fosfomycin monophosphate and fosfomycin diphosphate in the presence of ATP and a magnesium ion, indicating that FomA and FomB catalyzed phosphorylations of fosfomycin and fosfomycin monophosphate, respectively. FomA and related sequences in this CD are members of the Amino Acid Kinase Superfamily (AAK). |
| >PRK12686 carbamate kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-32 Score=281.53 Aligned_cols=255 Identities=18% Similarity=0.209 Sum_probs=197.1
Q ss_pred CCeEEEEeCCccCCCCC---------hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHH-HcCCcccccCCccCCCHHHH
Q 007903 99 GGTFVVIISGEIVSSPY---------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLS-ERGHEAKYLGRYRITDSESL 168 (585)
Q Consensus 99 ~k~iVIKlGGs~l~~~~---------l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~-~~g~~~~~~~g~rvt~~~~l 168 (585)
++++|||+|||+|.++. .+..+++|+.|.+.|+++|||||+|||++.++. ..+....+ .++.+|
T Consensus 2 ~~~iVialGGnAl~~~~~~~~~q~~~~~~~a~~ia~l~~~g~~~vi~HGnGPQVg~~~~~~~~~~~~~------~~~~pl 75 (312)
T PRK12686 2 KEKIVIALGGNAILQTEATAEAQQTAVREAAQHLVDLIEAGHDIVITHGNGPQVGNLLLQQAESNSNK------VPAMPL 75 (312)
T ss_pred CCEEEEEcChHhhCCCCCChHHHHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHhccccC------CCCCCh
Confidence 57999999999998744 478999999999999999999999999995544 44444322 456678
Q ss_pred HHH-HHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcce----eEEeeecCcceee-eeecccc------------c----
Q 007903 169 AAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWH----EVGVSVASGNFLA-AKRKGVV------------D---- 226 (585)
Q Consensus 169 ~~~-~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~----av~l~~~dg~~~~-a~~~g~~------------~---- 226 (585)
+++ .++.|.+.++|+++|.+ +|.++++..++. ++.++..|..|.. .|+.|+. .
T Consensus 76 ~~~~a~sqg~iGy~~~q~l~~-----~l~~r~~~~~v~~vvtqv~Vd~~d~af~~ptk~ig~~~~~~~a~~~~~~~g~~~ 150 (312)
T PRK12686 76 DTCVAMSQGMIGYWLQNALNN-----ELTERGIDKPVITLVTQVEVDKDDPAFANPTKPIGPFYTEEEAKQQAEQPGSTF 150 (312)
T ss_pred hhhhhhccchhhHHHHHHHHH-----HHHhcCCCCCceEEEEEEEECCCChhhcCCCCCccCccCHHHHHHHHHHcCCcc
Confidence 886 67999999999999975 888888876553 3457777776666 3555531 0
Q ss_pred ccc--CcceeeEEE------ecHHHHHHHHcCCCeEEEc-----CCccCCCCcee----eeChHHHHHHHHHHcCCCEEE
Q 007903 227 GVD--YGATGEVKK------VDVTRMRERLDGGCLVILS-----NLGYSSSGEVL----NCNTYEVATACALAIEADKLI 289 (585)
Q Consensus 227 g~d--~g~~G~v~~------v~~~~I~~lL~~G~IPVi~-----~v~~~~~G~~~----nid~D~lAa~lA~~L~AdkLI 289 (585)
..| .||++.|.+ ++.+.|+.||++|+|||++ |+..+ ++.++ ++|+|.+|+.||.+|+||+||
T Consensus 151 ~~d~~~G~rrvV~sP~P~~ive~~~I~~Ll~~G~IpI~~GgggIPVv~~-~~~~~gv~avid~D~~Aa~LA~~L~Ad~LI 229 (312)
T PRK12686 151 KEDAGRGYRRVVPSPKPQEIIEHDTIRTLVDGGNIVIACGGGGIPVIRD-DNTLKGVEAVIDKDFASEKLAEQIDADLLI 229 (312)
T ss_pred cccCCCCeEEeeCCCCCccccCHHHHHHHHHCCCEEEEeCCCCCCeEec-CCcEEeeecccCccHHHHHHHHHcCCCEEE
Confidence 123 489998877 9999999999999999876 44433 34333 679999999999999999999
Q ss_pred EeecccccC-----CCCcccccccHHHHHHHHHhhchhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchh
Q 007903 290 CIIDGPILD-----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRI 364 (585)
Q Consensus 290 ilTDV~gl~-----~~~~lI~~it~~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (585)
|||||+|++ +++++|++++.+|++.++.++.
T Consensus 230 iLTDVdGVy~~~~~p~ak~I~~I~~~e~~~li~~g~-------------------------------------------- 265 (312)
T PRK12686 230 ILTGVENVFINFNKPNQQKLDDITVAEAKQYIAEGQ-------------------------------------------- 265 (312)
T ss_pred EEeCchhhccCCCCCCCeECCccCHHHHHHHhhCCC--------------------------------------------
Confidence 999999984 4689999999999888875421
Q ss_pred ccccCCccccCCCCCcccccccccccccccccccCcHHHHHHHHHHHHcCC-CeEEEecCccchhhHHHHHhcCCCceee
Q 007903 365 ATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGV-QRVHLLDGTIGGVLLLELFKRDGMGTMV 443 (585)
Q Consensus 365 ~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~~kl~aa~~a~~~Gv-~~v~I~~g~~~~~ll~el~~~~~~GT~i 443 (585)
|.+| | |.+|++||..+++.|+ .+++|++ ++. +.+++.++ .||.|
T Consensus 266 --------~~tG-G---------------------M~pKveAA~~av~~g~g~~viI~~---~~~-i~~aL~G~-~GT~I 310 (312)
T PRK12686 266 --------FAPG-S---------------------MLPKVEAAIDFVESGEGKKAIITS---LEQ-AKEALAGN-AGTHI 310 (312)
T ss_pred --------ccCC-C---------------------cHHHHHHHHHHHHhCCCCEEEEeC---chH-HHHHhCCC-CCeEE
Confidence 2345 5 8999999999998764 4577776 333 45666554 89998
Q ss_pred c
Q 007903 444 A 444 (585)
Q Consensus 444 ~ 444 (585)
.
T Consensus 311 ~ 311 (312)
T PRK12686 311 T 311 (312)
T ss_pred e
Confidence 4
|
|
| >PRK12353 putative amino acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-32 Score=281.65 Aligned_cols=262 Identities=18% Similarity=0.226 Sum_probs=195.6
Q ss_pred cCCeEEEEeCCccCCCCC---------hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHH
Q 007903 98 RGGTFVVIISGEIVSSPY---------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESL 168 (585)
Q Consensus 98 r~k~iVIKlGGs~l~~~~---------l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rvt~~~~l 168 (585)
++++|||||||++|++++ +..++++|+.|++.|+++|||||||+|++..+...+..+++.. ++++....
T Consensus 1 ~~~~iVIklGG~~L~~~~~~~~~~~~~i~~la~~Ia~l~~~G~~vvlV~Gg~~~~G~~~~~~~~~~~~~~--~~~~~~~~ 78 (314)
T PRK12353 1 MMKKIVVALGGNALGSTPEEATAQLEAVKKTAKSLVDLIEEGHEVVITHGNGPQVGNILLAQEAAASEKN--KVPAMPLD 78 (314)
T ss_pred CCcEEEEEECHHHhCCCCCCCcccHHHHHHHHHHHHHHHHCCCEEEEEeCCchHhCHHHhcCccccccCC--CCCCchhH
Confidence 468999999999999865 6899999999999999999999999999887666555443322 55665444
Q ss_pred HHHHHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcc----eeEEeeecCcce-eeeeecccc------------ccccCc
Q 007903 169 AAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRW----HEVGVSVASGNF-LAAKRKGVV------------DGVDYG 231 (585)
Q Consensus 169 ~~~~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~----~av~l~~~dg~~-~~a~~~g~~------------~g~d~g 231 (585)
..+...+|.+.+.|++.|++ .|..+|+..+. .++-++..|..| ..++|.|++ +|.||.
T Consensus 79 ~~~a~~qg~l~~~l~~~~~~-----~l~~~~~~~~~~~~v~q~ll~~~d~~f~~~~~p~g~~~~~~~~~~~~~~~g~~~~ 153 (314)
T PRK12353 79 VCGAMSQGYIGYHLQNALRN-----ELLKRGIDKPVATVVTQVVVDANDPAFKNPTKPIGPFYTEEEAEKLAKEKGYTFK 153 (314)
T ss_pred HHHHHHhHHHHHHHHHHHHH-----HHHhcCCCcccceEEEEEEEcCCcccccCCCccccccccHHHHHHhhhhcCceee
Confidence 44466788888888888864 78888875433 234456666556 556777765 456665
Q ss_pred c-eee-EEE----------ecHHHHHHHHcCCCeEEEcCCc----cCCCCcee----eeChHHHHHHHHHHcCCCEEEEe
Q 007903 232 A-TGE-VKK----------VDVTRMRERLDGGCLVILSNLG----YSSSGEVL----NCNTYEVATACALAIEADKLICI 291 (585)
Q Consensus 232 ~-~G~-v~~----------v~~~~I~~lL~~G~IPVi~~v~----~~~~G~~~----nid~D~lAa~lA~~L~AdkLIil 291 (585)
+ +++ .++ ++.+.|+.||+.|+|||+++.+ ..+++.++ ++|+|++|+++|.+|+||+||++
T Consensus 154 ~~~~~~~r~~v~sp~p~~~v~~~~i~~lL~~g~IpV~~g~gg~Pi~~~~~~~~~~~~~~d~D~lAa~lA~~l~Ad~Li~l 233 (314)
T PRK12353 154 EDAGRGYRRVVPSPKPVDIVEIEAIKTLVDAGQVVIAAGGGGIPVIREGGGLKGVEAVIDKDFASAKLAELVDADLLIIL 233 (314)
T ss_pred ecCCceeEeccCCCCccccccHHHHHHHHHCCCEEEEcCCCCCCEEEeCCceeeeeEecCHHHHHHHHHHHhCCCEEEEE
Confidence 5 332 333 7899999999999999999653 22233333 59999999999999999999999
Q ss_pred ecccccC-----CCCcccccccHHHHHHHHHhhchhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhcc
Q 007903 292 IDGPILD-----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIAT 366 (585)
Q Consensus 292 TDV~gl~-----~~~~lI~~it~~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (585)
|||||++ +++++|++++.+|+++++..+.
T Consensus 234 TdvdGVy~~~~~~~a~~i~~i~~~e~~~~~~~~~---------------------------------------------- 267 (314)
T PRK12353 234 TAVDKVYINFGKPNQKKLDEVTVSEAEKYIEEGQ---------------------------------------------- 267 (314)
T ss_pred eCCccccCCCCCCCCeECcCcCHHHHHHHHhcCC----------------------------------------------
Confidence 9999984 3589999999888877764311
Q ss_pred ccCCccccCCCCCcccccccccccccccccccCcHHHHHHHHHHH-HcCCCeEEEecCccchhhHHHHHhcCCCceeecc
Q 007903 367 FNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVC-RRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (585)
Q Consensus 367 ~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~~kl~aa~~a~-~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~~ 445 (585)
+++| | |.+||++|..++ +.+...++|++ ++. +.+++.++ .||.|.+
T Consensus 268 ------~~tG-G---------------------M~~Kl~aA~~a~~~~~g~~v~I~~---~~~-i~~~l~g~-~GT~i~~ 314 (314)
T PRK12353 268 ------FAPG-S---------------------MLPKVEAAISFVESRPGRKAIITS---LEK-AKEALEGK-AGTVIVK 314 (314)
T ss_pred ------cCCC-C---------------------cHHHHHHHHHHHHHcCCCEEEECC---chH-HHHHhCCC-CCeEecC
Confidence 1235 5 899999999999 44444589998 444 45666665 8999853
|
|
| >PRK12454 carbamate kinase-like carbamoyl phosphate synthetase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-32 Score=277.58 Aligned_cols=258 Identities=21% Similarity=0.234 Sum_probs=200.7
Q ss_pred CCeEEEEeCCccCCCCC-----------hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHH
Q 007903 99 GGTFVVIISGEIVSSPY-----------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSES 167 (585)
Q Consensus 99 ~k~iVIKlGGs~l~~~~-----------l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rvt~~~~ 167 (585)
++++||+|||++|..+. ++..+++|+.|.+.|+++|||||+|||++.++......... + +++.+
T Consensus 2 ~~~ivvalgGnAl~~~~~~~~~~~q~~~v~~~a~~i~~~~~~g~~vvi~hGnGpQVG~i~~~~~~~~~~--~---~~~~p 76 (313)
T PRK12454 2 KKRIVIALGGNALLQPGEKGTAENQMKNVRKTAKQIADLIEEGYEVVITHGNGPQVGNLLLQMDAAKDV--G---IPPFP 76 (313)
T ss_pred CceEEEEeChHHhCCCCCCCcchHHHHHHHHHHHHHHHHHHcCCEEEEEECCChHHHHHHHHHHHhccc--C---CCCCc
Confidence 47999999999997622 57889999999999999999999999999887665433210 0 34556
Q ss_pred HHHH-HHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcce----eEEeeecCcceee-eeecccc-c--------------
Q 007903 168 LAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWH----EVGVSVASGNFLA-AKRKGVV-D-------------- 226 (585)
Q Consensus 168 l~~~-~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~----av~l~~~dg~~~~-a~~~g~~-~-------------- 226 (585)
|+.+ .+++|.+.++|+++|++ +|.++|++.++. ++.++..|..|-. .||.|+. +
T Consensus 77 ld~~~a~sqG~igy~l~~al~~-----~l~~~g~~~~v~t~~tq~~Vd~~Dpaf~~PtKpiG~~y~~~~a~~~~~~~g~~ 151 (313)
T PRK12454 77 LDVAGAMTQGWIGYMIQQALRN-----ELAKRGIEKQVATIVTQVIVDKNDPAFQNPTKPVGPFYDEEEAKKLAKEKGWI 151 (313)
T ss_pred cchhhhhhhHHHHHHHHHHHHH-----HHHhcCCCCceEEEEEEEEECCCCccccCCCCCcCCCcCHHHHHHHHHHcCCE
Confidence 7776 67999999999999975 899999987664 4567777777766 3666632 1
Q ss_pred ---cccCcceee------EEEecHHHHHHHHcCCCeEEEcCCc----cCCCCceee----eChHHHHHHHHHHcCCCEEE
Q 007903 227 ---GVDYGATGE------VKKVDVTRMRERLDGGCLVILSNLG----YSSSGEVLN----CNTYEVATACALAIEADKLI 289 (585)
Q Consensus 227 ---g~d~g~~G~------v~~v~~~~I~~lL~~G~IPVi~~v~----~~~~G~~~n----id~D~lAa~lA~~L~AdkLI 289 (585)
....||.-. ++.++.+.|+.||++|.|||+++.+ ++.+|+++| +|+|.+|+.||.+|+||+||
T Consensus 152 ~~~d~g~g~RrvV~SP~P~~ive~~aI~~LLe~G~IvI~~GgGGiPV~~~~g~~~gveaViD~D~aAa~LA~~L~AD~LI 231 (313)
T PRK12454 152 VKEDAGRGWRRVVPSPDPLGIVEIEVIKALVENGFIVIASGGGGIPVIEEDGELKGVEAVIDKDLASELLAEELNADIFI 231 (313)
T ss_pred EEEcCCCceEEEeCCCCCccccCHHHHHHHHHCCCEEEEeCCCccceEcCCCcEEeeeeecCccHHHHHHHHHcCCCEEE
Confidence 012334432 3688999999999999999999543 677777776 47899999999999999999
Q ss_pred EeecccccC-----CCCcccccccHHHHHHHHHhhchhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchh
Q 007903 290 CIIDGPILD-----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRI 364 (585)
Q Consensus 290 ilTDV~gl~-----~~~~lI~~it~~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (585)
|||||+|++ +++++|++++.+|+++++.++.
T Consensus 232 iLTdVdGVy~~~~~p~~~~i~~It~~e~~~~i~~g~-------------------------------------------- 267 (313)
T PRK12454 232 ILTDVEKVYLNYGKPDQKPLDKVTVEEAKKYYEEGH-------------------------------------------- 267 (313)
T ss_pred EEeCCceeeCCCCCCCCeEccccCHHHHHHHHhcCC--------------------------------------------
Confidence 999999983 5689999999999988875421
Q ss_pred ccccCCccccCCCCCcccccccccccccccccccCcHHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeec
Q 007903 365 ATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (585)
Q Consensus 365 ~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~ 444 (585)
|.+| | |.+||+||+.+++.|+.+++|.+. +. +.+++.++ .||.|.
T Consensus 268 --------~~~G-g---------------------M~pKv~AA~~~v~~gg~~a~I~~~---~~-i~~aL~G~-~GT~I~ 312 (313)
T PRK12454 268 --------FKAG-S---------------------MGPKILAAIRFVENGGKRAIIASL---EK-AVEALEGK-TGTRII 312 (313)
T ss_pred --------cCCC-C---------------------hHHHHHHHHHHHHcCCCeEEECch---HH-HHHHHCCC-CCeEeC
Confidence 2245 5 999999999999999999999963 33 56666555 899985
Q ss_pred c
Q 007903 445 S 445 (585)
Q Consensus 445 ~ 445 (585)
+
T Consensus 313 ~ 313 (313)
T PRK12454 313 P 313 (313)
T ss_pred C
Confidence 3
|
|
| >cd02115 AAK Amino Acid Kinases (AAK) superfamily, catalytic domain; present in such enzymes like N-acetylglutamate kinase (NAGK), carbamate kinase (CK), aspartokinase (AK), glutamate-5-kinase (G5K) and UMP kinase (UMPK) | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.8e-32 Score=272.37 Aligned_cols=237 Identities=30% Similarity=0.396 Sum_probs=204.8
Q ss_pred EEEeCCccCCCCC-hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHHHHHHhHHHHH
Q 007903 103 VVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMM 181 (585)
Q Consensus 103 VIKlGGs~l~~~~-l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~~~~~G~i~~~ 181 (585)
||||||++++++. ++.++++|+.|++.|+++|||||||++++..+.+++....+..+.++++.+.+.++....+..+..
T Consensus 1 ViKiGGs~l~~~~~~~~~~~~i~~l~~~~~~~viV~ggg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (248)
T cd02115 1 VIKFGGSSVSSEERLRNLARILVKLASEGGRVVVVHGAGPQITDELLAHGELLGYARGLRITDRETDALAAMGEGMSNLL 80 (248)
T ss_pred CEeeCccccCCHHHHHHHHHHHHHHHhcCCCEEEEECCCCCcCHHHHHHHHhhhhhhccCCCHHHHHHHHHHHHHHHHHH
Confidence 7999999998854 899999999999899999999999999999999998887777888999998888776666777777
Q ss_pred HHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHHcCCCeEEEcCCcc
Q 007903 182 IEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGY 261 (585)
Q Consensus 182 L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL~~G~IPVi~~v~~ 261 (585)
+++. |.++|++ +..+.+.+..+.. .+++++|++..++.+.|+++|+.|.|||+++.+.
T Consensus 81 ~~~~---------l~~~gi~----a~~~~~~~~~~~~---------~~~~~~g~~~~~~~~~l~~~l~~~~ipVv~g~~~ 138 (248)
T cd02115 81 IAAA---------LEQHGIK----AVPLDLTQAGFAS---------PNQGHVGKITKVSTDRLKSLLENGILPILSGFGG 138 (248)
T ss_pred HHHH---------HHhCCCC----eEEEchHHcCeEe---------CCCCCcccceeeCHHHHHHHHhCCcEEEecCeEe
Confidence 7775 5788987 6777777654443 2578889999999999999999999999999865
Q ss_pred CC---CCceeeeChHHHHHHHHHHcCCCEEEEeecccccC-------CCCcccccccHHHHHHHHHhhchhhhHHHHHHh
Q 007903 262 SS---SGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVK 331 (585)
Q Consensus 262 ~~---~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~-------~~~~lI~~it~~e~~~li~~~~~~~~~~~~~~~ 331 (585)
.. .+++.++++|.+|+.||.+|+||+|+|+|||||++ +++++|++++.+|++++...
T Consensus 139 ~~~~~~~~~~~~~sD~~A~~lA~~l~A~~li~~tdV~Gv~~~dP~~~~~a~~i~~i~~~e~~~l~~~------------- 205 (248)
T cd02115 139 TDEKETGTLGRGGSDSTAALLAAALKADRLVILTDVDGVYTADPRKVPDAKLLSELTYEEAAELAYA------------- 205 (248)
T ss_pred ccCCceeeecCCCHHHHHHHHHHHcCCCEEEEEecCCeeecCCCCcCCcCeECCcCCHHHHHHHHHc-------------
Confidence 54 67889999999999999999999999999999983 24999999999888887532
Q ss_pred hhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccCcHHHHHHHHHHH
Q 007903 332 AVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVC 411 (585)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~~kl~aa~~a~ 411 (585)
| + |..|++++..++
T Consensus 206 --------------------------------------------g-~---------------------~~~k~~a~~~~~ 219 (248)
T cd02115 206 --------------------------------------------G-A---------------------MVLKPKAADPAA 219 (248)
T ss_pred --------------------------------------------C-C---------------------CccCHHHHHHHH
Confidence 3 3 788999999999
Q ss_pred HcCCCeEEEecCccchhhHHHHHhcCCCceee
Q 007903 412 RRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 443 (585)
Q Consensus 412 ~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i 443 (585)
+.|+ +++|+++..++.| ++|++++.||+|
T Consensus 220 ~~~~-~v~I~~~~~~~~l--~~~~~~~~GT~I 248 (248)
T cd02115 220 RAGI-PVRIANTENPGAL--ALFTPDGGGTLI 248 (248)
T ss_pred HcCC-cEEEEeCCCcccc--cccCCCCCCCCC
Confidence 9996 4999999999985 999999999986
|
The AAK superfamily includes kinases that phosphorylate a variety of amino acid substrates. These kinases catalyze the formation of phosphoric anhydrides, generally with a carboxylate, and use ATP as the source of the phosphoryl group; are involved in amino acid biosynthesis. Some of these kinases control the process via allosteric feed-back inhibition. |
| >COG0263 ProB Glutamate 5-kinase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.9e-31 Score=268.12 Aligned_cols=296 Identities=19% Similarity=0.245 Sum_probs=213.8
Q ss_pred CCeEEEEeCCccCCCCC-------hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHH
Q 007903 99 GGTFVVIISGEIVSSPY-------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA 171 (585)
Q Consensus 99 ~k~iVIKlGGs~l~~~~-------l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~ 171 (585)
.+++|||+|+|+|+++. ++.++++|+.|++.|++||||++|. +...+..+|++.+ .++....+ +
T Consensus 6 ~~riVvKiGSs~Lt~~~g~l~~~~l~~l~~~ia~L~~~G~eVilVSSGA--iaaG~~~Lg~~~r------p~~l~~kQ-A 76 (369)
T COG0263 6 ARRIVVKIGSSSLTDGTGGLDRSKLEELVRQVAALHKAGHEVVLVSSGA--IAAGRTRLGLPKR------PKTLAEKQ-A 76 (369)
T ss_pred ceEEEEEECcceeeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEccch--hhhChhhcCCCCC------CcchHHHH-H
Confidence 38999999999999864 7899999999999999999999995 6667889998863 34333333 4
Q ss_pred HHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEec-HHHHHHHHcC
Q 007903 172 MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVD-VTRMRERLDG 250 (585)
Q Consensus 172 ~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~-~~~I~~lL~~ 250 (585)
.+++||.. |++.|++ .|.+||++ +.++-|+-.| +. -+.+..| .++|..||+.
T Consensus 77 ~AAVGQ~~--Lm~~y~~-----~f~~~g~~--v~QiLLTr~D---~~---------------~r~ry~Nar~Tl~~Ll~~ 129 (369)
T COG0263 77 AAAVGQVR--LMQLYEE-----LFARYGIK--VGQILLTRDD---FS---------------DRRRYLNARNTLSALLEL 129 (369)
T ss_pred HHHhCHHH--HHHHHHH-----HHHhcCCe--eeEEEeehhh---hh---------------hHHHHHHHHHHHHHHHHC
Confidence 56899987 8999975 89999987 4556555554 11 1113456 4999999999
Q ss_pred CCeEEEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeeccccc-------CCCCcccccccHHHHHHHHHhhchhh
Q 007903 251 GCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPIL-------DESGHLIRFLTLQEADSLIRQRVKQS 323 (585)
Q Consensus 251 G~IPVi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl-------~~~~~lI~~it~~e~~~li~~~~~~~ 323 (585)
|.|||||....-..-|+.+.|||++|+.+|..++||.|++|||+||+ +||+++|++++. +...+.
T Consensus 130 gvVPIINENDtva~~EikfGDND~LsA~VA~lv~ADlLvlLsDiDGLyd~nPr~~pdAk~i~~V~~--it~ei~------ 201 (369)
T COG0263 130 GVVPIINENDTVATEEIKFGDNDTLSALVAILVGADLLVLLSDIDGLYDANPRTNPDAKLIPEVEE--ITPEIE------ 201 (369)
T ss_pred CceeeecCCCceeeeeeeecCCchHHHHHHHHhCCCEEEEEEccCcccCCCCCCCCCCeeehhhcc--cCHHHH------
Confidence 99999996432223389999999999999999999999999999998 257888888763 111111
Q ss_pred hHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccCcHHH
Q 007903 324 EIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSE 403 (585)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~~k 403 (585)
++++ +.|+.+||| | |.+|
T Consensus 202 --------~~ag--------------------------------gsgs~~GTG-G---------------------M~TK 219 (369)
T COG0263 202 --------AMAG--------------------------------GSGSELGTG-G---------------------MRTK 219 (369)
T ss_pred --------HHhc--------------------------------CCCCCCCcc-c---------------------HHHH
Confidence 1221 256678888 7 8999
Q ss_pred HHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeeccccc--ccccccc-----------ccCHHHHHHHHHHHH
Q 007903 404 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLY--EGTRTAK-----------VTDLSGIKQIIQPLV 470 (585)
Q Consensus 404 l~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~~d~~--~~IR~at-----------~~D~~~I~~Li~~~~ 470 (585)
|+||..|+++|++ +.|.+|..++. +.++..++..||+|.+... ..-|+.+ .-|..+..++. .
T Consensus 220 l~AA~iA~~aG~~-~iI~~g~~~~~-i~~~~~~~~~GT~F~~~~~~~~~ark~Wi~~~~~~~G~i~iD~GA~~Al~---~ 294 (369)
T COG0263 220 LEAAKIATRAGVP-VIIASGSKPDV-ILDALEGEAVGTLFEPQAKERLNARKQWIAGALPPAGEITVDAGAVEALL---E 294 (369)
T ss_pred HHHHHHHHHcCCc-EEEecCCCcch-HHHHHhCCCCccEEecCCcchhhhhHHHhhcCCCCCceEEECccHHHHHH---h
Confidence 9999999999999 89999999997 6677789999999985432 1112211 23555555551 1
Q ss_pred HccccccCCHHHHHhcc---CeEEEEEECCeEEEEEEEe
Q 007903 471 ESGALVRRTDEELLKAL---DSFYVVEREGQIIACAALF 506 (585)
Q Consensus 471 ~~~~~~~~~~e~l~~~i---~~~~Va~~dg~IVG~~~l~ 506 (585)
....++|.....++..| +.+-+. .++..||.+...
T Consensus 295 ~gkSLLpaGV~~V~G~F~rGdvV~i~-~~g~~iarG~v~ 332 (369)
T COG0263 295 QGKSLLPAGVTSVEGNFSRGDVVRIR-PQGGEIARGLVN 332 (369)
T ss_pred cCCccccccceEeeeeecCCCEEEEe-cCCceeEeeecc
Confidence 12224454445555555 333333 566677777665
|
|
| >TIGR00746 arcC carbamate kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.1e-30 Score=264.85 Aligned_cols=255 Identities=19% Similarity=0.212 Sum_probs=187.5
Q ss_pred CeEEEEeCCccCCCC--C---------hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHH
Q 007903 100 GTFVVIISGEIVSSP--Y---------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESL 168 (585)
Q Consensus 100 k~iVIKlGGs~l~~~--~---------l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rvt~~~~l 168 (585)
|+||||+|||+|.++ . ++.++++|+.|.+.|+++|||||||||++.........+ ..+++..|
T Consensus 1 ~riViklGgnaL~~~g~~~~~~~~~~~i~~~a~~ia~l~~~g~~vviv~gngpqvG~~~l~~~~~~------~~~~~~p~ 74 (310)
T TIGR00746 1 KRVVVALGGNALLQRGEKGSAEAQRDNVRQTAPQIAKLIKRGYELVITHGNGPQVGNLLLQNQAAD------SEVPAMPL 74 (310)
T ss_pred CeEEEEECHHHhCCCCCCCCcchhHHHHHHHHHHHHHHHHCCCEEEEEECChHHHHHHHhcccccc------ccCCCCcc
Confidence 689999999999842 1 578999999999999999999999999997654332211 11334456
Q ss_pred HHH-HHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcc----eeEEeeecCcceeee-eecccc-----------------
Q 007903 169 AAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRW----HEVGVSVASGNFLAA-KRKGVV----------------- 225 (585)
Q Consensus 169 ~~~-~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~----~av~l~~~dg~~~~a-~~~g~~----------------- 225 (585)
+++ ...+|.+.+.+..+|++ .+.++|++.++ .++.|+..|..|-.. |+.|..
T Consensus 75 ~~~~A~~qg~lg~~~~~~l~~-----~l~~~g~~~~v~~~vtqv~v~~~D~af~~p~k~ig~~y~~~~a~~~~~~~~~~~ 149 (310)
T TIGR00746 75 DVLGAMSQGMIGYMLQQALNN-----ELPKRGMEKPVATVLTQTIVDPKDPAFQNPTKPIGPFYTEEEAKRLAAEKGWIV 149 (310)
T ss_pred hHHHHhhHHHHHHHHHHHHHH-----HHHhcCCCccceEEEEEEEECCCcccccCCCCcCCCCcCHHHHHHHHHHcCCeE
Confidence 765 56888899989888754 67788877654 356677777666543 332311
Q ss_pred -ccccCcceee------EEEecHHHHHHHHcCCCeEEEcCCc----cCCCCce----eeeChHHHHHHHHHHcCCCEEEE
Q 007903 226 -DGVDYGATGE------VKKVDVTRMRERLDGGCLVILSNLG----YSSSGEV----LNCNTYEVATACALAIEADKLIC 290 (585)
Q Consensus 226 -~g~d~g~~G~------v~~v~~~~I~~lL~~G~IPVi~~v~----~~~~G~~----~nid~D~lAa~lA~~L~AdkLIi 290 (585)
+...+||.-. ++.++.+.|+.||+.|.|+|.++-+ +.+++++ .|+|+|++|+.+|.+|+||+||+
T Consensus 150 ~~d~~~~~rrvv~sp~p~~iv~~~~I~~LL~~G~iVI~~ggggiPvi~e~~~~~g~e~~id~D~lAa~lA~~l~AD~LIi 229 (310)
T TIGR00746 150 KEDAGRGWRRVVPSPRPKDIVEAETIKTLVENGVIVISSGGGGVPVVLEGAELKGVEAVIDKDLASEKLAEEVNADILVI 229 (310)
T ss_pred eecCCCcceEeecCCCchhhccHHHHHHHHHCCCEEEeCCCCCcCEEecCCeEEeeEecCCHHHHHHHHHHHhCCCEEEE
Confidence 1112344432 2468899999999999865555322 2233433 48999999999999999999999
Q ss_pred eecccccC-----CCCcccccccHHHHHHHHHhhchhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhc
Q 007903 291 IIDGPILD-----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIA 365 (585)
Q Consensus 291 lTDV~gl~-----~~~~lI~~it~~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (585)
||||||++ +++++|++++.+|++.++.++
T Consensus 230 LTDVdGVy~~~~~p~a~~i~~it~~e~~~~~~~g---------------------------------------------- 263 (310)
T TIGR00746 230 LTDVDAVYINYGKPDEKALREVTVEELEDYYKAG---------------------------------------------- 263 (310)
T ss_pred EeCCCceeCCCCCCCCcCCcCcCHHHHHHHHhcC----------------------------------------------
Confidence 99999984 468999999998888876321
Q ss_pred cccCCccccCCCCCcccccccccccccccccccCcHHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeec
Q 007903 366 TFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (585)
Q Consensus 366 ~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~ 444 (585)
.|++| | |.+||+||..+++.|+.+++|++ ++. +.+++.++ .||+|.
T Consensus 264 ------~~~tG-g---------------------M~~Kl~AA~~~~~~g~~~v~I~~---~~~-i~~~l~G~-~GT~I~ 309 (310)
T TIGR00746 264 ------HFAAG-S---------------------MGPKVEAAIEFVESGGKRAIITS---LEN-AVEALEGK-AGTRVT 309 (310)
T ss_pred ------CcCCC-C---------------------cHHHHHHHHHHHHhCCCeEEEec---hHH-HHHHHCCC-CCcEEe
Confidence 13345 5 89999999999999988899998 344 66777777 899985
|
The seed alignment for this model includes experimentally confirmed examples from a set of phylogenetically distinct species. In a neighbor-joining tree constructed from an alignment of candidate carbamate kinases and several acetylglutamate kinases, the latter group forms a clear outgroup which roots the tree of carbamate kinase-like proteins. This analysis suggests that in E. coli, the ArcC paralog YqeA may be a second isozyme, while the paralog YahI branches as an outlier and is less likely to be an authentic carbamate kinase. The homolog from Mycoplasma pneumoniae likewise branches outside the set containing known carbamate kinases and also scores below the trusted cutoff. |
| >PRK09411 carbamate kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-29 Score=256.25 Aligned_cols=245 Identities=22% Similarity=0.202 Sum_probs=190.9
Q ss_pred CeEEEEeCCccCCCCC-----------hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHH
Q 007903 100 GTFVVIISGEIVSSPY-----------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESL 168 (585)
Q Consensus 100 k~iVIKlGGs~l~~~~-----------l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rvt~~~~l 168 (585)
+++||.||||+|..+. .+..++.|+.|.+. +++||+||+|||++.++.+...... .++.+|
T Consensus 2 ~~iVvAlGGNAl~~~g~~~~~~~q~~~v~~~a~~ia~l~~~-~~~vitHGNGPQVG~l~~~~~~~~~-------~~~~pl 73 (297)
T PRK09411 2 KTLVVALGGNALLQRGEALTAENQYRNIASAVPALARLARS-YRLAIVHGNGPQVGLLALQNLAWKE-------VEPYPL 73 (297)
T ss_pred CeEEEEcCchhhcCCCCCcCHHHHHHHHHHHHHHHHHHHHc-CCEEEEeCCccHHHHHHHHHHhhcC-------CCCCCc
Confidence 6899999999997622 46789999999887 9999999999999988766443321 255678
Q ss_pred HHH-HHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcce----eEEeeecCcceee-eeecccc------------cc---
Q 007903 169 AAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWH----EVGVSVASGNFLA-AKRKGVV------------DG--- 227 (585)
Q Consensus 169 ~~~-~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~----av~l~~~dg~~~~-a~~~g~~------------~g--- 227 (585)
+++ .++.|.+.|+|++.|++ .+++.++. ++.++..|..|-. .||.|.+ +|
T Consensus 74 d~~~a~sqG~iGy~l~q~l~~---------~~~~~~v~t~~Tq~~Vd~~DpaF~~PtKpiG~~y~~e~a~~l~~e~g~~~ 144 (297)
T PRK09411 74 DVLVAESQGMIGYMLAQSLSA---------QPQMPPVTTVLTRIEVSPDDPAFLQPEKFIGPVYQPEEQEALEAAYGWQM 144 (297)
T ss_pred hhhhhhcccHHHHHHHHHHHH---------cCCCCCeEEEEEEEEECCCCccccCCCCccCCccCHHHHHHHHHhcCCEE
Confidence 876 67999999999998743 36555443 4667888877776 3555531 11
Q ss_pred -ccCcceeeE-------EEecHHHHHHHHcCCCeEEEc-----CCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecc
Q 007903 228 -VDYGATGEV-------KKVDVTRMRERLDGGCLVILS-----NLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDG 294 (585)
Q Consensus 228 -~d~g~~G~v-------~~v~~~~I~~lL~~G~IPVi~-----~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV 294 (585)
.|-++.++| +.+|.+.|+.||++|+|||++ |++.+.+|...|+|+|.+|+.||.+|+||+|||||||
T Consensus 145 ~~dg~g~rrVVpSP~P~~iVe~~~I~~Ll~~G~IVI~~gGGGIPV~~~~~G~e~vIDkD~~Aa~LA~~L~Ad~LIiLTDV 224 (297)
T PRK09411 145 KRDGKYLRRVVASPQPRKILDSEAIELLLKEGHVVICSGGGGVPVTEDGAGSEAVIDKDLAAALLAEQINADGLVILTDA 224 (297)
T ss_pred EecCCceEEEccCCCCcceECHHHHHHHHHCCCEEEecCCCCCCeEEcCCCeEEecCHHHHHHHHHHHhCCCEEEEEeCc
Confidence 232345677 899999999999999999998 6766666888999999999999999999999999999
Q ss_pred cccC-----CCCcccccccHHHHHHHHHhhchhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccC
Q 007903 295 PILD-----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNN 369 (585)
Q Consensus 295 ~gl~-----~~~~lI~~it~~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (585)
||++ +++++|++++.+|+++++..
T Consensus 225 dGV~~n~~~p~~~~I~~it~~e~~~~~~~--------------------------------------------------- 253 (297)
T PRK09411 225 DAVYENWGTPQQRAIRHATPDELAPFAKA--------------------------------------------------- 253 (297)
T ss_pred hhhccCCCCCCCcCCCCcCHHHHHHhccC---------------------------------------------------
Confidence 9983 46789999999888666421
Q ss_pred CccccCCCCCcccccccccccccccccccCcHHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeec
Q 007903 370 GVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (585)
Q Consensus 370 ~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~ 444 (585)
+| | |.||++||+.+++.|..+++|.+ ... +.+++.++ .||.|.
T Consensus 254 -----~G-g---------------------M~pKVeAA~~~v~~~g~~a~I~~---l~~-~~~~l~G~-~GT~I~ 296 (297)
T PRK09411 254 -----DG-A---------------------MGPKVTAVSGYVRSRGKPAWIGA---LSR-IEETLAGE-AGTCIS 296 (297)
T ss_pred -----CC-C---------------------cHHHHHHHHHHHHhCCCeEEECC---hhH-HHHHHCCC-CCeEEe
Confidence 25 5 89999999999998888888875 233 45666554 899984
|
|
| >PF00696 AA_kinase: Amino acid kinase family Match to Glutamate-5-kinases, C-terminal end of the alignment Match to Aspartate kinases; InterPro: IPR001048 This entry contains proteins with various specificities and includes the aspartate, glutamate and uridylate kinase families | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-29 Score=253.24 Aligned_cols=192 Identities=33% Similarity=0.443 Sum_probs=165.0
Q ss_pred CeEEEEeCCccCCCC--ChHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHH-HHHHh
Q 007903 100 GTFVVIISGEIVSSP--YLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAAG 176 (585)
Q Consensus 100 k~iVIKlGGs~l~~~--~l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~-~~~~G 176 (585)
|++|||+||++++++ .+.+++++|+.|.+.|+++|||||||++++.+++.+++.+++.++.|+|+...+..+ +.+++
T Consensus 1 k~~ViK~GGs~l~~~~~~~~~~~~~i~~l~~~g~~vvvV~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~ 80 (242)
T PF00696_consen 1 KTIVIKLGGSSLTDKDEELRELADDIALLSQLGIKVVVVHGGGSFTDELLEKYGIEPKFVDGSRVTDIETGLIITMAAAA 80 (242)
T ss_dssp SEEEEEE-HHGHSSHSHHHHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHCTHTTSEETHHCHBHHHHHHHHHHHHHH
T ss_pred CeEEEEECchhhCCchHHHHHHHHHHHHHHhCCCeEEEEECChhhcCchHHhccCCcccchhhhhhhhhhhHHHHHHHhh
Confidence 689999999999987 589999999999999999999999999999999999999999989999999888876 56777
Q ss_pred HHHH-----HHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHHcCC
Q 007903 177 GIRM-----MIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGG 251 (585)
Q Consensus 177 ~i~~-----~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL~~G 251 (585)
++|. .+++. +..++.. .+++.+.+.++....+.. ..++.+.|+++|++|
T Consensus 81 ~l~~~~~~~~i~~~---------~~~~~~~----~~~~~~~~~~~~~~~~~~-------------~~~~~~~i~~~l~~~ 134 (242)
T PF00696_consen 81 ELNRDALLDEIVSA---------GERLGAH----AVGLSLSDGGISAAKRDA-------------REVDKEAIRELLEQG 134 (242)
T ss_dssp HHHHHHHHHHHHHH---------HHHCTHH----EEEHHHTGGTEEEEEEES-------------SEEHHHHHHHHHHTT
T ss_pred ccccchhHHHHHHh---------hhhhhHH----HHhhhhhcccchhhhhhh-------------hhhHHHHHHHHHHCC
Confidence 8887 56554 4566654 677777776666543210 157899999999999
Q ss_pred CeEEEcCCc-cCCCCce---eeeChHHHHHHHHHHcCCCEEEEeecccccC-------CCCcccccccHHHHHHHHH
Q 007903 252 CLVILSNLG-YSSSGEV---LNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIR 317 (585)
Q Consensus 252 ~IPVi~~v~-~~~~G~~---~nid~D~lAa~lA~~L~AdkLIilTDV~gl~-------~~~~lI~~it~~e~~~li~ 317 (585)
.|||++|.+ .+.+|++ .++++|.+|++||.+|+|++|+|+|||||++ +++++|++|+.+|++++..
T Consensus 135 ~ipVv~g~~~~~~~g~~~~~~~~~sD~~A~~lA~~l~A~~li~~tdV~Gv~~~dP~~~~~~~~i~~l~~~e~~~l~~ 211 (242)
T PF00696_consen 135 IIPVVSGFAGIDDDGEVTTLGNVSSDYIAALLAAALGADKLIFLTDVDGVYTADPRIVPDARLIPELSYDEAEELAS 211 (242)
T ss_dssp SEEEEESEEEEETTSTEEEEEEETHHHHHHHHHHHTTCSEEEEEESSSSEBSSSTTTSTTSEBESEEEHHHHHHHHH
T ss_pred CEEEEeCCcccCCCCCcccCCCCCHHHHHHHHHHHhCchhhhhhhhcCceeecCCCCCCCCeeeeEeeHHHHHHHHh
Confidence 999999976 8889998 9999999999999999999999999999983 4789999999999999874
|
In prokaryotes and plants the synthesis of the essential amino acids lysine and threonine is predominantly regulated by feed-back inhibition of aspartate kinase (AK) and dihydrodipicolinate synthase (DHPS). In Escherichia coli, thrA, metLM, and lysC encode aspartokinase isozymes that show feedback inhibition by threonine, methionine, and lysine, respectively []. The lysine-sensitive isoenzyme of aspartate kinase from spinach leaves has a subunit composition of 4 large and 4 small subunits []. In plants although the control of carbon fixation and nitrogen assimilation has been studied in detail, relatively little is known about the regulation of carbon and nitrogen flow into amino acids. The metabolic regulation of expression of an Arabidopsis thaliana aspartate kinase/homoserine dehydrogenase (AK/HSD) gene, which encodes two linked key enzymes in the biosynthetic pathway of aspartate family amino acids has been studied []. The conversion of aspartate into either the storage amino acid asparagine or aspartate family amino acids may be subject to a coordinated, reciprocal metabolic control, and this biochemical branch point is a part of a larger, coordinated regulatory mechanism of nitrogen and carbon storage and utilization.; GO: 0008652 cellular amino acid biosynthetic process; PDB: 2X2W_B 2WXB_B 1B7B_C 2J4L_F 2J4K_E 2J4J_F 2OGX_B 3QUO_A 3D40_A 3D41_A .... |
| >cd04235 AAK_CK AAK_CK: Carbamate kinase (CK) catalyzes both the ATP-phosphorylation of carbamate and carbamoyl phosphate (CP) utilization with the production of ATP from ADP and CP | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.4e-29 Score=256.53 Aligned_cols=253 Identities=19% Similarity=0.219 Sum_probs=190.3
Q ss_pred eEEEEeCCccCCCCC-----------hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHH
Q 007903 101 TFVVIISGEIVSSPY-----------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLA 169 (585)
Q Consensus 101 ~iVIKlGGs~l~~~~-----------l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rvt~~~~l~ 169 (585)
++||||||++|..+. ++..+++|+.|.+.|+++|||||+|||++.++....... ..+++..|+
T Consensus 1 rivialgGnal~~~~~~~~~~~q~~~~~~~a~~i~~l~~~g~~vvi~hGnGPqvG~i~~~~~~~~------~~~~~~pld 74 (308)
T cd04235 1 RIVVALGGNALLRRGEPGTAEEQRENVKIAAKALADLIKNGHEVVITHGNGPQVGNLLLQNEAAA------EKVPAYPLD 74 (308)
T ss_pred CEEEEecHHHhCCCCCCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHHhcc------ccCCCCCcc
Confidence 589999999996421 688999999999999999999999999999877654432 123445666
Q ss_pred HH-HHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcce----eEEeeecCcceee-eeecccc-c-----------c----
Q 007903 170 AA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWH----EVGVSVASGNFLA-AKRKGVV-D-----------G---- 227 (585)
Q Consensus 170 ~~-~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~----av~l~~~dg~~~~-a~~~g~~-~-----------g---- 227 (585)
.+ ...+|.+.+.|..+|++ .|.++|++.++. ++.+...|..|-. .||.|.. + |
T Consensus 75 ~~~a~~~G~ig~~~~~al~~-----~l~~~~~~~~v~t~~t~~~V~~~dpaf~~ptKpiG~~y~~~~a~~~~~~~g~~~~ 149 (308)
T cd04235 75 VCGAMSQGMIGYMLQQALDN-----ELPKRGIDKPVVTLVTQVVVDANDPAFKNPTKPIGPFYSEEEAEELAAEKGWTFK 149 (308)
T ss_pred hhcchhhHHHHHHHHHHHHH-----HHHHcCCCCceEEEEeEEEEcCCCccccCCCCCcCCCcCHHHHHHHHHHcCCEEE
Confidence 65 57899999999988875 889999887654 3446666666555 3555421 1 0
Q ss_pred --ccCccee------eEEEecHHHHHHHHcCCCeEEEc-----CCccCCCCcee----eeChHHHHHHHHHHcCCCEEEE
Q 007903 228 --VDYGATG------EVKKVDVTRMRERLDGGCLVILS-----NLGYSSSGEVL----NCNTYEVATACALAIEADKLIC 290 (585)
Q Consensus 228 --~d~g~~G------~v~~v~~~~I~~lL~~G~IPVi~-----~v~~~~~G~~~----nid~D~lAa~lA~~L~AdkLIi 290 (585)
..-||.- .++.++.+.|+.||++|+|||++ |+..+. +.++ ++|+|++|++||.+|+||+|++
T Consensus 150 ~d~~~g~rrvV~SP~P~~iv~~~~I~~Ll~~g~IpI~~GggGiPv~~~~-~~~~gveaVid~D~~AallA~~l~Ad~Lii 228 (308)
T cd04235 150 EDAGRGYRRVVPSPKPKDIVEIEAIKTLVDNGVIVIAAGGGGIPVVREG-GGLKGVEAVIDKDLASALLAEEINADLLVI 228 (308)
T ss_pred EeCCCCceeeeCCCCCccccCHHHHHHHHHCCCEEEEECCCccCEEEcC-CceeeeeeccCccHHHHHHHHHcCCCEEEE
Confidence 0122332 23678899999999999999999 554443 4444 5799999999999999999999
Q ss_pred eecccccC-----CCCcccccccHHHHHHHHHhhchhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhc
Q 007903 291 IIDGPILD-----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIA 365 (585)
Q Consensus 291 lTDV~gl~-----~~~~lI~~it~~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (585)
+|||||++ +++++|++++.+|+.+++.++.
T Consensus 229 lTdVdGVy~~~~~pda~~i~~Is~~e~~~l~~~g~--------------------------------------------- 263 (308)
T cd04235 229 LTDVDNVYINFGKPNQKALEQVTVEELEKYIEEGQ--------------------------------------------- 263 (308)
T ss_pred EecCCeEECCCCCCCCeEcCCcCHHHHHHHHhcCc---------------------------------------------
Confidence 99999983 4689999999999888764321
Q ss_pred cccCCccccCCCCCcccccccccccccccccccCcHHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeec
Q 007903 366 TFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (585)
Q Consensus 366 ~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~ 444 (585)
|.+| | |.+|+++|+.+++.|...++|.+ .+. +.+++.++ .||.|.
T Consensus 264 -------~~tG-G---------------------M~pKv~aA~~~a~~gg~~v~I~~---~~~-i~~aL~G~-~GT~I~ 308 (308)
T cd04235 264 -------FAPG-S---------------------MGPKVEAAIRFVESGGKKAIITS---LEN-AEAALEGK-AGTVIV 308 (308)
T ss_pred -------cccC-C---------------------cHHHHHHHHHHHHhCCCeEEECC---HHH-HHHHHCCC-CCeEEC
Confidence 2345 5 89999999999998877788977 334 55666655 899873
|
Both CK (this CD) and nonhomologous CP synthetase synthesize carbamoyl phosphate, an essential precursor of arginine and pyrimidine bases, in the presence of ATP, bicarbonate, and ammonia. CK is a homodimer of 33 kDa subunits and is a member of the Amino Acid Kinase Superfamily (AAK). |
| >PRK13402 gamma-glutamyl kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-29 Score=266.51 Aligned_cols=292 Identities=18% Similarity=0.233 Sum_probs=203.1
Q ss_pred CCeEEEEeCCccCCCCC-------hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHH
Q 007903 99 GGTFVVIISGEIVSSPY-------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA 171 (585)
Q Consensus 99 ~k~iVIKlGGs~l~~~~-------l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~ 171 (585)
.+++|||+||+++++++ +..++++|+.|++.|+++||||||+++++. .+++.. ++.+++..++
T Consensus 5 ~kriVIKiGgs~L~~~~~~l~~~~i~~la~~I~~l~~~G~~vvlVsSGava~G~--~~l~~~----~~~~~~~~qa---- 74 (368)
T PRK13402 5 WKRIVVKVGSSLLTPHHQGCSSHYLLGLVQQIVYLKDQGHQVVLVSSGAVAAGY--HKLGFI----DRPSVPEKQA---- 74 (368)
T ss_pred CcEEEEEEchhhccCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCChhhcCc--cccCCC----CCCCccHHHH----
Confidence 47999999999998642 689999999999999999999999987765 445532 2335554433
Q ss_pred HHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEec-HHHHHHHHcC
Q 007903 172 MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVD-VTRMRERLDG 250 (585)
Q Consensus 172 ~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~-~~~I~~lL~~ 250 (585)
++++||.. ++..|.. .|+++|++ +.++...+..|...+ +..+ .+.|+.||+.
T Consensus 75 laavGq~~--l~~~~~~-----~f~~~g~~----~aqvLlT~~d~~~~~----------------~y~n~~~~l~~LL~~ 127 (368)
T PRK13402 75 MAAAGQGL--LMATWSK-----LFLSHGFP----AAQLLLTHGDLRDRE----------------RYINIRNTINVLLER 127 (368)
T ss_pred HHHhhHHH--HHHHHHH-----HHHHCCCe----EEEEEEecchhhhHH----------------HHHHHHHHHHHHHHC
Confidence 45678876 6666643 78999987 333322222221110 0112 3799999999
Q ss_pred CCeEEEcCC-ccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC---C----CCcccccccH--HHHHHHHHhhc
Q 007903 251 GCLVILSNL-GYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD---E----SGHLIRFLTL--QEADSLIRQRV 320 (585)
Q Consensus 251 G~IPVi~~v-~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~---~----~~~lI~~it~--~e~~~li~~~~ 320 (585)
|+|||+++. .+. ..++.+.|+|++|+.+|.+|+||.|+++|||||++ | ++++|++|+. +|+..+..
T Consensus 128 g~IPIinenD~v~-~~el~~GdnD~lAa~vA~~l~Ad~LiilTDVdGvy~~dP~~~p~a~~I~~I~~i~~e~~~l~~--- 203 (368)
T PRK13402 128 GILPIINENDAVT-TDRLKVGDNDNLSAMVAALADADTLIILSDIDGLYDQNPRTNPDAKLIKQVTEINAEIYAMAG--- 203 (368)
T ss_pred CcEEEEeCCCcEe-ecccccCChHHHHHHHHHHhCCCEEEEEecCCeEEeCCCCCCCCCEEEEEeccCcHHHHHHhc---
Confidence 999999962 222 23566789999999999999999999999999983 3 6899999985 34433321
Q ss_pred hhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccCc
Q 007903 321 KQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGY 400 (585)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m 400 (585)
+.++.+++| | |
T Consensus 204 -----------------------------------------------~~~s~~gtG-G---------------------M 214 (368)
T PRK13402 204 -----------------------------------------------GAGSNVGTG-G---------------------M 214 (368)
T ss_pred -----------------------------------------------ccccCcCcC-C---------------------c
Confidence 122345566 6 8
Q ss_pred HHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeeccccc-ccccccc-----------ccCHHHHHHHHHH
Q 007903 401 LSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLY-EGTRTAK-----------VTDLSGIKQIIQP 468 (585)
Q Consensus 401 ~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~~d~~-~~IR~at-----------~~D~~~I~~Li~~ 468 (585)
.+||+||..|.+.|++ ++|++|..++. |.+++.++..||+|.+... ..-|+.+ .-|..+..+|
T Consensus 215 ~~Kl~Aa~~a~~~gi~-v~I~~g~~~~~-l~~~l~g~~~GT~i~~~~~~~~~rk~Wi~~~~~~~G~i~vd~ga~~al--- 289 (368)
T PRK13402 215 RTKIQAAKIAMSHGIE-TFIGNGFTADI-FNQLLKGQNPGTYFTPEEKPMQEKKHWMAHTSGPQGEIVVENDFDRAL--- 289 (368)
T ss_pred hHHHHHHHHHHHcCCc-EEEEcCCCchH-HHHHhcCCCCceEEecCCCCccHHHHHHhCCCCCCeeEEECccHHHHH---
Confidence 9999999999999998 89999999986 6778888889999976432 2222222 2344455554
Q ss_pred HHHc-cccccCCHHHHHhcc---CeEEEEEECCeEEEEEEEe
Q 007903 469 LVES-GALVRRTDEELLKAL---DSFYVVEREGQIIACAALF 506 (585)
Q Consensus 469 ~~~~-~~~~~~~~e~l~~~i---~~~~Va~~dg~IVG~~~l~ 506 (585)
... ..++|.....++..| +.+-+...+|+.+|.+...
T Consensus 290 -~~~~~sLl~~gi~~v~g~F~~gd~v~i~~~~g~~~~rg~~~ 330 (368)
T PRK13402 290 -DNHSEQLTSDDVVEIKGDFSVGDTILVRKGDGTKLAKGKSN 330 (368)
T ss_pred -HhcCCcccccceEEEeCEecCCCEEEEECCCCCEEEEEEcc
Confidence 222 234444444455555 4566667778888887776
|
|
| >PRK05429 gamma-glutamyl kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-28 Score=263.19 Aligned_cols=293 Identities=20% Similarity=0.259 Sum_probs=206.8
Q ss_pred CCeEEEEeCCccCCCCC-------hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHH
Q 007903 99 GGTFVVIISGEIVSSPY-------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA 171 (585)
Q Consensus 99 ~k~iVIKlGGs~l~~~~-------l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~ 171 (585)
.+++|||+||++++++. +..++++|+.+++.|+++||||||+ +...+..++++.++ ......+ +
T Consensus 8 ~~~iVIKiGGs~l~~~~~~l~~~~i~~la~~I~~l~~~g~~vViV~sGa--i~~g~~~l~l~~~~------~~~~~~q-a 78 (372)
T PRK05429 8 ARRIVVKVGSSLLTGGGGGLDRARIAELARQIAALRAAGHEVVLVSSGA--VAAGRERLGLPERP------KTLAEKQ-A 78 (372)
T ss_pred CCEEEEEeChhhccCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEcccH--hhhhHhhcCCCCCC------CchHHHH-H
Confidence 47999999999998732 6899999999999999999999984 55666677776432 1222222 3
Q ss_pred HHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEec-HHHHHHHHcC
Q 007903 172 MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVD-VTRMRERLDG 250 (585)
Q Consensus 172 ~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~-~~~I~~lL~~ 250 (585)
+++.||.. ++..|. ..|+++|++ +.++...+..|.. +.+.+| .+.|+.||+.
T Consensus 79 ~aavGq~~--L~~~~~-----~~l~~~gi~----~~qil~t~~d~~~----------------~~~~ln~~~~i~~Ll~~ 131 (372)
T PRK05429 79 AAAVGQSR--LMQAYE-----ELFARYGIT----VAQILLTRDDLED----------------RERYLNARNTLRTLLEL 131 (372)
T ss_pred HHHHhHHH--HHHHHH-----HHHHHCCCC----EEEEEeehhHhhh----------------hhHhhhHHHHHHHHHHC
Confidence 45677744 555553 378999987 4443222222221 112345 5899999999
Q ss_pred CCeEEEcCC-ccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC-------CCCcccccccH--HHHHHHHHhhc
Q 007903 251 GCLVILSNL-GYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTL--QEADSLIRQRV 320 (585)
Q Consensus 251 G~IPVi~~v-~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~-------~~~~lI~~it~--~e~~~li~~~~ 320 (585)
|+|||+++. .+. ..++.++|+|++|++||.+|+||+|+|+|||||++ |++++|++++. +|+++++..
T Consensus 132 g~IPVi~~nd~v~-~~~l~~gd~D~~Aa~lA~~l~Ad~LiilTDVdGVy~~dP~~~p~a~~I~~i~~~~~e~~~~~~~-- 208 (372)
T PRK05429 132 GVVPIINENDTVA-TDEIKFGDNDTLSALVANLVEADLLILLTDVDGLYTADPRKNPDAKLIPEVEEITDELEAMAGG-- 208 (372)
T ss_pred CCEEEEcCCCccc-eecccccChHHHHHHHHHHcCCCEEEEecCCCeeEcCCCCCCCCceEEEEeccCCHHHHHHhcC--
Confidence 999999852 222 12456789999999999999999999999999983 35899999986 456555421
Q ss_pred hhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccCc
Q 007903 321 KQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGY 400 (585)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m 400 (585)
.++.+++| | |
T Consensus 209 ------------------------------------------------~~~~~gtG-G---------------------M 218 (372)
T PRK05429 209 ------------------------------------------------AGSGLGTG-G---------------------M 218 (372)
T ss_pred ------------------------------------------------CCCCcCcC-C---------------------c
Confidence 11234456 5 8
Q ss_pred HHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeeccccc-ccccc-----------ccccCHHHHHHHHHH
Q 007903 401 LSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLY-EGTRT-----------AKVTDLSGIKQIIQP 468 (585)
Q Consensus 401 ~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~~d~~-~~IR~-----------at~~D~~~I~~Li~~ 468 (585)
.+||+||..|.+.|++ ++|+||..++. |.+++.+++.||+|.+... ..-|+ ...-|-.+...|
T Consensus 219 ~~Kl~aa~~a~~~Gi~-v~I~~g~~~~~-l~~~l~g~~~GT~i~~~~~~~~~~k~wi~~~~~~~g~i~vd~gA~~al--- 293 (372)
T PRK05429 219 ATKLEAARIATRAGIP-VVIASGREPDV-LLRLLAGEAVGTLFLPQEKPLSARKRWIAGALQPAGEIVVDAGAVKAL--- 293 (372)
T ss_pred HHHHHHHHHHHHCCCe-EEEEcCCCccH-HHHHhcCCCCCEEEeeCCccchHHHHHHhcCCCCCCeEEECccHHHHH---
Confidence 9999999999999998 99999999986 7888888899999986532 22222 223354555555
Q ss_pred HHHc-cccccCCHHHHHhcc---CeEEEEEECCeEEEEEEEe
Q 007903 469 LVES-GALVRRTDEELLKAL---DSFYVVEREGQIIACAALF 506 (585)
Q Consensus 469 ~~~~-~~~~~~~~e~l~~~i---~~~~Va~~dg~IVG~~~l~ 506 (585)
... ..+++.....++..+ +.+.+...+|+.+|.+...
T Consensus 294 -~~~g~sLl~~Gi~~v~g~f~~gd~V~i~~~~g~~va~G~~~ 334 (372)
T PRK05429 294 -LERGKSLLPAGVTAVEGDFSRGDVVRIVDPDGREIARGLVN 334 (372)
T ss_pred -HhcCCccCccchhheECcccCCCEEEEECCCCCEEEEEEec
Confidence 222 234444556666666 5677778889999998876
|
|
| >COG0549 ArcC Carbamate kinase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-28 Score=242.23 Aligned_cols=257 Identities=19% Similarity=0.195 Sum_probs=200.6
Q ss_pred CeEEEEeCCccCCCCC-----------hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHH
Q 007903 100 GTFVVIISGEIVSSPY-----------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESL 168 (585)
Q Consensus 100 k~iVIKlGGs~l~~~~-----------l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rvt~~~~l 168 (585)
++|||.||||+|..+. ++..+++|+.|.+.|+++||+||+|||++.++.......+.. -+++..|
T Consensus 1 ~~iVvALGGNAll~~g~~~tae~Q~~~v~~ta~~i~~l~~~g~e~VitHGNGPQVG~l~lq~~aa~~~~----~~p~~PL 76 (312)
T COG0549 1 KRIVVALGGNALLQRGEPLTAEAQYEAVKITAEQIADLIASGYEVVITHGNGPQVGLLLLQNEAADSEK----GVPAYPL 76 (312)
T ss_pred CeEEEEecchhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHhhhhcccc----CCCCccH
Confidence 5799999999997641 678899999999999999999999999999877654422111 1345677
Q ss_pred HHH-HHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcce----eEEeeecCcceee-eeecccc-----------------
Q 007903 169 AAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWH----EVGVSVASGNFLA-AKRKGVV----------------- 225 (585)
Q Consensus 169 ~~~-~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~----av~l~~~dg~~~~-a~~~g~~----------------- 225 (585)
+.+ .++.|.+.++|.++|++ .|.++|++.++. ++.+...|..|.. .||.|++
T Consensus 77 d~~~AmsQG~IGy~l~qal~n-----~l~~~~~~~~v~tvvTqv~VD~nDPAF~nPtKpIGpfY~~eea~~l~~~~gw~~ 151 (312)
T COG0549 77 DVLVAMSQGMIGYMLQQALRN-----ELPRRGLEKPVVTVVTQVEVDANDPAFLNPTKPIGPFYSEEEAEELAKEYGWVF 151 (312)
T ss_pred HHHhHhhhhHHHHHHHHHHHH-----HHhhcCCCCceeEEEEEEEEcCCCccccCCCCCCCCCcCHHHHHHHHhhcCcEE
Confidence 775 67999999999999976 788889765543 4668888888887 4666742
Q ss_pred -ccccCcceee------EEEecHHHHHHHHcCCCeEEEc-----CCccCCC---CceeeeChHHHHHHHHHHcCCCEEEE
Q 007903 226 -DGVDYGATGE------VKKVDVTRMRERLDGGCLVILS-----NLGYSSS---GEVLNCNTYEVATACALAIEADKLIC 290 (585)
Q Consensus 226 -~g~d~g~~G~------v~~v~~~~I~~lL~~G~IPVi~-----~v~~~~~---G~~~nid~D~lAa~lA~~L~AdkLIi 290 (585)
+..+.||... ++.++.+.|+.|++.|.++|.+ |+..+.. |---+||.|..++.||..++||.||+
T Consensus 152 keD~~rG~RRVVpSP~P~~IvE~~~Ik~L~~~g~vVI~~GGGGIPVv~~~~~~~GVeAVIDKDlasalLA~~i~AD~liI 231 (312)
T COG0549 152 KEDAGRGYRRVVPSPKPVRIVEAEAIKALLESGHVVIAAGGGGIPVVEEGAGLQGVEAVIDKDLASALLAEQIDADLLII 231 (312)
T ss_pred EecCCCCeeEecCCCCCccchhHHHHHHHHhCCCEEEEeCCCCcceEecCCCcceeeEEEccHHHHHHHHHHhcCCEEEE
Confidence 1123344432 3678899999999999999998 3444443 44568999999999999999999999
Q ss_pred eecccccC-----CCCcccccccHHHHHHHHHhhchhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhc
Q 007903 291 IIDGPILD-----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIA 365 (585)
Q Consensus 291 lTDV~gl~-----~~~~lI~~it~~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (585)
|||||.++ |+.+.+++++.+|++++++++
T Consensus 232 LTdVd~Vy~n~gkp~q~~L~~v~~~e~~~yl~eg---------------------------------------------- 265 (312)
T COG0549 232 LTDVDAVYVNFGKPNQQALDRVTVDEMEKYLAEG---------------------------------------------- 265 (312)
T ss_pred EeccchheecCCCccchhhcccCHHHHHHHHhcC----------------------------------------------
Confidence 99999873 678999999999999998762
Q ss_pred cccCCccccCCCCCcccccccccccccccccccCcHHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeec
Q 007903 366 TFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (585)
Q Consensus 366 ~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~ 444 (585)
.||.|+ |.||++||+.+++++-+++.|.+- +. +.+.+ ....||.|.
T Consensus 266 -------------------~Fa~GS---------M~PKVeAai~Fv~~~gk~A~ItsL--e~--~~~~l-~g~~GT~I~ 311 (312)
T COG0549 266 -------------------QFAAGS---------MGPKVEAAISFVENTGKPAIITSL--EN--AEAAL-EGKAGTVIV 311 (312)
T ss_pred -------------------CCCCCC---------ccHHHHHHHHHHHcCCCceEECcH--HH--HHHHh-ccCCCcEec
Confidence 256666 999999999999999998888762 21 34444 567899985
|
|
| >cd04256 AAK_P5CS_ProBA AAK_P5CS_ProBA: Glutamate-5-kinase (G5K) domain of the bifunctional delta 1-pyrroline-5-carboxylate synthetase (P5CS), composed of an N-terminal G5K (ProB) and a C-terminal glutamyl 5- phosphate reductase (G5PR, ProA), the first and second enzyme catalyzing proline (and, in mammals, ornithine) biosynthesis | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.6e-29 Score=254.65 Aligned_cols=246 Identities=17% Similarity=0.179 Sum_probs=174.5
Q ss_pred CCeEEEEeCCccCCCCC--------hHHHHHHHHHHHHCCCeEE-EEeCchHHHHHHHHHcCC-cc----cccCCccCCC
Q 007903 99 GGTFVVIISGEIVSSPY--------LDPILKDIAFLHHLGIRFV-LVPGTHVQIDKLLSERGH-EA----KYLGRYRITD 164 (585)
Q Consensus 99 ~k~iVIKlGGs~l~~~~--------l~~l~~~Ia~L~~~G~~vV-lVhGgg~~i~~~l~~~g~-~~----~~~~g~rvt~ 164 (585)
.+++|||+||++|++++ +..++++|+.|++.|+++| |+||++.+.+..+...+. .. ....+.++..
T Consensus 8 ~~~iVvKiGss~lt~~~~~~~~~~~l~~l~~~i~~l~~~g~~vilVssGAv~~G~~~l~~~~~~~~~~~~~~~g~~~~~~ 87 (284)
T cd04256 8 AKRIVVKLGSAVVTREDECGLALGRLASIVEQVSELQSQGREVILVTSGAVAFGKQRLRHEILLSSSMRQTLKSGQLKDM 87 (284)
T ss_pred CCEEEEEeCchhccCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEeeCcHHhChHHhhhccccccchhhhcccccccCC
Confidence 48999999999998753 6899999999999999999 666667666666654332 00 0111112222
Q ss_pred HHHHH--HHHHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHH
Q 007903 165 SESLA--AAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVT 242 (585)
Q Consensus 165 ~~~l~--~~~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~ 242 (585)
+..+. .+.+++||.. |++.|++ .|.+++++ +.++-++-. ||.... ......+
T Consensus 88 ~~~~~~~qa~aa~gq~~--L~~~y~~-----~f~~~~~~--~~q~llt~~----------------d~~~~~-~~~~~~~ 141 (284)
T cd04256 88 PQMELDGRACAAVGQSG--LMALYEA-----MFTQYGIT--VAQVLVTKP----------------DFYDEQ-TRRNLNG 141 (284)
T ss_pred cchhHHHHHHHHcccHH--HHHHHHH-----HHHHcCCc--HHHeeeecc----------------ccccHH-HHHHHHH
Confidence 22222 3467888876 8888875 89999987 223322221 222110 1123468
Q ss_pred HHHHHHcCCCeEEEcC-CccC------CCCcee--eeChHHHHHHHHHHcCCCEEEEeecccccC------CCCcccccc
Q 007903 243 RMRERLDGGCLVILSN-LGYS------SSGEVL--NCNTYEVATACALAIEADKLICIIDGPILD------ESGHLIRFL 307 (585)
Q Consensus 243 ~I~~lL~~G~IPVi~~-v~~~------~~G~~~--nid~D~lAa~lA~~L~AdkLIilTDV~gl~------~~~~lI~~i 307 (585)
.|+.||+.|+|||+++ .++. .+|+.+ ++|+|++|+++|.+++||+||++|||||++ |++++|+++
T Consensus 142 ~l~~lL~~g~iPVi~~nD~v~~~~~~~~~~~~~~~i~d~D~lAa~lA~~l~Ad~Li~lTDVdGVy~~dP~~~~a~~I~~i 221 (284)
T cd04256 142 TLEELLRLNIIPIINTNDAVSPPPEPDEDLQGVISIKDNDSLAARLAVELKADLLILLSDVDGLYDGPPGSDDAKLIHTF 221 (284)
T ss_pred HHHHHHHCCCEEEEeCCCcccccccccccccccccccChHHHHHHHHHHcCCCEEEEEeCCCeeecCCCCCCCCeEcccc
Confidence 9999999999999985 2222 234444 489999999999999999999999999983 358999999
Q ss_pred cHHHHHHHHHhhchhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccc
Q 007903 308 TLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFA 387 (585)
Q Consensus 308 t~~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a 387 (585)
+..+.+.+... .++.+++| |
T Consensus 222 ~~~~~~~~~~~--------------------------------------------------~~s~~gtG-G--------- 241 (284)
T cd04256 222 YPGDQQSITFG--------------------------------------------------TKSRVGTG-G--------- 241 (284)
T ss_pred cHhHHHHhhcc--------------------------------------------------cccCcccC-C---------
Confidence 97665433211 11233456 5
Q ss_pred cccccccccccCcHHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeec
Q 007903 388 IGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (585)
Q Consensus 388 ~~~~~~~~~~~~m~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~ 444 (585)
|.+||+||..|.+.|++ ++|++|..++. |.+++.++..||+|.
T Consensus 242 ------------M~~Kl~Aa~~a~~~Gi~-v~I~~G~~~~~-i~~~l~G~~~GT~~~ 284 (284)
T cd04256 242 ------------MEAKVKAALWALQGGTS-VVITNGMAGDV-ITKILEGKKVGTFFT 284 (284)
T ss_pred ------------cHHHHHHHHHHHHCCCe-EEEEcCCCccH-HHHHHcCCCCCEEeC
Confidence 89999999999999998 89999999987 678888889999983
|
G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, and is subject to feedback allosteric inhibition by proline or ornithine. In plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia. |
| >PRK12354 carbamate kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.9e-29 Score=253.59 Aligned_cols=252 Identities=20% Similarity=0.188 Sum_probs=184.7
Q ss_pred CeEEEEeCCccCCCCC-----------hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHH
Q 007903 100 GTFVVIISGEIVSSPY-----------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESL 168 (585)
Q Consensus 100 k~iVIKlGGs~l~~~~-----------l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rvt~~~~l 168 (585)
.++|||||||+|.++. ++..++.|+.|.+ |+++||+||+|||++.++.+..... ..++.+|
T Consensus 1 ~~iVialGGnal~~~~~~~~~~~~~~~v~~~a~~ia~~~~-~~~vvi~HGnGpqvG~~~~~~~~~~-------~~~~~pl 72 (307)
T PRK12354 1 MRIVVALGGNALLRRGEPLTAENQRANIRIAAEQIAKIAR-EHELVIVHGNGPQVGLLALQNAAYK-------DVTPYPL 72 (307)
T ss_pred CeEEEEeccHHhCCCCCCcCHHHHHHHHHHHHHHHHHHhC-CCeEEEEeCCccHHhHHHHHHHHhc-------CCCCCCc
Confidence 3799999999998743 4578899999887 9999999999999986654432221 1144566
Q ss_pred HHH-HHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceee-eeecccc----------------ccccC
Q 007903 169 AAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLA-AKRKGVV----------------DGVDY 230 (585)
Q Consensus 169 ~~~-~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~-a~~~g~~----------------~g~d~ 230 (585)
+.+ .++.|.+.++|++.|.+ +|.+..+.+-+.++.+...|..|-. .|+.|++ -..|-
T Consensus 73 ~~~~a~sqg~iGy~l~q~l~~-----~l~~~~v~tivtq~~Vd~~dpAf~~ptKpiG~~y~~~~a~~~~~e~g~~~~~dg 147 (307)
T PRK12354 73 DVLGAETEGMIGYMLEQELGN-----LLPERPVATLLTQVEVDANDPAFANPTKPIGPVYDEAEAERLAAEKGWTIKPDG 147 (307)
T ss_pred chhcccccchHHHHHHHHHHH-----HhcCCcceEEEEEEEEcCCCCccCCCCCCcCcccCHHHHHHHHHhcCCEEeecC
Confidence 665 56889999999998865 4544344333445667777776655 3444321 01221
Q ss_pred cceeeEE-------EecHHHHHHHHcCCCeEEEc-----CCccCCCCceee----eChHHHHHHHHHHcCCCEEEEeecc
Q 007903 231 GATGEVK-------KVDVTRMRERLDGGCLVILS-----NLGYSSSGEVLN----CNTYEVATACALAIEADKLICIIDG 294 (585)
Q Consensus 231 g~~G~v~-------~v~~~~I~~lL~~G~IPVi~-----~v~~~~~G~~~n----id~D~lAa~lA~~L~AdkLIilTDV 294 (585)
++.++|. .++.+.|+.||++|+|||++ |+..+.+++.++ +|+|.+|+.||.+|+||+|+|||||
T Consensus 148 ~g~rrVv~SP~P~~ive~~~I~~Ll~~g~ivIa~GGGGIPV~~~~~~~~~gv~aViD~D~~Aa~LA~~l~Ad~LiiLTdV 227 (307)
T PRK12354 148 DYFRRVVPSPRPKRIVEIRPIRWLLEKGHLVICAGGGGIPVVYDADGKLHGVEAVIDKDLAAALLAEQLDADLLLILTDV 227 (307)
T ss_pred CceEEEecCCCCcceeCHHHHHHHHHCCCEEEEeCCCccCeEecCCCceeeeeecCCccHHHHHHHHHcCCCEEEEEeCC
Confidence 2344554 78999999999999998887 777766565554 6899999999999999999999999
Q ss_pred cccC-----CCCcccccccHHHHHHHHHhhchhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccC
Q 007903 295 PILD-----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNN 369 (585)
Q Consensus 295 ~gl~-----~~~~lI~~it~~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (585)
||++ +++++|++++.+|++++ .
T Consensus 228 dGVy~~~~~p~~k~i~~it~~e~~~~--~--------------------------------------------------- 254 (307)
T PRK12354 228 DAVYLDWGKPTQRAIAQATPDELREL--G--------------------------------------------------- 254 (307)
T ss_pred cceecCCCCCCCeECCCCCHHHHHhh--C---------------------------------------------------
Confidence 9983 45789999998887665 1
Q ss_pred CccccCCCCCcccccccccccccccccccCcHHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeecccc
Q 007903 370 GVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDL 447 (585)
Q Consensus 370 ~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~~d~ 447 (585)
|.+| | |.+|++||+.+++.|..+++|.+ ... +.+++.++ .||+|.++.
T Consensus 255 ---f~~G-g---------------------M~pKV~AA~~~~~~gg~~viI~~---~~~-l~~al~G~-~GT~I~~~~ 302 (307)
T PRK12354 255 ---FAAG-S---------------------MGPKVEAACEFVRATGKIAGIGS---LED-IQAILAGE-AGTRISPET 302 (307)
T ss_pred ---CCcC-C---------------------hHHHHHHHHHHHHhCCCEEEECC---HHH-HHHHHCCC-CceEEecCC
Confidence 2245 5 89999999999998888888864 233 56777654 899997653
|
|
| >TIGR01027 proB glutamate 5-kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=254.62 Aligned_cols=293 Identities=17% Similarity=0.219 Sum_probs=202.0
Q ss_pred CeEEEEeCCccCCCCC-------hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHHH
Q 007903 100 GTFVVIISGEIVSSPY-------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAM 172 (585)
Q Consensus 100 k~iVIKlGGs~l~~~~-------l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~~ 172 (585)
+++|||+||+++++++ +..++++|+.|++.|+++|||||||.. ..+..++++.+. .+....+ ++
T Consensus 1 ~riVIKiGgs~l~~~~~~~~~~~i~~la~~I~~l~~~g~~vvlV~sG~~~--~g~~~lg~~~~~------~~l~~~q-a~ 71 (363)
T TIGR01027 1 QRIVVKVGSSSLTGSSGSLDRSHIAELVEQVAALHAAGHEVVIVSSGAIA--AGFEALGLPERP------KTLAEKQ-AL 71 (363)
T ss_pred CeEEEEeccceEeCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEeCcHHh--cCccccCCCCCc------cchHHHH-HH
Confidence 4799999999999864 689999999999999999999999843 345566665421 1222222 35
Q ss_pred HHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecH-HHHHHHHcCC
Q 007903 173 EAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDV-TRMRERLDGG 251 (585)
Q Consensus 173 ~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~-~~I~~lL~~G 251 (585)
++.||.. ++..|. ..|.++|++ +.++ +++.. ||.. +.+..|. +.|+.||+.|
T Consensus 72 aa~Gq~~--l~~~~~-----~~l~~~Gi~----~aqi------llt~~--------d~~~--~~~~lna~~~i~~Ll~~g 124 (363)
T TIGR01027 72 AAVGQVR--LMQLYE-----QLFSQYGIK----VAQI------LLTRA--------DFSD--RERYLNARNTLEALLELG 124 (363)
T ss_pred HHhChHH--HHHHHH-----HHHHHcCCe----EEEE------EEecc--------chhh--HHHHHHHHHHHHHHHhCC
Confidence 6777744 566553 278999987 2222 12211 1110 1123444 8999999999
Q ss_pred CeEEEcC-CccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC-------CCCcccccccHHH-HHHHHHhhchh
Q 007903 252 CLVILSN-LGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQE-ADSLIRQRVKQ 322 (585)
Q Consensus 252 ~IPVi~~-v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~-------~~~~lI~~it~~e-~~~li~~~~~~ 322 (585)
+|||+++ ..+.. .++.++|+|++|+.||.+|+||+|||+|||||++ |++++|++++..+ ....+..
T Consensus 125 ~iPVi~end~v~~-~~l~~gd~D~lAa~lA~~l~Ad~liilTDVdGVy~~dP~~~p~A~~I~~i~~~~~~~~~i~~---- 199 (363)
T TIGR01027 125 VVPIINENDTVAT-EEIKFGDNDTLSALVAILVGADLLVLLTDVDGLYDADPRTNPDAKLIPVVEEITDLLLGVAG---- 199 (363)
T ss_pred CEEEEeCCCceee-eecCcCChHHHHHHHHHHcCCCEEEEEeCCCcccCCCCCCCCCCeEEEEeccCcHHHHHhhc----
Confidence 9999984 22221 1344679999999999999999999999999983 3579999997532 1111111
Q ss_pred hhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccCcHH
Q 007903 323 SEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLS 402 (585)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~~ 402 (585)
+.++.+++| | |.+
T Consensus 200 ---------------------------------------------~~~~~~gtG-G---------------------M~~ 212 (363)
T TIGR01027 200 ---------------------------------------------DSGSSVGTG-G---------------------MRT 212 (363)
T ss_pred ---------------------------------------------CCCcCcCcC-C---------------------chH
Confidence 012335566 5 899
Q ss_pred HHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeeccccc-ccccc-----------ccccCHHHHHHHHHHHH
Q 007903 403 ELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLY-EGTRT-----------AKVTDLSGIKQIIQPLV 470 (585)
Q Consensus 403 kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~~d~~-~~IR~-----------at~~D~~~I~~Li~~~~ 470 (585)
||+||..|.+.|++ ++|+++..++. |.+++.++..||.|.+... ..-|+ ...-|..+...| .
T Consensus 213 Kl~Aa~~a~~~gi~-v~I~~g~~~~~-l~~~l~g~~~GT~i~~~~~~~~~~k~wi~~~~~~~G~i~vD~gA~~al----~ 286 (363)
T TIGR01027 213 KLQAADLATRAGVP-VIIASGSKPEK-IADALEGAPVGTLFHAQARRLRNRKFWIAFASEPAGEITVDAGAEEAL----L 286 (363)
T ss_pred HHHHHHHHHHCCCe-EEEEeCCCccH-HHHHhcCCCCcEEEeeCCCCccHHHHHHhCCCCcCCeEEEChhHHHHH----H
Confidence 99999999999998 89999999886 6788888889999986422 22222 223466666666 2
Q ss_pred Hc-cccccCCHHHHHhcc---CeEEEEEECCeEEEEEEEe
Q 007903 471 ES-GALVRRTDEELLKAL---DSFYVVEREGQIIACAALF 506 (585)
Q Consensus 471 ~~-~~~~~~~~e~l~~~i---~~~~Va~~dg~IVG~~~l~ 506 (585)
.. ..+++.....++..| +.+.+...+|+.+|.+...
T Consensus 287 ~~g~sLl~~Gi~~v~g~F~~gd~v~i~~~~~~~ia~g~~~ 326 (363)
T TIGR01027 287 ERGKSLLPAGIVGVEGNFSRGEVVEILNPEGQDIGRGLVN 326 (363)
T ss_pred hcCCccCCccceeeECcccCCCEEEEECCCCCEEEEEEec
Confidence 22 234555556666666 5677777889999998876
|
Bacterial ProB proteins hit the full length of this model, but the ProB-like domain of delta 1-pyrroline-5-carboxylate synthetase does not hit the C-terminal 100 residues of this model. The noise cutoff is set low enough to hit delta 1-pyrroline-5-carboxylate synthetase and other partial matches to this family. |
| >cd04242 AAK_G5K_ProB AAK_G5K_ProB: Glutamate-5-kinase (G5K) catalyzes glutamate-dependent ATP cleavage; G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, in the first and controlling step of proline (and, in mammals, ornithine) biosynthesis | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-27 Score=242.79 Aligned_cols=233 Identities=21% Similarity=0.275 Sum_probs=168.2
Q ss_pred eEEEEeCCccCCCCC-------hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHHHH
Q 007903 101 TFVVIISGEIVSSPY-------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAME 173 (585)
Q Consensus 101 ~iVIKlGGs~l~~~~-------l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~~~ 173 (585)
++|||+||+++++++ +.+++++|+.+++.|+++||||||+...+ ...+++..++ ......+ +.+
T Consensus 1 ~iViK~GGs~i~~~~~~~~~~~i~~~~~~i~~~~~~~~~viiV~sg~~~~g--~~~~~~~~~~------~~~~~~~-~~~ 71 (251)
T cd04242 1 RIVVKVGSSLLTDEDGGLDLGRLASLVEQIAELRNQGKEVILVSSGAVAAG--RQRLGLEKRP------KTLPEKQ-ALA 71 (251)
T ss_pred CEEEEeCCCeeeCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEecCchhhC--hhhhccCcCC------CchhHHH-HHH
Confidence 589999999999864 78899999999999999999998643322 3344443221 1112223 345
Q ss_pred HHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEec-HHHHHHHHcCCC
Q 007903 174 AAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVD-VTRMRERLDGGC 252 (585)
Q Consensus 174 ~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~-~~~I~~lL~~G~ 252 (585)
+.||.. ++..|.. .|+++|++ +.++...+.+|..++. ..+ .+.|+.||+.|+
T Consensus 72 ~~Gq~~--l~~~~~~-----~l~~~Gi~----~~q~l~t~~~~~~~~~----------------~~~~~~~i~~ll~~g~ 124 (251)
T cd04242 72 AVGQSL--LMALYEQ-----LFAQYGIK----VAQILLTRDDFEDRKR----------------YLNARNTLETLLELGV 124 (251)
T ss_pred HHhHHH--HHHHHHH-----HHHHcCCe----EEEEEEehhHhcchHH----------------HHHHHHHHHHHHHCCC
Confidence 677743 6655532 78999987 3343333333322110 112 588999999999
Q ss_pred eEEEcCC-ccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC-------CCCccccccc--HHHHHHHHHhhchh
Q 007903 253 LVILSNL-GYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLT--LQEADSLIRQRVKQ 322 (585)
Q Consensus 253 IPVi~~v-~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~-------~~~~lI~~it--~~e~~~li~~~~~~ 322 (585)
|||+++. .+. .+++.++|+|.+|++||.+|+||+|+|+|||||++ |++++|++++ .+|+.++...
T Consensus 125 iPVv~~~d~v~-~~~~~~~~~D~~A~~lA~~l~Ad~liilTDVdGvy~~dP~~~~~a~~i~~i~~~~~e~~~~~~~---- 199 (251)
T cd04242 125 IPIINENDTVA-TEEIRFGDNDRLSALVAGLVNADLLILLSDVDGLYDKNPRENPDAKLIPEVEEITDEIEAMAGG---- 199 (251)
T ss_pred EEEEcCCCCee-eeccccCChHHHHHHHHHHcCCCEEEEecCcCEEEeCCCCCCCCCeEEEEecCChHHHHHHhcc----
Confidence 9999962 222 12456789999999999999999999999999983 3589999999 7777666311
Q ss_pred hhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccCcHH
Q 007903 323 SEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLS 402 (585)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~~ 402 (585)
.++.+++| | |.+
T Consensus 200 ----------------------------------------------~~~~~~tg-g---------------------m~~ 211 (251)
T cd04242 200 ----------------------------------------------SGSSVGTG-G---------------------MRT 211 (251)
T ss_pred ----------------------------------------------cCcCcccC-C---------------------cHH
Confidence 11223455 5 899
Q ss_pred HHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeec
Q 007903 403 ELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (585)
Q Consensus 403 kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~ 444 (585)
||++|..|.+.|++ ++|+||..++. |.++|.+++.||+|.
T Consensus 212 Kl~a~~~a~~~gi~-v~I~~g~~~~~-i~~~l~g~~~GT~i~ 251 (251)
T cd04242 212 KLKAARIATEAGIP-VVIANGRKPDV-LLDILAGEAVGTLFL 251 (251)
T ss_pred HHHHHHHHHHCCCc-EEEEcCCCCCH-HHHHHcCCCCCeEeC
Confidence 99999999999998 99999999986 778888889999973
|
G5K is subject to feedback allosteric inhibition by proline or ornithine. In microorganisms and plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia. Microbial G5K generally consists of two domains: a catalytic G5K domain and one PUA (pseudo uridine synthases and archaeosine-specific transglycosylases) domain, and some lack the PUA domain. G5K requires free Mg for activity, it is tetrameric, and it aggregates to higher forms in a proline-dependent way. G5K lacking the PUA domain remains tetrameric, active, and proline-inhibitable, but the Mg requir |
| >PTZ00489 glutamate 5-kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-27 Score=241.79 Aligned_cols=234 Identities=15% Similarity=0.191 Sum_probs=168.6
Q ss_pred CCeEEEEeCCccCCCCC------hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHHH
Q 007903 99 GGTFVVIISGEIVSSPY------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAM 172 (585)
Q Consensus 99 ~k~iVIKlGGs~l~~~~------l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~~ 172 (585)
.+++|||+|||+++++. +..++++|+.|++ ++++||||||+...+ ...+++...+ -.-..++
T Consensus 8 ~~riVIKlG~Svit~~~~~~~~~~~~l~~~i~~l~~-~~~vilVssGava~g--~~~~~~~~~~---------~~~~qa~ 75 (264)
T PTZ00489 8 VKRIVVKVGSSILVDNQEIAAHRIEALCRFIADLQT-KYEVILVTSGAVAAG--YTKKEMDKSY---------VPNKQAL 75 (264)
T ss_pred CCEEEEEeccceeeCCCCcCHHHHHHHHHHHHHHhc-CCeEEEEecChHhcC--hhhcCCCccc---------cHHHHHH
Confidence 48899999999998754 6889999999986 799999998874333 3345544211 1123456
Q ss_pred HHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEec-HHHHHHHHcCC
Q 007903 173 EAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVD-VTRMRERLDGG 251 (585)
Q Consensus 173 ~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~-~~~I~~lL~~G 251 (585)
+++||.. |+..|. ..|.++|+. +.++.++..| +. .+.+..+ .+.|++||+.|
T Consensus 76 aaiGq~~--L~~~y~-----~~f~~~~~~--~aqiLlt~~d----------------~~--~~~~~~n~~~~l~~lL~~g 128 (264)
T PTZ00489 76 ASMGQPL--LMHMYY-----TELQKHGIL--CAQMLLAAYD----------------LD--SRKRTINAHNTIEVLISHK 128 (264)
T ss_pred HHhCHHH--HHHHHH-----HHHHhCCCe--EEEeeeeccc----------------cc--cchhhHHHHHHHHHHHHCC
Confidence 7889965 777764 378999987 2333333322 11 1112233 69999999999
Q ss_pred CeEEEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC---C----CCcc---cccccHHHHHHHHHhhch
Q 007903 252 CLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD---E----SGHL---IRFLTLQEADSLIRQRVK 321 (585)
Q Consensus 252 ~IPVi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~---~----~~~l---I~~it~~e~~~li~~~~~ 321 (585)
+|||+++.......++.+.|+|.+|+.||.+++||+||++|||||++ | ++++ |++++.+++.... +
T Consensus 129 ~VPIinend~~~~~e~~~gdnD~lAa~lA~~l~Ad~LiilTDVdGVy~~dP~~~~~A~~~~~i~~i~~~~~~~~~--~-- 204 (264)
T PTZ00489 129 VIPIINENDATALHELVFGDNDRLSALVAHHFKADLLVILSDIDGYYTENPRTSTDAKIRSVVHELSPDDLVAEA--T-- 204 (264)
T ss_pred CEEEECCCCCcccceeEeCChHHHHHHHHHHhCCCEEEEeeccCeeEcCCCCCCCccceeeeeccCCHHHHHHhc--C--
Confidence 99999986544455788999999999999999999999999999983 2 3555 6677765542210 0
Q ss_pred hhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccCcH
Q 007903 322 QSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYL 401 (585)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~ 401 (585)
..+.+++| | |.
T Consensus 205 -----------------------------------------------~~~~~~tG-G---------------------M~ 215 (264)
T PTZ00489 205 -----------------------------------------------PNNRFATG-G---------------------IV 215 (264)
T ss_pred -----------------------------------------------cCCCcccC-C---------------------hH
Confidence 11223456 5 89
Q ss_pred HHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcC--CCceeeccc
Q 007903 402 SELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRD--GMGTMVASD 446 (585)
Q Consensus 402 ~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~--~~GT~i~~d 446 (585)
+||+||..|.+.|++ ++|++|..++. |.+++.++ ..||.|.+.
T Consensus 216 ~Kl~aa~~a~~~Gi~-v~I~~g~~~~~-i~~~l~g~~~~~GT~~~~~ 260 (264)
T PTZ00489 216 TKLQAAQFLLERGGK-MYLSSGFHLEK-ARDFLIGGSHEIGTLFYPR 260 (264)
T ss_pred HHHHHHHHHHHCCCC-EEEEeCCCchH-HHHHHcCCCCCCceEEeec
Confidence 999999999999997 89999999987 56776554 379999653
|
|
| >PRK12314 gamma-glutamyl kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-27 Score=242.46 Aligned_cols=236 Identities=20% Similarity=0.224 Sum_probs=168.6
Q ss_pred CCeEEEEeCCccCCCCC-------hHHHHHHHHHHHHCCCeEEEE-eCchHHHHHHHHHcCCcccccCCccCCCHHHHHH
Q 007903 99 GGTFVVIISGEIVSSPY-------LDPILKDIAFLHHLGIRFVLV-PGTHVQIDKLLSERGHEAKYLGRYRITDSESLAA 170 (585)
Q Consensus 99 ~k~iVIKlGGs~l~~~~-------l~~l~~~Ia~L~~~G~~vVlV-hGgg~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~ 170 (585)
++++|||+||+++++++ +.+++++|+.+++.|+++||| ||++.+.+..+. +.. +..+...++
T Consensus 9 ~~~iViK~Ggs~l~~~~~~~~~~~i~~~~~~I~~~~~~g~~vvlV~Sga~~~g~~~l~---~~~------~~~~~~~~~- 78 (266)
T PRK12314 9 AKRIVIKVGSSTLSYENGKINLERIEQLVFVISDLMNKGKEVILVSSGAIGAGLTKLK---LDK------RPTSLAEKQ- 78 (266)
T ss_pred CCEEEEEeCCCeeeCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEeeCcccccceeec---ccc------CCCCHHHHH-
Confidence 57999999999999542 799999999999999999987 766666554442 221 111223333
Q ss_pred HHHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHHcC
Q 007903 171 AMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDG 250 (585)
Q Consensus 171 ~~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL~~ 250 (585)
+.++.||.. ++..|.. .|+++|++ ..++-++.. .|-. .+......+.|+.||+.
T Consensus 79 a~aa~Gq~~--l~~~~~~-----~~~~~g~~--~~q~llT~~--~~~~---------------~~~~~~~~~~l~~ll~~ 132 (266)
T PRK12314 79 ALAAVGQPE--LMSLYSK-----FFAEYGIV--VAQILLTRD--DFDS---------------PKSRANVKNTFESLLEL 132 (266)
T ss_pred HHHHHhHHH--HHHHHHH-----HHHHcCCe--EEEEEEecc--cccc---------------hHHHHHHHHHHHHHHHC
Confidence 346788854 7777753 89999986 223322221 1211 11122346899999999
Q ss_pred CCeEEEcC---CccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC-------CCCcccccccH--HHHHHHHHh
Q 007903 251 GCLVILSN---LGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTL--QEADSLIRQ 318 (585)
Q Consensus 251 G~IPVi~~---v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~-------~~~~lI~~it~--~e~~~li~~ 318 (585)
|+|||+++ ++.++.|. .++|+|++|++||.+|+||+|+|+|||||++ |++++|++|+. .+..++..
T Consensus 133 g~IPVv~~nd~v~~~~~~~-~~~~~D~~Aa~lA~~l~Ad~liilTDVdGVy~~dP~~~~~a~~i~~I~~~~~~~~~~~~- 210 (266)
T PRK12314 133 GILPIVNENDAVATDEIDT-KFGDNDRLSAIVAKLVKADLLIILSDIDGLYDKNPRINPDAKLRSEVTEITEEILALAG- 210 (266)
T ss_pred CCEEEEcCCCCeeeccccc-eecchHHHHHHHHHHhCCCEEEEEeCCCcccCCCCCCCCCCeEEEEecCCCHHHHHHhc-
Confidence 99999994 44454443 4668999999999999999999999999983 35888888863 22222210
Q ss_pred hchhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCccccccccccccccccccc
Q 007903 319 RVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLN 398 (585)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~ 398 (585)
..++.+++| |
T Consensus 211 -------------------------------------------------~~~~~~~tG-G-------------------- 220 (266)
T PRK12314 211 -------------------------------------------------GAGSKFGTG-G-------------------- 220 (266)
T ss_pred -------------------------------------------------cCCCCcccC-c--------------------
Confidence 012234456 5
Q ss_pred CcHHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeecc
Q 007903 399 GYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (585)
Q Consensus 399 ~m~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~~ 445 (585)
|.+|++||..|.+.|++ ++|++|..++. |.+++.+++.||+|.+
T Consensus 221 -M~~Kl~aa~~a~~~gv~-v~I~~g~~~~~-i~~~l~g~~~GT~i~~ 264 (266)
T PRK12314 221 -MVTKLKAAKFLMEAGIK-MVLANGFNPSD-ILDFLEGESIGTLFAP 264 (266)
T ss_pred -hHHHHHHHHHHHHCCCe-EEEEcCCCchH-HHHHHcCCCCceEEcc
Confidence 89999999999999998 99999999998 6788888889999965
|
|
| >cd04261 AAK_AKii-LysC-BS AAK_AKii-LysC-BS: Amino Acid Kinase Superfamily (AAK), AKii; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis 168, and the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, and related sequences | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-26 Score=231.86 Aligned_cols=189 Identities=19% Similarity=0.233 Sum_probs=152.6
Q ss_pred eEEEEeCCccCCCCC-hHHHHHHHHHHHHCCCeEEEEeCc-hHHHHHHHHHcCCcccccCCccCCCHHHHHHHHHHHh-H
Q 007903 101 TFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGT-HVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAG-G 177 (585)
Q Consensus 101 ~iVIKlGGs~l~~~~-l~~l~~~Ia~L~~~G~~vVlVhGg-g~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~~~~~G-~ 177 (585)
.+|||+||+++.+++ ++.++++|+.+.+.|+++|||||| |..++++++...... +.++...++++. +.| .
T Consensus 1 ~iViK~GGs~l~~~~~~~~~~~~i~~l~~~g~~~vvV~sg~g~~~~~l~~~~~~~~------~~~~~~~~~~i~-a~Ge~ 73 (239)
T cd04261 1 LIVQKFGGTSVASIERIKRVAERIKKRKKKGNQVVVVVSAMGGTTDELIELAKEIS------PRPPARELDVLL-STGEQ 73 (239)
T ss_pred CEEEEECCcccCCHHHHHHHHHHHHHHHHcCCCEEEEECCCCchhHHHHHHHHHhc------cCCCHHHHHHHH-HHHHH
Confidence 489999999998865 899999999999999999999997 667777665421111 346777777753 445 4
Q ss_pred HHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHHcCCCeEEEc
Q 007903 178 IRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILS 257 (585)
Q Consensus 178 i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL~~G~IPVi~ 257 (585)
++..+... .|+++|++ ++++++.+..++++. +|+ .|++..++.+.|+.+++.|+|||++
T Consensus 74 ~~~~l~~~--------~l~~~g~~----a~~l~~~~~~l~~~~--------~~~-~~~i~~~~~~~l~~ll~~~~ipVi~ 132 (239)
T cd04261 74 VSIALLAM--------ALNRLGIK----AISLTGWQAGILTDG--------HHG-KARIIDIDPDRIRELLEEGDVVIVA 132 (239)
T ss_pred HHHHHHHH--------HHHhCCCC----eEEechhhCCEEecC--------CCC-cceechhhHHHHHHHHHcCCeEEEc
Confidence 55554332 57899987 789999887776654 232 5778888999999999999999999
Q ss_pred CC-ccCCCCceeee---ChHHHHHHHHHHcCCCEEEEeecccccC---C----CCcccccccHHHHHHHHH
Q 007903 258 NL-GYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPILD---E----SGHLIRFLTLQEADSLIR 317 (585)
Q Consensus 258 ~v-~~~~~G~~~ni---d~D~lAa~lA~~L~AdkLIilTDV~gl~---~----~~~lI~~it~~e~~~li~ 317 (585)
++ +.+.+|+++++ |+|.+|+.+|.+|+||+|+++|||||++ | ++++|++++.+|++++..
T Consensus 133 G~~~~~~~g~~~~l~rg~sD~~A~~lA~~l~A~~lii~tdV~GVy~~dP~~~~~a~~i~~i~~~ea~~l~~ 203 (239)
T cd04261 133 GFQGINEDGDITTLGRGGSDTSAVALAAALGADRCEIYTDVDGVYTADPRIVPKARKLDEISYDEMLEMAS 203 (239)
T ss_pred CccccCCCCCEEecCCCChHHHHHHHHHHcCCCEEEEEeCCCCCCCCCCCCCCCceEccccCHHHHHHHHh
Confidence 97 78889999999 9999999999999999999999999983 3 689999999999888753
|
In B. subtilis 168, the regulation of the diaminopimelate (Dap)-lysine biosynthetic pathway involves dual control by Dap and lysine, effected through separate Dap- and lysine-sensitive aspartokinase isoenzymes. The B. subtilis 168 AKII is induced by methionine, and repressed and inhibited by lysine. Although Corynebacterium glutamicum is known to contain a single aspartokinase isoenzyme type, both the succinylase and dehydrogenase variant pathways of DAP-lysine synthesis operate simultaneously in this organism. In this organism and other various Gram-positive bacteria, the DAP-lysine pathway is feedback regulated by the concerted action of lysine and |
| >cd04260 AAK_AKi-DapG-BS AAK_AKi-DapG-BS: Amino Acid Kinase Superfamily (AAK), AKi-DapG; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the diaminopimelate-sensitive aspartokinase isoenzyme AKI (DapG), a monofunctional class enzyme found in Bacilli (Bacillus subtilis 168), Clostridia, and Actinobacteria bacterial species | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.5e-26 Score=232.20 Aligned_cols=190 Identities=18% Similarity=0.227 Sum_probs=157.7
Q ss_pred eEEEEeCCccCCCCC-hHHHHHHHHHHHHCCCeEEEEe-----CchHHHHHHHHHcCCcccccCCccCCCHHHHHHHHHH
Q 007903 101 TFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVP-----GTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEA 174 (585)
Q Consensus 101 ~iVIKlGGs~l~~~~-l~~l~~~Ia~L~~~G~~vVlVh-----Ggg~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~~~~ 174 (585)
.+|||+||+++++++ +++++++|+.+.+.|+++|||| |||+++++.+..++.. .+.|+|. ++++.+ .+
T Consensus 1 ~~ViK~GGs~l~~~~~~~~~~~~I~~~~~~g~~~vvV~sa~g~~G~~~~~~~l~~~~~~----~~~~~t~-~~~~~~-~~ 74 (244)
T cd04260 1 IIVQKFGGTSVSTKERREQVAKKVKQAVDEGYKPVVVVSAMGRKGDPYATDTLINLVYA----ENSDISP-RELDLL-MS 74 (244)
T ss_pred CEEEEECchhcCCHHHHHHHHHHHHHHHHCCCCeEEEEECCCCCCCchHHHHHHHHHHh----hcCCCCH-HHHHHH-HH
Confidence 379999999999876 7999999999999999988887 7888888876665432 2456655 467665 56
Q ss_pred HhHHHHH--HHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHHcCCC
Q 007903 175 AGGIRMM--IEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGC 252 (585)
Q Consensus 175 ~G~i~~~--L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL~~G~ 252 (585)
.|+++.. +++ .|+++|++ ++++++.|..++++.. |+ .|++..++.+.|+.+|+.|+
T Consensus 75 ~Ge~~~~~~~~~---------~l~~~Gi~----a~~l~~~~~~lit~~~--------~~-~~~v~~~~~~~l~~ll~~g~ 132 (244)
T cd04260 75 CGEIISAVVLTS---------TLRAQGLK----AVALTGAQAGILTDDN--------YS-NAKIIKVNPKKILSALKEGD 132 (244)
T ss_pred HhHHHHHHHHHH---------HHHhCCCC----eEEechHHcCEEecCC--------CC-ceeeeccCHHHHHHHHhCCC
Confidence 8887754 444 56899988 8999999988877542 33 47788899999999999999
Q ss_pred eEEEcCC-ccCCCCceeee---ChHHHHHHHHHHcCCCEEEEeecccccC-------CCCcccccccHHHHHHHHHh
Q 007903 253 LVILSNL-GYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQ 318 (585)
Q Consensus 253 IPVi~~v-~~~~~G~~~ni---d~D~lAa~lA~~L~AdkLIilTDV~gl~-------~~~~lI~~it~~e~~~li~~ 318 (585)
|||++++ +.+.+|+++|+ ++|.+|+.||.+|+||+|+++|||||++ +++++|++|+.+|+++++..
T Consensus 133 VPVv~g~~~~~~~g~~~~l~rg~sD~~A~~lA~~l~A~~l~~~tDV~GVy~~dP~~~~~a~~i~~i~~~e~~~l~~~ 209 (244)
T cd04260 133 VVVVAGFQGVTEDGEVTTLGRGGSDTTAAALGAALNAEYVEIYTDVDGIMTADPRVVPNARILDVVSYNEVFQMAHQ 209 (244)
T ss_pred EEEecCCcccCCCCCEEEeCCCchHHHHHHHHHHcCCCEEEEEECCCcCCcCCCCCCCCCeEcccCCHHHHHHHHHc
Confidence 9999996 88889999999 5999999999999999999999999983 36899999999999998754
|
In Bacillus subtilis, the regulation of the diaminopimelate-lysine biosynthetic pathway involves dual control by diaminopimelate and lysine, effected through separate diaminopimelate- and lysine-sensitive aspartokinase isoenzymes. AKI activity is invariant during the exponential and stationary phases of growth and is not altered by addition of amino acids to the growth medium. The role of this isoenzyme is most likely to provide a constant level of aspartyl-beta-phosphate for the biosynthesis of diaminopimelate for peptidoglycan synthesis and dipicolinate during sporulation. The B. subtilis AKI is tetrameric consisting of two alpha and two bet |
| >cd04246 AAK_AK-DapG-like AAK_AK-DapG-like: Amino Acid Kinase Superfamily (AAK), AK-DapG-like; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the diaminopimelate-sensitive aspartokinase isoenzyme AKI (DapG), a monofunctional enzymes found in Bacilli (Bacillus subtilis 168), Clostridia, and Actinobacteria bacterial species, as well as, the catalytic AK domain of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis 168, the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, and related isoenzymes | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.7e-26 Score=230.26 Aligned_cols=189 Identities=18% Similarity=0.225 Sum_probs=154.4
Q ss_pred eEEEEeCCccCCCCC-hHHHHHHHHHHHHCCCeEEEEeC-chHHHHHHHHHcCCcccccCCccCCCHHHHHHHHHHHhH-
Q 007903 101 TFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPG-THVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGG- 177 (585)
Q Consensus 101 ~iVIKlGGs~l~~~~-l~~l~~~Ia~L~~~G~~vVlVhG-gg~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~~~~~G~- 177 (585)
.+|||+||+++.++. ++.++++|+.+++.|+++||||| +|+.++.+++..+....+ .+.+.++++ .+.|+
T Consensus 1 ~iViK~GGs~l~~~~~~~~~~~~i~~l~~~g~~~viV~sg~g~~~~~ll~~~~~~~~~------~~~~~~~~i-~~~Ge~ 73 (239)
T cd04246 1 IIVQKFGGTSVADIERIKRVAERIKKAVKKGYQVVVVVSAMGGTTDELIGLAKEVSPR------PSPRELDML-LSTGEQ 73 (239)
T ss_pred CEEEEECccccCCHHHHHHHHHHHHHHHHcCCCEEEEECCCCchHHHHHHHHHHhccC------CCHHHHHHH-HHHhHH
Confidence 379999999998865 89999999999999999999998 588889888877665432 256677765 34565
Q ss_pred HHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHHcCCCeEEEc
Q 007903 178 IRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILS 257 (585)
Q Consensus 178 i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL~~G~IPVi~ 257 (585)
++..+... .|+++|++ ++++++.+..++++.+ |+ .|++..++.+.|++++++|.|||++
T Consensus 74 ~~~~~~~~--------~l~~~g~~----a~~l~~~~~~l~~~~~--------~~-~~~~~~~~~~~l~~ll~~g~ipVi~ 132 (239)
T cd04246 74 ISAALLAM--------ALNRLGIK----AISLTGWQAGILTDDH--------HG-NARIIDIDPKRILEALEEGDVVVVA 132 (239)
T ss_pred HHHHHHHH--------HHHhCCCC----eEEeccccCCEEecCC--------CC-ceeechhhHHHHHHHHhcCCEEEEc
Confidence 45443322 57899987 7889888877776542 22 4778888999999999999999999
Q ss_pred CC-ccCCCCceeee---ChHHHHHHHHHHcCCCEEEEeecccccC-------CCCcccccccHHHHHHHHH
Q 007903 258 NL-GYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIR 317 (585)
Q Consensus 258 ~v-~~~~~G~~~ni---d~D~lAa~lA~~L~AdkLIilTDV~gl~-------~~~~lI~~it~~e~~~li~ 317 (585)
+. +.+.+|+++++ |+|.+|+.+|.+|+||+|+++|||||++ +++++|++++.+|+++++.
T Consensus 133 g~~~~~~~g~~~~l~~g~~D~~A~~lA~~l~A~~li~~tdV~GVy~~dP~~~~~a~~i~~l~~~e~~~l~~ 203 (239)
T cd04246 133 GFQGVNEDGEITTLGRGGSDTTAVALAAALKADRCEIYTDVDGVYTADPRIVPKARKLDVISYDEMLEMAS 203 (239)
T ss_pred CccccCCCCCEEecCCCChHHHHHHHHHHcCCCEEEEEECCCCCCCCCCCCCCCCeEcccCCHHHHHHHHh
Confidence 86 77888999999 8999999999999999999999999983 3689999999999888753
|
In Bacillus subtilis, the regulation of the diaminopimelate-lysine biosynthetic pathway involves dual control by diaminopimelate and lysine, effected through separate diaminopimelate- and lysine-sensitive aspartokinase isoenzymes. The role of the AKI isoenzyme is most likely to provide a constant level of aspartyl-beta-phosphate for the biosynthesis of diaminopimelate for peptidoglycan synthesis and dipicolinate during sporulati |
| >KOG1154 consensus Gamma-glutamyl kinase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.4e-27 Score=226.17 Aligned_cols=245 Identities=20% Similarity=0.218 Sum_probs=179.6
Q ss_pred CCeEEEEeCCccCCCCC--------hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCH---HH
Q 007903 99 GGTFVVIISGEIVSSPY--------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDS---ES 167 (585)
Q Consensus 99 ~k~iVIKlGGs~l~~~~--------l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rvt~~---~~ 167 (585)
-++||||+|+++++++. +..++++++.|+..|++++||++|+.+.+.. ++..+.....-.|-|-. +.
T Consensus 9 a~rIVVKLGSavit~e~~~~laLgrla~IVEqV~~L~~~G~evilVSSGaVA~G~q--rLr~~~~~s~s~r~~l~~~~~l 86 (285)
T KOG1154|consen 9 AYRIVVKLGSAVITREDTCGLALGRLASIVEQVSELQRMGREVILVSSGAVAFGRQ--RLRQELLPSSSMRQTLKPQSEL 86 (285)
T ss_pred ceEEEEEecceEEECCCCccchHHHHHHHHHHHHHHHhcCceEEEEecchhhhhHH--HhhhhhccchhHHHhhCCccch
Confidence 37999999999999865 5789999999999999999999998776654 33333221111121111 23
Q ss_pred HHH-HHHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEec-HHHHH
Q 007903 168 LAA-AMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVD-VTRMR 245 (585)
Q Consensus 168 l~~-~~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~-~~~I~ 245 (585)
.+. +++++||-+ |++.|.. +|.++|+. ++++-++-.| |..-. .+.| .++|.
T Consensus 87 ~e~rA~AAvGQ~~--Lmalye~-----lF~Qy~~~--iAQvLvT~~D--i~d~~----------------~r~Nl~~Ti~ 139 (285)
T KOG1154|consen 87 AEKRACAAVGQSG--LMALYET-----LFTQYGIT--IAQVLVTRND--ILDEQ----------------QRKNLQNTIS 139 (285)
T ss_pred hhHHHHHHhCcch--HHHHHHH-----HHHHhccc--hheeeecCcc--hhhHH----------------HHHHHHHHHH
Confidence 333 578899977 8888864 89999987 4555544433 22111 1235 48999
Q ss_pred HHHcCCCeEEEcCC-ccCCCCceeeeC---hHHHHHHHHHHcCCCEEEEeecccccC---CCC---cccccccHHHHHHH
Q 007903 246 ERLDGGCLVILSNL-GYSSSGEVLNCN---TYEVATACALAIEADKLICIIDGPILD---ESG---HLIRFLTLQEADSL 315 (585)
Q Consensus 246 ~lL~~G~IPVi~~v-~~~~~G~~~nid---~D~lAa~lA~~L~AdkLIilTDV~gl~---~~~---~lI~~it~~e~~~l 315 (585)
+||..|.|||+|.. +++.. ++.+.| +|.+|+.+|..++||.||+||||+|++ |+. ++|+..+..+
T Consensus 140 eLL~m~viPIvNeNDavs~~-~~~~~D~~dNDsLsA~laaei~ADlLilLsDVdglYt~PPd~~~~~li~~~~~~~---- 214 (285)
T KOG1154|consen 140 ELLSMNVIPIVNENDAVSPR-EIPFGDSSDNDSLAAILAAEIKADLLILLSDVDGLYTGPPDADPSKLIHTFSPGD---- 214 (285)
T ss_pred HHHhCCceeeecCCCccCCc-ccccCCCCcccHHHHHHHHHhccCEEEEEecccccccCCCCCCcceeeeeeccCC----
Confidence 99999999999953 44432 344555 999999999999999999999999995 333 3333332211
Q ss_pred HHhhchhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccc
Q 007903 316 IRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLS 395 (585)
Q Consensus 316 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~ 395 (585)
..-..+|+.+|.+|+| |
T Consensus 215 ---------------------------------------------~~v~~tfG~~SkvGtG-G----------------- 231 (285)
T KOG1154|consen 215 ---------------------------------------------PQVSTTFGSKSKVGTG-G----------------- 231 (285)
T ss_pred ---------------------------------------------CCCccccCccCccCcC-c-----------------
Confidence 0113568999999999 7
Q ss_pred cccCcHHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeeccc
Q 007903 396 RLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446 (585)
Q Consensus 396 ~~~~m~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~~d 446 (585)
|.+|+.||..|..+||. |.|++|..+.. +..++.+...||.|...
T Consensus 232 ----M~tKv~AA~~A~~~Gv~-viI~~g~~p~~-I~~iv~g~kvgt~f~~~ 276 (285)
T KOG1154|consen 232 ----METKVKAAVNALNAGVS-VIITNGDAPEN-ITDIVEGKKVGTFFEQL 276 (285)
T ss_pred ----chhhHHHHHHHhcCCce-EEEeCCCChHH-HHHHHhhhhhhhhhhhc
Confidence 89999999999999998 99999999987 78888888899998654
|
|
| >COG1608 Predicted archaeal kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-25 Score=218.50 Aligned_cols=236 Identities=17% Similarity=0.206 Sum_probs=171.8
Q ss_pred EEEEeCCccCCCCC---------hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHHH
Q 007903 102 FVVIISGEIVSSPY---------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAM 172 (585)
Q Consensus 102 iVIKlGGs~l~~~~---------l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~~ 172 (585)
+|+|||||+||+++ +++++.+|+. ..=.++|||||||+|.|...++++++ ...+ +.++.....+.
T Consensus 3 ~IlKlGGSvITdK~~p~t~r~~~l~ria~eI~~--~~~~~livVHGgGSFGHp~Ak~~~~~-~~~~---~~s~~G~~~~~ 76 (252)
T COG1608 3 IILKLGGSVITDKDKPRTVREDRLRRIAREISN--GKPEKLIVVHGGGSFGHPAAKEFGLE-GLKN---YLSPLGFSLTH 76 (252)
T ss_pred EEEEecceeeecCCCcchhhHHHHHHHHHHHhc--CCcccEEEEecCccccCHHHHHhCcc-cccc---ccCccchHHHH
Confidence 89999999999976 3455555553 22347899999999999999999993 2111 22334444556
Q ss_pred HHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHHcCCC
Q 007903 173 EAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGC 252 (585)
Q Consensus 173 ~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL~~G~ 252 (585)
.++-++|..+++.| .+.|+. ++...+.+ +.+ +.|++..-..+.|+.+|+.|+
T Consensus 77 ~am~~L~~~V~~~l---------~~~Gv~----av~~~P~s--~~~-------------~~gr~~~~~l~~i~~~l~~gf 128 (252)
T COG1608 77 LAMLELNSIVVDAL---------LDAGVR----AVSVVPIS--FST-------------FNGRILYTYLEAIKDALEKGF 128 (252)
T ss_pred HHHHHHHHHHHHHH---------HhcCCc----cccccCcc--eee-------------cCCceeechHHHHHHHHHcCC
Confidence 67888898888864 678876 44333332 111 235555556899999999999
Q ss_pred eEEEcC-CccCCCCceeeeChHHHHHHHHHHcCCCEEEEeeccccc-CCCCcccccc-cHHHHHHHHHhhchhhhHHHHH
Q 007903 253 LVILSN-LGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPIL-DESGHLIRFL-TLQEADSLIRQRVKQSEIAANY 329 (585)
Q Consensus 253 IPVi~~-v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl-~~~~~lI~~i-t~~e~~~li~~~~~~~~~~~~~ 329 (585)
|||+.+ +.++++..+..+++|+++.+||..|+||+++|+|||||+ +.+++.++.+ ..++++....-+
T Consensus 129 vPvl~GDVv~d~~~g~~IiSGDdIv~~LA~~l~pd~v~f~tdVdGVy~~~p~~~p~~~~l~~i~~~~~~~---------- 198 (252)
T COG1608 129 VPVLYGDVVPDDDNGYEIISGDDIVLHLAKELKPDRVIFLTDVDGVYDRDPGKVPDARLLSEIEGRVALG---------- 198 (252)
T ss_pred EeeeecceEEcCCCceEEEeccHHHHHHHHHhCCCEEEEEecCCceecCCCCcCccccchhhhhhhhhhc----------
Confidence 999997 456666578899999999999999999999999999998 3444433333 344554432111
Q ss_pred HhhhhcccccccCCCCCCCc-ccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccCcHHHHHHHH
Q 007903 330 VKAVAEEDITCFGHSDSIGS-VYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAA 408 (585)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~~kl~aa~ 408 (585)
++.++ +| | | |..||+++.
T Consensus 199 ---------------gs~~~DVT------------------------G-G---------------------i~~Kl~~~~ 217 (252)
T COG1608 199 ---------------GSGGTDVT------------------------G-G---------------------IAKKLEALL 217 (252)
T ss_pred ---------------CcCcccch------------------------h-h---------------------HHHHHHHHH
Confidence 11112 44 5 6 899999999
Q ss_pred HHHHcCCCeEEEecCccchhhHHHHHhcCCCceeec
Q 007903 409 FVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (585)
Q Consensus 409 ~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~ 444 (585)
...+.|.. |+|+||..++. |.+++.++.+||.|.
T Consensus 218 ~~~~~~~~-vyi~ng~~~~n-i~~~l~G~~vGT~I~ 251 (252)
T COG1608 218 EIARYGKE-VYIFNGNKPEN-IYRALRGENVGTRID 251 (252)
T ss_pred HHHhcCce-EEEECCCCHHH-HHHHhcCCCCceEec
Confidence 99999988 99999999998 567778999999985
|
|
| >TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.3e-24 Score=247.19 Aligned_cols=251 Identities=18% Similarity=0.164 Sum_probs=171.5
Q ss_pred CCeEEEEeCCccCCCCC-------hHHHHHHHHHHHHCCCeEEEE-eCchHHHHHHHHHcCCccc-ccCCccCCCHHHHH
Q 007903 99 GGTFVVIISGEIVSSPY-------LDPILKDIAFLHHLGIRFVLV-PGTHVQIDKLLSERGHEAK-YLGRYRITDSESLA 169 (585)
Q Consensus 99 ~k~iVIKlGGs~l~~~~-------l~~l~~~Ia~L~~~G~~vVlV-hGgg~~i~~~l~~~g~~~~-~~~g~rvt~~~~l~ 169 (585)
.++||||+||++|++++ +..++++|+.|++.|+++||| ||++.+.+..+...+.... +.+-.+..+...++
T Consensus 7 ~~~iViKiGss~lt~~~~~~~~~~l~~l~~~i~~l~~~g~~vilVsSGA~a~G~~~~~~~~~~~~~~~~~~~~~~~~~~q 86 (715)
T TIGR01092 7 VKRIVVKVGTAVVTRGDGRLALGRLGSICEQLSELNSDGREVILVTSGAVAFGRQRLRHRILVNSSFADLQKPQPELDGK 86 (715)
T ss_pred CCEEEEEeCcceeECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEccchHHhchHHhccchhccccccccCCCCchHHHH
Confidence 48999999999999864 789999999999999999995 5455444444433222110 00001122222222
Q ss_pred HHHHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHHc
Q 007903 170 AAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLD 249 (585)
Q Consensus 170 ~~~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL~ 249 (585)
+.++.||.. |++.|++ .|.++++. +.++-++-. ||... +......+.|+.||+
T Consensus 87 -a~aa~gq~~--L~~~y~~-----~f~~~~i~--~aQ~Llt~~----------------d~~~~-~~~~~~~~~l~~lL~ 139 (715)
T TIGR01092 87 -ACAAVGQSG--LMALYET-----MFTQLDIT--AAQILVTDL----------------DFRDE-QFRRQLNETVHELLR 139 (715)
T ss_pred -HHHHHHHHH--HHHHHHH-----HHHHcCCe--eEEEEechh----------------hcccH-HHHHHHHHHHHHHHH
Confidence 345677764 7888764 78888876 223322211 11100 011224689999999
Q ss_pred CCCeEEEcC-CccCCC------CceeeeChHHHHHHHHHHcCCCEEEEeecccccC------CCCcccccccHHHHHHHH
Q 007903 250 GGCLVILSN-LGYSSS------GEVLNCNTYEVATACALAIEADKLICIIDGPILD------ESGHLIRFLTLQEADSLI 316 (585)
Q Consensus 250 ~G~IPVi~~-v~~~~~------G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~------~~~~lI~~it~~e~~~li 316 (585)
.|+|||+++ ..+... ++-+++|+|.+|++||.+|+||+|+++|||||++ +++++|++++..+.+..+
T Consensus 140 ~g~iPVin~nD~V~~~~~~~~~~~g~~~d~D~lAa~lA~~l~Ad~LiilTDVdGVy~~dP~~~~a~~I~~i~~~~~~~~i 219 (715)
T TIGR01092 140 MNVVPVVNENDAVSTRAAPYSDSQGIFWDNDSLAALLALELKADLLILLSDVEGLYDGPPSDDDSKLIDTFYKEKHQGEI 219 (715)
T ss_pred CCCEEEEcCCCcccccccccccccceecchHHHHHHHHHHcCCCEEEEEeCCCeeeCCCCCCCCCeEeeeecccchhhhh
Confidence 999999986 222211 1224999999999999999999999999999983 358999999865443222
Q ss_pred HhhchhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCccccccccccccccccc
Q 007903 317 RQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSR 396 (585)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~ 396 (585)
.. +..+..++| |
T Consensus 220 ~~-------------------------------------------------~~~~~~~tG-G------------------ 231 (715)
T TIGR01092 220 TF-------------------------------------------------GTKSRLGRG-G------------------ 231 (715)
T ss_pred cc-------------------------------------------------CcccccCCC-C------------------
Confidence 11 112223456 5
Q ss_pred ccCcHHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeecccccc
Q 007903 397 LNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYE 449 (585)
Q Consensus 397 ~~~m~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~~d~~~ 449 (585)
|.+||+||..|.+.|++ ++|++|..++. |.+++.++..||.|.++..+
T Consensus 232 ---M~~Kl~aa~~a~~~gi~-v~I~~g~~~~~-l~~~l~g~~~GT~~~~~~~~ 279 (715)
T TIGR01092 232 ---MTAKVKAAVWAAYGGTP-VIIASGTAPKN-ITKVVEGKKVGTLFHEDAHL 279 (715)
T ss_pred ---chHHHHHHHHHHHCCCe-EEEeCCCCcch-HHHHhcCCCCceEecccchh
Confidence 89999999999999998 99999999987 67888888899999877553
|
This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region. |
| >cd04234 AAK_AK AAK_AK: Amino Acid Kinase Superfamily (AAK), Aspartokinase (AK); this CD includes the N-terminal catalytic domain of aspartokinase (4-L-aspartate-4-phosphotransferase;) | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.4e-24 Score=214.37 Aligned_cols=176 Identities=20% Similarity=0.222 Sum_probs=142.0
Q ss_pred eEEEEeCCccCCCCC-hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHHHHHHhHH-
Q 007903 101 TFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGI- 178 (585)
Q Consensus 101 ~iVIKlGGs~l~~~~-l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~~~~~G~i- 178 (585)
++|||+||+++.+++ ++.++++|+.+ +.|+++||||||++.++..+..+. .+++.|+.
T Consensus 1 ~iViK~GGs~l~~~~~~~~~~~~i~~l-~~g~~vvvV~Sg~~~~t~~l~~~~-------------------~~~s~Ge~~ 60 (227)
T cd04234 1 MVVQKFGGTSVASAERIKRVADIIKAY-EKGNRVVVVVSAMGGVTDLLIELA-------------------LLLSFGERL 60 (227)
T ss_pred CEEEEECccccCCHHHHHHHHHHHHHh-hcCCCEEEEEcCCCcccHHHHHHH-------------------HHHHHHHHH
Confidence 479999999998866 89999999999 889999999999887776655432 34556664
Q ss_pred HHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHHcC-CCeEEEc
Q 007903 179 RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDG-GCLVILS 257 (585)
Q Consensus 179 ~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL~~-G~IPVi~ 257 (585)
+..+... .|+++|++ +..+++.+..+... ++++.+++..++.+.|+++++. |.|||++
T Consensus 61 ~~~l~~~--------~l~~~Gi~----a~~l~~~~~~~~~~---------~~~~~~~~~~~~~~~l~~~l~~~~~vpVv~ 119 (227)
T cd04234 61 SARLLAA--------ALRDRGIK----ARSLDARQAGITTD---------DNHGAARIIEISYERLKELLAEIGKVPVVT 119 (227)
T ss_pred HHHHHHH--------HHHHCCCC----eEEeCHHHCCEEcC---------CccchhhHHHHHHHHHHHHHhhCCCEEEec
Confidence 4444333 57899987 67777766443332 3445666777889999999999 9999999
Q ss_pred C-CccCCCCceeee---ChHHHHHHHHHHcCCCEEEEeecccccC-------CCCcccccccHHHHHHHHH
Q 007903 258 N-LGYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIR 317 (585)
Q Consensus 258 ~-v~~~~~G~~~ni---d~D~lAa~lA~~L~AdkLIilTDV~gl~-------~~~~lI~~it~~e~~~li~ 317 (585)
+ ++.+.+|++.++ ++|.+|+.+|.+|+||+|+++|||||++ +++++|++++.+|++++..
T Consensus 120 g~i~~~~~g~~~~l~rg~sD~~A~~lA~~l~A~~l~~~tdV~Gvy~~dP~~~~~a~~i~~i~~~e~~~l~~ 190 (227)
T cd04234 120 GFIGRNEDGEITTLGRGGSDYSAAALAAALGADEVEIWTDVDGIYTADPRIVPEARLIPEISYDEALELAY 190 (227)
T ss_pred CceecCCCCCEEEeeCCCcHHHHHHHHHHhCCCEEEEEECCCccCCCCCCCCCCceEcCcCCHHHHHHHHh
Confidence 9 688888998888 7999999999999999999999999983 3589999999999988754
|
AK is the first enzyme in the biosynthetic pathway of the aspartate family of amino acids (lysine, threonine, methionine, and isoleucine) and the bacterial cell wall component, meso-diaminopimelate. It also catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. One mechanism for the regulation of this pathway is by the production of several isoenzymes of aspartokinase with different repressors and allosteric inhibitors. Pairs of ACT domains are proposed to specifically bind amino acids leading to allosteric regulation of the enzyme. In Escherichia coli, three different aspartokinase isoenzymes are regulated specifically by lysine, methionine, and threonine. AK-HSDHI (ThrA) and AK-HSDHII (MetL) are bifunctional enzymes that consist of an N-terminal AK and a C-terminal homoserine dehyd |
| >PLN02418 delta-1-pyrroline-5-carboxylate synthase | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-23 Score=240.76 Aligned_cols=248 Identities=17% Similarity=0.173 Sum_probs=174.7
Q ss_pred CCeEEEEeCCccCCCCC-------hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccc---cCCc-cCCCHHH
Q 007903 99 GGTFVVIISGEIVSSPY-------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKY---LGRY-RITDSES 167 (585)
Q Consensus 99 ~k~iVIKlGGs~l~~~~-------l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~---~~g~-rvt~~~~ 167 (585)
.+++|||+||++|++++ +..++++|+.|++.|+++|||.+|...++.. .+++.... ...+ +.+....
T Consensus 15 ~~~iViK~G~ssl~~~~~~~~~~~i~~l~~~i~~l~~~g~~vvlVsSga~~~g~~--~l~~~~~~~~~~~~~~~~~~~~~ 92 (718)
T PLN02418 15 VKRVVIKVGTAVVTRDDGRLALGRLGALCEQIKELNSDGYEVILVSSGAVGVGRQ--RLRYRRLVNSSFADLQKPQMELD 92 (718)
T ss_pred CCEEEEEeCCCeecCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEecchHHHHHH--HHhhhhhhhcccccCCCCcchHH
Confidence 57999999999999864 6899999999999999999999996554433 33322210 0000 1111111
Q ss_pred HHHHHHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHH
Q 007903 168 LAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRER 247 (585)
Q Consensus 168 l~~~~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~l 247 (585)
. .+.+++||.. ++..|+. .|+++|++ ..++ -..+. ||+.. +......+.|+.|
T Consensus 93 ~-qa~aa~Gq~~--l~~~~~~-----~f~~~g~~--~~qi--llT~~--------------~~~~~-~~~~~~~~~l~~l 145 (718)
T PLN02418 93 G-KACAAVGQSE--LMALYDT-----LFSQLDVT--ASQL--LVTDS--------------DFRDP-DFRKQLSETVESL 145 (718)
T ss_pred H-HHHHHhhHHH--HHHHHHH-----HHHHcCCe--EEEE--EecHh--------------Hhcch-hHhHhHHHHHHHH
Confidence 1 2457889865 7777764 89999985 2222 22221 22111 1123346999999
Q ss_pred HcCCCeEEEcCC-ccCC-C-----CceeeeChHHHHHHHHHHcCCCEEEEeecccccC------CCCcccccccHHHHHH
Q 007903 248 LDGGCLVILSNL-GYSS-S-----GEVLNCNTYEVATACALAIEADKLICIIDGPILD------ESGHLIRFLTLQEADS 314 (585)
Q Consensus 248 L~~G~IPVi~~v-~~~~-~-----G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~------~~~~lI~~it~~e~~~ 314 (585)
|+.|.|||+++. .++. . +...++|+|.+|++||.+++||+|+|+|||||++ +++++|++++..+.+.
T Consensus 146 l~~g~iPVv~~nd~v~~~~~~~~~~~~~~~d~D~~A~~lA~~l~Ad~li~~TdVdGvy~~~p~~~~a~~i~~i~~~~~~~ 225 (718)
T PLN02418 146 LDLRVIPIFNENDAVSTRRAPYEDSSGIFWDNDSLAALLALELKADLLILLSDVEGLYTGPPSDPSSKLIHTYIKEKHQD 225 (718)
T ss_pred HHCCCEEEEcCCCCccccccccccccCeecCcHHHHHHHHHHcCCCEEEEeecCCeeecCCCCCCCceEcceecccchhh
Confidence 999999999973 3332 1 2336889999999999999999999999999983 3478888887654433
Q ss_pred HHHhhchhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCccccccccccccccc
Q 007903 315 LIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERL 394 (585)
Q Consensus 315 li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~ 394 (585)
.+..+ ..+..++| |
T Consensus 226 ~i~~~-------------------------------------------------~~s~~~tG-G---------------- 239 (718)
T PLN02418 226 EITFG-------------------------------------------------EKSRVGRG-G---------------- 239 (718)
T ss_pred hhhcc-------------------------------------------------cccccCCC-C----------------
Confidence 32111 11223456 6
Q ss_pred ccccCcHHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeeccccc
Q 007903 395 SRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLY 448 (585)
Q Consensus 395 ~~~~~m~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~~d~~ 448 (585)
|.+||+||..|.+.|++ ++|++|..++. |.++++++..||+|.++..
T Consensus 240 -----M~~Kl~Aa~~a~~~Gi~-v~I~~g~~~~~-l~~~l~g~~~GT~i~~~~~ 286 (718)
T PLN02418 240 -----MTAKVKAAVNAASAGIP-VVITSGYALDN-IRKVLRGERVGTLFHQDAH 286 (718)
T ss_pred -----cHHHHHHHHHHHHCCCc-EEEeCCCCcch-HHHHhcCCCCceEeccccc
Confidence 89999999999999998 89999999987 6788888899999988765
|
|
| >PRK08210 aspartate kinase I; Reviewed | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.7e-23 Score=226.23 Aligned_cols=192 Identities=16% Similarity=0.180 Sum_probs=157.2
Q ss_pred CCeEEEEeCCccCCCCC-hHHHHHHHHHHHHCCCeEEEEe-----CchHHHHHHHHHcCCcccccCCccCCCHHHHHHHH
Q 007903 99 GGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVP-----GTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAM 172 (585)
Q Consensus 99 ~k~iVIKlGGs~l~~~~-l~~l~~~Ia~L~~~G~~vVlVh-----Ggg~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~~ 172 (585)
++++|||+||+++++++ ...++++|+.+.+.|+++|||| ||||+++..+..+..... +.+++..++.+
T Consensus 1 m~~iViK~GGs~l~~~~~~~~~~~~i~~~~~~g~~~vvV~sa~g~~G~~~~t~~l~~~~~~~~-----~~~~~~~~~~l- 74 (403)
T PRK08210 1 MKIIVQKFGGTSVSTEERRKMAVNKIKKALKEGYKVVVVVSAMGRKGDPYATDTLLSLVGEEF-----SEISKREQDLL- 74 (403)
T ss_pred CCeEEEeECCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCCCCCCccHHHHHHHHHhc-----cCCChHHHHHH-
Confidence 36899999999999876 7899999999999999999988 677778777665443221 33566666653
Q ss_pred HHHhHHHHH--HHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHHcC
Q 007903 173 EAAGGIRMM--IEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDG 250 (585)
Q Consensus 173 ~~~G~i~~~--L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL~~ 250 (585)
.+.|+++.. +.+ .|+++|++ ++++++.|..++++.+ |+ .|++..++.+.|+.+++.
T Consensus 75 ~~~Ge~~s~~~~~~---------~l~~~Gi~----a~~l~~~~~~~~t~~~--------~~-~~~v~~~~~~~l~~~l~~ 132 (403)
T PRK08210 75 MSCGEIISSVVFSN---------MLNENGIK----AVALTGGQAGIITDDN--------FT-NAKIIEVNPDRILEALEE 132 (403)
T ss_pred HhHhHHHHHHHHHH---------HHHhCCCC----eEEechHHccEEccCC--------CC-ceeeehhhHHHHHHHHhc
Confidence 688888765 334 46889988 7899988877776542 32 367788899999999999
Q ss_pred CCeEEEcCC-ccCCCCceeee---ChHHHHHHHHHHcCCCEEEEeecccccC-------CCCcccccccHHHHHHHHHh
Q 007903 251 GCLVILSNL-GYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQ 318 (585)
Q Consensus 251 G~IPVi~~v-~~~~~G~~~ni---d~D~lAa~lA~~L~AdkLIilTDV~gl~-------~~~~lI~~it~~e~~~li~~ 318 (585)
|.|||++++ +.+.+|+++++ ++|.+|+.||.+|+||+++|+|||||++ +++++|++|+.+|+++++..
T Consensus 133 ~~vpVi~G~~~~~~~g~~~~l~rg~sD~~A~~lA~~l~A~~l~i~tDV~GV~~~dP~~~~~a~~i~~ls~~ea~~l~~~ 211 (403)
T PRK08210 133 GDVVVVAGFQGVTENGDITTLGRGGSDTTAAALGVALKAEYVDIYTDVDGIMTADPRIVEDARLLDVVSYNEVFQMAYQ 211 (403)
T ss_pred CCEEEeeCeeecCCCCCEEEeCCCchHHHHHHHHHHcCCCEEEEEECCCCCCcCCCCcCCCCeECCccCHHHHHHHHHC
Confidence 999999997 78889999988 6999999999999999999999999983 36899999999999998754
|
|
| >PRK00358 pyrH uridylate kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.5e-22 Score=203.07 Aligned_cols=215 Identities=19% Similarity=0.174 Sum_probs=153.7
Q ss_pred CeEEEEeCCccCCCC-----C---hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHH-cCCcccccCCccCCCHHHHHH
Q 007903 100 GTFVVIISGEIVSSP-----Y---LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSE-RGHEAKYLGRYRITDSESLAA 170 (585)
Q Consensus 100 k~iVIKlGGs~l~~~-----~---l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~-~g~~~~~~~g~rvt~~~~l~~ 170 (585)
+++|||+||++++++ + +++++++|+.+.+.|+++|||||||++++..... .++ +...++.
T Consensus 1 ~~iViK~GGs~l~~~~~~~~~~~~i~~~~~~i~~~~~~g~~vvlV~gGG~~a~~~~~~~~~~-----------~~~~~~~ 69 (231)
T PRK00358 1 KRVLLKLSGEALAGEKGFGIDPEVLDRIAEEIKEVVELGVEVAIVVGGGNIFRGYIGAAAGM-----------DRATADY 69 (231)
T ss_pred CeEEEEeccceecCCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEECCCHHHHHHHHhhcCC-----------ChhhHHH
Confidence 479999999999843 2 6899999999999999999999999887765321 222 1223444
Q ss_pred HHHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHHcC
Q 007903 171 AMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDG 250 (585)
Q Consensus 171 ~~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL~~ 250 (585)
...+..++|..++.. .|.++|++ +..++..+ ++..+. ....+.+.++|+.
T Consensus 70 ~~~~~~~l~~~ll~~--------~l~~~Gi~----a~~~~~~~----------------~~~~~~--~~~~~~~~~~l~~ 119 (231)
T PRK00358 70 MGMLATVMNALALQD--------ALERAGVD----TRVQSAIP----------------MPQVAE--PYIRRRAIRHLEK 119 (231)
T ss_pred HHHHHHHHHHHHHHH--------HHHHcCCC----eEEechhh----------------cccccC--cccHHHHHHHHHC
Confidence 434555677654443 57889987 22111111 111111 1245678899999
Q ss_pred CCeEEEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC-------CCCcccccccHHHHHHHHHhhchhh
Q 007903 251 GCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQS 323 (585)
Q Consensus 251 G~IPVi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~-------~~~~lI~~it~~e~~~li~~~~~~~ 323 (585)
|.|||+++.. |. -..++|.+|++||.+|+||+|+++|||||++ +++++|++++.+|+.++ +.
T Consensus 120 g~vPVv~g~~----~~-~~~ssD~~A~~lA~~l~A~~li~~tdVdGVy~~dP~~~~~a~~i~~i~~~e~~~~---g~--- 188 (231)
T PRK00358 120 GRVVIFAAGT----GN-PFFTTDTAAALRAEEIGADVLLKATNVDGVYDADPKKDPDAKKYDRLTYDEVLEK---GL--- 188 (231)
T ss_pred CCEEEEECCC----CC-CCCCchHHHHHHHHHcCCCEEEEeeCcCceEcCCCCCCCCCEEeeEecHHHHHHc---CC---
Confidence 9999997521 22 1458999999999999999999999999983 36999999987653222 11
Q ss_pred hHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccCcHHH
Q 007903 324 EIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSE 403 (585)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~~k 403 (585)
..-+
T Consensus 189 ----------------------------------------------------------------------------~~~d 192 (231)
T PRK00358 189 ----------------------------------------------------------------------------KVMD 192 (231)
T ss_pred ----------------------------------------------------------------------------cchh
Confidence 1236
Q ss_pred HHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeec
Q 007903 404 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (585)
Q Consensus 404 l~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~ 444 (585)
+.++..|.+.|++ ++|+||..++. |.+++.++..||.|.
T Consensus 193 ~~a~~~a~~~~i~-v~I~~g~~~~~-l~~~l~g~~~GT~i~ 231 (231)
T PRK00358 193 ATAISLARDNKIP-IIVFNMNKPGN-LKRVVKGEHIGTLVS 231 (231)
T ss_pred HHHHHHHHHcCCc-EEEECCCCchH-HHHHHCCCCCCEEeC
Confidence 7788888899997 89999999987 677788888999873
|
|
| >cd04239 AAK_UMPK-like AAK_UMPK-like: UMP kinase (UMPK)-like, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-22 Score=202.92 Aligned_cols=214 Identities=18% Similarity=0.167 Sum_probs=154.8
Q ss_pred eEEEEeCCccCCCCC-------hHHHHHHHHHHHHCCCeEEEEeCchHHHHH-HHHHcCCcccccCCccCCCHHHHHHHH
Q 007903 101 TFVVIISGEIVSSPY-------LDPILKDIAFLHHLGIRFVLVPGTHVQIDK-LLSERGHEAKYLGRYRITDSESLAAAM 172 (585)
Q Consensus 101 ~iVIKlGGs~l~~~~-------l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~-~l~~~g~~~~~~~g~rvt~~~~l~~~~ 172 (585)
++|||+||+++++++ ++.+++.|+.+.+.|+++|||||||++++. ....+++. +..++...
T Consensus 1 ~iViKiGGs~l~~~~~~~~~~~i~~~a~~i~~~~~~g~~vvvV~ggG~~a~~~~~~~~~~~-----------~~~~~~~~ 69 (229)
T cd04239 1 RIVLKLSGEALAGEGGGIDPEVLKEIAREIKEVVDLGVEVAIVVGGGNIARGYIAAARGMP-----------RATADYIG 69 (229)
T ss_pred CEEEEECcceecCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCChHHhhHHHhhcCCC-----------hhhHHHHH
Confidence 589999999998852 788999999998899999999998886443 32233322 11233322
Q ss_pred HHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHHcCCC
Q 007903 173 EAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGC 252 (585)
Q Consensus 173 ~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL~~G~ 252 (585)
.+..++|..|++. .|.++|++ +..+++.+-.. .....+.+.|..+++.|.
T Consensus 70 ~~~~~l~~~l~~~--------~l~~~Gi~----a~~~~~~~~~~------------------~~~~~~~~~l~~~l~~g~ 119 (229)
T cd04239 70 MLATVMNALALQD--------ALEKLGVK----TRVMSAIPMQG------------------VAEPYIRRRAIRHLEKGR 119 (229)
T ss_pred HHHHHHHHHHHHH--------HHHHcCCC----EEEeCHHHHhh------------------hhccccHHHHHHHHhCCC
Confidence 2333566666543 46888987 44444433100 012347888999999999
Q ss_pred eEEEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC-------CCCcccccccHHHHHHHHHhhchhhhH
Q 007903 253 LVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEI 325 (585)
Q Consensus 253 IPVi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~-------~~~~lI~~it~~e~~~li~~~~~~~~~ 325 (585)
|||+++.. |. ...++|.+|+++|.+|+||+|+++|||||++ +++++|++++.+|+.++..
T Consensus 120 ipVi~g~~----g~-~~~~sD~~A~~lA~~l~a~~li~~tdVdGvy~~dP~~~~~a~~i~~i~~~e~~~~~~-------- 186 (229)
T cd04239 120 IVIFGGGT----GN-PGFTTDTAAALRAEEIGADVLLKATNVDGVYDADPKKNPDAKKYDRISYDELLKKGL-------- 186 (229)
T ss_pred EEEEeCcc----CC-CCCCcHHHHHHHHHHcCCCEEEEEECCCcccCCCCCCCCCCeEEeEEcHHHHHHHhc--------
Confidence 99999764 22 2358999999999999999999999999983 2589999999877655421
Q ss_pred HHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccCcHHHHH
Q 007903 326 AANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELA 405 (585)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~~kl~ 405 (585)
|..+..
T Consensus 187 --------------------------------------------------------------------------~~~~~~ 192 (229)
T cd04239 187 --------------------------------------------------------------------------KVMDAT 192 (229)
T ss_pred --------------------------------------------------------------------------CCccHH
Confidence 122455
Q ss_pred HHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeec
Q 007903 406 AAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (585)
Q Consensus 406 aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~ 444 (585)
++..+.+.|++ ++|++|..++. |.+++.++..||.|.
T Consensus 193 a~~~~~~~~i~-v~I~~g~~~~~-l~~~l~g~~~GT~i~ 229 (229)
T cd04239 193 ALTLCRRNKIP-IIVFNGLKPGN-LLRALKGEHVGTLIE 229 (229)
T ss_pred HHHHHHHCCCe-EEEECCCChhH-HHHHHcCCCCCeEeC
Confidence 67778888986 89999999988 678888888999873
|
Regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway). The UMP kinases of E. coli (Ec) and Pyrococcus furiosus (Pf) are known to function as homohexamers, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial UMPKs have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Als |
| >PRK06635 aspartate kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.2e-22 Score=216.42 Aligned_cols=191 Identities=18% Similarity=0.223 Sum_probs=151.9
Q ss_pred CCeEEEEeCCccCCCCC-hHHHHHHHHHHHHCCCeEEEEeCc-hHHHHHHHHHcCCcccccCCccCCCHHHHHHHHHHHh
Q 007903 99 GGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGT-HVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAG 176 (585)
Q Consensus 99 ~k~iVIKlGGs~l~~~~-l~~l~~~Ia~L~~~G~~vVlVhGg-g~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~~~~~G 176 (585)
++++|||+||+++.+++ ++.++++|+.+.+.|.++|||||| |+.++.+++....... .++++.++.+ .+.|
T Consensus 1 m~~iViK~GGs~l~~~~~~~~~~~~i~~~~~~g~~~vvV~sg~~~~~~~l~~~~~~~~~------~~~~~~~~~~-~~~G 73 (404)
T PRK06635 1 MALIVQKFGGTSVGDVERIKRVAERVKAEVEAGHQVVVVVSAMGGTTDELLDLAKEVSP------LPDPRELDML-LSTG 73 (404)
T ss_pred CCeEEEeECCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCcHHHHHHHHHHhcc------CCCHHHHHHH-hhhh
Confidence 36899999999999866 899999999999899999988886 6777777665432111 1255666643 3456
Q ss_pred H-HHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHHcCCCeEE
Q 007903 177 G-IRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVI 255 (585)
Q Consensus 177 ~-i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL~~G~IPV 255 (585)
+ ++..+... .|+++|++ ++++++.+..+++.. +|+ .+++..++.+.|+++++.|.|||
T Consensus 74 e~~~~~~~~~--------~l~~~g~~----a~~l~~~~~~~~~~~--------~~~-~~~~~~~~~~~l~~~l~~~~ipV 132 (404)
T PRK06635 74 EQVSVALLAM--------ALQSLGVK----ARSFTGWQAGIITDS--------AHG-KARITDIDPSRIREALDEGDVVV 132 (404)
T ss_pred HHHHHHHHHH--------HHHhCCCC----eEEeChhhCCEEecC--------CCC-ceEeeecCHHHHHHHHhCCCEEE
Confidence 4 45444332 47899987 788888876666543 233 47788889999999999999999
Q ss_pred EcC-CccCCCCceeee---ChHHHHHHHHHHcCCCEEEEeecccccC-------CCCcccccccHHHHHHHHH
Q 007903 256 LSN-LGYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIR 317 (585)
Q Consensus 256 i~~-v~~~~~G~~~ni---d~D~lAa~lA~~L~AdkLIilTDV~gl~-------~~~~lI~~it~~e~~~li~ 317 (585)
+++ ++.+.+|+++++ ++|.+|+.+|.+|+||+|+++|||||++ +++++|++++.+|++++..
T Consensus 133 i~g~~~~~~~g~~~~l~rg~sD~~A~~lA~~l~A~~l~~~tDV~Gv~~~dP~~~~~a~~i~~i~~~e~~~l~~ 205 (404)
T PRK06635 133 VAGFQGVDEDGEITTLGRGGSDTTAVALAAALKADECEIYTDVDGVYTTDPRIVPKARKLDKISYEEMLELAS 205 (404)
T ss_pred ecCccEeCCCCCEEecCCCChHHHHHHHHHHhCCCEEEEEEcCCCCCcCCCCCCCCceECCccCHHHHHHHHH
Confidence 999 588999999998 9999999999999999999999999983 3689999999999888853
|
|
| >cd04255 AAK_UMPK-MosAB AAK_UMPK-MosAB: This CD includes the alpha and beta subunits of the Mo storage protein (MosA and MosB) which are related to uridine monophosphate kinase (UMPK) enzymes that catalyze the phosphorylation of UMP by ATP, yielding UDP, and playing a key role in pyrimidine nucleotide biosynthesis | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.9e-22 Score=203.90 Aligned_cols=212 Identities=21% Similarity=0.255 Sum_probs=151.1
Q ss_pred CeEEEEeCCccCCCCC---hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHH---HcCCcccccCCccCCCHHHHHHHHH
Q 007903 100 GTFVVIISGEIVSSPY---LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLS---ERGHEAKYLGRYRITDSESLAAAME 173 (585)
Q Consensus 100 k~iVIKlGGs~l~~~~---l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~---~~g~~~~~~~g~rvt~~~~l~~~~~ 173 (585)
..+|||||||++++++ +..++++|+.+.+ +++++||||||++.+...+ .+|++ ...++....
T Consensus 31 ~~~ViKiGGSvitdk~~~~i~~la~~i~~~~~-~~~vilV~GGG~~~r~~~~~~~~~g~~-----------~~~~~~~~~ 98 (262)
T cd04255 31 DLNVVKIGGQSIIDRGAEAVLPLVEEIVALRP-EHKLLILTGGGTRARHVYSIGLDLGMP-----------TGVLAKLGA 98 (262)
T ss_pred CcEEEEeccceecCCcHHHHHHHHHHHHHHhC-CCcEEEEECCHHHHHHHHHHHHHcCCC-----------chHHHHHHH
Confidence 4699999999999875 7899999999876 7899999999998854331 23332 122323323
Q ss_pred HHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHHcCCCe
Q 007903 174 AAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCL 253 (585)
Q Consensus 174 ~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL~~G~I 253 (585)
++..+|..++.. .|..+|++ + +...+.+.++++|+.|+|
T Consensus 99 aa~~ln~lv~~~--------~l~~~g~~----~-----------------------------i~~~~~~~l~~lL~~g~v 137 (262)
T cd04255 99 SVSEQNAEMLAT--------LLAKHGGS----K-----------------------------VGHGDLLQLPTFLKAGRA 137 (262)
T ss_pred HHHHHHHHHHHH--------HHHHcCCC----c-----------------------------cccccHHHHHHHHHCCCe
Confidence 444555555432 34566654 1 112345679999999999
Q ss_pred EEEcCCc-c------CCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC-------CCCcccccccHHHHHHHHHhh
Q 007903 254 VILSNLG-Y------SSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQR 319 (585)
Q Consensus 254 PVi~~v~-~------~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~-------~~~~lI~~it~~e~~~li~~~ 319 (585)
||+++.. + +..|...++|+|++|+++|.+|+||+|+++|||||++ +++++|++++.+|+.++....
T Consensus 138 PVi~g~~~~~~~~i~~~~g~~~~~~~D~~Aa~lA~~l~ad~li~~TdVdGVy~~dP~~~~~a~~i~~i~~~~~~~~~~~~ 217 (262)
T cd04255 138 PVISGMPPYGLWEHPAEEGRIPPHRTDVGAFLLAEVIGARNLIFVKDEDGLYTADPKKNKKAEFIPEISAAELLKKDLDD 217 (262)
T ss_pred EEEeCCcCCCeeeecCCCccCCCCCcHHHHHHHHHHhCCCEEEEEeccCeeECCCCCCCCCCeEccEeCHHHHHHHhcCC
Confidence 9999762 1 2335577999999999999999999999999999983 368999999986655442100
Q ss_pred chhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccC
Q 007903 320 VKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNG 399 (585)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~ 399 (585)
. .+ +| |
T Consensus 218 ~---------------------------------------------------~~-~~-~--------------------- 223 (262)
T cd04255 218 L---------------------------------------------------VL-ER-P--------------------- 223 (262)
T ss_pred C---------------------------------------------------CC-cH-H---------------------
Confidence 0 00 12 3
Q ss_pred cHHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeec
Q 007903 400 YLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (585)
Q Consensus 400 m~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~ 444 (585)
|.+|+++|. ++..++|+||+.++. |.+++.++..||+|.
T Consensus 224 ~~~~l~aa~-----~~~~v~I~~g~~~~~-L~~~l~g~~~GT~i~ 262 (262)
T cd04255 224 VLDLLQNAR-----HVKEVQIVNGLVPGN-LTRALRGEHVGTIIR 262 (262)
T ss_pred HHHHHHHhC-----CCCcEEEEeCCCCCH-HHHHHcCCCCceEeC
Confidence 788887752 223599999999987 778888888999874
|
The Mo storage protein from the nitrogen-fixing bacterium, Azotobacter vinelandii, is characterized as an alpha4-beta4 octamer containing a polynuclear molybdenum-oxide cluster which is ATP-dependent to bind Mo and pH-dependent to release Mo. These and related bacterial sequences in this CD are members of the Amino Acid Kinase Superfamily (AAK). |
| >PRK08841 aspartate kinase; Validated | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-21 Score=210.67 Aligned_cols=191 Identities=18% Similarity=0.284 Sum_probs=151.2
Q ss_pred CeEEEEeCCccCCCCC-hHHHHHHHHHHHHCCCeEEEEeCchHH-HHHHHHHcCCcccccCCccCCCHHHHHHHHHHHhH
Q 007903 100 GTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQ-IDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGG 177 (585)
Q Consensus 100 k~iVIKlGGs~l~~~~-l~~l~~~Ia~L~~~G~~vVlVhGgg~~-i~~~l~~~g~~~~~~~g~rvt~~~~l~~~~~~~G~ 177 (585)
+++|+|+||+++.+++ ++.++++|+.+.+.|.++||||||++. .+.++. +..... +++++..++++. +.|+
T Consensus 2 ~~~V~KfGGtsv~~~~~i~~va~~I~~~~~~g~~vvvVvSa~~~~td~ll~-~~~~~~-----~~~~~~~~d~l~-s~GE 74 (392)
T PRK08841 2 PLIVQKFGGTSVGSIERIQTVAEHIIKAKNDGNQVVVVVSAMAGETNRLLG-LAKQVD-----SVPTARELDVLL-SAGE 74 (392)
T ss_pred CeEEEeECcccCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCchHHHHHHH-hhhhhc-----cCCCHHHHHHHH-HHHH
Confidence 5899999999998866 899999999999999999999999874 444443 332211 556777777654 4465
Q ss_pred H-HHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHHcCCCeEEE
Q 007903 178 I-RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVIL 256 (585)
Q Consensus 178 i-~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL~~G~IPVi 256 (585)
. ...|++. .|+++|++ +..+++.+..+++.. .|+ .+++..++.+.|+++++.|.|||+
T Consensus 75 ~~s~~lla~--------~L~~~Gi~----a~~l~~~~~~i~t~~--------~~~-~~~i~~~~~~~i~~ll~~~~vpVv 133 (392)
T PRK08841 75 QVSMALLAM--------TLNKLGYA----ARSLTGAQANIVTDN--------QHN-DATIKHIDTSTITELLEQDQIVIV 133 (392)
T ss_pred HHHHHHHHH--------HHHhCCCC----eEEEehhHcCEEecC--------CCC-CceechhhHHHHHHHHhCCCEEEE
Confidence 4 3334432 57889987 788888776555432 121 367777889999999999999999
Q ss_pred cCC-ccCCCCceeee---ChHHHHHHHHHHcCCCEEEEeeccccc---C----CCCcccccccHHHHHHHHHh
Q 007903 257 SNL-GYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTLQEADSLIRQ 318 (585)
Q Consensus 257 ~~v-~~~~~G~~~ni---d~D~lAa~lA~~L~AdkLIilTDV~gl---~----~~~~lI~~it~~e~~~li~~ 318 (585)
++. +.+.+|++.++ ++|.+|+.+|.+|+||.|+++|||||+ | +++++|++|+.+|+.++...
T Consensus 134 ~Gf~g~~~~g~~ttlgrggsD~tAa~lA~~L~Ad~l~i~TDVdGVyt~DP~~v~~A~~i~~is~~ea~ela~~ 206 (392)
T PRK08841 134 AGFQGRNENGDITTLGRGGSDTTAVALAGALNADECQIFTDVDGVYTCDPRVVKNARKLDVIDFPSMEAMARK 206 (392)
T ss_pred eCCcccCCCCCEEEeCCCChHHHHHHHHHHcCCCEEEEEeCCCCCCcCCCCCCCCceEcccccHHHHHHHHhc
Confidence 985 78889999988 999999999999999999999999998 3 46899999999998888643
|
|
| >cd04254 AAK_UMPK-PyrH-Ec UMP kinase (UMPK)-Ec, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway) | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.5e-22 Score=198.41 Aligned_cols=215 Identities=20% Similarity=0.195 Sum_probs=152.6
Q ss_pred CeEEEEeCCccCCCCC--------hHHHHHHHHHHHHCCCeEEEEeCchHHH-HHHHHHcCCcccccCCccCCCHHHHHH
Q 007903 100 GTFVVIISGEIVSSPY--------LDPILKDIAFLHHLGIRFVLVPGTHVQI-DKLLSERGHEAKYLGRYRITDSESLAA 170 (585)
Q Consensus 100 k~iVIKlGGs~l~~~~--------l~~l~~~Ia~L~~~G~~vVlVhGgg~~i-~~~l~~~g~~~~~~~g~rvt~~~~l~~ 170 (585)
+++||||||+++++++ +.+++++|+.+...|+++|||||||+++ +...++++ +.+.+. +.
T Consensus 1 ~~iViKlGGs~itdk~~~~~~~~~i~~~a~~i~~~~~~~~~~viVhGgG~~~~~~~~~~~~-------~~~~~~----d~ 69 (231)
T cd04254 1 KRVLLKLSGEALAGENGFGIDPEVLNRIAREIKEVVDLGVEVAIVVGGGNIFRGASAAEAG-------MDRATA----DY 69 (231)
T ss_pred CeEEEEeCceEECCCCCCCCCHHHHHHHHHHHHHHHHCCCcEEEEECCCcccccchhhhcC-------CCchhh----hH
Confidence 5799999999998542 6789999999888899999999999875 11122222 223222 22
Q ss_pred HHHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHHcC
Q 007903 171 AMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDG 250 (585)
Q Consensus 171 ~~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL~~ 250 (585)
+..+..++|..++.. .|+.+|++ +..+++.+-+ ..+ ..++.+.++.+|+.
T Consensus 70 ~g~~~~~~n~~ll~~--------~L~~~Gv~----a~~l~~~~~~----------------~~~--~~~~~~~l~~~l~~ 119 (231)
T cd04254 70 MGMLATVINALALQD--------ALESLGVK----TRVMSAIPMQ----------------GVA--EPYIRRRAIRHLEK 119 (231)
T ss_pred HHHHHHHHHHHHHHH--------HHHHcCCC----eEEEcHHHhh----------------hhh--cccCHHHHHHHHHC
Confidence 222445666544332 46788987 5555544310 111 24678999999999
Q ss_pred CCeEEEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC-------CCCcccccccHHHHHHHHHhhchhh
Q 007903 251 GCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQS 323 (585)
Q Consensus 251 G~IPVi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~-------~~~~lI~~it~~e~~~li~~~~~~~ 323 (585)
|+|||+++. .|. ..+++|.+|++||.+|+||+|+++|||||++ ++++++++++.+|+.+. +.
T Consensus 120 g~ipV~~g~----~G~-~~~~~D~~a~~lA~~l~a~~l~~~tdVdGvy~~dp~~~~~a~~i~~i~~~~~~~~---~~--- 188 (231)
T cd04254 120 GRVVIFAGG----TGN-PFFTTDTAAALRAIEINADVILKATKVDGVYDADPKKNPNAKRYDHLTYDEVLSK---GL--- 188 (231)
T ss_pred CCEEEEECC----cCC-CCCCcHHHHHHHHHHcCCCEEEEEeCCCEEEecCCCCCCCcEEeeEecHHHHHhc---ch---
Confidence 999999832 232 3558999999999999999999999999983 25889999997665221 11
Q ss_pred hHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccCcHHH
Q 007903 324 EIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSE 403 (585)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~~k 403 (585)
..-+
T Consensus 189 ----------------------------------------------------------------------------~~~d 192 (231)
T cd04254 189 ----------------------------------------------------------------------------KVMD 192 (231)
T ss_pred ----------------------------------------------------------------------------hhhH
Confidence 0124
Q ss_pred HHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeec
Q 007903 404 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (585)
Q Consensus 404 l~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~ 444 (585)
+.++..|.+.|++ ++|++|..++. |.+++.++..||.|.
T Consensus 193 ~~a~~~a~~~gi~-~~I~~g~~~~~-l~~~l~g~~~GT~i~ 231 (231)
T cd04254 193 ATAFTLCRDNNLP-IVVFNINEPGN-LLKAVKGEGVGTLIS 231 (231)
T ss_pred HHHHHHHHHCCCe-EEEEeCCCccH-HHHHHCCCCCCEEeC
Confidence 6677778888998 89999999998 566677888999984
|
The UMP kinase of E. coli (Ec) is known to function as a homohexamer, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial and chloroplast UMPKs (this CD) have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Members of this CD be |
| >TIGR00656 asp_kin_monofn aspartate kinase, monofunctional class | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.4e-22 Score=213.02 Aligned_cols=192 Identities=19% Similarity=0.216 Sum_probs=151.1
Q ss_pred eEEEEeCCccCCCCC-hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHHHHHHhH-H
Q 007903 101 TFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGG-I 178 (585)
Q Consensus 101 ~iVIKlGGs~l~~~~-l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~~~~~G~-i 178 (585)
++|+|+||+++.+++ ++.++++|+.+++.|+++||||||++.++..+.+++... . ..++++.+...++ ++|+ +
T Consensus 2 ~iViK~GGs~~~~~~~i~~~~~~i~~~~~~g~~~vvV~sg~~~~t~~l~~~~~~~-~--~~~~~~~~~~~i~--~~Ge~~ 76 (401)
T TIGR00656 2 LIVQKFGGTSVGSGERIKNAARIVLKEKKEGHKVVVVVSAMSGVTDALVEISEKA-I--RDAITPRERDELV--SHGERL 76 (401)
T ss_pred cEEEEECCcCcCCHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCChHHHHHHHHHH-h--ccCCChHHHHHHh--hHHHHH
Confidence 689999999999876 899999999999999999999999988888776554210 0 0134554443333 3465 3
Q ss_pred HHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecH-HHHHHHHcCCCeEEEc
Q 007903 179 RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDV-TRMRERLDGGCLVILS 257 (585)
Q Consensus 179 ~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~-~~I~~lL~~G~IPVi~ 257 (585)
+..+... .|+++|++ ++++++.+..+++..+ |+ .+++..++. +.|+++++.|.|||++
T Consensus 77 s~~~~~~--------~l~~~g~~----a~~l~~~~~~~~t~~~--------~~-~~~~~~~~~~~~l~~~l~~~~vpVi~ 135 (401)
T TIGR00656 77 SSALFSG--------ALRDLGVK----AIWLDGGEAGIITDDN--------FG-NAKIDIIATEERLLPLLEEGIIVVVA 135 (401)
T ss_pred HHHHHHH--------HHHhCCCc----eEEeccccceEEeCCC--------CC-ceEeeecchHHHHHHHHhCCCEEEec
Confidence 3333332 57899988 7899988877776542 22 356778888 9999999999999999
Q ss_pred C-CccCCCCceeee---ChHHHHHHHHHHcCCCEEEEeecccccC-------CCCcccccccHHHHHHHHHh
Q 007903 258 N-LGYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQ 318 (585)
Q Consensus 258 ~-v~~~~~G~~~ni---d~D~lAa~lA~~L~AdkLIilTDV~gl~-------~~~~lI~~it~~e~~~li~~ 318 (585)
+ ++.+.+|+.+++ ++|.+|+.+|.+|+||+|+++|||||++ +++++|++++.+|+.+++..
T Consensus 136 g~~~~~~~g~~~~lgrg~sD~~A~~lA~~l~A~~l~i~tdV~Gv~~~DP~~~~~a~~i~~ls~~ea~~l~~~ 207 (401)
T TIGR00656 136 GFQGATEKGYTTTLGRGGSDYTAALLAAALKADRVDIYTDVPGVYTTDPRVVEAAKRIDKISYEEALELATF 207 (401)
T ss_pred CcceeCCCCCEeecCCCcHHHHHHHHHHHcCCCEEEEEECCCCCCcCCCCCCCCcEECCccCHHHHHHHHHc
Confidence 9 688888998887 6999999999999999999999999983 36899999999999999754
|
The Lys-sensitive enzyme of Bacillus subtilis resembles the E. coli form but is an alpha 2/beta 2 heterotetramer, where the beta subunit is translated from an in-phase alternative initiator at Met-246. The protein slr0657 from Synechocystis PCC6803 is extended by a duplication of the C-terminal region corresponding to the beta chain. Incorporation of a second copy of the C-terminal domain may be quite common in this subgroup of aspartokinases. |
| >PRK14558 pyrH uridylate kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.4e-21 Score=194.32 Aligned_cols=216 Identities=18% Similarity=0.183 Sum_probs=149.7
Q ss_pred CeEEEEeCCccCCCCC--------hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHH
Q 007903 100 GTFVVIISGEIVSSPY--------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA 171 (585)
Q Consensus 100 k~iVIKlGGs~l~~~~--------l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~ 171 (585)
+++|||+|||+|++++ ++.++++|+.+++.|+++|||||||.+.. .....++ + ....+.+
T Consensus 1 ~riviKlGgs~lt~~~~~~~~~~~i~~la~~i~~~~~~g~~viiV~GgGs~~~-g~~~~~~----------~-~~~~d~i 68 (231)
T PRK14558 1 KRVLLKLSGEALSGEGEKGFDPERVNYLVNEIKSVVEYGFKIGIVIGAGNLFR-GVELKEL----------S-PTRADQI 68 (231)
T ss_pred CeEEEEeeHHHccCCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEECccHHHH-HHhccCC----------C-hHHHHHH
Confidence 5799999999998753 68899999999999999999999987633 2111111 1 1122222
Q ss_pred HHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHHcCC
Q 007903 172 MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGG 251 (585)
Q Consensus 172 ~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL~~G 251 (585)
....-.+|..++.. .|.++|++ ++.+.. ++.. +.+...+.+.++.+|+.|
T Consensus 69 g~~~~~ln~~~~~~--------~l~~~gi~----a~~~~~----~~~~--------------~~~~~~~~~~i~~ll~~g 118 (231)
T PRK14558 69 GMLGTVINALYLKD--------IFEKSGLK----AVIVSQ----IVNL--------------PSVEPINYDDIELYFRAG 118 (231)
T ss_pred HHHHHHHHHHHHHH--------HHHHcCCC----eEEecc----cccc--------------chhhhhhHHHHHHHHHCC
Confidence 11112234332221 57889987 444332 1110 111234578999999999
Q ss_pred CeEEEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC-------CCCcccccccHHHHHHHHHhhchhhh
Q 007903 252 CLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSE 324 (585)
Q Consensus 252 ~IPVi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~-------~~~~lI~~it~~e~~~li~~~~~~~~ 324 (585)
.|||+++.. | .-++++|.+|+.+|..|+||.|+++|||||++ |++++|++++.+|+.++ +.
T Consensus 119 ~vpV~~G~~----~-~~~~~~D~~a~~lA~~l~a~~l~~~tdVdGvy~~dP~~~~~a~~i~~i~~~e~~~~---g~---- 186 (231)
T PRK14558 119 YIVIFAGGT----S-NPFFTTDTAAALRAVEMKADILIKATKVDGIYDKDPKKFPDAKKIDHLTFSEAIKM---GL---- 186 (231)
T ss_pred CEEEEECCC----C-CCCCCcHHHHHHHHHHcCCCEEEEEecCCeeEccCCCCCCCCeEcccccHHHHHHc---Cc----
Confidence 999999742 1 23568999999999999999999999999983 35899999987664332 11
Q ss_pred HHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccCcHHHH
Q 007903 325 IAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSEL 404 (585)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~~kl 404 (585)
. . | +.
T Consensus 187 ---------------------------------------------------~-~---------------------~--d~ 191 (231)
T PRK14558 187 ---------------------------------------------------K-V---------------------M--DT 191 (231)
T ss_pred ---------------------------------------------------c-c---------------------c--cH
Confidence 0 1 2 24
Q ss_pred HHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeeccc
Q 007903 405 AAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446 (585)
Q Consensus 405 ~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~~d 446 (585)
.++..|.+.|++ ++|+||..++. |..++.++..||.|.++
T Consensus 192 ~a~~~a~~~gi~-v~I~ng~~~~~-l~~~l~g~~~GT~i~~~ 231 (231)
T PRK14558 192 EAFSICKKYGIT-ILVINFFEPGN-LLKALKGENVGTLVVPD 231 (231)
T ss_pred HHHHHHHHCCCC-EEEEeCCCCCH-HHHHHCCCCCcEEeCCC
Confidence 567777889998 89999999988 55667888899999754
|
|
| >PRK07431 aspartate kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.9e-21 Score=216.49 Aligned_cols=191 Identities=19% Similarity=0.262 Sum_probs=145.4
Q ss_pred CeEEEEeCCccCCCCC-hHHHHHHHHHHHHCCCeEEEEeCc-hHHHHHHHHHcCCcccccCCccCCCHHHHHHHHHHHh-
Q 007903 100 GTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGT-HVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAG- 176 (585)
Q Consensus 100 k~iVIKlGGs~l~~~~-l~~l~~~Ia~L~~~G~~vVlVhGg-g~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~~~~~G- 176 (585)
+++|+|+||+++.+++ ++.++++|+.+.+.|+++|||||+ |...+.++ +++.... + + .+...++.+. +.|
T Consensus 2 ~~iViKfGGss~~~~~~i~~~a~~I~~~~~~g~~vvvV~sa~g~~t~~l~-~~~~~~t--~--~-~~~~~~~~~l-s~Ge 74 (587)
T PRK07431 2 ALIVQKFGGTSVGSVERIQAVAQRIARTKEAGNDVVVVVSAMGKTTDELV-KLAKEIS--S--N-PPRREMDMLL-STGE 74 (587)
T ss_pred CeEEEEECchhcCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCchhHHHH-HHHHHhc--c--C-CCHHHHHHHH-HHhH
Confidence 5899999999998866 899999999999999999999996 55555543 3332100 0 1 1223333332 334
Q ss_pred HHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHHcCCCeEEE
Q 007903 177 GIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVIL 256 (585)
Q Consensus 177 ~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL~~G~IPVi 256 (585)
+++..+++. .|+++|++ ++++++.+..+++.. .++ .+++..++.+.|+++++.|.|||+
T Consensus 75 ~~s~~l~~~--------~l~~~gi~----a~~l~~~~~~~~~~~--------~~~-~~~i~~~~~~~l~~~l~~g~vpVv 133 (587)
T PRK07431 75 QVSIALLSM--------ALHELGQP----AISLTGAQVGIVTES--------EHG-RARILEIKTDRIQRHLDAGKVVVV 133 (587)
T ss_pred HHHHHHHHH--------HHHHCCCC----eEEechhHcCeEecC--------CCC-ceeeeeccHHHHHHHHhCCCeEEe
Confidence 456656653 47889988 789988887666543 233 378888899999999999999999
Q ss_pred cCC-ccC--CCCceeee---ChHHHHHHHHHHcCCCEEEEeecccccC---C----CCcccccccHHHHHHHHHh
Q 007903 257 SNL-GYS--SSGEVLNC---NTYEVATACALAIEADKLICIIDGPILD---E----SGHLIRFLTLQEADSLIRQ 318 (585)
Q Consensus 257 ~~v-~~~--~~G~~~ni---d~D~lAa~lA~~L~AdkLIilTDV~gl~---~----~~~lI~~it~~e~~~li~~ 318 (585)
++. +.+ ..|++.++ ++|.+|+.||.+|+||+|+++|||||++ | ++++|++++.+|+.+++..
T Consensus 134 ~g~~g~~~~~~g~~~~lgrggsD~~A~~lA~~l~A~~l~i~TDVdGVyt~DP~~~~~a~~i~~i~~~e~~el~~~ 208 (587)
T PRK07431 134 AGFQGISLSSNLEITTLGRGGSDTSAVALAAALGADACEIYTDVPGVLTTDPRLVPEAQLMDEISCDEMLELASL 208 (587)
T ss_pred cCCcCCCCCCCCCEeecCCCchHHHHHHHHHHcCCCEEEEEeCCCccCcCCCCCCCCCeECCCcCHHHHHHHHhC
Confidence 975 443 44788765 8999999999999999999999999983 3 6899999999999888643
|
|
| >TIGR02075 pyrH_bact uridylate kinase | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.2e-20 Score=187.64 Aligned_cols=215 Identities=20% Similarity=0.169 Sum_probs=150.8
Q ss_pred CeEEEEeCCccCCCC-----C---hHHHHHHHHHHHHCCCeEEEEeCchHHHHHH-HHHcCCcccccCCccCCCHHHHHH
Q 007903 100 GTFVVIISGEIVSSP-----Y---LDPILKDIAFLHHLGIRFVLVPGTHVQIDKL-LSERGHEAKYLGRYRITDSESLAA 170 (585)
Q Consensus 100 k~iVIKlGGs~l~~~-----~---l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~-l~~~g~~~~~~~g~rvt~~~~l~~ 170 (585)
+++|||+|||+|+++ + ++++++.|+.+...|+++|||||||++.... .++++.... . ++.
T Consensus 2 ~~iViKlGGs~i~~~~~~~~~~~~i~~~a~~i~~~~~~~~~vviV~G~Gs~~~~~~a~~~~~~~~--------~---~d~ 70 (233)
T TIGR02075 2 KRVLLKLSGEALAGESGFGIDPDRLNRIANEIKELVKMGIEVGIVIGGGNIFRGVSAKELGIDRV--------T---ADY 70 (233)
T ss_pred CEEEEEeChhhcCCCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEECCCHHHHHHHHHhcCCCCc--------c---HHH
Confidence 689999999999852 1 6789999998888899999999999864332 355554321 1 122
Q ss_pred HHHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHHcC
Q 007903 171 AMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDG 250 (585)
Q Consensus 171 ~~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL~~ 250 (585)
.....-.++..++.. .|.++|++ ++.+++.+-. + .....+.+.++++|+.
T Consensus 71 ~g~~~~~l~~~l~~~--------~L~~~Gi~----a~~l~~~~~~-----~-------------~~~~~~~~~i~~ll~~ 120 (233)
T TIGR02075 71 MGMLATVINGLALRD--------ALEKLGVK----TRVLSAISMP-----Q-------------ICESYIRRKAIKHLEK 120 (233)
T ss_pred HHHHHHHHHHHHHHH--------HHHhCCCC----cEEeccccCC-----C-------------CccccCHHHHHHHHHC
Confidence 211222344444322 46888987 5666554311 0 0012346899999999
Q ss_pred CCeEEEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeec-ccccC-------CCCcccccccHHHHHHHHHhhchh
Q 007903 251 GCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIID-GPILD-------ESGHLIRFLTLQEADSLIRQRVKQ 322 (585)
Q Consensus 251 G~IPVi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTD-V~gl~-------~~~~lI~~it~~e~~~li~~~~~~ 322 (585)
|+|||+++. .| ...+++|.+|+.||..|+||+|+++|| |||++ +++++|++++.+|+... +.
T Consensus 121 g~VpV~~g~----~g-~~~~s~D~~a~~lA~~l~a~~li~~td~VdGvy~~dp~~~~~a~~i~~i~~~e~~~~---~~-- 190 (233)
T TIGR02075 121 GKVVIFSGG----TG-NPFFTTDTAAALRAIEINADVILKGTNGVDGVYTADPKKNKDAKKYETITYNEALKK---NL-- 190 (233)
T ss_pred CCEEEEECC----CC-CCCCCchHHHHHHHHHcCCCEEEEeecccCeEEcCCCCCCCCCeECcEecHHHHHhc---CH--
Confidence 999998743 12 236789999999999999999999999 99982 35889999997764321 11
Q ss_pred hhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccCcHH
Q 007903 323 SEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLS 402 (585)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~~ 402 (585)
..-
T Consensus 191 -----------------------------------------------------------------------------~~~ 193 (233)
T TIGR02075 191 -----------------------------------------------------------------------------KVM 193 (233)
T ss_pred -----------------------------------------------------------------------------HHH
Confidence 012
Q ss_pred HHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeec
Q 007903 403 ELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (585)
Q Consensus 403 kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~ 444 (585)
++.++..|.+.|++ ++|++|..++. |..++.++..||.|.
T Consensus 194 d~~~~~~a~~~~i~-v~i~~g~~~~~-l~~~l~g~~~GT~i~ 233 (233)
T TIGR02075 194 DLTAFALARDNNLP-IVVFNIDEPGA-LKKVILGKGIGTLVS 233 (233)
T ss_pred HHHHHHHHHHCCCe-EEEEeCCCcch-HHHHHCCCCCCEEeC
Confidence 45677778888997 89999999987 566677888999973
|
This protein, also called UMP kinase, converts UMP to UDP by adding a phosphate from ATP. It is the first step in pyrimidine biosynthesis. GTP is an allosteric activator. In a large fraction of all bacterial genomes, the gene tends to be located immediately downstream of elongation factor Ts and upstream of ribosome recycling factor. A related protein family, believed to be equivalent in function and found in the archaea and in spirochetes, is described by a separate model, TIGR02076. |
| >cd04253 AAK_UMPK-PyrH-Pf AAK_UMPK-PyrH-Pf: UMP kinase (UMPK)-Pf, the mostly archaeal uridine monophosphate kinase (uridylate kinase) enzymes that catalyze UMP phosphorylation and play a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway) | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.6e-20 Score=187.21 Aligned_cols=210 Identities=16% Similarity=0.144 Sum_probs=150.3
Q ss_pred eEEEEeCCccCCCC---C-hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHHHHHHh
Q 007903 101 TFVVIISGEIVSSP---Y-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAG 176 (585)
Q Consensus 101 ~iVIKlGGs~l~~~---~-l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~~~~~G 176 (585)
++||||||++++++ + ++++++.|+.+.+ |.++|||||||++++.+.+.... +.. +...++..-...-
T Consensus 1 ~iViKlGGs~l~~~~~~~~i~~~~~~i~~~~~-~~~iiiV~GgG~~a~~~~~~~~~-------~~~-~~~~~d~~g~~~~ 71 (221)
T cd04253 1 RIVISLGGSVLAPEKDADFIKEYANVLRKISD-GHKVAVVVGGGRLAREYISVARK-------LGA-SEAFLDEIGIMAT 71 (221)
T ss_pred CEEEEeccceeCCCCChHHHHHHHHHHHHHhC-CCEEEEEECCCHHHHHHHHHHHH-------cCC-CHHHHHHhcCHHH
Confidence 58999999999874 2 7888999988765 78999999999998876543210 001 1112333212233
Q ss_pred HHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHHcCCCeEEE
Q 007903 177 GIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVIL 256 (585)
Q Consensus 177 ~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL~~G~IPVi 256 (585)
.+|..+++.+ ..+|++ ++ .++.+.+.++|+.|.|||+
T Consensus 72 ~ln~~~~~~~---------l~~~~~----~~------------------------------~~~~~~~~~~l~~g~vpv~ 108 (221)
T cd04253 72 RLNARLLIAA---------LGDAYP----PV------------------------------PTSYEEALEAMFTGKIVVM 108 (221)
T ss_pred HHHHHHHHHH---------HhcCCC----cC------------------------------CCCHHHHHHHHHcCCeEEE
Confidence 6666666543 224432 11 1145677889999999999
Q ss_pred cCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC-------CCCcccccccHHHHHHHHHhhchhhhHHHHH
Q 007903 257 SNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIAANY 329 (585)
Q Consensus 257 ~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~-------~~~~lI~~it~~e~~~li~~~~~~~~~~~~~ 329 (585)
.+... ++++|.+|+.+|.+|+||+|+++|||+|++ +++++|++++.+|++++....
T Consensus 109 ~G~~~-------~~s~D~~a~~lA~~l~a~~li~~tdVdGVy~~dP~~~~~a~~i~~i~~~e~~~~~~~~---------- 171 (221)
T cd04253 109 GGTEP-------GQSTDAVAALLAERLGADLLINATNVDGVYSKDPRKDPDAKKFDRLSADELIDIVGKS---------- 171 (221)
T ss_pred ECCCC-------CCccHHHHHHHHHHcCCCEEEEEeCCCeeECCCCCCCCCCeEeeEeCHHHHHHHccCC----------
Confidence 97531 357899999999999999999999999983 358999999988877764220
Q ss_pred HhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccCcHHHHHHHHH
Q 007903 330 VKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAF 409 (585)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~~kl~aa~~ 409 (585)
.+..|++ |..++.++..
T Consensus 172 ------------------------------------------~~~~g~~---------------------~~~d~~a~~~ 188 (221)
T cd04253 172 ------------------------------------------SWKAGSN---------------------EPFDPLAAKI 188 (221)
T ss_pred ------------------------------------------CcCCCCC---------------------cchHHHHHHH
Confidence 0112311 4567888999
Q ss_pred HHHcCCCeEEEecCccchhhHHHHHhcCCCceeec
Q 007903 410 VCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (585)
Q Consensus 410 a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~ 444 (585)
+.+.|++ ++|++|..++. |.+++.++..||.|.
T Consensus 189 ~~~~gi~-~~I~~g~~p~~-l~~~l~g~~~GT~I~ 221 (221)
T cd04253 189 IERSGIK-TIVVDGRDPEN-LERALKGEFVGTIIE 221 (221)
T ss_pred HHHCCCe-EEEECCCCccH-HHHHHCCCCCCeEeC
Confidence 9999997 89999999987 678888888999873
|
The UMP kinase of Pyrococcus furiosus (Pf) is known to function as a homohexamer, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial UMPKs have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs (this CD) appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Members of thi |
| >TIGR02076 pyrH_arch uridylate kinase, putative | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.5e-20 Score=187.23 Aligned_cols=210 Identities=16% Similarity=0.148 Sum_probs=148.2
Q ss_pred EEEEeCCccCCCC---C-hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHHHHHHhH
Q 007903 102 FVVIISGEIVSSP---Y-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGG 177 (585)
Q Consensus 102 iVIKlGGs~l~~~---~-l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~~~~~G~ 177 (585)
+|||+||++++++ + +.+++++|+.+.+. +++|||||||.+++.+++.. ..+ .. ....++..-...-+
T Consensus 1 iViKlGGs~l~~~~~~~~i~~i~~~i~~~~~~-~~viiV~ggG~~a~~~~~~~---~~~----~~-~~~~~~~~g~~~~~ 71 (221)
T TIGR02076 1 IVISLGGSVLSPEIDAEFIKEFANILRKLSDE-HKVGVVVGGGKTARRYIGVA---REL----GA-SETFLDEIGIDATR 71 (221)
T ss_pred CEEEechhhcCCCCCHHHHHHHHHHHHHHHhC-CeEEEEECCcHHHHHHHHHH---HHc----CC-CHHHHHHhhhHHHH
Confidence 5999999999885 2 78999999998876 89999999999876543211 100 01 22233333223346
Q ss_pred HHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHHcCCCeEEEc
Q 007903 178 IRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILS 257 (585)
Q Consensus 178 i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL~~G~IPVi~ 257 (585)
+|..+++.| |...+++. + ..+.....++|+.|.|||+.
T Consensus 72 ln~~~l~~l--------l~~~~~~~----~------------------------------~~~~~~~~~~l~~g~ipv~~ 109 (221)
T TIGR02076 72 LNAMLLIAA--------LGDDAYPK----V------------------------------PENFEEALEAMSLGKIVVMG 109 (221)
T ss_pred HHHHHHHHH--------HHhcCCCC----c------------------------------CCCHHHHHHHHHcCCEEEEc
Confidence 676666543 33344431 0 01233446688889999998
Q ss_pred CCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC-------CCCcccccccHHHHHHHHHhhchhhhHHHHHH
Q 007903 258 NLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIAANYV 330 (585)
Q Consensus 258 ~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~-------~~~~lI~~it~~e~~~li~~~~~~~~~~~~~~ 330 (585)
+.. . .+++|++|+++|.+|+||+|+++|||||++ +++++|++++.+|++++..++
T Consensus 110 G~~---~----~~s~D~~A~~lA~~l~A~~li~ltdVdGvy~~dP~~~~~a~~i~~i~~~e~~~~~~~~----------- 171 (221)
T TIGR02076 110 GTH---P----GHTTDAVAALLAEFSKADLLINATNVDGVYDKDPKKDPDAKKFDKLTPEELVEIVGSS----------- 171 (221)
T ss_pred CCC---C----CCCcHHHHHHHHHHcCCCEEEEEeCCCcccCCCCCCCCCCeEeeEECHHHHHHHhcCC-----------
Confidence 742 1 368999999999999999999999999983 368999999988877765321
Q ss_pred hhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccCcHHHHHHHHHH
Q 007903 331 KAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFV 410 (585)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~~kl~aa~~a 410 (585)
.+++| .| |..|+.++..+
T Consensus 172 -----------------------------------------~~~~g-~~--------------------~~~~~~a~~~~ 189 (221)
T TIGR02076 172 -----------------------------------------SVKAG-SN--------------------EVVDPLAAKII 189 (221)
T ss_pred -----------------------------------------CccCC-CC--------------------ceeHHHHHHHH
Confidence 12223 11 56688888888
Q ss_pred HHcCCCeEEEecCccchhhHHHHHhcCCCceeec
Q 007903 411 CRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (585)
Q Consensus 411 ~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~ 444 (585)
.+.|++ ++|++|..++.|+ .++.++..||.|.
T Consensus 190 ~~~~i~-v~I~~g~~~~~l~-~~l~g~~~GT~i~ 221 (221)
T TIGR02076 190 ERSKIR-TIVVNGRDPENLE-KVLKGEHVGTIIE 221 (221)
T ss_pred HHCCCc-EEEECCCCccHHH-HHHCCCCCCeEeC
Confidence 888886 8999999999854 6777888899873
|
This family consists of the archaeal and spirochete proteins most closely related to bacterial uridylate kinases (TIGR02075), an enzyme involved in pyrimidine biosynthesis. Members are likely, but not known, to be functionally equivalent to their bacterial counterparts. However, substantial sequence differences suggest that regulatory mechanisms may be different; the bacterial form is allosterically regulated by GTP. |
| >TIGR00657 asp_kinases aspartate kinase | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.6e-19 Score=195.85 Aligned_cols=197 Identities=17% Similarity=0.185 Sum_probs=148.0
Q ss_pred eEEEEeCCccCCCCC-hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCc-------------------
Q 007903 101 TFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRY------------------- 160 (585)
Q Consensus 101 ~iVIKlGGs~l~~~~-l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~------------------- 160 (585)
++|+|+||+.+.+.+ +..+++.|......|+++|+|||+.+.+...|.++.....+..+.
T Consensus 2 ~~V~KFGGssv~~~~~~~~v~~~i~~~~~~~~~~vvVvSA~~~~Td~L~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 81 (441)
T TIGR00657 2 LIVQKFGGTSVGNAERIRRVAKIVLKEKKKGNQVVVVVSAMAGVTDALVELAEQASPGPSKEFLEKIREKHIEILERLIP 81 (441)
T ss_pred CEEEEeCcccCCCHHHHHHHHHHHHHHHhcCCCEEEEEcCCCCCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhhh
Confidence 579999999999876 889999998887889999999999877877776665433222110
Q ss_pred --------cCCCHH--------HHHHHHHHHh-HHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeecc
Q 007903 161 --------RITDSE--------SLAAAMEAAG-GIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKG 223 (585)
Q Consensus 161 --------rvt~~~--------~l~~~~~~~G-~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g 223 (585)
+.++.. ..+. ..+.| +++..++.. .|+++|++ ++++++.+..+++..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~d~-ils~GE~~s~~l~~~--------~l~~~Gi~----a~~l~~~~~~l~t~~--- 145 (441)
T TIGR00657 82 QAIAEELKRLLDAELVLEEKPREMDR-ILSFGERLSAALLSA--------ALEELGVK----AVSLLGGEAGILTDS--- 145 (441)
T ss_pred HHHHHHHHHHHHHHHhhhcCcchHhh-eecHHHHHHHHHHHH--------HHHhCCCC----CEEEEcCcceEEecC---
Confidence 000000 0111 12445 344444443 57899987 789999987777654
Q ss_pred ccccccCcceeeEEEecHHHHHHHHcCCCeEEEcC-CccCCCCceeee---ChHHHHHHHHHHcCCCEEEEeecccccC-
Q 007903 224 VVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSN-LGYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPILD- 298 (585)
Q Consensus 224 ~~~g~d~g~~G~v~~v~~~~I~~lL~~G~IPVi~~-v~~~~~G~~~ni---d~D~lAa~lA~~L~AdkLIilTDV~gl~- 298 (585)
+|+....+..++.+.|+.+++.|.|||+++ ++.+.+|++.++ ++|.+|+.+|.+|+||+|+++|||||++
T Consensus 146 -----~~~~~~~~~~~~~~~l~~~l~~~~vpVv~G~~g~~~~g~~~~lgrggsD~~A~~lA~~l~a~~l~~~tDV~Gv~~ 220 (441)
T TIGR00657 146 -----NFGRARVIIEILTERLEPLLEEGIIPVVAGFQGATEKGETTTLGRGGSDYTAALLAAALKADECEIYTDVDGIYT 220 (441)
T ss_pred -----CCCceeecHhhhHHHHHHHHhcCCEEEEeCcEeeCCCCCEeecCCCchHHHHHHHHHHcCCCEEEEEECCCCCCc
Confidence 233222456778999999999999999999 578888998887 8999999999999999999999999983
Q ss_pred --C----CCcccccccHHHHHHHHHh
Q 007903 299 --E----SGHLIRFLTLQEADSLIRQ 318 (585)
Q Consensus 299 --~----~~~lI~~it~~e~~~li~~ 318 (585)
| +++++++++.+|+.+++..
T Consensus 221 ~DP~~~~~a~~i~~is~~ea~el~~~ 246 (441)
T TIGR00657 221 TDPRIVPDARRIDEISYEEMLELASF 246 (441)
T ss_pred CCCCCCCCCeECCccCHHHHHHHHhc
Confidence 3 6899999999999888643
|
The Lys-sensitive enzyme of Bacillus subtilis resembles the E. coli form but is an alpha 2/beta 2 heterotetramer, where the beta subunit is translated from an in-phase alternative initiator at Met-246. This may be a feature of a number of closely related forms, including a paralog from B. subtilis. |
| >cd04240 AAK_UC AAK_UC: Uncharacterized (UC) amino acid kinase-like proteins found mainly in archaea and a few bacteria | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.8e-19 Score=174.15 Aligned_cols=149 Identities=19% Similarity=0.198 Sum_probs=105.9
Q ss_pred EEEeCCccCCCCChHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHH---HcCCcccccCCccCCCHHHHHHHHHHHhHHH
Q 007903 103 VVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLS---ERGHEAKYLGRYRITDSESLAAAMEAAGGIR 179 (585)
Q Consensus 103 VIKlGGs~l~~~~l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~---~~g~~~~~~~g~rvt~~~~l~~~~~~~G~i~ 179 (585)
|||+|||.+.+ +..+.+.+..+. |.+++||.|||++++.+.. ++|++ ....+.+...+..+|
T Consensus 1 vvKiGGsl~~~--~~~~~~~l~~~~--~~~v~iV~GGG~~A~~~r~~~~~~g~~-----------~~~ad~mgilat~~n 65 (203)
T cd04240 1 VVKIGGSLIRE--AVRLLRWLKTLS--GGGVVIVPGGGPFADVVRRYQERKGLS-----------DAAAHWMAILAMEQY 65 (203)
T ss_pred CEEEccccccc--HHHHHHHHHhcc--CCCEEEEcCCcHHHHHHHHHHHHcCCC-----------hHHHHHHHHHHHHHH
Confidence 79999999865 566777666553 8999999999999766543 33332 223332212223334
Q ss_pred HHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHHcCCCeEEEcCC
Q 007903 180 MMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL 259 (585)
Q Consensus 180 ~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL~~G~IPVi~~v 259 (585)
-.+.+.. . + .. ..-+.+.+.+++..|.|||+.|.
T Consensus 66 a~~l~~~------------~-~-------------~~--------------------~~~~~~~~~~~~~~g~ipV~~P~ 99 (203)
T cd04240 66 GYLLADL------------E-P-------------RL--------------------VARTLAELTDVLERGKIAILLPY 99 (203)
T ss_pred HHHHhcc------------C-C-------------cc--------------------ccCCHHHHHHHHHCCCcEEEeCc
Confidence 3232211 0 0 00 01145788899999999999998
Q ss_pred cc----CCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC-CCCcccccccHHHH
Q 007903 260 GY----SSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-ESGHLIRFLTLQEA 312 (585)
Q Consensus 260 ~~----~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~-~~~~lI~~it~~e~ 312 (585)
++ +..++.+|+|+|++|+++|.+|+|++||++|||||++ .+++++++++.+|+
T Consensus 100 ~~~~~~~~~~~~~~~ttD~lAa~lA~~l~A~~Li~ltdVdGVy~~da~~i~~i~~~e~ 157 (203)
T cd04240 100 RLLLDTDPLPHSWEVTSDSIAAWLAKKLGAKRLVIVTDVDGIYEKDGKLVNEIAAAEL 157 (203)
T ss_pred hhhcccCCCCcccccCHHHHHHHHHHHcCCCEEEEEeCCccccCCCCcCccccCHHHh
Confidence 65 5567789999999999999999999999999999985 56999999987654
|
Sequences in this CD are members of the Amino Acid Kinase (AAK) superfamily. |
| >PRK14557 pyrH uridylate kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=4e-18 Score=172.26 Aligned_cols=218 Identities=18% Similarity=0.212 Sum_probs=150.1
Q ss_pred CCeEEEEeCCccCCCCC--------hHHHHHHHHHHHHCCCeEEEEeCchHHH-HHHHHHcCCcccccCCccCCCHHHHH
Q 007903 99 GGTFVVIISGEIVSSPY--------LDPILKDIAFLHHLGIRFVLVPGTHVQI-DKLLSERGHEAKYLGRYRITDSESLA 169 (585)
Q Consensus 99 ~k~iVIKlGGs~l~~~~--------l~~l~~~Ia~L~~~G~~vVlVhGgg~~i-~~~l~~~g~~~~~~~g~rvt~~~~l~ 169 (585)
.+++||||||+++.+++ ++.+++.|+.+.+.|++++||||||... +...+++++. ...++
T Consensus 4 ~~riViKlGG~al~~~~~~~~~~~~i~~~a~~i~~~~~~g~~vvVVvGgGn~~rg~~a~~~~~~-----------~~~~D 72 (247)
T PRK14557 4 YKRVLIKLSGGALADQTGNSFNSKRLEHIANEILSIVDLGIEVSIVIGGGNIFRGHLAEEWGID-----------RVEAD 72 (247)
T ss_pred ccEEEEEeCceeECCCCCCCcCHHHHHHHHHHHHHHHHcCCeEEEEECCcHHHHHHHHHhcCCC-----------hHHHH
Confidence 47999999999998732 7889999999989999999999998643 3455555432 22344
Q ss_pred HHHHHHhHHHHHHHHhhCCCCCchhHHhc-CCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHH
Q 007903 170 AAMEAAGGIRMMIEAKLSPGPPICNIRRH-GDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERL 248 (585)
Q Consensus 170 ~~~~~~G~i~~~L~~~L~~~~~~~~l~~~-Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL 248 (585)
.+.....++|..+.+. .|+.. +.. ++ +++.. .|. .....+....+.+.|
T Consensus 73 ~ig~~g~~lna~ll~~--------~l~~~~~~~-----~~-------i~t~~--------~~~--~~~~~~~~~~~~~~l 122 (247)
T PRK14557 73 NIGTLGTIINSLMLRG--------VLTSKTNKE-----VR-------VMTSI--------PFN--AVAEPYIRLRAVHHL 122 (247)
T ss_pred HHHHHHHHHHHHHHHH--------HHHhhhCCc-----ee-------EEecc--------ccc--cccchhhHHHHHHHH
Confidence 4434555666655543 23332 222 11 12211 111 111233445577779
Q ss_pred cCCCeEEEcCC-ccCCCCceeeeChHHHHHHHHHHcCCCEEEEe-eccccc---C----CCCcccccccHHHHHHHHHhh
Q 007903 249 DGGCLVILSNL-GYSSSGEVLNCNTYEVATACALAIEADKLICI-IDGPIL---D----ESGHLIRFLTLQEADSLIRQR 319 (585)
Q Consensus 249 ~~G~IPVi~~v-~~~~~G~~~nid~D~lAa~lA~~L~AdkLIil-TDV~gl---~----~~~~lI~~it~~e~~~li~~~ 319 (585)
++|.|||+++. +. -.+++|++|+.+|.+++||.|+++ |||||+ | |++++|++++..|+ +..+
T Consensus 123 ~~g~VvV~~G~~g~------~~~stD~lAallA~~l~Ad~li~~ttdVdGvY~~DP~~~~~Ak~i~~i~~~e~---~~~~ 193 (247)
T PRK14557 123 DNGYIVIFGGGNGQ------PFVTTDYPSVQRAIEMNSDAILVAKQGVDGVFTSDPKHNKSAKMYRKLNYNDV---VRQN 193 (247)
T ss_pred hCCCEEEEECCcCC------CccChHHHHHHHHHHhCCCEEEEecCCcCEeECCCCCCCCCCEEeeEEChhhh---cccC
Confidence 99999999863 32 245799999999999999999999 599998 3 36899999997654 1111
Q ss_pred chhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccC
Q 007903 320 VKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNG 399 (585)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~ 399 (585)
. . -
T Consensus 194 ~-------------------------------------------------------~-~--------------------- 196 (247)
T PRK14557 194 I-------------------------------------------------------Q-V--------------------- 196 (247)
T ss_pred H-------------------------------------------------------H-H---------------------
Confidence 0 0 0
Q ss_pred cHHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeecccc
Q 007903 400 YLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDL 447 (585)
Q Consensus 400 m~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~~d~ 447 (585)
|. ..|+..|.+.|++ ++|+||..++. |..++.++..||.|.+..
T Consensus 197 ~~--~~A~~~a~~~gi~-v~I~ng~~~~~-l~~~l~g~~~GT~i~~~~ 240 (247)
T PRK14557 197 MD--QAALLLARDYNLP-AHVFNFDEPGV-MRRICLGEHVGTLINDDA 240 (247)
T ss_pred HH--HHHHHHHHHCCCc-EEEEeCCCChH-HHHHHcCCCCcEEEecCc
Confidence 22 2477888899997 89999999987 667778888999998653
|
|
| >PRK14556 pyrH uridylate kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=7e-17 Score=162.11 Aligned_cols=218 Identities=19% Similarity=0.190 Sum_probs=150.4
Q ss_pred CCeEEEEeCCccCCCCC--------hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHH
Q 007903 99 GGTFVVIISGEIVSSPY--------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAA 170 (585)
Q Consensus 99 ~k~iVIKlGGs~l~~~~--------l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~ 170 (585)
-|++|+||+|+++..++ +..++++|+.+.+.|+++.||-|||....-...+.+ .| .+....|.
T Consensus 15 ~~rvllKlsGe~l~~~~~~~~d~~~~~~~a~~i~~~~~~g~~i~iVvGGGni~Rg~~~~~~------~~---~~r~~~D~ 85 (249)
T PRK14556 15 LKRILLKLSGESLSADQGFGINVESAQPIINQIKTLTNFGVELALVVGGGNILRGGRANFG------NK---IRRATADS 85 (249)
T ss_pred hCEEEEEEehhhCcCCCCCCcCHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHhCchhhcc------CC---CchhhhhH
Confidence 47899999999997542 789999999999999999999999987653222211 01 12223333
Q ss_pred HHHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHHcC
Q 007903 171 AMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDG 250 (585)
Q Consensus 171 ~~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL~~ 250 (585)
+-.++..+|..+... .|.+.|+++++ ++...- . .+ ....+.+.+.+.|+.
T Consensus 86 ~GmlaT~iNal~l~~--------~l~~~~~~~~v----~sa~~~---~----------~~-----~e~~~~~~~~~~l~~ 135 (249)
T PRK14556 86 MGMIATMINALALRD--------MLISEGVDAEV----FSAKGV---D----------GL-----LKVASAHEFNQELAK 135 (249)
T ss_pred HHHHHHHHHHHHHHH--------HHHHcCCCeEE----eecccc---C----------cC-----CCCCCHHHHHHHHhC
Confidence 333555677654432 46778887322 111110 0 00 112367788889999
Q ss_pred CCeEEEcC-CccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC-------CCCcccccccHHHHHHHHHhhchh
Q 007903 251 GCLVILSN-LGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQ 322 (585)
Q Consensus 251 G~IPVi~~-v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~-------~~~~lI~~it~~e~~~li~~~~~~ 322 (585)
|.|||+.+ .+. -.+++|++|+.+|..++||.|+++|||||++ |+++++++++..|... .+.
T Consensus 136 g~vvi~~gg~G~------p~~StD~lAallA~~l~Ad~Lii~TdVDGVYd~DP~~~p~A~~i~~I~~~e~~~---~~l-- 204 (249)
T PRK14556 136 GRVLIFAGGTGN------PFVTTDTTASLRAVEIGADALLKATTVNGVYDKDPNKYSDAKRFDKVTFSEVVS---KEL-- 204 (249)
T ss_pred CCEEEEECCCCC------CcCCcHHHHHHHHHHcCCCEEEEEeCCCccCCCCCCCCCCceEeeEEchhhhcc---cch--
Confidence 99999765 332 2457899999999999999999999999983 3578888887655321 100
Q ss_pred hhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccCcHH
Q 007903 323 SEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLS 402 (585)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~~ 402 (585)
. ..
T Consensus 205 -------------------------------------------------------~----------------------vm 207 (249)
T PRK14556 205 -------------------------------------------------------N----------------------VM 207 (249)
T ss_pred -------------------------------------------------------H----------------------hH
Confidence 0 11
Q ss_pred HHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeecc
Q 007903 403 ELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (585)
Q Consensus 403 kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~~ 445 (585)
...|+..+.+.|++ ++|+|+.+++. |..++.++..||+|.-
T Consensus 208 d~~A~~~a~~~gIp-i~I~ng~~~~~-L~~~l~Ge~~GT~i~~ 248 (249)
T PRK14556 208 DLGAFTQCRDFGIP-IYVFDLTQPNA-LVDAVLDSKYGTWVTL 248 (249)
T ss_pred HHHHHHHHHHCCCc-EEEECCCCchH-HHHHHcCCCCceEEEe
Confidence 24477778899998 89999999997 5677788889999864
|
|
| >cd04244 AAK_AK-LysC-like AAK_AK-LysC-like: Amino Acid Kinase Superfamily (AAK), AK-LysC-like; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine-sensitive AK isoenzyme found in higher plants | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.1e-16 Score=166.06 Aligned_cols=199 Identities=16% Similarity=0.140 Sum_probs=130.1
Q ss_pred eEEEEeCCccCCCCC-hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCccc------c---c-----------CC
Q 007903 101 TFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAK------Y---L-----------GR 159 (585)
Q Consensus 101 ~iVIKlGGs~l~~~~-l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~------~---~-----------~g 159 (585)
++|.|+||+.+.+++ +..+++-|... ..+.++|+|.++-..+...|.++..... + . ..
T Consensus 1 ~~V~KFGGtSv~~~~~~~~v~~iI~~~-~~~~~~vvVvSA~~~iTd~L~~~~~~~~~~~~~~~~~~l~~i~~~h~~~~~~ 79 (298)
T cd04244 1 RLVMKFGGTSVGSAERIRHVADLVGTY-AEGHEVVVVVSAMGGVTDRLLLAAEAAVSGRIAGVKDFIEILRLRHIKAAKE 79 (298)
T ss_pred CEEEEECcccCCCHHHHHHHHHHHHHh-hcCCCEEEEEeCCCCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHH
Confidence 479999999999865 67777766654 4578899999874334444433211000 0 0 00
Q ss_pred c---------------------------c---CCCHHHHHHHHHHHhHH-HHHHHHhhCCCCCchhHHhcCCCCcceeEE
Q 007903 160 Y---------------------------R---ITDSESLAAAMEAAGGI-RMMIEAKLSPGPPICNIRRHGDSSRWHEVG 208 (585)
Q Consensus 160 ~---------------------------r---vt~~~~l~~~~~~~G~i-~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~ 208 (585)
+ . -.++...+. ..+.|+. +..|++. .|+++|++ +..
T Consensus 80 l~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~d~-i~s~GE~lSa~lla~--------~L~~~Gi~----a~~ 146 (298)
T cd04244 80 AISDEEIAEVESIIDSLLEELEKLLYGIAYLGELTPRSRDY-IVSFGERLSAPIFSA--------ALRSLGIK----ARA 146 (298)
T ss_pred hhcchhhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchHhhH-hccHhHHHHHHHHHH--------HHHhCCCC----eEE
Confidence 0 0 000011111 1234443 3334443 57899988 788
Q ss_pred eeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHHcCCCeEEEcC-CccCCCCceeee---ChHHHHHHHHHHcC
Q 007903 209 VSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSN-LGYSSSGEVLNC---NTYEVATACALAIE 284 (585)
Q Consensus 209 l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL~~G~IPVi~~-v~~~~~G~~~ni---d~D~lAa~lA~~L~ 284 (585)
+++.|..+++....+ + ....++....++ ..+..+++.|.|||+++ ++.+.+|++.++ ++|.+|+.+|.+|+
T Consensus 147 l~~~~~~i~t~~~~~--~--a~~~~~~~~~i~-~~l~~ll~~~~vpVv~Gfig~~~~g~~ttlgRggsD~~A~~~A~~l~ 221 (298)
T cd04244 147 LDGGEAGIITDDNFG--N--ARPLPATYERVR-KRLLPMLEDGKIPVVTGFIGATEDGAITTLGRGGSDYSATIIGAALD 221 (298)
T ss_pred EcHHHcceeecCccc--c--cccchhHHHHHH-HHHHHHhhcCCEEEEeCccccCCCCCEEEecCCChHHHHHHHHHHcC
Confidence 888887666643211 0 000012222222 24567889999999999 588889999988 99999999999999
Q ss_pred CCEEEEeecccccC---C----CCcccccccHHHHHHHHHh
Q 007903 285 ADKLICIIDGPILD---E----SGHLIRFLTLQEADSLIRQ 318 (585)
Q Consensus 285 AdkLIilTDV~gl~---~----~~~lI~~it~~e~~~li~~ 318 (585)
||+|+++|||||++ | ++++|++++.+|+.++...
T Consensus 222 a~~l~i~tdV~Gv~~~dP~~~~~a~~i~~lsy~Ea~el~~~ 262 (298)
T cd04244 222 ADEIWIWKDVDGVMTADPRIVPEARTIPRLSYAEAMELAYF 262 (298)
T ss_pred CCEEEEEECCCCCCCCCCCCCCCCeEcCccCHHHHHHHHhC
Confidence 99999999999983 3 6899999999999998643
|
The lysine-sensitive AK isoenzyme is a monofunctional protein. It is involved in the overall regulation of the aspartate pathway and can be synergistically inhibited by S-adenosylmethionine. Also included in this CD is an uncharacterized LysC-like AK found in Euryarchaeota and some bacteria. AK catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. |
| >COG1246 ArgA N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.69 E-value=6.9e-17 Score=148.99 Aligned_cols=122 Identities=34% Similarity=0.649 Sum_probs=111.9
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHHhccCeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCCcCC
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQ 528 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGk 528 (585)
++||+|+.+|++.|.+|+.++..++.+.+++.+.++..+..|++++.+|+++||+.++++.+.+.+++.+++|+|+|||+
T Consensus 1 ~~iR~A~~~Di~~I~~Li~~~~~~gil~~rs~~~le~~i~dF~i~E~~g~viGC~aL~~~~~~~~gE~~~laV~pd~r~~ 80 (153)
T COG1246 1 EQIRKARISDIPAILELIRPLELQGILLRRSREQLEEEIDDFTIIERDGKVIGCAALHPVLEEDLGELRSLAVHPDYRGS 80 (153)
T ss_pred CceeeccccchHHHHHHHHHHhhccccchhhHHHHHHHHhhheeeeeCCcEEEEEeecccCccCeeeEEEEEECHHhcCC
Confidence 36999999999999999999999999999999999999999999999999999999997778899999999999999999
Q ss_pred cHHHHHHHHHHhhhHHHHHHcCCcccCcccee-cccccccccCeeecCc
Q 007903 529 GQGDKLLGLCIWPLLSETRYDHISTNGFPFLR-GRTHSYYRLKFNCSSK 576 (585)
Q Consensus 529 GIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~-~~a~~YYrlGF~~~~~ 576 (585)
|+|..|+++++ ..|+++|+++. | .+. ..+++|.++||+..+.
T Consensus 81 G~G~~Ll~~~~----~~Ar~~gi~~l-f-~LTt~~~~~F~~~GF~~vd~ 123 (153)
T COG1246 81 GRGERLLERLL----ADARELGIKEL-F-VLTTRSPEFFAERGFTRVDK 123 (153)
T ss_pred CcHHHHHHHHH----HHHHHcCCcee-e-eeecccHHHHHHcCCeECcc
Confidence 99999999999 99999999874 2 233 5677888999998865
|
|
| >PRK06291 aspartate kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.6e-15 Score=167.05 Aligned_cols=195 Identities=16% Similarity=0.154 Sum_probs=131.8
Q ss_pred eEEEEeCCccCCCCC-hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCccc-------c----------------
Q 007903 101 TFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAK-------Y---------------- 156 (585)
Q Consensus 101 ~iVIKlGGs~l~~~~-l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~-------~---------------- 156 (585)
++|.|+||+.+.+.+ ++.+++-|......|.++|+|.++-..+...|.++..... +
T Consensus 2 ~~V~KFGGtSv~~~~~~~~v~~ii~~~~~~~~~~vvVvSA~~~~Td~L~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 81 (465)
T PRK06291 2 RLVMKFGGTSVGDGERIRHVAKLVKRYRSEGNEVVVVVSAMTGVTDALLEIAEQALDVRDIAKVKDFIADLRERHYKAIE 81 (465)
T ss_pred cEEEEeCcccCCCHHHHHHHHHHHHHHHhcCCCEEEEEcCCCCCHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHH
Confidence 479999999999865 7777777766555788999998874334333322110000 0
Q ss_pred ---c-----------------------CCc---cCCCHHHHHHHHHHHhHH-HHHHHHhhCCCCCchhHHhcCCCCccee
Q 007903 157 ---L-----------------------GRY---RITDSESLAAAMEAAGGI-RMMIEAKLSPGPPICNIRRHGDSSRWHE 206 (585)
Q Consensus 157 ---~-----------------------~g~---rvt~~~~l~~~~~~~G~i-~~~L~~~L~~~~~~~~l~~~Gi~~~~~a 206 (585)
. .+. +-.++...+. ..+.|+. +..|+.. .|+++|++ +
T Consensus 82 ~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~-i~s~GE~~Sa~l~~~--------~L~~~Gi~----a 148 (465)
T PRK06291 82 EAIKDPDIREEVSKTIDSRIEELEKALVGVSYLGELTPRSRDY-ILSFGERLSAPILSG--------ALRDLGIK----S 148 (465)
T ss_pred HhhcChhhHHHHHHHHHHHHHHHHHHHHHHHHhccCChHHHHH-HHhhhHHHHHHHHHH--------HHHhCCCC----e
Confidence 0 000 0001222222 2344543 4444443 57889988 7
Q ss_pred EEeeecCcceeeeeeccccccccCcceeeE--EEec-HHHHHHHHcCCCeEEEcC-CccCCCCceeee---ChHHHHHHH
Q 007903 207 VGVSVASGNFLAAKRKGVVDGVDYGATGEV--KKVD-VTRMRERLDGGCLVILSN-LGYSSSGEVLNC---NTYEVATAC 279 (585)
Q Consensus 207 v~l~~~dg~~~~a~~~g~~~g~d~g~~G~v--~~v~-~~~I~~lL~~G~IPVi~~-v~~~~~G~~~ni---d~D~lAa~l 279 (585)
..+++.|..+++... |+..+.. +.-. .+.++.+++.|.|||+++ ++.+.+|++.++ ++|.+|+.+
T Consensus 149 ~~l~~~~~~i~t~~~--------~~~~~~~~~~~~~~~~~~~~ll~~~~vpVv~Gfig~~~~g~~~tlgrggsD~~A~~~ 220 (465)
T PRK06291 149 VALTGGEAGIITDSN--------FGNARPLPKTYERVKERLEPLLKEGVIPVVTGFIGETEEGIITTLGRGGSDYSAAII 220 (465)
T ss_pred EEEchHHCcEEecCC--------CCceeechhhHHHHHHHHHHHhhcCcEEEEeCcEEcCCCCCEEEecCCChHHHHHHH
Confidence 888888876776542 2222211 0001 246888999999999999 588889999988 999999999
Q ss_pred HHHcCCCEEEEeecccccC-------CCCcccccccHHHHHHHH
Q 007903 280 ALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLI 316 (585)
Q Consensus 280 A~~L~AdkLIilTDV~gl~-------~~~~lI~~it~~e~~~li 316 (585)
|.+|+||.|+++|||||++ |++++|++++.+|+.++.
T Consensus 221 A~~l~a~~~~i~tdV~Gi~~~dP~~~~~a~~i~~l~~~ea~~l~ 264 (465)
T PRK06291 221 GAALDADEIWIWTDVDGVMTTDPRIVPEARVIPKISYIEAMELS 264 (465)
T ss_pred HHhcCCCEEEEEECCCCCCCCCCCCCCCCeEccccCHHHHHHHH
Confidence 9999999999999999983 368999999999988875
|
|
| >COG0527 LysC Aspartokinases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.66 E-value=7.2e-15 Score=159.78 Aligned_cols=199 Identities=16% Similarity=0.145 Sum_probs=142.4
Q ss_pred CeEEEEeCCccCCCCC-hHHHHHHHHHHHHCCCeEEEEeCchH-HHHHHHHHcCCcc----------------cccCC--
Q 007903 100 GTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHV-QIDKLLSERGHEA----------------KYLGR-- 159 (585)
Q Consensus 100 k~iVIKlGGs~l~~~~-l~~l~~~Ia~L~~~G~~vVlVhGgg~-~i~~~l~~~g~~~----------------~~~~g-- 159 (585)
+++|.|+||+.+.+.+ ++..++-|+...+.|.++|+|.+++. ..+.+++...... .....
T Consensus 2 ~~iV~KFGGTSva~~e~i~~va~iv~~~~~~g~~vVVVvSA~~~vTd~Lv~~a~~~~~~~~~~~~~~~~~~~~el~~~~~ 81 (447)
T COG0527 2 RLIVQKFGGTSVADAERILRVADIVKEDSEEGVKVVVVVSAMGGVTDLLVALAEGAESGRDAVAEQRHRDIASELILDPF 81 (447)
T ss_pred ceEEEEeCCcccCCHHHHHHHHHHHHhhhhcCCcEEEEECCCCCchHHHHHHHhhcccccchhHHHHHHHHHHHHhhcch
Confidence 3799999999999866 88889988888888999999999876 3444433332100 00000
Q ss_pred ---------------------ccCCCHHHHHHHHHHHhH-HHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCccee
Q 007903 160 ---------------------YRITDSESLAAAMEAAGG-IRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFL 217 (585)
Q Consensus 160 ---------------------~rvt~~~~l~~~~~~~G~-i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~ 217 (585)
....++..++.+ .+.|+ ++..|+++ .|+..|++ +..+++.+..+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~i-lS~GE~~Sa~lla~--------~L~~~Gv~----A~~~~~~~~~i~ 148 (447)
T COG0527 82 IAARLAEVIAEFKKVLLGIALLGEVSPRERDEL-LSLGERLSAALLAA--------ALNALGVD----ARSLDGRQAGIA 148 (447)
T ss_pred hhhhHhhhHhhhhHHhhhhhhccCCCHHHHHHH-HhhchHHHHHHHHH--------HHHhCCCc----eEEEchHHceee
Confidence 011233444443 34555 34445554 58899988 666666554444
Q ss_pred eeeeccccccccCcceeeEEEecHHH-HHHHHcCCCeEEEcCC-ccCCCCceeee---ChHHHHHHHHHHcCCCEEEEee
Q 007903 218 AAKRKGVVDGVDYGATGEVKKVDVTR-MRERLDGGCLVILSNL-GYSSSGEVLNC---NTYEVATACALAIEADKLICII 292 (585)
Q Consensus 218 ~a~~~g~~~g~d~g~~G~v~~v~~~~-I~~lL~~G~IPVi~~v-~~~~~G~~~ni---d~D~lAa~lA~~L~AdkLIilT 292 (585)
+.. .|+ ..++.....+. +..+++.|.|||++++ |.+++|++..+ .+|..|+.||.+|+||.+.+.|
T Consensus 149 t~~--------~~~-~a~i~~~~~~~~l~~~~~~~~v~Vv~GF~G~~~~G~~tTLGRGGSD~SA~~laa~l~Ad~~~I~T 219 (447)
T COG0527 149 TDS--------NHG-NARILDEDSERRLLRLLEEGKVPVVAGFQGINEDGETTTLGRGGSDYSAAALAAALGADEVEIWT 219 (447)
T ss_pred ecC--------ccc-ccccchhhhhhhHHHHhcCCcEEEecCceeecCCCCEEEeCCCcHHHHHHHHHHHcCCCEEEEEE
Confidence 321 222 23444455666 9999999999999995 88888987765 7899999999999999999999
Q ss_pred ccccc---C----CCCcccccccHHHHHHHHHhhc
Q 007903 293 DGPIL---D----ESGHLIRFLTLQEADSLIRQRV 320 (585)
Q Consensus 293 DV~gl---~----~~~~lI~~it~~e~~~li~~~~ 320 (585)
||||+ | |++++|+.|+.+|+.+|..-|+
T Consensus 220 DVdGI~TaDPRiVp~Ar~i~~isyeEa~ELA~~GA 254 (447)
T COG0527 220 DVDGVYTADPRIVPDARLLPEISYEEALELAYLGA 254 (447)
T ss_pred CCCCCccCCCCCCCcceEcCccCHHHHHHHHHCCc
Confidence 99998 4 4799999999999999977665
|
|
| >PRK08373 aspartate kinase; Validated | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.6e-14 Score=152.08 Aligned_cols=194 Identities=18% Similarity=0.162 Sum_probs=128.6
Q ss_pred cCCeEEEEeCCccCCCCChHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCccc-------------ccCCc----
Q 007903 98 RGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAK-------------YLGRY---- 160 (585)
Q Consensus 98 r~k~iVIKlGGs~l~~~~l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~-------------~~~g~---- 160 (585)
.++++|+|+||+.+.+ .++.+++-|... ..|.++|+|.++-..+...|.++..... ..+.+
T Consensus 2 ~~~m~V~KFGGsSv~~-~~~~v~~ii~~~-~~~~~vvVVVSA~~gvTd~L~~l~~~~~~~~l~~i~~~h~~~~~~L~~~~ 79 (341)
T PRK08373 2 VEKMIVVKFGGSSVRY-DFEEALELVKYL-SEENEVVVVVSALKGVTDKLLKLAETFDKEALEEIEEIHEEFAKRLGIDL 79 (341)
T ss_pred CCCCEEEEECCcchHh-HHHHHHHHHHHH-hcCCCEEEEecCCchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhccch
Confidence 4688999999999987 466766666643 3588999999985445544433211000 00000
Q ss_pred ---------------cCCCHHHHHHHHHHHhH-HHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccc
Q 007903 161 ---------------RITDSESLAAAMEAAGG-IRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGV 224 (585)
Q Consensus 161 ---------------rvt~~~~l~~~~~~~G~-i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~ 224 (585)
...++..++.+. +.|+ ++..+++. .|+++|++ +..+++.+- +.++.
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~D~il-s~GE~lSa~lla~--------~L~~~Gi~----a~~l~~~~~--i~t~~--- 141 (341)
T PRK08373 80 EILSPYLKKLFNSRPDLPSEALRDYIL-SFGERLSAVLFAE--------ALENEGIK----GKVVDPWEI--LEAKG--- 141 (341)
T ss_pred hhHHHHHHHHHHHhhccCChHHHHHHH-HHHHHHHHHHHHH--------HHHHCCCc----eEEEeHHHh--eeecC---
Confidence 111233334433 4454 34445443 57899988 566655432 22211
Q ss_pred cccccCcceeeE----EEecHHHHHHHHcCCCeEEEcCCccCCCCceeee---ChHHHHHHHHHHcCCCEEEEeeccccc
Q 007903 225 VDGVDYGATGEV----KKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPIL 297 (585)
Q Consensus 225 ~~g~d~g~~G~v----~~v~~~~I~~lL~~G~IPVi~~v~~~~~G~~~ni---d~D~lAa~lA~~L~AdkLIilTDV~gl 297 (585)
+|+. .++ +..+.+.|..+++.|.|||+++...+.+|.+.++ ++|.+|+.||.+|+||+++++|||||+
T Consensus 142 ----~~~~-a~i~~~~s~~~~~~l~~~l~~g~VpVv~Gf~g~~~G~~ttLGRGGSD~tA~~lA~~L~A~~v~i~TDVdGV 216 (341)
T PRK08373 142 ----SFGN-AFIDIKKSKRNVKILYELLERGRVPVVPGFIGNLNGFRATLGRGGSDYSAVALGVLLNAKAVLIMSDVEGI 216 (341)
T ss_pred ----Cccc-eeechhhhhhhHHHHHHHHhCCcEEEEeCCccCCCCeEEEcCCCchHHHHHHHHHHcCCCEEEEEECCCcc
Confidence 2221 122 2356789999999999999998655777877665 899999999999999999999999998
Q ss_pred C-------CCCcccccccHHHHHHHH
Q 007903 298 D-------ESGHLIRFLTLQEADSLI 316 (585)
Q Consensus 298 ~-------~~~~lI~~it~~e~~~li 316 (585)
+ +++++|++++.+|+.++.
T Consensus 217 ytaDP~~v~~A~~i~~isy~Ea~ela 242 (341)
T PRK08373 217 YTADPKLVPSARLIPYLSYDEALIAA 242 (341)
T ss_pred CCCCCCCCCCCeEcccCCHHHHHHHH
Confidence 3 358899999999988764
|
|
| >COG0528 PyrH Uridylate kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.62 E-value=7.7e-14 Score=136.99 Aligned_cols=217 Identities=20% Similarity=0.190 Sum_probs=152.4
Q ss_pred cCCeEEEEeCCccCCCCC--------hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHH-cCCcccccCCccCCCHHHH
Q 007903 98 RGGTFVVIISGEIVSSPY--------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSE-RGHEAKYLGRYRITDSESL 168 (585)
Q Consensus 98 r~k~iVIKlGGs~l~~~~--------l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~-~g~~~~~~~g~rvt~~~~l 168 (585)
+.+++|+||||+++..++ ++.++++|+.+.+.|.++.||-|||......... .|++ ....
T Consensus 4 ~~~rillkLsGe~l~g~~~~gid~~~i~~~a~~i~~~~~~g~eV~iVvGGGni~Rg~~~~~~g~~-----------r~~~ 72 (238)
T COG0528 4 KYMRILLKLSGEALAGEQGFGIDPEVLDRIANEIKELVDLGVEVAVVVGGGNIARGYIGAAAGMD-----------RVTA 72 (238)
T ss_pred ceEEEEEEeecceecCCCCCCCCHHHHHHHHHHHHHHHhcCcEEEEEECCCHHHHhHHHHHcCCc-----------hhhh
Confidence 458999999999998732 7899999999999999999999998766544322 2332 2333
Q ss_pred HHHHHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHH
Q 007903 169 AAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERL 248 (585)
Q Consensus 169 ~~~~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL 248 (585)
|.+-..+..+|..+... .|.+.|+++++. +...-..+ ....+.....+.|
T Consensus 73 D~mGmlaTvmNal~L~~--------aL~~~~~~~~v~----sai~~~~~------------------~e~~~~~~A~~~l 122 (238)
T COG0528 73 DYMGMLATVMNALALQD--------ALERLGVDTRVQ----SAIAMPQV------------------AEPYSRREAIRHL 122 (238)
T ss_pred hHHHHHHHHHHHHHHHH--------HHHhcCCcceec----ccccCccc------------------cCccCHHHHHHHH
Confidence 43323555667654442 567888874332 11111000 1123556667788
Q ss_pred cCCCeEEEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeec-cccc-------CCCCcccccccHHHHHHHHHhhc
Q 007903 249 DGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIID-GPIL-------DESGHLIRFLTLQEADSLIRQRV 320 (585)
Q Consensus 249 ~~G~IPVi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTD-V~gl-------~~~~~lI~~it~~e~~~li~~~~ 320 (585)
+.|.|||.++= +|+++ -.+|++|+..|..++||.|+..|+ |||+ |||++.+++||.+|+.+...+
T Consensus 123 ~~grVvIf~gG----tg~P~-fTTDt~AALrA~ei~ad~ll~atn~VDGVY~~DPkk~pdA~~~~~Lty~e~l~~~l~-- 195 (238)
T COG0528 123 EKGRVVIFGGG----TGNPG-FTTDTAAALRAEEIEADVLLKATNKVDGVYDADPKKDPDAKKYDTLTYDEVLKIGLK-- 195 (238)
T ss_pred HcCCEEEEeCC----CCCCC-CchHHHHHHHHHHhCCcEEEEeccCCCceeCCCCCCCCCceecccCCHHHHHHhcCe--
Confidence 99999998751 12222 367999999999999999999995 9998 257999999999886554210
Q ss_pred hhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccCc
Q 007903 321 KQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGY 400 (585)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m 400 (585)
= |
T Consensus 196 ---------------------------------------------------------v---------------------m 197 (238)
T COG0528 196 ---------------------------------------------------------V---------------------M 197 (238)
T ss_pred ---------------------------------------------------------e---------------------e
Confidence 0 1
Q ss_pred HHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeec
Q 007903 401 LSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (585)
Q Consensus 401 ~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~ 444 (585)
-..|...+-+++.+ ++++|...++. |..++.++..||.|.
T Consensus 198 --D~tA~~l~~~~~i~-i~Vfn~~~~~~-l~~~~~ge~~gT~V~ 237 (238)
T COG0528 198 --DPTAFSLARDNGIP-IIVFNINKPGN-LKRALKGEEVGTIVE 237 (238)
T ss_pred --cHHHHHHHHHcCCc-EEEEeCCCCcc-HHHHHcCCCCceEec
Confidence 12366667788998 89999999998 677778899999985
|
|
| >cd04259 AAK_AK-DapDC AAK_AK-DapDC: Amino Acid Kinase Superfamily (AAK), AK-DapDC; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the bifunctional enzyme AK - DAP decarboxylase (DapDC) found in some bacteria | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.5e-13 Score=142.52 Aligned_cols=201 Identities=19% Similarity=0.177 Sum_probs=121.9
Q ss_pred eEEEEeCCccCCCCC-hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCc--c-cc--------------------
Q 007903 101 TFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHE--A-KY-------------------- 156 (585)
Q Consensus 101 ~iVIKlGGs~l~~~~-l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~--~-~~-------------------- 156 (585)
++|.|+||+.+.+.. ++++++-|..-.+.+.++|+|-++-..+...|.++-.. . .+
T Consensus 1 ~~V~KFGGtSv~~~~~~~~v~~ii~~~~~~~~~~vVVVSA~~gvTd~L~~~~~~a~~~~~~~~l~~i~~~~~~~~~~L~~ 80 (295)
T cd04259 1 WVVLKFGGTSVSSRARWDTIAKLAQKHLNTGGQPLIVCSALSGISNKLEALIDQALLDEHHSLFNAIQSRHLNLAEQLEV 80 (295)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHHhhcCCCEEEEEeCCCCCchHHHHHHHHHhccChHHHHHHHHHHHHHHHHHhhh
Confidence 369999999999865 67777766543345777888887633333322211000 0 00
Q ss_pred ----------------cCCc---cCCCHHHHHHHHHHHhHH-HHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcce
Q 007903 157 ----------------LGRY---RITDSESLAAAMEAAGGI-RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNF 216 (585)
Q Consensus 157 ----------------~~g~---rvt~~~~l~~~~~~~G~i-~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~ 216 (585)
..+. +-.++...+.+ .+.|+. ...|++. .|++.|++ +..+.+.+ +
T Consensus 81 ~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~~d~i-~s~GE~lSa~lla~--------~L~~~Gi~----a~~ld~~~--~ 145 (295)
T cd04259 81 DADALLANDLAQLQRWLTGISLLKQASPRTRAEV-LALGELMSTRLGAA--------YLEAQGLK----VKWLDARE--L 145 (295)
T ss_pred hhhhHHHHHHHHHHHHHHHhhhhccCCHHHHHHH-HHHHHHHHHHHHHH--------HHHhCCCC----eEEEcHHH--h
Confidence 0000 01122223322 345553 4445444 47889987 45554433 2
Q ss_pred eeeeec-cccccccCcceeeE-EEecHHHHHHHHcC-CCeEEEcCC-ccCCCCceeee---ChHHHHHHHHHHcCCCEEE
Q 007903 217 LAAKRK-GVVDGVDYGATGEV-KKVDVTRMRERLDG-GCLVILSNL-GYSSSGEVLNC---NTYEVATACALAIEADKLI 289 (585)
Q Consensus 217 ~~a~~~-g~~~g~d~g~~G~v-~~v~~~~I~~lL~~-G~IPVi~~v-~~~~~G~~~ni---d~D~lAa~lA~~L~AdkLI 289 (585)
+..... |. ...+|+. ..+ .....+.|.+.+.. +.|||+++. +.+.+|++..+ ++|.+|+.+|.+|+||.++
T Consensus 146 i~~~~~~~~-~~~~~~~-a~v~~~~~~~~l~~~l~~~~~v~Vv~GFig~~~~G~~ttLGrggsD~tA~~lA~~l~A~~l~ 223 (295)
T cd04259 146 LTATPTLGG-ETMNYLS-ARCESEYADALLQKRLADGAQLIITQGFIARNAHGETVLLGRGGSDTSAAYFAAKLQAARCE 223 (295)
T ss_pred eeecccccc-ccccccc-ceehhhhhHHHHHHHHhcCCceeEeCCceeeCCCCCEEEECCCChHHHHHHHHHHcCCCEEE
Confidence 222110 00 0011111 112 12234667766665 679999985 88888987755 8999999999999999999
Q ss_pred Eeeccccc---CC----CCcccccccHHHHHHHHHh
Q 007903 290 CIIDGPIL---DE----SGHLIRFLTLQEADSLIRQ 318 (585)
Q Consensus 290 ilTDV~gl---~~----~~~lI~~it~~e~~~li~~ 318 (585)
++|||||+ || ++++|++++.+|+.++...
T Consensus 224 i~TdV~Gvyt~DP~~~~~a~~i~~ls~~ea~~l~~~ 259 (295)
T cd04259 224 IWTDVPGLFTANPHEVPHARLLKRLDYDEAQEIATM 259 (295)
T ss_pred EEECCCccccCCCCCCCCCeEeceeCHHHHHHHHHc
Confidence 99999998 33 6899999999999988643
|
Aspartokinase is the first enzyme in the aspartate metabolic pathway, catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. DapDC, which is the lysA gene product, catalyzes the decarboxylation of DAP to lysine. |
| >TIGR02078 AspKin_pair Pyrococcus aspartate kinase subunit, putative | Back alignment and domain information |
|---|
Probab=99.52 E-value=7.3e-13 Score=138.74 Aligned_cols=78 Identities=17% Similarity=0.171 Sum_probs=66.9
Q ss_pred EecHHHHHHHHcCCCeEEEcCCccCCCCceeee---ChHHHHHHHHHHcCCCEEEEeecccccC-------CCCcccccc
Q 007903 238 KVDVTRMRERLDGGCLVILSNLGYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFL 307 (585)
Q Consensus 238 ~v~~~~I~~lL~~G~IPVi~~v~~~~~G~~~ni---d~D~lAa~lA~~L~AdkLIilTDV~gl~-------~~~~lI~~i 307 (585)
..+.+.+..+++.|.|||+++...+.+|...++ ++|.+|+.+|.+|+||.++++|||||++ +++++|+++
T Consensus 144 ~~~~~~l~~~l~~g~IpVv~Gf~~~~~G~~ttlGRGgSD~~Aa~lA~~L~A~~v~i~TDVdGVytaDP~~v~~A~~i~~l 223 (327)
T TIGR02078 144 KRNAKILYEVLESGKIPVIPGFYGNLNGYRVTLGRGGSDYSAVALGVLLNSKLVAIMSDVEGIFTADPKLVPSARLIPYL 223 (327)
T ss_pred HhhHHHHHHHHhCCcEEEEeCCccCCCCeEEEcCCCChHHHHHHHHHhcCCCEEEEEECCCccCCCCCCcCCCceEcccc
Confidence 456788999999999999998654777876665 7999999999999999999999999983 357899999
Q ss_pred cHHHHHHH
Q 007903 308 TLQEADSL 315 (585)
Q Consensus 308 t~~e~~~l 315 (585)
+.+|+.++
T Consensus 224 sy~Ea~el 231 (327)
T TIGR02078 224 SYEEIKIA 231 (327)
T ss_pred CHHHHHHH
Confidence 99887655
|
This family consists of proteins restricted to and found as paralogous pairs (typically close together) in species of Pyrococcus, a hyperthermophilic archaeal genus. Members are always found close to other genes of threonine biosynthesis and appear to represent the Pyrococcal form of aspartate kinase. Alignment to aspartokinase III from E. coli shows that 300 N-terminal and 20 C-terminal amino acids are homologous, but the form in Pyrococcus lacks ~ 100 amino acids in between. |
| >cd04257 AAK_AK-HSDH AAK_AK-HSDH: Amino Acid Kinase Superfamily (AAK), AK-HSDH; this CD includes the N-terminal catalytic domain of aspartokinase (AK) of the bifunctional enzyme AK - homoserine dehydrogenase (HSDH) | Back alignment and domain information |
|---|
Probab=99.51 E-value=5.6e-13 Score=138.22 Aligned_cols=193 Identities=15% Similarity=0.125 Sum_probs=121.6
Q ss_pred EEEEeCCccCCCCC-hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccC-------------------Cc-
Q 007903 102 FVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLG-------------------RY- 160 (585)
Q Consensus 102 iVIKlGGs~l~~~~-l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~-------------------g~- 160 (585)
.|.|+||+.+.+.+ +..+++-|.... .+.++|+|.++-..+...|.++.......+ .+
T Consensus 2 ~V~KFGGtSv~~~~~i~~v~~iI~~~~-~~~~~vvVvSA~~gvTd~L~~~~~~~~~~~~~~~~~l~~i~~~h~~~~~~l~ 80 (294)
T cd04257 2 KVLKFGGTSLANAERIRRVADIILNAA-KQEQVAVVVSAPGKVTDLLLELAELASSGDDAYEDILQELESKHLDLITELL 80 (294)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHhhc-cCCCEEEEEcCCCCcHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhh
Confidence 59999999999865 677777666443 467888888874445444433211000000 00
Q ss_pred -----------------------------cCCCHHHHHHHHHHHhHH-HHHHHHhhCCCCCchhHHhcCCCCcceeEEee
Q 007903 161 -----------------------------RITDSESLAAAMEAAGGI-RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVS 210 (585)
Q Consensus 161 -----------------------------rvt~~~~l~~~~~~~G~i-~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~ 210 (585)
+-.++...+.+ .+.|+. ...|++. .|++.|++ +..++
T Consensus 81 ~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~~d~i-ls~GE~lSa~lla~--------~L~~~Gi~----a~~ld 147 (294)
T cd04257 81 SGDAAAELLSALGNDLEELKDLLEGIYLLGELPDSIRAKV-LSFGERLSARLLSA--------LLNQQGLD----AAWID 147 (294)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHhhccCChhHhhhh-eeHHHHHHHHHHHH--------HHHhCCCC----eEEEc
Confidence 00001111111 233432 3334443 47888987 56666
Q ss_pred ecCcceeeeeeccccccccCcceeeEEE-ecHHHHHHHHcC-CCeEEEcCC-ccCCCCceeee---ChHHHHHHHHHHcC
Q 007903 211 VASGNFLAAKRKGVVDGVDYGATGEVKK-VDVTRMRERLDG-GCLVILSNL-GYSSSGEVLNC---NTYEVATACALAIE 284 (585)
Q Consensus 211 ~~dg~~~~a~~~g~~~g~d~g~~G~v~~-v~~~~I~~lL~~-G~IPVi~~v-~~~~~G~~~ni---d~D~lAa~lA~~L~ 284 (585)
+.+ ++.+. .+|+. ..+.. ...+.|++++.. +.|||+.+. +.+.+|++..+ .+|.+|+.+|..|+
T Consensus 148 ~~~--~i~t~-------~~~~~-a~~~~~~~~~~l~~~~~~~~~v~Vv~Gfig~~~~G~~ttlGRGGSD~~A~~lA~~l~ 217 (294)
T cd04257 148 ARE--LIVTD-------GGYLN-AVVDIELSKERIKAWFSSNGKVIVVTGFIASNPQGETTTLGRNGSDYSAAILAALLD 217 (294)
T ss_pred hHH--eeEec-------CCCCc-eEechHhhHHHHHHHHhcCCCEEEecCcccCCCCCCEEECCCCchHHHHHHHHHHhC
Confidence 655 23221 12331 22221 225677777777 899999985 77778887655 68999999999999
Q ss_pred CCEEEEeeccccc---C----CCCcccccccHHHHHHHHHh
Q 007903 285 ADKLICIIDGPIL---D----ESGHLIRFLTLQEADSLIRQ 318 (585)
Q Consensus 285 AdkLIilTDV~gl---~----~~~~lI~~it~~e~~~li~~ 318 (585)
||.++++|||||+ | +++++|++|+.+|+.++...
T Consensus 218 a~~l~i~tdVdGvyt~DP~~~~~A~~i~~is~~ea~~l~~~ 258 (294)
T cd04257 218 ADQVEIWTDVDGVYSADPRKVKDARLLPSLSYQEAMELSYF 258 (294)
T ss_pred CCEEEEEeCCCccCCCCCCCCCCCeEeceeCHHHHHHHHhC
Confidence 9999999999998 3 46899999999998888543
|
These aspartokinases are found in bacteria (E. coli AKI-HSDHI, ThrA and E. coli AKII-HSDHII, MetL) and higher plants (Z. mays AK-HSDH). AK and HSDH are the first and third enzymes in the biosynthetic pathway of the aspartate family of amino acids. AK catalyzes the phosphorylation of Asp to P-aspartyl phosphate. HSDH catalyzes the NADPH-dependent conversion of Asp 3-semialdehyde to homoserine. ThrA and MetL are involved in threonine and methionine biosynthesis, respectively. In E. coli, ThrA is subject to allosteric regulation by the end product L-threonine and the native enzyme is reported to be tetrameric. As with bacteria, plant AK and HSDH are feedback inhibited by pathway end products. Maize AK-HSDH is a Thr-sensitive 180-kD enzyme. Arabidopsis AK-HSDH is an alanine-act |
| >cd04243 AAK_AK-HSDH-like AAK_AK-HSDH-like: Amino Acid Kinase Superfamily (AAK), AK-HSDH-like; this family includes the N-terminal catalytic domain of aspartokinase (AK) of the bifunctional enzyme AK- homoserine dehydrogenase (HSDH) | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.3e-12 Score=135.54 Aligned_cols=79 Identities=20% Similarity=0.208 Sum_probs=68.3
Q ss_pred HHHHHHHHcC-CCeEEEcCC-ccCCCCceeee---ChHHHHHHHHHHcCCCEEEEeeccccc---C----CCCccccccc
Q 007903 241 VTRMRERLDG-GCLVILSNL-GYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLT 308 (585)
Q Consensus 241 ~~~I~~lL~~-G~IPVi~~v-~~~~~G~~~ni---d~D~lAa~lA~~L~AdkLIilTDV~gl---~----~~~~lI~~it 308 (585)
.+.++.+++. +.|||+.+. +.+..|++.++ ++|.+|+.+|.+|+||.++++|||||+ | +++++|++++
T Consensus 168 ~~~~~~~~~~~~~v~Vv~Gfig~~~~G~~ttLGRggsD~~A~~~a~~l~a~~~~i~tdvdGiyt~dP~~~~~a~~i~~ls 247 (293)
T cd04243 168 KERLAQLLAEHGKVVVTQGFIASNEDGETTTLGRGGSDYSAALLAALLDAEEVEIWTDVDGVYTADPRKVPDARLLKELS 247 (293)
T ss_pred HHHHHHHHhcCCCEEEecCccccCCCCCEEEeCCCCcHHHHHHHHHHcCCCEEEEEeCCCccCCCCCCCCCCCeEeceeC
Confidence 3578888887 999999985 77888998766 589999999999999999999999998 3 4689999999
Q ss_pred HHHHHHHHHhh
Q 007903 309 LQEADSLIRQR 319 (585)
Q Consensus 309 ~~e~~~li~~~ 319 (585)
.+|+.++...|
T Consensus 248 ~~ea~~l~~~G 258 (293)
T cd04243 248 YDEAMELAYFG 258 (293)
T ss_pred HHHHHHHHhCC
Confidence 99999886543
|
These aspartokinases are found in such bacteria as E. coli (AKI-HSDHI, ThrA and AKII-HSDHII, MetL) and in higher plants (Z. mays AK-HSDH). AK and HSDH are the first and third enzymes in the biosynthetic pathway of the aspartate family of amino acids. AK catalyzes the phosphorylation of Asp to P-aspartyl phosphate. HSDH catalyzes the NADPH-dependent conversion of Asp 3-semialdehyde to homoserine. ThrA and MetL are involved in threonine and methionine biosynthesis, respectively. In E. coli, ThrA is subject to allosteric regulation by the end product L-threonine and the native enzyme is reported to be tetrameric. As with bacteria, plant AK and HSDH are feedback inhibited by pathway end products. Maize AK-HSDH is a Thr-sensitive 180-kD enzyme. Arabidopsis AK- |
| >cd04245 AAK_AKiii-YclM-BS AAK_AKiii-YclM-BS: Amino Acid Kinase Superfamily (AAK), AKiii-YclM-BS; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII, a monofunctional class enzyme found in Bacilli (Bacillus subtilis YclM) and Clostridia species | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.4e-11 Score=127.17 Aligned_cols=114 Identities=14% Similarity=0.178 Sum_probs=87.7
Q ss_pred hHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHHcCCCeEEEcCC-ccCCCCceeee--
Q 007903 194 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL-GYSSSGEVLNC-- 270 (585)
Q Consensus 194 ~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL~~G~IPVi~~v-~~~~~G~~~ni-- 270 (585)
.|++.|++ +..+++.+-.+++.. .|+. ..+.....+.+.++++.+.|||+++. +.+.+|++..+
T Consensus 130 ~L~~~Gi~----a~~ld~~~~~i~t~~--------~~~~-a~~~~~~~~~~~~~~~~~~v~Vv~Gf~g~~~~G~~ttLgR 196 (288)
T cd04245 130 YLNYQGID----ARYVIPKDAGLVVTD--------EPGN-AQILPESYQKIKKLRDSDEKLVIPGFYGYSKNGDIKTFSR 196 (288)
T ss_pred HHHHCCCC----eEEEcHHHCceeecC--------Cccc-cccchhhHHHHHHHHhCCCEEEEeCccccCCCCCEEEcCC
Confidence 47888987 555555443333221 2221 12333367888888999999999985 88889999888
Q ss_pred -ChHHHHHHHHHHcCCCEEEEeeccccc---C----CCCcccccccHHHHHHHHHhhc
Q 007903 271 -NTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTLQEADSLIRQRV 320 (585)
Q Consensus 271 -d~D~lAa~lA~~L~AdkLIilTDV~gl---~----~~~~lI~~it~~e~~~li~~~~ 320 (585)
.+|..|+.+|.+|+||.+.+.|||||+ | ++++.|++|+.+|+.++...|+
T Consensus 197 ggSD~tAal~A~~l~A~~v~i~tdVdGvytaDPr~v~~A~~i~~lsy~EA~ela~~Ga 254 (288)
T cd04245 197 GGSDITGAILARGFQADLYENFTDVDGIYAANPRIVANPKPISEMTYREMRELSYAGF 254 (288)
T ss_pred CchHHHHHHHHHHcCCCEEEEEeCCCceECCCCCCCCCCeEeCccCHHHHHHHHHCCC
Confidence 999999999999999999999999998 4 5789999999999999865443
|
Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. In Bacillus subtilis (BS), YclM is reported to be a single polypeptide of 50 kD. The Bacillus subtilis 168 AKIII is induced by lysine and repressed by threonine, and it is synergistically inhibited by lysine and threonine. |
| >PRK10146 aminoalkylphosphonic acid N-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.4e-13 Score=124.76 Aligned_cols=130 Identities=22% Similarity=0.268 Sum_probs=94.1
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHHhcc----CeEEEEEECCeEEEEEEEeeecc----CCceEEeeEE
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFFK----EKCGEVAAIG 520 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i----~~~~Va~~dg~IVG~~~l~~~~~----~~~aeI~~L~ 520 (585)
.+||+++++|++.+.+++.......+......+.+.+.+ ..+++++.++++||++.+..... ...++|..++
T Consensus 4 ~~ir~a~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~~~~i~~l~ 83 (144)
T PRK10146 4 CELRPATQYDTDAVYALICELKQAEFDHQAFRVGFNANLRDPNMRYHLALLDGEVVGMIGLHLQFHLHHVNWIGEIQELV 83 (144)
T ss_pred cEEeeCcHhhHHHHHHHHHHHhcccCCHHHHHHHHHHHhcCCCceEEEEEECCEEEEEEEEEecccccccchhheeheeE
Confidence 579999999999999997655433332111122333332 46788899999999999864221 2246899999
Q ss_pred EccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccc--eeccccccc-ccCeeecCccccccc
Q 007903 521 VSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPF--LRGRTHSYY-RLKFNCSSKSFHISL 582 (585)
Q Consensus 521 V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~--~~~~a~~YY-rlGF~~~~~~~~~~~ 582 (585)
|+|+|||+|+|++||++++ +.|++.++....+.. .+..++.|| ++||...+..|.+++
T Consensus 84 v~p~~rg~GiG~~Ll~~~~----~~a~~~~~~~i~l~~~~~n~~a~~fY~~~Gf~~~~~~~~~~~ 144 (144)
T PRK10146 84 VMPQARGLNVGSKLLAWAE----EEARQAGAEMTELSTNVKRHDAHRFYLREGYEQSHFRFTKAL 144 (144)
T ss_pred ECHHHcCCCHHHHHHHHHH----HHHHHcCCcEEEEecCCCchHHHHHHHHcCCchhhhhheeCC
Confidence 9999999999999999999 899999987643321 223455555 799999998887653
|
|
| >PRK09084 aspartate kinase III; Validated | Back alignment and domain information |
|---|
Probab=99.40 E-value=6.7e-12 Score=137.62 Aligned_cols=192 Identities=15% Similarity=0.138 Sum_probs=121.9
Q ss_pred eEEEEeCCccCCCCC-hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcC-Cccc---c-------------------
Q 007903 101 TFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERG-HEAK---Y------------------- 156 (585)
Q Consensus 101 ~iVIKlGGs~l~~~~-l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g-~~~~---~------------------- 156 (585)
++|.|+||+.+.+.+ ++.+++-|.. .+.++|+|.++-..+...|.++- .... +
T Consensus 1 m~V~KFGGtSv~~~e~i~~v~~ii~~---~~~~~vvVVSA~~~~Td~L~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~l~ 77 (448)
T PRK09084 1 LVVAKFGGTSVADFDAMNRSADIVLS---NPNTRLVVLSASAGVTNLLVALAEGAEPGDERLALLDEIRQIQYAILDRLG 77 (448)
T ss_pred CEEEEECccCcCCHHHHHHHHHHHhc---CCCCEEEEEcCCCCchHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHhc
Confidence 479999999999865 6666665543 57888988888444444433221 1000 0
Q ss_pred -------------------cCCcc-CCCHHHHHHHHHHHhHH-HHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcc
Q 007903 157 -------------------LGRYR-ITDSESLAAAMEAAGGI-RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGN 215 (585)
Q Consensus 157 -------------------~~g~r-vt~~~~l~~~~~~~G~i-~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~ 215 (585)
..+.. ..++...+. ..+.|+. ...|++. .|+++|++ +..+++.+-
T Consensus 78 ~~~~~~~~i~~~~~~l~~l~~~~~~~~~~~~~d~-i~s~GE~lSa~l~~~--------~L~~~Gi~----a~~l~~~~~- 143 (448)
T PRK09084 78 DPNVVREEIERLLENITVLAEAASLATSPALTDE-LVSHGELMSTLLFVE--------LLRERGVQ----AEWFDVRKV- 143 (448)
T ss_pred cchHHHHHHHHHHHHHHHHHHhhhhcCChhhhhh-hhhHHHHHHHHHHHH--------HHHhCCCC----cEEEchHHe-
Confidence 00000 011222222 2345543 3444443 57889988 566655442
Q ss_pred eeeeeeccccccccCcceeeEE-----EecHHHHHHHHcCCCeEEEcC-CccCCCCceeee---ChHHHHHHHHHHcCCC
Q 007903 216 FLAAKRKGVVDGVDYGATGEVK-----KVDVTRMRERLDGGCLVILSN-LGYSSSGEVLNC---NTYEVATACALAIEAD 286 (585)
Q Consensus 216 ~~~a~~~g~~~g~d~g~~G~v~-----~v~~~~I~~lL~~G~IPVi~~-v~~~~~G~~~ni---d~D~lAa~lA~~L~Ad 286 (585)
+++ + .+|+. .++. ....+.+..+++.+ |||+++ ++.+.+|++..+ .+|..|+.+|..|+||
T Consensus 144 i~t-~-------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-v~Vv~Gf~g~~~~G~~ttLgRggSD~~a~~~a~~l~a~ 213 (448)
T PRK09084 144 MRT-D-------DRFGR-AEPDVAALAELAQEQLLPLLAEG-VVVTQGFIGSDEKGRTTTLGRGGSDYSAALLAEALNAS 213 (448)
T ss_pred EEe-c-------CCCCc-ccccHHHHHHHHHHHHHHhhcCC-cEEecCeeecCCCCCEeecCCCchHHHHHHHHHHcCCC
Confidence 222 1 12221 1111 11124566677888 999998 478888988766 9999999999999999
Q ss_pred EEEEeeccccc---C----CCCcccccccHHHHHHHHHhh
Q 007903 287 KLICIIDGPIL---D----ESGHLIRFLTLQEADSLIRQR 319 (585)
Q Consensus 287 kLIilTDV~gl---~----~~~~lI~~it~~e~~~li~~~ 319 (585)
.++++|||||+ | |++++|++|+.+|+.++...|
T Consensus 214 ~~~i~tdv~Gi~t~dP~~~~~a~~i~~is~~ea~ela~~G 253 (448)
T PRK09084 214 RVEIWTDVPGIYTTDPRIVPAAKRIDEISFEEAAEMATFG 253 (448)
T ss_pred EEEEEECCCccccCCCCCCCCCeEcccCCHHHHHHHHhCC
Confidence 99999999998 3 468999999999998886543
|
|
| >PRK05925 aspartate kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=6.4e-12 Score=137.05 Aligned_cols=72 Identities=22% Similarity=0.218 Sum_probs=62.6
Q ss_pred HHcCCCeEEEcCC-ccCCCCceeee---ChHHHHHHHHHHcCCCEEEEeeccccc---C----CCCcccccccHHHHHHH
Q 007903 247 RLDGGCLVILSNL-GYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTLQEADSL 315 (585)
Q Consensus 247 lL~~G~IPVi~~v-~~~~~G~~~ni---d~D~lAa~lA~~L~AdkLIilTDV~gl---~----~~~~lI~~it~~e~~~l 315 (585)
.++.+.|||+++. |.+++|++..+ ++|.+|+.+|.+|+||.++++|||||+ | +++++|++++.+|+.++
T Consensus 161 ~~~~~~v~Vv~GF~g~~~~G~~ttLgrGgsD~~AallA~~l~Ad~~~i~TdVdGvytaDP~~~~~A~~i~~is~~ea~el 240 (440)
T PRK05925 161 ALQEDAIYIMQGFIGANSSGKTTVLGRGGSDFSASLIAELCKAREVRIYTDVNGIYTMDPKIIKDAQLIPELSFEEMQNL 240 (440)
T ss_pred hccCCcEEEecCcceeCCCCCEEEeccCcHHHHHHHHHHHcCCCEEEEEEcCCccCCCCcCCCCCCeEeeEECHHHHHHH
Confidence 5677889999985 88889987654 999999999999999999999999998 3 46899999999998887
Q ss_pred HHh
Q 007903 316 IRQ 318 (585)
Q Consensus 316 i~~ 318 (585)
...
T Consensus 241 a~~ 243 (440)
T PRK05925 241 ASF 243 (440)
T ss_pred HhC
Confidence 543
|
|
| >PRK08961 bifunctional aspartate kinase/diaminopimelate decarboxylase protein; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=7.8e-12 Score=147.35 Aligned_cols=79 Identities=15% Similarity=0.103 Sum_probs=66.5
Q ss_pred cHHHHHHHHcCC-CeEEEcCC-ccCCCCceeee---ChHHHHHHHHHHcCCCEEEEeecccccC-------CCCcccccc
Q 007903 240 DVTRMRERLDGG-CLVILSNL-GYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFL 307 (585)
Q Consensus 240 ~~~~I~~lL~~G-~IPVi~~v-~~~~~G~~~ni---d~D~lAa~lA~~L~AdkLIilTDV~gl~-------~~~~lI~~i 307 (585)
+...++.+++.+ .|||+.+. +.+.+|++..+ ++|.+|+.+|.+|+||+|+++|||||++ +++++|++|
T Consensus 178 ~~~~~~~~~~~~~~v~Vv~Gf~g~~~~g~~ttLgrggsD~~A~~iA~~l~a~~~~i~tdv~Gv~t~dP~~~~~a~~i~~l 257 (861)
T PRK08961 178 DPALRERFAAQPAQVLITQGFIARNADGGTALLGRGGSDTSAAYFAAKLGASRVEIWTDVPGMFSANPKEVPDARLLTRL 257 (861)
T ss_pred HHHHHHHHhccCCeEEEeCCcceeCCCCCEEEEeCCchHHHHHHHHHHcCCCEEEEEeCCCccccCCCCCCCCceEeccc
Confidence 456777777766 49999985 88888887655 8999999999999999999999999983 367899999
Q ss_pred cHHHHHHHHHh
Q 007903 308 TLQEADSLIRQ 318 (585)
Q Consensus 308 t~~e~~~li~~ 318 (585)
+.+|+.++...
T Consensus 258 s~~e~~el~~~ 268 (861)
T PRK08961 258 DYDEAQEIATT 268 (861)
T ss_pred CHHHHHHHHHC
Confidence 99999888643
|
|
| >cd04258 AAK_AKiii-LysC-EC AAK_AKiii-LysC-EC: Amino Acid Kinase Superfamily (AAK), AKiii-LysC-EC: this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine-sensitive aspartokinase isoenzyme AKIII | Back alignment and domain information |
|---|
Probab=99.35 E-value=7.5e-11 Score=122.09 Aligned_cols=72 Identities=19% Similarity=0.222 Sum_probs=61.9
Q ss_pred cCCCeEEEcCC-ccCCCCceeee---ChHHHHHHHHHHcCCCEEEEeeccccc---C----CCCcccccccHHHHHHHHH
Q 007903 249 DGGCLVILSNL-GYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTLQEADSLIR 317 (585)
Q Consensus 249 ~~G~IPVi~~v-~~~~~G~~~ni---d~D~lAa~lA~~L~AdkLIilTDV~gl---~----~~~~lI~~it~~e~~~li~ 317 (585)
..+.|||+++. +.+.+|++..+ ++|..|+.+|.+|+|+.++++|||+|+ | +++++|++++.+|+.++..
T Consensus 176 ~~~~v~Vv~Gf~g~~~~G~~ttLGrggsD~~a~~~a~~l~a~~~~i~tdv~Gv~~~dP~~~~~a~~i~~isy~Ea~ela~ 255 (292)
T cd04258 176 LAGTVVVTQGFIGSTEKGRTTTLGRGGSDYSAALLAEALHAEELQIWTDVAGIYTTDPRICPAARAIKEISFAEAAEMAT 255 (292)
T ss_pred hcCCEEEECCccccCCCCCEEecCCCchHHHHHHHHHHcCCCEEEEEECCCccCCCCCCCCCCCeEeceeCHHHHHHHHH
Confidence 45689999985 77888987754 899999999999999999999999998 3 4589999999999999875
Q ss_pred hhc
Q 007903 318 QRV 320 (585)
Q Consensus 318 ~~~ 320 (585)
.|+
T Consensus 256 ~Ga 258 (292)
T cd04258 256 FGA 258 (292)
T ss_pred CCC
Confidence 543
|
AKIII is a monofunctional class enzyme (LysC) found in some bacteria such as E. coli. Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. In E. coli, LysC is reported to be a homodimer of 50 kD subunits. |
| >PRK07757 acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=8.5e-12 Score=116.06 Aligned_cols=121 Identities=30% Similarity=0.499 Sum_probs=95.8
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHHhccCeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCCcCC
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQ 528 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGk 528 (585)
+.||+++++|++.+.+++..........+.+.+.+...+..++++..+++++|++.+.. .++..++|..++|+|+|||+
T Consensus 2 ~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~lvG~~~l~~-~~~~~~~i~~v~V~p~~rg~ 80 (152)
T PRK07757 2 MEIRKARLSDVKAIHALINVYAKKGLMLPRSLDELYENIRDFYVAEEEGEIVGCCALHI-LWEDLAEIRSLAVSEDYRGQ 80 (152)
T ss_pred ceEeeCCcccHHHHHHHHHHHHhcCCccCCCHHHHHhccCcEEEEEECCEEEEEEEEEe-ccCCceEEEEEEECHHHcCC
Confidence 46899999999999999876655555555667777777777888899999999999874 44567899999999999999
Q ss_pred cHHHHHHHHHHhhhHHHHHHcCCcccCccceecccccccccCeeecCc
Q 007903 529 GQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYYRLKFNCSSK 576 (585)
Q Consensus 529 GIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YYrlGF~~~~~ 576 (585)
|+|++|++.++ +.+++.++..... .......|.|+||+..+.
T Consensus 81 Glg~~Ll~~l~----~~a~~~g~~~i~~--~~~~~~~Y~k~GF~~~~~ 122 (152)
T PRK07757 81 GIGRMLVEACL----EEARELGVKRVFA--LTYQPEFFEKLGFREVDK 122 (152)
T ss_pred CHHHHHHHHHH----HHHHhCCCCeEEE--EeCcHHHHHHCCCEEccc
Confidence 99999999999 8888888765321 112334555899998855
|
|
| >PTZ00330 acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=4e-12 Score=117.08 Aligned_cols=129 Identities=19% Similarity=0.257 Sum_probs=88.5
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHHhcc------CeEEEEEECCeEEEEEEEeeec-----cCCceEEe
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL------DSFYVVEREGQIIACAALFPFF-----KEKCGEVA 517 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i------~~~~Va~~dg~IVG~~~l~~~~-----~~~~aeI~ 517 (585)
++||+++++|++.+.+++..............+.+.... ..+++++.+|++||++.+.... ....++|.
T Consensus 7 ~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~i~ 86 (147)
T PTZ00330 7 LELRDLEEGDLGSVLELLSHLTSAPALSQEELEQIAARRRLAGVVTRVFVHSPTQRIVGTASLFVEPKFTRGGKCVGHIE 86 (147)
T ss_pred EEEEEcccccHHHHHHHHHHhcCCCccchhHHHHHHHHHhcCCCceEEEEEeCCCEEEEEEEEEeccccccCCCceEEEE
Confidence 579999999999999997654322211111111222111 2356666789999999886321 11247899
Q ss_pred eEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceecccccccccCeeecCcccccc
Q 007903 518 AIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYYRLKFNCSSKSFHIS 581 (585)
Q Consensus 518 ~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YYrlGF~~~~~~~~~~ 581 (585)
.++|+|+|||+|+|++|+++++ +++++.++....+.........|.++||+..+.++..+
T Consensus 87 ~~~V~~~~rg~Gig~~l~~~~~----~~a~~~~~~~l~l~~n~~a~~~y~k~GF~~~~~~~~~~ 146 (147)
T PTZ00330 87 DVVVDPSYRGQGLGRALISDLC----EIARSSGCYKVILDCTEDMVAFYKKLGFRACERQMRLD 146 (147)
T ss_pred EEEECHHHcCCCHHHHHHHHHH----HHHHHCCCCEEEEecChHHHHHHHHCCCEEeceEEEEe
Confidence 9999999999999999999999 88888887665443322333345579999988877654
|
|
| >PRK09034 aspartate kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.1e-10 Score=128.35 Aligned_cols=127 Identities=14% Similarity=0.156 Sum_probs=92.0
Q ss_pred HHHhHH-HHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHHcCC
Q 007903 173 EAAGGI-RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGG 251 (585)
Q Consensus 173 ~~~G~i-~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL~~G 251 (585)
.+.|+. +..|++. .|++.|++ +..+++.+-.+++. .+|+. ..+.....+.+..++..+
T Consensus 116 ~s~GE~~S~~l~a~--------~L~~~g~~----a~~~~~~~~~~~t~--------~~~~~-a~i~~~~~~~~~~~~~~~ 174 (454)
T PRK09034 116 KARGEDLNAKLIAA--------YLNYEGIP----ARYVDPKEAGIIVT--------DEPGN-AQVLPESYDNLKKLRDRD 174 (454)
T ss_pred HHHHHHHHHHHHHH--------HHHhCCCC----cEEEchHHceEEec--------CCcCc-eeEcHhhHHHHHHHHhcC
Confidence 345543 4445554 47888987 45555444333322 12332 223334567788777888
Q ss_pred CeEEEcCC-ccCCCCceeee---ChHHHHHHHHHHcCCCEEEEeeccccc---C----CCCcccccccHHHHHHHHHhhc
Q 007903 252 CLVILSNL-GYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTLQEADSLIRQRV 320 (585)
Q Consensus 252 ~IPVi~~v-~~~~~G~~~ni---d~D~lAa~lA~~L~AdkLIilTDV~gl---~----~~~~lI~~it~~e~~~li~~~~ 320 (585)
.|||+++. |.+.+|++..+ .+|..|+.+|.+|+||.+.+.|||||+ | |+++.+++|+.+|+.+|...|+
T Consensus 175 ~v~Vv~GFig~~~~g~~ttlgRggSD~tA~~la~~l~A~~~~i~tdV~Gi~taDPr~v~~A~~l~~lsy~Ea~ela~~Ga 254 (454)
T PRK09034 175 EKLVIPGFFGVTKDGQIVTFSRGGSDITGAILARGVKADLYENFTDVDGIYAANPRIVKNPKSIKEITYREMRELSYAGF 254 (454)
T ss_pred CEEEecCccccCCCCCEEecCCCcHHHHHHHHHHHcCCCEEEEEecCCccCcCCCCCCCCCeECCccCHHHHHHHHhCCc
Confidence 89999985 88888987765 889999999999999999999999998 4 5789999999999999975544
|
|
| >PRK07922 N-acetylglutamate synthase; Validated | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.7e-11 Score=117.20 Aligned_cols=121 Identities=23% Similarity=0.389 Sum_probs=91.0
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHHhccCeEEEEE-ECCeEEEEEEEeeeccCCceEEeeEEEccCCcC
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVE-REGQIIACAALFPFFKEKCGEVAAIGVSPECRG 527 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i~~~~Va~-~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyRG 527 (585)
+.||+++++|.+.+.+++................+......+++++ .+++++|++.+... ....++|..++|+|+|||
T Consensus 6 i~iR~a~~~D~~~i~~L~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~iiG~~~~~~~-~~~~~~i~~l~V~p~~rg 84 (169)
T PRK07922 6 ITVRRARTSDVPAIKRLVDPYAQGRILLEKNLVTLYEAVQEFWVAEHLDGEVVGCGALHVM-WEDLAEIRTVAVDPAARG 84 (169)
T ss_pred ceeecCCHhhHHHHHHHHHHHhhcCccccchHHHHHhhcCcEEEEEecCCcEEEEEEEeec-CCCceEEEEEEECHHHhC
Confidence 5899999999999999987655443332333333444456678888 89999999988743 345789999999999999
Q ss_pred CcHHHHHHHHHHhhhHHHHHHcCCcccCccceecccccccccCeeecCc
Q 007903 528 QGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYYRLKFNCSSK 576 (585)
Q Consensus 528 kGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YYrlGF~~~~~ 576 (585)
+|+|++||++++ ++|++.|+...-.. ......|.|+||+..+.
T Consensus 85 kGiG~~Ll~~~~----~~a~~~g~~~l~~~--~~~~~fY~k~GF~~~~~ 127 (169)
T PRK07922 85 RGVGHAIVERLL----DVARELGLSRVFVL--TFEVEFFARHGFVEIDG 127 (169)
T ss_pred CCHHHHHHHHHH----HHHHHcCCCEEEEE--eccHHHHHHCCCEECcc
Confidence 999999999999 99999998864221 12234455799998754
|
|
| >cd04247 AAK_AK-Hom3 AAK_AK-Hom3: Amino Acid Kinase Superfamily (AAK), AK-Hom3; this CD includes the N-terminal catalytic domain of the aspartokinase HOM3, a monofunctional class enzyme found in Saccharomyces cerevisiae and other related AK domains | Back alignment and domain information |
|---|
Probab=99.28 E-value=9.4e-11 Score=121.99 Aligned_cols=71 Identities=21% Similarity=0.247 Sum_probs=61.5
Q ss_pred CCCeEEEcCC-ccCCCCceeee---ChHHHHHHHHHHcCCCEEEEeeccccc---C----CCCcccccccHHHHHHHHHh
Q 007903 250 GGCLVILSNL-GYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTLQEADSLIRQ 318 (585)
Q Consensus 250 ~G~IPVi~~v-~~~~~G~~~ni---d~D~lAa~lA~~L~AdkLIilTDV~gl---~----~~~~lI~~it~~e~~~li~~ 318 (585)
.+.|||+++. +.+.+|++..+ .+|..|+.+|..|+|+.++++|||+|+ | +++++|++|+.+|+.++...
T Consensus 189 ~~~v~Vv~GFig~~~~G~~ttLGRgGsD~~A~~la~~l~a~~v~i~tdVdGvyt~DP~~~~~a~~i~~is~~ea~el~~~ 268 (306)
T cd04247 189 ENRVPVVTGFFGNVPGGLLSQIGRGYTDLCAALCAVGLNADELQIWKEVDGIFTADPRKVPTARLLPSITPEEAAELTYY 268 (306)
T ss_pred CCceEEeeccEecCCCCCeEEeCCCchHHHHHHHHHHcCCCEEEEeecCCeeECCCCCCCCCCeEecccCHHHHHHHHhC
Confidence 5789999985 77788887766 889999999999999999999999998 3 45899999999999998755
Q ss_pred hc
Q 007903 319 RV 320 (585)
Q Consensus 319 ~~ 320 (585)
|+
T Consensus 269 Ga 270 (306)
T cd04247 269 GS 270 (306)
T ss_pred cC
Confidence 44
|
Aspartokinase, the first enzyme in the aspartate metabolic pathway, catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP, and in fungi, is responsible for the production of threonine, isoleucine and methionine. S. cerevisiae has a single aspartokinase isoenzyme type, which is regulated by feedback, allosteric inhibition by L-threonine. Recent studies show that the allosteric transition triggered by binding of threonine to AK involves a large change in the conformation of the native hexameric enzyme that is converted to an inactive one of different shape and substantially smaller hydrodynamic size. |
| >PRK09436 thrA bifunctional aspartokinase I/homoserine dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=8.5e-11 Score=137.50 Aligned_cols=76 Identities=20% Similarity=0.233 Sum_probs=64.2
Q ss_pred HHHHHHH-cCCCeEEEcCC-ccCCCCceeeeC---hHHHHHHHHHHcCCCEEEEeeccccc---C----CCCcccccccH
Q 007903 242 TRMRERL-DGGCLVILSNL-GYSSSGEVLNCN---TYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTL 309 (585)
Q Consensus 242 ~~I~~lL-~~G~IPVi~~v-~~~~~G~~~nid---~D~lAa~lA~~L~AdkLIilTDV~gl---~----~~~~lI~~it~ 309 (585)
+.|++++ +.+.|||+++. +.+.+|++..+. +|.+|+.+|..|+||.++++|||||+ | +++++|++++.
T Consensus 172 ~~i~~~~~~~~~v~Vv~Gfig~~~~G~~ttlGRgGSD~~A~~~A~~l~A~~~~i~tdVdGvyt~DP~~~~~A~~i~~isy 251 (819)
T PRK09436 172 RRIAASFIPADHVILMPGFTAGNEKGELVTLGRNGSDYSAAILAACLDADCCEIWTDVDGVYTADPRVVPDARLLKSLSY 251 (819)
T ss_pred HHHHHHHhcCCcEEEecCcccCCCCCCEEEeCCCCchHHHHHHHHHcCCCEEEEEECCCceECCCCCCCCCCeEeeEecH
Confidence 4566554 56899999985 777889887774 89999999999999999999999998 3 46899999999
Q ss_pred HHHHHHHH
Q 007903 310 QEADSLIR 317 (585)
Q Consensus 310 ~e~~~li~ 317 (585)
+|+.++..
T Consensus 252 ~ea~el~~ 259 (819)
T PRK09436 252 QEAMELSY 259 (819)
T ss_pred HHHHHHHh
Confidence 99888753
|
|
| >PLN02551 aspartokinase | Back alignment and domain information |
|---|
Probab=99.25 E-value=3e-10 Score=126.23 Aligned_cols=197 Identities=17% Similarity=0.152 Sum_probs=122.3
Q ss_pred CeEEEEeCCccCCCCC-hHHHHHHHHHHHHCCCeEEEEeCch-HHHHHHHHHc------CCccc-c--------------
Q 007903 100 GTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTH-VQIDKLLSER------GHEAK-Y-------------- 156 (585)
Q Consensus 100 k~iVIKlGGs~l~~~~-l~~l~~~Ia~L~~~G~~vVlVhGgg-~~i~~~l~~~------g~~~~-~-------------- 156 (585)
.++|.|+||+.+.+.+ ++.+++-|..- ...++|+|.++- ...+.+++.. +.+.. +
T Consensus 52 ~~~V~KFGGtSv~~~e~i~~v~~iI~~~--~~~~~vVVvSA~~~~Td~L~~~~~~a~~~~~~~~~~~~~l~~i~~~h~~~ 129 (521)
T PLN02551 52 LTVVMKFGGSSVASAERMREVADLILSF--PDERPVVVLSAMGKTTNNLLLAGEKAVSCGVTNVSEIEELSAIRELHLRT 129 (521)
T ss_pred ceEEEEECCCccCCHHHHHHHHHHHHhc--CCCCEEEEEcCCCCchHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHH
Confidence 4679999999999865 67777666542 234577888763 2333332210 00000 0
Q ss_pred ---------------------cCCcc---CCCHHHHHHHHHHHhHH-HHHHHHhhCCCCCchhHHhcCCCCcceeEEeee
Q 007903 157 ---------------------LGRYR---ITDSESLAAAMEAAGGI-RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSV 211 (585)
Q Consensus 157 ---------------------~~g~r---vt~~~~l~~~~~~~G~i-~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~ 211 (585)
..|.. -.++...+.+ .+.|+. ...|++. .|++.|++ +..+++
T Consensus 130 ~~~L~~~~~~~~~~~~~l~~ll~~i~~~~~~~~~~~d~i-ls~GE~lSa~lla~--------~L~~~Gi~----a~~lda 196 (521)
T PLN02551 130 ADELGVDESVVEKLLDELEQLLKGIAMMKELTPRTRDYL-VSFGERMSTRIFAA--------YLNKIGVK----ARQYDA 196 (521)
T ss_pred HHHhhcchHHHHHHHHHHHHHHHhhhhhcccchHHHHHH-HhHHHHHHHHHHHH--------HHHHCCCC----cEEech
Confidence 00100 0122222222 344543 4445554 47888987 555555
Q ss_pred cCcceeeeeeccccccccCcceeeEEEecHHHHHHHH-----cCCCeEEEcCC-ccC-CCCceeee---ChHHHHHHHHH
Q 007903 212 ASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERL-----DGGCLVILSNL-GYS-SSGEVLNC---NTYEVATACAL 281 (585)
Q Consensus 212 ~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL-----~~G~IPVi~~v-~~~-~~G~~~ni---d~D~lAa~lA~ 281 (585)
.+-.+++. .+|+. ..+.......|.+.+ +.+.|||+++. |.+ .+|++..+ .+|..|+.||.
T Consensus 197 ~~~gi~t~--------~~~~~-a~i~~~~~~~l~~~l~~~~~~~~~v~Vv~GFig~~~~~G~~ttLGRGGSD~sA~~la~ 267 (521)
T PLN02551 197 FDIGFITT--------DDFTN-ADILEATYPAVAKRLHGDWIDDPAVPVVTGFLGKGWKTGAITTLGRGGSDLTATTIGK 267 (521)
T ss_pred HHcceEec--------CCCCc-cchhhhhHHHHHHHHHhhhccCCeEEEEcCccccCCCCCcEEecCCChHHHHHHHHHH
Confidence 54333332 12331 222233344454444 45689999985 888 78998766 78999999999
Q ss_pred HcCCCEEEEeeccccc---C----CCCcccccccHHHHHHHHHhhc
Q 007903 282 AIEADKLICIIDGPIL---D----ESGHLIRFLTLQEADSLIRQRV 320 (585)
Q Consensus 282 ~L~AdkLIilTDV~gl---~----~~~~lI~~it~~e~~~li~~~~ 320 (585)
+|+|+.+.+.|||||+ | +++++|++|+.+|+.+|..-|+
T Consensus 268 ~L~A~~v~I~tDV~Gi~taDPr~v~~A~~l~~lsy~Ea~elA~~Ga 313 (521)
T PLN02551 268 ALGLREIQVWKDVDGVLTCDPRIYPNAVPVPYLTFDEAAELAYFGA 313 (521)
T ss_pred HcCCCEEEEEeCCCceeCCCCCCCCCceEecccCHHHHHHHHhCCC
Confidence 9999999999999998 4 4689999999999999976555
|
|
| >PLN02706 glucosamine 6-phosphate N-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.24 E-value=2.9e-11 Score=112.19 Aligned_cols=127 Identities=20% Similarity=0.260 Sum_probs=90.2
Q ss_pred cccccccccCHH-HHHHHHHHHHHccccccCCHHHHHhcc---------CeEEEEEE--CCeEEEEEEEeeec-----cC
Q 007903 449 EGTRTAKVTDLS-GIKQIIQPLVESGALVRRTDEELLKAL---------DSFYVVER--EGQIIACAALFPFF-----KE 511 (585)
Q Consensus 449 ~~IR~at~~D~~-~I~~Li~~~~~~~~~~~~~~e~l~~~i---------~~~~Va~~--dg~IVG~~~l~~~~-----~~ 511 (585)
..||+++++|.+ .+.+++.... ...+++.+.+...+ ..+++++. ++++||++.+.+.. ..
T Consensus 7 ~~ir~~~~~D~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~ 83 (150)
T PLN02706 7 FKVRRLEISDKSKGFLELLQQLT---VVGDVTEEEFEARFQELASLGDDHLICVIEDAASGRIIATGSVFVERKFIRNCG 83 (150)
T ss_pred eEEeEhhhcccchHHHHHHHhcc---CCCCCCHHHHHHHHHHHHhCCCcEEEEEEEeCCCCcEEEEEEEEEEeecccCCC
Confidence 469999999998 5888765432 12244544443332 23455655 68999999874211 12
Q ss_pred CceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceecccccccccCeeecCccccccc
Q 007903 512 KCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYYRLKFNCSSKSFHISL 582 (585)
Q Consensus 512 ~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YYrlGF~~~~~~~~~~~ 582 (585)
..++|..++|+|+|||+|||++|+++++ ++|+++|+....+.........|.|+||...+.+|..++
T Consensus 84 ~~~~i~~i~V~~~~rg~GiG~~ll~~~~----~~a~~~g~~~i~l~~~~~N~~~y~k~GF~~~g~~~~~~~ 150 (150)
T PLN02706 84 KVGHIEDVVVDSAARGKGLGKKIIEALT----EHARSAGCYKVILDCSEENKAFYEKCGYVRKEIQMVKYF 150 (150)
T ss_pred cEEEEEEEEECHHHcCCCHHHHHHHHHH----HHHHHcCCCEEEEEeccccHHHHHHCcCEEehhheEecC
Confidence 4567888999999999999999999999 999999998865544344444555899999998887653
|
|
| >PF13527 Acetyltransf_9: Acetyltransferase (GNAT) domain; PDB: 3SXN_C 2I00_D 1M4D_B 1M44_A 1M4G_B 1M4I_A 2OZG_A 2HV2_F 3N7Z_A 3RYO_B | Back alignment and domain information |
|---|
Probab=99.24 E-value=3e-11 Score=108.69 Aligned_cols=117 Identities=22% Similarity=0.342 Sum_probs=79.9
Q ss_pred ccccccccCHHHHHHHHHHHHHccccccCCHHHHHhcc--CeEEEEEECCeEEEEEEEeeec------cCCceEEeeEEE
Q 007903 450 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--DSFYVVEREGQIIACAALFPFF------KEKCGEVAAIGV 521 (585)
Q Consensus 450 ~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i--~~~~Va~~dg~IVG~~~l~~~~------~~~~aeI~~L~V 521 (585)
+||+++++|.+++.+|++..........+......... ..++++++++++||++.+.+.. .-+.+.|..++|
T Consensus 1 ~iR~~~~~d~~~i~~l~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivg~~~~~~~~~~~~g~~~~~~~i~~v~v 80 (127)
T PF13527_consen 1 EIRPLTESDFEQIIELFNEAFGDSESPPEIWEYFRNLYGPGRCVVAEDDGKIVGHVGLIPRRLSVGGKKFKAAYIGDVAV 80 (127)
T ss_dssp -EEEE-GGGHHHHHHHHHHHTTT-CHHHHHHHHHHHHHHTTEEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEEEEEEE
T ss_pred CceECCHHHHHHHHHHHHHHCCCCCCchhhhhhhhcccCcCcEEEEEECCEEEEEEEEEEEEEEECCEEEEEEEEEEEEE
Confidence 48999999999999996554332222110011112222 6889999999999999987541 124688999999
Q ss_pred ccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceeccccccc-ccCeee
Q 007903 522 SPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYY-RLKFNC 573 (585)
Q Consensus 522 ~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YY-rlGF~~ 573 (585)
+|+|||+|+|++||++++ +.+++.++.-. ++.+....|| ++||+.
T Consensus 81 ~p~~R~~Gl~~~L~~~~~----~~~~~~g~~~~---~l~~~~~~~Y~~~G~~~ 126 (127)
T PF13527_consen 81 DPEYRGRGLGRQLMRALL----ERARERGVPFI---FLFPSSPPFYRRFGFEY 126 (127)
T ss_dssp -GGGTTSSHHHHHHHHHH----HHHHHTT-SEE---EEE-SSHHHHHHTTEEE
T ss_pred CHHHcCCCHHHHHHHHHH----HHHHhCCCCEE---EEecCChhhhhcCCCEE
Confidence 999999999999999999 88888887642 3333334555 799985
|
... |
| >PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=6.9e-11 Score=134.65 Aligned_cols=122 Identities=26% Similarity=0.457 Sum_probs=97.1
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHHhccCeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCCcCC
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQ 528 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGk 528 (585)
++||+++++|++.+.+++..+.......++..+.+......++|++.++++|||+.+.. .+...++|..|+|+|+|||+
T Consensus 464 m~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~~~l~~~~~~~~Va~~~g~IVG~~~l~~-~~~~~~~I~~i~V~P~~rGk 542 (614)
T PRK12308 464 VKVRPARLTDIDAIEGMVAYWAGLGENLPRSRNELVRDIGSFAVAEHHGEVTGCASLYI-YDSGLAEIRSLGVEAGWQVQ 542 (614)
T ss_pred CEEEECCHHHHHHHHHHHHHHHhhhcccccCHHHHhcccCcEEEEEECCEEEEEEEEEE-cCCCeEEEEEEEECHHHcCC
Confidence 57999999999999999876554444456666667666678899999999999999874 33456899999999999999
Q ss_pred cHHHHHHHHHHhhhHHHHHHcCCcccCccceeccccccc-ccCeeecCccc
Q 007903 529 GQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYY-RLKFNCSSKSF 578 (585)
Q Consensus 529 GIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YY-rlGF~~~~~~~ 578 (585)
|||++||++++ +++++.|++...+ ....+.|| ++||+..+..+
T Consensus 543 GIGk~Ll~~l~----~~ak~~g~~~i~l---~~~a~~FYek~GF~~~~~~~ 586 (614)
T PRK12308 543 GQGSALVQYLV----EKARQMAIKKVFV---LTRVPEFFMKQGFSPTSKSL 586 (614)
T ss_pred CHHHHHHHHHH----HHHHHCCCCEEEE---eeCcHHHHHHCCCEECCccc
Confidence 99999999999 9999999876432 22334455 79999887654
|
|
| >TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.9e-10 Score=117.93 Aligned_cols=123 Identities=21% Similarity=0.209 Sum_probs=89.1
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccC-CHHHHHhcc---CeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccC
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRR-TDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPE 524 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~-~~e~l~~~i---~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~Pe 524 (585)
..||+++++|++++.+|+...... +..++ ..+.+...+ ..+++++.++++||++.+........++|..++|+|+
T Consensus 116 ~~IR~a~~~D~~~l~~L~~~v~~~-~~~~~~~~~~l~~~~~~~~~~~v~~~~g~iVG~~~~~~~~~~~~~eI~~i~V~P~ 194 (266)
T TIGR03827 116 FTLRIATEDDADAMAALYRKVFPT-YPFPIHDPAYLLETMKSNVVYFGVEDGGKIIALASAEMDPENGNAEMTDFATLPE 194 (266)
T ss_pred eEEEECCHHHHHHHHHHHHHHhcc-CCCCccCHHHHHHHhcCCcEEEEEEECCEEEEEEEEecCCCCCcEEEEEEEECHH
Confidence 579999999999999997765432 22222 223333333 4577888999999999875434456789999999999
Q ss_pred CcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccce--e-cccccccccCeeecCc
Q 007903 525 CRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFL--R-GRTHSYYRLKFNCSSK 576 (585)
Q Consensus 525 yRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~--~-~~a~~YYrlGF~~~~~ 576 (585)
|||+|+|++||++++ +++++.|+...-.... . +....|+++||...+.
T Consensus 195 yRG~GiG~~Ll~~l~----~~a~~~g~~~l~~~~~~~n~~a~~ly~k~GF~~~G~ 245 (266)
T TIGR03827 195 YRGKGLAKILLAAME----KEMKEKGIRTAYTIARASSYGMNITFARLGYAYGGT 245 (266)
T ss_pred HcCCCHHHHHHHHHH----HHHHHCCCcEEEeehhhcchhHHHHHHHcCCccccE
Confidence 999999999999999 8999999876422111 1 1223477899997643
|
Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution. |
| >PF13673 Acetyltransf_10: Acetyltransferase (GNAT) domain; PDB: 2FIW_A 1BOB_A 3FNC_B 3EXN_A | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.8e-10 Score=101.73 Aligned_cols=104 Identities=27% Similarity=0.363 Sum_probs=72.8
Q ss_pred CHHHHHHHHHHHHHccccc---------cCCHHHHHhcc----CeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccC
Q 007903 458 DLSGIKQIIQPLVESGALV---------RRTDEELLKAL----DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPE 524 (585)
Q Consensus 458 D~~~I~~Li~~~~~~~~~~---------~~~~e~l~~~i----~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~Pe 524 (585)
|+++|.+|+.......... +.+.+.+...+ ..++|++.++++|||+.+. +..+|..++|+|+
T Consensus 1 D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~-----~~~~i~~l~v~p~ 75 (117)
T PF13673_consen 1 DIPAIAELYREAWQENYWDYGPEQIDAWRYSPEDLEEYLEEGSHTIFVAEEGGEIVGFAWLE-----PDGEISHLYVLPE 75 (117)
T ss_dssp GHHHHHHHHHHHHHHHTTTTSHHHHHHHHSSHHHHHHHHCTCCCEEEEEEETTEEEEEEEEE-----TCEEEEEEEE-GG
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHHHHHhcCHHHHHHHHHhcCCEEEEEEECCEEEEEEEEc-----CCCeEEEEEEChh
Confidence 7888989887765543211 13344444444 4799999999999999876 2455999999999
Q ss_pred CcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceecccccccccCe
Q 007903 525 CRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYYRLKF 571 (585)
Q Consensus 525 yRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YYrlGF 571 (585)
|||+|+|++|+++++ ++++. ++....+.........|.+.||
T Consensus 76 ~r~~Gig~~Ll~~~~----~~~~~-~~~~l~~~~~~~a~~~y~~~GF 117 (117)
T PF13673_consen 76 YRGRGIGRALLDAAE----KEAKD-GIRRLTVEANERARRFYRKLGF 117 (117)
T ss_dssp GTTSSHHHHHHHHHH----HHHTT-TCEEEEEEC-HHHHHHHHHTT-
T ss_pred hcCCcHHHHHHHHHH----HHHHc-CCcEEEEEeCHHHHHHHHhCCC
Confidence 999999999999999 88766 7776544422223334557998
|
|
| >COG2054 Uncharacterized archaeal kinase related to aspartokinases, uridylate kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.8e-09 Score=100.38 Aligned_cols=114 Identities=14% Similarity=0.206 Sum_probs=84.4
Q ss_pred HcCCCeEEEcCC----ccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC---CCCcccccccHHHHHHHHHhhc
Q 007903 248 LDGGCLVILSNL----GYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD---ESGHLIRFLTLQEADSLIRQRV 320 (585)
Q Consensus 248 L~~G~IPVi~~v----~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~---~~~~lI~~it~~e~~~li~~~~ 320 (585)
...+.+||+-|- ..|+--..+-+.+|.+|.++|.+++|.++|+.|||||++ ++++++++|+..|++. +.
T Consensus 90 i~~~~~aVLLPyrlLr~~DplpHSW~VTSDsis~~Ia~~~~~~~vv~aTDVdGI~~~~~~~kLv~eI~A~dl~~----~~ 165 (212)
T COG2054 90 IKPDAKAVLLPYRLLRKTDPLPHSWEVTSDSISVWIAAKAGATEVVKATDVDGIYEEDPKGKLVREIRASDLKT----GE 165 (212)
T ss_pred cCcccceEeeehHhhhcCCCCCcceeecccHHHHHHHHHcCCcEEEEEecCCcccccCCcchhhhhhhHhhccc----Cc
Confidence 345667777652 234444678899999999999999999999999999984 5678999998776533 10
Q ss_pred hhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccCc
Q 007903 321 KQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGY 400 (585)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m 400 (585)
+..| + +
T Consensus 166 ------------------t~vD-----------------------------------~---------------------~ 171 (212)
T COG2054 166 ------------------TSVD-----------------------------------P---------------------Y 171 (212)
T ss_pred ------------------cccc-----------------------------------c---------------------h
Confidence 0001 2 5
Q ss_pred HHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeecc
Q 007903 401 LSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (585)
Q Consensus 401 ~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~~ 445 (585)
.|+| +.+.+.+ ..++||..|..+++.+...+-+||.|..
T Consensus 172 ~P~L-----l~k~~m~-~~Vvng~~pervi~~lrGk~~v~T~Ivg 210 (212)
T COG2054 172 LPKL-----LVKYKMN-CRVVNGKEPERVILALRGKEVVGTLIVG 210 (212)
T ss_pred hhHH-----HHHcCCc-eEEECCCCHHHHHHHHhccccceEEEeC
Confidence 6765 3677887 7999999999988877555668999864
|
|
| >PRK09831 putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=3.4e-10 Score=105.13 Aligned_cols=113 Identities=15% Similarity=0.099 Sum_probs=79.1
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHH-----------HHHhcc--CeEEEEEECCeEEEEEEEeeeccCCceE
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDE-----------ELLKAL--DSFYVVEREGQIIACAALFPFFKEKCGE 515 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e-----------~l~~~i--~~~~Va~~dg~IVG~~~l~~~~~~~~ae 515 (585)
++||+++++|++.+.+++............+.+ .+...+ ..++++..+|+++|++.+.. .+
T Consensus 1 ~~ir~a~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~iiG~~~~~~------~~ 74 (147)
T PRK09831 1 IQIRNYQPGDFQQLCAIFIRAVTMTASQHYSPQQIAAWAQIDESRWKEKLAKSQVRVAVINAQPVGFITCIE------HY 74 (147)
T ss_pred CccccCChhhHHHHHHHHHHHHHHhhhhcCCHHHHHhccCCCHHHHHHHHhcCceEEEEECCEEEEEEEehh------ce
Confidence 368999999999999998765443222122222 122222 46788899999999988752 46
Q ss_pred EeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceecccccccccCeeecCc
Q 007903 516 VAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYYRLKFNCSSK 576 (585)
Q Consensus 516 I~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YYrlGF~~~~~ 576 (585)
+..++|+|+|||+|+|++||++++ +.+....+.. .......|.++||+..+.
T Consensus 75 i~~~~v~p~~~g~GiG~~Ll~~~~----~~~~~l~v~~-----~~~a~~~Y~k~Gf~~~g~ 126 (147)
T PRK09831 75 IDMLFVDPEYTRRGVASALLKPLI----KSESELTVDA-----SITAKPFFERYGFQTVKQ 126 (147)
T ss_pred eeeEEECHHHcCCCHHHHHHHHHH----HHhhheEeec-----chhhHHHHHHCCCEEeec
Confidence 788999999999999999999999 6666533321 112334455799998755
|
|
| >PHA00673 acetyltransferase domain containing protein | Back alignment and domain information |
|---|
Probab=99.10 E-value=6.3e-10 Score=104.21 Aligned_cols=126 Identities=19% Similarity=0.148 Sum_probs=88.6
Q ss_pred ccccccCHHHHHHHHHHHHHcc----ccccCC----HHHHHhcc-CeEEEEEECCeEEEEEEEeeec-----cCCceEEe
Q 007903 452 RTAKVTDLSGIKQIIQPLVESG----ALVRRT----DEELLKAL-DSFYVVEREGQIIACAALFPFF-----KEKCGEVA 517 (585)
Q Consensus 452 R~at~~D~~~I~~Li~~~~~~~----~~~~~~----~e~l~~~i-~~~~Va~~dg~IVG~~~l~~~~-----~~~~aeI~ 517 (585)
--|+.+|+++|.+|+.+..... ...+.. .+.+...- ..++|++++|++|||+.+...+ ....+.|.
T Consensus 10 ~~A~~~D~paI~~LLadd~l~~~r~d~~~~~~y~~af~ai~~dp~~~llVa~~~g~vVG~~~l~~~p~l~~~~~~~~~Ie 89 (154)
T PHA00673 10 AFAELADAPTFASLCAEYAHESANADLAGRAPDHHAYAGMEAAGVAHFLGVFRGEELVGFACLLVTPVPHFKGQLIGTTE 89 (154)
T ss_pred hhccHhhHHHHHHHHHhcccccccccccccchhHHHHHHHHhCCCcEEEEEEECCEEEEEEEEEEecCCccCCccEEEEE
Confidence 3488999999999975521110 011111 11222222 6788999999999999886433 12567899
Q ss_pred eEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCccc---Cccceeccccccc-ccCeeecCcccccccc
Q 007903 518 AIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTN---GFPFLRGRTHSYY-RLKFNCSSKSFHISLH 583 (585)
Q Consensus 518 ~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~---g~~~~~~~a~~YY-rlGF~~~~~~~~~~~~ 583 (585)
.++|+|++||+|||++||++++ ++|++.|+... ..+. .++-.|| +.|+......|+--+|
T Consensus 90 ~l~V~~~~RGqGIG~~Ll~~A~----~~Ar~~Gc~~lyis~~p~--~~tv~fy~~~g~~~~~~~~~~~~~ 153 (154)
T PHA00673 90 SIFVAAAHRPGGAGMALLRATE----ALARDLGATGLYVSGPTE--GRLVQLLPAAGYRETNRTFYRGLH 153 (154)
T ss_pred EEEEChhccCCCHHHHHHHHHH----HHHHHCCCCEEEEecCCC--ccchHHHHhCCchhhchhhhhhcc
Confidence 9999999999999999999999 99999999863 2222 2344455 7999988887776554
|
|
| >PRK03624 putative acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.9e-10 Score=101.91 Aligned_cols=118 Identities=15% Similarity=0.159 Sum_probs=83.5
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCH--HHHHhcc----CeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEc
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTD--EELLKAL----DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVS 522 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~--e~l~~~i----~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~ 522 (585)
..||+++++|++.+.+++... ....+|.. ..+...+ ..++++..++++||++.+.. ......+..++|+
T Consensus 3 ~~ir~~~~~d~~~i~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~--~~~~~~i~~i~v~ 77 (140)
T PRK03624 3 MEIRVFRQADFEAVIALWERC---DLTRPWNDPEMDIERKLNHDPSLFLVAEVGGEVVGTVMGGY--DGHRGWAYYLAVH 77 (140)
T ss_pred eEEEEcccccHHHHHHHHHhc---CCCcchhhHHHHHHHHhcCCCceEEEEEcCCcEEEEEEeec--cCCCceEEEEEEC
Confidence 468999999999999996554 22222221 1122222 45778888999999998762 2345678889999
Q ss_pred cCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee--c-ccccccccCeeecC
Q 007903 523 PECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR--G-RTHSYYRLKFNCSS 575 (585)
Q Consensus 523 PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~--~-~a~~YYrlGF~~~~ 575 (585)
|+|||+|+|++|+++++ +.+++.++......... . ....|.++||...+
T Consensus 78 p~~rg~Gig~~ll~~~~----~~~~~~~~~~~~~~~~~~N~~~~~~y~k~GF~~~~ 129 (140)
T PRK03624 78 PDFRGRGIGRALVARLE----KKLIARGCPKINLQVREDNDAVLGFYEALGYEEQD 129 (140)
T ss_pred HHHhCCCHHHHHHHHHH----HHHHHCCCCEEEEEEecCcHHHHHHHHHcCCcccc
Confidence 99999999999999999 88888888764332222 1 22345589999765
|
|
| >PRK09466 metL bifunctional aspartate kinase II/homoserine dehydrogenase II; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=9.6e-10 Score=128.06 Aligned_cols=128 Identities=20% Similarity=0.240 Sum_probs=97.2
Q ss_pred hHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeE-EEecHHHHHHHHcCC--CeEEEcCC-ccCCCCceee
Q 007903 194 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEV-KKVDVTRMRERLDGG--CLVILSNL-GYSSSGEVLN 269 (585)
Q Consensus 194 ~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v-~~v~~~~I~~lL~~G--~IPVi~~v-~~~~~G~~~n 269 (585)
.|++.|++ +..+++.+ ++.... ++ ...+ .....+.|+++++.+ .|||+++. +.+.+|++..
T Consensus 140 ~L~~~G~~----a~~ld~~~--~i~~~~--------~~-~~~i~~~~~~~~l~~~~~~~~~~v~Vv~GF~g~~~~G~~tt 204 (810)
T PRK09466 140 LLNQQGLP----AAWLDARS--FLRAER--------AA-QPQVDEGLSYPLLQQLLAQHPGKRLVVTGFISRNEAGETVL 204 (810)
T ss_pred HHHhCCCC----cEEEcHHH--heecCC--------CC-CcccchhhhHHHHHHHHhccCCeEEEeeCccccCCCCCEEE
Confidence 47888987 56665543 343321 11 1222 122357788887654 89999985 7888898876
Q ss_pred e---ChHHHHHHHHHHcCCCEEEEeeccccc---C----CCCcccccccHHHHHHHHHhhchhhhHHHHHHhhhhcccc
Q 007903 270 C---NTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDI 338 (585)
Q Consensus 270 i---d~D~lAa~lA~~L~AdkLIilTDV~gl---~----~~~~lI~~it~~e~~~li~~~~~~~~~~~~~~~~~~~~~~ 338 (585)
+ .+|..|+.||.+|+|+.+.+.|||||+ | |++++|++|+.+|+.+|..-|++ ++|+..++-+...++
T Consensus 205 LGRGGSD~tA~~la~~l~A~~v~i~tDV~Gi~taDPr~v~~A~~i~~isy~Ea~ela~~Gak--VlHp~ti~pa~~~~I 281 (810)
T PRK09466 205 LGRNGSDYSATLIGALAGVERVTIWSDVAGVYSADPRKVKDACLLPLLRLDEASELARLAAP--VLHARTLQPVSGSDI 281 (810)
T ss_pred cCCChHHHHHHHHHHHcCCCEEEEEeCCCccccCCcccCCCceEcccCCHHHHHHHHHcCcc--ccCHHHHHHHHHcCC
Confidence 6 589999999999999999999999998 4 46899999999999999999885 888988877766554
|
|
| >KOG3216 consensus Diamine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.6e-09 Score=99.47 Aligned_cols=124 Identities=21% Similarity=0.237 Sum_probs=91.2
Q ss_pred cccccccccCHHHHHHHHHHHHHccc---cccCCHHHHHhc------cCeEEEEEE---CCeEEEEEEEeeecc----CC
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGA---LVRRTDEELLKA------LDSFYVVER---EGQIIACAALFPFFK----EK 512 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~---~~~~~~e~l~~~------i~~~~Va~~---dg~IVG~~~l~~~~~----~~ 512 (585)
..||.++++|.+.+..|++++..... ....+.+.+... +..++++.. ++.++|++...+..+ ..
T Consensus 4 ~~IR~at~~D~~~i~rLikela~Fek~~~~v~~te~~l~~~~F~d~~~~~~~v~~ie~~~~~~aGf~~yf~~ystW~~k~ 83 (163)
T KOG3216|consen 4 IRIRLATPKDCEDILRLIKELAEFEKLEDQVEATEENLARDGFIDPPFKHWLVAAIETSGEVVAGFALYFNNYSTWLGKQ 83 (163)
T ss_pred eEEEecCcccHHHHHHHHHHHHHHHHhccchhhchhhhhhhhccCCCccEEEEEEEecCCCceeEEeeeecccccccccc
Confidence 57999999999999999987765433 222344555543 145666654 789999998874322 35
Q ss_pred ceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee--ccccccc-ccCeeecCc
Q 007903 513 CGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR--GRTHSYY-RLKFNCSSK 576 (585)
Q Consensus 513 ~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~--~~a~~YY-rlGF~~~~~ 576 (585)
..+|.+|||.|+|||+|+|++|++++- +.|.++|+.+.-+..+. .++..+| +.|++....
T Consensus 84 ~iYleDlyV~e~yR~kG~Gs~Ll~~va----~~A~~~G~~rv~w~vldwN~rAi~lY~k~gaq~l~~ 146 (163)
T KOG3216|consen 84 GIYLEDLYVREQYRGKGIGSKLLKFVA----EEADKLGTPRVEWVVLDWNHRAILLYEKVGAQDLKE 146 (163)
T ss_pred eEEEEeeEecchhcccChHHHHHHHHH----HHHHHcCCCcEEEEEeccchhHHHHHHHhCccccce
Confidence 679999999999999999999999999 99999999986544332 2444444 789886543
|
|
| >PF00583 Acetyltransf_1: Acetyltransferase (GNAT) family; InterPro: IPR000182 The N-acetyltransferases (NAT) (EC 2 | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.1e-09 Score=90.79 Aligned_cols=76 Identities=30% Similarity=0.386 Sum_probs=60.9
Q ss_pred EEECCeEEEEEEEeeeccC----CceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceecc--c-cc
Q 007903 493 VEREGQIIACAALFPFFKE----KCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGR--T-HS 565 (585)
Q Consensus 493 a~~dg~IVG~~~l~~~~~~----~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~--a-~~ 565 (585)
++++|++||++.+.+...+ +..+|..++|+|+|||+|+|+.|+++++ +.+++.++........... . ..
T Consensus 1 ~~~~~~ivg~~~~~~~~~~~~~~~~~~i~~~~v~~~~r~~Gig~~L~~~~~----~~~~~~g~~~i~~~~~~~n~~~~~~ 76 (83)
T PF00583_consen 1 AEEDGQIVGFASLRPPPEPFDHGNHAYIHRLAVDPEYRGQGIGSKLLQAAE----EWARKRGIKRIYLDVSPDNPAARRF 76 (83)
T ss_dssp EEETTEEEEEEEEEEEETTTTTTTEEEEEEEEECGGGTTSSHHHHHHHHHH----HHHHHTTESEEEEEEETTGHHHHHH
T ss_pred CcCCCEEEEEEEEEECCCccccCCEEEEEEEEEcHHHhhCCCchhhhhhhh----hhHHhcCccEEEEEEeCCCHHHHHH
Confidence 5789999999999865543 6899999999999999999999999999 9999988877544332222 2 34
Q ss_pred ccccCee
Q 007903 566 YYRLKFN 572 (585)
Q Consensus 566 YYrlGF~ 572 (585)
|.++||+
T Consensus 77 ~~k~Gf~ 83 (83)
T PF00583_consen 77 YEKLGFE 83 (83)
T ss_dssp HHHTTEE
T ss_pred HHHcCCC
Confidence 5579996
|
3.1.-) are enzymes that use acetyl coenzyme A (CoA) to transfer an acetyl group to a substrate, a reaction implicated in various functions from bacterial antibiotic resistance to mammalian circadian rhythm and chromatin remodeling. The Gcn5-related N-acetyltransferases (GNAT) catalyze the transfer of the acetyl from the CoA donor to a primary amine of the acceptor. The GNAT proteins share a domain composed of four conserved sequence motifs A-D [, ]. This GNAT domain is named after yeast GCN5 (from General Control Nonrepressed) and related histone acetyltransferases (HATs) like Hat1 and PCAF. HATs acetylate lysine residues of amino terminal histone tails, resulting in transcription activation. Another category of GNAT, the aminoglycoside N-acetyltransferases, confer antibiotic resistance by catalyzing the acetylation of amino groups in aminoglycoside antibiotics []. GNAT proteins can also have anabolic and catabolic functions in both prokaryotes and eukaryotes [, , , , ]. The acetyltransferase/GNAT domain forms a structurally conserved fold of 6 to 7 beta strands (B) and 4 helices (H) in the topology B1-H1-H2-B2-B3-B4-H3-B5-H4-B6, followed by a C-terminal strand which may be from the same monomer or contributed by another [, ]. Motifs D (B2-B3), A (B4-H3) and B (B5-H4) are collectively called the HAT core [, , ], while the N-terminal motif C (B1-H1) is less conserved. Some proteins known to contain a GNAT domain: Yeast GCN5 and Hat1, which are histone acetyltransferases (EC 2.3.1.48). Human PCAF, a histone acetyltransferase. Mammalian serotonin N-acetyltransferase (SNAT) or arylalkylamine NAT (AANAT), which acetylates serotonin into a circadian neurohormone that may participate in light-dark rhythms, and human mood and behavior. Mammalian glucosamine 6-phosphate N-acetyltransferase (GNA1) (EC 2.3.1.4). Escherichia coli rimI and rimJ, which acetylate the N-terminal alanine of ribosomal proteins S18 and S5, respectively (EC 2.3.1.128). Mycobacterium tuberculosis aminoglycoside 2'-N-acetyltransferase (aac), which acetylates the 2' hydroxyl or amino group of a broad spectrum of aminoglycoside antibiotics. Bacillus subtilis bltD and paiA, which acetylate spermine and spermidine. This entry represents the entire GNAT domain.; GO: 0008080 N-acetyltransferase activity, 0008152 metabolic process; PDB: 3T9Y_A 2R7H_B 2OZH_A 1Y9W_B 1VKC_B 2OH1_C 3R9E_B 3R9G_B 3R9F_A 3R96_A .... |
| >PRK09491 rimI ribosomal-protein-alanine N-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.8e-09 Score=99.79 Aligned_cols=117 Identities=20% Similarity=0.176 Sum_probs=83.4
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHHhcc--C-eEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCC
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--D-SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPEC 525 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i--~-~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~Pey 525 (585)
++||+++++|++.+.++.. .....+|..+.+.... . ..+++..++++||++.+.... ...++..++|+|+|
T Consensus 2 ~~iR~~~~~D~~~l~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~--~~~~~~~i~v~~~~ 75 (146)
T PRK09491 2 NTISSLTPADLPAAYHIEQ----RAHAFPWSEKTFASNQGERYLNLKLTVNGQMAAFAITQVVL--DEATLFNIAVDPDY 75 (146)
T ss_pred cchhcCChhhhHHHHHHHH----hcCCCCCCHHHHHHHHhcCceEEEEEECCeEEEEEEEEeec--CceEEEEEEECHHH
Confidence 4799999999999999842 2333456655554332 2 234456889999999887432 35678899999999
Q ss_pred cCCcHHHHHHHHHHhhhHHHHHHcCCcccCccc---eecccccccccCeeecC
Q 007903 526 RGQGQGDKLLGLCIWPLLSETRYDHISTNGFPF---LRGRTHSYYRLKFNCSS 575 (585)
Q Consensus 526 RGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~---~~~~a~~YYrlGF~~~~ 575 (585)
||+|+|+.|++.++ +.+++.++....... .....+.|.++||+..+
T Consensus 76 rg~G~g~~ll~~~~----~~~~~~~~~~~~~~~~~~N~~a~~~y~k~Gf~~~~ 124 (146)
T PRK09491 76 QRQGLGRALLEHLI----DELEKRGVATLWLEVRASNAAAIALYESLGFNEVT 124 (146)
T ss_pred ccCCHHHHHHHHHH----HHHHHCCCcEEEEEEccCCHHHHHHHHHcCCEEee
Confidence 99999999999999 888888876533221 11233456689998654
|
|
| >TIGR02382 wecD_rffC TDP-D-fucosamine acetyltransferase | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.8e-09 Score=105.00 Aligned_cols=124 Identities=15% Similarity=0.190 Sum_probs=85.7
Q ss_pred cccccccccCHHHHHHHHHHHHHc-cccccCC-HHH----H----Hhcc-----Ce-EEEEEECCeEEEEEEEeeeccCC
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVES-GALVRRT-DEE----L----LKAL-----DS-FYVVEREGQIIACAALFPFFKEK 512 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~-~~~~~~~-~e~----l----~~~i-----~~-~~Va~~dg~IVG~~~l~~~~~~~ 512 (585)
..||+++++|++.+.+++...... .+..+|. ++. + .... .. +++.+.+|++||++.+... ...
T Consensus 44 ~~lR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~iiG~i~l~~~-~~~ 122 (191)
T TIGR02382 44 PGARVATETDIPALRQLASAAFALSRFRAPWYAPDDSGRFYAQWVENAVRGTFDHQCLILRDASGDPRGYVTLREL-NDT 122 (191)
T ss_pred CcceeCChhhHHHHHHHHHHHhhccccCCCCcCHHHHHHHHHHHHHHHhcCCCCCeEEEEEccCCeEEEEEEEEec-CCC
Confidence 589999999999999998765321 1222221 111 1 1111 12 3344668899999998743 345
Q ss_pred ceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccc--eeccccccc-ccCeeecCcc
Q 007903 513 CGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPF--LRGRTHSYY-RLKFNCSSKS 577 (585)
Q Consensus 513 ~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~--~~~~a~~YY-rlGF~~~~~~ 577 (585)
.++|..++|+|+|||+|+|++|+++++ ++++++|+....... .+..+..|| |+||+..+.-
T Consensus 123 ~~~i~~l~V~p~~rGkG~G~~ll~~~~----~~a~~~g~~~I~l~v~~~N~~A~~~Y~klGF~~~~~~ 186 (191)
T TIGR02382 123 DARIGLLAVFPGAQSRGIGAELMQTAL----NWCYARGLTRLRVATQMGNTAALRLYIRSGANIESTA 186 (191)
T ss_pred ceEEEEEEECHHHcCCCHHHHHHHHHH----HHHHHcCCCEEEEEeCCCCHHHHHHHHHcCCccccce
Confidence 689999999999999999999999999 888888987654322 223445555 7999977653
|
This model represents the WecD protein (Formerly RffC) for the biosynthesis of enterobacterial common antigen (ECA), an outer leaflet, outer membrane glycolipid with a trisaccharide repeat unit. WecD is a member of the GNAT family of acetytransferases (pfam00583). |
| >TIGR02406 ectoine_EctA L-2,4-diaminobutyric acid acetyltransferase | Back alignment and domain information |
|---|
Probab=98.96 E-value=2.1e-09 Score=101.46 Aligned_cols=119 Identities=16% Similarity=0.171 Sum_probs=78.0
Q ss_pred cccccccCHHHHHHHHHHHHHccccccCCHHHHHhcc-CeEEEEE-ECCeEEEEEEEeeec-cCCceEEeeEEEccCCcC
Q 007903 451 TRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL-DSFYVVE-REGQIIACAALFPFF-KEKCGEVAAIGVSPECRG 527 (585)
Q Consensus 451 IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i-~~~~Va~-~dg~IVG~~~l~~~~-~~~~aeI~~L~V~PeyRG 527 (585)
||+++.+|++++.+|.................+.... ..+++++ .++++||++.+.... ..+..++..++|+|+|||
T Consensus 1 IR~~~~~D~~~i~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~i~~l~V~p~~rg 80 (157)
T TIGR02406 1 FRPPRIEDGAGIWELVKDCPPLDLNSSYAYLLLCTDFADTSIVAESEGGEIVGFVSGYLRPDRPDVLFVWQVAVDPRARG 80 (157)
T ss_pred CCCCccccHHHHHHHHHhCCCCCcccceehhhhhhhcCCcEEEEEcCCCeEEEEEEEEecCCCCCeEEEEEEEEChHhcc
Confidence 7999999999999996543211100000111122222 4466776 478999998765322 234678999999999999
Q ss_pred CcHHHHHHHHHHhhhHHHHHHcCCcccCccc--eecccc-cccccCeee
Q 007903 528 QGQGDKLLGLCIWPLLSETRYDHISTNGFPF--LRGRTH-SYYRLKFNC 573 (585)
Q Consensus 528 kGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~--~~~~a~-~YYrlGF~~ 573 (585)
+|+|++|+++++ ++++..++....... .+..++ .|.++||+-
T Consensus 81 ~GiG~~L~~~l~----~~a~~~~~~~i~~~v~~~N~~a~~ly~k~G~~~ 125 (157)
T TIGR02406 81 KGLARRLLEALL----ERVACERVRHLETTITPDNQASRALFKALARRR 125 (157)
T ss_pred CcHHHHHHHHHH----HHHHhCCCCEEEEEEcCCCHHHHHHHHHhCccc
Confidence 999999999999 888877776532211 123333 455799964
|
This enzyme family is the EctA of ectoine biosynthesis. Ectoine is a compatible solute, analagous to trehalose, betaines, etc., found often in halotolerant organisms. EctA is L-2,4-diaminobutyric acid acetyltransferase, also called DABA acetyltransferase. |
| >PRK10140 putative acetyltransferase YhhY; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=4.9e-09 Score=97.80 Aligned_cols=123 Identities=14% Similarity=0.145 Sum_probs=82.2
Q ss_pred cccccccccCHHHHHHHHHHHHHcc---ccccCCHHHHHhcc-----CeEEEEEECCeEEEEEEEeeeccC---CceEEe
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESG---ALVRRTDEELLKAL-----DSFYVVEREGQIIACAALFPFFKE---KCGEVA 517 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~---~~~~~~~e~l~~~i-----~~~~Va~~dg~IVG~~~l~~~~~~---~~aeI~ 517 (585)
..||+++++|++.+.++........ ...+.+.+.+...+ ..+++++.++++||++.+.....+ ..+++
T Consensus 4 i~lr~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~~~- 82 (162)
T PRK10140 4 IVIRHAETRDYEAIRQIHAQPEVYHNTLQVPHPSDHMWQERLADRPGIKQLVACIDGDVVGHLTIDVQQRPRRSHVADF- 82 (162)
T ss_pred cEEEecchhhHHHHHHHHhCcccccccccCCCcCHHHHHHHhhcCCCcEEEEEEECCEEEEEEEEecccccccceEEEE-
Confidence 5799999999999999965321111 11122344444433 346788889999999998743221 23444
Q ss_pred eEEEccCCcCCcHHHHHHHHHHhhhHHHHHH-cCCcccCccce--eccc-ccccccCeeecCc
Q 007903 518 AIGVSPECRGQGQGDKLLGLCIWPLLSETRY-DHISTNGFPFL--RGRT-HSYYRLKFNCSSK 576 (585)
Q Consensus 518 ~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~-~gi~~~g~~~~--~~~a-~~YYrlGF~~~~~ 576 (585)
.++|+|+|||+|+|++|++.++ +++++ .++........ +..+ ..|.++||+..+.
T Consensus 83 ~~~v~p~~rg~Gig~~ll~~l~----~~~~~~~~~~~i~l~v~~~N~~a~~~y~k~GF~~~g~ 141 (162)
T PRK10140 83 GICVDSRWKNRGVASALMREMI----EMCDNWLRVDRIELTVFVDNAPAIKVYKKYGFEIEGT 141 (162)
T ss_pred EEEECHHHcCCCHHHHHHHHHH----HHHHhhCCccEEEEEEEcCCHHHHHHHHHCCCEEEee
Confidence 4899999999999999999999 77776 57665433222 2233 3455799998755
|
|
| >PRK10975 TDP-fucosamine acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.92 E-value=6.4e-09 Score=101.27 Aligned_cols=127 Identities=17% Similarity=0.251 Sum_probs=87.0
Q ss_pred ccccccccccCHHHHHHHHHHHHH-ccccccC-CHH-------HH-Hhcc-----CeEEEEE-ECCeEEEEEEEeeeccC
Q 007903 448 YEGTRTAKVTDLSGIKQIIQPLVE-SGALVRR-TDE-------EL-LKAL-----DSFYVVE-REGQIIACAALFPFFKE 511 (585)
Q Consensus 448 ~~~IR~at~~D~~~I~~Li~~~~~-~~~~~~~-~~e-------~l-~~~i-----~~~~Va~-~dg~IVG~~~l~~~~~~ 511 (585)
...||+++++|++.+.++...... ..+..+| +.+ .+ .... ..++++. .++++||++.+... ..
T Consensus 46 ~~~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~~vG~~~l~~~-~~ 124 (194)
T PRK10975 46 TTGARVATETDIPALRQLAAQAFAQSRFRAPWYAPDDSGRFYAQWIENAVRGTFDHQCLLLRDASGQIQGFVTLREL-ND 124 (194)
T ss_pred CCCcccCCcccHHHHHHHHHHHhhhccccCccCChhHHHHHHHHHHHHhhccccCCcEEEEEcCCCCEEEEEEEEec-CC
Confidence 367999999999999999876432 2222222 111 11 1111 1344554 56899999998743 34
Q ss_pred CceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccce--eccccc-ccccCeeecCcccc
Q 007903 512 KCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFL--RGRTHS-YYRLKFNCSSKSFH 579 (585)
Q Consensus 512 ~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~--~~~a~~-YYrlGF~~~~~~~~ 579 (585)
..++|..++|+|+|||+|+|++|+++++ +++++.|+........ +..+.. |.++||+..+..|.
T Consensus 125 ~~~~i~~~~V~p~~rg~Gig~~Ll~~~~----~~a~~~g~~~i~l~v~~~N~~a~~~yek~Gf~~~~~~~~ 191 (194)
T PRK10975 125 TDARIGLLAVFPGAQGRGIGARLMQAAL----NWCQARGLTRLRVATQMGNLAALRLYIRSGANIESTAYW 191 (194)
T ss_pred CceEEEEEEEChhhcCCCHHHHHHHHHH----HHHHHcCCCEEEEEeCCCcHHHHHHHHHCCCeEeEEEee
Confidence 5688999999999999999999999999 8888888876533221 223344 55799998776553
|
|
| >PRK10514 putative acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=3.5e-09 Score=97.38 Aligned_cols=116 Identities=17% Similarity=0.217 Sum_probs=74.4
Q ss_pred cccccccccCHHHHHHHHHHHHH--ccccccCCHHHHHhcc------CeEEEE-EECCeEEEEEEEeeeccCCceEEeeE
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVE--SGALVRRTDEELLKAL------DSFYVV-EREGQIIACAALFPFFKEKCGEVAAI 519 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~--~~~~~~~~~e~l~~~i------~~~~Va-~~dg~IVG~~~l~~~~~~~~aeI~~L 519 (585)
..||+++++|++++.+++..... ..+..+...+.+...+ ..++++ ..++++||++.+.. .++..+
T Consensus 2 ~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~~~~~------~~~~~~ 75 (145)
T PRK10514 2 ISIRRSRHEEGERLVAIWRRSVDATHDFLSAEDRAEIEELVRSFLPEAPLWVAVDERDQPVGFMLLSG------GHMEAL 75 (145)
T ss_pred ceeeecchhhHHHHHHHHHHHHHHhCcccCchhHHHHHHHHHHHhccCceEEEEecCCcEEEEEEEec------CcEeEE
Confidence 46899999999999999765332 1122233333333222 234444 46899999988752 346789
Q ss_pred EEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceecccccccccCeeecCc
Q 007903 520 GVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYYRLKFNCSSK 576 (585)
Q Consensus 520 ~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YYrlGF~~~~~ 576 (585)
+|+|+|||+|+|++||++++ +.+....+.. ..........|.|+||+..+.
T Consensus 76 ~v~p~~rgkGig~~Ll~~~~----~~~~~i~~~v--~~~N~~a~~~yek~Gf~~~~~ 126 (145)
T PRK10514 76 FVDPDVRGCGVGRMLVEHAL----SLHPELTTDV--NEQNEQAVGFYKKMGFKVTGR 126 (145)
T ss_pred EECHHhccCCHHHHHHHHHH----HhccccEEEe--ecCCHHHHHHHHHCCCEEecc
Confidence 99999999999999999999 5543322111 111112333455899998754
|
|
| >PRK10314 putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=3.2e-09 Score=99.93 Aligned_cols=122 Identities=11% Similarity=0.102 Sum_probs=78.0
Q ss_pred cccccccCHHHHHHHHHHHHHccccccCCHHHHHhc----cCeEEEEEECCeEEEEEEEeeecc-CCceEEeeEEEccCC
Q 007903 451 TRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKA----LDSFYVVEREGQIIACAALFPFFK-EKCGEVAAIGVSPEC 525 (585)
Q Consensus 451 IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~----i~~~~Va~~dg~IVG~~~l~~~~~-~~~aeI~~L~V~Pey 525 (585)
+...+.+++.++..|.....-.....+.. +++.. ....+++..++++||++.+.+..+ ....+|..++|+|+|
T Consensus 9 ~~~l~~~~~~~~~~lR~~VF~~eq~~~~~--e~D~~d~~~~~~h~~~~~~~~~vg~~r~~~~~~~~~~~~i~rv~V~~~~ 86 (153)
T PRK10314 9 HSELSVSQLYALLQLRCAVFVVEQNCPYQ--DIDGDDLTGDNRHILGWKNDELVAYARILKSDDDLEPVVIGRVIVSEAL 86 (153)
T ss_pred hhhCCHHHHHHHHHHHHHHhhhhcCCCcc--ccCCCCCCCCcEEEEEEECCEEEEEEEEecCCCCCCCEEEEEEEECHHH
Confidence 45566667777777755443222212211 22221 234566778999999999975322 235799999999999
Q ss_pred cCCcHHHHHHHHHHhhhHHHHHHc-CCcccCccceeccccccc-ccCeeecCcccc
Q 007903 526 RGQGQGDKLLGLCIWPLLSETRYD-HISTNGFPFLRGRTHSYY-RLKFNCSSKSFH 579 (585)
Q Consensus 526 RGkGIGk~LL~~~~~~a~~~A~~~-gi~~~g~~~~~~~a~~YY-rlGF~~~~~~~~ 579 (585)
||+|+|++||++++ +++++. +.....+.. +..+..|| ++||+..+..|.
T Consensus 87 rG~GiG~~Lm~~~~----~~~~~~~~~~~i~L~a-~~~a~~fY~k~GF~~~g~~f~ 137 (153)
T PRK10314 87 RGEKVGQQLMSKTL----ESCTRHWPDKPVYLGA-QAHLQNFYQSFGFIPVTEVYE 137 (153)
T ss_pred hCCCHHHHHHHHHH----HHHHHHCCCCcEEEeh-HHHHHHHHHHCCCEECCCccc
Confidence 99999999999999 766654 433322222 12233455 799999987663
|
|
| >PF13508 Acetyltransf_7: Acetyltransferase (GNAT) domain; PDB: 3EY5_A 3FRM_B 3D8P_B 3GY9_A 3GYA_A 3S6F_A 2Q7B_A 1CM0_B 1XEB_B 1Y7R_A | Back alignment and domain information |
|---|
Probab=98.89 E-value=4e-09 Score=87.44 Aligned_cols=75 Identities=31% Similarity=0.616 Sum_probs=56.8
Q ss_pred eEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceeccccccc-
Q 007903 489 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYY- 567 (585)
Q Consensus 489 ~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YY- 567 (585)
.+++++++++++|++.+.+ .++..+|..++|+|+|||+|+|++||+++. +.++...+.. .-......||
T Consensus 4 ~~~~~~~~~~ivG~~~~~~--~~~~~~i~~~~v~~~~rg~Gig~~ll~~~~----~~~~~~~i~l----~~~~~~~~fY~ 73 (79)
T PF13508_consen 4 RFFVAEDDGEIVGFIRLWP--NEDFAYIGYLAVDPEYRGKGIGSKLLNYLL----EKAKSKKIFL----FTNPAAIKFYE 73 (79)
T ss_dssp EEEEEEETTEEEEEEEEEE--TTTEEEEEEEEE-GGGTTSSHHHHHHHHHH----HHHTCSEEEE----EEEHHHHHHHH
T ss_pred EEEEEEECCEEEEEEEEEE--cCCEEEEEEEEECHHHcCCCHHHHHHHHHH----HHcCCCcEEE----EEcHHHHHHHH
Confidence 5788999999999999974 345889999999999999999999999998 6664433321 1123444455
Q ss_pred ccCeee
Q 007903 568 RLKFNC 573 (585)
Q Consensus 568 rlGF~~ 573 (585)
++||+.
T Consensus 74 ~~GF~~ 79 (79)
T PF13508_consen 74 KLGFEE 79 (79)
T ss_dssp HTTEEE
T ss_pred HCcCCC
Confidence 799974
|
... |
| >PRK01346 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=7.1e-09 Score=112.63 Aligned_cols=126 Identities=15% Similarity=0.092 Sum_probs=87.0
Q ss_pred ccccccccccCHHHHHHHHHHHHHccccccCCHHHHHhcc--CeEEEEEECCeEEEEEEEeeec-----c--CCceEEee
Q 007903 448 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--DSFYVVEREGQIIACAALFPFF-----K--EKCGEVAA 518 (585)
Q Consensus 448 ~~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i--~~~~Va~~dg~IVG~~~l~~~~-----~--~~~aeI~~ 518 (585)
.++||+++++|++++.+|......... .....+.+.... ..++++++++++||++.+.++. . -+.+.|..
T Consensus 6 ~~~iR~~~~~D~~~i~~L~~~~f~~~~-~~~~~~~~~~~~~~~~~~va~~~~~lvg~~~~~~~~~~~~~~~~~~~~~i~~ 84 (411)
T PRK01346 6 AITIRTATEEDWPAWFRAAATGFGDSP-SDEELEAWRALVEPDRTLGAFDGDEVVGTAGAFDLRLTVPGGAVLPAAGVTA 84 (411)
T ss_pred CceeecCCHHHHHHHHHHHHHHcCCCC-ChHHHHHHHHhcCcCCeEEEEECCEEEEEEEEeccccccCCCCccceeEEEE
Confidence 367999999999999999654322111 111112222222 4567888999999999987432 1 14688999
Q ss_pred EEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceecccccccccCeeecCccccc
Q 007903 519 IGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYYRLKFNCSSKSFHI 580 (585)
Q Consensus 519 L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YYrlGF~~~~~~~~~ 580 (585)
++|+|+|||+|+|++||++++ +.+++.|+....+.. .....|.++||.........
T Consensus 85 v~V~P~~RgrGig~~Ll~~~l----~~a~~~g~~~~~L~~--~~~~~Y~r~Gf~~~~~~~~~ 140 (411)
T PRK01346 85 VTVAPTHRRRGLLTALMREQL----RRIRERGEPVAALTA--SEGGIYGRFGYGPATYSQSL 140 (411)
T ss_pred EEEChhhcCCCHHHHHHHHHH----HHHHHCCCcEEEEEC--CchhhHhhCCCeeccceEEE
Confidence 999999999999999999999 889988886543321 12234557999988654433
|
|
| >COG3153 Predicted acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.88 E-value=2.3e-08 Score=95.25 Aligned_cols=120 Identities=21% Similarity=0.282 Sum_probs=86.1
Q ss_pred ccccccccccCHHHHHHHHHHHHHccccccCCHHHHHhcc----CeEEEEEECCeEEEEEEEeeeccC----CceEEeeE
Q 007903 448 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFFKE----KCGEVAAI 519 (585)
Q Consensus 448 ~~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i----~~~~Va~~dg~IVG~~~l~~~~~~----~~aeI~~L 519 (585)
++.||..++.|++.+.++.+.....+.. ....+.+.... ..-+|+++||++||.+.+++..-. ...-+.-+
T Consensus 3 ~~~ir~e~~~d~~~i~~~~~~aF~~~~e-~~~v~~lR~~~~~~~~LslVA~d~g~vvG~Il~s~v~~~g~~~~~~~LaPL 81 (171)
T COG3153 3 MMLIRTETPADIPAIEALTREAFGPGRE-AKLVDKLREGGRPDLTLSLVAEDDGEVVGHILFSPVTVGGEELGWLGLAPL 81 (171)
T ss_pred ccEEEecChhhHHHHHHHHHHHhhcchH-HHHHHHHHhcCCcccceeEEEeeCCEEEEEEEEeEEEecCcccceEEEEeE
Confidence 4679999999999999996554431110 01122233222 456889999999999999864322 33457789
Q ss_pred EEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceecccccccccCeeecC
Q 007903 520 GVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYYRLKFNCSS 575 (585)
Q Consensus 520 ~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YYrlGF~~~~ 575 (585)
+|+|+|||||||++|+...+ +.++..|.... .+-+...+|-|+||+...
T Consensus 82 aV~p~~qg~GIG~~Lvr~~l----e~a~~~G~~~v---~vlGdp~YY~rfGF~~~~ 130 (171)
T COG3153 82 AVDPEYQGQGIGSALVREGL----EALRLAGASAV---VVLGDPTYYSRFGFEPAA 130 (171)
T ss_pred EEchhhcCCcHHHHHHHHHH----HHHHHCCCCEE---EEecCcccccccCcEEcc
Confidence 99999999999999999999 99999998753 233455444589999874
|
|
| >COG1247 Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.3e-08 Score=96.70 Aligned_cols=124 Identities=26% Similarity=0.221 Sum_probs=90.5
Q ss_pred cccccccccCHHHHHHHHHHHHHccc----cccCCHHHHHhcc-------CeEEEEEEC-CeEEEEEEEeeeccC---Cc
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGA----LVRRTDEELLKAL-------DSFYVVERE-GQIIACAALFPFFKE---KC 513 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~----~~~~~~e~l~~~i-------~~~~Va~~d-g~IVG~~~l~~~~~~---~~ 513 (585)
+.||+++.+|++.|.++++....... ..+.+.+.+...+ -.++|++.+ |+++|++.+.++... ..
T Consensus 2 ~~ir~~~~~Dl~~I~~IY~~~v~~~~a~~e~~~~~~~~~~~~~~~~~~~g~p~~V~~~~~g~v~G~a~~~~fr~r~ay~~ 81 (169)
T COG1247 2 MEIRPATAADLEAILEIYNGAVENTAATFEEDPVSLEERAAWFSGRTRDGYPVVVAEEEDGKVLGYASAGPFRERPAYRH 81 (169)
T ss_pred cEEecChHHhHHHHHHHHHHhhhcceEEEeccCCCHHHHHHHHHhcccCCceEEEEEcCCCeEEEEEEeeeccCccccce
Confidence 46999999999999999988776653 2344555555433 256777665 999999999865321 11
Q ss_pred eEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccC---ccceecccccccccCeeecCc
Q 007903 514 GEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNG---FPFLRGRTHSYYRLKFNCSSK 576 (585)
Q Consensus 514 aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g---~~~~~~~a~~YYrlGF~~~~~ 576 (585)
.--.++||+|++||+|+|++||+.++ +.++.+|+.+.- +.........+.++||+..+.
T Consensus 82 tve~SiYv~~~~~g~GiG~~Ll~~Li----~~~~~~g~~~lva~I~~~n~aSi~lh~~~GF~~~G~ 143 (169)
T COG1247 82 TVELSIYLDPAARGKGLGKKLLQALI----TEARALGVRELVAGIESDNLASIALHEKLGFEEVGT 143 (169)
T ss_pred EEEEEEEECcccccccHHHHHHHHHH----HHHHhCCeEEEEEEEcCCCcHhHHHHHHCCCEEecc
Confidence 22347999999999999999999999 999999997641 111224455688899987754
|
|
| >TIGR01575 rimI ribosomal-protein-alanine acetyltransferase | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.1e-08 Score=91.49 Aligned_cols=109 Identities=21% Similarity=0.266 Sum_probs=76.1
Q ss_pred CHHHHHHHHHHHHHccccccCCHHHHHhcc----CeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCCcCCcHHHH
Q 007903 458 DLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDK 533 (585)
Q Consensus 458 D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i----~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGkGIGk~ 533 (585)
|++++.++. ...+..+++.+.+...+ ..++++.+++++||++.+.. .....++..++|+|+|||+|+|++
T Consensus 1 d~~~i~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~--~~~~~~i~~~~v~~~~rg~G~g~~ 74 (131)
T TIGR01575 1 DLKAVLEIE----AAAFAFPWTEAQFAEELANYHLCYLLARIGGKVVGYAGVQI--VLDEAHILNIAVKPEYQGQGIGRA 74 (131)
T ss_pred CHHHHHHHH----HhhCCCCCCHHHHHHHhcCCCceEEEEecCCeEEEEEEEEe--cCCCeEEEEEEECHHHcCCCHHHH
Confidence 567777773 33444466666665554 34566777899999999774 234678899999999999999999
Q ss_pred HHHHHHhhhHHHHHHcCCcccCccc--eecccc-cccccCeeecCc
Q 007903 534 LLGLCIWPLLSETRYDHISTNGFPF--LRGRTH-SYYRLKFNCSSK 576 (585)
Q Consensus 534 LL~~~~~~a~~~A~~~gi~~~g~~~--~~~~a~-~YYrlGF~~~~~ 576 (585)
|+++++ +.+.+.++...-... .+..+. .|.++||+..+.
T Consensus 75 ll~~~~----~~~~~~~~~~i~~~~~~~n~~~~~~y~~~Gf~~~~~ 116 (131)
T TIGR01575 75 LLRELI----DEAKGRGVNEIFLEVRVSNIAAQALYKKLGFNEIAI 116 (131)
T ss_pred HHHHHH----HHHHHcCCCeEEEEEecccHHHHHHHHHcCCCcccc
Confidence 999999 888887765542211 112233 455799987644
|
Members of this model belong to the GCN5-related N-acetyltransferase (GNAT) superfamily. This model covers prokarotes and the archaea. The seed contains a characterized accession for Gram negative E. coli. An untraceable characterized accession (PIR|S66013) for Gram positive B. subtilis scores well (205.0) in the full alignment. Characterized members are lacking in the archaea. Noise cutoff (72.4) was set to exclude M. loti paralog of rimI. Trusted cutoff (80.0) was set at next highest scoring member in the mini-database. |
| >TIGR03103 trio_acet_GNAT GNAT-family acetyltransferase TIGR03103 | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.1e-08 Score=115.10 Aligned_cols=165 Identities=19% Similarity=0.174 Sum_probs=105.3
Q ss_pred HHHHHHHHHHHHcCCCeEEEecCccchhhH----HHHHhcCCCceee------ccc----cccccccc-cccCHHHHHHH
Q 007903 401 LSELAAAAFVCRRGVQRVHLLDGTIGGVLL----LELFKRDGMGTMV------ASD----LYEGTRTA-KVTDLSGIKQI 465 (585)
Q Consensus 401 ~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll----~el~~~~~~GT~i------~~d----~~~~IR~a-t~~D~~~I~~L 465 (585)
..+|..++..=+.|-.-+.+. -+.|+.+| +|||-+ ..-|.= .+. ..+.||++ +++|++++.+|
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~IR~~~~~~D~~~I~~L 100 (547)
T TIGR03103 23 PQELAEALREEGPGRRDIALY-VRDPHVVLALAPQELFLD-PSHTYRLWLTQYRPAARTPRGFTVRRLRGPADVDAINRL 100 (547)
T ss_pred HHHHHHHHHhcCCCCcceEEE-ecCchhhhhhCcHhhccC-chhceEeccccCCcCcCCCCCcEEEeCCChhHHHHHHHH
Confidence 345666666555554433322 34566544 345542 222210 111 12679997 78999999999
Q ss_pred HHHHHHccccccCCHHHHHhcc----CeEEEEEE--CCeEEEEEEEeee----c-cCCceEEeeEEEccCCcCCcHHHHH
Q 007903 466 IQPLVESGALVRRTDEELLKAL----DSFYVVER--EGQIIACAALFPF----F-KEKCGEVAAIGVSPECRGQGQGDKL 534 (585)
Q Consensus 466 i~~~~~~~~~~~~~~e~l~~~i----~~~~Va~~--dg~IVG~~~l~~~----~-~~~~aeI~~L~V~PeyRGkGIGk~L 534 (585)
++. ..+.+++.+.+...+ ..+++++. +|++|||+..... . ....++|..|+|+|+|||+|||++|
T Consensus 101 ~~~----~~~~p~~~~~~~~~~~~~~~~~~vA~~~~~g~IVG~~~~~~~~~~~~d~~~~~~i~~l~V~P~~Rg~GIG~~L 176 (547)
T TIGR03103 101 YAA----RGMVPVRVDFVLDHRHSRAITYLVAEDEASGAIIGTVMGVDHRKAFNDPEHGSSLWCLAVDPQAAHPGVGEAL 176 (547)
T ss_pred HHh----cCCCCCCHHHHHHHhcCCCceEEEEEECCCCeEEEEEEEEeccccccCCCCCeEEEEEEECHHHcCCCHHHHH
Confidence 644 233455555554433 45778875 6899999875321 1 1235789999999999999999999
Q ss_pred HHHHHhhhHHHHHHcCCcccCccce--eccccccc-ccCeeecC
Q 007903 535 LGLCIWPLLSETRYDHISTNGFPFL--RGRTHSYY-RLKFNCSS 575 (585)
Q Consensus 535 L~~~~~~a~~~A~~~gi~~~g~~~~--~~~a~~YY-rlGF~~~~ 575 (585)
|++++ +++++.|+....+... +..+..|| ++||+...
T Consensus 177 l~~l~----e~a~~~G~~~i~L~V~~~N~~Ai~fY~klGf~~~~ 216 (547)
T TIGR03103 177 VRALA----EHFQSRGCAYMDLSVMHDNEQAIALYEKLGFRRIP 216 (547)
T ss_pred HHHHH----HHHHHCCCCEEEEEEcCCCHHHHHHHHHCCCEEee
Confidence 99999 8899999887654332 23444455 79998764
|
Members of this protein family belong to the GNAT family of acetyltransferases. Each is part of a conserved three-gene cassette sparsely distributed across at least twenty different species known so far, including alpha, beta, and gamma Proteobacteria, Mycobacterium, and Prosthecochloris, which is a member of the Chlorobi. The other two members of the cassette are a probable protease and an asparagine synthetase family protein. |
| >PF13420 Acetyltransf_4: Acetyltransferase (GNAT) domain; PDB: 3DR8_A 3DR6_A 2AE6_B 2JLM_C 2J8R_A 1YVO_B 2J8M_A 2J8N_A 2BL1_A 3IWG_A | Back alignment and domain information |
|---|
Probab=98.86 E-value=2.4e-08 Score=92.74 Aligned_cols=121 Identities=23% Similarity=0.322 Sum_probs=79.7
Q ss_pred cccccccCHHHHHHHHHHHHHcccccc----CCHHHHHhcc--------CeEEEEEE-CCeEEEEEEEeeecc-CCceEE
Q 007903 451 TRTAKVTDLSGIKQIIQPLVESGALVR----RTDEELLKAL--------DSFYVVER-EGQIIACAALFPFFK-EKCGEV 516 (585)
Q Consensus 451 IR~at~~D~~~I~~Li~~~~~~~~~~~----~~~e~l~~~i--------~~~~Va~~-dg~IVG~~~l~~~~~-~~~aeI 516 (585)
||+++++|++.+.++++.......... .+.+..+..+ ..++++.. +|++||++.+..... ...+++
T Consensus 1 IR~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~iiG~~~~~~~~~~~~~~~~ 80 (155)
T PF13420_consen 1 IRPATEEDLEEILKLYNEPRHEYFFTFEYPEDSEESFERWIESIIDSSKQRLFLVAEEDGKIIGYVSLRDIDPYNHTAEL 80 (155)
T ss_dssp EEE--GGGHHHHHHHHHHHHHHTSSSSCSSHS-HHHHHHHHHHHHHHHTTEEEEEEECTTEEEEEEEEEESSSGTTEEEE
T ss_pred CCCCcHHHHHHHHHHHhhhhhcceeEecCCCCCHHHHHHHHHHhcccCCCcEEEEEEcCCcEEEEEEEEeeeccCCEEEE
Confidence 799999999999999876433232211 1222222111 44555555 999999999985433 345555
Q ss_pred eeEEEccCCcCCcHHHHHHHHHHhhhHHHH-HHcCCcccCccce--eccc-ccccccCeeecCc
Q 007903 517 AAIGVSPECRGQGQGDKLLGLCIWPLLSET-RYDHISTNGFPFL--RGRT-HSYYRLKFNCSSK 576 (585)
Q Consensus 517 ~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A-~~~gi~~~g~~~~--~~~a-~~YYrlGF~~~~~ 576 (585)
.++|.|+||++|+|+.|++.++ +.| ++.|+...-.... +..+ ..|.++||+..+.
T Consensus 81 -~~~v~~~~~~~gig~~l~~~l~----~~af~~~~~~~i~~~v~~~N~~~i~~~~~~GF~~~g~ 139 (155)
T PF13420_consen 81 -SIYVSPDYRGKGIGRKLLDELI----EYAFKELGIHKIYLEVFSSNEKAINFYKKLGFEEEGE 139 (155)
T ss_dssp -EEEEEGGGTTSSHHHHHHHHHH----HHH-HHTT-CEEEEEEETT-HHHHHHHHHTTEEEEEE
T ss_pred -eeEEChhHCCCcHHHHHHHHHH----HHhhhccCeEEEEEEEecCCHHHHHHHHhCCCEEEEE
Confidence 4899999999999999999999 999 8999987543222 2233 3455799997743
|
... |
| >KOG3396 consensus Glucosamine-phosphate N-acetyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.4e-08 Score=91.45 Aligned_cols=127 Identities=17% Similarity=0.210 Sum_probs=96.6
Q ss_pred cccccccccCHHH-HHHHHHHHHHccccccCCHHHHHhcc-------C-eEE-EEEE--CCeEEEEEEEeee-----ccC
Q 007903 449 EGTRTAKVTDLSG-IKQIIQPLVESGALVRRTDEELLKAL-------D-SFY-VVER--EGQIIACAALFPF-----FKE 511 (585)
Q Consensus 449 ~~IR~at~~D~~~-I~~Li~~~~~~~~~~~~~~e~l~~~i-------~-~~~-Va~~--dg~IVG~~~l~~~-----~~~ 511 (585)
..+|+...+|+.. ..+++.++...+.. +++++...+ + .+. |+++ .++|||.+.+..- ...
T Consensus 7 ~~lR~L~~~D~~kGf~elL~qLT~vG~v---t~e~F~krf~~mk~~~~~Y~i~Vied~~s~~vigtatL~IE~KfIh~~g 83 (150)
T KOG3396|consen 7 FKLRPLEEDDYGKGFIELLKQLTSVGVV---TREQFEKRFEAMKKSGDWYYIVVIEDKESEKVIGTATLFIERKFIHGCG 83 (150)
T ss_pred eEEeecccccccchHHHHHHHHhhcccc---CHHHHHHHHHHHHhcCCcEEEEEEEeCCcCeEEEEEEEEEehhhhhccc
Confidence 5799999999986 88887777776665 345554443 3 333 3333 3799999998631 124
Q ss_pred CceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceecccccccccCeeecCccccccc
Q 007903 512 KCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYYRLKFNCSSKSFHISL 582 (585)
Q Consensus 512 ~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YYrlGF~~~~~~~~~~~ 582 (585)
..++|.++.|+++|||+++|+.|++.+. ..++++|++...+........+|.+.||.-.+..|.+++
T Consensus 84 ~rGhiEDVVV~~~~rgk~LGkllv~~Lv----~l~k~lgcYKi~LdC~~~nv~FYeKcG~s~~~~~M~~r~ 150 (150)
T KOG3396|consen 84 SRGHIEDVVVDSEYRGKQLGKLLVETLV----DLAKSLGCYKIILDCDPKNVKFYEKCGYSNAGNEMTKRF 150 (150)
T ss_pred ccCceeEEEeChhhhhhHHhHHHHHHHH----HHHHhcCcEEEEEecchhhhhHHHHcCccccchhheecC
Confidence 6789999999999999999999999999 999999999876655555556666899999887776653
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.8e-08 Score=106.12 Aligned_cols=120 Identities=13% Similarity=0.150 Sum_probs=88.6
Q ss_pred cccccccccCHHHHHHHHHHHHHccc-cccCCHHHHHhcc--CeEEEEEE-----CCeEEEEEEEeeeccCCceEEeeEE
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGA-LVRRTDEELLKAL--DSFYVVER-----EGQIIACAALFPFFKEKCGEVAAIG 520 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~-~~~~~~e~l~~~i--~~~~Va~~-----dg~IVG~~~l~~~~~~~~aeI~~L~ 520 (585)
++||+++++|++.+.+|.+...+... ...++.+++...+ ..++++.. ++.+||++.+.. .....+|..++
T Consensus 187 ~~Ir~a~~~Dl~ri~~L~~~tnqfn~~~~~~s~~~i~~~l~~~~~~~~~~~d~~gd~givG~~~~~~--~~~~~~I~~l~ 264 (320)
T TIGR01686 187 LNISKNDEQNVQRVEELLGRTNQFNATYTRLNQEDVAQHMQKEEIVTVSMSDRFGDSGIIGIFVFEK--KEGNLFIDDLC 264 (320)
T ss_pred EEEEECChhhhHHHHHHHHhHHhhhccCccCCHHHHHHHhcCCCEEEEEEEecCCCCceEEEEEEEe--cCCcEEEEEEE
Confidence 46999999999999999765433221 2356677776655 23443432 568999998763 34578999999
Q ss_pred EccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccce----eccccccc-ccCeeec
Q 007903 521 VSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFL----RGRTHSYY-RLKFNCS 574 (585)
Q Consensus 521 V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~----~~~a~~YY-rlGF~~~ 574 (585)
|+|++||+|+|++||++++ +.|++.|+....+.+. +..+..|| ++||+..
T Consensus 265 vs~r~~grGig~~Ll~~l~----~~a~~~G~~~i~l~v~~~~~N~~A~~fY~~~GF~~~ 319 (320)
T TIGR01686 265 MSCRALGRGVETRMLRWLF----EQALDLGNHNARLYYRRTERNMPFLSFYEQIGFEDE 319 (320)
T ss_pred EcHhHhcCcHHHHHHHHHH----HHHHHcCCCeEEEEEeeCCCchHHHHHHHHcCCccC
Confidence 9999999999999999999 9999999986544332 23445566 7999854
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase | Back alignment and domain information |
|---|
Probab=98.76 E-value=2.8e-08 Score=102.58 Aligned_cols=119 Identities=13% Similarity=0.181 Sum_probs=80.2
Q ss_pred ccccccCHHHHHHHHHHHHHccccccCCHHHHHhcc-------CeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccC
Q 007903 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL-------DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPE 524 (585)
Q Consensus 452 R~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i-------~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~Pe 524 (585)
.+.+++|++++.+|+..........+++.+.. ..+ ...+++..++++||++.+.+. .....++..++|+|+
T Consensus 4 ~~l~~~d~~~v~~L~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~-~~~~~~~~~l~V~p~ 81 (292)
T TIGR03448 4 AALDADLRRDVRELLAAATAVDGVAPVSEQVL-RGLREPGAGHTRHLVAVDSDPIVGYANLVPA-RGTDPAMAELVVHPA 81 (292)
T ss_pred ccCCHHHHHHHHHHHHHHHhcCCCCCCCHHHH-hhccccCCCCceEEEEEECCEEEEEEEEEcC-CCCcceEEEEEECHh
Confidence 35788999999999876555433345665443 222 246778889999999998743 234468999999999
Q ss_pred CcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccce--eccccccc-ccCeeecCccccc
Q 007903 525 CRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFL--RGRTHSYY-RLKFNCSSKSFHI 580 (585)
Q Consensus 525 yRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~--~~~a~~YY-rlGF~~~~~~~~~ 580 (585)
|||+|||++||++++ +.+. ....+... +..+..|| ++||+.....+.+
T Consensus 82 ~rg~GiG~~Ll~~~~----~~~~----~~~~~~~~~~n~~a~~fy~~~Gf~~~~~~~~~ 132 (292)
T TIGR03448 82 HRRRGIGRALIRALL----AKGG----GRLRVWAHGDLPAARALASRLGLVPTRELLQM 132 (292)
T ss_pred hcCCCHHHHHHHHHH----Hhcc----CceEEEEcCCCHHHHHHHHHCCCEEccEEEEE
Confidence 999999999999999 5443 11111111 12334445 7999877654443
|
Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species. |
| >COG0456 RimI Acetyltransferases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.75 E-value=4.5e-08 Score=92.78 Aligned_cols=124 Identities=19% Similarity=0.219 Sum_probs=86.6
Q ss_pred cccccccccccCHH--HHHHHHHHHHHcccc--ccCCHHHHHhcc----CeEEEEEE---CC----eEEEEEEEeeeccC
Q 007903 447 LYEGTRTAKVTDLS--GIKQIIQPLVESGAL--VRRTDEELLKAL----DSFYVVER---EG----QIIACAALFPFFKE 511 (585)
Q Consensus 447 ~~~~IR~at~~D~~--~I~~Li~~~~~~~~~--~~~~~e~l~~~i----~~~~Va~~---dg----~IVG~~~l~~~~~~ 511 (585)
....+|.++..|+. .+.++ ....+. .+|+...+...+ ..++++.. ++ +++||+........
T Consensus 10 ~~~~ir~~~~~d~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~G~~~~~~~~~~ 85 (177)
T COG0456 10 DKVTIREAINKDLLDVALAAL----EARTFDIRLPWSREYFEKDLTQAPELLLVAETGGLDGLLDGKVVGFLLVRVVDGR 85 (177)
T ss_pred cceehhhhhhcccchHHHHHH----hhhcCCCCCcchHHHHHHHHhhCcceeEEEEecccCCCcccceeEEEEEEEecCC
Confidence 44679999999999 66666 444444 567777776665 45566665 33 59999998632221
Q ss_pred ----CceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCC-cccCccce--eccccc-ccccCeeecCccc
Q 007903 512 ----KCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHI-STNGFPFL--RGRTHS-YYRLKFNCSSKSF 578 (585)
Q Consensus 512 ----~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi-~~~g~~~~--~~~a~~-YYrlGF~~~~~~~ 578 (585)
..++|..++|+|+|||+|||++|+++++ +.+++.++ ....+... +..+.. |.++||+......
T Consensus 86 ~~~~~~~~i~~iaV~p~~r~~Gig~~Ll~~~~----~~~~~~~~~~~~~L~V~~~N~~Ai~lY~~~GF~~~~~~~ 156 (177)
T COG0456 86 PSADHEGHIYNLAVDPEYRGRGIGRALLDEAL----ERLRERGLADKIVLEVRESNEAAIGLYRKLGFEVVKIRK 156 (177)
T ss_pred ccccCccEEEEEEEChHhhcCCHHHHHHHHHH----HHHHhcCCCceEEEEEecCChHHHHHHHHcCCEEEeeeh
Confidence 2789999999999999999999999999 88888776 44333222 123334 5579999764433
|
|
| >PHA01807 hypothetical protein | Back alignment and domain information |
|---|
Probab=98.73 E-value=6.3e-08 Score=91.23 Aligned_cols=99 Identities=19% Similarity=0.134 Sum_probs=68.4
Q ss_pred cccccCHHHHHHHHHHHHHcccc-ccCC-HH----HHHhcc----CeEEEEEECCeEEEEEEEeeeccCCceE---EeeE
Q 007903 453 TAKVTDLSGIKQIIQPLVESGAL-VRRT-DE----ELLKAL----DSFYVVEREGQIIACAALFPFFKEKCGE---VAAI 519 (585)
Q Consensus 453 ~at~~D~~~I~~Li~~~~~~~~~-~~~~-~e----~l~~~i----~~~~Va~~dg~IVG~~~l~~~~~~~~ae---I~~L 519 (585)
.++.+|+..+.+|......+.-. .+|. .+ .+...+ ...++++.|+++||++.+.+.......+ +..|
T Consensus 8 ~~~~~d~~~~~~l~l~~l~e~p~~~~w~s~ee~~~~~~~~~~~~~~~~lva~~dg~lvG~~~l~~~~~~~~~~i~~l~~l 87 (153)
T PHA01807 8 HAKAGTPSELQGLCWLAIQELEEFTLFRSKEEALERILDSTESNDRTELLVFRDGKLAGIAVLVFEDDPHVGPCLGVQWQ 87 (153)
T ss_pred hhhhCCHHHHHHHHHHHHHhCccCCCCCChHHHHHHHHHHhhCCCceEEEEEECCEEEEEEEEEcCCCcceeeeccceeE
Confidence 36778999998887655443221 1121 12 222211 3457788899999999987433332334 4457
Q ss_pred EEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccC
Q 007903 520 GVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNG 555 (585)
Q Consensus 520 ~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g 555 (585)
||+|+|||+|+|++||++++ ++|++.|+....
T Consensus 88 YV~pe~RG~GiG~~Ll~~~~----~~Ar~~G~~~l~ 119 (153)
T PHA01807 88 YVLPEYRNAGVAREFLRELI----RLAGEGNLPLIA 119 (153)
T ss_pred EECHHHcCCCHHHHHHHHHH----HHHHHCCCCEEE
Confidence 99999999999999999999 999999987653
|
|
| >PRK10562 putative acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=6.3e-08 Score=89.51 Aligned_cols=119 Identities=15% Similarity=0.125 Sum_probs=74.3
Q ss_pred ccccccccCHHHHHHHHHHHHHc--cccc--cC--CHHHHHhcc---CeEEEEEECCeEEEEEEEeeeccCCceEEeeEE
Q 007903 450 GTRTAKVTDLSGIKQIIQPLVES--GALV--RR--TDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIG 520 (585)
Q Consensus 450 ~IR~at~~D~~~I~~Li~~~~~~--~~~~--~~--~~e~l~~~i---~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~ 520 (585)
+||+++.+|++.+.+++...... .+.. .| ....+.... ..++++..++++||++.+.. ..++..++
T Consensus 1 ~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~iG~~~~~~-----~~~i~~~~ 75 (145)
T PRK10562 1 MIREYQPSDLPAILQLWLESTIWAHPFIKEQYWRESAPLVRDVYLPAAQTWVWEEDGKLLGFVSVLE-----GRFVGALF 75 (145)
T ss_pred CcccccchhhHHHHHHHHHhccccCCCCCHHHHHHhHHHhhhhhcCcccEEEEEECCEEEEEEEEee-----ccEEEEEE
Confidence 38999999999999996433211 1110 00 001111111 34667788899999998762 23688899
Q ss_pred EccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceecccc-cccccCeeecCccccc
Q 007903 521 VSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTH-SYYRLKFNCSSKSFHI 580 (585)
Q Consensus 521 V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~-~YYrlGF~~~~~~~~~ 580 (585)
|+|+|||+|+|++|+++++ +.+....+.. ...+..+. .|.|+||+..+..++-
T Consensus 76 v~~~~rg~G~g~~ll~~~~----~~~~~~~~~v---~~~N~~s~~~y~k~Gf~~~~~~~~~ 129 (145)
T PRK10562 76 VAPKAVRRGIGKALMQHVQ----QRYPHLSLEV---YQKNQRAVNFYHAQGFRIVDSAWQE 129 (145)
T ss_pred ECHHHcCCCHHHHHHHHHH----hhCCeEEEEE---EcCChHHHHHHHHCCCEEccccccC
Confidence 9999999999999999998 5332221111 01122333 4557999998765443
|
|
| >PRK13688 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.65 E-value=3.6e-08 Score=93.23 Aligned_cols=108 Identities=15% Similarity=0.167 Sum_probs=71.7
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHHhccCeEEEEEECCeEEEEEEEeee---------ccCCceEEeeE
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPF---------FKEKCGEVAAI 519 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i~~~~Va~~dg~IVG~~~l~~~---------~~~~~aeI~~L 519 (585)
.+||++..+|++++.++ ....+. . ..-..++++..++++||++.+... ..++.++|..+
T Consensus 18 ~~~~~~~~~dl~~l~~l----~~~~f~-~-------~~~~~~~~~~~~~~~VG~~~l~~~dg~~~~~~~~~~~~~~L~~l 85 (156)
T PRK13688 18 KKFREFGNQELSMLEEL----QANIIE-N-------DSESPFYGIYYGDSLVARMSLYKKGGVEEPYFEDTQDYLELWKL 85 (156)
T ss_pred HHHHHhcHHHHHHHHhh----hhhEee-c-------CCCCCEEEEEECCEEEEEEEEEecCCcccccccCCCCeEEEEEE
Confidence 46788999999999888 222221 0 111456778889999999887421 12356789999
Q ss_pred EEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceecccccccccCeeecCcc
Q 007903 520 GVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYYRLKFNCSSKS 577 (585)
Q Consensus 520 ~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YYrlGF~~~~~~ 577 (585)
+|+|+|||+|+|++||+++. +. ++... .........+|.++||++.+..
T Consensus 86 ~V~p~~rgkGiG~~Ll~~a~----~~----~~~~~-~~~~~~a~~FY~k~GF~~~~~~ 134 (156)
T PRK13688 86 EVLPKYQNRGYGEMLVDFAK----SF----QLPIK-TIARNKSKDFWLKLGFTPVEYK 134 (156)
T ss_pred EECHHHcCCCHHHHHHHHHH----Hh----CCeEE-EEeccchHHHHHhCCCEEeEEe
Confidence 99999999999999998776 32 33211 1111223334447999987543
|
|
| >PF13523 Acetyltransf_8: Acetyltransferase (GNAT) domain; PDB: 2VQY_A 2BUE_A 1V0C_A 1YK3_D 2PR8_A 2QIR_A 2PRB_A 2QML_A 2PC1_A | Back alignment and domain information |
|---|
Probab=98.63 E-value=8.3e-08 Score=89.26 Aligned_cols=122 Identities=22% Similarity=0.160 Sum_probs=78.9
Q ss_pred ccccc-ccCHHHHHHHHHHHHHccc-cccCC---HHHHHhcc-----CeEEEEEECCeEEEEEEEeeec-----cCCceE
Q 007903 451 TRTAK-VTDLSGIKQIIQPLVESGA-LVRRT---DEELLKAL-----DSFYVVEREGQIIACAALFPFF-----KEKCGE 515 (585)
Q Consensus 451 IR~at-~~D~~~I~~Li~~~~~~~~-~~~~~---~e~l~~~i-----~~~~Va~~dg~IVG~~~l~~~~-----~~~~ae 515 (585)
+|+++ .+|++.|.++++......+ ...++ .+.+.+.+ ...+|+..||+++||+.+.... .+....
T Consensus 1 ~R~a~~~~Dl~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~dg~~~g~~~~~~~~~~~~~~~~~~~ 80 (152)
T PF13523_consen 1 LRPATTPDDLPLILQWLNQPHVREFWDQDPSQEWVEEYPEQLEADPGHHPYVAEDDGEPIGYFEIYWPDEDYDADDGDRG 80 (152)
T ss_dssp EEE---GGGHHHHHHHHTSHHHHCCH-CCCTHHHHHHHHHHHCHTTTEEEEEEEETTEEEEEEEEEEGGGSS---TTEEE
T ss_pred CeeCccHHHHHHHHHHHHhHHHHHHccCCCCHHHHHHHHhhhcccCCceEEEEEECCEEEEEEEEecccccccCCCCEEE
Confidence 69999 9999999999876543333 22222 22233332 3678999999999999886311 345667
Q ss_pred EeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHc-CCcccCcc---ceecccccccccCeeecCc
Q 007903 516 VAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYD-HISTNGFP---FLRGRTHSYYRLKFNCSSK 576 (585)
Q Consensus 516 I~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~-gi~~~g~~---~~~~~a~~YYrlGF~~~~~ 576 (585)
++.++|+|+|||+|+|+.+++.++ +.+.+. ++...... ......+.|.+.||...+.
T Consensus 81 ~~~~~~~~~~rg~G~g~~~~~~~~----~~~~~~~~~~~i~~~~~~~N~~~~~~~~k~GF~~~g~ 141 (152)
T PF13523_consen 81 IHRLIVDPEYRGQGLGKAMLRALI----EFLFEDPGVDRIVLDPHEDNTRAIRLYEKAGFRKVGE 141 (152)
T ss_dssp EEEEESTGGGTTSSHHHHHHHHHH----HHHHTSTT--EEEEEEBTT-HHHHHHHHHTT-EEEEE
T ss_pred EeeeeechhhcCCCHHHHHHHHHH----HHHHhCCCCCEEEEecCcCCHHHHHHHHHcCCEEeeE
Confidence 888999999999999999999999 666654 44442211 1112334577899998754
|
|
| >cd02169 Citrate_lyase_ligase Citrate lyase ligase | Back alignment and domain information |
|---|
Probab=98.62 E-value=6.4e-08 Score=100.62 Aligned_cols=77 Identities=16% Similarity=0.207 Sum_probs=61.0
Q ss_pred eEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceecccccccc
Q 007903 489 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYYR 568 (585)
Q Consensus 489 ~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YYr 568 (585)
.+++.++++++||++.+.. .+|..++|+|+|||+|+|++||++++ +++++.|+...-+........+|++
T Consensus 7 ~~~v~~~~~~iVG~~~l~~------~~I~~vaV~p~~Rg~GiG~~Ll~~l~----~~a~~~g~~~i~L~t~~~~~~fYek 76 (297)
T cd02169 7 TVGIFDDAGELIATGSIAG------NVLKCVAVCPKYQGEGLALKIVSELI----NKAYEEGIFHLFLFTKPKNAKFFRG 76 (297)
T ss_pred EEEEEEECCEEEEEEEecc------CEEEEEEECHHHcCCCHHHHHHHHHH----HHHHHCCCCEEEEEEcccHHHHHHH
Confidence 4667778899999998862 36899999999999999999999999 9999999886433322223345558
Q ss_pred cCeeecC
Q 007903 569 LKFNCSS 575 (585)
Q Consensus 569 lGF~~~~ 575 (585)
+||+..+
T Consensus 77 ~GF~~~~ 83 (297)
T cd02169 77 LGFKELA 83 (297)
T ss_pred CCCEEec
Confidence 9999776
|
Citrate lyase ligase, also known as [Citrate (pro-3S)-lyase] ligase, is responsible for acetylation of the (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) prosthetic group of the gamma subunit of citrate lyase, converting the inactive thiol form of this enzyme to the active form. The acetylation of 1 molecule of deacetyl-citrate lyase to enzymatically active citrate lyase requires 6 molecules of ATP. The Adenylylyltranferase activity of the enzyme involves the formation of AMP and and pyrophosphate in the acetylation reaction. |
| >KOG3139 consensus N-acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.57 E-value=3.8e-07 Score=84.89 Aligned_cols=87 Identities=21% Similarity=0.203 Sum_probs=63.4
Q ss_pred EEEEEECCe-EEEEEEEeeecc--CCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccc--eecccc
Q 007903 490 FYVVEREGQ-IIACAALFPFFK--EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPF--LRGRTH 564 (585)
Q Consensus 490 ~~Va~~dg~-IVG~~~l~~~~~--~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~--~~~~a~ 564 (585)
++++.+++. .||++.+..... ...++|..++|+++|||+|||++|.+.++ +.++..|+.+..+.. .+..+.
T Consensus 58 ~~~a~d~~~~~VGai~ck~~~~r~~~rgyi~mLaV~~e~Rg~GIg~aLvr~aI----d~m~~~g~~eVvLeTe~~n~~A~ 133 (165)
T KOG3139|consen 58 CFLALDEKGDTVGAIVCKLDTHRNTLRGYIAMLAVDSEYRGQGIGKALVRKAI----DAMRSRGYSEVVLETEVTNLSAL 133 (165)
T ss_pred EEEEEcCCCceEEEEEEeccccCCcceEEEEEEEechhhccccHHHHHHHHHH----HHHHHCCCcEEEEeccccchHHH
Confidence 344444333 599988863221 24699999999999999999999999999 999999999864332 233444
Q ss_pred c-ccccCeeecCccccc
Q 007903 565 S-YYRLKFNCSSKSFHI 580 (585)
Q Consensus 565 ~-YYrlGF~~~~~~~~~ 580 (585)
. |.++||......|+=
T Consensus 134 ~LY~sLGF~r~~r~~~Y 150 (165)
T KOG3139|consen 134 RLYESLGFKRDKRLFRY 150 (165)
T ss_pred HHHHhcCceEecceeEE
Confidence 4 557999987766653
|
|
| >TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase | Back alignment and domain information |
|---|
Probab=98.48 E-value=1e-06 Score=91.02 Aligned_cols=124 Identities=15% Similarity=0.151 Sum_probs=80.8
Q ss_pred cccccccc-cCHHHHHHHHHHHHHccc-cccCCHHHHHhcc-------CeEEEEEE--CCeEEEEEEEeeec-cCCceEE
Q 007903 449 EGTRTAKV-TDLSGIKQIIQPLVESGA-LVRRTDEELLKAL-------DSFYVVER--EGQIIACAALFPFF-KEKCGEV 516 (585)
Q Consensus 449 ~~IR~at~-~D~~~I~~Li~~~~~~~~-~~~~~~e~l~~~i-------~~~~Va~~--dg~IVG~~~l~~~~-~~~~aeI 516 (585)
.++|+++. .|.+.+.++.+....... ...|+.+.+.... ..++++.. ++++|||+.+.... ....++|
T Consensus 150 ~~~r~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~vG~~~~~~~~~~~~~~~i 229 (292)
T TIGR03448 150 VTVRAYVGAPDDAEWLRVNNAAFAWHPEQGGWTRADLAERRAEPWFDPAGLFLAFDDAPGELLGFHWTKVHPDEPALGEV 229 (292)
T ss_pred eEeeccCCCcchHHHHHHHHHHhhCCCccCCcCHHHHHHHhhCcCCCcCceEEEEECCCCcEEEEEEEEecCCCCceeEE
Confidence 46788754 588888777544332221 1245555544321 33566666 68999997655322 2235678
Q ss_pred eeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee--cccc-cccccCeeecCc
Q 007903 517 AAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR--GRTH-SYYRLKFNCSSK 576 (585)
Q Consensus 517 ~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~--~~a~-~YYrlGF~~~~~ 576 (585)
..++|+|+|||+|+|++|+++++ +++++.++....+.... ..+. .|.++||+..+.
T Consensus 230 ~~~~V~p~~rg~GiG~~ll~~~~----~~~~~~g~~~v~l~v~~~N~~a~~~y~k~GF~~~~~ 288 (292)
T TIGR03448 230 YVVGVDPAAQGRGLGDALTLIGL----HHLAARGLPAVMLYVEADNEAAVRTYEKLGFTVAEV 288 (292)
T ss_pred EEEEECHHHcCCCHHHHHHHHHH----HHHHHCCCCEEEEEEeCCCHHHHHHHHHcCCEEccc
Confidence 88899999999999999999999 88888887764433222 2333 455799997654
|
Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species. |
| >TIGR00124 cit_ly_ligase [citrate (pro-3S)-lyase] ligase | Back alignment and domain information |
|---|
Probab=98.45 E-value=6.9e-07 Score=94.35 Aligned_cols=82 Identities=13% Similarity=0.105 Sum_probs=64.4
Q ss_pred hccCeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceecccc
Q 007903 485 KALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTH 564 (585)
Q Consensus 485 ~~i~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~ 564 (585)
...+.++++++++++|||+.+.. ..|.+++|+|+|||+|+|++||++++ +.++++|+...-.........
T Consensus 28 ~~~d~~vv~~~~~~lVg~g~l~g------~~ik~vaV~~~~rG~Glg~~L~~~L~----~~a~~~G~~~l~l~Tk~~~~~ 97 (332)
T TIGR00124 28 APLEIFIAVYEDEEIIGCGGIAG------NVIKCVAIDESLRGEGLALQLMTELE----NLAYELGRFHLFIFTKPEYAA 97 (332)
T ss_pred CCCCEEEEEEECCEEEEEEEEec------CEEEEEEEcHHHcCCCHHHHHHHHHH----HHHHHcCCCEEEEEECchHHH
Confidence 34467888889999999999862 24889999999999999999999999 999999987653332222344
Q ss_pred cccccCeeecCc
Q 007903 565 SYYRLKFNCSSK 576 (585)
Q Consensus 565 ~YYrlGF~~~~~ 576 (585)
.|.++||.....
T Consensus 98 fy~klGF~~i~~ 109 (332)
T TIGR00124 98 LFEYCGFKTLAE 109 (332)
T ss_pred HHHHcCCEEeee
Confidence 566899998753
|
ATP is cleaved to AMP and pyrophosphate during the reaction. The carboxyl end is homologous to a number of cytidyltransferases that also release pyrophosphate. |
| >PRK15130 spermidine N1-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.41 E-value=3.6e-07 Score=87.97 Aligned_cols=123 Identities=19% Similarity=0.181 Sum_probs=79.5
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccC---CHHH----HHhcc----CeEEEEEECCeEEEEEEEeeec-cCCceEE
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRR---TDEE----LLKAL----DSFYVVEREGQIIACAALFPFF-KEKCGEV 516 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~---~~e~----l~~~i----~~~~Va~~dg~IVG~~~l~~~~-~~~~aeI 516 (585)
..+|+++++|++.+.++........+...+ .... +...+ ...|++..+|++||++.+.... ....+++
T Consensus 7 l~lR~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~iG~~~~~~~~~~~~~~~~ 86 (186)
T PRK15130 7 VKLRPLEREDLRFVHQLDNNASVMRYWFEEPYEAFVELSDLYDKHIHDQSERRFVVECDGEKAGLVELVEINHVHRRAEF 86 (186)
T ss_pred eEEecCCHHHHHHHHHHhcChHHHhhcCCcccccHHHHHHHHHHhhhcccCcEEEEEECCEEEEEEEEEeecCCCCeEEE
Confidence 569999999999999986543211111111 1111 11111 3467778899999999886432 2345666
Q ss_pred eeEEEccCCcCCcHHHHHHHHHHhhhHHHHH-HcCCcccCccce--eccc-ccccccCeeecCc
Q 007903 517 AAIGVSPECRGQGQGDKLLGLCIWPLLSETR-YDHISTNGFPFL--RGRT-HSYYRLKFNCSSK 576 (585)
Q Consensus 517 ~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~-~~gi~~~g~~~~--~~~a-~~YYrlGF~~~~~ 576 (585)
.++|+|+|||+|+|+++++.++ +++. ..++........ +.++ ..|+++||+..+.
T Consensus 87 -~~~v~~~~~g~G~g~~l~~~l~----~~~~~~~~~~rv~~~v~~~N~~s~~~yek~GF~~~~~ 145 (186)
T PRK15130 87 -QIIISPEYQGKGLATRAAKLAM----DYGFTVLNLYKLYLIVDKENEKAIHIYRKLGFEVEGE 145 (186)
T ss_pred -EEEECHHHcCCCHHHHHHHHHH----HHHhhcCCceEEEEEEccCCHHHHHHHHHCCCEEEEE
Confidence 5999999999999999999999 7665 457765432221 2233 3455899987644
|
|
| >TIGR03585 PseH pseudaminic acid biosynthesis N-acetyl transferase | Back alignment and domain information |
|---|
Probab=98.38 E-value=1.6e-06 Score=80.43 Aligned_cols=120 Identities=16% Similarity=0.132 Sum_probs=79.7
Q ss_pred ccccccccCHHHHHHHHHHHHHcccc---ccCCHHHHHh---cc-----CeEEEEEECCeEEEEEEEeeecc-CCceEEe
Q 007903 450 GTRTAKVTDLSGIKQIIQPLVESGAL---VRRTDEELLK---AL-----DSFYVVEREGQIIACAALFPFFK-EKCGEVA 517 (585)
Q Consensus 450 ~IR~at~~D~~~I~~Li~~~~~~~~~---~~~~~e~l~~---~i-----~~~~Va~~dg~IVG~~~l~~~~~-~~~aeI~ 517 (585)
.+|+++++|++.+.++........++ ...+.+.... .. ..++++..+|++||++.+..... ...+++.
T Consensus 2 ~lr~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vG~~~~~~~~~~~~~~~~g 81 (156)
T TIGR03585 2 NFTPLNSEELELVLEWRNHPDVRANMYSDHLIDWEEHLHFIEALKQDPNRRYWIVCQESRPIGVISFTDINLVHKSAFWG 81 (156)
T ss_pred CcccCCHHHHHHHHHhhCCHHHHhhccCcCCCCHHHHHHHHHHhhcCCCceEEEEEECCEEEEEEEEEecChhhCeEEEE
Confidence 58999999999999987543322221 1123222211 11 35778888999999999974332 3455664
Q ss_pred eEEEccCCcCCcHHHHHHHHHHhhhHHHHHH-cCCcccCccce--e-cccccccccCeeecC
Q 007903 518 AIGVSPECRGQGQGDKLLGLCIWPLLSETRY-DHISTNGFPFL--R-GRTHSYYRLKFNCSS 575 (585)
Q Consensus 518 ~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~-~gi~~~g~~~~--~-~~a~~YYrlGF~~~~ 575 (585)
+++.|++| +|+|+++++.++ +++.+ .++........ + ...+.|+++||...+
T Consensus 82 -~~~~~~~~-~G~g~~~~~~~~----~~a~~~~~~~~i~~~v~~~N~~s~~~y~k~Gf~~~g 137 (156)
T TIGR03585 82 -IYANPFCK-PGVGSVLEEAAL----EYAFEHLGLHKLSLEVLEFNNKALKLYEKFGFEREG 137 (156)
T ss_pred -EEeChhhh-cCchHHHHHHHH----HHHHhhCCeeEEEEEEeccCHHHHHHHHHcCCeEee
Confidence 66999999 999999999999 77764 57766432211 2 233456689999875
|
Sequences in this family are members of the pfam00583 (GNAT) superfamily of acetyltransferases and are proposed to perform a N-acetylation step in the process of pseudaminic acid biosynthesis in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci. Significantly, many genomes containing other components of this pathway lack this gene, indicating that some other N-acetyl transferases may be incolved and/or the step is optional, resulting in a non-acetylated pseudaminic acid variant sugar. |
| >PRK09181 aspartate kinase; Validated | Back alignment and domain information |
|---|
Probab=98.30 E-value=2.3e-05 Score=86.67 Aligned_cols=79 Identities=18% Similarity=0.111 Sum_probs=66.0
Q ss_pred HHHHHHHHc----CCCeEEEcCCccCCCCceeee---ChHHHHHHHHHHcCCCEEEEeeccccc---C------CCCccc
Q 007903 241 VTRMRERLD----GGCLVILSNLGYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPIL---D------ESGHLI 304 (585)
Q Consensus 241 ~~~I~~lL~----~G~IPVi~~v~~~~~G~~~ni---d~D~lAa~lA~~L~AdkLIilTDV~gl---~------~~~~lI 304 (585)
.+.|++.++ .+.|||+++.+.+.+|++..+ .+|..|+.||.+|+||.+.+.|||+ + | +++++|
T Consensus 182 ~~~i~~~l~~~~~~~~v~Vv~GF~~~~~G~itTLGRGGSDyTAailAa~L~A~~~~IwTDV~-I~taDPriV~~~~A~~i 260 (475)
T PRK09181 182 DERIKKAFKDIDVTKELPIVTGYAKCKEGLMRTFDRGYSEMTFSRIAVLTGADEAIIHKEYH-LSSADPKLVGEDKVVPI 260 (475)
T ss_pred HHHHHHHHhhhccCCcEEEecCCcCCCCCCEEecCCChHHHHHHHHHHHcCCCEEEEeCCCc-cccCCCCcCCCCCCeEc
Confidence 456666655 588999999865667888766 7899999999999999999999997 5 3 468899
Q ss_pred ccccHHHHHHHHHhhc
Q 007903 305 RFLTLQEADSLIRQRV 320 (585)
Q Consensus 305 ~~it~~e~~~li~~~~ 320 (585)
++|+.+|+.+|..-|+
T Consensus 261 ~~lsy~Ea~ELA~~GA 276 (475)
T PRK09181 261 GRTNYDVADQLANLGM 276 (475)
T ss_pred CccCHHHHHHHHHcCc
Confidence 9999999999987666
|
|
| >PRK10151 ribosomal-protein-L7/L12-serine acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.26 E-value=5.6e-06 Score=79.13 Aligned_cols=123 Identities=11% Similarity=0.095 Sum_probs=80.2
Q ss_pred cccccccccCHHHHHHHHHHHH--Hccc---c-ccCCHHHHHhcc-----------CeEEEEEECCeEEEEEEEeeec-c
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLV--ESGA---L-VRRTDEELLKAL-----------DSFYVVEREGQIIACAALFPFF-K 510 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~--~~~~---~-~~~~~e~l~~~i-----------~~~~Va~~dg~IVG~~~l~~~~-~ 510 (585)
..+|+.+++|++.+.+++.... .... . .+.+.++..+.+ ..++++..++++||++.+.... .
T Consensus 11 l~Lr~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~iG~~~l~~~~~~ 90 (179)
T PRK10151 11 LELHAVDESHVTPLHQLVCKNKTWLQQSLNWPQFVQSEEDTRKTVQGNVMLHQRGYAKMFMIFKEDELIGVLSFNRIEPL 90 (179)
T ss_pred EEEEeCCHHHHHHHHHHHHHhHHHHHhcCCCcCccCCHHHHHHHHHHHHHHHhcCCcEEEEEEECCEEEEEEEEEeeccC
Confidence 5799999999999999974211 1111 1 112333333222 1357777799999999886432 2
Q ss_pred CCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHH-cCCcccCccc---eecccccccccCeeecCc
Q 007903 511 EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRY-DHISTNGFPF---LRGRTHSYYRLKFNCSSK 576 (585)
Q Consensus 511 ~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~-~gi~~~g~~~---~~~~a~~YYrlGF~~~~~ 576 (585)
...++|. ++++|+|||+|+|++++..++ +++.+ .++.+..... .......|.|+||+..+.
T Consensus 91 ~~~~~ig-~~i~~~~~g~G~~tea~~~l~----~~~~~~~~~~ri~~~v~~~N~~S~~v~ek~Gf~~~g~ 155 (179)
T PRK10151 91 NKTAYIG-YWLDESHQGQGIISQALQALI----HHYAQSGELRRFVIKCRVDNPASNQVALRNGFTLEGC 155 (179)
T ss_pred CCceEEE-EEEChhhcCCcHHHHHHHHHH----HHHHhhCCccEEEEEEcCCCHHHHHHHHHCCCEEEeE
Confidence 3567874 689999999999999999999 76654 4666532211 122334566899997644
|
|
| >cd04248 AAK_AK-Ectoine AAK_AK-Ectoine: Amino Acid Kinase Superfamily (AAK), AK-Ectoine; this CD includes the N-terminal catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and other various halotolerant or halophilic bacteria | Back alignment and domain information |
|---|
Probab=98.21 E-value=5.1e-05 Score=78.70 Aligned_cols=78 Identities=18% Similarity=0.135 Sum_probs=63.6
Q ss_pred HHHHHHHc----CCCeEEEcCCccCCCCceeee---ChHHHHHHHHHHcCCCEEEEeeccccc---C------CCCcccc
Q 007903 242 TRMRERLD----GGCLVILSNLGYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPIL---D------ESGHLIR 305 (585)
Q Consensus 242 ~~I~~lL~----~G~IPVi~~v~~~~~G~~~ni---d~D~lAa~lA~~L~AdkLIilTDV~gl---~------~~~~lI~ 305 (585)
+.|.+.++ .+.|||+++.+.+.+|++..+ -+|..|+.||.+|+|+.+.+.|||+ + | +++++|+
T Consensus 177 ~~i~~~~~~~~~~~~v~IvtGF~~~~~G~itTLGRGGSDyTAs~iAa~l~A~ev~I~TDV~-i~taDPriV~~~~A~~i~ 255 (304)
T cd04248 177 ERISEAFRDIDPRDELPIVTGYAKCAEGLMREFDRGYSEMTFSRIAVLTGASEAIIHKEFH-LSSADPKLVGEDKARPIG 255 (304)
T ss_pred HHHHHHHHhhccCCcEEEeCCccCCCCCCEEEcCCCcHHHHHHHHHHHcCCCEEEEECCCc-eecCCCCccCCCCceEeC
Confidence 44444444 578999999876678887765 7899999999999999999999996 5 3 3578999
Q ss_pred cccHHHHHHHHHhhc
Q 007903 306 FLTLQEADSLIRQRV 320 (585)
Q Consensus 306 ~it~~e~~~li~~~~ 320 (585)
+++.+|+.+|..-|+
T Consensus 256 ~lsY~EA~ELA~~Ga 270 (304)
T cd04248 256 RTNYDVADQLANLGM 270 (304)
T ss_pred ccCHHHHHHHHHcCh
Confidence 999999999976555
|
Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinase and L-aspartate-semialdehyde dehydrogenase. The M. alcaliphilum and the V. cholerae aspartokinases are encoded on the ectABCask operon. |
| >PF13302 Acetyltransf_3: Acetyltransferase (GNAT) domain; PDB: 3TTH_C 3JUW_A 2ZXV_A 2Z0Z_A 2VI7_B 3EG7_F 1YRE_C 3IGR_B 3FBU_A 2FCK_A | Back alignment and domain information |
|---|
Probab=98.20 E-value=6.5e-06 Score=74.75 Aligned_cols=118 Identities=18% Similarity=0.208 Sum_probs=75.8
Q ss_pred ccccccccCHHHHHHHHHHHHHccc---ccc-CCHHHHHhcc--------C---eEEEEEE-C-CeEEEEEEEeee-ccC
Q 007903 450 GTRTAKVTDLSGIKQIIQPLVESGA---LVR-RTDEELLKAL--------D---SFYVVER-E-GQIIACAALFPF-FKE 511 (585)
Q Consensus 450 ~IR~at~~D~~~I~~Li~~~~~~~~---~~~-~~~e~l~~~i--------~---~~~Va~~-d-g~IVG~~~l~~~-~~~ 511 (585)
.||+++++|++.+.++........+ ..+ .+.+...+.+ . .+|++.. + +++||++.+... ...
T Consensus 3 ~lr~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~iG~i~~~~~~~~~ 82 (142)
T PF13302_consen 3 TLRPLTPEDADAIYEWRSDPEIRRYLPWGPPWPTLEEAEEWIQSRQDSWENHGYYYFAIEDKDDGEIIGFIGLYNIDKNN 82 (142)
T ss_dssp EEEE-HGGGHHHHHHHHTTTTHCTTSSTTTSSSSHHHHHHHHHHHHHCHHEETEEEEEEEETTTTEEEEEEEEEEEETTT
T ss_pred EEEcCCHHHHHHHHHHhcCHHHHHhcCCCCCCCCHHHHHHHHHHhhhhhhcccceEEEEEeccCCceEEEeeeeecccCC
Confidence 5899999999999999742221111 111 2433322211 1 2344444 3 479999999422 246
Q ss_pred CceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHH-HHcCCcccCccce---ecccccccccCee
Q 007903 512 KCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSET-RYDHISTNGFPFL---RGRTHSYYRLKFN 572 (585)
Q Consensus 512 ~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A-~~~gi~~~g~~~~---~~~a~~YYrlGF~ 572 (585)
..+++. +.|.|+|||+|+|+.++..++ +++ +..++........ ....+.+.+.||+
T Consensus 83 ~~~eig-~~i~~~~~g~G~~~~~~~~~~----~~~~~~~~~~~i~a~~~~~N~~s~~~~~k~GF~ 142 (142)
T PF13302_consen 83 NWAEIG-YWIGPDYRGKGYGTEALKLLL----DWAFEELGLHRIIATVMADNEASRRLLEKLGFE 142 (142)
T ss_dssp TEEEEE-EEEEGGGTTSSHHHHHHHHHH----HHHHHTSTSSEEEEEEETT-HHHHHHHHHTT-E
T ss_pred Cccccc-cchhHHHHhhhHHHHHHHHHH----HHHHhcCCcEEEEEEECcCCHHHHHHHHHcCCC
Confidence 788886 899999999999999999999 887 5778876433222 2344457789985
|
... |
| >cd04301 NAT_SF N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate | Back alignment and domain information |
|---|
Probab=98.15 E-value=9.4e-06 Score=61.70 Aligned_cols=59 Identities=31% Similarity=0.423 Sum_probs=48.7
Q ss_pred EEEEECCeEEEEEEEeeecc-CCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcc
Q 007903 491 YVVEREGQIIACAALFPFFK-EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHIST 553 (585)
Q Consensus 491 ~Va~~dg~IVG~~~l~~~~~-~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~ 553 (585)
+++..+++++|++.+.+... ++..++..++|+|+|||+|+|++|++.++ +++.+.++..
T Consensus 2 ~~~~~~~~~ig~~~~~~~~~~~~~~~l~~~~v~~~~~~~g~~~~~~~~~~----~~~~~~~~~~ 61 (65)
T cd04301 2 LVAEDDGEIVGFASLSPDGSGGDTAYIGDLAVLPEYRGKGIGSALLEAAE----EEARERGAKR 61 (65)
T ss_pred EEEecCCEEEEEEEEEecCCCCccEEEEEEEECHHHcCcCHHHHHHHHHH----HHHHHcCCcE
Confidence 45667899999999885321 46889999999999999999999999999 7777766543
|
NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, ranging from bacterial antibiotic resistance to circadian rhythms in mammals. Members include GCN5-related N-Acetyltransferases (GNAT) such as Aminoglycoside N-acetyltransferases, Histone N-acetyltransferase (HAT) enzymes, and Serotonin N-acetyltransferase, which catalyze the transfer of an acetyl group to a substrate. The kinetic mechanism of most GNATs involves the ordered formation of a ternary complex: the reaction begins with Acetyl Coenzyme A (AcCoA) binding, followed by binding of substrate, then direct transfer of the acetyl group from AcCoA to the substrate, followed by product and subsequent CoA release. Other family members include Arginine/ornithine N-succinyltransfera |
| >COG2153 ElaA Predicted acyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.11 E-value=5e-06 Score=76.13 Aligned_cols=88 Identities=19% Similarity=0.343 Sum_probs=63.7
Q ss_pred ccCeEEEEEECCeEEEEEEEeeecc-CCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceeccc-
Q 007903 486 ALDSFYVVEREGQIIACAALFPFFK-EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRT- 563 (585)
Q Consensus 486 ~i~~~~Va~~dg~IVG~~~l~~~~~-~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a- 563 (585)
...++++...||++++|+.+.+... .....|.++.|+|++||+|+|++||+.++ +.+.+.+-.+. + .+...+
T Consensus 48 ~~~Hl~~~~~~g~LvAyaRLl~~~~~~~~~~iGRV~v~~~~RG~glG~~Lm~~AL----~~~~~~~p~~~-v-~l~AQah 121 (155)
T COG2153 48 DTRHLLGWTPDGELVAYARLLPPGAEYEEVSIGRVIVSPAARGQGLGQQLMEKAL----ETAGREWPDKP-V-YLGAQAH 121 (155)
T ss_pred ccceEEEEcCCCeEEEEEecCCCCCCcCceeeeeEEECHhhhccchhHHHHHHHH----HHHHhhCCCCC-e-EEehHHH
Confidence 3366777777999999999985321 12356999999999999999999999999 77777664321 1 122333
Q ss_pred -cccc-ccCeeecCcccc
Q 007903 564 -HSYY-RLKFNCSSKSFH 579 (585)
Q Consensus 564 -~~YY-rlGF~~~~~~~~ 579 (585)
..|| ++||...+..|.
T Consensus 122 Lq~fYa~~GFv~~~e~yl 139 (155)
T COG2153 122 LQDFYASFGFVRVGEEYL 139 (155)
T ss_pred HHHHHHHhCcEEcCchhh
Confidence 3466 699998877654
|
|
| >PRK10809 ribosomal-protein-S5-alanine N-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.04 E-value=2.3e-05 Score=75.93 Aligned_cols=122 Identities=13% Similarity=0.062 Sum_probs=77.0
Q ss_pred cccccccccCHHHHHHHHHHHHH--ccccccC-----CHHH-------HHhcc----CeEEEEE--ECCeEEEEEEEeee
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVE--SGALVRR-----TDEE-------LLKAL----DSFYVVE--REGQIIACAALFPF 508 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~--~~~~~~~-----~~e~-------l~~~i----~~~~Va~--~dg~IVG~~~l~~~ 508 (585)
..||+++++|++.+.+++..... ..+.... ..+. +.... ...|++. .++++||++.+...
T Consensus 18 l~LR~~~~~Da~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~iG~i~l~~~ 97 (194)
T PRK10809 18 LVVRLVHERDAWRLADYYAENRHFLKPWEPVRDESHCYPSGWQARLGMINEFHKQGSAFYFALLDPDEKEIIGVANFSNV 97 (194)
T ss_pred EEEEeCCHHHHHHHHHHHHhCHHhccCCCCCCcccccCHHHHHHHHHHHHHHHhcCcEEEEEEEECCCCeEEEEEEEEee
Confidence 57999999999999999764211 1111000 0111 11111 2234443 36799999998743
Q ss_pred ccC--CceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHH-cCCcccCccc---eecccccccccCeeecC
Q 007903 509 FKE--KCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRY-DHISTNGFPF---LRGRTHSYYRLKFNCSS 575 (585)
Q Consensus 509 ~~~--~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~-~gi~~~g~~~---~~~~a~~YYrlGF~~~~ 575 (585)
... ..++| .+.|.|+|||+|+|+++++.++ +++.+ +++....... .....+.|.|+||+..+
T Consensus 98 ~~~~~~~~ei-g~~i~~~~~G~G~~~ea~~~ll----~~~~~~l~l~~i~~~v~~~N~~S~~l~ek~Gf~~~g 165 (194)
T PRK10809 98 VRGSFHACYL-GYSLGQKWQGQGLMFEALQAAI----RYMQRQQHMHRIMANYMPHNKRSGDLLARLGFEKEG 165 (194)
T ss_pred cCCCeeeEEE-EEEECHHHcCCCHHHHHHHHHH----HHHHhcCCceEEEEEeeCCCHHHHHHHHHCCCcEEe
Confidence 221 23455 4789999999999999999999 88765 5887643222 22344457789998654
|
|
| >KOG3235 consensus Subunit of the major N alpha-acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.01 E-value=8.7e-06 Score=75.43 Aligned_cols=89 Identities=18% Similarity=0.137 Sum_probs=60.0
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHHhcc----CeEEEEE-ECCeEEEEEEEeeec----cCCceEEeeE
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVE-REGQIIACAALFPFF----KEKCGEVAAI 519 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i----~~~~Va~-~dg~IVG~~~l~~~~----~~~~aeI~~L 519 (585)
+.||.++++|+-.+.... -...........+.... ..-||++ .+|+||||+...... ++..++|.++
T Consensus 2 m~iR~ar~~DL~~mQ~~N----l~~lpENyqmkyylyh~lswp~lSyVA~D~~gkiVGYvlAkmee~p~~~~~hGhItSl 77 (193)
T KOG3235|consen 2 MNIRRARPDDLLEMQHCN----LLNLPENYQMKYYLYHGLSWPQLSYVAEDENGKIVGYVLAKMEEDPDDEPPHGHITSL 77 (193)
T ss_pred cccccCCHHHHHHhhhcc----cccCcHHHhHHHHHHhhcccccceEEEEcCCCcEEEEeeeehhhcccCCCCCCeeEEe
Confidence 468999999987776541 00000000011111111 4567887 679999999876433 3457899999
Q ss_pred EEccCCcCCcHHHHHHHHHHhh
Q 007903 520 GVSPECRGQGQGDKLLGLCIWP 541 (585)
Q Consensus 520 ~V~PeyRGkGIGk~LL~~~~~~ 541 (585)
+|...||+.|+|++||+.+.+.
T Consensus 78 aV~rs~RrlGla~kLm~qa~rA 99 (193)
T KOG3235|consen 78 AVKRSYRRLGLAQKLMNQASRA 99 (193)
T ss_pred eehhhHHHhhHHHHHHHHHHHH
Confidence 9999999999999999998743
|
|
| >COG3393 Predicted acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.91 E-value=1.3e-05 Score=80.60 Aligned_cols=79 Identities=19% Similarity=0.206 Sum_probs=60.7
Q ss_pred EEECCeEEEEEEEeeeccCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee--cccccccccC
Q 007903 493 VEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR--GRTHSYYRLK 570 (585)
Q Consensus 493 a~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~--~~a~~YYrlG 570 (585)
.+.||+||..+... ...+.++.|..+|++|+|||+|+|..|+..+. +.....|....-|...+ .+.+.|.++|
T Consensus 182 ~~~d~~iVa~A~t~-a~~~~~~~I~gV~T~peyR~kGyAt~lva~L~----~~lL~eGk~~~L~~~~~N~~A~~iY~riG 256 (268)
T COG3393 182 LEGDGKIVAKAETA-AENPAYAQINGVYTHPEYRGKGYATALVATLA----AKLLAEGKIPCLFVNSDNPVARRIYQRIG 256 (268)
T ss_pred EccCCcEEEeeecc-ccCCcceEEEEEEcCHHHccccHHHHHHHHHH----HHHHhCCCeeEEEEecCCHHHHHHHHHhC
Confidence 34556999999887 34578999999999999999999999999999 65556666654443222 3455688999
Q ss_pred eeecCc
Q 007903 571 FNCSSK 576 (585)
Q Consensus 571 F~~~~~ 576 (585)
|+..+.
T Consensus 257 F~~~g~ 262 (268)
T COG3393 257 FREIGE 262 (268)
T ss_pred Ceecce
Confidence 998763
|
|
| >KOG2488 consensus Acetyltransferase (GNAT) domain-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.80 E-value=7.1e-05 Score=71.61 Aligned_cols=116 Identities=16% Similarity=0.145 Sum_probs=75.0
Q ss_pred cCHHHHHHHHHHHHHccc---cccCCH----HHHHhccCeEEEEEECC-eEEEEEEEeeecc--CCceEEeeEEEccCCc
Q 007903 457 TDLSGIKQIIQPLVESGA---LVRRTD----EELLKALDSFYVVEREG-QIIACAALFPFFK--EKCGEVAAIGVSPECR 526 (585)
Q Consensus 457 ~D~~~I~~Li~~~~~~~~---~~~~~~----e~l~~~i~~~~Va~~dg-~IVG~~~l~~~~~--~~~aeI~~L~V~PeyR 526 (585)
+|++-...|+..-....+ ..-|.+ +++...-..|+++.+++ ++|||.++....+ ....++..+-|.+.||
T Consensus 54 ~~ldw~f~L~k~nm~~~Y~qs~~Gw~~~~K~~El~~~~~~Yi~a~~~~~~~vgf~~Frf~vd~g~~vlYcyEvqv~~~yR 133 (202)
T KOG2488|consen 54 EDLDWCFSLFKKNMGAMYRQSSWGWDDNSKAKELRNRKLRYICAWNNKSKLVGFTMFRFTVDTGDPVLYCYEVQVASAYR 133 (202)
T ss_pred HHHHHHHHHHHhhhHHHhhhcccccCchhHHHHHhhccceEEEEEcCCCceeeEEEEEEEcccCCeEEEEEEEeehhhhh
Confidence 677777777644211111 111322 33444446778887776 8999999885433 2367888899999999
Q ss_pred CCcHHHHHHHHHHhhhHHHHHHcCCcccCccce--eccccccc-ccCeeecCc
Q 007903 527 GQGQGDKLLGLCIWPLLSETRYDHISTNGFPFL--RGRTHSYY-RLKFNCSSK 576 (585)
Q Consensus 527 GkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~--~~~a~~YY-rlGF~~~~~ 576 (585)
|+|||+.||+.++ ..+...+....-+... +.++..|| ++||.....
T Consensus 134 ~kGiGk~LL~~l~----~~a~~~~~~kVmLTVf~~N~~al~Fy~~~gf~~~~~ 182 (202)
T KOG2488|consen 134 GKGIGKFLLDTLE----KLADSRHMRKVMLTVFSENIRALGFYHRLGFVVDEE 182 (202)
T ss_pred ccChHHHHHHHHH----HHHHHHHhhhheeeeecccchhHHHHHHcCcccCCC
Confidence 9999999999999 6666555554322222 23445566 699987643
|
|
| >KOG3397 consensus Acetyltransferases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.79 E-value=8.7e-05 Score=69.81 Aligned_cols=77 Identities=16% Similarity=0.154 Sum_probs=59.2
Q ss_pred EEEECCeEEEEEEEeeecc-CCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceecccccccccC
Q 007903 492 VVEREGQIIACAALFPFFK-EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYYRLK 570 (585)
Q Consensus 492 Va~~dg~IVG~~~l~~~~~-~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YYrlG 570 (585)
.-+...++||...+.+..+ ++..++..+.|+.+.||+|+|+.||+.++ .+++..|+.+.-+.. ...-++|.++|
T Consensus 61 l~E~~~~VigH~rLS~i~n~~~al~VEsVVV~k~~RG~GFGk~lMk~~E----~~~R~~gf~~~yLsT-~DQ~~FYe~lG 135 (225)
T KOG3397|consen 61 LNEENDEVLGHSRLSHLPNRDHALWVESVVVKKDQRGLGFGKFLMKSTE----KWMREKGFNEAYLST-DDQCRFYESLG 135 (225)
T ss_pred ecccccceeeeeccccCCCCCceeEEEEEEEehhhccccHHHHHHHHHH----HHHHHhhhhheeeec-ccchhhhhhhc
Confidence 3355678999999986543 56789999999999999999999999999 999999987642221 12344555799
Q ss_pred eee
Q 007903 571 FNC 573 (585)
Q Consensus 571 F~~ 573 (585)
|+.
T Consensus 136 Ye~ 138 (225)
T KOG3397|consen 136 YEK 138 (225)
T ss_pred ccc
Confidence 984
|
|
| >TIGR01211 ELP3 histone acetyltransferase, ELP3 family | Back alignment and domain information |
|---|
Probab=97.77 E-value=5.2e-05 Score=84.67 Aligned_cols=81 Identities=15% Similarity=0.082 Sum_probs=60.9
Q ss_pred CCeEEEEEEEeeecc-------CCceEEeeEEEc-----------cCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcc
Q 007903 496 EGQIIACAALFPFFK-------EKCGEVAAIGVS-----------PECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFP 557 (585)
Q Consensus 496 dg~IVG~~~l~~~~~-------~~~aeI~~L~V~-----------PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~ 557 (585)
++.++||+.+..... ...+.|..|.|. |+|||+|+|++||++++ +.|++.|+......
T Consensus 422 ~~~l~G~lrlr~~~~~~~~~~~~~~a~IrelhV~G~~~~~~~~~~~~~rg~GiG~~Ll~~ae----~~Ar~~G~~~i~v~ 497 (522)
T TIGR01211 422 NDILIGFLRLRFPSEPAHRKEVDATALVRELHVYGSEVPIGERGDDEWQHRGYGRRLLEEAE----RIAAEEGSEKILVI 497 (522)
T ss_pred CCeEEEEEEEecCcccccccccCCCceEEEEEEeeeeccccccCChhHhCcCHHHHHHHHHH----HHHHHCCCCEEEEe
Confidence 568999999874221 235677777754 99999999999999999 99999999876543
Q ss_pred ceeccccccc-ccCeeecCcccccc
Q 007903 558 FLRGRTHSYY-RLKFNCSSKSFHIS 581 (585)
Q Consensus 558 ~~~~~a~~YY-rlGF~~~~~~~~~~ 581 (585)
. ...++.|| ++||...+.-|..+
T Consensus 498 s-~~~A~~FY~klGf~~~g~ym~K~ 521 (522)
T TIGR01211 498 S-GIGVREYYRKLGYELDGPYMSKR 521 (522)
T ss_pred e-CchHHHHHHHCCCEEEcceeEEe
Confidence 3 23455566 79999987766543
|
The Saccharomyces cerevisiae member YPL086C has been characterized in vitro as an N-terminal acetyltransferase for all four core histones. It is a component of the RNA polymerase II holoenzyme, designated Elp3p for Elongator Protein 3. Members of this family are found in eukaryotes and archaea. These proteins are part of the larger set of GNAT acetyltransferases. |
| >PF08445 FR47: FR47-like protein; InterPro: IPR013653 Proteins in this entry have a conserved region similar to the C-terminal region of the Drosophila melanogaster (Fruit fly) hypothetical protein FR47 (Q9VR51 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=97.75 E-value=5.9e-05 Score=64.04 Aligned_cols=61 Identities=20% Similarity=0.196 Sum_probs=44.4
Q ss_pred ceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee--cccccccccCeeecCcc
Q 007903 513 CGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR--GRTHSYYRLKFNCSSKS 577 (585)
Q Consensus 513 ~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~--~~a~~YYrlGF~~~~~~ 577 (585)
.++|..++++|+|||+|+|+.|+..+. +...+.|.....+.... .+...|.++||+.....
T Consensus 21 ~g~i~~v~t~p~~RrrGlg~~lv~~l~----~~~~~~g~~~~l~v~~~N~~s~~ly~klGf~~~~~~ 83 (86)
T PF08445_consen 21 DGEIGGVYTLPEHRRRGLGSALVAALA----RELLERGKTPFLYVDADNEASIRLYEKLGFREIEEE 83 (86)
T ss_dssp TCCEEEEEE-GGGTTSSHHHHHHHHHH----HHHHHTTSEEEEEEETT-HHHHHHHHHCT-EEEEEE
T ss_pred CcEEEEEEECHHHcCCCHHHHHHHHHH----HHHHhCCCcEEEEEECCCHHHHHHHHHcCCEEEEEE
Confidence 488999999999999999999999999 77777887654332211 23345668999987554
|
This protein has been found to consist of two N-acyltransferase-like domains swapped with the C-terminal strands. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups; PDB: 1SQH_A 3EC4_B. |
| >PF14542 Acetyltransf_CG: GCN5-related N-acetyl-transferase; PDB: 2H5M_A 2Q44_A 1XMT_A 2Q4Y_A 2IL4_A 2EVN_A 1R57_A | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00017 Score=60.09 Aligned_cols=57 Identities=23% Similarity=0.278 Sum_probs=47.6
Q ss_pred EEEECCeEEEEEEEeeeccCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCccc
Q 007903 492 VVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTN 554 (585)
Q Consensus 492 Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~ 554 (585)
.+..||+.+|++.... .++...|...+|.|++||||+|++|++.++ ++++++|.+-.
T Consensus 3 ~~~~~g~~~a~l~Y~~--~~~~~~i~hT~V~~~~rGqGia~~L~~~~l----~~a~~~~~kv~ 59 (78)
T PF14542_consen 3 ELKDDGEEIAELTYRE--DGGVIVITHTEVPPELRGQGIAKKLVEAAL----DYARENGLKVV 59 (78)
T ss_dssp EEESSTTEEEEEEEEE--SSSEEEEEEEEE-CSSSTTTHHHHHHHHHH----HHHHHTT-EEE
T ss_pred EEEECCEEEEEEEEEe--CCCEEEEEEEEECccccCCcHHHHHHHHHH----HHHHHCCCEEE
Confidence 3456688999998863 667889999999999999999999999999 99999998754
|
|
| >KOG0456 consensus Aspartate kinase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00087 Score=70.47 Aligned_cols=72 Identities=19% Similarity=0.256 Sum_probs=55.9
Q ss_pred cCCCeEEEcCC-ccC-CCCcee---eeChHHHHHHHHHHcCCCEEEEeeccccc---C----CCCcccccccHHHHHHHH
Q 007903 249 DGGCLVILSNL-GYS-SSGEVL---NCNTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTLQEADSLI 316 (585)
Q Consensus 249 ~~G~IPVi~~v-~~~-~~G~~~---nid~D~lAa~lA~~L~AdkLIilTDV~gl---~----~~~~lI~~it~~e~~~li 316 (585)
..+.|||+.+. |-. +.|-+. ..-+|..|+.||.+|++|.+-+--||||+ | |.+++++.+|.+|+.+|.
T Consensus 257 ken~VPVvTGf~Gk~~~tg~lt~lGRG~sDl~At~i~~al~~~EiQVWKdVDGv~T~DP~~~p~Ar~vp~lT~dEAaELa 336 (559)
T KOG0456|consen 257 KENAVPVVTGFLGKGWPTGALTTLGRGGSDLTATTIGKALGLDEIQVWKDVDGVLTCDPRIYPGARLVPYLTFDEAAELA 336 (559)
T ss_pred cCCccceEeeccccCccccceecccCCchhhHHHHHHHHcCchhhhhhhhcCceEecCCccCCCccccCccCHHHHHHHH
Confidence 34789999873 421 233222 33689999999999999999999999997 4 568999999999998886
Q ss_pred Hhhc
Q 007903 317 RQRV 320 (585)
Q Consensus 317 ~~~~ 320 (585)
--|+
T Consensus 337 YfGa 340 (559)
T KOG0456|consen 337 YFGA 340 (559)
T ss_pred hhhh
Confidence 5444
|
|
| >COG2388 Predicted acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00045 Score=60.15 Aligned_cols=65 Identities=26% Similarity=0.314 Sum_probs=56.3
Q ss_pred CeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcc
Q 007903 488 DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFP 557 (585)
Q Consensus 488 ~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~ 557 (585)
..+|++..+|+.+|.+..++ ..++...|.+-+|.+++||||+|++|+++++ +.|++.|++..-++
T Consensus 15 ~~~y~~~~~G~~~~e~~y~~-~~~~~i~i~HT~V~d~lrGqGia~~L~~~al----~~ar~~g~kiiP~C 79 (99)
T COG2388 15 NGRYVLTDEGEVIGEATYYD-RGENLIIIDHTYVPDELRGQGIAQKLVEKAL----EEAREAGLKIIPLC 79 (99)
T ss_pred ceEEEEecCCcEEEEEEEec-CCCCEEEEecCcCCHHHcCCcHHHHHHHHHH----HHHHHcCCeEcccc
Confidence 56888999999999988773 4557888999999999999999999999999 99999998765443
|
|
| >COG3981 Predicted acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.0011 Score=62.76 Aligned_cols=62 Identities=24% Similarity=0.444 Sum_probs=50.1
Q ss_pred CeEEEEEECCeEEEEEEEeeecc----CCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCccc
Q 007903 488 DSFYVVEREGQIIACAALFPFFK----EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTN 554 (585)
Q Consensus 488 ~~~~Va~~dg~IVG~~~l~~~~~----~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~ 554 (585)
..+|....|+++||++.+....+ ..-++|. -.|.|+.||+|+|++|+..++ +.|+++|++..
T Consensus 69 ~~y~~v~~d~~ivG~i~lRh~Ln~~ll~~gGHIG-Y~VrPseR~KGYA~emLkl~L----~~ar~lgi~~V 134 (174)
T COG3981 69 STYWAVDEDGQIVGFINLRHQLNDFLLEEGGHIG-YSVRPSERRKGYAKEMLKLAL----EKARELGIKKV 134 (174)
T ss_pred eeEEEEecCCcEEEEEEeeeecchHHHhcCCccc-ceeChhhhccCHHHHHHHHHH----HHHHHcCCCeE
Confidence 35666667899999999974322 2356674 589999999999999999999 99999999874
|
|
| >PF13718 GNAT_acetyltr_2: GNAT acetyltransferase 2; PDB: 2ZPA_B | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0013 Score=64.42 Aligned_cols=63 Identities=21% Similarity=0.280 Sum_probs=43.6
Q ss_pred CHHHHHhcc----CeEEEEEECC--eEEEEEEEeee------------------------------------ccCCceEE
Q 007903 479 TDEELLKAL----DSFYVVEREG--QIIACAALFPF------------------------------------FKEKCGEV 516 (585)
Q Consensus 479 ~~e~l~~~i----~~~~Va~~dg--~IVG~~~l~~~------------------------------------~~~~~aeI 516 (585)
++.++..-+ ..+|++..++ +++|.+.+..- ..-....|
T Consensus 14 sPnDL~~LlDaP~h~l~~l~~~~~p~il~~~~v~~EG~l~~~l~~~i~~g~rRp~G~LiP~~L~~~~~~~~f~~l~g~RI 93 (196)
T PF13718_consen 14 SPNDLQLLLDAPNHRLFVLLQPGDPDILGVAQVALEGGLSKELIEAILSGGRRPKGHLIPQTLAQHFGDPEFAQLSGARI 93 (196)
T ss_dssp -HHHHHHHHH-TTEEEEEEE-SS--SEEEEEEEEEEE---HHHHHHHHTTS---SS-HHHHHHHHHSS-TTGGGSEEEEE
T ss_pred CHHHHHHHhcCCcceeehhccCCCceEEEEEEEEecCCCCHHHHHHHHhCCCCCCCCCHHHHHHHHhCCHHHHhhcceeE
Confidence 345544333 5788888888 99999887421 00124579
Q ss_pred eeEEEccCCcCCcHHHHHHHHHHhh
Q 007903 517 AAIGVSPECRGQGQGDKLLGLCIWP 541 (585)
Q Consensus 517 ~~L~V~PeyRGkGIGk~LL~~~~~~ 541 (585)
.+|+|+|++|++|+|++|++.++++
T Consensus 94 vRIAvhP~~q~~G~Gs~lL~~l~~~ 118 (196)
T PF13718_consen 94 VRIAVHPDLQRMGYGSRLLQQLEQY 118 (196)
T ss_dssp EEEEE-CCC-SSSHHHHHHHHHHHT
T ss_pred EEEEEChhhhcCCHHHHHHHHHHHH
Confidence 9999999999999999999999933
|
|
| >KOG3138 consensus Predicted N-acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.00044 Score=66.96 Aligned_cols=121 Identities=16% Similarity=0.108 Sum_probs=71.5
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHHhcc----CeEEEEEECCeEEEEEEEeeeccC----C-----ceE
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFFKE----K-----CGE 515 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i----~~~~Va~~dg~IVG~~~l~~~~~~----~-----~ae 515 (585)
..+|..++.|+..+..|... .+....... +..+. +..-++..++..+|-..+...... + ..+
T Consensus 17 ~~l~~it~~nl~~~~~l~~~----~fP~~y~~k-fy~~~~~~~~~~~~A~~~~~~v~a~~~k~~~~~~~~~r~~~~~~~y 91 (187)
T KOG3138|consen 17 IELRLITPNNLKQLKQLNED----IFPISYVDK-FYPDVLSNGDLTQLAYYNEIAVGAVACKLIKFVQNAKRLFGNRVIY 91 (187)
T ss_pred eeeccCCcchHHHHHHHhcc----ccCcchHHH-HHHHHHhcCCHHHhhhhccccccceeeeehhhhhhhhhhhccceeE
Confidence 57899999999999998332 222111111 22221 212223334444444444321110 1 378
Q ss_pred EeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcC-CcccCccc---eecccccccccCeeecCccc
Q 007903 516 VAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDH-ISTNGFPF---LRGRTHSYYRLKFNCSSKSF 578 (585)
Q Consensus 516 I~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~g-i~~~g~~~---~~~~a~~YYrlGF~~~~~~~ 578 (585)
|..+.|+|.||.+|||++|++++. +.+.... +....+.. ......+|.+.||++.....
T Consensus 92 i~~Lgvl~~yR~~gIGs~Ll~~~~----~~~~~~~~~~~v~lHv~~~n~~ai~~Y~~~gF~~~~~~~ 154 (187)
T KOG3138|consen 92 ILSLGVLPRYRNKGIGSKLLEFVK----KYCSEAHQCRRVYLHVQAVNESAIEFYEKRGFEIVERLK 154 (187)
T ss_pred EEeecccHHHHhcchHHHHHHHHH----HHHhcccccceEEEEEEeCCCcHHHHHHhcCceEeeccc
Confidence 999999999999999999999999 7666665 33332221 12333445579999986543
|
|
| >PF04958 AstA: Arginine N-succinyltransferase beta subunit; InterPro: IPR007041 Arginine N-succinyltransferase catalyses the transfer of succinyl-CoA to arginine to produce succinylarginine | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0017 Score=68.49 Aligned_cols=91 Identities=21% Similarity=0.335 Sum_probs=56.5
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHHhcc------------------CeEEEEEE--CCeEEEEEEEee-
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL------------------DSFYVVER--EGQIIACAALFP- 507 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i------------------~~~~Va~~--dg~IVG~~~l~~- 507 (585)
+.||+++.+|+++|.+|....-.--..+|.+.+.+.+.+ ..+||.++ .|+|+|++.+..
T Consensus 2 ~viRp~~~~Dl~aL~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~sFa~~~~~~~~~~~YlfVLED~~tg~vvGts~I~a~ 81 (342)
T PF04958_consen 2 LVIRPARPSDLDALYALARESGPGFTSLPPDREALAERIERSERSFAGRDVDFPGDEGYLFVLEDTETGEVVGTSAIEAA 81 (342)
T ss_dssp EEEEE--GGGHHHHHHHHHHS-TT-TTS-S-HHHHHHHHHHHHHHHH-TT----S--EEEEEEEETTT--EEEEEEEESS
T ss_pred eEEecCchhhHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHhhccccCCCCccceEEEEEecCCCcEEEEEeEEec
Confidence 468999999999999994432211123455555544332 24677775 599999998831
Q ss_pred ------e----------------------------ccCCceEEeeEEEccCCcCCcHHHHHHHHHH
Q 007903 508 ------F----------------------------FKEKCGEVAAIGVSPECRGQGQGDKLLGLCI 539 (585)
Q Consensus 508 ------~----------------------------~~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~ 539 (585)
+ .-....||..++++|+||+.|.|+.|-..-.
T Consensus 82 vG~~~PfY~yr~~~~vh~S~~L~v~~~~~~L~L~~d~tG~sEl~tLfL~p~~R~~~~G~lLSr~Rf 147 (342)
T PF04958_consen 82 VGLDEPFYSYRVSTLVHASRELGVRNRHETLTLSNDYTGCSELCTLFLDPDYRGGGNGRLLSRSRF 147 (342)
T ss_dssp TTSSS---EEEEEEEEEEETTTTEEEEEEEEEEE-TTTTSEEEEEEEE-GGGTTSHHHHHHHHHHH
T ss_pred cCCCCCcEEEEcCceeEcCcccCCccceeeEeeecCCCCCeeeEEEEECHHHcCCchHHHHHHHHH
Confidence 0 0135679999999999999999998866443
|
This is the first step in arginine catabolism via the arginine succinyltransferase pathway. Six major L-arginine-degrading pathways have been described for prokaryotes []. Many bacteria arginine succinyltransferase 2.3.1.109 from EC, which is the AstA protein of the succinyltransferase (ast) pathway operon consists of five genes. In a few species, such as Pseudomonas aeruginosa, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST). This entry represents the family of proteins that make up the beta subunit of the heterodimer of Ast and AOST.; GO: 0008791 arginine N-succinyltransferase activity, 0006527 arginine catabolic process; PDB: 1YLE_A. |
| >COG3053 CitC Citrate lyase synthetase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0036 Score=63.81 Aligned_cols=109 Identities=16% Similarity=0.132 Sum_probs=76.2
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHHhccCeEEEEEE-CCeEEEEEEEeeeccCCceEEeeEEEccCCcC
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVER-EGQIIACAALFPFFKEKCGEVAAIGVSPECRG 527 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i~~~~Va~~-dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyRG 527 (585)
+.+++..+.|...+..+-.-+.+.+.. ++..++.+.++.. ++++|+|+.+.- .-|.+++|+|.+||
T Consensus 4 ~~~~~v~~~e~~k~~~i~~fL~~~~l~-------~d~~ve~~v~~~~~~~~iiacGsiaG------nvikcvAvs~s~qG 70 (352)
T COG3053 4 YTFSRVKRSEKKKMAEIAEFLHQNDLR-------VDTTVEYFVAIYRDNEEIIACGSIAG------NVIKCVAVSESLQG 70 (352)
T ss_pred eEEEEEccchhhHHHHHHHHHhhcCce-------ecccceEEEEEEcCCCcEEEeccccc------ceeEEEEechhccc
Confidence 456777778888777774444444332 3344455555555 499999998862 24889999999999
Q ss_pred CcHHHHHHHHHHhhhHHHHHHcCCcccCccceecccccccccCeeec
Q 007903 528 QGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYYRLKFNCS 574 (585)
Q Consensus 528 kGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YYrlGF~~~ 574 (585)
-|+.-+|+.+++ +.+-++|....=.......+..|...||...
T Consensus 71 eGl~lkl~TeLi----n~ay~~g~~hLFiyTKp~~~~lFk~~GF~~i 113 (352)
T COG3053 71 EGLALKLVTELI----NLAYERGRTHLFIYTKPEYAALFKQCGFSEI 113 (352)
T ss_pred ccHHHHHHHHHH----HHHHHcCCceEEEEechhHHHHHHhCCceEe
Confidence 999999999999 8888888876422222234445667898765
|
|
| >KOG3234 consensus Acetyltransferase, (GNAT) family [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0017 Score=60.56 Aligned_cols=90 Identities=22% Similarity=0.139 Sum_probs=60.2
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHHhccCeEEEEEE-CCeEEEEEEEeeecc---CCceEEeeEEEccC
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVER-EGQIIACAALFPFFK---EKCGEVAAIGVSPE 524 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i~~~~Va~~-dg~IVG~~~l~~~~~---~~~aeI~~L~V~Pe 524 (585)
.++|+.+++|+-..-.+.-....+.+..+.-...+...-..+.+++. ++++-|++.-.. .. .-.+++..+.|.|+
T Consensus 2 tt~r~f~~~Dlf~fNninLDpltEt~~~~Fyl~yl~~~pe~~~~a~~p~~~imgyimgk~-Eg~~~~wh~HvTAltVap~ 80 (173)
T KOG3234|consen 2 TTIRPFTPQDLFKFNNINLDPLTETFPISFYLIYLAIWPEDFIVAEAPTGEIMGYIMGKV-EGKDTEWHGHVTALTVAPD 80 (173)
T ss_pred CccccccHHHHHhhccccccccccccceehhHHHHHhChHHhEeccCCCCceEEEEeeec-cccCcceeeEEEEEEechh
Confidence 36888888887766655322233334333333333333345666654 578999988742 21 23578999999999
Q ss_pred CcCCcHHHHHHHHHH
Q 007903 525 CRGQGQGDKLLGLCI 539 (585)
Q Consensus 525 yRGkGIGk~LL~~~~ 539 (585)
||+.|+|+.||+.++
T Consensus 81 ~Rrl~la~~lm~~le 95 (173)
T KOG3234|consen 81 YRRLGLAAKLMDTLE 95 (173)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999999999
|
|
| >PF12568 DUF3749: Acetyltransferase (GNAT) domain; InterPro: IPR024612 This domain is found in uncharacterised proteins from Gammaproteobacteria, and is approximately 40 amino acids in length | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0049 Score=55.89 Aligned_cols=76 Identities=17% Similarity=0.221 Sum_probs=51.6
Q ss_pred cccccCHHHHHHHHHHHHHccccccCCHHHHHhcc---CeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCCcCCc
Q 007903 453 TAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQG 529 (585)
Q Consensus 453 ~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i---~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGkG 529 (585)
..++.|.-.+..|+ ...+.+.+...+ ..+|++..|++++|-+.+.. ++..++|..|+|.|--|++|
T Consensus 9 ~ls~Qd~iDL~KIw---------p~~~~~~l~~~l~~~~~l~aArFNdRlLgAv~v~~--~~~~~~L~~l~VRevTRrRG 77 (128)
T PF12568_consen 9 TLSEQDRIDLAKIW---------PQQDPEQLEQWLDEGHRLFAARFNDRLLGAVKVTI--SGQQAELSDLCVREVTRRRG 77 (128)
T ss_dssp S--HHHHHHHHHH----------TTS----------SSEEEEEEEETTEEEEEEEEEE--ETTEEEEEEEEE-TT-SSSS
T ss_pred CCCHHHHHHHHHhC---------CCCCHHHHHHHhccCCeEEEEEechheeeeEEEEE--cCcceEEeeEEEeecccccc
Confidence 34556666666663 222344555444 67899999999999999874 46799999999999999999
Q ss_pred HHHHHHHHHH
Q 007903 530 QGDKLLGLCI 539 (585)
Q Consensus 530 IGk~LL~~~~ 539 (585)
+|+.|++.+.
T Consensus 78 VG~yLlee~~ 87 (128)
T PF12568_consen 78 VGLYLLEEVL 87 (128)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999998
|
It contains two completely conserved residues (D and I) that may be functionally important. Proteins having this domain are frequently annotated as acetyltransferases of the GNAT family; however there is little accompanying annotation to confirm this.; PDB: 2K5T_A. |
| >PF04768 DUF619: Protein of unknown function (DUF619); InterPro: IPR006855 This region of unknown function is found at the C terminus of Neurospora crassa acetylglutamate synthase (2 | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0027 Score=60.87 Aligned_cols=108 Identities=19% Similarity=0.231 Sum_probs=65.6
Q ss_pred hHHHHHhcCCCceeeccccc-ccccccccc-CHHHHHHHHHHHHHccccccCCHHHHHhccCeEEEEEECCeEEEEEEEe
Q 007903 429 LLLELFKRDGMGTMVASDLY-EGTRTAKVT-DLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALF 506 (585)
Q Consensus 429 ll~el~~~~~~GT~i~~d~~-~~IR~at~~-D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i~~~~Va~~dg~IVG~~~l~ 506 (585)
|..|||+..|.||+|.+... ........- |.+.+.+++..........+.-.+.+...+..+++ ++..-|.+.+.
T Consensus 2 L~kELFt~sgagTlirrG~~i~~~~s~~~~~d~~kL~~ll~~sf~~~~~v~~yl~~l~~~~~~iy~---d~~y~~~AIVt 78 (170)
T PF04768_consen 2 LQKELFTDSGAGTLIRRGYKILKHSSLSEFVDLDKLRALLERSFGGKLDVDHYLDRLNNRLFKIYV---DEDYEGAAIVT 78 (170)
T ss_dssp HHHHHHSSSTSSEEEE----EEEESSCCCSS-HHHHHHHHHHHSTSSSBHTTHHHHHHTS-SEEEE---ETTSSEEEEEE
T ss_pred ccchhcCCCCCceEEecCeeeEEecCccccCCHHHHHHHHHhcccccccHHHHHHHhhccceEEEE---eCCceEEEEEE
Confidence 67899999999999987744 333444444 89999998654331111212222333333344444 23333444443
Q ss_pred e---eccCCceEEeeEEEccCCcCCcHHHHHHHHHH
Q 007903 507 P---FFKEKCGEVAAIGVSPECRGQGQGDKLLGLCI 539 (585)
Q Consensus 507 ~---~~~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~ 539 (585)
+ ...+..+++..++|.|..||.|++..+++.+.
T Consensus 79 ~e~~~~~~~v~yLdKFav~~~~~g~gv~D~vf~~i~ 114 (170)
T PF04768_consen 79 PEGPDSNGPVPYLDKFAVSKSAQGSGVADNVFNAIR 114 (170)
T ss_dssp EE-SCTCTSEEEEEEEEE-HHHHHTTHHHHHHHHHH
T ss_pred ecCCCCCCCCeEEEEEEecchhhhcCHHHHHHHHHH
Confidence 2 22346899999999999999999999999998
|
7.2.8 from EC). It is also found C-terminal to the amino acid kinase region in some fungal acetylglutamate kinase enzymes (IPR001048 from INTERPRO). These enzymes play a role in arginine biosynthesis.; PDB: 3S6K_A 4AB7_F 3ZZF_B 3ZZI_D 3ZZH_A 3ZZG_A 3S6G_Y 3S6H_A 3S7Y_A. |
| >PRK10456 arginine succinyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0039 Score=65.70 Aligned_cols=89 Identities=17% Similarity=0.224 Sum_probs=61.4
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHHhcc----------------CeEEEEEE--CCeEEEEEEEee---
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----------------DSFYVVER--EGQIIACAALFP--- 507 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i----------------~~~~Va~~--dg~IVG~~~l~~--- 507 (585)
+.||+++.+|+++|.+|....-.--..+|.+.+.+.+.+ ..+||.++ .|+|+|++.+..
T Consensus 2 ~vvRpv~~~Dl~aL~~LA~~sG~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~YlFVLED~~tg~vvGts~I~a~vG 81 (344)
T PRK10456 2 MVIRPVERSDLAALMQLAGKTGGGLTSLPANEATLAARIERALKTWQGELPKSEQGYVFVLEDSETGTVAGICAIEVAVG 81 (344)
T ss_pred eEEecCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHhcCcCCCCCccEEEEEEeCCCCcEEEEEeEEeccc
Confidence 468999999999999994322111124455555554433 35677774 589999998731
Q ss_pred ----e----------------------------ccCCceEEeeEEEccCCcCCcHHHHHHHH
Q 007903 508 ----F----------------------------FKEKCGEVAAIGVSPECRGQGQGDKLLGL 537 (585)
Q Consensus 508 ----~----------------------------~~~~~aeI~~L~V~PeyRGkGIGk~LL~~ 537 (585)
+ .-....||+.++++|+||+.|.|+.|-..
T Consensus 82 ~~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfl~p~~R~~~~G~LLSr~ 143 (344)
T PRK10456 82 LNDPWYNYRVGTLVHASKELNVYNALPTLFLSNDHTGSSELCTLFLDPDWRKEGNGYLLSKS 143 (344)
T ss_pred CCCCCEEEEcCceeecCcccCCceeeeeEEeeccCCCCceeEEEEECHHHcCCCchhHHHHH
Confidence 0 01245689999999999999999877554
|
|
| >TIGR03244 arg_catab_AstA arginine N-succinyltransferase | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0053 Score=64.57 Aligned_cols=87 Identities=20% Similarity=0.285 Sum_probs=60.1
Q ss_pred cccccccCHHHHHHHHHHHHHccccccCCHHHHHhcc----------------CeEEEEEE--CCeEEEEEEEee-----
Q 007903 451 TRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----------------DSFYVVER--EGQIIACAALFP----- 507 (585)
Q Consensus 451 IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i----------------~~~~Va~~--dg~IVG~~~l~~----- 507 (585)
||+++.+|+++|.+|....-.--..+|.+.+.+.+.+ ..+||.++ .|+|+|++.+..
T Consensus 2 vRPv~~~Dl~aL~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~YlFVLEDt~tg~vvGts~I~a~vG~~ 81 (336)
T TIGR03244 2 VRPVETSDLDALYQLAQSTGIGLTSLPANEDLLSARIERAEKTFSGELTRAEQGYLFVLEDTETGTVAGVSAIEAAVGLE 81 (336)
T ss_pred cccCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHhcCcCCCCCccEEEEEEeCCCCeEEEEEeEEecccCC
Confidence 7999999999999994322111124455555554433 35677775 589999998731
Q ss_pred --e----------------------------ccCCceEEeeEEEccCCcCCcHHHHHHHH
Q 007903 508 --F----------------------------FKEKCGEVAAIGVSPECRGQGQGDKLLGL 537 (585)
Q Consensus 508 --~----------------------------~~~~~aeI~~L~V~PeyRGkGIGk~LL~~ 537 (585)
+ .-....||+.++++|+||+.|.|+.|-..
T Consensus 82 ~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~SElctLfL~p~~R~~~~G~LLSr~ 141 (336)
T TIGR03244 82 EPFYNYRVGTVVHASKELGIYKALETLFLSNDLTGYSELCTLFLDPDYRKGGNGRLLSKS 141 (336)
T ss_pred CCCEEEEcCceeecCcccCCceeeeeEEeeccCCCCeeeEEEEECHHHcCCcchhhHHHH
Confidence 0 01245789999999999999999877553
|
In many bacteria, the arginine succinyltransferase (ast) pathway operon consists of five genes, including this protein, arginine N-succinyltransferase (EC 2.3.1.109). In a few species, such as Pseudomonas aeruginosa, the member of this family is encoded adjacent to a paralog, and the two polypeptides form a heterodimeric enzyme, active on both arginine and ornithine. In such species, this polypeptide may be treated as the beta subunit of an enzyme that may be named either arginine N-succinyltransferase (AST) or arginine and orthithine N-succinyltransferase (AOST). |
| >PF12746 GNAT_acetyltran: GNAT acetyltransferase; PDB: 3G3S_B | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0051 Score=63.06 Aligned_cols=89 Identities=19% Similarity=0.205 Sum_probs=56.2
Q ss_pred CHHHHHhccCeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccc
Q 007903 479 TDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPF 558 (585)
Q Consensus 479 ~~e~l~~~i~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~ 558 (585)
+.+++.+. ..-+++..+|+||+-|.... ..++..+| .|.++|+|||||+|+.+-..++ .+|.++|+....=..
T Consensus 157 s~e~Fl~~-G~Gf~i~~~~~iVs~~~s~~-~~~~~~EI-~I~T~~~yR~kGLA~~~aa~~I----~~Cl~~~l~P~WDc~ 229 (265)
T PF12746_consen 157 SYEDFLKN-GFGFCILHDGEIVSGCSSYF-VYENGIEI-DIETHPEYRGKGLATAVAAAFI----LECLENGLYPSWDCH 229 (265)
T ss_dssp SHHHHHHH---EEEEEETTEEEEEEEEEE-EETTEEEE-EEEE-CCCTTSSHHHHHHHHHH----HHHHHTT-EEE-EES
T ss_pred CHHHHHhc-CcEEEEEECCEEEEEEEEEE-EECCEEEE-EEEECHHhhcCCHHHHHHHHHH----HHHHHCCCCcCeeCC
Confidence 44444333 45567778899987666553 33456788 5999999999999999999999 999999987642111
Q ss_pred eecccccccccCeeec
Q 007903 559 LRGRTHSYYRLKFNCS 574 (585)
Q Consensus 559 ~~~~a~~YYrlGF~~~ 574 (585)
.....+.=.++||...
T Consensus 230 N~~S~~lA~kLGf~~~ 245 (265)
T PF12746_consen 230 NLASIALAEKLGFHFD 245 (265)
T ss_dssp SHHHHHHHHHCT--EE
T ss_pred CHHHHHHHHHcCCccc
Confidence 1122223346787765
|
|
| >TIGR03245 arg_AOST_alph arginine/ornithine succinyltransferase, alpha subunit | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0057 Score=64.24 Aligned_cols=87 Identities=15% Similarity=0.259 Sum_probs=59.1
Q ss_pred cccccccCHHHHHHHHHHHHHccccccCCHHHHHhcc-----------------CeEEEEEE--CCeEEEEEEEee----
Q 007903 451 TRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL-----------------DSFYVVER--EGQIIACAALFP---- 507 (585)
Q Consensus 451 IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i-----------------~~~~Va~~--dg~IVG~~~l~~---- 507 (585)
||+++.+|+++|.+|....-.--..+|.+.+.+.+.+ ..+||.++ .|+|+|++.+..
T Consensus 2 iRpv~~~Dl~aL~~LA~~sG~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~~YlFVLEDt~tg~vvGts~I~a~vG~ 81 (336)
T TIGR03245 2 VRPSRFADLPAIERLANESAIGVTSLPADRAKLGEKIAQSERSFAAEVSFVGEERYLFVLEDTETGKLLGTSSIVASAGY 81 (336)
T ss_pred cccCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHHHhhcCCCCCccEEEEEEeCCCCcEEEEEeEEecccC
Confidence 7999999999999994321111123455555444332 35677774 589999998732
Q ss_pred ---e----------------------------ccCCceEEeeEEEccCCcCCcHHHHHHHH
Q 007903 508 ---F----------------------------FKEKCGEVAAIGVSPECRGQGQGDKLLGL 537 (585)
Q Consensus 508 ---~----------------------------~~~~~aeI~~L~V~PeyRGkGIGk~LL~~ 537 (585)
+ .-....||+.++++|+||+-|.|+.|-..
T Consensus 82 ~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfL~p~~R~~~~G~lLSr~ 142 (336)
T TIGR03245 82 GEPFYSYRNDTLIHASRELKVNNKIHVLYMCHELTGSSLLCSFYVDPRLRKTEAAELLSRA 142 (336)
T ss_pred CCCCEEEEcCceeecCcccCCccceeeEEeeccCCCCeeeEEEEECHHHcCCCchhHHHHH
Confidence 0 01245789999999999999999877554
|
In some bacteria, including Pseudomonas aeruginosa, the astB gene (arginine N-succinyltransferase) is replaced by tandem paralogs that form a heterodimer. This heterodimer from P. aeruginosa is characterized as arginine and ornithine N-2 succinyltransferase (AOST). Members of this protein family represent the less widespread paralog, designated AruI, or arginine/ornithine succinyltransferase, alpha subunit. |
| >TIGR03243 arg_catab_AOST arginine and ornithine succinyltransferase subunits | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.0072 Score=63.48 Aligned_cols=87 Identities=18% Similarity=0.265 Sum_probs=58.7
Q ss_pred cccccccCHHHHHHHHHHHHHccccccCCHHHHHhcc----------------CeEEEEEE--CCeEEEEEEEee-----
Q 007903 451 TRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----------------DSFYVVER--EGQIIACAALFP----- 507 (585)
Q Consensus 451 IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i----------------~~~~Va~~--dg~IVG~~~l~~----- 507 (585)
||+++.+|+++|.+|....-.--..+|.+.+.+.+.+ ..+||.++ .|+|+|++.+..
T Consensus 2 vRpv~~~Dl~aL~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~YlFVLED~~tg~vvGts~I~a~vG~~ 81 (335)
T TIGR03243 2 VRPVRTSDLDALMQLARESGIGLTSLPADRAALGSRIARSEKSFAGESTRGEEGYLFVLEDTETGTVAGVSAIEAAVGLD 81 (335)
T ss_pred cccCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHHhcccCCCCccEEEEEEeCCCCeEEEEEeEEecccCC
Confidence 7999999999999994322111123444444443322 35667774 589999998732
Q ss_pred --e----------------------------ccCCceEEeeEEEccCCcCCcHHHHHHHH
Q 007903 508 --F----------------------------FKEKCGEVAAIGVSPECRGQGQGDKLLGL 537 (585)
Q Consensus 508 --~----------------------------~~~~~aeI~~L~V~PeyRGkGIGk~LL~~ 537 (585)
+ .-....||+.++++|+||+.|.|+.|-..
T Consensus 82 ~PfY~yrv~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfL~p~~R~~~~G~LLSr~ 141 (335)
T TIGR03243 82 EPFYNYRVGTLVHASRELGVYNKIPTLTLSNDLTGSSELCTLFLDPDYRKGGNGRLLSRS 141 (335)
T ss_pred CCCEEEEcCceeecCcccCCccceeeEEeeccCCCCeeeEEEEECHHHcCCCchhhHHHH
Confidence 0 01246789999999999999999877554
|
In many bacteria, the sole member of this protein family is arginine N-succinyltransferase (EC 2.3.1.109), the AstA protein of the arginine succinyltransferase (ast) pathway. However, in Pseudomonas aeruginosa and several other species, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST). |
| >PF08444 Gly_acyl_tr_C: Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region; InterPro: IPR013652 This entry represents mammalian-specific glycine N-acyltransferase (also called aralkyl acyl-CoA:amino acid N-acyltransferase; 2 | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.0055 Score=52.20 Aligned_cols=75 Identities=17% Similarity=0.096 Sum_probs=56.2
Q ss_pred EEEECCeEEEEEEEeeeccCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee--ccccccccc
Q 007903 492 VVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR--GRTHSYYRL 569 (585)
Q Consensus 492 Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~--~~a~~YYrl 569 (585)
+...+|++|-..... .++++..-|..|+|||||+.+.++.... +...++|+.-.++.... ...+..+.+
T Consensus 3 llgpeG~PVSW~lmd-----qtge~rmgyTlPeyR~~G~~~~v~~~~~----~~L~~~g~P~Y~hv~~~N~~~~r~~~~l 73 (89)
T PF08444_consen 3 LLGPEGNPVSWSLMD-----QTGEMRMGYTLPEYRGQGLMSQVMYHLA----QYLHKLGFPFYGHVDEDNEASQRLSKSL 73 (89)
T ss_pred ccCCCCCEeEEEEec-----ccccccccccCHhHhcCCHHHHHHHHHH----HHHHHCCCCeEeehHhccHHHHHHHHHC
Confidence 345678888887765 3788999999999999999999999999 88888888765443222 233346678
Q ss_pred CeeecC
Q 007903 570 KFNCSS 575 (585)
Q Consensus 570 GF~~~~ 575 (585)
||...+
T Consensus 74 g~~~~p 79 (89)
T PF08444_consen 74 GFIFMP 79 (89)
T ss_pred CCeecC
Confidence 887654
|
3.1.13 from EC). Mitochondrial acyltransferases catalyse the transfer of an acyl group from acyl-CoA to the N terminus of glycine to produce N-acylglycine. These enzymes can conjugate a multitude of substrates to form a variety of N-acylglycines. The CoA derivatives of a number of aliphatic and aromatic acids, but not phenylacetyl-CoA or (indol-3-yl)acetyl-CoA, can act as donor [, ]. |
| >PF13480 Acetyltransf_6: Acetyltransferase (GNAT) domain | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.047 Score=49.12 Aligned_cols=61 Identities=21% Similarity=0.095 Sum_probs=51.5
Q ss_pred eEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccC
Q 007903 489 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNG 555 (585)
Q Consensus 489 ~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g 555 (585)
.++++..+|++||+..... .++..+......+|+|+..+.|..|+.+++ ++|.+.|+....
T Consensus 72 ~l~~~~~~g~~va~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~l~~~~i----~~a~~~g~~~~d 132 (142)
T PF13480_consen 72 RLFVLYDGGEPVAFALGFR--HGGTLYYWYGGYDPEYRKYSPGRLLLWEAI----RWAIERGLRYFD 132 (142)
T ss_pred EEEEEEECCEEEEEEEEEE--ECCEEEEEEEEECHhhHhCCHHHHHHHHHH----HHHHHCCCCEEE
Confidence 5677888999999987663 445777788889999999999999999999 999999987643
|
|
| >COG0454 WecD Histone acetyltransferase HPA2 and related acetyltransferases [Transcription / General function prediction only] | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.0041 Score=51.19 Aligned_cols=30 Identities=40% Similarity=0.533 Sum_probs=27.6
Q ss_pred EEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCc
Q 007903 519 IGVSPECRGQGQGDKLLGLCIWPLLSETRYDHIS 552 (585)
Q Consensus 519 L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~ 552 (585)
++|+|+|||+|+|++|+++++ ++++..++.
T Consensus 87 l~v~~~~rg~Gig~~Ll~~~~----~~~~~~g~~ 116 (156)
T COG0454 87 LYVLPEYRGKGIGSALLEAAL----EWARKRGIS 116 (156)
T ss_pred EEecchhhccchHHHHHHHHH----HHHHHcCce
Confidence 999999999999999999999 888887774
|
|
| >COG1670 RimL Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.014 Score=54.85 Aligned_cols=75 Identities=17% Similarity=0.190 Sum_probs=51.5
Q ss_pred CeEEEEEEEeeec---cCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHH-HcCCcccC---ccceeccccccccc
Q 007903 497 GQIIACAALFPFF---KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETR-YDHISTNG---FPFLRGRTHSYYRL 569 (585)
Q Consensus 497 g~IVG~~~l~~~~---~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~-~~gi~~~g---~~~~~~~a~~YYrl 569 (585)
+++||.+.+.... ....++|. ..+.|+|||+|+|+..+..++ +++- ..++.... +.........+.|+
T Consensus 77 ~~~iG~~~~~~~~~~~~~~~~~ig-~~l~~~~~g~G~~tea~~~~l----~~~f~~~~l~ri~~~~~~~N~~S~rv~ek~ 151 (187)
T COG1670 77 GELIGVIGLSDIDRAANGDLAEIG-YWLDPEYWGKGYATEALRALL----DYAFEELGLHRIEATVDPENEASIRVYEKL 151 (187)
T ss_pred CeEEEEEEEEEeccccccceEEEE-EEEChHHhcCchHHHHHHHHH----HHhhhhcCceEEEEEecCCCHHHHHHHHHc
Confidence 4899999998543 24566764 667999999999999999999 5543 36665532 12222334456688
Q ss_pred CeeecCc
Q 007903 570 KFNCSSK 576 (585)
Q Consensus 570 GF~~~~~ 576 (585)
||+..+.
T Consensus 152 Gf~~eg~ 158 (187)
T COG1670 152 GFRLEGE 158 (187)
T ss_pred CChhhhh
Confidence 8886653
|
|
| >COG1444 Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.019 Score=66.32 Aligned_cols=115 Identities=21% Similarity=0.173 Sum_probs=69.3
Q ss_pred cCHHHHHHHHHHHHHccccccCCHHHHHhcc----CeEEEEEECC-eEEEEEEEeee----------------c------
Q 007903 457 TDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVEREG-QIIACAALFPF----------------F------ 509 (585)
Q Consensus 457 ~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i----~~~~Va~~dg-~IVG~~~l~~~----------------~------ 509 (585)
.|-+.+.+++.-+...++-. ++.++..-+ .+++++..++ ++|+.+.+..- +
T Consensus 437 ~~ee~Lr~~~gllV~AHYRn--sP~DL~~L~DaP~h~~~al~~~~~~~va~~qva~EG~l~~~~i~~~~~g~r~~GnlIp 514 (758)
T COG1444 437 FDEELLRQVYGLLVSAHYRN--SPNDLRRLLDAPHHHIFALRAPEGKPVAVWQVAEEGGLSDELIDIWLGGRRPRGNLIP 514 (758)
T ss_pred hCHHHHHHHHhHHhhhhccC--CHHHHHHHhcCCCCeeEEEEcCCCceEEEEEeeccCCCcHHHHHHHhcCCCCCCcccH
Confidence 34344444443344444422 344444333 6788887776 77777766310 0
Q ss_pred -------------cCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHH-HcCCcccCccceecccccccccCeeecC
Q 007903 510 -------------KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETR-YDHISTNGFPFLRGRTHSYYRLKFNCSS 575 (585)
Q Consensus 510 -------------~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~-~~gi~~~g~~~~~~~a~~YYrlGF~~~~ 575 (585)
.-....|.+|+|||++|++|||++|++.++ ++++ ....-..+|.....=.++|-|.||.+.+
T Consensus 515 ~~l~~~~~~~~fa~l~G~RIvRIAvhPe~q~~GiGsrlL~~l~----~~a~~~~DwlgvsFG~t~~L~rFW~rnGF~pVh 590 (758)
T COG1444 515 DLLAKHHRDPEFAKLVGWRIVRIAVHPELQRMGIGSRLLALLI----EEARKGLDWLGVSFGYTEELLRFWLRNGFVPVH 590 (758)
T ss_pred HHHHHhhcchhhcccceeeEEEEEeCHHHHhcCHHHHHHHHHH----HHHhcCCCEEeeccCCCHHHHHHHHHcCeEEEE
Confidence 002347889999999999999999999999 7775 2333334444322333445589999875
Q ss_pred cc
Q 007903 576 KS 577 (585)
Q Consensus 576 ~~ 577 (585)
-+
T Consensus 591 ls 592 (758)
T COG1444 591 LS 592 (758)
T ss_pred ec
Confidence 43
|
|
| >KOG4144 consensus Arylalkylamine N-acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.0045 Score=57.51 Aligned_cols=119 Identities=14% Similarity=0.082 Sum_probs=70.6
Q ss_pred cccccccccCHHHHHHHHHHHHHcccccc--CCHHHHHhcc--------------CeEEEEEECCeEEEEEEEeeec---
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVR--RTDEELLKAL--------------DSFYVVEREGQIIACAALFPFF--- 509 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~--~~~e~l~~~i--------------~~~~Va~~dg~IVG~~~l~~~~--- 509 (585)
..||+..++|++++..| +..++... .+.+-+...+ ..+. -...+.+||++.-....
T Consensus 12 ~~irp~i~e~~q~~~~L----ea~~FPe~erasfeii~~r~i~~pevc~glf~~~~h~~-~~~~~tLIghIigs~~~~E~ 86 (190)
T KOG4144|consen 12 PRIRPGIPESCQRRHTL----EASEFPEDERASFEIIRERFISVPEVCPGLFDEIRHFL-TLCEGTLIGHIIGSLWDKER 86 (190)
T ss_pred ccCCCCChHHHHHHhcc----ccccCChhHHHHHHHHHHHHhcchhhcchhhhhHHhhh-hhccccceehhhcccCcchh
Confidence 56999999998888887 55555321 1122222222 1111 11257888887654321
Q ss_pred -----------cCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcc-cCccceecccccccccCeeecCc
Q 007903 510 -----------KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHIST-NGFPFLRGRTHSYYRLKFNCSSK 576 (585)
Q Consensus 510 -----------~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~-~g~~~~~~~a~~YYrlGF~~~~~ 576 (585)
......|+.++|+|+||.+|+|..|+..-+ +..-++-+.. ..+..-..-..+|+++||...+.
T Consensus 87 lt~ESm~kh~s~g~ni~iHsl~Ihpa~rk~g~a~~Ll~~yl----q~l~~q~i~~r~~Li~h~pLvPFYEr~gFk~vgp 161 (190)
T KOG4144|consen 87 LTQESMTKHRSGGHNIHIHSLAIHPAFRKQGRAPILLWRYL----QHLGSQPIVRRAALICHDPLVPFYERFGFKAVGP 161 (190)
T ss_pred hhHHHHhhhhcCCcceeEEEEEecHHHHhcCcchhHHHHHH----HHhhcCccccceeeeecCCccchhHhcCceeecc
Confidence 134578999999999999999999998866 3332222222 22222223344666899987643
|
|
| >COG4552 Eis Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.012 Score=61.61 Aligned_cols=82 Identities=17% Similarity=0.269 Sum_probs=63.2
Q ss_pred CeEEEEEECCeEEEEEEEeeec--c----CCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceec
Q 007903 488 DSFYVVEREGQIIACAALFPFF--K----EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRG 561 (585)
Q Consensus 488 ~~~~Va~~dg~IVG~~~l~~~~--~----~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~ 561 (585)
..++|...+.++++.....++. + -+.+-|..+++.|+|||+|.-++||.+.+ +..++.|+.-. ++..
T Consensus 39 ~n~~vi~~nqkl~s~L~i~~f~~~f~~q~l~t~GIa~Vas~P~~R~~G~~~~Ll~~sL----re~~~kG~p~s---~L~P 111 (389)
T COG4552 39 PNSYVIYMNQKLASRLHIPPFIFWFGNQVLPTAGIAGVASAPTYRRRGALRALLAHSL----REIARKGYPVS---ALHP 111 (389)
T ss_pred CcceEEeehhhhhhcccccchheeeCCeeeeccceEEEEechhhccCcHHHHHHHHHH----HHHHHcCCeeE---Eecc
Confidence 5688889999999887775431 1 24678899999999999999999999999 88888888743 3444
Q ss_pred cccccc-ccCeeecCc
Q 007903 562 RTHSYY-RLKFNCSSK 576 (585)
Q Consensus 562 ~a~~YY-rlGF~~~~~ 576 (585)
....+| |+||+..+-
T Consensus 112 ~s~~iYrKfGye~asn 127 (389)
T COG4552 112 FSGGIYRKFGYEYASN 127 (389)
T ss_pred CchhhHhhccccccce
Confidence 444444 799987754
|
|
| >COG5630 ARG2 Acetylglutamate synthase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.13 Score=54.24 Aligned_cols=133 Identities=5% Similarity=-0.162 Sum_probs=76.5
Q ss_pred eEEEEeCCccCCCCChHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHHHHHHhHHHH
Q 007903 101 TFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRM 180 (585)
Q Consensus 101 ~iVIKlGGs~l~~~~l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~~~~~G~i~~ 180 (585)
.-+.++++-+..++ ..+....+..+.+.++-+++.|||+++-..-+-..|.. ..+| |.+.+..+.+-. ....++.
T Consensus 142 ~~~s~v~~~v~~~~-~~e~t~s~f~~~~v~~t~ivl~~~~~p~i~e~~i~gn~--i~~G-r~~~~h~~~~~~-~~~~~~~ 216 (495)
T COG5630 142 IGNSNFIPIVKPYV-YNEETASEFMTKDVVKFMDCLCQGNIPHIDKFFILNNA--IPSG-RNDNAHVFILSQ-ELEHLSS 216 (495)
T ss_pred ccccceecccCCCc-chhhhHHHHHHHhhhheeeeecCCCCccceeeeecccc--cccc-cccccchhhHHH-HHHHHHH
Confidence 45888888887664 45556667778888999999999988755443344444 4567 787777654211 1122222
Q ss_pred HHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHHcCCCeEEEcCCc
Q 007903 181 MIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLG 260 (585)
Q Consensus 181 ~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL~~G~IPVi~~v~ 260 (585)
.+.+.++ ..+-. -+...+.+..+.. ..|++.++++...| .+..+++.-.+|+.+..+
T Consensus 217 ~l~~~~~---------~~~kR-------~t~s~~~l~~~~~-----~~de~~~~e~~yh~--~nl~l~r~~l~~l~a~a~ 273 (495)
T COG5630 217 SLSHNIS---------TLTKR-------EPRSQNLLHRMEV-----KKDEISSLECEYHD--ENLLLMDKVLSNLAATAT 273 (495)
T ss_pred HHhhccc---------ccccc-------Cccccchhhhhhh-----hhcccccccccccC--hHHHHHHHHhhhcchhhc
Confidence 2222111 11111 1122222333221 34788888888888 455578888888877643
Q ss_pred c
Q 007903 261 Y 261 (585)
Q Consensus 261 ~ 261 (585)
-
T Consensus 274 ~ 274 (495)
T COG5630 274 G 274 (495)
T ss_pred c
Confidence 3
|
|
| >COG3138 AstA Arginine/ornithine N-succinyltransferase beta subunit [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.64 E-value=0.068 Score=54.51 Aligned_cols=88 Identities=17% Similarity=0.275 Sum_probs=57.6
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHHhcc----------------CeEEEEEE--CCeEEEEEEEee---
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----------------DSFYVVER--EGQIIACAALFP--- 507 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i----------------~~~~Va~~--dg~IVG~~~l~~--- 507 (585)
+.+|+++..|++++.+|....-.--..+|.+.+.+...+ ..++|.++ .|+++|++.+.-
T Consensus 2 lvvRP~~~aDl~al~~LA~~sg~G~TsLP~de~~L~~Ri~~se~sf~~~~~~ge~~Y~fVLEDsetG~VvG~saI~a~vG 81 (336)
T COG3138 2 LVVRPVERADLEALMELAVKTGVGLTSLPADEATLRARIERSEKSFQGELPPGEAGYLFVLEDSETGTVVGISAIEAAVG 81 (336)
T ss_pred cccccccccCHHHHHHHHHhcCCCcccCCCCHHHHHHHHHHHHHHHhcccCCCCccEEEEEEecCCceEEeEEEEEEeec
Confidence 458999999999999994322111123444444443322 45677776 699999987631
Q ss_pred ----ec----------------------------cCCceEEeeEEEccCCcCCcHHHHHHH
Q 007903 508 ----FF----------------------------KEKCGEVAAIGVSPECRGQGQGDKLLG 536 (585)
Q Consensus 508 ----~~----------------------------~~~~aeI~~L~V~PeyRGkGIGk~LL~ 536 (585)
++ -..+.|+..++++|+||.-+.|+.|-+
T Consensus 82 l~~PfYsyRv~tlvhaS~~L~v~~~i~~L~L~Nd~TG~SEl~sLFl~pd~Rkg~nG~Llsr 142 (336)
T COG3138 82 LNDPFYSYRVGTLVHASPELNVYNEIPTLFLSNDLTGNSELCTLFLDPDWRKGGNGRLLSK 142 (336)
T ss_pred cCCccceeeeeeeeecCccccccccceeEEEeccCcCchhhhheeecHHHhcccchhhhhh
Confidence 00 124568889999999999888876543
|
|
| >PF13880 Acetyltransf_13: ESCO1/2 acetyl-transferase | Back alignment and domain information |
|---|
Probab=93.84 E-value=0.048 Score=44.48 Aligned_cols=26 Identities=31% Similarity=0.399 Sum_probs=23.8
Q ss_pred eEEeeEEEccCCcCCcHHHHHHHHHH
Q 007903 514 GEVAAIGVSPECRGQGQGDKLLGLCI 539 (585)
Q Consensus 514 aeI~~L~V~PeyRGkGIGk~LL~~~~ 539 (585)
.=|..|.|+|.+|++||+++||+.+.
T Consensus 6 ~GI~RIWV~~~~RR~GIAt~Lld~ar 31 (70)
T PF13880_consen 6 CGISRIWVSPSHRRKGIATRLLDAAR 31 (70)
T ss_pred EEeEEEEeChhhhhhhHHHHHHHHHH
Confidence 34778999999999999999999998
|
|
| >TIGR03694 exosort_acyl putative PEP-CTERM/exosortase system-associated acyltransferase | Back alignment and domain information |
|---|
Probab=93.22 E-value=0.21 Score=50.71 Aligned_cols=86 Identities=16% Similarity=0.103 Sum_probs=54.4
Q ss_pred eEEEEEE-CCeEEEEEEEeee---------c--------------------cCCceEEeeEEEccCCcCC--------c-
Q 007903 489 SFYVVER-EGQIIACAALFPF---------F--------------------KEKCGEVAAIGVSPECRGQ--------G- 529 (585)
Q Consensus 489 ~~~Va~~-dg~IVG~~~l~~~---------~--------------------~~~~aeI~~L~V~PeyRGk--------G- 529 (585)
++++... +|++||++.+.+. + .+...|+.+++|+|+||++ |
T Consensus 57 h~l~~~~~~g~vvG~~RLl~t~~~~p~~~~p~e~~~~~~~~~~~~~~~~~~~~~i~E~SRf~V~~~~r~r~~~~~~~~~~ 136 (241)
T TIGR03694 57 HSLLRHRRTGTFVGCVRLVLPNSSDPDQPFPFEKHCSHSLDGLFLDPRRLPRSRIAEVSRLAVSKDFRRRKGEKLKPSGV 136 (241)
T ss_pred EEEEEECCCCCEEEEEEEeccccccccccccHHHHhccccchhhcCccccCCCceEEeehheECHhHhCCcccccccccc
Confidence 3444433 5899999988642 0 1246799999999999974 2
Q ss_pred -------------------HHHHHHHHHHhhhHHHHHHcCCcccCccceecccccccccCeeecCccc
Q 007903 530 -------------------QGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYYRLKFNCSSKSF 578 (585)
Q Consensus 530 -------------------IGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YYrlGF~~~~~~~ 578 (585)
+...|+..+. +.|..+|++..-......-...+.++||.+..-+-
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~----~~a~~~Gi~~~~~v~~~~l~r~l~r~G~~~~~lG~ 200 (241)
T TIGR03694 137 GVIETEAPFSESERRRFPHIPLGLYLGLI----ALSSANGITHWYAIMEPRLARLLSRFGIQFRQVGP 200 (241)
T ss_pred cccccccccchhhcccCchHHHHHHHHHH----HHHHHCCCcEEEEEeCHHHHHHHHHhCCceEEcCC
Confidence 4566888888 89999999763211111111234467776654433
|
Members of this protein family are restricted to bacterial species with the PEP-CTERM/exosortase system predicted to act in exopolysaccharide-associated protein targeting. PSI-BLAST and CDD reveal relationships to the acyltransferase family that includes N-acyl-L-homoserine lactone synthetase. Several members of this family may be found in a single genome. These proteins likely contribute to chemical modifications in exopolysaccharide and biofilm structural material production. |
| >PF01853 MOZ_SAS: MOZ/SAS family; InterPro: IPR002717 Moz is a monocytic leukemia Zn_finger protein and the SAS protein from Saccharomyces cerevisiae (Baker's yeast) is involved in silencing the Hmr locus | Back alignment and domain information |
|---|
Probab=92.68 E-value=0.39 Score=46.65 Aligned_cols=49 Identities=14% Similarity=0.132 Sum_probs=36.1
Q ss_pred eEEEEEEEeeeccCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCC
Q 007903 498 QIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHI 551 (585)
Q Consensus 498 ~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi 551 (585)
.++||.+=.. .+....-+.+|.|.|.||++|+|+.|++..- +.++..+.
T Consensus 66 h~vGyFSKEk-~s~~~~NLsCIl~lP~yQrkGyG~~LI~fSY----~LSr~e~~ 114 (188)
T PF01853_consen 66 HIVGYFSKEK-ESWDNNNLSCILTLPPYQRKGYGRFLIDFSY----ELSRREGK 114 (188)
T ss_dssp EEEEEEEEES-S-TT-EEESEEEE-GGGTTSSHHHHHHHHHH----HHHHHTTS
T ss_pred eeEEEEEEEe-cccCCeeEeehhhcchhhhcchhhhhhhhHH----HHhhccCc
Confidence 5888876542 2334557899999999999999999999988 66666553
|
These proteins were reported to be homologous to acetyltransferases [] but this similarity is not supported by standard sequence analysis.; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 3TO6_A 1MJA_A 1MJ9_A 3TO7_A 3TO9_A 1MJB_A 1FY7_A 2OZU_A 2RC4_A 2OU2_A .... |
| >COG3818 Predicted acetyltransferase, GNAT superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.48 E-value=0.15 Score=46.33 Aligned_cols=122 Identities=17% Similarity=0.171 Sum_probs=78.4
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHHhccCeEEEEEECCeEEEEEEEee----ec----------cCCce
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFP----FF----------KEKCG 514 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i~~~~Va~~dg~IVG~~~l~~----~~----------~~~~a 514 (585)
..||.....|..++..|.++..-+ +.+...+.+.......|+++.+|.+.|+....- +. -++.-
T Consensus 8 ~~~~D~~apd~aavLaLNNeha~e--lswLe~erL~~l~~eAF~ArR~G~l~afl~tFd~~a~ydSpNFlWFrErYe~F~ 85 (167)
T COG3818 8 ILIRDVRAPDLAAVLALNNEHALE--LSWLELERLYRLYKEAFVARRDGNLAAFLVTFDSSARYDSPNFLWFRERYENFF 85 (167)
T ss_pred eehhhhcCCchhhHHhccchhhhh--ccccCHHHHHHHHHHHHHHhhccchhhheeeccccccCCCCceeehhhhCCceE
Confidence 446666777888888884432211 112244555444444468888888777765421 00 13456
Q ss_pred EEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccce----eccccccc-ccCeeecCc
Q 007903 515 EVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFL----RGRTHSYY-RLKFNCSSK 576 (585)
Q Consensus 515 eI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~----~~~a~~YY-rlGF~~~~~ 576 (585)
+|+++.|....||+|+|++|.+.+. +.|+..|+........ ......|- .+||...++
T Consensus 86 YvDRvVVA~~aRGrG~aRalY~Dlf----~~Ae~agy~~~tCEVn~DppnpasdaFHaalGF~eVG~ 148 (167)
T COG3818 86 YVDRVVVASRARGRGVARALYADLF----SYAELAGYPYLTCEVNLDPPNPASDAFHAALGFHEVGQ 148 (167)
T ss_pred EEEEEEEEecccccchHHHHHHHHH----HHHHhcCCceEEEEecCCCCChHHHHHhhhcCceEccc
Confidence 8999999999999999999999999 8888888765433221 12233354 588887654
|
|
| >PF00765 Autoind_synth: Autoinducer synthetase; InterPro: IPR001690 Bacterial species have many methods of controlling gene expression and cell growth | Back alignment and domain information |
|---|
Probab=89.73 E-value=1.2 Score=43.29 Aligned_cols=85 Identities=16% Similarity=0.135 Sum_probs=56.1
Q ss_pred CeEEEEEECCeEEEEEEEeeec--------------------cCCceEEeeEEEccCCcC------CcHHHHHHHHHHhh
Q 007903 488 DSFYVVEREGQIIACAALFPFF--------------------KEKCGEVAAIGVSPECRG------QGQGDKLLGLCIWP 541 (585)
Q Consensus 488 ~~~~Va~~dg~IVG~~~l~~~~--------------------~~~~aeI~~L~V~PeyRG------kGIGk~LL~~~~~~ 541 (585)
..++++..+|+++|++.+.|.. .+...|+.+++|+|+.++ .-+...|+..+.
T Consensus 45 ~~ylv~~~~g~v~g~~RLlptt~p~ML~~~F~~ll~~~~~p~~~~vwE~SRf~v~~~~~~~~~~~~~~~~~~L~~~~~-- 122 (182)
T PF00765_consen 45 AVYLVALDDGRVVGCARLLPTTGPYMLSDVFPHLLPDGPAPRSPDVWELSRFCVDPDRRRSRAGSRSPVTMELLLGMV-- 122 (182)
T ss_dssp -EEEEEEETTEEEEEEEEEETTS--HHHHCTGGGHTTS---SSTTEEEEEEEEE-HCCCHHCHSCC-THHHHHHHHHH--
T ss_pred CeEEEEEECCEEEEEeeeccCCCcchhhhHHHHHhCCCCCCCCCcceeeeEEEEcccccccccccccHHHHHHHHHHH--
Confidence 4566777889999999997521 145689999999998532 247788999999
Q ss_pred hHHHHHHcCCcccCccceecccccccccCeeecCc
Q 007903 542 LLSETRYDHISTNGFPFLRGRTHSYYRLKFNCSSK 576 (585)
Q Consensus 542 a~~~A~~~gi~~~g~~~~~~~a~~YYrlGF~~~~~ 576 (585)
++|.++|+...-...-..-...|.+.||.+.-.
T Consensus 123 --e~a~~~gi~~~v~V~~~~~~r~l~r~G~~~~~l 155 (182)
T PF00765_consen 123 --EFALSNGIRHIVGVVDPAMERILRRAGWPVRRL 155 (182)
T ss_dssp --HHHHCTT-SEEEEEEEHHHHHHHHHCT-EEEES
T ss_pred --HHHHHCCCCEEEEEEChHHHHHHHHcCCceEEC
Confidence 999999998742221111223466788887643
|
Regulation of gene expression in response to changes in cell density is termed quorum sensing [, ]. Quorum-sensing bacteria produce, release and respond to hormone-like molecules (autoinducers) that accumulate in the external environment as the cell population grows. Once a threshold of these molecules is reached, a signal transduction cascade is triggered that ultimately leads to behavioural changes in the bacterium []. Autoinducers are thus clearly important mediators of molecular communication. Conjugal transfer of Agrobacterium octopine-type Ti plasmids is activated by octopine, a metabolite released from plant tumours []. Octopine causes conjugal donors to secrete a pheromone, Agrobacterium autoinducer (AAI), and exogenous AAI further stimulates conjugation. The putative AAI synthase and an AAI-responsive transcriptional regulator have been found to be encoded by the Ti plasmid traI and traR genes, respectively. TraR and TraI are similar to the LuxR and LuxI regulatory proteins of Vibrio fischeri, and AAI is similar in structure to the diffusable V. fischeri autoinducer, the inducing ligand of LuxR. TraR activates target genes in the presence of AAI and also activates traR and traI themselves, creating two positive-feedback loops. TraR-AAI-mediated activation in wild-type Agrobacterium strains is enhanced by culturing on solid media, suggesting a possible role in cell density sensing []. Production of light by the marine bacterium V. fischeri and by recombinant hosts containing cloned lux genes is controlled by the density of the culture []. Density-dependent regulation of lux gene expression has been shown to require a locus consisting of the luxR and luxI genes. In these and other Gram-negative bacteria, N-(3-oxohexanoyl)-L-homoserine lactone (OHHL) acts as the autoinducer by binding to transcriptional regulatory proteins and activating them []. OHHL and related molecules, such as N-butanoyl- (BHL), N-hexanoyl- (HHL) and N-oxododecanoyl- (PAI) homoserine lactones, are produced by a family of proteins that share a high level of sequence similarity. Proteins which currently members of this family include: luxI from V. fischeri. ahyI and asaI from Aeromonas species, which synthesize BHL and whose targets are ahyR and asaR respectively. carI from Erwinia carotovora. The target of OHHL is carR which activates genes involved in the biosynthesis of carbapenem antibiotics. eagI from Enterobacter agglomerans. The target of OHHL is not yet known. esaI from Erwinia stewartii. expI from Erwinia carotovora. lasI from Pseudomonas aeruginosa, which synthesizes PAI and whose target is lasR which activates the transcription of the elastase gene. rhlI (or vsmI) from P. aeruginosa, which synthesizes BHL and HHL and whose target is rhlR. swrI from Serratia liquefaciens, which synthesizes BHL. yenI from Yersinia enterocolitica. ; GO: 0007165 signal transduction; PDB: 3P2H_A 3P2F_A 1KZF_A 1K4J_A 1RO5_A. |
| >PLN03238 probable histone acetyltransferase MYST; Provisional | Back alignment and domain information |
|---|
Probab=89.66 E-value=0.71 Score=47.60 Aligned_cols=50 Identities=14% Similarity=0.159 Sum_probs=37.3
Q ss_pred CeEEEEEEEeeeccCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCC
Q 007903 497 GQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHI 551 (585)
Q Consensus 497 g~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi 551 (585)
-.+|||.+=... .....-+.+|-|.|.||++|+|+.|++..- +.++..|.
T Consensus 140 ~h~vGYFSKEK~-s~~~nNLaCIltLPpyQrkGyG~~LI~fSY----eLSr~Eg~ 189 (290)
T PLN03238 140 SHIVGYFSKEKV-SAEDYNLACILTLPPYQRKGYGKFLISFAY----ELSKREGK 189 (290)
T ss_pred cEEEEEeceecc-ccCCCcEEEEEecChhhhccHhHhHHHHHh----HHhhccCC
Confidence 368888654421 222345889999999999999999999998 66666653
|
|
| >PRK13834 putative autoinducer synthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=87.90 E-value=2 Score=42.51 Aligned_cols=84 Identities=12% Similarity=0.072 Sum_probs=53.7
Q ss_pred CeEEEEE-ECCeEEEEEEEeeec--------------------cCCceEEeeEEEccCCcCC---c----HHHHHHHHHH
Q 007903 488 DSFYVVE-REGQIIACAALFPFF--------------------KEKCGEVAAIGVSPECRGQ---G----QGDKLLGLCI 539 (585)
Q Consensus 488 ~~~~Va~-~dg~IVG~~~l~~~~--------------------~~~~aeI~~L~V~PeyRGk---G----IGk~LL~~~~ 539 (585)
..+++.. .+|+++|++.+.+.. .++..|+.+++|+|+++.. + +...|+..+.
T Consensus 53 ~~yll~~~~~g~vvG~~RLlptt~p~ml~~~fp~l~~~~~~~~~~~v~E~SRf~V~~~~~~~~~~~~~~~~~~~L~~~~~ 132 (207)
T PRK13834 53 PTYILAISDSGRVAGCARLLPAIGPTMLAQVFPQLLPAGRLNAHPAMIESSRFCVDTALAEGRGGGQLHEATLTMFAGII 132 (207)
T ss_pred CEEEEEEeCCCeEEEEEecccCCCcchhhhhcHHhcCCCCCCCCCCEEEEeeeEEcccccccccccccCHHHHHHHHHHH
Confidence 3455544 568999999885320 2457899999999986422 2 5677888888
Q ss_pred hhhHHHHHHcCCcccCccceecccccccccCeeecC
Q 007903 540 WPLLSETRYDHISTNGFPFLRGRTHSYYRLKFNCSS 575 (585)
Q Consensus 540 ~~a~~~A~~~gi~~~g~~~~~~~a~~YYrlGF~~~~ 575 (585)
+++..+|+...-......-...|.++||.+..
T Consensus 133 ----~~a~~~Gi~~~~~v~~~~~~r~l~r~G~~~~~ 164 (207)
T PRK13834 133 ----EWSMANGYTEIVTATDLRFERILARAGWPMQR 164 (207)
T ss_pred ----HHHHHCCCCEEEEEECHHHHHHHHHcCCCeEE
Confidence 89999999864211111111235567777653
|
|
| >PF04377 ATE_C: Arginine-tRNA-protein transferase, C terminus; InterPro: IPR007472 Arginine-tRNA-protein transferase catalyses the post-translational conjugation of arginine to the N terminus of a protein | Back alignment and domain information |
|---|
Probab=86.37 E-value=8.6 Score=35.22 Aligned_cols=79 Identities=16% Similarity=0.157 Sum_probs=52.2
Q ss_pred eEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcc--cCccceecccccc
Q 007903 489 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHIST--NGFPFLRGRTHSY 566 (585)
Q Consensus 489 ~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~--~g~~~~~~~a~~Y 566 (585)
.++-...+|++||.+.+... .+...-|. .+-+|++....+|+-.+=.-+ +.|++.|++- .|++ +.+-..-=
T Consensus 40 ~~~~~~~~~kLiav~v~D~l-~~glSaVY-~fyDPd~~~~SlG~~~iL~eI----~~a~~~~l~y~YLGY~-I~~c~kM~ 112 (128)
T PF04377_consen 40 YHLEYRLDGKLIAVAVVDIL-PDGLSAVY-TFYDPDYSKRSLGTYSILREI----ELARELGLPYYYLGYW-IHGCPKMN 112 (128)
T ss_pred EEEEEEeCCeEEEEEEeecc-cchhhhee-eeeCCCccccCcHHHHHHHHH----HHHHHcCCCEEeeCeE-eCCCCccc
Confidence 34445679999999888743 23333444 345999999999999988888 8899888764 3443 23333334
Q ss_pred cccCeeec
Q 007903 567 YRLKFNCS 574 (585)
Q Consensus 567 YrlGF~~~ 574 (585)
||..|.+.
T Consensus 113 YK~~f~P~ 120 (128)
T PF04377_consen 113 YKARFRPH 120 (128)
T ss_pred chhcCCce
Confidence 45555543
|
In eukaryotes, this functions as part of the N terminus rule pathway of protein degradation by conjugating a destabilising amino acid to the N-terminal aspartate or glutamate of a protein, targeting the protein for ubiquitin-dependent proteolysis. N-terminal cysteine is sometimes modified []. In Saccharomyces cerevisiae, Cys20, 23, 94 and/or 95 are thought to be important for activity []. Of these, only Cys 94 appears to be completely conserved in this family. This entry represents the C-terminal region of the enzyme arginine-tRNA-protein transferase, found in both eukaryotic and prokaryotic enzymes.; GO: 0004057 arginyltransferase activity, 0016598 protein arginylation |
| >PF05301 Mec-17: Touch receptor neuron protein Mec-17; InterPro: IPR007965 Mec-17 is the protein product of one of the 18 genes required for the development and function of the touch receptor neuron for gentle touch | Back alignment and domain information |
|---|
Probab=86.34 E-value=2.4 Score=38.14 Aligned_cols=25 Identities=20% Similarity=0.260 Sum_probs=23.0
Q ss_pred EEeeEEEccCCcCCcHHHHHHHHHH
Q 007903 515 EVAAIGVSPECRGQGQGDKLLGLCI 539 (585)
Q Consensus 515 eI~~L~V~PeyRGkGIGk~LL~~~~ 539 (585)
-|-++||++..|++|+|++|+++++
T Consensus 48 cvLDFyVhes~QR~G~Gk~LF~~ML 72 (120)
T PF05301_consen 48 CVLDFYVHESRQRRGYGKRLFDHML 72 (120)
T ss_pred eeeeEEEEeceeccCchHHHHHHHH
Confidence 4567899999999999999999999
|
Mec-17 is specifically required for maintaining the differentiation of the touch receptor []. This family is conserved to higher eukaryotes.; GO: 0019799 tubulin N-acetyltransferase activity |
| >PF06852 DUF1248: Protein of unknown function (DUF1248); InterPro: IPR009658 This entry represents a conserved region within a number of proteins of unknown function that seem to be specific to Caenorhabditis elegans | Back alignment and domain information |
|---|
Probab=86.33 E-value=1.9 Score=41.90 Aligned_cols=49 Identities=20% Similarity=0.323 Sum_probs=33.6
Q ss_pred EEEEE-CCeEEEEEEEeeec------cCCceEEeeEEEccCCcCCcHHHHHHHHHH
Q 007903 491 YVVER-EGQIIACAALFPFF------KEKCGEVAAIGVSPECRGQGQGDKLLGLCI 539 (585)
Q Consensus 491 ~Va~~-dg~IVG~~~l~~~~------~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~ 539 (585)
+++.. ..++|+...+..+. +...-.+...+++|+|||+|+++.+-+.+.
T Consensus 49 ~~~~KgT~~via~~~~~~~~~l~~~~d~pl~~~G~~w~~p~yRg~~~~kl~~~~~~ 104 (181)
T PF06852_consen 49 LTCLKGTDRVIATVHLIRFDPLNPSPDKPLQFIGFFWIDPEYRGKGIMKLQDDICM 104 (181)
T ss_pred EEEEcCCCcEEEEEEEEEeccCCCCCCCCeEEEeeeeeCCcccCcchHHHHHHHHH
Confidence 33433 35788888775432 234678889999999999999964444443
|
Note that some proteins in the entry contain more than one copy of this region. |
| >PTZ00064 histone acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=86.07 E-value=1.3 Score=48.78 Aligned_cols=50 Identities=16% Similarity=0.073 Sum_probs=37.5
Q ss_pred CeEEEEEEEeeeccCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCC
Q 007903 497 GQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHI 551 (585)
Q Consensus 497 g~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi 551 (585)
-.+|||..=.. ......-+.+|-|.|.||++|+|+.|++..- +.++..|.
T Consensus 369 ~HiVGYFSKEK-~S~~~nNLACILtLPpyQRKGYGklLIdfSY----eLSrrEgk 418 (552)
T PTZ00064 369 CHIVGYFSKEK-VSLLHYNLACILTLPCYQRKGYGKLLVDLSY----KLSLKEGK 418 (552)
T ss_pred cEEEEEecccc-cCcccCceEEEEecchhhhcchhhhhhhhhh----hhhhhcCC
Confidence 37888865432 1223346899999999999999999999998 66666654
|
|
| >COG5628 Predicted acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=86.01 E-value=2 Score=38.62 Aligned_cols=52 Identities=13% Similarity=0.114 Sum_probs=38.1
Q ss_pred CeEEEEEECCeEEEEEEEeeec---cCCceEEeeEEEccCCcCCcHHHHHHHHHH
Q 007903 488 DSFYVVEREGQIIACAALFPFF---KEKCGEVAAIGVSPECRGQGQGDKLLGLCI 539 (585)
Q Consensus 488 ~~~~Va~~dg~IVG~~~l~~~~---~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~ 539 (585)
..-|....+|.+|||+.+--.. .+-.--+..+++...|||+|+|++-...+.
T Consensus 37 ~~~~~~~~~~~~igf~l~L~~~~~~~~iD~~~~efFIi~k~~~~GvGR~aaK~If 91 (143)
T COG5628 37 REAWLFRIGGLPVGFALVLDLAHSPTPIDRAVAEFFIVRKHRRRGVGRAAAKAIF 91 (143)
T ss_pred cceeEEEECCceeeeeeeecccCCCCcccccchheEeeehhhccchhHHHHHHHH
Confidence 4455667789999999874211 111234667899999999999999988887
|
|
| >cd04264 DUF619-NAGS DUF619 domain of various N-acetylglutamate Synthases of the fungal arginine-biosynthetic pathway and urea cycle found in humans and fish | Back alignment and domain information |
|---|
Probab=85.84 E-value=2.2 Score=37.29 Aligned_cols=46 Identities=17% Similarity=0.037 Sum_probs=36.4
Q ss_pred EECCeEEEEEEEeeec-cCCceEEeeEEEccCCcCCcHHHHHHHHHH
Q 007903 494 EREGQIIACAALFPFF-KEKCGEVAAIGVSPECRGQGQGDKLLGLCI 539 (585)
Q Consensus 494 ~~dg~IVG~~~l~~~~-~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~ 539 (585)
..++...|++.+.+.. .+...+|..++|.|..||+|+|+.|++.+.
T Consensus 14 y~~e~y~~~aIvt~~~~~~~~~yLdKfaV~~~~~g~gvad~vf~~i~ 60 (99)
T cd04264 14 YLSEGYNAAAIVTYEGVNNGVPYLDKFAVSSSAQGEGTSDALWRRLR 60 (99)
T ss_pred EEeCCceEEEEEeccCCCCCceEEEEEEEchhhhhcChHHHHHHHHH
Confidence 3455677777775311 137889999999999999999999999998
|
DUF619-NAGS: This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized. |
| >PLN03239 histone acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=85.72 E-value=1.6 Score=46.19 Aligned_cols=49 Identities=12% Similarity=0.152 Sum_probs=36.2
Q ss_pred eEEEEEEEeeeccCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCC
Q 007903 498 QIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHI 551 (585)
Q Consensus 498 ~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi 551 (585)
.+|||.+=.. ......-+.+|-|.|.||++|+|+.|++..- +.++..|.
T Consensus 199 h~vGYFSKEK-~s~~~~NLaCIltLPpyQrkGyG~lLI~fSY----eLSr~Eg~ 247 (351)
T PLN03239 199 HPVGYYSKEK-YSDVGYNLACILTFPAHQRKGYGRFLIAFSY----ELSKKEEK 247 (351)
T ss_pred EEEEEeeecc-cCCCCCceEEEEecChhhhcchhhhhHhhhh----HhhhhcCC
Confidence 6788765432 1122346899999999999999999999988 66666554
|
|
| >PF01233 NMT: Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain; InterPro: IPR022676 Myristoyl-CoA:protein N-myristoyltransferase (2 | Back alignment and domain information |
|---|
Probab=84.60 E-value=5.9 Score=37.59 Aligned_cols=56 Identities=13% Similarity=0.090 Sum_probs=43.4
Q ss_pred ECCeEEEEEEEeeec------cCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCccc
Q 007903 495 REGQIIACAALFPFF------KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTN 554 (585)
Q Consensus 495 ~dg~IVG~~~l~~~~------~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~ 554 (585)
..+++|||+...+.. .-+..+|.-|+||++.|.++++--|++++. .++...|+-+.
T Consensus 86 ~~~kLvgfIsaip~~irv~~~~~~~~eINFLCVhKklRskrlAPvLIkEIt----RRvn~~gI~qA 147 (162)
T PF01233_consen 86 SSKKLVGFISAIPATIRVRDKVIKMVEINFLCVHKKLRSKRLAPVLIKEIT----RRVNLQGIWQA 147 (162)
T ss_dssp TTTEEEEEEEEEEEEEEETTEEEEEEEEEEEEE-GGGTTSSHHHHHHHHHH----HHHHTTT--EE
T ss_pred CCCEEEEEEccceEEEEEeeeEeeeeeEEEEeecHhHhhcCCcHHHHHHHH----HHhhhcCceee
Confidence 369999999886531 124678999999999999999999999999 77777777653
|
3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the N-terminal region. ; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 4A33_A 3H5Z_A 4A2Z_A 2WSA_A .... |
| >KOG4135 consensus Predicted phosphoglucosamine acetyltransferase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=84.09 E-value=0.99 Score=42.05 Aligned_cols=58 Identities=16% Similarity=0.240 Sum_probs=39.2
Q ss_pred ceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHH-cCCcccCccc---eecccccccccCeeec
Q 007903 513 CGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRY-DHISTNGFPF---LRGRTHSYYRLKFNCS 574 (585)
Q Consensus 513 ~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~-~gi~~~g~~~---~~~~a~~YYrlGF~~~ 574 (585)
.+++.-+.-.|..||+|+|++.+..++ .++.. +++.+.-+.. .....+.|.+++|+-.
T Consensus 107 ~gE~EvMIAEP~~RgKG~G~eav~~ml----~y~~s~l~l~Ky~vkig~~nk~sl~lFkk~~f~q~ 168 (185)
T KOG4135|consen 107 TGEVEVMIAEPRGRGKGIGTEAVRAML----AYAYSVLKLDKYEVKIGMDNKPSLRLFKKFLFTQV 168 (185)
T ss_pred eeeEEEEEecccccCCCccHHHHHHHH----HHHHHHhhhheEEEEecCCCchHHHHHHHhhheee
Confidence 578888899999999999999999999 55443 2333211111 2234556778888744
|
|
| >PLN00104 MYST -like histone acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=82.65 E-value=1.5 Score=48.13 Aligned_cols=50 Identities=14% Similarity=0.153 Sum_probs=37.0
Q ss_pred CeEEEEEEEeeeccCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCC
Q 007903 497 GQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHI 551 (585)
Q Consensus 497 g~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi 551 (585)
-.+|||.+=.. ......-+.+|-|.|.||++|+|+.|++..- +..+..|.
T Consensus 291 ~h~vGyFSKEk-~s~~~~NLaCIltlP~yQrkGyG~~LI~~SY----eLSr~eg~ 340 (450)
T PLN00104 291 CHMVGYFSKEK-HSEEDYNLACILTLPPYQRKGYGKFLIAFSY----ELSKREGK 340 (450)
T ss_pred cEEEEEecccc-cCcCCCceEEEEecchhhhcchhheehhhee----hhhhccCC
Confidence 37889865442 1222346899999999999999999999988 55555553
|
|
| >cd04265 DUF619-NAGS-U DUF619 domain of various N-acetylglutamate Synthases (NAGS) of the urea (U) cycle of humans and fish | Back alignment and domain information |
|---|
Probab=82.62 E-value=3.2 Score=36.30 Aligned_cols=44 Identities=18% Similarity=0.129 Sum_probs=33.6
Q ss_pred CCeEEEEEEEeeeccCCceEEeeEEEccCCcCCcHHHHHHHHHH
Q 007903 496 EGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCI 539 (585)
Q Consensus 496 dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~ 539 (585)
++..=|++.+.+...+...+|..++|.|..||+|+|+.|++.+.
T Consensus 17 ~e~y~~~aivt~~~~~~~~yLdKfaV~~~~~g~gv~d~vf~~i~ 60 (99)
T cd04265 17 SEGYNAAAIVTNEEVDGVPYLDKFAVSSSAQGEGTGEALWRRLR 60 (99)
T ss_pred eCCCcEEEEEeccCCCCceEEEEEEEchhhhhcChHHHHHHHHH
Confidence 34444555554211136889999999999999999999999998
|
This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized. |
| >COG3375 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=81.31 E-value=6.9 Score=39.06 Aligned_cols=65 Identities=14% Similarity=0.053 Sum_probs=47.1
Q ss_pred CeEEEEEEC-CeEEEEEEEeeeccCC--ceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCc
Q 007903 488 DSFYVVERE-GQIIACAALFPFFKEK--CGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGF 556 (585)
Q Consensus 488 ~~~~Va~~d-g~IVG~~~l~~~~~~~--~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~ 556 (585)
..++-+..+ |++||...-+|..... +.+-+.+.|.|++++.|+|-+|=.+=- +++.++|++....
T Consensus 46 GlvlgAf~~dg~lVGls~G~pg~r~g~~y~ySH~~gV~e~~k~sglg~aLK~~Qr----e~a~~~G~tli~W 113 (266)
T COG3375 46 GLVLGAFSADGRLVGLSYGYPGGRGGSLYLYSHMLGVREEVKGSGLGVALKMKQR----ERALSMGYTLIAW 113 (266)
T ss_pred CeEEEEEcCCCcEEEEEeccCCcCCCceeeeeeehhccccccccchhhhhHHHHH----HHHHhcCeeeEEE
Confidence 455656654 5999998877632222 345556899999999999999866655 7899999987543
|
|
| >PF02799 NMT_C: Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain; InterPro: IPR022677 Myristoyl-CoA:protein N-myristoyltransferase (2 | Back alignment and domain information |
|---|
Probab=80.97 E-value=13 Score=36.42 Aligned_cols=97 Identities=16% Similarity=0.223 Sum_probs=56.8
Q ss_pred cccccccccCHHHHHHHHHHHHHccccc-cCCHHHHHhcc------CeEEEEEEC-CeEEEEEEEeeecc-----CCceE
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALV-RRTDEELLKAL------DSFYVVERE-GQIIACAALFPFFK-----EKCGE 515 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~-~~~~e~l~~~i------~~~~Va~~d-g~IVG~~~l~~~~~-----~~~ae 515 (585)
..+|+++++|++++.+|++...+.-.+. ..+.+++.-.+ -..+|.+++ |+|-.+++.+..+. ++...
T Consensus 29 ~glR~m~~~Dv~~v~~Ll~~yl~~f~l~~~fs~eev~Hw~lp~~~Vv~syVve~~~~~ITDf~SFY~Lpstvi~~~k~~~ 108 (190)
T PF02799_consen 29 PGLRPMEEKDVPQVTKLLNKYLKKFDLAPVFSEEEVKHWFLPRKNVVYSYVVEDPDGKITDFFSFYSLPSTVIGNPKHKT 108 (190)
T ss_dssp TTEEE--GGGHHHHHHHHHHHHTTSSEEEE--HHHHHHHHS-BTTTEEEEEEEETTSEEEEEEEEEEEEEEESSSSSSSE
T ss_pred CccccCchhhHHHHHHHHHHHHHhcccccccCHHHHHhhcccCCCeEEEEEEecCCCceeeEEEEeecceeecCCCCccc
Confidence 3489999999999999988776654332 34667766555 235566655 58888888764321 22222
Q ss_pred Eee----EEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcc
Q 007903 516 VAA----IGVSPECRGQGQGDKLLGLCIWPLLSETRYDHIST 553 (585)
Q Consensus 516 I~~----L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~ 553 (585)
|.. .++... ==-++||..++ -.|++.|+..
T Consensus 109 l~aAY~fY~~~~~----~~l~~Lm~DaL----i~Ak~~gfDV 142 (190)
T PF02799_consen 109 LKAAYSFYYVATS----TRLKELMNDAL----ILAKNEGFDV 142 (190)
T ss_dssp EEEEEEEEEEESS----SHHHHHHHHHH----HHHHHTTESE
T ss_pred eeeeeeeeeeecC----CCHHHHHHHHH----HHHHHcCCCE
Confidence 221 233332 12345666666 7888988864
|
3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the C-terminal region.; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 2WUU_A 1IYL_B 1NMT_B 1IYK_A .... |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 585 | ||||
| 2r8v_A | 456 | Native Structure Of N-Acetylglutamate Synthase From | 2e-30 | ||
| 2r8v_A | 456 | Native Structure Of N-Acetylglutamate Synthase From | 7e-21 | ||
| 2r98_A | 456 | Crystal Structure Of N-Acetylglutamate Synthase (Se | 4e-28 | ||
| 2r98_A | 456 | Crystal Structure Of N-Acetylglutamate Synthase (Se | 7e-21 | ||
| 2buf_A | 300 | Arginine Feed-Back Inhibitable Acetylglutamate Kina | 5e-14 | ||
| 3e0k_A | 150 | Crystal Structure Of C-Termianl Domain Of N-Acetylg | 1e-13 | ||
| 2bty_A | 282 | Acetylglutamate Kinase From Thermotoga Maritima Com | 1e-12 | ||
| 2rd5_A | 298 | Structural Basis For The Regulation Of N-Acetylglut | 1e-11 | ||
| 2jj4_A | 321 | The Complex Of Pii And Acetylglutamate Kinase From | 3e-11 | ||
| 3zzf_A | 307 | Crystal Structure Of The Amino Acid Kinase Domain F | 1e-10 | ||
| 3zzi_A | 464 | Crystal Structure Of A Tetrameric Acetylglutamate K | 2e-10 | ||
| 3s6k_A | 467 | Crystal Structure Of Xcnags Length = 467 | 9e-10 | ||
| 2ap9_A | 299 | Crystal Structure Of Acetylglutamate Kinase From My | 2e-07 | ||
| 3l86_A | 279 | The Crystal Structure Of Smu.665 From Streptococcus | 5e-04 |
| >pdb|2R8V|A Chain A, Native Structure Of N-Acetylglutamate Synthase From Neisseria Gonorrhoeae Length = 456 | Back alignment and structure |
|
| >pdb|2R8V|A Chain A, Native Structure Of N-Acetylglutamate Synthase From Neisseria Gonorrhoeae Length = 456 | Back alignment and structure |
|
| >pdb|2BUF|A Chain A, Arginine Feed-Back Inhibitable Acetylglutamate Kinase Length = 300 | Back alignment and structure |
|
| >pdb|3E0K|A Chain A, Crystal Structure Of C-Termianl Domain Of N-Acetylglutamate Synthase From Vibrio Parahaemolyticus Length = 150 | Back alignment and structure |
|
| >pdb|2BTY|A Chain A, Acetylglutamate Kinase From Thermotoga Maritima Complexed With Its Inhibitor Arginine Length = 282 | Back alignment and structure |
|
| >pdb|2RD5|A Chain A, Structural Basis For The Regulation Of N-Acetylglutamate Kinase By Pii In Arabidopsis Thaliana Length = 298 | Back alignment and structure |
|
| >pdb|2JJ4|A Chain A, The Complex Of Pii And Acetylglutamate Kinase From Synechococcus Elongatus Pcc7942 Length = 321 | Back alignment and structure |
|
| >pdb|3ZZF|A Chain A, Crystal Structure Of The Amino Acid Kinase Domain From Saccharomyces Cerevisiae Acetylglutamate Kinase Complexed With Its Substrate N-Acetylglutamate Length = 307 | Back alignment and structure |
|
| >pdb|3ZZI|A Chain A, Crystal Structure Of A Tetrameric Acetylglutamate Kinase From Saccharomyces Cerevisiae Length = 464 | Back alignment and structure |
|
| >pdb|3S6K|A Chain A, Crystal Structure Of Xcnags Length = 467 | Back alignment and structure |
|
| >pdb|2AP9|A Chain A, Crystal Structure Of Acetylglutamate Kinase From Mycobacterium Tuberculosis Cdc1551 Length = 299 | Back alignment and structure |
|
| >pdb|3L86|A Chain A, The Crystal Structure Of Smu.665 From Streptococcus Mutans Ua159 Length = 279 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3d2m_A Putative acetylglutamate synthase; protein-COA-Glu ternary complex, transferase; HET: COA GLU; 2.21A {Neisseria gonorrhoeae} PDB: 2r8v_A* 3b8g_A* 2r98_A* 3d2p_A* Length = 456 | Back alignment and structure |
|---|
Score = 254 bits (650), Expect = 2e-78
Identities = 82/251 (32%), Positives = 121/251 (48%), Gaps = 11/251 (4%)
Query: 69 GNVEETYNPVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHH 128
G V + + FV FREA PY+ RG T V I G ++ L+ + DI L
Sbjct: 13 GLVPRGSHMNAPDSFVAHFREAAPYIRQMRGTTLVAGIDGRLLEGGTLNKLAADIGLLSQ 72
Query: 129 LGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSP 188
LGIR VL+ G + +D+L + +G Y R+TD SL A + AG +R EA L
Sbjct: 73 LGIRLVLIHGAYHFLDRLAAAQGRTPHYCRGLRVTDETSLGQAQQFAGTVRSRFEAALC- 131
Query: 189 GPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERL 248
+ V + SGNFL A+ GV+DG D G ++K D +R +L
Sbjct: 132 -------GSVSGFA--RAPSVPLVSGNFLTARPIGVIDGTDMEYAGVIRKTDTAALRFQL 182
Query: 249 DGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP-ILDESGHLIRFL 307
D G +V + LG+S G+ N + + A + A++++A+KL+ + I G L L
Sbjct: 183 DAGNIVWMPPLGHSYGGKTFNLDMVQAAASVAVSLQAEKLVYLTLSDGISRPDGTLAETL 242
Query: 308 TLQEADSLIRQ 318
+ QEA SL
Sbjct: 243 SAQEAQSLAEH 253
|
| >3d2m_A Putative acetylglutamate synthase; protein-COA-Glu ternary complex, transferase; HET: COA GLU; 2.21A {Neisseria gonorrhoeae} PDB: 2r8v_A* 3b8g_A* 2r98_A* 3d2p_A* Length = 456 | Back alignment and structure |
|---|
Score = 180 bits (460), Expect = 6e-51
Identities = 51/136 (37%), Positives = 78/136 (57%)
Query: 404 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIK 463
+++A GV RV +L+G G LL ELF R+G+GT +A + + R A D+ I
Sbjct: 262 ISSAVAALEGGVHRVQILNGAADGSLLQELFTRNGIGTSIAKEAFVSIRQAHSGDIPHIA 321
Query: 464 QIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSP 523
+I+PL E G L+ R+ E L + F ++E +G + CAAL F + CGE+A + VSP
Sbjct: 322 ALIRPLEEQGILLHRSREYLENHISEFSILEHDGNLYGCAALKTFAEADCGEIACLAVSP 381
Query: 524 ECRGQGQGDKLLGLCI 539
+ + G G++LL I
Sbjct: 382 QAQDGGYGERLLAHII 397
|
| >2v5h_A Acetylglutamate kinase; amino-acid biosynthesis, transcription regulation, transfera cyanobacteria, transcription; HET: NLG; 2.75A {Synechococcus elongatus} PDB: 2jj4_A* Length = 321 | Back alignment and structure |
|---|
Score = 119 bits (300), Expect = 7e-30
Identities = 68/271 (25%), Positives = 115/271 (42%), Gaps = 22/271 (8%)
Query: 54 ERNLSKCKVFSEAMGGNVEETYNPVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSS 113
+ G ++ + V+ EA PYL G T VV G +
Sbjct: 4 SHHHHHHSSGLVPRGSHMSSEFIEAGAADRVRILSEALPYLQQFAGRTVVVKYGGAAMKQ 63
Query: 114 PYL-DPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAM 172
L + +++DI FL +G+R V+V G +I+ L G E ++ R+TD++ M
Sbjct: 64 EELKEAVMRDIVFLACVGMRPVVVHGGGPEINAWLGRVGIEPQFHNGLRVTDAD----TM 119
Query: 173 EAAGGIRMMIEAKLSPGPPICN-IRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYG 231
E M++ +++ I + I G + VG G + A+ D G
Sbjct: 120 EVV---EMVLVGRVNKD--IVSRINTTGGRA----VGFCGTDGRLVLARPH---DQEGIG 167
Query: 232 ATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICI 291
GEV V+ + L+ G + ++S++ +G+ N N VA A A+ A+KLI +
Sbjct: 168 FVGEVNSVNSEVIEPLLERGYIPVISSVAADENGQSFNINADTVAGEIAAALNAEKLILL 227
Query: 292 IDGP-ILDE---SGHLIRFLTLQEADSLIRQ 318
D IL++ LI L + ++ LI Q
Sbjct: 228 TDTRGILEDPKRPESLIPRLNIPQSRELIAQ 258
|
| >2v5h_A Acetylglutamate kinase; amino-acid biosynthesis, transcription regulation, transfera cyanobacteria, transcription; HET: NLG; 2.75A {Synechococcus elongatus} PDB: 2jj4_A* Length = 321 | Back alignment and structure |
|---|
Score = 47.6 bits (114), Expect = 5e-06
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 412 RRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYE 449
+GV+ H++DG I LLLE+F G+GTM+ Y
Sbjct: 277 AQGVRAAHIIDGRIPHALLLEIFTDAGIGTMIVGSGYH 314
|
| >2rd5_A Acetylglutamate kinase-like protein; protein-protein complex, regulation of arginine biosynthesis nitrogen metabolism, kinase, transferase, transcription; HET: ARG ADP NLG ATP; 2.51A {Arabidopsis thaliana} Length = 298 | Back alignment and structure |
|---|
Score = 116 bits (294), Expect = 2e-29
Identities = 63/238 (26%), Positives = 112/238 (47%), Gaps = 21/238 (8%)
Query: 89 EAWPYLWAHRGGTFVVIISGEIVSSPYL-DPILKDIAFLHHLGIRFVLVPGTHVQIDKLL 147
E+ P++ RG T VV G ++SP L ++ D+ L +G+R +LV G I++ L
Sbjct: 26 ESLPFIQKFRGKTIVVKYGGAAMTSPELKSSVVSDLVLLACVGLRPILVHGGGPDINRYL 85
Query: 148 SERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICN-IRRHGDSSRWHE 206
+ A++ R+TD+ ME M++ K++ + + I G ++
Sbjct: 86 KQLNIPAEFRDGLRVTDAT----TMEIV---SMVLVGKVNKN--LVSLINAAGATA---- 132
Query: 207 VGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGE 266
VG+S G L A+ + G GEV +VD + +R +D G + +++++ SG+
Sbjct: 133 VGLSGHDGRLLTARPVP--NSAQLGFVGEVARVDPSVLRPLVDYGYIPVIASVAADDSGQ 190
Query: 267 VLNCNTYEVATACALAIEADKLICIIDGP-ILDE---SGHLIRFLTLQEADSLIRQRV 320
N N VA A A+ A+KLI + D IL+ LI+ + ++ +I
Sbjct: 191 AYNINADTVAGELAAALGAEKLILLTDVAGILENKEDPSSLIKEIDIKGVKKMIEDGK 248
|
| >2rd5_A Acetylglutamate kinase-like protein; protein-protein complex, regulation of arginine biosynthesis nitrogen metabolism, kinase, transferase, transcription; HET: ARG ADP NLG ATP; 2.51A {Arabidopsis thaliana} Length = 298 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 2e-05
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 412 RRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 443
+GV+ ++DG LL E+ +G GTM+
Sbjct: 265 AQGVKTASIIDGRRQHSLLHEIMSDEGAGTMI 296
|
| >2ap9_A NAG kinase, acetylglutamate kinase, AGK; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.80A {Mycobacterium tuberculosis} SCOP: c.73.1.2 Length = 299 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 3e-29
Identities = 62/237 (26%), Positives = 101/237 (42%), Gaps = 22/237 (9%)
Query: 89 EAWPYLWAHRGGTFVVIISGEIVSSPYL-DPILKDIAFLHHLGIRFVLVPGTHVQIDKLL 147
EA P+L G VV G ++ L D+AFL + GI V+V G QI +L
Sbjct: 15 EALPWLKQLHGKVVVVKYGGNAMTDDTLRRAFAADMAFLRNCGIHPVVVHGGGPQITAML 74
Query: 148 SERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICN-IRRHGDSSRWHE 206
G E + G +R+T E ++ A RM++ ++ + N I HG +
Sbjct: 75 RRLGIEGDFKGGFRVTTPE----VLDVA---RMVLFGQVGRE--LVNLINAHGPYA---- 121
Query: 207 VGVSVASGNFLAAKRKGVV---DGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSS 263
VG++ A R+ V D G G+V +V+ M + + G + ++S L +
Sbjct: 122 VGITGEDAQLFTAVRRSVTVDGVATDIGLVGDVDQVNTAAMLDLVAAGRIPVVSTLAPDA 181
Query: 264 SGEVLNCNTYEVATACALAIEADKLICIIDGP-ILD---ESGHLIRFLTLQEADSLI 316
G V N N A A A A+ A+KL+ + D + + L+ + L+
Sbjct: 182 DGVVHNINADTAAAAVAEALGAEKLLMLTDIDGLYTRWPDRDSLVSEIDTGTLAQLL 238
|
| >2ap9_A NAG kinase, acetylglutamate kinase, AGK; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.80A {Mycobacterium tuberculosis} SCOP: c.73.1.2 Length = 299 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 1e-05
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 412 RRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446
GV H++DG + +L+ELF G GT V
Sbjct: 257 IGGVPSAHIIDGRVTHCVLVELFTDAGTGTKVVRG 291
|
| >2bty_A Acetylglutamate kinase; N-acetyl-L-glutamate kinase, amino acid kinase, phosphoryl group transfer, arginine metabolism, transferase; HET: ARG NLG; 2.75A {Thermotoga maritima} SCOP: c.73.1.2 Length = 282 | Back alignment and structure |
|---|
Score = 114 bits (289), Expect = 8e-29
Identities = 61/233 (26%), Positives = 106/233 (45%), Gaps = 19/233 (8%)
Query: 89 EAWPYLWAHRGGTFVVIISGEIVSSPYL-DPILKDIAFLHHLGIRFVLVPGTHVQIDKLL 147
EA PY+ G TFV+ G + ++DI L + GI+ ++V G I +++
Sbjct: 11 EALPYIKEFYGKTFVIKFGGSAMKQENAKKAFIQDIILLKYTGIKPIIVHGGGPAISQMM 70
Query: 148 SERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICN-IRRHGDSSRWHE 206
+ G E + +R+TD + ME M++ K++ I + HG +
Sbjct: 71 KDLGIEPVFKNGHRVTDEK----TMEIV---EMVLVGKINKE--IVMNLNLHGGRA---- 117
Query: 207 VGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGE 266
VG+ + A+++ D G G+VKKV+ + ++ + +++ +G G
Sbjct: 118 VGICGKDSKLIVAEKET--KHGDIGYVGKVKKVNPEILHALIENDYIPVIAPVGIGEDGH 175
Query: 267 VLNCNTYEVATACALAIEADKLICIIDGP-ILDESGHLIRFLTLQEADSLIRQ 318
N N A A ++ A+KLI + D +L + G LI LT EA+ LIR
Sbjct: 176 SYNINADTAAAEIAKSLMAEKLILLTDVDGVLKD-GKLISTLTPDEAEELIRD 227
|
| >2bty_A Acetylglutamate kinase; N-acetyl-L-glutamate kinase, amino acid kinase, phosphoryl group transfer, arginine metabolism, transferase; HET: ARG NLG; 2.75A {Thermotoga maritima} SCOP: c.73.1.2 Length = 282 | Back alignment and structure |
|---|
Score = 46.3 bits (111), Expect = 1e-05
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 412 RRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446
R GV VH+++G + +LLE+F R G+GTM+
Sbjct: 246 RGGVGAVHIINGGLEHAILLEIFSRKGIGTMIKEL 280
|
| >3e0k_A Amino-acid acetyltransferase; N-acetylglutamate synthase, structu genomics, PSI-2, protein structure initiative; HET: MSE; 2.52A {Vibrio parahaemolyticus} Length = 150 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 9e-28
Identities = 35/92 (38%), Positives = 56/92 (60%)
Query: 448 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFP 507
E R A + D+ GI ++I PL E G LVRR+ E+L + + F ++E++G II CAAL+P
Sbjct: 3 AEQVRQAGIDDIGGILELIHPLEEQGILVRRSREQLEQEIGKFTIIEKDGLIIGCAALYP 62
Query: 508 FFKEKCGEVAAIGVSPECRGQGQGDKLLGLCI 539
+ +E+ E+A + + P+ R +G LL
Sbjct: 63 YSEERKAEMACVAIHPDYRDGNRGLLLLNYMK 94
|
| >2buf_A Acetylglutamate kinase; acetyglutamate kinase, ADP, arginine biosynthesis, FEED-BACK inhibition, hexamer, transferase; HET: NLG ADP; 2.95A {Pseudomonas aeruginosa} SCOP: c.73.1.2 Length = 300 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 3e-27
Identities = 63/242 (26%), Positives = 114/242 (47%), Gaps = 25/242 (10%)
Query: 89 EAWPYLWAHRGGTFVVIISGEIVSSPYL-DPILKDIAFLHHLGIRFVLVPGTHVQIDKLL 147
EA PY+ G T V+ G + S L +D+ + +GI V+V G QI LL
Sbjct: 16 EALPYIRRFVGKTLVIKYGGNAMESEELKAGFARDVVLMKAVGINPVVVHGGGPQIGDLL 75
Query: 148 SERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICN-IRRHGDSSRWHE 206
E+ ++ R+TD+ M+ M++ +++ I N I RHG S+
Sbjct: 76 KRLSIESHFIDGMRVTDAA----TMDVV---EMVLGGQVNKD--IVNLINRHGGSA---- 122
Query: 207 VGVSVASGNFLAAKRKGVV---------DGVDYGATGEVKKVDVTRMRERLDGGCLVILS 257
+G++ + AK+ V + +D G GEV V+V + + G + +++
Sbjct: 123 IGLTGKDAELIRAKKLTVTRQTPEMTKPEIIDIGHVGEVTGVNVGLLNMLVKGDFIPVIA 182
Query: 258 NLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP-ILDESGHLIRFLTLQEADSLI 316
+G S+GE N N VA A A++A+KL+ + + ++D+ G ++ L+ ++ + LI
Sbjct: 183 PIGVGSNGESYNINADLVAGKVAEALKAEKLMLLTNIAGLMDKQGQVLTGLSTEQVNELI 242
Query: 317 RQ 318
Sbjct: 243 AD 244
|
| >2buf_A Acetylglutamate kinase; acetyglutamate kinase, ADP, arginine biosynthesis, FEED-BACK inhibition, hexamer, transferase; HET: NLG ADP; 2.95A {Pseudomonas aeruginosa} SCOP: c.73.1.2 Length = 300 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 3e-05
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 412 RRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446
+ GV H++DG + +LLE+F G+GT++++
Sbjct: 263 QGGVTSAHIIDGRVPNAVLLEIFTDSGVGTLISNR 297
|
| >3s6k_A Acetylglutamate kinase; synthase, transferase; 2.80A {Xanthomonas campestris PV} Length = 467 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 1e-25
Identities = 55/242 (22%), Positives = 105/242 (43%), Gaps = 28/242 (11%)
Query: 84 VKWFREAWPYL----WAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGT 139
+ +E YL VV + G ++ L+ + ++FL +G+ +++ G
Sbjct: 42 MASAKEISQYLKRFSQLDAKRFAVVKVGGAVLRDD-LEALTSSLSFLQEVGLTPIVLHGA 100
Query: 140 HVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICNIRRH 198
Q+D LS G E + + R+T +LA ++EA ++++
Sbjct: 101 GPQLDAELSAAGIEKQTVNGLRVTSPHALAIVRKVFQASNLKLVEA----------LQQN 150
Query: 199 GDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSN 258
G + ++ G A+ ++ YG GEVK V++ + L G + ++++
Sbjct: 151 GARA----TSIT---GGVFEAEY---LNRDTYGLVGEVKAVNLAPIEASLQAGSIPVITS 200
Query: 259 LGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP-ILDESGHLIRFLTL-QEADSLI 316
LG + SG++LN N A ++ K+I + +LD G LI + L E D L+
Sbjct: 201 LGETPSGQILNVNADFAANELVQELQPYKIIFLTGTGGLLDAEGKLIDSINLSTEYDHLM 260
Query: 317 RQ 318
+Q
Sbjct: 261 QQ 262
|
| >3s6g_A N-acetylglutamate kinase / N-acetylglutamate SYNT; synthase, transferase; HET: COA; 2.67A {Maricaulis maris} PDB: 3s7y_A 3s6h_A* Length = 460 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 2e-24
Identities = 53/267 (19%), Positives = 101/267 (37%), Gaps = 35/267 (13%)
Query: 88 REAWPYLWAHRGGT---FVVI-ISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQI 143
+E YL G F VI + G ++ L + +AFL +G+ V+V G Q+
Sbjct: 43 KEIREYLHRFSGIDQERFAVIKVGGAVIQDD-LPGLASALAFLQTVGLTPVVVHGGGPQL 101
Query: 144 DKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSR 203
D L + + R+T E++ + + + IR G +
Sbjct: 102 DAALEAADIPTERVDGLRVTRDEAMPIIRDTLTQANLALVDA---------IRDAGGRA- 151
Query: 204 WHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSS 263
V G F A +VD G GE + + + + G IL+ LG +
Sbjct: 152 ---AAVP--RGVFEA----DIVDADKLGRVGEPRHIHLDLVGSAARAGQAAILACLGETP 202
Query: 264 SGEVLNCNTYEVATACALAIEADKLICIIDGP-ILDESGHLIRFLTL-QEADSLIRQ--- 318
G ++N N A A++ K++ + +LDE G ++ + L + L++
Sbjct: 203 DGTLVNINADVAVRALVHALQPYKVVFLTGTGGLLDEDGDILSSINLATDFGDLMQADWV 262
Query: 319 ------RVKQSEIAANYVKAVAEEDIT 339
++++ + + + + IT
Sbjct: 263 NGGMRLKLEEIKRLLDDLPLSSSVSIT 289
|
| >4ab7_A Protein Arg5,6, mitochondrial; transferase, arginine biosynthesis, amino acid kinase domain GCN5-related acetyltransferase, GNAT; HET: NLG; 3.25A {Saccharomyces cerevisiae} PDB: 3zzi_A* Length = 464 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 5e-23
Identities = 59/242 (24%), Positives = 104/242 (42%), Gaps = 27/242 (11%)
Query: 84 VKWFREAWPYL----WAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGT 139
+ RE YL + V+ + G I+S L + +AFL+H+G+ +++ GT
Sbjct: 29 ISTKREVEQYLKYFTSVSQQQFAVIKVGGAIISDN-LHELASCLAFLYHVGLYPIVLHGT 87
Query: 140 HVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHG 199
Q++ L +G E Y+ RITD ++A + + + + + G
Sbjct: 88 GPQVNGRLEAQGIEPDYIDGIRITDEHTMAVVRKCFLEQNLKLVTA---------LEQLG 138
Query: 200 DSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL 259
+ ++ SG F A +D Y G +K V + + G L IL++L
Sbjct: 139 VRA----RPIT--SGVFTADY----LDKDKYKLVGNIKSVTKEPIEASIKAGALPILTSL 188
Query: 260 GYSSSGEVLNCNTYEVATACALAIEADKLICI--IDGPILDESGHLIRFLTL-QEADSLI 316
++SG++LN N A A E K++ + G I +G I + L +E D L+
Sbjct: 189 AETASGQMLNVNADVAAGELARVFEPLKIVYLNEKGGIINGSTGEKISMINLDEEYDDLM 248
Query: 317 RQ 318
+Q
Sbjct: 249 KQ 250
|
| >4ab7_A Protein Arg5,6, mitochondrial; transferase, arginine biosynthesis, amino acid kinase domain GCN5-related acetyltransferase, GNAT; HET: NLG; 3.25A {Saccharomyces cerevisiae} PDB: 3zzi_A* Length = 464 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 7e-04
Identities = 18/130 (13%), Positives = 33/130 (25%), Gaps = 15/130 (11%)
Query: 412 RRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV--ASDLYEGTRTAKVTDLSGIKQIIQPL 469
+ + + L ELF G GTM+ L + + + +++ +Q
Sbjct: 269 DYLPRSSSVAIINVQ-DLQKELFTDSGAGTMIRRGYKLVKRSSIGEFPSADALRKALQRD 327
Query: 470 VES---GALVRRTDEELLKALDSFYVVE--REGQIIACAALFPFFKEKCGEVAAIGVSPE 524
V L + Y E I+ P + S
Sbjct: 328 AGISSGKESVASYLRYLENSDFVSYADEPLEAVAIVKKDTNVPT-------LDKFVCSDA 380
Query: 525 CRGQGQGDKL 534
D +
Sbjct: 381 AWLNNVTDNV 390
|
| >3l86_A Acetylglutamate kinase; ARGB, amino-acid biosynthesis, arginine biosynthesi binding, nucleotide-binding, transferase; HET: ADP NLG; 2.06A {Streptococcus mutans} Length = 279 | Back alignment and structure |
|---|
Score = 96.8 bits (242), Expect = 2e-22
Identities = 54/239 (22%), Positives = 91/239 (38%), Gaps = 30/239 (12%)
Query: 89 EAWPYLWAHRGGTFVVIISGEIVSSPYLDPILK-----DIAFLHHLGIRFVLVPGTHVQI 143
V+ I G L I G + V+V G I
Sbjct: 26 GGQQMGRGSMKDIIVIKIGGVA------SQQLSGDFLSQIKNWQDAGKQLVIVHGGGFAI 79
Query: 144 DKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICN-IRRHGDSS 202
+KL+ E K + R+T + M + + + +R+ G S
Sbjct: 80 NKLMEENQVPVKKINGLRVTSKDD----MVLV---SHALLDLVGKN--LQEKLRQAGVSC 130
Query: 203 RWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYS 262
+ + +AA D YG G+V ++ + E L+ + IL++LGYS
Sbjct: 131 ----QQLKSDIKHVVAADYL---DKDTYGYVGDVTHINKRVIEEFLENRQIPILASLGYS 183
Query: 263 SSGEVLNCNTYEVATACALAIEADKLICIIDGP-ILDESGHLIRFLTLQEADSLIRQRV 320
G++LN N +ATA A+A+ ADKLI + + +L+ G ++ +T + I V
Sbjct: 184 KEGDMLNINADYLATAVAVALAADKLILMTNVKGVLEN-GAVLEKITSHQVQEKIDTAV 241
|
| >3zzh_A Acetylglutamate kinase; transferase, arginine biosynthesis; HET: ARG NLG; 2.10A {Saccharomyces cerevisiae} PDB: 3zzg_A 3zzf_A* Length = 307 | Back alignment and structure |
|---|
Score = 97.3 bits (243), Expect = 2e-22
Identities = 61/242 (25%), Positives = 106/242 (43%), Gaps = 27/242 (11%)
Query: 84 VKWFREAWPYL---WAHRGGTFVVI-ISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGT 139
+ RE YL + F VI + G I+S L + +AFL+H+G+ +++ GT
Sbjct: 29 ISTKREVEQYLKYFTSVSQQQFAVIKVGGAIISDN-LHELASCLAFLYHVGLYPIVLHGT 87
Query: 140 HVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHG 199
Q++ L +G E Y+ RITD ++A + + + + + + G
Sbjct: 88 GPQVNGRLEAQGIEPDYIDGIRITDEHTMAVVRKCFLEQNLKL---------VTALEQLG 138
Query: 200 DSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL 259
+ ++ SG F A +D Y G +K V + + G L IL++L
Sbjct: 139 VRA----RPIT--SGVFTADY----LDKDKYKLVGNIKSVTKEPIEASIKAGALPILTSL 188
Query: 260 GYSSSGEVLNCNTYEVATACALAIEADKLICI--IDGPILDESGHLIRFLTL-QEADSLI 316
++SG++LN N A A E K++ + G I +G I + L +E D L+
Sbjct: 189 AETASGQMLNVNADVAAGELARVFEPLKIVYLNEKGGIINGSTGEKISMINLDEEYDDLM 248
Query: 317 RQ 318
+Q
Sbjct: 249 KQ 250
|
| >1gs5_A Acetylglutamate kinase; carbamate kinase, amino acid kinase, arginine biosynthesis, phosphoryl group transfer, protein crystallography; HET: NLG ANP; 1.5A {Escherichia coli} SCOP: c.73.1.2 PDB: 1gsj_A* 1oh9_A* 1oha_A* 1ohb_A* 2wxb_A 2x2w_A* 3t7b_A* Length = 258 | Back alignment and structure |
|---|
Score = 87.5 bits (218), Expect = 1e-19
Identities = 44/203 (21%), Positives = 82/203 (40%), Gaps = 21/203 (10%)
Query: 121 KDIAFLHHLGIR-FVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESL-AAAMEAAGGI 178
+ R V+V G +D+L+ K R+T ++ + AG
Sbjct: 25 SALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTA 84
Query: 179 RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKK 238
+ A ++H ++ VG+ + G+ + + + G G +
Sbjct: 85 NKTLLAW---------AKKHQIAA----VGLFLGDGDSVKVTQLDE----ELGHVGLAQP 127
Query: 239 VDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP-IL 297
+ L+ G L ++S++G + G+++N N + ATA A + A LI + D IL
Sbjct: 128 GSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGA-DLILLSDVSGIL 186
Query: 298 DESGHLIRFLTLQEADSLIRQRV 320
D G I +T +A+ LI Q +
Sbjct: 187 DGKGQRIAEMTAAKAEQLIEQGI 209
|
| >1qst_A TGCN5 histone acetyl transferase; GCN5-related N-acetyltransferase, COA binding protein; HET: EPE; 1.70A {Tetrahymena thermophila} SCOP: d.108.1.1 PDB: 1m1d_A* 1pu9_A* 1pua_A* 5gcn_A* 1qsr_A* 1q2d_A* 1q2c_A* 1qsn_A* Length = 160 | Back alignment and structure |
|---|
Score = 56.0 bits (135), Expect = 2e-09
Identities = 14/80 (17%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
Query: 459 LSGIKQIIQ---PLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGE 515
L +K I P + +V+ + +S +++ + ++I + ++ E
Sbjct: 18 LIDLKNIFSRQLPKMPKEYIVK---LVFDRHHESMVILKNKQKVIGGICFRQYKPQRFAE 74
Query: 516 VAAIGVSPECRGQGQGDKLL 535
VA + V+ + +G G +L+
Sbjct: 75 VAFLAVTANEQVRGYGTRLM 94
|
| >4e0a_A BH1408 protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG, transferase; 1.80A {Bacillus halodurans} PDB: 4f6a_A* Length = 164 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 2e-07
Identities = 15/107 (14%), Positives = 29/107 (27%), Gaps = 23/107 (21%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGAL----------VRRTDEELLKALDS----FYVVEREG 497
R A V D + ++ + E+ A+ V E
Sbjct: 4 REATVQDYEEVARLHTQVHEAHVKERGDIFRSNEPTLNPSRFQAAVQGEKSTVLVFVDER 63
Query: 498 QIIACAALFPFF---------KEKCGEVAAIGVSPECRGQGQGDKLL 535
+ I ++ + K ++ + V RG G G +
Sbjct: 64 EKIGAYSVIHLVQTPLLPTMQQRKTVYISDLCVDETRRGGGIGRLIF 110
|
| >2ae6_A Acetyltransferase, GNAT family; GCN5-related N-acetyltransferase (GNAT), alpha-beta, structu genomics, PSI, protein structure initiative; HET: GOL; 2.19A {Enterococcus faecalis} SCOP: d.108.1.1 Length = 166 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 2e-07
Identities = 18/97 (18%), Positives = 27/97 (27%), Gaps = 9/97 (9%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDS------FYVVEREGQIIACAAL 505
R D + + Q + L A +V Q+ +
Sbjct: 11 RLVAEADWPALHALDQIIWTKKNTPAEIQPLSLAAYQEKMKDETIFVAISGQQLAGFIEV 70
Query: 506 FPFFKEKCGEVAA---IGVSPECRGQGQGDKLLGLCI 539
P + IGVSP+ + QG G LL
Sbjct: 71 HPPTSLAAHQKQWLLSIGVSPDFQDQGIGGSLLSYIK 107
|
| >3i3g_A N-acetyltransferase; malaria, structural genomics, structural genomics consortium, SGC,; 1.86A {Trypanosoma brucei} PDB: 3fb3_A Length = 161 | Back alignment and structure |
|---|
Score = 49.7 bits (119), Expect = 2e-07
Identities = 22/95 (23%), Positives = 37/95 (38%), Gaps = 11/95 (11%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGAL---VRRTDEELLKALDSFYVV---EREGQIIACAAL 505
R + +DLS +++ L E+ L ++ + V + G+I+ A+L
Sbjct: 24 RVLEESDLSSHLELLGHLTEAPPLSGVELANIADMRRRAGIVTKVFCHQPTGRIVGSASL 83
Query: 506 F--PFFKEKCGEVA---AIGVSPECRGQGQGDKLL 535
P F V + V P RG G G L+
Sbjct: 84 MIQPKFTRGGRAVGHIEDVVVDPSYRGAGLGKALI 118
|
| >3c26_A Putative acetyltransferase TA0821; NP_394282.1, A putative acetyltransferase, acetyltransferase family, structural genomics; 2.00A {Thermoplasma acidophilum dsm 1728} Length = 266 | Back alignment and structure |
|---|
Score = 51.3 bits (122), Expect = 3e-07
Identities = 16/103 (15%), Positives = 29/103 (28%), Gaps = 16/103 (15%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---------------DSFYVVERE 496
+D+ IK + G + S YV+
Sbjct: 9 DRGSPSDIDEIKTFTSNTWKVGYYTDLYSKLADTGTMDDYVDKVIERWVNDGSVYVLRVS 68
Query: 497 GQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCI 539
G+ +A + + + + V PE RG G ++ I
Sbjct: 69 GRPVATIHME-KLPDGSVMLGGLRVHPEYRGSRLGMSIMQETI 110
|
| >3mgd_A Predicted acetyltransferase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; HET: ACO; 1.90A {Clostridium acetobutylicum} Length = 157 | Back alignment and structure |
|---|
Score = 49.4 bits (118), Expect = 3e-07
Identities = 22/106 (20%), Positives = 40/106 (37%), Gaps = 18/106 (16%)
Query: 452 RTAKVTDLSGIKQIIQPLV--ESGALVRRTDEELLKALDS--------FYVVEREGQIIA 501
R A + D+S + I + + E D+EL + ++ ++ E QIIA
Sbjct: 5 RKADMKDISLLVSIRKRQLIDEGIEPNIDIDKELTRYFNNKLANNLLVEWIAEENNQIIA 64
Query: 502 CAAL--------FPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCI 539
AA+ + + G + + P RG G +L +
Sbjct: 65 TAAIAFIDFPPTYTNKTGRKGYITNMYTEPTSRGNGIATGMLDRLV 110
|
| >3d8p_A Acetyltransferase of GNAT family; NP_373092.1, structural GE joint center for structural genomics, JCSG, protein structu initiative; 2.20A {Staphylococcus aureus subsp} Length = 163 | Back alignment and structure |
|---|
Score = 49.4 bits (118), Expect = 3e-07
Identities = 15/99 (15%), Positives = 28/99 (28%), Gaps = 12/99 (12%)
Query: 452 RTAKVTDLSGIKQIIQPL--VESGALVRRTDEELLKALDSFY---------VVEREGQII 500
+ + + I + E + R D+ L+ ++ Y + I+
Sbjct: 7 IEYNRSYKEELIEFILSIQKNEFNIKIDRDDQPDLENIEHNYLNSGGQFWLAINNHQNIV 66
Query: 501 ACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCI 539
L + + V R G KLL I
Sbjct: 67 GTIGLIRL-DNNMSALKKMFVDKGYRNLKIGKKLLDKVI 104
|
| >2dxq_A AGR_C_4057P, acetyltransferase; structural genomics, PSI-2, protein struc initiative, midwest center for structural genomics, MCSG; 1.80A {Agrobacterium tumefaciens str} Length = 150 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 4e-07
Identities = 19/95 (20%), Positives = 34/95 (35%), Gaps = 11/95 (11%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGA-LVRRTDEELLKALDS-----FYVVEREGQIIACAAL 505
R A DL G+ ++ Q L S L + + A+ + +V G+ +A A L
Sbjct: 9 RAAGPGDLPGLLELYQVLNPSDPELTTQEAGAVFAAMLAQPGLTIFVATENGKPVATATL 68
Query: 506 FPFFK-----EKCGEVAAIGVSPECRGQGQGDKLL 535
+ + RG+G G ++
Sbjct: 69 LIVPNLTRAARPYAFIENVVTLEARRGRGYGRTVV 103
|
| >3jvn_A Acetyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.61A {Vibrio fischeri} Length = 166 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 5e-07
Identities = 17/105 (16%), Positives = 33/105 (31%), Gaps = 21/105 (20%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVR----------RTDEELLKALDS----FYVVEREG 497
R AK DL + ++ L + ++ + + LD YV E +
Sbjct: 6 RRAKEIDLYCLNSLMYKLHDEHHQQCPDLFKTASEIEEEKSIARYLDDPECMVYVAEMDD 65
Query: 498 QIIACAALFPFF-------KEKCGEVAAIGVSPECRGQGQGDKLL 535
II + + + E R +G ++L+
Sbjct: 66 VIIGFITGHFCELISTVSKLVMMATIDELYIEKEYRREGVAEQLM 110
|
| >2i6c_A Putative acetyltransferase; GNAT family, structural genomic, structur genomics, PSI-2, protein structure initiative; HET: MSE EPE; 1.30A {Pseudomonas aeruginosa} SCOP: d.108.1.1 PDB: 3pgp_A* Length = 160 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 5e-07
Identities = 19/92 (20%), Positives = 34/92 (36%), Gaps = 8/92 (8%)
Query: 452 RTAKVTDLSGIKQIIQPLVE-----SGALVRRTDEELLKALDS---FYVVEREGQIIACA 503
R A+ DL + Q E A+ + +L A+ V +GQ++ A
Sbjct: 6 RPAETGDLETVAGFPQDRDELFYCYPKAIWPFSVAQLAAAIAERRGSTVAVHDGQVLGFA 65
Query: 504 ALFPFFKEKCGEVAAIGVSPECRGQGQGDKLL 535
+ + + + V+P RG G L+
Sbjct: 66 NFYQWQHGDFCALGNMMVAPAARGLGVARYLI 97
|
| >3ec4_A Putative acetyltransferase from the GNAT family; YP_497011.1, joint center for structural genomics; 1.80A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID} Length = 228 | Back alignment and structure |
|---|
Score = 49.4 bits (118), Expect = 8e-07
Identities = 32/177 (18%), Positives = 56/177 (31%), Gaps = 25/177 (14%)
Query: 377 NGLWSS----EQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLL-- 430
+W+S + + L RL+ AAAA G+ + D ++
Sbjct: 10 RPVWNSLGGPQSELDVASG-NLRRLDPAYGPFAAAAPGAEAGLASLLQGDADEIWLVEPE 68
Query: 431 -------LELFKRDGMGTMVASDLYEGT-----RTAKVTDLSGIKQIIQPLVESGALVRR 478
+ + + M+A TD+ + + E G
Sbjct: 69 PVAPPPGTRVIRVAPLLQMIADGPVPSFDDPGIVALGETDVPEMTALAL-ATEPGPWASG 127
Query: 479 TDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLL 535
T FY V +G++ A A EV+ + PE RG+G +L+
Sbjct: 128 TWR-----YGQFYGVRIDGRLAAMAGERMRPAPNLAEVSGVCTWPEYRGRGLAARLI 179
|
| >2q0y_A GCN5-related N-acetyltransferase; YP_295895.1, acetyltransferase (GNAT) family, structural genomics, joint center for ST genomics; HET: MSE; 1.80A {Ralstonia eutropha JMP134} Length = 153 | Back alignment and structure |
|---|
Score = 47.9 bits (114), Expect = 1e-06
Identities = 17/109 (15%), Positives = 32/109 (29%), Gaps = 21/109 (19%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFY------------VVEREGQI 499
R + DL + + + + T + + V+E G
Sbjct: 5 RPLCIDDLELVCRHREAMFREAGRDALTLAAMQDPFRDWLLPRLADGSYFGWVMEEGGAP 64
Query: 500 IACAALFPF---------FKEKCGEVAAIGVSPECRGQGQGDKLLGLCI 539
+A L ++K G + + V P R +G G L+
Sbjct: 65 LAGIGLMVIEWPPHPSHPLQDKRGYILNLYVDPSHRERGIGQALMNRAE 113
|
| >3ddd_A Putative acetyltransferase; NP_142035.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: COA; 2.25A {Pyrococcus horikoshii} Length = 288 | Back alignment and structure |
|---|
Score = 48.8 bits (116), Expect = 2e-06
Identities = 11/92 (11%), Positives = 30/92 (32%), Gaps = 6/92 (6%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGAL--VRRTDEELLKALD--SFYVVEREGQIIACAALFP 507
R A D+ + I ++ E+ + + + + + +F
Sbjct: 23 RYATPDDIEDMVSIFIDAYNFPGPRESVKSSFEISLEVQPDGCLLAFLKDEPVGMGCIFF 82
Query: 508 FFKEKCGEVAAIGVSPECRGQGQGDKLLGLCI 539
+ K + +GV + +G G ++ +
Sbjct: 83 Y--NKQAWIGLMGVKKAYQRRGIGTEVFRRLL 112
|
| >3kkw_A Putative uncharacterized protein; acetyltransferase, GNAT family, structural genomics, PSI, protein structure initiative; 1.41A {Pseudomonas aeruginosa PAO1} Length = 182 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 2e-06
Identities = 18/92 (19%), Positives = 33/92 (35%), Gaps = 8/92 (8%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRR-----TDEELLKALDS---FYVVEREGQIIACA 503
R A+ DL + Q E + + +L A+ V +GQ++ A
Sbjct: 28 RPAETGDLETVAGFPQDRDELFYCYPKAIWPFSVAQLAAAIAERRGSTVAVHDGQVLGFA 87
Query: 504 ALFPFFKEKCGEVAAIGVSPECRGQGQGDKLL 535
+ + + + V+P RG G L+
Sbjct: 88 NFYQWQHGDFCALGNMMVAPAARGLGVARYLI 119
|
| >2we5_A Carbamate kinase 1; arginine catabolism, arginine metabolism, ATP synthesys, open alpha/beta sheet, phosphotransferase, transferase; HET: ADP; 1.39A {Enterococcus faecalis} PDB: 1b7b_A 2we4_A* Length = 310 | Back alignment and structure |
|---|
Score = 48.7 bits (116), Expect = 3e-06
Identities = 25/233 (10%), Positives = 65/233 (27%), Gaps = 40/233 (17%)
Query: 121 KDIAFLHHLGIRFVLVPGTHVQI-DKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIR 179
+ L G R ++ G Q+ + LL ++ +++ + G I
Sbjct: 33 AYLVHLIKQGHRLIVSHGNGPQVGNLLLQQQAADSEKNPAMPLDTCV-----AMTQGSIG 87
Query: 180 MMIEAKLSPGPPICNIRRH------------GDSSRWH---EVGVSVASGNFLAAKRKGV 224
+ L+ I++ D + + +G + A + G
Sbjct: 88 YWLSNALNQELNKAGIKKQVATVLTQVVVDPADEAFKNPTKPIGPFLTEAEAKEAMQAGA 147
Query: 225 V----DGVDY----GATGEVKKVDVTRMRERLDGGCLVILSN------LGYSSSGEVLNC 270
+ G + + + + + + + I +G G
Sbjct: 148 IFKEDAGRGWRKVVPSPKPIDIHEAETINTLIKNDIITISCGGGGIPVVGQELKGVEAVI 207
Query: 271 NTYEVATACALAIEADKLICIIDGP-----ILDESGHLIRFLTLQEADSLIRQ 318
+ + A ++AD L+ + + +T+ E + +
Sbjct: 208 DKDFASEKLAELVDADALVILTGVDYVCINYGKPDEKQLTNVTVAELEEYKQA 260
|
| >1yvk_A Hypothetical protein BSU33890; ALPHS-beta protein, structural genomics, PSI, protein structure initiative; HET: COA; 3.01A {Bacillus subtilis subsp} SCOP: d.108.1.1 Length = 163 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 3e-06
Identities = 9/50 (18%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Query: 490 FYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCI 539
Y ++ L + + E+ I V + +G G +L+ I
Sbjct: 41 CYTAWAGDELAGVYVLLKT-RPQTVEIVNIAVKESLQKKGFGKQLVLDAI 89
|
| >1mk4_A Hypothetical protein YQJY; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: d.108.1.1 Length = 157 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 3e-06
Identities = 12/86 (13%), Positives = 27/86 (31%), Gaps = 2/86 (2%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLK-ALDSFYVVEREGQIIACAALFPFFK 510
RT +D + ++ L + + D+ ++ + F
Sbjct: 5 RTITSSDYEMVTSVLNEWWGGRQLKEKLPRLFFEHFQDTSFITSEHNSMTGFLIGFQSQS 64
Query: 511 E-KCGEVAAIGVSPECRGQGQGDKLL 535
+ + + GV P+ R G +L
Sbjct: 65 DPETAYIHFSGVHPDFRKMQIGKQLY 90
|
| >2i00_A Acetyltransferase, GNAT family; structural genomics, PSI-2, structure initiative, midwest center for structural genomic transferase; 2.30A {Enterococcus faecalis} SCOP: d.106.1.4 d.108.1.10 Length = 406 | Back alignment and structure |
|---|
Score = 48.7 bits (115), Expect = 3e-06
Identities = 26/134 (19%), Positives = 44/134 (32%), Gaps = 24/134 (17%)
Query: 452 RTAKVTDLSGIKQIIQ--------PLVESGALVRRTDEELLKA---LDSFYVVEREGQII 500
+ + + +++ + ESG +R + + L + E Q+I
Sbjct: 13 KPVEEEHIDQFNELLSYVFQVTEADIEESGFENKRAFIKSKQPILELSKVFGWFHENQLI 72
Query: 501 ACAALFPFF------KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTN 554
+ A++P K G V +G PE G L+ L E R D
Sbjct: 73 SQIAIYPCEVNIHGALYKMGGVTGVGTYPEYANHGLMKDLIQT----ALEEMRQDKQW-- 126
Query: 555 GFPFLRGRTHSYYR 568
+L YYR
Sbjct: 127 -ISYLFPYNIPYYR 139
|
| >2fia_A Acetyltransferase; structural genomics, PSI, protein structu initiative, midwest center for structural genomics, MCSG; 2.60A {Enterococcus faecalis} SCOP: d.108.1.1 Length = 162 | Back alignment and structure |
|---|
Score = 46.4 bits (110), Expect = 4e-06
Identities = 17/125 (13%), Positives = 33/125 (26%), Gaps = 21/125 (16%)
Query: 452 RTAKVTDLSGIKQIIQPLVE-----------SGALVRRTDEELLKALDSFYVVEREGQII 500
R A +L I Q + + + +E + Y++ E I
Sbjct: 4 RVADEKELPMILQFLTEVKAYMDVVGITQWTKDYPSQGDIQEDITK-KRLYLLVHEEMIF 62
Query: 501 ACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR 560
+ A ++ + SP +G G L G +
Sbjct: 63 SMATFCMEQEQDFVWLKRFATSPNYIAKGYGSLLFHELE---------KRAVWEGRRKMY 113
Query: 561 GRTHS 565
+T+
Sbjct: 114 AQTNH 118
|
| >2aj6_A Hypothetical protein MW0638; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL; 1.63A {Staphylococcus aureus subsp} SCOP: d.108.1.1 Length = 159 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 5e-06
Identities = 20/99 (20%), Positives = 31/99 (31%), Gaps = 15/99 (15%)
Query: 452 RTAKVTDLSGIKQII---------------QPLVESGALVRRTDEELLKALDSFYVVERE 496
RT + + IKQI + L D Y+ E E
Sbjct: 14 RTLNKDEHNYIKQIANIHETLLSQVESNYKCTKLSIALRYEMICSRLEHTNDKIYIYENE 73
Query: 497 GQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLL 535
GQ+IA ++ + + V P+ R G +L
Sbjct: 74 GQLIAFIWGHFSNEKSMVNIELLYVEPQFRKLGIATQLK 112
|
| >2q7b_A Acetyltransferase, GNAT family; NP_689019.1, structural GEN joint center for structural genomics, JCSG; HET: MSE FLC; 2.00A {Streptococcus agalactiae 2603V} Length = 181 | Back alignment and structure |
|---|
Score = 46.4 bits (110), Expect = 5e-06
Identities = 13/94 (13%), Positives = 36/94 (38%), Gaps = 13/94 (13%)
Query: 458 DLSGIKQIIQPL--VESGALVRRTDEELLKALDSFY--------VVEREGQIIACAALFP 507
L+ + +I +E+ ++ +++ + ++++Y + +++ AL
Sbjct: 31 HLAQLVDLINYCQNIEAKLDIKMAEQDDIFQIENYYQNRKGQFWIALENEKVVGSIALLR 90
Query: 508 FFKEKCGEVAAIGVSPECRGQ--GQGDKLLGLCI 539
+K + P+ RG G KL +
Sbjct: 91 -IDDKTAVLKKFFTYPKYRGNPVRLGRKLFERFM 123
|
| >3dsb_A Putative acetyltransferase; APC60368.2, ST genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE; 1.48A {Clostridium difficile} Length = 157 | Back alignment and structure |
|---|
Score = 46.0 bits (109), Expect = 5e-06
Identities = 18/97 (18%), Positives = 34/97 (35%), Gaps = 13/97 (13%)
Query: 452 RTAKVTDLSGIKQIIQPL---VESGALVRRTDEELLKALDS------FYVVEREGQIIAC 502
R A++ DL I + L E L + +KAL ++V +++A
Sbjct: 10 REARMDDLDTIAKFNYNLAKETEGKELDMDVLTKGVKALLLDERKGKYHVYTVFDKVVAQ 69
Query: 503 AALFP----FFKEKCGEVAAIGVSPECRGQGQGDKLL 535
+ + ++ V E R +G + L
Sbjct: 70 IMYTYEWSDWRNGNFLWIQSVYVDKEYRRKGIFNYLF 106
|
| >1n71_A AAC(6')-II; aminoglycoside 6'-N-acetyltransferase, antibiotic resistance, coenzyme A; HET: COA; 1.80A {Enterococcus faecium} SCOP: d.108.1.1 PDB: 2a4n_A* 1b87_A* Length = 180 | Back alignment and structure |
|---|
Score = 46.3 bits (109), Expect = 5e-06
Identities = 11/79 (13%), Positives = 24/79 (30%), Gaps = 5/79 (6%)
Query: 462 IKQIIQPLVES-----GALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEV 516
Q+ L + G EE++ + +++ P + E+
Sbjct: 14 KDQLSDLLRLTWPEEYGDSSAEEVEEMMNPERIAVAAVDQDELVGFIGAIPQYGITGWEL 73
Query: 517 AAIGVSPECRGQGQGDKLL 535
+ V R G +L+
Sbjct: 74 HPLVVESSRRKNQIGTRLV 92
|
| >1y9k_A IAA acetyltransferase; structural genomics, midwest center for structural genomics bacillus cereus ATCC 14579, PSI; 2.39A {Bacillus cereus atcc 14579} SCOP: d.108.1.1 Length = 157 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 5e-06
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 490 FYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCI 539
YV ++ G +I L + K E+ I V+ +G+G G KLL +
Sbjct: 39 TYVAKQGGSVIGVYVLLET-RPKTMEIMNIAVAEHLQGKGIGKKLLRHAV 87
|
| >4evy_A Aminoglycoside N(6')-acetyltransferase type 1; center for structural genomics of infectious diseases (csgid national institute of allergy and infectious diseases; HET: TOY; 1.77A {Acinetobacter haemolyticus} PDB: 4f0y_A 4e8o_A Length = 166 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 5e-06
Identities = 15/93 (16%), Positives = 27/93 (29%), Gaps = 9/93 (9%)
Query: 452 RTAKVTDLSGIKQIIQPLV--ESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFF 509
+ A L ++ L + ++ + L + + + Q IA F
Sbjct: 25 KPASEASLKDWLELRNKLWSDSEASHLQEMHQLLAEKYALQLLAYSDHQAIAMLEASIRF 84
Query: 510 -------KEKCGEVAAIGVSPECRGQGQGDKLL 535
G + I V P R G L+
Sbjct: 85 EYVNGTETSPVGFLEGIYVLPAHRRSGVATMLI 117
|
| >1s3z_A Aminoglycoside 6'-N-acetyltransferase; GNAT, aminoglycoside ribostamycin; HET: COA RIO; 2.00A {Salmonella enteritidis} SCOP: d.108.1.1 PDB: 1s5k_A* 1s60_A* 2vbq_A* Length = 165 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 7e-06
Identities = 16/94 (17%), Positives = 29/94 (30%), Gaps = 10/94 (10%)
Query: 452 RTAKVTDLSGIKQIIQPLVESG---ALVRRTDEELLKALDSFYVVEREGQIIACAALFPF 508
R T L + + + L A + +E L + ++ +G I A
Sbjct: 24 RQMNKTHLEHWRGLRKQLWPGHPDDAHLADGEEILQADHLASFIAMADGVAIGFADASIR 83
Query: 509 F-------KEKCGEVAAIGVSPECRGQGQGDKLL 535
+ I V P R +G +L+
Sbjct: 84 HDYVNGCDSSPVVFLEGIFVLPSFRQRGVAKQLI 117
|
| >2i79_A Acetyltransferase, GNAT family; acetyl coenzyme *A, structur genomics, PSI-2, protein structure initiative; HET: ACO; 2.10A {Streptococcus pneumoniae} Length = 172 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 9e-06
Identities = 16/105 (15%), Positives = 33/105 (31%), Gaps = 17/105 (16%)
Query: 452 RTAKVTDLSGIKQII-QPLVESGALVR------RTDEELLKALDS--------FYVVERE 496
R A+ D + + + + +E+ T EE+ L+ +
Sbjct: 8 REAEPKDAAELVAFLNRVSLETDFTSLDGDGILLTSEEMEIFLNKQASSDNQITLLAFLN 67
Query: 497 GQIIACAALFPFFKEKCGEVA--AIGVSPECRGQGQGDKLLGLCI 539
G+I + +++ + I + G G LL I
Sbjct: 68 GKIAGIVNITADQRKRVRHIGDLFIVIGKRYWNNGLGSLLLEEAI 112
|
| >3ld2_A SMU.2055, putative acetyltransferase; HET: COA; 2.50A {Streptococcus mutans} Length = 197 | Back alignment and structure |
|---|
Score = 45.6 bits (108), Expect = 1e-05
Identities = 12/99 (12%), Positives = 32/99 (32%), Gaps = 12/99 (12%)
Query: 452 RTAKVTDLSGIKQII-QPLVESGALVRRTDEELLKALDS------FYVVEREGQIIACAA 504
++D+ + ++ + E V + + F V + + +I+
Sbjct: 38 SPMLLSDIEQVVELENKTWSEQNTPVPLPVASKDQIIQKFESNTHFLVAKIKDKIVGVLD 97
Query: 505 LFPFFKEK----CGEVAAIGVSPECRGQGQGDKLLGLCI 539
+ I V+ + R +G G L+ + +
Sbjct: 98 YSSLYPFPSGQHIVTFG-IAVAEKERRKGIGRALVQIFL 135
|
| >3t9y_A Acetyltransferase, GNAT family; PSI-biology, structural genomics, midwest center for structu genomics, MCSG; HET: PGE; 2.00A {Staphylococcus aureus} Length = 150 | Back alignment and structure |
|---|
Score = 44.8 bits (106), Expect = 1e-05
Identities = 24/143 (16%), Positives = 49/143 (34%), Gaps = 13/143 (9%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTD-EELLKALDS-----FYVVEREGQIIACAAL 505
R +D + Q+ + + G D ++ LK + + ++ +E +II + +
Sbjct: 9 RLFNNSDFEKLNQLCKLYDDLGYPTNENDLKKRLKKITNHDDYFLLLLIKENKIIGLSGM 68
Query: 506 FPFF----KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHIS-TNGFPFLR 560
+ + A + E R +G G +LL I+ +G R
Sbjct: 69 CKMMFYEKNAEYMRILAFVIHSEFRKKGYGKRLLADSE-EFSKRLNCKAITLNSGNRNER 127
Query: 561 GRTHSYY-RLKFNCSSKSFHISL 582
H Y + ++ F L
Sbjct: 128 LSAHKLYSDNGYVSNTSGFTKQL 150
|
| >3ey5_A Acetyltransferase-like, GNAT family; structural genomics, APC60148, GNAT famil protein structure initiative; 2.15A {Bacteroides thetaiotaomicron} Length = 181 | Back alignment and structure |
|---|
Score = 45.3 bits (107), Expect = 1e-05
Identities = 16/92 (17%), Positives = 31/92 (33%), Gaps = 15/92 (16%)
Query: 452 RTAKVTDLSGIKQIIQ---PLVESGALVRRTDEELLKALDS-----FYVVEREGQIIACA 503
T+ V +++++ P E R E L + D ++ + I
Sbjct: 11 TTSDVQHYKFMEELLVESFPPEE-----YRELEHLREYTDRIGNFHNNIIFDDDLPIGFI 65
Query: 504 ALFPFFKEKCGEVAAIGVSPECRGQGQGDKLL 535
+ F ++ V +P R G G + L
Sbjct: 66 TYWDF--DEFYYVEHFATNPALRNGGYGKRTL 95
|
| >2gan_A 182AA long hypothetical protein; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.10A {Pyrococcus horikoshii} SCOP: d.108.1.1 Length = 190 | Back alignment and structure |
|---|
Score = 45.5 bits (107), Expect = 1e-05
Identities = 29/125 (23%), Positives = 45/125 (36%), Gaps = 24/125 (19%)
Query: 430 LLELFKRDGMGTMVASDLYE-GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALD 488
LLEL R T E R D +G +++ +P ++ L + D
Sbjct: 17 LLELMFRIYRSTNGKYPALEWVKRKPNPNDFNGFREVYEPFLK---------FRLSQEFD 67
Query: 489 SFYVVEREGQIIACAALF--------------PFFKEKCGEVAAIGVSPECRGQGQGDKL 534
Y +++ +II AL EK G + V PE +G+G G L
Sbjct: 68 ELYTYQKDNRIIGTIALVYKRIKEKGIWWVPEELMNEKVGLIEFFVVDPEFQGKGIGSTL 127
Query: 535 LGLCI 539
L +
Sbjct: 128 LEFAV 132
|
| >3dr6_A YNCA; acetyltransferase, csgid target, essential gene, IDP00086, structural genomics, center for STRU genomics of infectious diseases; HET: MSE; 1.75A {Salmonella typhimurium} PDB: 3dr8_A* Length = 174 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 1e-05
Identities = 22/100 (22%), Positives = 35/100 (35%), Gaps = 18/100 (18%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGA----LVRRTDEELLKALDS-------FYVVEREGQII 500
R A D + I +I V A + L ++ V E G +
Sbjct: 7 RFADKADCAAITEIYNHAVLHTAAIWNDRTVDTDNRLAWYEARQLLGYPVLVSEENGVVT 66
Query: 501 ACAALFPFFKEKCG-----EVAAIGVSPECRGQGQGDKLL 535
A+ + + G E + + V P +G+G G KLL
Sbjct: 67 GYASFGDW-RSFDGFRYTVEHS-VYVHPAHQGKGLGRKLL 104
|
| >2ozg_A GCN5-related N-acetyltransferase; YP_325469.1, acetyltransfe (GNAT) family, structural genomics, joint center for struct genomics, JCSG; HET: COA; 2.00A {Anabaena variabilis} SCOP: d.106.1.4 d.108.1.10 Length = 396 | Back alignment and structure |
|---|
Score = 46.6 bits (110), Expect = 1e-05
Identities = 27/128 (21%), Positives = 48/128 (37%), Gaps = 24/128 (18%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKA---LDSFYVVEREGQIIACAALFPF 508
A ++ + ++E ++ D E+ L++F V+ RE ++ A+ P
Sbjct: 13 TKASQENIQQLGN----ILEQCFVMSFGDSEIYVKGIGLENFRVIYREQKVAGGLAILPM 68
Query: 509 F------KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPF--LR 560
+ +AA+G++PE RG G L+ + IS P L
Sbjct: 69 GQWWGGQRVPMAGIAAVGIAPEYRGDGAAIALIQHTL---------QEISEQDIPISVLY 119
Query: 561 GRTHSYYR 568
T YR
Sbjct: 120 PATQRLYR 127
|
| >1wwz_A Hypothetical protein PH1933; structural genomics, pyrococcus horikoshii OT3, riken struct genomics/proteomics initiative, RSGI; HET: ACO; 1.75A {Pyrococcus horikoshii} SCOP: d.108.1.1 Length = 159 | Back alignment and structure |
|---|
Score = 44.0 bits (104), Expect = 2e-05
Identities = 15/68 (22%), Positives = 25/68 (36%), Gaps = 5/68 (7%)
Query: 477 RRTDEELLKALDSFYVVEREGQIIACAALFP-----FFKEKCGEVAAIGVSPECRGQGQG 531
KA D F+V + +I+ + G + V + +G+G G
Sbjct: 44 NYIKWCWKKASDGFFVAKVGDKIVGFIVCDKDWFSKYEGRIVGAIHEFVVDKKFQGKGIG 103
Query: 532 DKLLGLCI 539
KLL C+
Sbjct: 104 RKLLITCL 111
|
| >2r7h_A Putative D-alanine N-acetyltransferase of GNAT FA; putative acetyltransferase of the GNAT family; 1.85A {Desulfovibrio desulfuricans subsp} Length = 177 | Back alignment and structure |
|---|
Score = 44.4 bits (105), Expect = 2e-05
Identities = 18/98 (18%), Positives = 33/98 (33%), Gaps = 11/98 (11%)
Query: 452 RTAKVTDLSGIKQIIQ-----PLVESGALVRRTDEELLKALDS---FYVVEREGQII--A 501
R D ++++++ E+ DE L+ F + + A
Sbjct: 24 RQVLPQDALLVRRVVESTGFFTPEEADVAQELVDEHLMHGAACGYHFVFATEDDDMAGYA 83
Query: 502 CAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCI 539
C P E ++ I V+P + G G LL +
Sbjct: 84 CYGPTPA-TEGTYDLYWIAVAPHRQHSGLGRALLAEVV 120
|
| >2ge3_A Probable acetyltransferase; structural GEN PSI, protein structure initiative, midwest center for struc genomics, MCSG; HET: ACO; 2.25A {Agrobacterium tumefaciens} SCOP: d.108.1.1 Length = 170 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 3e-05
Identities = 13/101 (12%), Positives = 33/101 (32%), Gaps = 13/101 (12%)
Query: 452 RTAKVTDLSGIKQII-QPLVESGAL----------VRRTDEELLKALDSFYVVEREGQII 500
+ + + + + E L VR ++++ +V +G +I
Sbjct: 11 KPIRAEHVESFHRALDAVSRERKYLSFLEAPPLEAVRAFVLDMIENDHPQFVAIADGDVI 70
Query: 501 ACAALFPFFKEKCGEVA--AIGVSPECRGQGQGDKLLGLCI 539
+ + +G+ P R +G G +L+ +
Sbjct: 71 GWCDIRRQDRATRAHCGTLGMGILPAYRNKGLGARLMRRTL 111
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.0 bits (108), Expect = 3e-05
Identities = 72/523 (13%), Positives = 142/523 (27%), Gaps = 155/523 (29%)
Query: 108 GEIVSSPYLDPILKDIAFLHHLGI-RFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSE 166
+I+S + D + + + + +L + +ID ++ + G R+ +
Sbjct: 19 KDILSV-FEDAFVDNFDCKDVQDMPKSIL---SKEEIDHIIMSKDAV---SGTLRLFWT- 70
Query: 167 SLAAAMEAAG--GIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGV 224
+ + ++ +E L S + +
Sbjct: 71 -----LLSKQEEMVQKFVEEVLRINYKFL-------MSPIKTEQRQPS------MMTRMY 112
Query: 225 VDGVD--YGATGEVKKVDVTRMRE---------RLDGGCLVILSNLGYSSSGE-VLNCNT 272
++ D Y K +V+R++ L V++ G SG+ +
Sbjct: 113 IEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLID--GVLGSGKTWV---- 166
Query: 273 YEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQRVK-QSEIAANYVK 331
C + K+ C +D I + ++++ K +I N+
Sbjct: 167 --ALDVCL----SYKVQCKMDFKI-----FWLNLKNCNSPETVLEMLQKLLYQIDPNWT- 214
Query: 332 AVAEEDITCFGHSDSIGSVYSSQNGK---TFSERRIATFNNG--VGFDNGNGLWSSE--Q 384
+ D HS +I S + + + N V N + +++
Sbjct: 215 --SRSD-----HSSNIKLRIHSIQAELRRLLKSKP---YENCLLV-LLN---VQNAKAWN 260
Query: 385 GFAIGGQERLSRLNGYLSELAAAAFVCR-----RGVQRVHLLDGTIGGVLLLELFKRDGM 439
F + C+ R Q L + L+ +
Sbjct: 261 AFNLS---------------------CKILLTTRFKQVTDFLSAATTTHISLD-HHSMTL 298
Query: 440 GTMVASDLYEGTRTAKVTDLSGIKQIIQPLVES--GALVR----RTD-------EELLKA 486
L + DL P S +R D ++L
Sbjct: 299 TPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTI 358
Query: 487 LDSFYVV----EREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPL 542
++S V E + +FP A I P LL L IW
Sbjct: 359 IESSLNVLEPAEYRKMFDRLS-VFP-------PSAHI---PT--------ILLSL-IWFD 398
Query: 543 LSETRYDHISTNGFPFLRGRTHSYYRLKFNCSSKSFHISLHSL 585
+ ++ + N H Y L K IS+ S+
Sbjct: 399 VIKSDVMVV-VNKL-------HKY-SL-VEKQPKESTISIPSI 431
|
| >1yx0_A Hypothetical protein YSNE; NESG, GFT structral genomics, SR220, structural genomics, PSI, protein structure initiative; NMR {Bacillus subtilis subsp} SCOP: d.108.1.1 Length = 159 | Back alignment and structure |
|---|
Score = 43.3 bits (102), Expect = 4e-05
Identities = 13/74 (17%), Positives = 26/74 (35%), Gaps = 10/74 (13%)
Query: 475 LVRRTDEELLKALD---------SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPEC 525
+ + E + AL +F+ ++ C AL GE+ ++ S
Sbjct: 24 MTLMSPPESIHALGLEKLRGPEITFWSAWEGDELAGCGALKELDTR-HGEIKSMRTSASH 82
Query: 526 RGQGQGDKLLGLCI 539
+G ++L I
Sbjct: 83 LRKGVAKQVLQHII 96
|
| >2hv2_A Hypothetical protein; PSI, protein structure initiative, midwest center for struct genomics, MCSG, structural genomics, unknown function; HET: EPE PG4; 2.40A {Enterococcus faecalis} SCOP: d.106.1.4 d.108.1.10 Length = 400 | Back alignment and structure |
|---|
Score = 45.1 bits (106), Expect = 4e-05
Identities = 13/87 (14%), Positives = 31/87 (35%), Gaps = 13/87 (14%)
Query: 488 DSFYVVEREGQIIACAALFPFF------KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWP 541
Y + Q+ + PF + + + PE RG+G ++
Sbjct: 47 TQSYGFLIDEQLTSQVMATPFQVNFHGVRYPMAGIGYVASYPEYRGEGGISAIMKE---- 102
Query: 542 LLSETRYDHISTNGFPFLRGRTHSYYR 568
+L++ ++ +L ++ +YR
Sbjct: 103 MLADLAKQKVA---LSYLAPFSYPFYR 126
|
| >2oh1_A Acetyltransferase, GNAT family; YP_013287.1, structural genom joint center for structural genomics, JCSG, protein structu initiative; HET: MSE UNL; 1.46A {Listeria monocytogenes str} Length = 179 | Back alignment and structure |
|---|
Score = 43.7 bits (103), Expect = 4e-05
Identities = 22/139 (15%), Positives = 37/139 (26%), Gaps = 34/139 (24%)
Query: 452 RTAKVTDLSGIKQIIQ----PLVESG------ALVRRTDEELLKALDS--FYVVEREGQI 499
R A TD I ++ L ESG L + + ++ + E E
Sbjct: 17 RFAAPTDRLKINDLMIDTARWLKESGSTQWSDILHGFDVHNIEQRIELGEVALFETEAGA 76
Query: 500 IACAALF-------------PFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSET 546
+A A + +K + I VS G +++
Sbjct: 77 LAGAMIIRKTPSDWDTDLWEDLAIDKAYYLHRIMVSRAFSGISLSKQMIYFAE------- 129
Query: 547 RYDHISTNGFPFLRGRTHS 565
PF+R
Sbjct: 130 --KLGIEMSVPFIRLDCIE 146
|
| >1z4e_A Transcriptional regulator; nysgxrc target T2017, GNAT fold, structural genomics, PSI, P structure initiative; 2.00A {Bacillus halodurans} SCOP: d.108.1.1 Length = 153 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 5e-05
Identities = 16/104 (15%), Positives = 30/104 (28%), Gaps = 16/104 (15%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSF-----------YVVEREGQII 500
R A DL + ++ V R + + +F V +I+
Sbjct: 8 REATEGDLEQMVHMLADDVLGRKRERYEKPLPVSYVRAFKEIKKDKNNELIVACNGEEIV 67
Query: 501 ACAALF-----PFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCI 539
+ + + + RGQG G +L+ I
Sbjct: 68 GMLQVTFTPYLTYQGSWRATIEGVRTHSAARGQGIGSQLVCWAI 111
|
| >1yr0_A AGR_C_1654P, phosphinothricin acetyltransferase; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.00A {Agrobacterium tumefaciens str} SCOP: d.108.1.1 Length = 175 | Back alignment and structure |
|---|
Score = 43.3 bits (103), Expect = 5e-05
Identities = 23/100 (23%), Positives = 37/100 (37%), Gaps = 18/100 (18%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGA----LVRRTDEELLKALDS-------FYVVEREGQII 500
R A V DLSGI +I V + V E + V +G++
Sbjct: 8 RDATVDDLSGIMEIYNDAVVNTTAIWNEVVVDLENRKDWFAARTSRGFPVIVAILDGKVA 67
Query: 501 ACAALFPFFKEKCG-----EVAAIGVSPECRGQGQGDKLL 535
A+ + + G E + + V + RG G G +L+
Sbjct: 68 GYASYGDW-RAFDGYRHTREHS-VYVHKDARGHGIGKRLM 105
|
| >2r1i_A GCN5-related N-acetyltransferase; YP_831484.1, putative acetyltransferase, arthrobacter SP. FB acetyltransferase (GNAT) family; HET: MSE; 1.65A {Arthrobacter SP} Length = 172 | Back alignment and structure |
|---|
Score = 43.2 bits (102), Expect = 6e-05
Identities = 17/94 (18%), Positives = 28/94 (29%), Gaps = 10/94 (10%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL------DSFYVVEREGQIIACAAL 505
R A D + + Q++ +EL L + V+ A L
Sbjct: 26 RRATPADAATVAQMLHDFNTEFGAPTPGTDELASRLSHLLAGEDVVVLLAGEPPTGLAVL 85
Query: 506 FP----FFKEKCGEVAAIGVSPECRGQGQGDKLL 535
++ + + V P RG G LL
Sbjct: 86 SFRPNVWYPGPVAILDELYVRPGRRGHRLGSALL 119
|
| >3pp9_A Putative streptothricin acetyltransferase; toxin production resistance, infectious diseases, structural genomics; HET: MSE ACO; 1.60A {Bacillus anthracis} Length = 187 | Back alignment and structure |
|---|
Score = 43.3 bits (102), Expect = 6e-05
Identities = 13/82 (15%), Positives = 27/82 (32%), Gaps = 1/82 (1%)
Query: 458 DLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVA 517
+ + + +++ +E + K Y+ QII L + +
Sbjct: 46 TVEDVPSYEKSYLQNDNEELVYNEYINKPNQIIYIALLHNQIIGFIVLKKNW-NNYAYIE 104
Query: 518 AIGVSPECRGQGQGDKLLGLCI 539
I V + R G G +L+
Sbjct: 105 DITVDKKYRTLGVGKRLIAQAK 126
|
| >3n7z_A Acetyltransferase, GNAT family; PSI2, MCSG, structural genomics, protein structure initiativ midwest center for structural genomics; 2.75A {Bacillus anthracis} Length = 388 | Back alignment and structure |
|---|
Score = 44.8 bits (105), Expect = 6e-05
Identities = 26/131 (19%), Positives = 43/131 (32%), Gaps = 27/131 (20%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEEL------LKALDSFYVVEREGQIIACAAL 505
K ++ ++ L E + ++ L +K Y + + A L
Sbjct: 7 IRLKEDKF---REALR-LSEYAFQYKVDEDRLQQQITKMKESHEVYGIMEGENLAAKLHL 62
Query: 506 FPFF------KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPF- 558
PF K K G VA + PE R G +LL + + +G+
Sbjct: 63 IPFHIYIGKEKFKMGGVAGVATYPEYRRSGYVKELLQHSL---------QTMKKDGYTVS 113
Query: 559 -LRGRTHSYYR 568
L S+YR
Sbjct: 114 MLHPFAVSFYR 124
|
| >3bln_A Acetyltransferase GNAT family; NP_981174.1, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE MRD GOL; 1.31A {Bacillus cereus} Length = 143 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 7e-05
Identities = 19/88 (21%), Positives = 33/88 (37%), Gaps = 3/88 (3%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKE 511
A + DL I I ++ + + RR + +V+ + I F +
Sbjct: 6 TKASIDDLDSIVHIDIDVIGNDS--RRNYIKHSIDEGRCVIVKEDNSISGFLTYDTNFFD 63
Query: 512 KCGEVAAIGVSPECRGQGQGDKLLGLCI 539
C ++ I VSP R +G LL +
Sbjct: 64 -CTFLSLIIVSPTKRRRGYASSLLSYML 90
|
| >2ob0_A Human MAK3 homolog; acetyltransferase, structural genomics consortium, SGC; HET: ACO; 1.80A {Homo sapiens} PDB: 2psw_A* 3tfy_A* Length = 170 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 1e-04
Identities = 9/57 (15%), Positives = 21/57 (36%), Gaps = 2/57 (3%)
Query: 481 EELLKALDSFYVVEREGQII--ACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLL 535
+++L+ + + + C + +K + +G R G G K+L
Sbjct: 38 KDVLEVGELAKLAYFNDIAVGAVCCRVDHSQNQKRLYIMTLGCLAPYRRLGIGTKML 94
|
| >3frm_A Uncharacterized conserved protein; APC61048, staphylococcus epidermidis ATCC structural genomics, PSI-2, protein structure initiative; HET: MES; 2.32A {Staphylococcus epidermidis} Length = 254 | Back alignment and structure |
|---|
Score = 43.1 bits (101), Expect = 1e-04
Identities = 10/55 (18%), Positives = 17/55 (30%), Gaps = 2/55 (3%)
Query: 481 EELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLL 535
V Q + + +K E+ GV E + QG G ++
Sbjct: 157 SSYNLDDIERLVAYVNHQPVGIVDII--MTDKTIEIDGFGVLEEFQHQGIGSEIQ 209
|
| >2pdo_A Acetyltransferase YPEA; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: MSE; 2.00A {Shigella flexneri 2A} Length = 144 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 1e-04
Identities = 18/87 (20%), Positives = 29/87 (33%), Gaps = 5/87 (5%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGA--LVRRTDEELLKALDS-FYVVEREGQIIACAALFPF 508
R + D + + + E + S F V E G+++
Sbjct: 7 RVFRQEDFEEVITLWERCDLLRPWNDPEMDIERKMNHDVSLFLVAEVNGEVVGTVMGGYD 66
Query: 509 FKEKCGEVAAIGVSPECRGQGQGDKLL 535
G +GV PE RG+G + LL
Sbjct: 67 GHR--GSAYYLGVHPEFRGRGIANALL 91
|
| >1bo4_A Protein (serratia marcescens aminoglycoside-3-N- acetyltransferase); eubacterial aminoglyco resistance, GCN5-related N-acetyltransferase; HET: SPD COA; 2.30A {Serratia marcescens} SCOP: d.108.1.1 Length = 168 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 1e-04
Identities = 15/111 (13%), Positives = 32/111 (28%), Gaps = 16/111 (14%)
Query: 439 MGTMVASDLYEGTRTAKVTDLSGIKQIIQ------PLVESGALVRRTDEELLKALDS--- 489
+G + T + ++ + V + + + + L L S
Sbjct: 19 LGGSSMGIIR--TCRLGPDQVKSMRAALDLFGREFGDVATYSQHQPDSDYLGNLLRSKTF 76
Query: 490 -FYVVEREGQIIACAALFPFFK----EKCGEVAAIGVSPECRGQGQGDKLL 535
+ ++ A + K + + VS E R QG L+
Sbjct: 77 IALAAFDQEAVVGALAAYVLPKFEQPRSEIYIYDLAVSGEHRRQGIATALI 127
|
| >1z4r_A General control of amino acid synthesis protein 5-like 2; GCN5, acetyltransferase, SGC, structural genomics, structural genomics consortium; HET: ACO; 1.74A {Homo sapiens} SCOP: d.108.1.1 PDB: 1cm0_B* Length = 168 | Back alignment and structure |
|---|
Score = 41.8 bits (98), Expect = 1e-04
Identities = 13/81 (16%), Positives = 30/81 (37%), Gaps = 9/81 (11%)
Query: 459 LSGIKQIIQPLVESGALVRRTDEELLKALDS----FYVVEREGQIIACAALFPFFKEKCG 514
L G++ + L R E + + + + ++G++I F +
Sbjct: 26 LVGLQNVFS-----HQLPRMPKEYIARLVFDPKHKTLALIKDGRVIGGICFRMFPTQGFT 80
Query: 515 EVAAIGVSPECRGQGQGDKLL 535
E+ V+ + +G G L+
Sbjct: 81 EIVFCAVTSNEQVKGYGTHLM 101
|
| >1i12_A Glucosamine-phosphate N-acetyltransferase; GNAT, alpha/beta; HET: ACO; 1.30A {Saccharomyces cerevisiae} SCOP: d.108.1.1 PDB: 1i1d_A* 1i21_A Length = 160 | Back alignment and structure |
|---|
Score = 41.4 bits (97), Expect = 2e-04
Identities = 20/107 (18%), Positives = 38/107 (35%), Gaps = 23/107 (21%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFY------------------VV 493
R + DL + + ++ L G + + +L+K + V
Sbjct: 11 RRMEEGDLEQVTETLKVLTTVGTITPESFCKLIKYWNEATVWNDNEDKKIMQYNPMVIVD 70
Query: 494 EREGQIIACAALFPFFK-----EKCGEVAAIGVSPECRGQGQGDKLL 535
+R + A + K CG + I V+ + +GQG G L+
Sbjct: 71 KRTETVAATGNIIIERKIIHELGLCGHIEDIAVNSKYQGQGLGKLLI 117
|
| >1vhs_A Similar to phosphinothricin acetyltransferase; structural genomics, unknown function; 1.80A {Bacillus subtilis} SCOP: d.108.1.1 Length = 175 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 2e-04
Identities = 25/100 (25%), Positives = 37/100 (37%), Gaps = 18/100 (18%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGA----LVRRTDEELLKALDSF------YVVERE-GQII 500
R A+ DL + I + S T E+ ++ YV E E G +
Sbjct: 6 RLAEHRDLEAVVAIYNSTIASRMVTADTEPVTPEDRMEWFSGHTESRPLYVAEDENGNVA 65
Query: 501 ACAALFPFFKEKCG-----EVAAIGVSPECRGQGQGDKLL 535
A + F + EV+ I + CRG+G G LL
Sbjct: 66 AWISFETF-YGRPAYNKTAEVS-IYIDEACRGKGVGSYLL 103
|
| >3f8k_A Protein acetyltransferase; GCN5-related N-acetyltransferase; HET: COA; 1.84A {Sulfolobus solfataricus P2} Length = 160 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 2e-04
Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 16/98 (16%)
Query: 452 RTAKVTDLSGIKQIIQPLVESG------ALVRRTDEELLKALDS----FYVVEREGQIIA 501
R A D I Q+ L + L R T+E+ K + ++ E +G+++
Sbjct: 8 RKATKEDWEKIYQLYNSLSDEDLYLRFFHLYRITEEDAKKIASNEDHVTFLAEVDGKVVG 67
Query: 502 CAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCI 539
A+L GE + + V R G G L+ I
Sbjct: 68 EASLHK-----DGEFS-LVVHRNYRTLGIGTLLVKTLI 99
|
| >2vez_A Putative glucosamine 6-phosphate acetyltransferase; acyltransferase; HET: ACO G6P; 1.45A {Aspergillus fumigatus} PDB: 2vxk_A* Length = 190 | Back alignment and structure |
|---|
Score = 41.8 bits (98), Expect = 2e-04
Identities = 21/118 (17%), Positives = 40/118 (33%), Gaps = 15/118 (12%)
Query: 433 LFKRDGMGTMVASDLYEGT--RTAKVTDLS-GIKQIIQPLVESGALVRRTDEELLKALDS 489
LF + V + L R +D G +++ L G + + + +
Sbjct: 30 LFSPSLISPDVLAVLPADYTIRPLCRSDYKRGYLDVLRVLTTVGDINEEQWNSRYEWIRA 89
Query: 490 -------FYVVEREGQIIACAALF--PFFKEKCGEVAAI---GVSPECRGQGQGDKLL 535
V + EG+I+ +L F G V I V +G+ G +++
Sbjct: 90 RSDEYYLLVVCDGEGRIVGTGSLVVERKFIHSLGMVGHIEDIAVEKGQQGKKLGLRII 147
|
| >2x7b_A N-acetyltransferase SSO0209; HET: COA; 1.95A {Sulfolobus solfataricus} Length = 168 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 2e-04
Identities = 21/98 (21%), Positives = 36/98 (36%), Gaps = 18/98 (18%)
Query: 452 RTAKVTDLSGIKQIIQ-PLVES---GALVRRTDEELLKALDSFYVVEREGQII------- 500
R A++ D+ I +I + L E+ V E L + +F+V + ++
Sbjct: 16 RNARMDDIDQIIKINRLTLPENYPYYFFV----EHLKEYGLAFFVAIVDNSVVGYIMPRI 71
Query: 501 ---ACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLL 535
+ G V +I V E R +G LL
Sbjct: 72 EWGFSNIKQLPSLVRKGHVVSIAVLEEYRRKGIATTLL 109
|
| >3exn_A Probable acetyltransferase; GCN5-related N-acetyltransferase, MCSG, P structural genomics, protein structure initiative; HET: ACO; 1.80A {Thermus thermophilus} Length = 160 | Back alignment and structure |
|---|
Score = 41.3 bits (97), Expect = 2e-04
Identities = 13/113 (11%), Positives = 33/113 (29%), Gaps = 14/113 (12%)
Query: 439 MGTMVASDLYEGTRTAKVTDLSGIKQIIQ-----------PLVESGALVRRTDEELLKAL 487
MG M L D + ++ L +VR +
Sbjct: 4 MGAMHVLTLD--LAPVTPKDAPLLHRVFHLSPSYFALIGMELPTLEDVVRDLQTLEVDPR 61
Query: 488 DSFYVVEREGQIIACAALFPFFKE-KCGEVAAIGVSPECRGQGQGDKLLGLCI 539
+++ + + + E + ++ + + + +G+G G + L
Sbjct: 62 RRAFLLFLGQEPVGYLDAKLGYPEAEDATLSLLLIREDHQGRGLGRQALERFA 114
|
| >3fnc_A Protein LIN0611, putative acetyltransferase; GNAT, RIMI, structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.75A {Listeria innocua} Length = 163 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 2e-04
Identities = 23/103 (22%), Positives = 41/103 (39%), Gaps = 16/103 (15%)
Query: 452 RTAKVTDLSGIKQII--------QPLVESGAL-----VRRTDEELLKALDS--FYVVERE 496
R A +D I+ + Q L+ S E L + + F V+E+
Sbjct: 9 RKATNSDAEAIQHVATTSWHHTYQDLIPSDVQDDFLKRFYNVETLHNRISATPFAVLEQA 68
Query: 497 GQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCI 539
++I A ++ E+AA + PE +G G +LL + +
Sbjct: 69 DKVIGFANFIEL-EKGKSELAAFYLLPEVTQRGLGTELLEVGM 110
|
| >3fyn_A Integron gene cassette protein HFX_CASS3; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.45A {Uncultured bacterium} Length = 176 | Back alignment and structure |
|---|
Score = 41.3 bits (97), Expect = 3e-04
Identities = 19/96 (19%), Positives = 33/96 (34%), Gaps = 12/96 (12%)
Query: 452 RTAKVTDLSGIKQIIQPLVE------SGALVRRTDEELLKALDS--FYVVEREGQIIACA 503
RTA + D+ + +++ + R + LL D +++ + +
Sbjct: 27 RTAHIGDVPVLVRLMSEFYQEAGFALPHDAAIRAFKALLGKPDLGRIWLIAEGTESVGYI 86
Query: 504 ALFPFF-KEKCGEVA---AIGVSPECRGQGQGDKLL 535
L F E G V P RG+G G L
Sbjct: 87 VLTLGFSMEYGGLRGFVDDFFVRPNARGKGLGAAAL 122
|
| >1vkc_A Putative acetyl transferase; structural genomics, pyrococcus furiosus southeast collaboratory for structural genomics, secsg; 1.89A {Pyrococcus furiosus} SCOP: d.108.1.1 Length = 158 | Back alignment and structure |
|---|
Score = 40.5 bits (95), Expect = 3e-04
Identities = 21/104 (20%), Positives = 35/104 (33%), Gaps = 17/104 (16%)
Query: 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRT-------DEELLKAL-----DSFYVVERE 496
E T + IK++ + + S + EEL ++L F+V E
Sbjct: 10 EYTIVDGEEYIEEIKKLDREISYSFVRFPISYEEYEERHEELFESLLSQGEHKFFVALNE 69
Query: 497 -GQIIACAALFPFF----KEKCGEVAAIGVSPECRGQGQGDKLL 535
+++ + K + I V RG G G LL
Sbjct: 70 RSELLGHVWICITLDTVDYVKIAYIYDIEVVKWARGLGIGSALL 113
|
| >3gy9_A GCN5-related N-acetyltransferase; YP_001815201.1, putative acetyltransferase; HET: MSE COA SO4; 1.52A {Exiguobacterium sibiricum 255-15} PDB: 3gya_A* Length = 150 | Back alignment and structure |
|---|
Score = 40.7 bits (95), Expect = 3e-04
Identities = 18/96 (18%), Positives = 30/96 (31%), Gaps = 8/96 (8%)
Query: 452 RTAKVTDLSGIKQIIQPLVESG-ALVRRTDEELLKALDS------FYVVEREGQIIACAA 504
D ++ + G LV R + F + Q++AC
Sbjct: 7 ERVNDFDGYNWLPLLAKSSQEGFQLVERMLRNRREESFQEDGEAMFVALSTTNQVLACGG 66
Query: 505 LFPFFKE-KCGEVAAIGVSPECRGQGQGDKLLGLCI 539
+ + G + + V PE R G G LL +
Sbjct: 67 YMKQSGQARTGRIRHVYVLPEARSHGIGTALLEKIM 102
|
| >3iwg_A Acetyltransferase, GNAT family; structural genomics, APC, PSI-2, protein structure initiativ midwest center for structural genomics; HET: MSE; 2.30A {Colwellia psychrerythraea} Length = 276 | Back alignment and structure |
|---|
Score = 41.3 bits (96), Expect = 5e-04
Identities = 16/90 (17%), Positives = 30/90 (33%), Gaps = 3/90 (3%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKE 511
+ A L+ + + L + +G+++A F +
Sbjct: 144 QIAGTEQLTAFVTFAAANIGAPEQWLTQYYGNLIERKELFGYWHKGKLLAAGECRLFDQY 203
Query: 512 KCGEVAAIG--VSPECRGQGQGDKLLGLCI 539
+ E A +G V+ RGQG K+L
Sbjct: 204 Q-TEYADLGMIVAQSNRGQGIAKKVLTFLT 232
|
| >1on0_A YYCN protein; structural genomics, alpha-beta protein with anti-parallel B strands, PSI, protein structure initiative; 2.20A {Bacillus subtilis} SCOP: d.108.1.1 Length = 158 | Back alignment and structure |
|---|
Score = 40.2 bits (94), Expect = 5e-04
Identities = 8/52 (15%), Positives = 17/52 (32%), Gaps = 2/52 (3%)
Query: 490 FYVVEREGQII--ACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCI 539
+ + E I+ P ++ + G+ RG+G + L
Sbjct: 63 WSLKLNEKDIVGWLWIHAEPEHPQQEAFIYDFGLYEPYRGKGYAKQALAALD 114
|
| >3lod_A Putative acyl-COA N-acyltransferase; structural genomics, PSI2, MCSG, structure initiative; 2.50A {Klebsiella pneumoniae subsp} Length = 162 | Back alignment and structure |
|---|
Score = 40.0 bits (94), Expect = 5e-04
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 480 DEELLKALDSFYVV--EREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLL 535
D L + +G+ + C A+ +E GE+ + + P+ RGQ G+KLL
Sbjct: 40 DLSQLPPQTVIALAIRSPQGEAVGCGAIVLS-EEGFGEMKRVYIDPQHRGQQLGEKLL 96
|
| >1ygh_A ADA4, protein (transcriptional activator GCN5); transcriptional regulation, histone acetylation; 1.90A {Saccharomyces cerevisiae} SCOP: d.108.1.1 Length = 164 | Back alignment and structure |
|---|
Score = 40.2 bits (94), Expect = 5e-04
Identities = 11/65 (16%), Positives = 25/65 (38%)
Query: 489 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRY 548
S V+ + ++ PF K + E+ +S + +G G L+ + + +
Sbjct: 49 SMAVIRKPLTVVGGITYRPFDKREFAEIVFCAISSTEQVRGYGAHLMNHLKDYVRNTSNI 108
Query: 549 DHIST 553
+ T
Sbjct: 109 KYFLT 113
|
| >2atr_A Acetyltransferase, GNAT family; MCSG, structural genomics, PSI, protein structure INIT midwest center for structural genomics; 2.01A {Streptococcus pneumoniae} SCOP: d.108.1.1 Length = 138 | Back alignment and structure |
|---|
Score = 39.5 bits (92), Expect = 5e-04
Identities = 17/94 (18%), Positives = 29/94 (30%), Gaps = 9/94 (9%)
Query: 478 RTDEELLKALD---SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKL 534
E L +AL Y+ ++ L V + V P + QG G L
Sbjct: 29 HQTEMLEQALSHSLVIYLALDGDAVVGLIRLVGDG-FSSVFVQDLIVLPSYQRQGIGSSL 87
Query: 535 LGLCIWPLLSETRYDHISTNGFPFLRGRTHSYYR 568
+ + E ++T + +YR
Sbjct: 88 MKEAL-GNFKEAYQVQLATEETE----KNVGFYR 116
|
| >1ufh_A YYCN protein; alpha and beta, fold, acetyltransferase, structural genomics, PSI, protein structure initiative; 2.20A {Bacillus subtilis subsp} SCOP: d.108.1.1 Length = 180 | Back alignment and structure |
|---|
Score = 40.2 bits (94), Expect = 6e-04
Identities = 8/52 (15%), Positives = 17/52 (32%), Gaps = 2/52 (3%)
Query: 490 FYVVEREGQII--ACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCI 539
+ + E I+ P ++ + G+ RG+G + L
Sbjct: 87 WSLKLNEKDIVGWLWIHAEPEHPQQEAFIYDFGLYEPYRGKGYAKQALAALD 138
|
| >1y9w_A Acetyltransferase; structural genomics, Pro structure initiative, PSI, midwest center for structural GE MCSG; 1.90A {Bacillus cereus} SCOP: d.108.1.1 Length = 140 | Back alignment and structure |
|---|
Score = 39.2 bits (91), Expect = 7e-04
Identities = 12/47 (25%), Positives = 17/47 (36%), Gaps = 2/47 (4%)
Query: 489 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLL 535
S V EG+I +F + + V R G G +LL
Sbjct: 41 SLVVKNEEGKIFGGVTGTMYFYH--LHIDFLWVDESVRHDGYGSQLL 85
|
| >2cnt_A Modification of 30S ribosomal subunit protein S18; N-alpha acetylation, GCN5-N-acetyltransferase, ribosomal Pro acetyltransferase, GNAT; HET: COA; 2.4A {Salmonella typhimurium} PDB: 2cnm_A* 2cns_A* Length = 160 | Back alignment and structure |
|---|
Score = 39.6 bits (93), Expect = 7e-04
Identities = 11/59 (18%), Positives = 19/59 (32%), Gaps = 2/59 (3%)
Query: 481 EELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCI 539
+ + ++ A A E + I V P+ + +G G LL I
Sbjct: 33 FGNQGERYLNLKLTADDRMAAFAITQVVLDE--ATLFNIAVDPDFQRRGLGRMLLEHLI 89
|
| >1m4i_A Aminoglycoside 2'-N-acetyltransferase; COA binding motif; HET: COA KAN PAP; 1.50A {Mycobacterium tuberculosis} SCOP: d.108.1.1 PDB: 1m4d_A* 1m4g_A* 1m44_A* Length = 181 | Back alignment and structure |
|---|
Score = 39.6 bits (92), Expect = 8e-04
Identities = 23/92 (25%), Positives = 34/92 (36%), Gaps = 8/92 (8%)
Query: 452 RTAKVTDLS-GIKQIIQPLVESGALVRRTDEELLKALDSFYVV-EREGQIIACAALFPFF 509
R DL +Q I+ +V T+ + L + + G IIA AA+
Sbjct: 9 RLVHTADLDSETRQDIRQMVTGAFAGDFTETDWEHTLGGMHALIWHHGAIIAHAAVIQRR 68
Query: 510 ------KEKCGEVAAIGVSPECRGQGQGDKLL 535
+CG V + V + RGQ LL
Sbjct: 69 LIYRGNALRCGYVEGVAVRADWRGQRLVSALL 100
|
| >2fiw_A GCN5-related N-acetyltransferase:aminotransferase II; alpha-beta-alpha sandwich, GCN4-related acetyltransferase, S genomics, PSI; HET: ACO; 2.35A {Rhodopseudomonas palustris} SCOP: d.108.1.1 Length = 172 | Back alignment and structure |
|---|
Score = 39.4 bits (92), Expect = 8e-04
Identities = 13/99 (13%), Positives = 29/99 (29%), Gaps = 20/99 (20%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEEL---------------LKALDSFYVVERE 496
R D + I +E ++E+ + + +
Sbjct: 11 RPYLPEDAAVTAAIFVASIEQLTADDYSEEQQEAWASAADDEAKFAARLSGQLTLIATLQ 70
Query: 497 GQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLL 535
G + A+L + + + V P+ G+ G L+
Sbjct: 71 GVPVGFASL-----KGPDHIDMLYVHPDYVGRDVGTTLI 104
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 585 | |||
| 3d2m_A | 456 | Putative acetylglutamate synthase; protein-COA-Glu | 100.0 | |
| 3s6g_A | 460 | N-acetylglutamate kinase / N-acetylglutamate SYNT; | 100.0 | |
| 4ab7_A | 464 | Protein Arg5,6, mitochondrial; transferase, argini | 100.0 | |
| 2buf_A | 300 | Acetylglutamate kinase; acetyglutamate kinase, ADP | 100.0 | |
| 3s6k_A | 467 | Acetylglutamate kinase; synthase, transferase; 2.8 | 100.0 | |
| 2ap9_A | 299 | NAG kinase, acetylglutamate kinase, AGK; structura | 100.0 | |
| 2v5h_A | 321 | Acetylglutamate kinase; amino-acid biosynthesis, t | 100.0 | |
| 2rd5_A | 298 | Acetylglutamate kinase-like protein; protein-prote | 100.0 | |
| 2bty_A | 282 | Acetylglutamate kinase; N-acetyl-L-glutamate kinas | 100.0 | |
| 3zzh_A | 307 | Acetylglutamate kinase; transferase, arginine bios | 100.0 | |
| 3l86_A | 279 | Acetylglutamate kinase; ARGB, amino-acid biosynthe | 100.0 | |
| 2egx_A | 269 | Putative acetylglutamate kinase; struc genomics, N | 100.0 | |
| 1gs5_A | 258 | Acetylglutamate kinase; carbamate kinase, amino ac | 100.0 | |
| 3ll9_A | 269 | Isopentenyl phosphate kinase; mevalonate biosynthe | 100.0 | |
| 2e9y_A | 316 | Carbamate kinase; transferase, structural genomics | 100.0 | |
| 3k4o_A | 266 | Isopentenyl phosphate kinase; small molecule kinas | 100.0 | |
| 2we5_A | 310 | Carbamate kinase 1; arginine catabolism, arginine | 100.0 | |
| 1e19_A | 314 | Carbamate kinase-like carbamoylphosphate synthetas | 100.0 | |
| 3d40_A | 286 | FOMA protein; fosfomycin, antibiotic resistance, k | 100.0 | |
| 4axs_A | 332 | Carbamate kinase; oxidoreductase; 2.50A {Mycoplasm | 100.0 | |
| 3kzf_A | 317 | Carbamate kinase; arginine dihydrolase pathway, gi | 100.0 | |
| 3ll5_A | 249 | Gamma-glutamyl kinase related protein; alternate m | 100.0 | |
| 2j5v_A | 367 | Glutamate 5-kinase; proline biosynthesis, gamma gl | 100.0 | |
| 2ogx_A | 276 | Molybdenum storage protein subunit alpha; open alp | 99.97 | |
| 2ako_A | 251 | Glutamate 5-kinase; structural genomics, PSI, prot | 99.97 | |
| 4a7w_A | 240 | Uridylate kinase; transferase; HET: GTP; 1.80A {He | 99.97 | |
| 2j4j_A | 226 | Uridylate kinase; transferase, nucleoside monophos | 99.97 | |
| 2ogx_B | 270 | Molybdenum storage protein subunit beta; open alph | 99.96 | |
| 2ij9_A | 219 | Uridylate kinase; structural genomics, protein str | 99.96 | |
| 1z9d_A | 252 | Uridylate kinase, UK, UMP kinase; structural genom | 99.96 | |
| 2brx_A | 244 | Uridylate kinase; UMP kinase, amino acid kinase, p | 99.96 | |
| 2va1_A | 256 | Uridylate kinase; UMPK, transferase, pyrimidine bi | 99.96 | |
| 1ybd_A | 239 | Uridylate kinase; alpha/beta/alpha fold, hexamer, | 99.96 | |
| 3ek6_A | 243 | Uridylate kinase; UMPK unique GTP B site, alloster | 99.96 | |
| 2a1f_A | 247 | Uridylate kinase; PYRH, structural genomics, PSI, | 99.95 | |
| 3nwy_A | 281 | Uridylate kinase; allosterically activated form, A | 99.95 | |
| 3ab4_A | 421 | Aspartokinase; aspartate kinase, concerted inhibit | 99.95 | |
| 2jjx_A | 255 | Uridylate kinase, UMP kinase; structural genomics, | 99.94 | |
| 3l76_A | 600 | Aspartokinase; allostery, ACT domains, kinase tran | 99.89 | |
| 3c1m_A | 473 | Probable aspartokinase; allosteric inhibition, thr | 99.84 | |
| 2cdq_A | 510 | Aspartokinase; aspartate kinase, amino acid metabo | 99.74 | |
| 2j0w_A | 449 | Lysine-sensitive aspartokinase 3; feedback inhibit | 99.74 | |
| 3e0k_A | 150 | Amino-acid acetyltransferase; N-acetylglutamate sy | 99.61 | |
| 3tvi_A | 446 | Aspartokinase; structural genomics, ACT domains, r | 99.52 | |
| 2q0y_A | 153 | GCN5-related N-acetyltransferase; YP_295895.1, ace | 99.49 | |
| 2dxq_A | 150 | AGR_C_4057P, acetyltransferase; structural genomic | 99.46 | |
| 3t9y_A | 150 | Acetyltransferase, GNAT family; PSI-biology, struc | 99.46 | |
| 3t90_A | 149 | Glucose-6-phosphate acetyltransferase 1; GNAT fold | 99.42 | |
| 3i3g_A | 161 | N-acetyltransferase; malaria, structural genomics, | 99.41 | |
| 1tiq_A | 180 | Protease synthase and sporulation negative regulat | 99.4 | |
| 1z4e_A | 153 | Transcriptional regulator; nysgxrc target T2017, G | 99.38 | |
| 3efa_A | 147 | Putative acetyltransferase; structural genom 2, pr | 99.38 | |
| 1cjw_A | 166 | Protein (serotonin N-acetyltransferase); HET: COT; | 99.37 | |
| 1vkc_A | 158 | Putative acetyl transferase; structural genomics, | 99.37 | |
| 4evy_A | 166 | Aminoglycoside N(6')-acetyltransferase type 1; cen | 99.36 | |
| 3mgd_A | 157 | Predicted acetyltransferase; structural genomics, | 99.36 | |
| 4h89_A | 173 | GCN5-related N-acetyltransferase; N-acyltransferas | 99.36 | |
| 1u6m_A | 199 | Acetyltransferase, GNAT family; structural genomic | 99.35 | |
| 4ag7_A | 165 | Glucosamine-6-phosphate N-acetyltransferase; HET: | 99.35 | |
| 2pdo_A | 144 | Acetyltransferase YPEA; alpha-beta-alpha sandwich, | 99.35 | |
| 2aj6_A | 159 | Hypothetical protein MW0638; structural genomics, | 99.34 | |
| 2bei_A | 170 | Diamine acetyltransferase 2; SSAT2, BC011751, AAH1 | 99.34 | |
| 3gy9_A | 150 | GCN5-related N-acetyltransferase; YP_001815201.1, | 99.33 | |
| 3kkw_A | 182 | Putative uncharacterized protein; acetyltransferas | 99.33 | |
| 3bln_A | 143 | Acetyltransferase GNAT family; NP_981174.1, struct | 99.33 | |
| 2atr_A | 138 | Acetyltransferase, GNAT family; MCSG, structural g | 99.33 | |
| 4e0a_A | 164 | BH1408 protein; structural genomics, PSI-biology, | 99.32 | |
| 3dsb_A | 157 | Putative acetyltransferase; APC60368.2, ST genomic | 99.32 | |
| 2ozh_A | 142 | Hypothetical protein XCC2953; structural genomics, | 99.31 | |
| 1qsm_A | 152 | HPA2 histone acetyltransferase; protein-acetyl coe | 99.3 | |
| 1y7r_A | 133 | Hypothetical protein SA2161; structural genomics, | 99.3 | |
| 2cnt_A | 160 | Modification of 30S ribosomal subunit protein S18; | 99.3 | |
| 2fia_A | 162 | Acetyltransferase; structural genomics, PSI, prote | 99.29 | |
| 3d8p_A | 163 | Acetyltransferase of GNAT family; NP_373092.1, str | 99.29 | |
| 2x7b_A | 168 | N-acetyltransferase SSO0209; HET: COA; 1.95A {Sulf | 99.29 | |
| 1kux_A | 207 | Aralkylamine, serotonin N-acetyltransferase; enzym | 99.29 | |
| 3fyn_A | 176 | Integron gene cassette protein HFX_CASS3; integron | 99.29 | |
| 1i12_A | 160 | Glucosamine-phosphate N-acetyltransferase; GNAT, a | 99.29 | |
| 3lod_A | 162 | Putative acyl-COA N-acyltransferase; structural ge | 99.29 | |
| 2eui_A | 153 | Probable acetyltransferase; dimer, structural geno | 99.27 | |
| 3fix_A | 183 | N-acetyltransferase; termoplasma acidophilum, stru | 99.27 | |
| 2fe7_A | 166 | Probable N-acetyltransferase; structural genomics, | 99.27 | |
| 3i9s_A | 183 | Integron cassette protein; oyster POND, woods HOLE | 99.27 | |
| 2i6c_A | 160 | Putative acetyltransferase; GNAT family, structura | 99.27 | |
| 2ob0_A | 170 | Human MAK3 homolog; acetyltransferase, structural | 99.27 | |
| 1xeb_A | 150 | Hypothetical protein PA0115; midwest center for st | 99.27 | |
| 2vez_A | 190 | Putative glucosamine 6-phosphate acetyltransferase | 99.26 | |
| 3fnc_A | 163 | Protein LIN0611, putative acetyltransferase; GNAT, | 99.26 | |
| 2o28_A | 184 | Glucosamine 6-phosphate N-acetyltransferase; struc | 99.26 | |
| 2fiw_A | 172 | GCN5-related N-acetyltransferase:aminotransferase | 99.26 | |
| 1wwz_A | 159 | Hypothetical protein PH1933; structural genomics, | 99.25 | |
| 3dr6_A | 174 | YNCA; acetyltransferase, csgid target, essential g | 99.25 | |
| 1ghe_A | 177 | Acetyltransferase; acyl coenzyme A complex; HET: A | 99.25 | |
| 3jvn_A | 166 | Acetyltransferase; alpha-beta protein, structural | 99.25 | |
| 1bo4_A | 168 | Protein (serratia marcescens aminoglycoside-3-N- a | 99.24 | |
| 1q2y_A | 140 | Protein YJCF, similar to hypothetical proteins; GC | 99.24 | |
| 2q7b_A | 181 | Acetyltransferase, GNAT family; NP_689019.1, struc | 99.24 | |
| 1s3z_A | 165 | Aminoglycoside 6'-N-acetyltransferase; GNAT, amino | 99.23 | |
| 1n71_A | 180 | AAC(6')-II; aminoglycoside 6'-N-acetyltransferase, | 99.22 | |
| 2jdc_A | 146 | Glyphosate N-acetyltransferase; GNAT; HET: CAO; 1. | 99.22 | |
| 1y9w_A | 140 | Acetyltransferase; structural genomics, Pro struct | 99.21 | |
| 1mk4_A | 157 | Hypothetical protein YQJY; alpha-beta-alpha sandwi | 99.2 | |
| 2ae6_A | 166 | Acetyltransferase, GNAT family; GCN5-related N-ace | 99.2 | |
| 2oh1_A | 179 | Acetyltransferase, GNAT family; YP_013287.1, struc | 99.2 | |
| 4fd4_A | 217 | Arylalkylamine N-acetyltransferase like 5B; GNAT; | 99.2 | |
| 2ge3_A | 170 | Probable acetyltransferase; structural GEN PSI, pr | 99.2 | |
| 3ec4_A | 228 | Putative acetyltransferase from the GNAT family; Y | 99.19 | |
| 1ufh_A | 180 | YYCN protein; alpha and beta, fold, acetyltransfer | 99.19 | |
| 1on0_A | 158 | YYCN protein; structural genomics, alpha-beta prot | 99.19 | |
| 2i79_A | 172 | Acetyltransferase, GNAT family; acetyl coenzyme *A | 99.18 | |
| 1vhs_A | 175 | Similar to phosphinothricin acetyltransferase; str | 99.18 | |
| 2cy2_A | 174 | TTHA1209, probable acetyltransferase; structural g | 99.18 | |
| 2r7h_A | 177 | Putative D-alanine N-acetyltransferase of GNAT FA; | 99.18 | |
| 2ree_A | 224 | CURA; GNAT, S-acetyltransferase, decarboxylase, po | 99.17 | |
| 3ddd_A | 288 | Putative acetyltransferase; NP_142035.1, structura | 99.17 | |
| 1yx0_A | 159 | Hypothetical protein YSNE; NESG, GFT structral gen | 99.16 | |
| 1m4i_A | 181 | Aminoglycoside 2'-N-acetyltransferase; COA binding | 99.16 | |
| 3f8k_A | 160 | Protein acetyltransferase; GCN5-related N-acetyltr | 99.16 | |
| 2b5g_A | 171 | Diamine acetyltransferase 1; structural genomics, | 99.15 | |
| 1yr0_A | 175 | AGR_C_1654P, phosphinothricin acetyltransferase; s | 99.15 | |
| 3owc_A | 188 | Probable acetyltransferase; structural genomics, P | 99.15 | |
| 2j8m_A | 172 | Acetyltransferase PA4866 from P. aeruginosa; GCN5 | 99.14 | |
| 3exn_A | 160 | Probable acetyltransferase; GCN5-related N-acetylt | 99.14 | |
| 3ey5_A | 181 | Acetyltransferase-like, GNAT family; structural ge | 99.13 | |
| 3s6f_A | 145 | Hypothetical acetyltransferase; acyl-COA N-acyltra | 99.13 | |
| 2k5t_A | 128 | Uncharacterized protein YHHK; N-acetyl transferase | 99.13 | |
| 1y9k_A | 157 | IAA acetyltransferase; structural genomics, midwes | 99.13 | |
| 2r1i_A | 172 | GCN5-related N-acetyltransferase; YP_831484.1, put | 99.12 | |
| 3r1k_A | 428 | Enhanced intracellular surviVal protein; GNAT, ace | 99.11 | |
| 3iwg_A | 276 | Acetyltransferase, GNAT family; structural genomic | 99.11 | |
| 2pc1_A | 201 | Acetyltransferase, GNAT family; NP_688560.1, struc | 99.1 | |
| 3h4q_A | 188 | Putative acetyltransferase; NP_371943.1, structura | 99.1 | |
| 3ld2_A | 197 | SMU.2055, putative acetyltransferase; HET: COA; 2. | 99.09 | |
| 2jlm_A | 182 | Putative phosphinothricin N-acetyltransferase; met | 99.09 | |
| 2fl4_A | 149 | Spermine/spermidine acetyltransferase; structural | 99.09 | |
| 2d4p_A | 141 | Hypothetical protein TTHA1254; structural genomics | 99.08 | |
| 3d3s_A | 189 | L-2,4-diaminobutyric acid acetyltransferase; alpha | 99.07 | |
| 1z4r_A | 168 | General control of amino acid synthesis protein 5- | 99.07 | |
| 3g8w_A | 169 | Lactococcal prophage PS3 protein 05; APC61042, ace | 99.07 | |
| 4fd5_A | 222 | Arylalkylamine N-acetyltransferase 2; GNAT; 1.64A | 99.06 | |
| 2bue_A | 202 | AAC(6')-IB; GNAT, transferase, aminoglycoside, flu | 99.06 | |
| 1qst_A | 160 | TGCN5 histone acetyl transferase; GCN5-related N-a | 99.06 | |
| 3n7z_A | 388 | Acetyltransferase, GNAT family; PSI2, MCSG, struct | 99.05 | |
| 2g3a_A | 152 | Acetyltransferase; structural genomics, PSI, prote | 99.04 | |
| 3te4_A | 215 | GH12636P, dopamine N acetyltransferase, isoform A; | 99.04 | |
| 3fbu_A | 168 | Acetyltransferase, GNAT family; structur genomics, | 99.03 | |
| 2vi7_A | 177 | Acetyltransferase PA1377; GNAT, GCN5 family, N-ace | 99.02 | |
| 3sxn_A | 422 | Enhanced intracellular surviVal protein; GNAT fold | 99.02 | |
| 3qb8_A | 197 | A654L protein; GNAT N-acetyltransferase, acetyltra | 99.02 | |
| 2kcw_A | 147 | Uncharacterized acetyltransferase YJAB; GNAT fold, | 99.02 | |
| 2i00_A | 406 | Acetyltransferase, GNAT family; structural genomic | 99.02 | |
| 3eg7_A | 176 | Spermidine N1-acetyltransferase; structural genomi | 99.01 | |
| 2qec_A | 204 | Histone acetyltransferase HPA2 and related acetylt | 99.01 | |
| 3igr_A | 184 | Ribosomal-protein-S5-alanine N-acetyltransferase; | 99.0 | |
| 3tth_A | 170 | Spermidine N1-acetyltransferase; central intermedi | 99.0 | |
| 3f5b_A | 182 | Aminoglycoside N(6')acetyltransferase; APC60744, l | 99.0 | |
| 3juw_A | 175 | Probable GNAT-family acetyltransferase; structural | 98.99 | |
| 1ygh_A | 164 | ADA4, protein (transcriptional activator GCN5); tr | 98.99 | |
| 3frm_A | 254 | Uncharacterized conserved protein; APC61048, staph | 98.99 | |
| 2hv2_A | 400 | Hypothetical protein; PSI, protein structure initi | 98.98 | |
| 2wpx_A | 339 | ORF14; transferase, acetyl transferase, antibiotic | 98.98 | |
| 2gan_A | 190 | 182AA long hypothetical protein; alpha-beta protei | 98.97 | |
| 3eo4_A | 164 | Uncharacterized protein MJ1062; APC60792.2,MJ_1062 | 98.97 | |
| 1s7k_A | 182 | Acetyl transferase; GNAT; 1.80A {Salmonella typhim | 98.97 | |
| 2ozg_A | 396 | GCN5-related N-acetyltransferase; YP_325469.1, ace | 98.96 | |
| 2fsr_A | 195 | Acetyltransferase; alpha-beta-sandwich, structural | 98.96 | |
| 3r9f_A | 188 | MCCE protein; microcin C7, acetyltransferase, SELF | 98.92 | |
| 1nsl_A | 184 | Probable acetyltransferase; structural genomics, h | 98.91 | |
| 1yre_A | 197 | Hypothetical protein PA3270; APC5563, midwest cent | 98.9 | |
| 3tt2_A | 330 | GCN5-related N-acetyltransferase; structural genom | 98.89 | |
| 3tt2_A | 330 | GCN5-related N-acetyltransferase; structural genom | 98.89 | |
| 3pzj_A | 209 | Probable acetyltransferases; MCSG, PSI-2, structur | 98.87 | |
| 4fd7_A | 238 | Putative arylalkylamine N-acetyltransferase 7; GNA | 98.87 | |
| 1yvk_A | 163 | Hypothetical protein BSU33890; ALPHS-beta protein, | 98.87 | |
| 2z10_A | 194 | Ribosomal-protein-alanine acetyltransferase; alpha | 98.86 | |
| 3c26_A | 266 | Putative acetyltransferase TA0821; NP_394282.1, A | 98.85 | |
| 2fck_A | 181 | Ribosomal-protein-serine acetyltransferase, putat; | 98.84 | |
| 3pp9_A | 187 | Putative streptothricin acetyltransferase; toxin p | 98.82 | |
| 2pr1_A | 163 | Uncharacterized N-acetyltransferase YLBP; YIBP pro | 98.81 | |
| 2qml_A | 198 | BH2621 protein; structural genomics, joint center | 98.8 | |
| 2g0b_A | 198 | FEEM; N-acyl transferase, environmental DNA, prote | 98.79 | |
| 1p0h_A | 318 | Hypothetical protein RV0819; GNAT fold, acetyltran | 98.75 | |
| 2q04_A | 211 | Acetoin utilization protein; ZP_00540088.1, struct | 98.75 | |
| 1r57_A | 102 | Conserved hypothetical protein; GCN5, N-acetyltran | 98.73 | |
| 1yk3_A | 210 | Hypothetical protein RV1347C/MT1389; acyltransfera | 98.72 | |
| 2vzy_A | 218 | RV0802C; transferase, GCN5-related N-acetyltransfe | 98.72 | |
| 4ava_A | 333 | Lysine acetyltransferase; allosteric regulation, d | 98.71 | |
| 1p0h_A | 318 | Hypothetical protein RV0819; GNAT fold, acetyltran | 98.69 | |
| 3tcv_A | 246 | GCN5-related N-acetyltransferase; GRAM negative co | 98.68 | |
| 3g3s_A | 249 | GCN5-related N-acetyltransferase; ZP_00874857.1, a | 98.62 | |
| 2wpx_A | 339 | ORF14; transferase, acetyl transferase, antibiotic | 98.47 | |
| 1sqh_A | 312 | Hypothetical protein CG14615-PA; structural genomi | 98.41 | |
| 2ft0_A | 235 | TDP-fucosamine acetyltransferase; GNAT fold acetyl | 98.28 | |
| 2zw5_A | 301 | Bleomycin acetyltransferase; dimer, two domains; H | 98.28 | |
| 2zpa_A | 671 | Uncharacterized protein YPFI; RNA modification enz | 98.21 | |
| 1ro5_A | 201 | Autoinducer synthesis protein LASI; alpha-beta-alp | 98.18 | |
| 1yle_A | 342 | Arginine N-succinyltransferase, alpha chain; struc | 98.13 | |
| 1bob_A | 320 | HAT1, histone acetyltransferase; histone modificat | 98.0 | |
| 1xmt_A | 103 | Putative acetyltransferase; structural genomics, p | 97.94 | |
| 3p2h_A | 201 | AHL synthase; acyl-ACP binding, SAM binding, signa | 97.66 | |
| 1kzf_A | 230 | Acyl-homoserinelactone synthase ESAI; alpha-beta, | 97.42 | |
| 3shp_A | 176 | Putative acetyltransferase STHE_0691; PSI-biology, | 96.2 | |
| 2p0w_A | 324 | Histone acetyltransferase type B catalytic subuni; | 94.53 | |
| 3dns_A | 135 | Ribosomal-protein-alanine acetyltransferase; N-ter | 93.77 | |
| 4hkf_A | 191 | Alpha-tubulin N-acetyltransferase; tubulin acetylt | 92.23 | |
| 4b5o_A | 200 | Alpha-tubulin N-acetyltransferase; microtubules, c | 91.45 | |
| 3iwg_A | 276 | Acetyltransferase, GNAT family; structural genomic | 91.22 | |
| 3to7_A | 276 | Histone acetyltransferase ESA1; MYST family; HET: | 91.0 | |
| 2ou2_A | 280 | Histone acetyltransferase htatip; structural genom | 90.82 | |
| 2ozu_A | 284 | Histone acetyltransferase MYST3; structural genomi | 90.43 | |
| 4h6u_A | 200 | Alpha-tubulin N-acetyltransferase; tubulin acetylt | 89.96 | |
| 2pq8_A | 278 | Probable histone acetyltransferase MYST1; MOF, str | 89.26 | |
| 4gs4_A | 240 | Alpha-tubulin N-acetyltransferase; acetyl coenzyme | 89.1 | |
| 3gkr_A | 336 | FEMX; FEMX, peptidoglycan, hexapeptide, transferas | 86.06 | |
| 1iyk_A | 392 | Myristoyl-COA:protein N-myristoyltransferase; HET: | 85.54 | |
| 1iic_A | 422 | Peptide N-myristoyltransferase; HET: MYA; 2.20A {S | 85.12 | |
| 2wuu_A | 421 | N-myristoyltransferase; acyltransferase; HET: NHM; | 83.58 | |
| 2wuu_A | 421 | N-myristoyltransferase; acyltransferase; HET: NHM; | 83.32 | |
| 4b14_A | 385 | Glycylpeptide N-tetradecanoyltransferase; malaria, | 82.92 | |
| 1rxt_A | 496 | Myristoyl-, glycylpeptide N-tetradecanoyltransfera | 82.71 | |
| 3ddd_A | 288 | Putative acetyltransferase; NP_142035.1, structura | 82.21 | |
| 4b14_A | 385 | Glycylpeptide N-tetradecanoyltransferase; malaria, | 81.47 | |
| 3iu1_A | 383 | Glycylpeptide N-tetradecanoyltransferase 1; N-myri | 80.48 |
| >3d2m_A Putative acetylglutamate synthase; protein-COA-Glu ternary complex, transferase; HET: COA GLU; 2.21A {Neisseria gonorrhoeae} PDB: 2r8v_A* 3b8g_A* 2r98_A* 3d2p_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-68 Score=579.07 Aligned_cols=409 Identities=33% Similarity=0.523 Sum_probs=357.6
Q ss_pred CCCCCh-hHHHHHHHHhhhHHHhhcCCeEEEEeCCccCCCCChHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCc
Q 007903 75 YNPVED-EQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHE 153 (585)
Q Consensus 75 ~~~~~~-~~~~~~~r~a~~yi~~~r~k~iVIKlGGs~l~~~~l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~ 153 (585)
++-|.+ .+|++|||+|+|||++||++++|||+||++|+++++..++++|+.|++.|+++||||||||+++.++++++++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~yi~~~~~~~iViK~GG~~l~~~~~~~~~~~i~~l~~~g~~vvlVhggg~~~~~~~~~~~~~ 97 (456)
T 3d2m_A 18 GSHMNAPDSFVAHFREAAPYIRQMRGTTLVAGIDGRLLEGGTLNKLAADIGLLSQLGIRLVLIHGAYHFLDRLAAAQGRT 97 (456)
T ss_dssp -------CCHHHHHHHHHHHHHHHTTCEEEEEECGGGGTSTHHHHHHHHHHHHHHTTCEEEEEECCHHHHHTTTTTTTCC
T ss_pred cccCCchhHHHHHHHHhHHHHHHhcCCEEEEEEChHHhcCchHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHCCCC
Confidence 444544 6799999999999999999999999999999987799999999999999999999999999999999999999
Q ss_pred ccccCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcce
Q 007903 154 AKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGAT 233 (585)
Q Consensus 154 ~~~~~g~rvt~~~~l~~~~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~ 233 (585)
+++.+|.|+|++++|+++.+++|++|+.+++.| . +|++....++++++.|++|+++++.++.+++|+|++
T Consensus 98 ~~~~~g~r~t~~~~l~~~~~~~G~~~~~l~~~l---------~-~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~g~~ 167 (456)
T 3d2m_A 98 PHYCRGLRVTDETSLGQAQQFAGTVRSRFEAAL---------C-GSVSGFARAPSVPLVSGNFLTARPIGVIDGTDMEYA 167 (456)
T ss_dssp CCCGGGCCCBCHHHHHHHHHHHHHHHHHHHHHH---------H-TC--------CCCEECCSCEEEEECCEETTEECBTB
T ss_pred CEeeCCeecCCHHHHHHHHHHHhHHHHHHHHHH---------h-cccccCCCccceeeccCcEEEEEEcccccCcccCce
Confidence 999999999999999998555699999988864 5 676632234899999999999999887788899999
Q ss_pred eeEEEecHHHHHHHHcCCCeEEEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC-CCCcccccccHHHH
Q 007903 234 GEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-ESGHLIRFLTLQEA 312 (585)
Q Consensus 234 G~v~~v~~~~I~~lL~~G~IPVi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~-~~~~lI~~it~~e~ 312 (585)
|+|+.+|.+.|++||++|.|||++|++.+.+|+++|+|+|++|+++|.+|+||+|||+|||||++ .++++|++++.+|+
T Consensus 168 g~v~~v~~~~i~~lL~~g~ipIi~~~~~~~~g~~~~~~~D~~Aa~lA~~l~Ad~li~lTdvdGv~~~~~~~i~~i~~~e~ 247 (456)
T 3d2m_A 168 GVIRKTDTAALRFQLDAGNIVWMPPLGHSYGGKTFNLDMVQAAASVAVSLQAEKLVYLTLSDGISRPDGTLAETLSAQEA 247 (456)
T ss_dssp EEEEEECHHHHHHHHHTTCEEEECSEEECTTSCEEECCHHHHHHHHHHHHTCSEEEEEESSSSCBCTTSCBCSEEEHHHH
T ss_pred eeEEEECHHHHHHHHHCCCeEEECCcccCCCCCEEEECHHHHHHHHHHHcCCCEEEEEECCccccCCCCCccccCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999984 57999999999988
Q ss_pred HHHHHhhchhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCccccccccccccc
Q 007903 313 DSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQE 392 (585)
Q Consensus 313 ~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~ 392 (585)
++++..+ .| |
T Consensus 248 ~~~~~~g-------------------------------------------------------~g-g-------------- 257 (456)
T 3d2m_A 248 QSLAEHA-------------------------------------------------------AS-E-------------- 257 (456)
T ss_dssp HHHHTTC-------------------------------------------------------CH-H--------------
T ss_pred HHHHhcc-------------------------------------------------------CC-C--------------
Confidence 8775321 13 4
Q ss_pred ccccccCcHHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeeccccccccccccccCHHHHHHHHHHHHHc
Q 007903 393 RLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVES 472 (585)
Q Consensus 393 ~~~~~~~m~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~~d~~~~IR~at~~D~~~I~~Li~~~~~~ 472 (585)
|.+||+||..|++.|+++++|+|++.++.|+.++|++++.||+|.++.+++||+++++|++.+.+++......
T Consensus 258 -------m~~Kl~aa~~a~~~gv~~v~I~~~~~~~~ll~~l~~~~~~GT~i~~~~~~~IR~a~~~D~~~i~~l~~~~~~~ 330 (456)
T 3d2m_A 258 -------TRRLISSAVAALEGGVHRVQILNGAADGSLLQELFTRNGIGTSIAKEAFVSIRQAHSGDIPHIAALIRPLEEQ 330 (456)
T ss_dssp -------HHHHHHHHHHHHHTTCSEEEEEETTSTTHHHHHHHCSSCSSEEEECCCCCEEEECCGGGHHHHHHHHHHHHHH
T ss_pred -------hHHHHHHHHHHHHhCCCEEEEecCcCCchHHHHHHhhcCCceeeecccceeeCCCCHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999988999999999999999998999999999999999998887777
Q ss_pred cccccCCHHHHHhccCeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCc
Q 007903 473 GALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHIS 552 (585)
Q Consensus 473 ~~~~~~~~e~l~~~i~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~ 552 (585)
.+..+|+.+.+...+..+++++.++++|||+.+....+++.++|..++|+|+|||+|+|++||++++ +++++.++.
T Consensus 331 ~~~~~~~~~~~~~~l~~~~va~~~g~iVG~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~~~----~~a~~~g~~ 406 (456)
T 3d2m_A 331 GILLHRSREYLENHISEFSILEHDGNLYGCAALKTFAEADCGEIACLAVSPQAQDGGYGERLLAHII----DKARGIGIS 406 (456)
T ss_dssp TSSCCCCHHHHHHHGGGEEEEEETTEEEEEEEEEECSSTTEEEEEEEEECGGGTTSSHHHHHHHHHH----HHHHHTTCC
T ss_pred CCCccCCHHHHHHHHhhEEEEEECCEEEEEEEEEecCCCCEEEEEEEEECHHHcCCCHHHHHHHHHH----HHHHHcCCC
Confidence 7777888888888887899999999999999998654567899999999999999999999999999 888888887
Q ss_pred ccCccceeccc-ccccccCeeecCc
Q 007903 553 TNGFPFLRGRT-HSYYRLKFNCSSK 576 (585)
Q Consensus 553 ~~g~~~~~~~a-~~YYrlGF~~~~~ 576 (585)
...+. ...+ ++|.++||+..+.
T Consensus 407 ~i~l~--N~~a~~fY~k~GF~~~~~ 429 (456)
T 3d2m_A 407 RLFAL--STNTGEWFAERGFQTASE 429 (456)
T ss_dssp EEEEE--ESSCHHHHHTTTCEEECG
T ss_pred EEEEE--cHHHHHHHHHCCCEEeCc
Confidence 65332 3344 4455899998765
|
| >3s6g_A N-acetylglutamate kinase / N-acetylglutamate SYNT; synthase, transferase; HET: COA; 2.67A {Maricaulis maris} PDB: 3s7y_A 3s6h_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-56 Score=485.39 Aligned_cols=347 Identities=22% Similarity=0.289 Sum_probs=303.1
Q ss_pred HHHHhhhHHHhhcC----CeEEEEeCCccCCCCChHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCcc
Q 007903 86 WFREAWPYLWAHRG----GTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYR 161 (585)
Q Consensus 86 ~~r~a~~yi~~~r~----k~iVIKlGGs~l~~~~l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~r 161 (585)
.+||++|||++|++ +++|||+||+++++ .+++++++|+.|+..|.++||||||||+++..++++|++++|++|+|
T Consensus 41 ~~re~~pyi~~f~~~~~~~~iViK~GGsv~~~-~l~~~a~dI~~l~~~G~~~VvVHGgG~~i~~~l~~~gi~~~f~~G~R 119 (460)
T 3s6g_A 41 DGKEIREYLHRFSGIDQERFAVIKVGGAVIQD-DLPGLASALAFLQTVGLTPVVVHGGGPQLDAALEAADIPTERVDGLR 119 (460)
T ss_dssp THHHHHHHHHHTSSSCGGGSEEEEECHHHHHH-CHHHHHHHHHHHHHHTCCCEEEECCHHHHHHHHHHHSCCCCCCSSSC
T ss_pred CHHHHHHHHHHHhCCCCCCEEEEEEChHHhhh-HHHHHHHHHHHHHHCCCcEEEEECCChHHHHHHHHcCCCccccCCcc
Confidence 35699999999998 89999999998775 48999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecH
Q 007903 162 ITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDV 241 (585)
Q Consensus 162 vt~~~~l~~~~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~ 241 (585)
+|++++|+++.+++|++|..|+++ |.++|++ ++++++ ++ +++++ +++.|||++|+|+.+|+
T Consensus 120 vTd~~~l~vv~~~lg~vn~~lv~a---------L~~~G~~----Av~lsg--~~-~~a~~---~~~~d~g~~G~I~~v~~ 180 (460)
T 3s6g_A 120 VTRDEAMPIIRDTLTQANLALVDA---------IRDAGGR----AAAVPR--GV-FEADI---VDADKLGRVGEPRHIHL 180 (460)
T ss_dssp CBCTTTHHHHHHHHHHHHHHHHHH---------HHHTTCC----EEEECS--SS-EEEEE---SCTTTTBSEEEEEEECC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHH---------HHhCCCC----ceEEec--Ce-EEEEE---ecCcccCccCcceEEcH
Confidence 999999999866678999999886 4788987 788875 34 46664 56789999999999999
Q ss_pred HHHHHHHcCCCeEEEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeeccccc-CCCCcccccccHH-HHHHHHHhh
Q 007903 242 TRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPIL-DESGHLIRFLTLQ-EADSLIRQR 319 (585)
Q Consensus 242 ~~I~~lL~~G~IPVi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl-~~~~~lI~~it~~-e~~~li~~~ 319 (585)
+.|+.+|++|.|||++|++.+.+|+++|+|+|++|++||.+|+||+|||+|||+|+ ++++++|++++.. |++.++..+
T Consensus 181 ~~i~~lL~~g~IpVi~p~g~~~~G~~~~i~~D~~Aa~lA~~L~Ad~LiilTdv~Gv~~~~~~lI~~i~~~~e~~~l~~~~ 260 (460)
T 3s6g_A 181 DLVGSAARAGQAAILACLGETPDGTLVNINADVAVRALVHALQPYKVVFLTGTGGLLDEDGDILSSINLATDFGDLMQAD 260 (460)
T ss_dssp HHHHHHHHTTCEEEEECEEECTTCCEEEECHHHHHHHHHHHHCCSEEEEECSSCSCBCTTSSBCCEEEHHHHHHHHHHCS
T ss_pred HHHHHHHHCCcEEEEECceECCCCcEEecCHHHHHHHHHHHcCCCEEEEEeCCccccCCCCeecceeCcHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999998 4689999999986 777776431
Q ss_pred chhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccC
Q 007903 320 VKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNG 399 (585)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~ 399 (585)
. + +| |
T Consensus 261 ~-----------------------------~------------------------tG-G--------------------- 265 (460)
T 3s6g_A 261 W-----------------------------V------------------------NG-G--------------------- 265 (460)
T ss_dssp S-----------------------------S------------------------CH-H---------------------
T ss_pred C-----------------------------C------------------------CC-c---------------------
Confidence 1 1 24 4
Q ss_pred cHHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeeccccccccccccc---cCHHHHHHHHHHHHHccccc
Q 007903 400 YLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKV---TDLSGIKQIIQPLVESGALV 476 (585)
Q Consensus 400 m~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~~d~~~~IR~at~---~D~~~I~~Li~~~~~~~~~~ 476 (585)
|.+||+||..+++ |+++++|++++.+++|+.|||+++++||+|.++ +.+|+++. .|++.|.+|++++.. +.+.
T Consensus 266 M~~Kl~aa~~a~~-gv~~v~iv~g~~~~~Ll~eLft~~g~GT~i~~~--e~ir~a~~~~~~D~~~L~~LI~~~~~-~~Lv 341 (460)
T 3s6g_A 266 MRLKLEEIKRLLD-DLPLSSSVSITRPSELARELFTHAGSGTLIRRG--ERMVATDDKSSLDLGRLDNLVKAAFG-RPAV 341 (460)
T ss_dssp HHHHHHHHHHHHH-TSCTTCEEEEECGGGHHHHHHSSCCSSEEEECC--CCEEEESCGGGSCHHHHHHHHHHHSS-SCBC
T ss_pred HHHHHHHHHHHHh-CCCcEEEEEeCCCcHHHHHHhcCCCCceEEEcC--CceEEeccCCcCCHHHHHHHHHHHcC-cccH
Confidence 9999999888876 676799999999999999999999999999988 67888888 999999999988766 4443
Q ss_pred cCCHHHHH-hccCeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCCcCCcHHHHHHHHHH
Q 007903 477 RRTDEELL-KALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCI 539 (585)
Q Consensus 477 ~~~~e~l~-~~i~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~ 539 (585)
.+.++ ..+..+++.+.++ +.++++++++.+++.+|+|+|+|||.|+|..|+++++
T Consensus 342 ---~~~le~~~i~~~~v~e~~~-----aaaiv~~~~~~aeL~kfaV~~~~~g~g~gd~l~~~i~ 397 (460)
T 3s6g_A 342 ---EGYWDRLRVDRAFVTESYR-----AAAITTRLDGWVYLDKFAVLDDARGEGLGRTVWNRMV 397 (460)
T ss_dssp ---TTHHHHCCCSEEEEETTSS-----EEEEEEEETTEEEEEEEEECHHHHHHTHHHHHHHHHH
T ss_pred ---HHHHhhcCcceEEEecCCC-----EEEEEecCCCCeEEEEEEEChhhhcCCHHHHHHHHHH
Confidence 34455 4568899888877 2233234567999999999999999999999999999
|
| >4ab7_A Protein Arg5,6, mitochondrial; transferase, arginine biosynthesis, amino acid kinase domain GCN5-related acetyltransferase, GNAT; HET: NLG; 3.25A {Saccharomyces cerevisiae} PDB: 3zzi_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-52 Score=452.62 Aligned_cols=354 Identities=21% Similarity=0.286 Sum_probs=283.1
Q ss_pred HHHHHHhhhHHHhhcC----CeEEEEeCCccCCCCChHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCC
Q 007903 84 VKWFREAWPYLWAHRG----GTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGR 159 (585)
Q Consensus 84 ~~~~r~a~~yi~~~r~----k~iVIKlGGs~l~~~~l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g 159 (585)
+...||+.|||++||+ +++|||+||+++++ .++.++++|++|+..|.++||||||||+++++++++|++++|++|
T Consensus 29 ~~~~re~~~yl~~F~~~~~~~~iVIK~GGsv~~~-~l~~la~dI~~l~~~G~~~VvVHGgG~~i~~~l~~~gi~~~f~~G 107 (464)
T 4ab7_A 29 ISTKREVEQYLKYFTSVSQQQFAVIKVGGAIISD-NLHELASCLAFLYHVGLYPIVLHGTGPQVNGRLEAQGIEPDYIDG 107 (464)
T ss_dssp --------------------CCEEEEECHHHHHH-CHHHHHHHHHHHHHTTCCCEEEECCCHHHHHHHHHTTCCCCEETT
T ss_pred cCChhhHHHHHHHHhCCCCCceEEEEECHHHhhc-hHHHHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHcCCCccccCC
Confidence 3346778888888887 89999999999875 489999999999999999999999999999999999999999999
Q ss_pred ccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEe
Q 007903 160 YRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKV 239 (585)
Q Consensus 160 ~rvt~~~~l~~~~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v 239 (585)
+|+|++++|+++.++++++|..|+++ |+++|++ ++++++ +++++++ ++++|||++|+|+.+
T Consensus 108 ~RvTd~~tl~vv~mv~~~vn~~lv~~---------L~~~G~~----Avglsg---g~~~a~~---~~~~d~g~vG~I~~v 168 (464)
T 4ab7_A 108 IRITDEHTMAVVRKCFLEQNLKLVTA---------LEQLGVR----ARPITS---GVFTADY---LDKDKYKLVGNIKSV 168 (464)
T ss_dssp EECBCHHHHHHHHHHHHHHHHHHHHH---------HHHTTCC----EEEECS---SSEEEEE---SCTTTTBSBEEEEEE
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHHH---------HHhCCCC----eEEECC---CcEEEEe---cCccccCCcCccccc
Confidence 99999999999976778999999885 4789987 888874 4567776 467899999999999
Q ss_pred cHHHHHHHHcCCCeEEEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC--CCCcccccccHHH-HHHHH
Q 007903 240 DVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD--ESGHLIRFLTLQE-ADSLI 316 (585)
Q Consensus 240 ~~~~I~~lL~~G~IPVi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~--~~~~lI~~it~~e-~~~li 316 (585)
|++.|+.+|+.|+|||++|++++.+|+++|+|+|++|++||.+|+||+|||+|||||++ +++++|++++.+| ++.++
T Consensus 169 ~~~~I~~lL~~G~IPVi~~~g~~~~G~~~ni~~D~~Aa~lA~~L~Ad~Li~lTdV~GV~~~~~~~lI~~it~~e~~~~li 248 (464)
T 4ab7_A 169 TKEPIEASIKAGALPILTSLAETASGQMLNVNADVAAGELARVFEPLKIVYLNEKGGIINGSTGEKISMINLDEEYDDLM 248 (464)
T ss_dssp CCHHHHHHHHTTCEEEEESEEECTTCBEEECCHHHHHHHHHHHHCCSEEEEEESSCSEECTTTCCEECEEEHHHHHHHHH
T ss_pred CHHHHHHHHHCCcEEEEcCCcCCCCCCEEEecHHHHHHHHHHHcCCCEEEEEecccccccCCCCcCCcccCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999984 3799999999875 66665
Q ss_pred HhhchhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCccccccccccccccccc
Q 007903 317 RQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSR 396 (585)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~ 396 (585)
.++. + +| |
T Consensus 249 ~~~~-----------------------------~------------------------tg-G------------------ 256 (464)
T 4ab7_A 249 KQSW-----------------------------V------------------------KY-G------------------ 256 (464)
T ss_dssp TCSS-----------------------------C------------------------CH-H------------------
T ss_pred hcCC-----------------------------C------------------------CC-c------------------
Confidence 3211 1 23 4
Q ss_pred ccCcHHHHHHHHHHHHc---CCCeEEEecCccchhhHHHHHhcCCCceeeccccccccccccccCHHHHHHHHHHHHHcc
Q 007903 397 LNGYLSELAAAAFVCRR---GVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESG 473 (585)
Q Consensus 397 ~~~m~~kl~aa~~a~~~---Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~~d~~~~IR~at~~D~~~I~~Li~~~~~~~ 473 (585)
|.|||+|+..|++. | ..++|++ ++.|+.|+|+++++||+|.++ |+.+|.++.+|++.+.+|.+.+.+..
T Consensus 257 ---M~pKl~aa~aa~~~v~~g-~~v~I~~---~~~ll~eLft~~g~GT~I~~~-~~~~r~a~~~dv~~~~~L~~lL~~s~ 328 (464)
T 4ab7_A 257 ---TKLKIREIKELLDYLPRS-SSVAIIN---VQDLQKELFTDSGAGTMIRRG-YKLVKRSSIGEFPSADALRKALQRDA 328 (464)
T ss_dssp ---HHHHHHHHHHHHTTSCTT-CEEEEEE---STTHHHHTTSSSTTSEEEECC-CCCEEESSGGGSSCHHHHHHHHTTST
T ss_pred ---HHHHHHHHHHHHHhcccC-cEEEEec---ChHHHHHHhcCCCCceEEecC-ccccccCChhhhcCHHHHHHHHHhcc
Confidence 99999955444443 5 5699998 678899999999999999999 99999999999877777765555432
Q ss_pred c--cccCCHHHHHhcc-CeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCCcCCcHHHHHHHHHH
Q 007903 474 A--LVRRTDEELLKAL-DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCI 539 (585)
Q Consensus 474 ~--~~~~~~e~l~~~i-~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~ 539 (585)
. .-..+.+.+.+.+ ...+.+..++..-|++.+. .++..+++..|+|.|+.||.|++..+++.+.
T Consensus 329 ~~~~~~~~v~~y~~~L~~~~~~iy~d~~y~~~AIv~--~~~~~~~LdkFav~~~~~~~gv~d~vf~~i~ 395 (464)
T 4ab7_A 329 GISSGKESVASYLRYLENSDFVSYADEPLEAVAIVK--KDTNVPTLDKFVCSDAAWLNNVTDNVFNVLR 395 (464)
T ss_dssp TTSSSSSCHHHHHHHHHTSCEEEEECTTCSEEEEEE--CSSSSCEEEEEEECHHHHHTTHHHHHHHHHH
T ss_pred cccchhhhHHHHHHHhhcCceEEEEeCCceEEEEEe--cCCCCEEEEEEEEcccccccCHHHHHHHHHH
Confidence 1 1122455555554 2233444566677777665 3567899999999999999999999999999
|
| >2buf_A Acetylglutamate kinase; acetyglutamate kinase, ADP, arginine biosynthesis, FEED-BACK inhibition, hexamer, transferase; HET: NLG ADP; 2.95A {Pseudomonas aeruginosa} SCOP: c.73.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-51 Score=424.11 Aligned_cols=279 Identities=28% Similarity=0.462 Sum_probs=254.0
Q ss_pred hhHHHHHHHHhhhHHHhhcCCeEEEEeCCccCCCCC-hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccC
Q 007903 80 DEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLG 158 (585)
Q Consensus 80 ~~~~~~~~r~a~~yi~~~r~k~iVIKlGGs~l~~~~-l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~ 158 (585)
+.+|++|||+|+|||++||++++|||+||+++++++ +..++++|+.|++.|+++||||||||+++.++++++++++|.+
T Consensus 7 ~~~~~~~~~~a~pyi~~~~~k~iVIKlGGs~l~~~~~~~~~~~~i~~l~~~G~~vVlVhGgG~~i~~~~~~~g~~~~~~~ 86 (300)
T 2buf_A 7 AAQVAKVLSEALPYIRRFVGKTLVIKYGGNAMESEELKAGFARDVVLMKAVGINPVVVHGGGPQIGDLLKRLSIESHFID 86 (300)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSSHHHHHHHHHHHHHHHTTCEEEEEECCCHHHHHHHHHTTCCCCBSS
T ss_pred hHHHHHHHHHHhHHHHHhcCCeEEEEECchhhCCchHHHHHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHcCCCccccC
Confidence 458999999999999999999999999999999876 7899999999999999999999999999999999999999999
Q ss_pred CccCCCHHHHHHH-HHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeecccc--c-------cc
Q 007903 159 RYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVV--D-------GV 228 (585)
Q Consensus 159 g~rvt~~~~l~~~-~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~--~-------g~ 228 (585)
|+|+|++++|+.+ ++++|++|+.|+++| .++|++ ++++++.|++|+.+++.+.. + ++
T Consensus 87 g~rvt~~~~l~~~~~~~~G~~~~~l~~~l---------~~~g~~----a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 153 (300)
T 2buf_A 87 GMRVTDAATMDVVEMVLGGQVNKDIVNLI---------NRHGGS----AIGLTGKDAELIRAKKLTVTRQTPEMTKPEII 153 (300)
T ss_dssp SSBCBCHHHHHHHHHHHHHTHHHHHHHHH---------HHTTCC----EEEEEETGGGCEEEEECCCCCC--------CC
T ss_pred CeecCCHHHHHHHHHHHHHHHHHHHHHHH---------HhCCCC----EEEecCCCCCeeeeeeccccccchhhcccccc
Confidence 9999999999997 566799999998864 778887 79999999999999876432 2 34
Q ss_pred cCcceeeEEEecHHHHHHHHcCCCeEEEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC-CCCcccccc
Q 007903 229 DYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-ESGHLIRFL 307 (585)
Q Consensus 229 d~g~~G~v~~v~~~~I~~lL~~G~IPVi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~-~~~~lI~~i 307 (585)
|++++|+|+.+|.+.|+.||+.|.|||++|++++++|+.+|+|+|++|+++|.+|+||+|+|+|||||++ .++++|+++
T Consensus 154 d~g~~g~v~~v~~~~i~~lL~~g~IpVi~~v~~~~~G~~~~i~~D~~Aa~lA~~l~Ad~li~lTdVdGv~~~~a~~i~~i 233 (300)
T 2buf_A 154 DIGHVGEVTGVNVGLLNMLVKGDFIPVIAPIGVGSNGESYNINADLVAGKVAEALKAEKLMLLTNIAGLMDKQGQVLTGL 233 (300)
T ss_dssp CCBSBEEEEEECHHHHHHHHHTTCEEEEEEEEECTTSCEEECCHHHHHHHHHHHHTCSEEEEEESSSCCBCTTSCBCCEE
T ss_pred cCCcceeEEEECHHHHHHHHHCCCEEEEcCceeCCCCCEEEECHHHHHHHHHHHcCCCEEEEEeCCCCeECCCCcChhhC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999985 469999999
Q ss_pred cHHHHHHHHHhhchhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccc
Q 007903 308 TLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFA 387 (585)
Q Consensus 308 t~~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a 387 (585)
+.+|+++++..+. + +| |
T Consensus 234 ~~~e~~~~~~~~~-----------------------------~------------------------~g-g--------- 250 (300)
T 2buf_A 234 STEQVNELIADGT-----------------------------I------------------------YG-G--------- 250 (300)
T ss_dssp CHHHHHHHHHTTC-----------------------------S------------------------CT-T---------
T ss_pred CHHHHHHHHHcCC-----------------------------C------------------------CC-c---------
Confidence 9999888864321 1 24 5
Q ss_pred cccccccccccCcHHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeeccc
Q 007903 388 IGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446 (585)
Q Consensus 388 ~~~~~~~~~~~~m~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~~d 446 (585)
|.+||+||..|++.|+++++|+||..++.||.++|++++.||+|.++
T Consensus 251 ------------M~~Kv~aa~~a~~~gv~~v~I~~g~~~~~ll~~~~~~~~~GT~i~~~ 297 (300)
T 2buf_A 251 ------------MLPKIRCALEAVQGGVTSAHIIDGRVPNAVLLEIFTDSGVGTLISNR 297 (300)
T ss_dssp ------------HHHHHHHHHHHHHTTCSEEEEEETTSTTHHHHHHSSTTCCSEEEECC
T ss_pred ------------cHHHHHHHHHHHHhCCCEEEEeeCCCCchHHHHHhcCCCCceEEEeC
Confidence 99999999999999999999999999999889999999999999765
|
| >3s6k_A Acetylglutamate kinase; synthase, transferase; 2.80A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-54 Score=468.55 Aligned_cols=348 Identities=23% Similarity=0.324 Sum_probs=297.0
Q ss_pred HHHhhhHHHhhcC----CeEEEEeCCccCCCCChHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCccC
Q 007903 87 FREAWPYLWAHRG----GTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRI 162 (585)
Q Consensus 87 ~r~a~~yi~~~r~----k~iVIKlGGs~l~~~~l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rv 162 (585)
+||++|||++|++ +++|||+||+++++ .++.++++|+.|+..|.++||||||||+++..++++|++++|++|+|+
T Consensus 45 ~re~~pyi~~f~~~~~~~~iViK~GG~v~~~-~l~~va~dI~~l~~~G~~~VvVHGgg~~i~~~l~~~gi~~~f~~G~Rv 123 (467)
T 3s6k_A 45 AKEISQYLKRFSQLDAKRFAVVKVGGAVLRD-DLEALTSSLSFLQEVGLTPIVLHGAGPQLDAELSAAGIEKQTVNGLRV 123 (467)
T ss_dssp HHHHHHHHHSSSSSCSTTSCCCCCCHHHHTT-CCHHHHHHHHHHHTTSCCCCCCCCCCHHHHHHHHTTSCCCCCCSSSCC
T ss_pred HHHHHHHHHHHhCCCCCcEEEEEEChHHhhh-HHHHHHHHHHHHHHCCCcEEEEECCChHHHHHHHHcCCCccccCCccC
Confidence 4599999999998 89999999998775 489999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHH
Q 007903 163 TDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVT 242 (585)
Q Consensus 163 t~~~~l~~~~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~ 242 (585)
|++++|+++.+++|++|..|+++ |+++|++ ++++++ +.+.++ ++++.|||++|+|+.+|.+
T Consensus 124 Td~~~l~vv~~~~g~vn~~Lv~a---------L~~~G~~----Av~lsg---~~~~a~---~~~~~d~g~~G~I~~v~~~ 184 (467)
T 3s6k_A 124 TSPHALAIVRKVFQASNLKLVEA---------LQQNGAR----ATSITG---GVFEAE---YLNRDTYGLVGEVKAVNLA 184 (467)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHH---------HHHHTCC----BCCCCS---SSBCCC---BSCSSSSBSBBCCCCBCCH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHH---------HHhCCCC----ceEEcC---ccEEEE---eccCcccCccceEEEEcHH
Confidence 99999999966678999999886 4788987 677764 334555 3577899999999999999
Q ss_pred HHHHHHcCCCeEEEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeeccccc-CCCCcccccccHH-HHHHHHHhhc
Q 007903 243 RMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPIL-DESGHLIRFLTLQ-EADSLIRQRV 320 (585)
Q Consensus 243 ~I~~lL~~G~IPVi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl-~~~~~lI~~it~~-e~~~li~~~~ 320 (585)
.|+.+|++|.|||++|++.+.+|+++|+|+|++|++||.+|+||+|||+|||+|+ ++++++|++++.. |++.++..+
T Consensus 185 ~i~~lL~~g~IpVi~pvg~~~~G~~~~i~~D~~Aa~lA~~L~Ad~LiilTdv~Gv~~~~~~lI~~i~~~~e~~~l~~~~- 263 (467)
T 3s6k_A 185 PIEASLQAGSIPVITSLGETPSGQILNVNADFAANELVQELQPYKIIFLTGTGGLLDAEGKLIDSINLSTEYDHLMQQP- 263 (467)
T ss_dssp HHHTHHHHTCBCCCCSCCCCSSSCCCBCCHHHHHHHHHHHHCCSSCCCCCSSCSCCCSSCCCCCCCCTTTTTHHHHTSS-
T ss_pred HHHHHHHCCCEEEEECceECCCCcEEecCHHHHHHHHHHhcCCCEEEEEecccceeCCCCCCccccChHHHHHHHHhcC-
Confidence 9999999999999999999999999999999999999999999999999999998 4689999999985 677765321
Q ss_pred hhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccCc
Q 007903 321 KQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGY 400 (585)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m 400 (585)
..+| | |
T Consensus 264 ----------------------------------------------------~~tG-G---------------------M 269 (467)
T 3s6k_A 264 ----------------------------------------------------WING-G---------------------M 269 (467)
T ss_dssp ----------------------------------------------------SCCS-H---------------------H
T ss_pred ----------------------------------------------------CCCC-c---------------------h
Confidence 1134 4 9
Q ss_pred HHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeeccccccccccccc---cCHHHHHHHHHHHHHcccccc
Q 007903 401 LSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKV---TDLSGIKQIIQPLVESGALVR 477 (585)
Q Consensus 401 ~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~~d~~~~IR~at~---~D~~~I~~Li~~~~~~~~~~~ 477 (585)
.+||+||..+++ |+.+++|++++.+++|+.+||+++++||+|.++ +.+|.++. .|++.|.+|+++.+. ..+.
T Consensus 270 ~~Kl~aa~~a~~-gv~~~~iv~g~~~~~Ll~eLft~~g~GT~i~~~--e~ir~a~~~~~~D~~~L~~LI~~~~~-~~Lv- 344 (467)
T 3s6k_A 270 RVKIEQIKDLLD-RLPLESSVSITRPADLAKELFTHKGSGTLVRRG--ERVLRATSWDELDLPRLTSLIESSFG-RTLV- 344 (467)
T ss_dssp HHHHHHHHHHHT-TSCSSCCBCCCCTTTHHHHHHSSCTTSCCBCCC--CCEEEESSTTSSCHHHHHHHHHHHSS-SCCC-
T ss_pred HHHHHHHHHHHh-CCCcEEEEEeCCchHHHHHHhcCCCcceEEeCC--CceEEccccCcCCHHHHHHHHHHhhc-cchH-
Confidence 999999888776 676799999999999999999999999999987 56888887 899999999988665 3332
Q ss_pred CCHHHHH-hccCeEEEEEECCeEEEEEEEeee---ccCCceEEeeEEEccCCcCCcHHHHHHHHHH
Q 007903 478 RTDEELL-KALDSFYVVEREGQIIACAALFPF---FKEKCGEVAAIGVSPECRGQGQGDKLLGLCI 539 (585)
Q Consensus 478 ~~~e~l~-~~i~~~~Va~~dg~IVG~~~l~~~---~~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~ 539 (585)
.+.++ ..+..+++.+.++ |.+.+.+. ..+..+++.+|+|+|+|||.|+|..|++++.
T Consensus 345 --~~yle~~~i~~~~v~e~~~---aaaiv~~e~~~~~~~~~~L~kfaV~~~~~g~g~~d~l~~~i~ 405 (467)
T 3s6k_A 345 --PDYFSNTKLLRAYVSENYR---AAVILTDEGMLGASALIYLDKFAVLDDAQGEGLGRAVWNVMR 405 (467)
T ss_dssp --TTCTTTCCCSEEEEETTSS---CEEEEEEECSSTTCSEEEEEEECCCHHHHTTTSHHHHHHHHT
T ss_pred --HHHHhccCceEEEEecCCc---EEEEEeccccCCCCCCeEEEEEEEchhhhcCCHHHHHHHHHH
Confidence 23333 3457788887776 33333321 1257899999999999999999999999998
|
| >2ap9_A NAG kinase, acetylglutamate kinase, AGK; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.80A {Mycobacterium tuberculosis} SCOP: c.73.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-51 Score=424.78 Aligned_cols=280 Identities=27% Similarity=0.374 Sum_probs=255.7
Q ss_pred CChhHHHHHHHHhhhHHHhhcCCeEEEEeCCccCCCCC-hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccc
Q 007903 78 VEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKY 156 (585)
Q Consensus 78 ~~~~~~~~~~r~a~~yi~~~r~k~iVIKlGGs~l~~~~-l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~ 156 (585)
+.+.+|++|||+|+|||++||++++|||+||+++++++ ++.++++|+.|++.|+++||||||||+++.+++++++++++
T Consensus 4 ~~~~~~~~~~~~a~pyi~~~~~k~iViKlGGs~l~~~~~~~~~~~~i~~l~~~G~~vViVhGgG~~i~~~~~~~~~~~~~ 83 (299)
T 2ap9_A 4 LPTHIKAQVLAEALPWLKQLHGKVVVVKYGGNAMTDDTLRRAFAADMAFLRNCGIHPVVVHGGGPQITAMLRRLGIEGDF 83 (299)
T ss_dssp SCHHHHHHHHHHHHHHHHHHTTCEEEEEECTHHHHSHHHHHHHHHHHHHHHTTTCEEEEEECCSHHHHHHHHHHTCCCCC
T ss_pred CChhhHHHHHHHHHHHHHHhCCCeEEEEECchhhCCchHHHHHHHHHHHHHHCCCcEEEEECCcHHHHHHHHHcCCcccc
Confidence 45789999999999999999999999999999999865 78999999999999999999999999999999999999999
Q ss_pred cCCccCCCHHHHHHH-HHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccc---cccccCcc
Q 007903 157 LGRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGV---VDGVDYGA 232 (585)
Q Consensus 157 ~~g~rvt~~~~l~~~-~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~---~~g~d~g~ 232 (585)
.+|+|+|++++++++ ++++|++|+.+++.| +++|++ ++++++.|+++++++++++ .+++|+||
T Consensus 84 ~~g~R~t~~~~l~~~~~~~~G~l~~~l~~~L---------~~~g~~----av~lt~~d~~~~~~~~~~~~~~~~~~d~g~ 150 (299)
T 2ap9_A 84 KGGFRVTTPEVLDVARMVLFGQVGRELVNLI---------NAHGPY----AVGITGEDAQLFTAVRRSVTVDGVATDIGL 150 (299)
T ss_dssp SSSSCCBCHHHHHHHHHHHHHTHHHHHHHHH---------TTSSSC----EEEEETTGGGCEEEEECCBCSSSCCBCCBS
T ss_pred cCCcccCCHHHHHHHHHHHhhHHHHHHHHHH---------HhCCCC----ceEechhHCCEEEEEecccccccccCCCCc
Confidence 999999999999987 667999999988765 668877 7999999999999988764 24679999
Q ss_pred eeeEEEecHHHHHHHHcCCCeEEEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC---C-CCccccccc
Q 007903 233 TGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD---E-SGHLIRFLT 308 (585)
Q Consensus 233 ~G~v~~v~~~~I~~lL~~G~IPVi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~---~-~~~lI~~it 308 (585)
+|+|+.++.+.|++||+.|+|||++|++.+++|+.+|+|+|++|+.+|.+|+||+|+|+|||||++ | ++++|++++
T Consensus 151 ~g~v~~v~~~~i~~lL~~g~IpVv~~v~~~~~G~~~~l~~D~~Aa~lA~~l~Ad~liilTDVdGV~~~dP~~~~~i~~is 230 (299)
T 2ap9_A 151 VGDVDQVNTAAMLDLVAAGRIPVVSTLAPDADGVVHNINADTAAAAVAEALGAEKLLMLTDIDGLYTRWPDRDSLVSEID 230 (299)
T ss_dssp EEEEEEECHHHHHHHHHTTCEEEEESEEECTTCCEEEECHHHHHHHHHHHTTCSEEEEEESSSSEETTTTCTTCEESEEE
T ss_pred ceeEEEecHHHHHHHHhCCCeEEECCeeECCCCCEEEECHHHHHHHHHHHcCCCEEEEEeCChhhhcCCCCCCcChhhcC
Confidence 999999999999999999999999999999999999999999999999999999999999999983 3 589999999
Q ss_pred HHHHHHHHHhhchhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCccccccccc
Q 007903 309 LQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAI 388 (585)
Q Consensus 309 ~~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~ 388 (585)
.+|+++++. +.+| |
T Consensus 231 ~~e~~~l~~-------------------------------------------------------~~~g-g---------- 244 (299)
T 2ap9_A 231 TGTLAQLLP-------------------------------------------------------TLEL-G---------- 244 (299)
T ss_dssp HHHHHHHGG-------------------------------------------------------GSCT-T----------
T ss_pred HHHHHHHHH-------------------------------------------------------hhcC-c----------
Confidence 998877742 1235 5
Q ss_pred ccccccccccCcHHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeecccc
Q 007903 389 GGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDL 447 (585)
Q Consensus 389 ~~~~~~~~~~~m~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~~d~ 447 (585)
|.+|++||..|++.|+++++|+||+.++.||.++|++++.||+|.++.
T Consensus 245 -----------M~~Kl~aa~~a~~~gv~~v~I~~g~~p~~ll~~l~~~~~~GT~i~~~~ 292 (299)
T 2ap9_A 245 -----------MVPKVEACLRAVIGGVPSAHIIDGRVTHCVLVELFTDAGTGTKVVRGE 292 (299)
T ss_dssp -----------THHHHHHHHHHHHHTCSEEEEEETTSTTHHHHHHHSCCCCSEEEECCC
T ss_pred -----------hHHHHHHHHHHHHcCCCEEEEecCCCCcHHHHHHhcCCCCcEEEecCC
Confidence 899999999999999999999999999998899999999999998764
|
| >2v5h_A Acetylglutamate kinase; amino-acid biosynthesis, transcription regulation, transfera cyanobacteria, transcription; HET: NLG; 2.75A {Synechococcus elongatus} PDB: 2jj4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-51 Score=425.83 Aligned_cols=279 Identities=29% Similarity=0.473 Sum_probs=253.2
Q ss_pred hhHHHHHHHHhhhHHHhhcCCeEEEEeCCccCCCCC-hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccC
Q 007903 80 DEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLG 158 (585)
Q Consensus 80 ~~~~~~~~r~a~~yi~~~r~k~iVIKlGGs~l~~~~-l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~ 158 (585)
+.+|++|||+|+|||++||++++|||+||+++++++ +..++++|+.|++.|+++||||||||+++.+++++|+++++.+
T Consensus 30 ~~~~~~~~~~a~pyi~~~~~k~iVIKlGGs~l~~~~~~~~l~~~i~~l~~~G~~vVlVhGgG~~i~~~~~~~g~~~~~~~ 109 (321)
T 2v5h_A 30 AADRVRILSEALPYLQQFAGRTVVVKYGGAAMKQEELKEAVMRDIVFLACVGMRPVVVHGGGPEINAWLGRVGIEPQFHN 109 (321)
T ss_dssp CCCHHHHHHHTHHHHHHTTTCEEEEEECTHHHHSHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHHTTCCCCBSS
T ss_pred hhhHHHHHHHHHHHHHHhCCCeEEEEECchhhCCchHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCccccC
Confidence 458999999999999999999999999999999866 6899999999999999999999999999999999999999999
Q ss_pred CccCCCHHHHHHH-HHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEE
Q 007903 159 RYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVK 237 (585)
Q Consensus 159 g~rvt~~~~l~~~-~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~ 237 (585)
|+|+|++++|+.+ ++++|++|+.|+++ |+++|++ ++++++.+++++.+++.+ +.||+++|+++
T Consensus 110 g~Rvt~~~~l~~~~~~~~G~in~~l~~~---------L~~~g~~----a~gl~~~~a~~l~a~~~~---~~d~g~~g~v~ 173 (321)
T 2v5h_A 110 GLRVTDADTMEVVEMVLVGRVNKDIVSR---------INTTGGR----AVGFCGTDGRLVLARPHD---QEGIGFVGEVN 173 (321)
T ss_dssp SSBCBCHHHHHHHHHHHHHTHHHHHHHH---------HHHHTCC----EEEECTTGGGSEEEEECS---SCSSBSBEEEE
T ss_pred CcccCCHHHHHHHHHHHhChHHHHHHHH---------HHhCCCC----eeeeChhhccEEEeecCC---CccccccceeE
Confidence 9999999999997 66789999998885 4788887 899999999999998764 36899999999
Q ss_pred EecHHHHHHHHcCCCeEEEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC---C-CCcccccccHHHHH
Q 007903 238 KVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD---E-SGHLIRFLTLQEAD 313 (585)
Q Consensus 238 ~v~~~~I~~lL~~G~IPVi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~---~-~~~lI~~it~~e~~ 313 (585)
.+|.+.|++||++|+|||++|++++++|+.+|+|+|++|+++|.+|+||+|||+|||||++ | ++++|++|+.+|++
T Consensus 174 ~v~~~~i~~lL~~g~IpVi~~v~~~~~G~~~~i~~D~~Aa~lA~~l~Ad~LiilTDVdGVy~~dp~~a~~i~~is~~e~~ 253 (321)
T 2v5h_A 174 SVNSEVIEPLLERGYIPVISSVAADENGQSFNINADTVAGEIAAALNAEKLILLTDTRGILEDPKRPESLIPRLNIPQSR 253 (321)
T ss_dssp EECGGGTHHHHHTTCEEEEESEEECTTSCEEECCHHHHHHHHHHHTTCSEEEEEESSSSCBSSTTCTTCBCCEEEHHHHH
T ss_pred EecHHHHHHHHHCCCeEEEeCceECCCCCEEEeCHHHHHHHHHHHcCCCEEEEeeCCCceEcCCCCCCeeeeEEcHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999983 3 58999999999998
Q ss_pred HHHHhhchhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccc
Q 007903 314 SLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQER 393 (585)
Q Consensus 314 ~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~ 393 (585)
+++..+. + +| |
T Consensus 254 ~l~~~g~-----------------------------~------------------------~g-G--------------- 264 (321)
T 2v5h_A 254 ELIAQGI-----------------------------V------------------------GG-G--------------- 264 (321)
T ss_dssp HHHHTTS-----------------------------S------------------------CT-T---------------
T ss_pred HHHhCCC-----------------------------C------------------------cC-c---------------
Confidence 8864321 1 24 5
Q ss_pred cccccCcHHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeecccccc
Q 007903 394 LSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYE 449 (585)
Q Consensus 394 ~~~~~~m~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~~d~~~ 449 (585)
|.+|++||..|++.|+++++|+||+.++.||.++|++++.||+|.++.|+
T Consensus 265 ------M~~Kl~Aa~~a~~~gv~~v~I~~g~~~~~ll~~l~~~~~~GT~I~~~~~~ 314 (321)
T 2v5h_A 265 ------MIPKVDCCIRSLAQGVRAAHIIDGRIPHALLLEIFTDAGIGTMIVGSGYH 314 (321)
T ss_dssp ------HHHHHHHHHHHHHTTCSEEEEEETTSTTHHHHHHHCCCCSEEEEECC---
T ss_pred ------HHHHHHHHHHHHHcCCCEEEEEeCCCCchHHHHHhcCCCCceEEECCccc
Confidence 99999999999999999999999999999889999999999999988773
|
| >2rd5_A Acetylglutamate kinase-like protein; protein-protein complex, regulation of arginine biosynthesis nitrogen metabolism, kinase, transferase, transcription; HET: ARG ADP NLG ATP; 2.51A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-50 Score=419.61 Aligned_cols=277 Identities=27% Similarity=0.437 Sum_probs=250.6
Q ss_pred ChhHHHHHHHHhhhHHHhhcCCeEEEEeCCccCCCCC-hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCccccc
Q 007903 79 EDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYL 157 (585)
Q Consensus 79 ~~~~~~~~~r~a~~yi~~~r~k~iVIKlGGs~l~~~~-l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~ 157 (585)
.+.+|++|||||+|||++||++++|||+||+++++++ +..++++|+.|++.|+++|||||||++++.+++++++++++.
T Consensus 16 ~~~~~~~~~~~a~pyi~~~~~k~iVIKlGGs~l~~~~~~~~~~~~i~~l~~~G~~vViVhGgG~~i~~~~~~~~~~~~~~ 95 (298)
T 2rd5_A 16 SPDYRVEILSESLPFIQKFRGKTIVVKYGGAAMTSPELKSSVVSDLVLLACVGLRPILVHGGGPDINRYLKQLNIPAEFR 95 (298)
T ss_dssp --CHHHHHHHHTHHHHHHTTTCEEEEEECTHHHHCHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHHTTCCCCEE
T ss_pred ChHHHHHHHHHHHHHHHHhcCCEEEEEECchhhCChhHHHHHHHHHHHHHHCCCCEEEEECCcHHHHHHHHHcCCCcccc
Confidence 3578999999999999999999999999999999866 689999999999999999999999999999999999999999
Q ss_pred CCccCCCHHHHHHH-HHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeE
Q 007903 158 GRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEV 236 (585)
Q Consensus 158 ~g~rvt~~~~l~~~-~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v 236 (585)
+|+|+|++++|+.+ ++++|++|..+++. |+++|++ ++++++.+++++.+++.+ +++||+++|++
T Consensus 96 ~g~R~t~~~~l~~~~~~~~G~~n~~l~~~---------l~~~g~~----a~~l~~~~~~~l~~~~~~--~~~d~g~~g~v 160 (298)
T 2rd5_A 96 DGLRVTDATTMEIVSMVLVGKVNKNLVSL---------INAAGAT----AVGLSGHDGRLLTARPVP--NSAQLGFVGEV 160 (298)
T ss_dssp TTEECBCHHHHHHHHHHHHHTHHHHHHHH---------HHHTTSC----EEEEETTGGGCEEEEECT--THHHHBSEEEE
T ss_pred CCcccCCHHHHHHHHHHHhchHHHHHHHH---------HHhCCCC----ccccChHHCCEEEEEeCC--ccccCCcceEE
Confidence 99999999999987 55679999988775 5788987 899999999999988764 33589999999
Q ss_pred EEecHHHHHHHHcCCCeEEEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC---C-CCcccccccHHHH
Q 007903 237 KKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD---E-SGHLIRFLTLQEA 312 (585)
Q Consensus 237 ~~v~~~~I~~lL~~G~IPVi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~---~-~~~lI~~it~~e~ 312 (585)
+.+|.+.|++||++|+|||++|++.+++|+.+|+|+|++|+++|.+|+||+|+|+|||||++ | ++++|++++.+|+
T Consensus 161 ~~v~~~~i~~lL~~g~IpVi~~v~~~~~G~~~~i~~D~~Aa~lA~~l~Ad~LiilTdVdGVy~~dp~~a~~i~~is~~e~ 240 (298)
T 2rd5_A 161 ARVDPSVLRPLVDYGYIPVIASVAADDSGQAYNINADTVAGELAAALGAEKLILLTDVAGILENKEDPSSLIKEIDIKGV 240 (298)
T ss_dssp EEECGGGHHHHHHTTCEEEEESEEECTTSCEEEECHHHHHHHHHHHHTCSEEEEEESSSSEESSSSCTTSEECEEEHHHH
T ss_pred EEECHHHHHHHHhCCCEEEEcCeeECCCCCEEEECHHHHHHHHHHHcCCCEEEEEeCCcCeecCCCCCCCCcccCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999983 2 3899999999999
Q ss_pred HHHHHhhchhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCccccccccccccc
Q 007903 313 DSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQE 392 (585)
Q Consensus 313 ~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~ 392 (585)
++++..+. + +| |
T Consensus 241 ~~~~~~g~-----------------------------~------------------------~g-G-------------- 252 (298)
T 2rd5_A 241 KKMIEDGK-----------------------------V------------------------AG-G-------------- 252 (298)
T ss_dssp HHHHHTTS-----------------------------S------------------------CT-T--------------
T ss_pred HHHHHCCC-----------------------------C------------------------CC-c--------------
Confidence 88864321 1 24 5
Q ss_pred ccccccCcHHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeecc
Q 007903 393 RLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (585)
Q Consensus 393 ~~~~~~~m~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~~ 445 (585)
|.+|++||..|++.|++++||+||+.++.||.++|++++.||+|.+
T Consensus 253 -------M~~Kl~aa~~a~~~gv~~v~I~~g~~~~~ll~~l~~~~~~GT~i~~ 298 (298)
T 2rd5_A 253 -------MIPKVKCCIRSLAQGVKTASIIDGRRQHSLLHEIMSDEGAGTMITG 298 (298)
T ss_dssp -------HHHHHHHHHHHHHTTCSEEEEEETTSTTHHHHHHHSSSCSEEEEEC
T ss_pred -------hHHHHHHHHHHHHcCCCeEEEecCCCCchHHHHHhcCCCCceEEeC
Confidence 9999999999999999999999999999987999999999999863
|
| >2bty_A Acetylglutamate kinase; N-acetyl-L-glutamate kinase, amino acid kinase, phosphoryl group transfer, arginine metabolism, transferase; HET: ARG NLG; 2.75A {Thermotoga maritima} SCOP: c.73.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-50 Score=411.52 Aligned_cols=275 Identities=28% Similarity=0.457 Sum_probs=249.8
Q ss_pred hHHHHHHHHhhhHHHhhcCCeEEEEeCCccCCCCC-hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCC
Q 007903 81 EQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGR 159 (585)
Q Consensus 81 ~~~~~~~r~a~~yi~~~r~k~iVIKlGGs~l~~~~-l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g 159 (585)
.+|++|||+|+|||++||++++|||+||+++++++ +..++++|+.|++.|+++||||||||+++.+++++++++++.+|
T Consensus 3 ~~~~~~~~~~~pyi~~~~~~~iViKlGGs~l~~~~~~~~~~~~i~~l~~~G~~vVlVhGgG~~i~~~~~~~~~~~~~~~g 82 (282)
T 2bty_A 3 IDTVNVLLEALPYIKEFYGKTFVIKFGGSAMKQENAKKAFIQDIILLKYTGIKPIIVHGGGPAISQMMKDLGIEPVFKNG 82 (282)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEEEEECSHHHHSHHHHHHHHHHHHHHHHTTCEEEEEECCSHHHHHHHHHHTCCCCBSSS
T ss_pred hHHHHHHHHHHHHHHHhcCCeEEEEECchhhCChhHHHHHHHHHHHHHHCCCcEEEEECCcHHHHHHHHHcCCCccccCC
Confidence 47999999999999999999999999999999866 78999999999999999999999999999999999999999999
Q ss_pred ccCCCHHHHHHH-HHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEE
Q 007903 160 YRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKK 238 (585)
Q Consensus 160 ~rvt~~~~l~~~-~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~ 238 (585)
+|+|++++|+.+ ++++|++|+.|++. |+++|++ ++++++.+++++.+++.++ +.|++++|+|+.
T Consensus 83 ~r~t~~~~l~~~~~~~~G~~~~~l~~~---------l~~~g~~----a~~l~~~~~~~l~~~~~~~--~~d~g~~g~v~~ 147 (282)
T 2bty_A 83 HRVTDEKTMEIVEMVLVGKINKEIVMN---------LNLHGGR----AVGICGKDSKLIVAEKETK--HGDIGYVGKVKK 147 (282)
T ss_dssp SBCBCHHHHHHHHHHHHHTHHHHHHHH---------HHTTTCC----EEEEETTGGGSEEEEECCT--TCCCBSBEEEEE
T ss_pred cccCCHHHHHHHHHHHhhHHHHHHHHH---------HHhCCCC----ceecChhhCCEEEEecCCc--ccCCCcceEEEE
Confidence 999999999987 56679999988875 4678887 8999999999999887643 458999999999
Q ss_pred ecHHHHHHHHcCCCeEEEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC-CCCcccccccHHHHHHHHH
Q 007903 239 VDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-ESGHLIRFLTLQEADSLIR 317 (585)
Q Consensus 239 v~~~~I~~lL~~G~IPVi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~-~~~~lI~~it~~e~~~li~ 317 (585)
+|.+.|++||+.|.|||++|++.+++|+.+|+|+|++|+++|.+|+||+|+|+|||||++ .. ++|++++.+|+++++.
T Consensus 148 ~~~~~i~~ll~~g~IpVi~~v~~~~~G~~~~~~~D~~Aa~lA~~l~Ad~liilTDVdGvy~~~-~~i~~i~~~e~~~~~~ 226 (282)
T 2bty_A 148 VNPEILHALIENDYIPVIAPVGIGEDGHSYNINADTAAAEIAKSLMAEKLILLTDVDGVLKDG-KLISTLTPDEAEELIR 226 (282)
T ss_dssp ECTHHHHHHHHTTCEEEEESEEECSSSCEEECCHHHHHHHHHHHHTCSEEEEEESSSSCEETT-EECCEECHHHHHHHHT
T ss_pred ecHHHHHHHHHCCCEEEECCCccCCCCCEEEECHHHHHHHHHHHcCCCEEEEEeCCCCeecCc-hhhhhCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999984 23 9999999999888763
Q ss_pred hhchhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccc
Q 007903 318 QRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRL 397 (585)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~ 397 (585)
.+. + +| |
T Consensus 227 ~g~-----------------------------~------------------------~g-G------------------- 233 (282)
T 2bty_A 227 DGT-----------------------------V------------------------TG-G------------------- 233 (282)
T ss_dssp TTC-----------------------------S------------------------CT-T-------------------
T ss_pred cCC-----------------------------C------------------------CC-c-------------------
Confidence 211 1 34 5
Q ss_pred cCcHHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeeccc
Q 007903 398 NGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446 (585)
Q Consensus 398 ~~m~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~~d 446 (585)
|.+|++||..|++.|+++++|+||+.++.||.++|++++.||+|.++
T Consensus 234 --M~~K~~aa~~a~~~gv~~v~I~~g~~~~~ll~~~~~~~~~GT~i~~~ 280 (282)
T 2bty_A 234 --MIPKVECAVSAVRGGVGAVHIINGGLEHAILLEIFSRKGIGTMIKEL 280 (282)
T ss_dssp --HHHHHHHHHHHHHTTCSCEEEEETTSTTHHHHHHSSSSCSSEEECCC
T ss_pred --HHHHHHHHHHHHHhCCCeEEEecCCCCchHHHHHhcCCCCceEEEeC
Confidence 99999999999999999999999999999889999999999999764
|
| >3zzh_A Acetylglutamate kinase; transferase, arginine biosynthesis; HET: ARG NLG; 2.10A {Saccharomyces cerevisiae} PDB: 3zzg_A 3zzf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-48 Score=397.00 Aligned_cols=261 Identities=25% Similarity=0.345 Sum_probs=229.4
Q ss_pred HHHhhhHHHhhcC----CeEEEEeCCccCCCCChHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCccC
Q 007903 87 FREAWPYLWAHRG----GTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRI 162 (585)
Q Consensus 87 ~r~a~~yi~~~r~----k~iVIKlGGs~l~~~~l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rv 162 (585)
.||+.|||++||+ +++|||+||+++++ .+++++++|+.|+..|.++||||||||+++++++++|++++|++|+|+
T Consensus 32 ~re~~~yi~~f~~~~~~~~iViK~GGsv~~~-~~~~~~~dI~~l~~~G~~~VvVHGgG~~i~~~l~~~gi~~~~~~G~Rv 110 (307)
T 3zzh_A 32 KREVEQYLKYFTSVSQQQFAVIKVGGAIISD-NLHELASCLAFLYHVGLYPIVLHGTGPQVNGRLEAQGIEPDYIDGIRI 110 (307)
T ss_dssp HHHHHHHHHHHHCCCCSCCEEEEECHHHHHH-SHHHHHHHHHHHHHBTCCEEEEECCHHHHHHHHHHTTCCCCEETTEEC
T ss_pred hhhHHHHHHHHhCCCCCCEEEEEEChHHhhc-hHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHcCCCccccCCeec
Confidence 5679999999999 89999999999876 489999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHH
Q 007903 163 TDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVT 242 (585)
Q Consensus 163 t~~~~l~~~~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~ 242 (585)
|++++|+++.++++++|..|+++ |+++|++ ++++++ +++++++ ++++||||+|+|+++|++
T Consensus 111 Td~~~l~vv~m~~~~vn~~lv~~---------L~~~G~~----Av~l~g---g~~~a~~---~~~~d~g~~G~i~~v~~~ 171 (307)
T 3zzh_A 111 TDEHTMAVVRKCFLEQNLKLVTA---------LEQLGVR----ARPITS---GVFTADY---LDKDKYKLVGNIKSVTKE 171 (307)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHH---------HHHTTCC----EEEECS---SSEEEEE---SCHHHHBSBEEEEEECCH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHH---------HHhCCCC----eeEEcC---CcEEEEe---cCccccCccccccccCHH
Confidence 99999999966678999999875 4789987 888875 4567776 467799999999999999
Q ss_pred HHHHHHcCCCeEEEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC--CCCcccccccHHH-HHHHHHhh
Q 007903 243 RMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD--ESGHLIRFLTLQE-ADSLIRQR 319 (585)
Q Consensus 243 ~I~~lL~~G~IPVi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~--~~~~lI~~it~~e-~~~li~~~ 319 (585)
.|+.+|++|+|||++|++++.+|+++|+|+|++|+++|.+|+||+|||+|||||++ +++++|++++..| +++++.++
T Consensus 172 ~i~~lL~~g~IpVi~~~g~~~~G~~~~i~~D~~A~~lA~~L~Ad~Li~lTdV~GV~~~~~~~~i~~i~~~e~~~~l~~~~ 251 (307)
T 3zzh_A 172 PIEASIKAGALPILTSLAETASGQMLNVNADVAAGELARVFEPLKIVYLNEKGGIINGSTGEKISMINLDEEYDDLMKQS 251 (307)
T ss_dssp HHHHHHHHTCEEEECCCEECTTCBEEBCCHHHHHHHHHHHHCCSEEEEECSSCSCEETTTTEECCEEEHHHHHHHHHTST
T ss_pred HHHHHHHCCCEEEEeCCeECCCCcEEecCHHHHHHHHHHhCCCCEEEEEeCCcceecCCCCcCCcccCHHHHHHHHHhCC
Confidence 99999999999999999999899999999999999999999999999999999984 5899999999875 66665321
Q ss_pred chhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccC
Q 007903 320 VKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNG 399 (585)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~ 399 (585)
. + +| |
T Consensus 252 ~-----------------------------~------------------------tG-G--------------------- 256 (307)
T 3zzh_A 252 W-----------------------------V------------------------KY-G--------------------- 256 (307)
T ss_dssp T-----------------------------S------------------------CH-H---------------------
T ss_pred C-----------------------------C------------------------CC-c---------------------
Confidence 1 1 24 4
Q ss_pred cHHHHHHHHHHHHc---CCCeEEEecCccchhhHHHHHhcCCCceeeccc
Q 007903 400 YLSELAAAAFVCRR---GVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446 (585)
Q Consensus 400 m~~kl~aa~~a~~~---Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~~d 446 (585)
|.+||+||..|++. |. .++|++ ++.|+.|+|++++.||+|.+.
T Consensus 257 M~~Kl~aa~~a~~~v~~g~-~v~I~~---~~~ll~elft~~g~GT~I~~~ 302 (307)
T 3zzh_A 257 TKLKIREIKELLDYLPRSS-SVAIIN---VQDLQKELFTDSGAGTMIRRG 302 (307)
T ss_dssp HHHHHHHHHHHHHHSCTTC-CEEEEC---GGGHHHHHHSCCCCSEEEECC
T ss_pred HHHHHHHHHHHHHHhccCe-EEEEeC---ccHHHHHHhcCCCCcEEEecC
Confidence 99999965555544 64 599998 788899999999999999875
|
| >3l86_A Acetylglutamate kinase; ARGB, amino-acid biosynthesis, arginine biosynthesi binding, nucleotide-binding, transferase; HET: ADP NLG; 2.06A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-45 Score=374.39 Aligned_cols=243 Identities=26% Similarity=0.358 Sum_probs=221.5
Q ss_pred CCeEEEEeCCccCCCCChHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHH-HHHHhH
Q 007903 99 GGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAAGG 177 (585)
Q Consensus 99 ~k~iVIKlGGs~l~~~~l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~-~~~~G~ 177 (585)
.|++|||+||+++++. ++.++++|+.|+..|+++||||||||+++..++++|++++|.+|+|+|++++|+++ ++++|+
T Consensus 36 ~k~iVIKiGGs~l~~~-~~~l~~dIa~L~~~G~~vVlVhgGg~~i~~~l~~lg~~~~~~~G~Rvtd~~~l~~v~~~l~G~ 114 (279)
T 3l86_A 36 KDIIVIKIGGVASQQL-SGDFLSQIKNWQDAGKQLVIVHGGGFAINKLMEENQVPVKKINGLRVTSKDDMVLVSHALLDL 114 (279)
T ss_dssp CCEEEEEECTTGGGSC-CHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHHTTCCCCEETTEECBCHHHHHHHHHHHHHT
T ss_pred CceEEEEEChHHHHhH-HHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHHHcCCCCccCCCcccCcHHHHHHHHHHHHHH
Confidence 3799999999999874 78999999999999999999999999999999999999999999999999999998 568999
Q ss_pred HHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHHcCCCeEEEc
Q 007903 178 IRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILS 257 (585)
Q Consensus 178 i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL~~G~IPVi~ 257 (585)
+|..+++. |+++|++ ++++++.|++++++++. ++.||+++|+|+++|.+.|+.||++|+|||++
T Consensus 115 ln~~i~~~---------L~~~G~~----a~~l~g~dg~llta~~~---~~~d~g~vG~i~~v~~~~i~~lL~~g~IPVi~ 178 (279)
T 3l86_A 115 VGKNLQEK---------LRQAGVS----CQQLKSDIKHVVAADYL---DKDTYGYVGDVTHINKRVIEEFLENRQIPILA 178 (279)
T ss_dssp THHHHHHH---------HHHTTCC----EEECSGGGGGTEEEEES---CHHHHBSBEEEEEECHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHH---------HHhCCCC----EEEEecCcCCEEEeecc---CccccCcccccchhhHHHHHHHHhCCcEEEEC
Confidence 99999885 5788987 79999999999999875 66799999999999999999999999999999
Q ss_pred CCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccCCCCcccccccHHHHHHHHHhhchhhhHHHHHHhhhhccc
Q 007903 258 NLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEED 337 (585)
Q Consensus 258 ~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~~~~~lI~~it~~e~~~li~~~~~~~~~~~~~~~~~~~~~ 337 (585)
|++++++|+.+|+|+|++|+++|.+|+||+|||+|||||++.++++|++++.+|+++++..+
T Consensus 179 ~v~~~~~G~~~~i~~D~~Aa~lA~~L~Ad~LiilTDVdGV~~d~~~I~~i~~~e~~~l~~~~------------------ 240 (279)
T 3l86_A 179 SLGYSKEGDMLNINADYLATAVAVALAADKLILMTNVKGVLENGAVLEKITSHQVQEKIDTA------------------ 240 (279)
T ss_dssp SEEECTTSCEEECCHHHHHHHHHHHTTCSEEEEECSSSSCEETTEECCEEEGGGSHHHHHTT------------------
T ss_pred CcEECCCCCEeecCHHHHHHHHHHHcCCCEEEEEeCCCccccCCEehhhccHHHHHHHHhCC------------------
Confidence 99999999999999999999999999999999999999998789999999999988887431
Q ss_pred ccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccCcHHHHHHHHHHHHcCCCe
Q 007903 338 ITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQR 417 (585)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~~kl~aa~~a~~~Gv~~ 417 (585)
+.+| | |.+||+||..|++.|+++
T Consensus 241 -----------------------------------~~tG-G---------------------M~~Kl~aa~~a~~~Gv~~ 263 (279)
T 3l86_A 241 -----------------------------------VITA-G---------------------MIPKIESAAKTVAAGVGQ 263 (279)
T ss_dssp -----------------------------------SSCT-T---------------------HHHHHHHHHHHHHTTCSE
T ss_pred -----------------------------------CCcC-c---------------------HHHHHHHHHHHHHcCCCE
Confidence 1135 5 999999999999999999
Q ss_pred EEEecCccchhhHHHHHhcCCCceeeccc
Q 007903 418 VHLLDGTIGGVLLLELFKRDGMGTMVASD 446 (585)
Q Consensus 418 v~I~~g~~~~~ll~el~~~~~~GT~i~~d 446 (585)
+||+|+..+ ||+|..|
T Consensus 264 v~I~~~~~~-------------GT~i~~~ 279 (279)
T 3l86_A 264 VLIGDNLLT-------------GTLITAD 279 (279)
T ss_dssp EEEESSSSC-------------SEEEECC
T ss_pred EEEeccCCC-------------CeEEecC
Confidence 999997532 8888643
|
| >1gs5_A Acetylglutamate kinase; carbamate kinase, amino acid kinase, arginine biosynthesis, phosphoryl group transfer, protein crystallography; HET: NLG ANP; 1.5A {Escherichia coli} SCOP: c.73.1.2 PDB: 1gsj_A* 1oh9_A* 1oha_A* 1ohb_A* 2wxb_A 2x2w_A* 3t7b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-40 Score=332.30 Aligned_cols=252 Identities=22% Similarity=0.294 Sum_probs=225.2
Q ss_pred CCeEEEEeCCccCCCCC-hHHHHHHHHHHHHCCC-eEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHH-HHHH
Q 007903 99 GGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGI-RFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAA 175 (585)
Q Consensus 99 ~k~iVIKlGGs~l~~~~-l~~l~~~Ia~L~~~G~-~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~-~~~~ 175 (585)
++++|||+||+++++++ +++++++|+.+.+.|. ++|||||||++++.+++++++++++..|+|+|+.+.++.+ ++++
T Consensus 2 m~~~ViK~GGs~l~~~~~~~~~~~~i~~l~~~g~~~vVvV~Ggg~~~~~ll~~~g~~~~~~~glr~t~~~~l~~~~~~l~ 81 (258)
T 1gs5_A 2 MNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALA 81 (258)
T ss_dssp CCCEEEEECGGGGGCHHHHHHHHHHHHHHHTTCCSCEEEEECCHHHHHHHHHHHTCCCCEETTEECBCHHHHHHHHHHHH
T ss_pred CccEEEEEChhHhCChHHHHHHHHHHHHHHHcCCCeEEEEeCCcHHHHHHHHHcCCCcceeCCEeeCCHHHHHHHHHHHh
Confidence 46799999999999876 8999999999887665 5899999999999999999999889999999999999886 5788
Q ss_pred hHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHHcCCCeEE
Q 007903 176 GGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVI 255 (585)
Q Consensus 176 G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL~~G~IPV 255 (585)
+.+|..|++. |+++|++ ++++++.|++++++++.+ .|++++|+++.++.+.|+.+|++|.|||
T Consensus 82 ~~~n~~l~~~---------l~~~G~~----a~~l~~~~~~~~~~~~~~----~d~~~~g~~~~~~~~~i~~ll~~g~ipV 144 (258)
T 1gs5_A 82 GTANKTLLAW---------AKKHQIA----AVGLFLGDGDSVKVTQLD----EELGHVGLAQPGSPKLINSLLENGYLPV 144 (258)
T ss_dssp THHHHHHHHH---------HHHTTCC----EEEECTTGGGCEEEEECC----GGGBSBEEEEECCCHHHHHHHHTTCEEE
T ss_pred ccchHHHHHH---------HHHCCCC----eEEEeecCCCEEEEEEcC----CCCCCcCceeEECHHHHHHHHHCCCEEE
Confidence 9999999875 4789987 899999999999998753 5789999999999999999999999999
Q ss_pred EcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC-CCCcccccccHHHHHHHHHhhchhhhHHHHHHhhhh
Q 007903 256 LSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVA 334 (585)
Q Consensus 256 i~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~-~~~~lI~~it~~e~~~li~~~~~~~~~~~~~~~~~~ 334 (585)
++|++.+++|+++|+|+|++|+++|.+|+|| |+|+|||||++ .++++|++++.+|+++++..+.
T Consensus 145 i~~~g~~~~g~~~~~~~D~~Aa~lA~~l~Ad-li~ltdV~Gv~~~d~~~i~~i~~~e~~~l~~~~~-------------- 209 (258)
T 1gs5_A 145 VSSIGVTDEGQLMNVNADQAATALAATLGAD-LILLSDVSGILDGKGQRIAEMTAAKAEQLIEQGI-------------- 209 (258)
T ss_dssp ECSEEECTTSCEEECCHHHHHHHHHHHHTCE-EEEEESSSSCBCTTSCBCCEECHHHHHHHHHTTC--------------
T ss_pred EeCCcCCCCCcEEEecHHHHHHHHHHHhCCc-EEEEeCCCceECCCCCCCcccCHHHHHHHHhcCC--------------
Confidence 9999999999999999999999999999999 99999999984 6799999999999988864321
Q ss_pred cccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccCcHHHHHHHHHHHHcC
Q 007903 335 EEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRG 414 (585)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~~kl~aa~~a~~~G 414 (585)
+ +| | |.+|+.+|..+|+.+
T Consensus 210 ---------------~------------------------~g-G---------------------m~~k~~~a~~~~~~~ 228 (258)
T 1gs5_A 210 ---------------I------------------------TD-G---------------------MIVKVNAALDAARTL 228 (258)
T ss_dssp ---------------S------------------------CT-H---------------------HHHHHHHHHHHHHHH
T ss_pred ---------------C------------------------CC-c---------------------HHHHHHHHHHHHHhC
Confidence 1 23 4 999999999999865
Q ss_pred CCeEEEecCccchhhHHHHHhcCCCceeec
Q 007903 415 VQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (585)
Q Consensus 415 v~~v~I~~g~~~~~ll~el~~~~~~GT~i~ 444 (585)
+.++||+|++.++. |.++|++++.||+|.
T Consensus 229 ~~~v~I~~~~~~~~-l~~~~~~~~~GT~i~ 257 (258)
T 1gs5_A 229 GRPVDIASWRHAEQ-LPALFNGMPMGTRIL 257 (258)
T ss_dssp TSCEEEEESSCGGG-HHHHHTTCCSSEEEC
T ss_pred CCEEEEecCCCchH-HHHHhcCCCCcEEEe
Confidence 55799999999998 789999999999985
|
| >3ll9_A Isopentenyl phosphate kinase; mevalonate biosynthesis isoprenoid, transferase; HET: ADP; 2.15A {Methanothermobacter thermautotrophicusorganism_taxid} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-39 Score=331.86 Aligned_cols=242 Identities=12% Similarity=0.149 Sum_probs=188.5
Q ss_pred CCeEEEEeCCccCCCCC----------hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccC--CccCCCHH
Q 007903 99 GGTFVVIISGEIVSSPY----------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLG--RYRITDSE 166 (585)
Q Consensus 99 ~k~iVIKlGGs~l~~~~----------l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~--g~rvt~~~ 166 (585)
+|++|||+||++|++++ +++++++|+.|+ +.++|||||||||++.+++++|++++|.. |+|. +..
T Consensus 2 ~k~iVIKlGG~~l~~~~~~~~~~~~~~l~~l~~~i~~l~--~~~~vlVhGGG~~~~~~~~~~gi~~~~~~~~g~~~-~~~ 78 (269)
T 3ll9_A 2 SHMIILKLGGSVITRKDSEEPAIDRDNLERIASEIGNAS--PSSLMIVHGAGSFGHPFAGEYRIGSEIENEEDLRR-RRF 78 (269)
T ss_dssp -CCEEEEECHHHHEECCSSSCEECHHHHHHHHHHHHHHC--CSSEEEEECCGGGTHHHHHHHTTTSCCCSHHHHHH-HHH
T ss_pred CCEEEEEEChhheecCccccccccHHHHHHHHHHHHHhc--CCCEEEEECCcHHHHHHHHHcCCCcccccCccccc-ccc
Confidence 68999999999998765 578999999876 68999999999999999999999988761 0000 023
Q ss_pred HHHHHHHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHH
Q 007903 167 SLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRE 246 (585)
Q Consensus 167 ~l~~~~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~ 246 (585)
.|.++..+++++|..++++ |+++|++ ++++++.|..++. +|+++.+|.+.|+.
T Consensus 79 G~rvT~~~~~~ln~~l~~~---------L~~~G~~----a~~l~g~~~~~~~--------------~g~v~~v~~~~i~~ 131 (269)
T 3ll9_A 79 GFALTQNWVKKLNSHVCDA---------LLAEGIP----AVSMQPSAFIRAH--------------AGRISHADISLIRS 131 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHH---------HHHTTCC----EEECCGGGTEEEE--------------TTEEEEECCHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHH---------HHHCCCc----EEEEcchHcCeEe--------------cCeeeeecHHHHHH
Confidence 3433333445888888775 5789987 8999988865543 47899999999999
Q ss_pred HHcCCCeEEEcC-CccCCC--CceeeeChHHHHHHHHHHcCCCEEEEeecccccC-------CCCcccccccHHHHHHHH
Q 007903 247 RLDGGCLVILSN-LGYSSS--GEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLI 316 (585)
Q Consensus 247 lL~~G~IPVi~~-v~~~~~--G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~-------~~~~lI~~it~~e~~~li 316 (585)
+|++|+|||++| ++++.+ |+++|+|+|++|+++|.+|+||+|+|+|||||++ +++++|++++.+|+++++
T Consensus 132 lL~~g~ipVi~~~~~~~~~~~g~~~~~~~D~~Aa~lA~~l~Ad~li~ltdv~Gv~~~dp~~~~~a~~i~~i~~~e~~~~l 211 (269)
T 3ll9_A 132 YLEEGMVPVVYGDVVLDSDRRLKFSVISGDQLINHFSLRLMPERVILGTDVDGVYTRNPKKHPDARLLDVIGSLDDLESL 211 (269)
T ss_dssp HHHTTCEEEEECEEEEBSCTTTSEEEECHHHHHHHHHHHHCCSEEEEEESSSSCBSSCTTTCTTCCBCSBCCC-------
T ss_pred HHHCCCEEEECCCEEecccccCcceecchHHHHHHHHHHcCCCeEEEecCCCEEEcCCCCcCCcceEccccCHHHHHHHh
Confidence 999999999999 778888 9999999999999999999999999999999983 357789999998886665
Q ss_pred HhhchhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCccccccccccccccccc
Q 007903 317 RQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSR 396 (585)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~ 396 (585)
... ++.+.+| |
T Consensus 212 ~~~--------------------------------------------------~~~~~tg-G------------------ 222 (269)
T 3ll9_A 212 DGT--------------------------------------------------LNTDVTG-G------------------ 222 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccc--------------------------------------------------CCCcCcC-C------------------
Confidence 321 0112345 5
Q ss_pred ccCcHHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCC-ceeec
Q 007903 397 LNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGM-GTMVA 444 (585)
Q Consensus 397 ~~~m~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~-GT~i~ 444 (585)
|.+||+||..||++|+ ++||+||+.++.| .++|++++. ||+|.
T Consensus 223 ---M~~Kl~aa~~a~~~Gv-~v~I~~g~~~~~l-~~~~~g~~~~GT~i~ 266 (269)
T 3ll9_A 223 ---MVGKIRELLLLAEKGV-ESEIINAAVPGNI-ERALLGEEVRGTRIT 266 (269)
T ss_dssp ----SHHHHHHHHHHHTTC-CEEEEESSSTTHH-HHHHHTCCCSSEEC-
T ss_pred ---cHHHHHHHHHHHhCCC-eEEEEeCCCchHH-HHHHCCCCCCcEEEE
Confidence 8999999999999999 6999999999986 499999999 99986
|
| >2e9y_A Carbamate kinase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-38 Score=331.48 Aligned_cols=258 Identities=19% Similarity=0.157 Sum_probs=214.0
Q ss_pred cCCeEEEEeCCccCC--CC---------ChHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHH
Q 007903 98 RGGTFVVIISGEIVS--SP---------YLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSE 166 (585)
Q Consensus 98 r~k~iVIKlGGs~l~--~~---------~l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rvt~~~ 166 (585)
+++++|||+||++|+ ++ .++.++++|+.|++.|+++|||||||++++.+++++++++++ |++.
T Consensus 3 ~~~~iVIKlGGs~l~~~~~~~~~~~~~~~~~~~a~~I~~l~~~G~~vVlVhGgg~~~~~~~~~~~~~~~~------t~~~ 76 (316)
T 2e9y_A 3 SGRLAVIALGGNAIAGPGMDVSVESQTAAVKRASSIIADVLADGWRSVITHGNGPQVGYLSEAFEALPPE------RPRQ 76 (316)
T ss_dssp -CCEEEEECCHHHHSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHTSCTT------SCCC
T ss_pred CCCEEEEEEChHHhcCCCCCcchhhHHHHHHHHHHHHHHHHHCCCEEEEEcCCcHHHhHHHHHcCCCCCC------CCHH
Confidence 478999999999999 53 268899999999999999999999999999999999988754 6778
Q ss_pred HHHHH-HHHHhHHHHHHHHhhCCCCCchhHHhcCCCCc----ceeEEeeecCcceeeee-eccc-cc-------cccCcc
Q 007903 167 SLAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSR----WHEVGVSVASGNFLAAK-RKGV-VD-------GVDYGA 232 (585)
Q Consensus 167 ~l~~~-~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~----~~av~l~~~dg~~~~a~-~~g~-~~-------g~d~g~ 232 (585)
+|+.+ ++++|+++++|++.|++ .|.++|++++ +.++.|++.|++|..++ +.|. ++ ..+++|
T Consensus 77 ~l~~~~~~~~G~i~~~l~~~l~~-----~l~~~g~~a~~~~v~~qv~l~~~d~~f~~~~k~~g~~~~~~~a~~~~~~~g~ 151 (316)
T 2e9y_A 77 PLYIATAMTQAWIGLLLKHSLEE-----ELRRRGLNVLVPVVISRVLVDVSDPSFNNPSKPVGPIYGREEAEELSRRYGW 151 (316)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHH-----HHHHTTCCCCCCEECCEEEECTTCGGGTSCCEEEEEEECHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHhHHHHHHHHHHHH-----HHHhcCCCccccceeeEEEeccccccccccccccccccchhhhhhhhhhcce
Confidence 88886 57899999889888853 7889998754 34589999999988764 3332 21 124666
Q ss_pred e--ee--------------EEEecHHHHHHHHcCCCeEEEc-----CCccCCCC----ceeeeChHHHHHHHHHHcCCCE
Q 007903 233 T--GE--------------VKKVDVTRMRERLDGGCLVILS-----NLGYSSSG----EVLNCNTYEVATACALAIEADK 287 (585)
Q Consensus 233 ~--G~--------------v~~v~~~~I~~lL~~G~IPVi~-----~v~~~~~G----~~~nid~D~lAa~lA~~L~Adk 287 (585)
+ |. ++.++.+.|++||++|+|||++ |++.+++| +.+|+|+|++|+++|.+|+||+
T Consensus 152 ~~~~~~g~g~r~vv~sp~~i~~v~~~~i~~lL~~g~IpI~~g~~g~pv~~~~~g~~~g~~~~id~D~~Aa~lA~~l~Ad~ 231 (316)
T 2e9y_A 152 VFKRDPRGGFRRVVPSPRPVSIVDRDLIAEASAESPAVVALGGGGVPVVERPGGVLEPVEAVVDKDLASSLLATQLNADL 231 (316)
T ss_dssp EEEECTTSSEEEEECCCCEEEETTHHHHHHHHHHCSEEEECGGGCEEEEECTTSCEEECSCCCCHHHHHHHHHHHTTCSE
T ss_pred eeeccccccceecccCCCcceeehHHHHHHHHHCCCEEEEECCCCCCeeECCCCCeecceeeeCHHHHHHHHHHHcCCCE
Confidence 4 44 7789999999999999999998 78888888 6678899999999999999999
Q ss_pred EEEeecccccC-----CCCcccccccHHHHHHHHHhhchhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccc
Q 007903 288 LICIIDGPILD-----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSER 362 (585)
Q Consensus 288 LIilTDV~gl~-----~~~~lI~~it~~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (585)
|||+|||||++ |++++|++++.+|+++++..+.
T Consensus 232 LiilTdVdGVy~dp~~p~a~~i~~i~~~e~~~~~~~g~------------------------------------------ 269 (316)
T 2e9y_A 232 LVILTDVPGVAVNYGREGERWLRRAAASELKKYLREGH------------------------------------------ 269 (316)
T ss_dssp EEEEESSSSCEETTTSTTCEECSEEEHHHHHHHHHTTC------------------------------------------
T ss_pred EEEEeCchHhhCCCCCCCCcCCcEEcHHHHHHHHhcCC------------------------------------------
Confidence 99999999983 3689999999999988864321
Q ss_pred hhccccCCccccCCCCCcccccccccccccccccccCcHHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCcee
Q 007903 363 RIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTM 442 (585)
Q Consensus 363 ~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~ 442 (585)
+++| | |.+||+||..|++.|++++||++ ++. |.++|++ +.||+
T Consensus 270 ----------~~~G-g---------------------M~~Kv~aa~~a~~~gv~~v~I~~---~~~-l~~~l~g-~~GT~ 312 (316)
T 2e9y_A 270 ----------FPPG-S---------------------MGPKVEAAISFVERTGKPAVIGS---LEE-ARQVLSL-QAGTV 312 (316)
T ss_dssp ----------SCTT-T---------------------HHHHHHHHHHHHHHHCSCEEEEE---STT-HHHHHTT-SSSEE
T ss_pred ----------CCCC-C---------------------HHHHHHHHHHHHHcCCCeEEECc---HHH-HHHHHcC-CCCeE
Confidence 2345 5 99999999999999998899997 333 7889986 89999
Q ss_pred ecc
Q 007903 443 VAS 445 (585)
Q Consensus 443 i~~ 445 (585)
|.+
T Consensus 313 i~~ 315 (316)
T 2e9y_A 313 VML 315 (316)
T ss_dssp EEC
T ss_pred Eec
Confidence 964
|
| >3k4o_A Isopentenyl phosphate kinase; small molecule kinase, ATP-binding, transferase, methanocald jannaschii, isopentenyl monophosphate; 2.05A {Methanocaldococcus jannaschii} PDB: 3k4y_A* 3k52_A* 3k56_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-38 Score=321.00 Aligned_cols=240 Identities=12% Similarity=0.103 Sum_probs=197.2
Q ss_pred hhcCCe-EEEEeCCccCCCCC---------hHHHHHHHHHHHHCC------CeEEEEeCchHHHHHHHHHcCCccc----
Q 007903 96 AHRGGT-FVVIISGEIVSSPY---------LDPILKDIAFLHHLG------IRFVLVPGTHVQIDKLLSERGHEAK---- 155 (585)
Q Consensus 96 ~~r~k~-iVIKlGGs~l~~~~---------l~~l~~~Ia~L~~~G------~~vVlVhGgg~~i~~~l~~~g~~~~---- 155 (585)
.||+.+ +|||+||++|++++ ++.++++|+.|+..| .++|||||||++++.+++++|++++
T Consensus 2 ~~~~~m~iVIKlGGs~l~~~~~~~~~~~~~l~~la~~i~~l~~~G~~~~~~~~vVlVhGGG~~~~~~~~~lgi~~~~~~~ 81 (266)
T 3k4o_A 2 SHGGSMLTILKLGGSILSDKNVPYSIKWDNLERIAMEIKNALDYYKNQNKEIKLILVHGGGAFGHPVAKKYLKIEDGKKI 81 (266)
T ss_dssp -----CEEEEEECTTSSCCTTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEECCHHHHHHHHGGGEEECSSSEE
T ss_pred CCCCceEEEEEEchHHeeCCCccCCcCHHHHHHHHHHHHHHHhccccccCCCCEEEEeCchHHHHHHHHHcCCCcccCcc
Confidence 478876 99999999999862 789999999998888 9999999999999999999999887
Q ss_pred cc---CCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcc
Q 007903 156 YL---GRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGA 232 (585)
Q Consensus 156 ~~---~g~rvt~~~~l~~~~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~ 232 (585)
+. .|+|+|+.+ +.++|..++++ |+++|++ ++++++.|..+..
T Consensus 82 ~~~~~~G~r~T~~a--------~~~ln~~l~~~---------l~~~G~~----a~~l~~~d~~~~~-------------- 126 (266)
T 3k4o_A 82 FINMEKGFWEIQRA--------MRRFNNIIIDT---------LQSYDIP----AVSIQPSSFVVFG-------------- 126 (266)
T ss_dssp ECCHHHHHHHHHHH--------HHHHHHHHHHH---------HHTTTCC----EEEECGGGTCEES--------------
T ss_pred cccccCceeHHHHH--------HHHHHHHHHHH---------HHHCCCc----EEEeeHHHcCccc--------------
Confidence 65 566665544 34678777765 5788987 7888887765442
Q ss_pred eeeEEEecHHHHHHHHcCCCeEEEcC-CccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccCCCCcccccccHHH
Q 007903 233 TGEVKKVDVTRMRERLDGGCLVILSN-LGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQE 311 (585)
Q Consensus 233 ~G~v~~v~~~~I~~lL~~G~IPVi~~-v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~~~~~lI~~it~~e 311 (585)
.| +.+|.+.|+.+|+.|+|||++| ++++++|+++|+|+|++|+++|.+|+||+|||+|||||++.|.+++++++.+|
T Consensus 127 ~g--~~v~~~~i~~lL~~g~ipVi~~~~~~~~~g~~~~~~~D~~Aa~lA~~l~Ad~li~ltdvdGv~~d~~~i~~~~~~e 204 (266)
T 3k4o_A 127 DK--LIFDTSAIKEMLKRNLVPVIHGDIVIDDKNGYRIISGDDIVPYLANELKADLILYATDVDGVLIDNKPIKRIDKNN 204 (266)
T ss_dssp SS--CBCCCHHHHHHHHTTCEEEEECEEEEESSSCEEEECHHHHHHHHHHHHTCSEEEEEESSSSSBSSSSBCSEECTTT
T ss_pred Cc--eEecHHHHHHHHHCCCEEEEeCCEEEcCCCCeeeeCHHHHHHHHHHHcCCCEEEEEecCCeEEeCCeecCcCCHHH
Confidence 12 4678999999999999999998 78888889999999999999999999999999999999988889999999888
Q ss_pred HHHHHHhhchhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccc
Q 007903 312 ADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQ 391 (585)
Q Consensus 312 ~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~ 391 (585)
++++++.-. +.++.+.+| |
T Consensus 205 ~~~l~~~~~-----------------------------------------------~~~~~~~tG-G------------- 223 (266)
T 3k4o_A 205 IYKILNYLS-----------------------------------------------GSNSIDVTG-G------------- 223 (266)
T ss_dssp HHHHHHHHH-----------------------------------------------STTCSCCSS-H-------------
T ss_pred HHHHHHHhc-----------------------------------------------cccCCcccC-C-------------
Confidence 888764310 012234455 5
Q ss_pred cccccccCcHHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeeccc
Q 007903 392 ERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446 (585)
Q Consensus 392 ~~~~~~~~m~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~~d 446 (585)
|.+||++|..||+ ++||+||+.++. |.++|++++.||+|.+.
T Consensus 224 --------M~~Kv~aa~~a~~----~v~I~~g~~~~~-l~~~l~g~~~GT~i~~~ 265 (266)
T 3k4o_A 224 --------MKYKIEMIRKNKC----RGFVFNGNKANN-IYKALLGEVEGTEIDFS 265 (266)
T ss_dssp --------HHHHHHHHHHTTC----EEEEEETTSTTH-HHHHHTTCCCSEEEECC
T ss_pred --------HHHHHHHHHHHhc----CEEEEeCCCccH-HHHHhCCCCCceEEEeC
Confidence 9999999999998 799999999998 78999999999999763
|
| >2we5_A Carbamate kinase 1; arginine catabolism, arginine metabolism, ATP synthesys, open alpha/beta sheet, phosphotransferase, transferase; HET: ADP; 1.39A {Enterococcus faecalis} PDB: 1b7b_A 2we4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-37 Score=321.83 Aligned_cols=258 Identities=17% Similarity=0.185 Sum_probs=208.1
Q ss_pred CCeEEEEeCCccCCC---------CChHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHH
Q 007903 99 GGTFVVIISGEIVSS---------PYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLA 169 (585)
Q Consensus 99 ~k~iVIKlGGs~l~~---------~~l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rvt~~~~l~ 169 (585)
++++|||+||+++++ +.++.++++|+.|++.|+++|||||||++++.+++++++++++ +|++++|+
T Consensus 2 ~k~iVIKlGGs~l~~~~~~~~~~~~~~~~~a~~I~~l~~~G~~vVlVhGgg~~~~~~l~~~~~~~~~-----~~~~~~l~ 76 (310)
T 2we5_A 2 GKKMVVALGGNAILSNDASAHAQQQALVQTSAYLVHLIKQGHRLIVSHGNGPQVGNLLLQQQAADSE-----KNPAMPLD 76 (310)
T ss_dssp CCEEEEECCGGGGCCSSCSHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHTCSS-----SSCCCCHH
T ss_pred CcEEEEEEChHHhcCCCCChHHHHHHHHHHHHHHHHHHHCCCeEEEEECCcHHHhHHHHHcCCCCCC-----CCCHHHHH
Confidence 579999999999986 2378899999999999999999999999999999999987655 47888899
Q ss_pred HH-HHHHhHHHHHHHHhhCCCCCchhHHhcCCCCccee----EEeeecCcceee-eeecccc-cccc-------------
Q 007903 170 AA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHE----VGVSVASGNFLA-AKRKGVV-DGVD------------- 229 (585)
Q Consensus 170 ~~-~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~a----v~l~~~dg~~~~-a~~~g~~-~g~d------------- 229 (585)
++ ++++|++++.+..+|+. .|...|++.++.. ++++..|++|.. +++.|+. .+.|
T Consensus 77 ~~~a~~~G~l~~~i~~al~~-----~l~~~g~~~~v~~~l~~~~v~~~d~~f~~~~~~vg~~~t~~da~~l~~~~~~~~~ 151 (310)
T 2we5_A 77 TCVAMTQGSIGYWLSNALNQ-----ELNKAGIKKQVATVLTQVVVDPADEAFKNPTKPIGPFLTEAEAKEAMQAGAIFKE 151 (310)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-----HHHHTTCCCCEEEBCCEEEECTTCHHHHSCCEEEEEEECHHHHHHHHTTTCCEEE
T ss_pred HHHHHhhhHHHHHHHHHHHH-----HHHhcCCchhhHhhhhhhcccccchhhcccCceeEEeccHHHHHHHHhccccccc
Confidence 87 68999999998877643 6778888765543 667777766432 2333321 1111
Q ss_pred ---Ccce---e---eEEEecHHHHHHHHcCCCeEEEc-----CC-ccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecc
Q 007903 230 ---YGAT---G---EVKKVDVTRMRERLDGGCLVILS-----NL-GYSSSGEVLNCNTYEVATACALAIEADKLICIIDG 294 (585)
Q Consensus 230 ---~g~~---G---~v~~v~~~~I~~lL~~G~IPVi~-----~v-~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV 294 (585)
.+|. | +++.++.+.|+.||++|+|||++ |+ ..+..|+++|+|+|++|+++|.+|+||+|+|+|||
T Consensus 152 ~~~~~~~~vv~sp~~i~~v~~~~i~~lL~~g~IpIi~Gg~Gipv~~~~~~g~~~~~~~D~~Aa~lA~~l~Ad~LiilTdV 231 (310)
T 2we5_A 152 DAGRGWRKVVPSPKPIDIHEAETINTLIKNDIITISCGGGGIPVVGQELKGVEAVIDKDFASEKLAELVDADALVILTGV 231 (310)
T ss_dssp CTTSCEEEEECCCCEEEETTHHHHHHHHHTTCEEECCGGGCEEEETTTTEECCCCCCHHHHHHHHHHHTTCSEEEEECSC
T ss_pred cCCcceeeccCCcccceeehHHHHHHHHHCCCEEEEECCCCCCCcCCCCCCcEeecCHHHHHHHHHHHcCCCEEEEEeCc
Confidence 2332 3 57779999999999999999999 66 56667889999999999999999999999999999
Q ss_pred cccC-----CCCcccccccHHHHHHHHHhhchhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccC
Q 007903 295 PILD-----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNN 369 (585)
Q Consensus 295 ~gl~-----~~~~lI~~it~~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (585)
||++ |++++|++++.+|+++++..+.
T Consensus 232 dGVy~dp~~~~a~~i~~i~~~e~~~~~~~g~------------------------------------------------- 262 (310)
T 2we5_A 232 DYVCINYGKPDEKQLTNVTVAELEEYKQAGH------------------------------------------------- 262 (310)
T ss_dssp SSCEESTTSTTCEECCEEEHHHHHHHHHTTC-------------------------------------------------
T ss_pred hHhhCCCCCCCCeECCEEcHHHHHHHhhCCC-------------------------------------------------
Confidence 9983 3699999999999888864321
Q ss_pred CccccCCCCCcccccccccccccccccccCcHHHHHHHHHHHHcCCC-eEEEecCccchhhHHHHHhcCCCceeec
Q 007903 370 GVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQ-RVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (585)
Q Consensus 370 ~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~~kl~aa~~a~~~Gv~-~v~I~~g~~~~~ll~el~~~~~~GT~i~ 444 (585)
+++| | |.+||+||..|++.|++ ++||++ ++. |.++|++++.||+|.
T Consensus 263 ---~~~G-g---------------------M~~Kv~aa~~a~~~gv~~~v~I~~---~~~-l~~~l~g~~~GT~i~ 309 (310)
T 2we5_A 263 ---FAPG-S---------------------MLPKIEAAIQFVESQPNKQAIITS---LEN-LGSMSGDEIVGTVVT 309 (310)
T ss_dssp ---SCTT-T---------------------THHHHHHHHHHHHHSTTCEEEEEC---SGG-GGGCBTTBCCSEEEE
T ss_pred ---CCCC-C---------------------hHHHHHHHHHHHHcCCCceEEECc---HHH-HHHHHcCCCCCeEEe
Confidence 2245 5 89999999999999994 899997 333 678999989999985
|
| >1e19_A Carbamate kinase-like carbamoylphosphate synthetase; transferase, hyperthermophiles, ADP site, phosphoryl group transfer; HET: ADP; 1.5A {Pyrococcus furiosus} SCOP: c.73.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-37 Score=320.58 Aligned_cols=259 Identities=18% Similarity=0.213 Sum_probs=211.7
Q ss_pred CCeEEEEeCCccCC--CC---------ChHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHH
Q 007903 99 GGTFVVIISGEIVS--SP---------YLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSES 167 (585)
Q Consensus 99 ~k~iVIKlGGs~l~--~~---------~l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rvt~~~~ 167 (585)
++++|||+||++|+ ++ .++.++++|+.|++.|+++||||||||+++..+.++++.+++ + ++++++
T Consensus 2 ~k~iViK~GGsal~~~~~~~~~~~~~~~~~~~a~~I~~l~~~G~~vVlVhGgg~~i~~~l~~~~~~~~~-~---~~~~~~ 77 (314)
T 1e19_A 2 GKRVVIALGGNALQQRGQKGSYEEMMDNVRKTARQIAEIIARGYEVVITHGNGPQVGSLLLHMDAGQAT-Y---GIPAQP 77 (314)
T ss_dssp CCEEEEECCGGGTCCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHH-H---CCCCCC
T ss_pred CCEEEEEEChHHhcCCCCccchhhhHHHHHHHHHHHHHHHHCCCeEEEEeCChHHHhHHHHhccCcccc-C---CCChhH
Confidence 68999999999999 53 267999999999999999999999999999999999888766 3 567778
Q ss_pred HHHH-HHHHhHHHHHHHHhhCCCCCchhHHhcCCCCc----ceeEEeeecCcceeeeeec-c-cccc-------ccCcce
Q 007903 168 LAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSR----WHEVGVSVASGNFLAAKRK-G-VVDG-------VDYGAT 233 (585)
Q Consensus 168 l~~~-~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~----~~av~l~~~dg~~~~a~~~-g-~~~g-------~d~g~~ 233 (585)
|+++ ++.+|+++++|++.|++ .|.++|++++ +.++.+++.|++|..+++. | ++.+ .|+||+
T Consensus 78 l~~~~a~~~G~i~~~l~~~l~~-----~l~~~gi~a~~~~~~~qv~l~~~d~~f~~~~k~~g~~~t~~~a~~~~~~~g~~ 152 (314)
T 1e19_A 78 MDVAGAMSQGWIGYMIQQALKN-----ELRKRGMEKKVVTIITQTIVDKNDPAFQNPTKPVGPFYDEETAKRLAREKGWI 152 (314)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-----HHHHTTCCCCEEEBCCEEEECTTCGGGTSCCEEEEEEECHHHHHHHHHHHCCE
T ss_pred HHHHHHHHhhHHHHHHHHHHHH-----HHHHcCCchhhhhhheeeeecccchhhccccccccceecHHHhhhhhhhcCcc
Confidence 8886 56899999999988854 7899998753 3457899999888776432 2 2210 135553
Q ss_pred --ee--------------EEEecHHHHHHHHcCCCeEEEc-----CCccCCC---CceeeeChHHHHHHHHHHcCCCEEE
Q 007903 234 --GE--------------VKKVDVTRMRERLDGGCLVILS-----NLGYSSS---GEVLNCNTYEVATACALAIEADKLI 289 (585)
Q Consensus 234 --G~--------------v~~v~~~~I~~lL~~G~IPVi~-----~v~~~~~---G~~~nid~D~lAa~lA~~L~AdkLI 289 (585)
|. ++.++.+.|+.||++|+|||++ |++.+.+ |..+|+|+|++|+++|.+|+||+|+
T Consensus 153 ~~g~~~~~~~~~v~s~~~i~~v~~~~i~~lL~~g~IpV~~Gg~giPi~~~~d~~~g~~~~~d~D~~Aa~lA~~l~Ad~li 232 (314)
T 1e19_A 153 VKEDSGRGWRRVVPSPDPKGHVEAETIKKLVERGVIVIASGGGGVPVILEDGEIKGVEAVIDKDLAGEKLAEEVNADIFM 232 (314)
T ss_dssp EEECTTSCEEEEECCCCEEEETTHHHHHHHHHTTCEEECSGGGCEEEEEETTEEEECCCCCCHHHHHHHHHHHTTCSEEE
T ss_pred ccccccccccccccCcccceeehHHHHHHHHHCCCEEEEeCCCccCeEECCCCcceeEEeccHHHHHHHHHHHcCCCEEE
Confidence 32 7789999999999999999998 7777766 5667899999999999999999999
Q ss_pred EeecccccC-----CCCcccccccHHHHHHHHHhhchhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchh
Q 007903 290 CIIDGPILD-----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRI 364 (585)
Q Consensus 290 ilTDV~gl~-----~~~~lI~~it~~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (585)
|+|||||++ |++++|++++.+|+++++..+.
T Consensus 233 ~lTdVdGvy~~~p~~~a~~i~~i~~~e~~~~~~~g~-------------------------------------------- 268 (314)
T 1e19_A 233 ILTDVNGAALYYGTEKEQWLREVKVEELRKYYEEGH-------------------------------------------- 268 (314)
T ss_dssp EEESSSSCEETTTSTTCEECCEEEHHHHHHHHHTTC--------------------------------------------
T ss_pred EeccCCEEECCCCCCCCeECCEECHHHHHHHHhCCC--------------------------------------------
Confidence 999999983 3699999999999988864321
Q ss_pred ccccCCccccCCCCCcccccccccccccccccccCcHHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeec
Q 007903 365 ATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (585)
Q Consensus 365 ~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~ 444 (585)
+.+| | |.+||++|..+++.|+.++||+++ + .|.++|++ +.||+|.
T Consensus 269 --------~~~G-g---------------------M~~Kv~aa~~~~~~~~~~v~I~~~---~-~l~~~~~g-~~GT~i~ 313 (314)
T 1e19_A 269 --------FKAG-S---------------------MGPKVLAAIRFIEWGGERAIIAHL---E-KAVEALEG-KTGTQVL 313 (314)
T ss_dssp --------SCTT-T---------------------HHHHHHHHHHHHHHTCSEEEEEEG---G-GHHHHHTT-SSSEEEE
T ss_pred --------cCCC-C---------------------hHHHHHHHHHHHHhCCCeEEEecH---H-HHHHHHcC-CCCeEEc
Confidence 2245 5 999999999999988888999985 2 27899986 7999986
Q ss_pred c
Q 007903 445 S 445 (585)
Q Consensus 445 ~ 445 (585)
+
T Consensus 314 ~ 314 (314)
T 1e19_A 314 P 314 (314)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >3d40_A FOMA protein; fosfomycin, antibiotic resistance, kinase, phosphoryl transfer, transferase; 1.53A {Streptomyces wedmorensis} PDB: 3d41_A* 3qun_A* 3quo_A* 3qur_A* 3qvf_A* 3qvh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-36 Score=307.71 Aligned_cols=245 Identities=14% Similarity=0.167 Sum_probs=186.3
Q ss_pred hHHHhhcCCeEEEEeCCccCCCCC---------hHHHHHHHHHHHHCCC-eEEEEeCchHHHHHHHHHcCCcccccCCcc
Q 007903 92 PYLWAHRGGTFVVIISGEIVSSPY---------LDPILKDIAFLHHLGI-RFVLVPGTHVQIDKLLSERGHEAKYLGRYR 161 (585)
Q Consensus 92 ~yi~~~r~k~iVIKlGGs~l~~~~---------l~~l~~~Ia~L~~~G~-~vVlVhGgg~~i~~~l~~~g~~~~~~~g~r 161 (585)
.||+.|++ ++|||+||+++++++ ++.++++|+.|++.|+ ++|||||||++++..++++++++.+.
T Consensus 17 ~~~~~~~~-~iVIKlGGs~l~~~~~~~~~~~~~l~~la~~Ia~l~~~G~~~vViVhGgG~~~~~~l~~~~~~~~~~---- 91 (286)
T 3d40_A 17 RGSHMTPD-FLAIKVGGSLFSRKDEPGSLDDDAVTRFARNFARLAETYRGRMVLISGGGAFGHGAIRDHDSTHAFS---- 91 (286)
T ss_dssp CSTTSCCS-EEEEEECGGGTBCTTSTTCBCHHHHHHHHHHHHHHHHHTTTSEEEEECCCCC------------CCT----
T ss_pred hhhccCCC-EEEEEeCchHhCCCcccccchHHHHHHHHHHHHHHHHcCCCeEEEEECCHHHHHHHHHHcCCCcccc----
Confidence 58888765 999999999999863 7899999999999998 69999999999999998888775431
Q ss_pred CCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecH
Q 007903 162 ITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDV 241 (585)
Q Consensus 162 vt~~~~l~~~~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~ 241 (585)
... +....+.++..+++. |.++|++ ++++++.+++| + . | | ++.++.
T Consensus 92 ---~~~---~~vt~g~l~~~l~~~---------l~~~G~~----a~~l~~~~~~~-t-~--------d----g-~~~~~~ 137 (286)
T 3d40_A 92 ---LAG---LTEATFEVKKRWAEK---------LRGIGVD----AFPLQLAAMCT-L-R--------N----G-IPQLRS 137 (286)
T ss_dssp ---THH---HHHHHHHHHHHHHHH---------HHHTTCC----EEECCGGGTEE-E-E--------T----T-EEEECC
T ss_pred ---hhc---chhhHHHHHHHHHHH---------HHHcCCc----EEEEEeecCCc-c-c--------C----C-eEEehH
Confidence 111 122346677667664 5788987 68888888775 2 1 1 3 677899
Q ss_pred HHHHHHHcCCCeEEEcC-CccCCCCceeeeChHHHHHHHHHH-cCCCEEEEeecccccC-C---CCcccccccHHHHHHH
Q 007903 242 TRMRERLDGGCLVILSN-LGYSSSGEVLNCNTYEVATACALA-IEADKLICIIDGPILD-E---SGHLIRFLTLQEADSL 315 (585)
Q Consensus 242 ~~I~~lL~~G~IPVi~~-v~~~~~G~~~nid~D~lAa~lA~~-L~AdkLIilTDV~gl~-~---~~~lI~~it~~e~~~l 315 (585)
+.|+.||++|+|||+++ ++.+++|+++|+|+|++|+++|.+ |+||+|+|+|||||++ . ++++|++|+..|++++
T Consensus 138 ~~i~~lL~~g~IpVi~gd~~~~~~g~~~~~~~D~~Aa~lA~~~l~Ad~LiilTDVdGVy~~dP~~a~~i~~is~~e~~~l 217 (286)
T 3d40_A 138 EVLRDVLDHGALPVLAGDALFDEHGKLWAFSSDRVPEVLLPMVEGRLRVVTLTDVDGIVTDGAGGDTILPEVDARSPEQA 217 (286)
T ss_dssp SHHHHHHHTTCEEEEECEEEEBTTSCEEEECGGGHHHHTTTTCCSCEEEEEEESSSSCEECC---CEECCEEETTSCHHH
T ss_pred HHHHHHHHCcCEEEEcCCeEEcCCCCEEeeCHHHHHHHHHHhhCCCCEEEEecCCCeeEcCCCCCCcCCcccCHHHHHHH
Confidence 99999999999999998 888889999999999999999999 9999999999999983 3 3899999999887777
Q ss_pred HHhhchhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccc
Q 007903 316 IRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLS 395 (585)
Q Consensus 316 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~ 395 (585)
++.-. ..++.+.+| |
T Consensus 218 ~~~~~-----------------------------------------------~~~~~~~tg-g----------------- 232 (286)
T 3d40_A 218 YAALW-----------------------------------------------GSSEWDATG-A----------------- 232 (286)
T ss_dssp HHHHH-----------------------------------------------HSCC----C-H-----------------
T ss_pred HHhhc-----------------------------------------------cccCCcccC-c-----------------
Confidence 54210 011233445 5
Q ss_pred cccCcHHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhc-----CCC-ceeeccc
Q 007903 396 RLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKR-----DGM-GTMVASD 446 (585)
Q Consensus 396 ~~~~m~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~-----~~~-GT~i~~d 446 (585)
|.+|++||..|++.|++ ++|+||..++.| .++|++ +.+ ||.|..+
T Consensus 233 ----M~~Kl~Aa~~a~~~gv~-v~I~~g~~p~~l-~~l~t~~~~~~~~~~~t~i~~~ 283 (286)
T 3d40_A 233 ----MHTKLDALVTCARRGAE-CFIMRGDPGSDL-EFLTAPFSSWPAHVRSTRITTT 283 (286)
T ss_dssp ----HHHHHHHHHHHHHTTCE-EEEEECCTTCCC-GGGGSCGGGSCTTCCCEEEEC-
T ss_pred ----HHHHHHHHHHHHHCCCc-EEEEeCCCCCcH-HHHhcCcccCcccccceeeeec
Confidence 99999999999999998 999999999985 899998 676 9999765
|
| >4axs_A Carbamate kinase; oxidoreductase; 2.50A {Mycoplasma penetrans} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-33 Score=293.49 Aligned_cols=261 Identities=15% Similarity=0.170 Sum_probs=193.3
Q ss_pred CCeEEEEeCCccCCCCC------hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHH-
Q 007903 99 GGTFVVIISGEIVSSPY------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA- 171 (585)
Q Consensus 99 ~k~iVIKlGGs~l~~~~------l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~- 171 (585)
+|+||||+|||+|.++. ++.++++|+.|.+.|++|||||||||||+.++..++....+..+.+. ..++++
T Consensus 24 MkRIVIklGGnAL~~~~~~q~~~~~~~a~~Ia~L~~~G~~vVvVHGgGPQVG~i~~~l~~~~~~~~~~~~---~~l~~~~ 100 (332)
T 4axs_A 24 MSRIVIALGGNALGDNPSQQKELVKIPAAKIAALIQEGHEVIVGHGNGPQVGMIFNAFADAKKANEKTAL---VPFAEAG 100 (332)
T ss_dssp --CEEEEECGGGGCSSHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHTTTTTSCCCC---CCHHHHH
T ss_pred cceEEEEEChhhcCCChHHHHHHHHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHhccccCCCCC---chhHHHH
Confidence 47899999999998741 67899999999999999999999999999887766544433333333 334443
Q ss_pred HHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcc----eeEEeeecCcceeee-eecccc-----------------cccc
Q 007903 172 MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRW----HEVGVSVASGNFLAA-KRKGVV-----------------DGVD 229 (585)
Q Consensus 172 ~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~----~av~l~~~dg~~~~a-~~~g~~-----------------~g~d 229 (585)
.+.+|.+.+.|+..|.+ .|.++|++.++ .++.++..|..|... |+.|.. +...
T Consensus 101 a~tqg~ig~~l~~~l~~-----~l~~~gi~~~v~~~vtqv~V~~~D~af~~p~K~iG~~~~~~ea~~l~~~~~~~~~~~~ 175 (332)
T 4axs_A 101 GMSQGYIGYHMLTAISN-----ELKKLNIQKDVLYFLTQTIVDANDPAFKNPTKPVGPFYSSKEIAEANNPNSVIVEDAG 175 (332)
T ss_dssp HHHHHHHHHHHHHHHHH-----HHHHTTCCCCEEECCCEEEECTTCHHHHSCCEECSCCCC--------CTTSCCC----
T ss_pred HHHHHHHHHHHHHHHHH-----HHHhcCCCcceeeeeeeeeecccchhhhCcCceeccccCHHHHHHHHhcCCEEEEccC
Confidence 45778888888888754 78888887543 357788888666542 333311 1111
Q ss_pred C------cceeeEEEecHHHHHHHHcCCCeEEEcC-----C---ccCCCCceeeeChHHHHHHHHHHcCCCEEEEeeccc
Q 007903 230 Y------GATGEVKKVDVTRMRERLDGGCLVILSN-----L---GYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP 295 (585)
Q Consensus 230 ~------g~~G~v~~v~~~~I~~lL~~G~IPVi~~-----v---~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~ 295 (585)
. +.++.++.++.+.|+.|+++|+|||+++ + ..+.+|+.+|+|+|++|+.||.+|+||+||||||||
T Consensus 176 ~g~rrvV~sp~p~~ive~~~I~~L~~~g~Ivi~~ggggipv~~~~~~~~G~~~vid~D~~Aa~lA~~l~Ad~LiiLTdV~ 255 (332)
T 4axs_A 176 RGFRKVVASPIPVDFIGIDAIKQNVNNGCVCIVGGGGGIPTIIQDNQYIGVDGVIDKDFALAKIADAVNADIFVVLTAVD 255 (332)
T ss_dssp ----CEECCCCEEEETTHHHHHHHHHTTCEEECCGGGCEEEEESSSCEEECSSCCCHHHHHHHHHHHTTCSEEEEECSCS
T ss_pred CCceEECCCCCCceeecHHHHHHhhcCCeEEEecccCCCCccccCCcccCceeeechHHHHHHHHHHhCCceEEEEecCC
Confidence 2 2334567889999999999999998753 2 122357788999999999999999999999999999
Q ss_pred ccC-----CCCcccccccHHHHHHHHHhhchhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCC
Q 007903 296 ILD-----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNG 370 (585)
Q Consensus 296 gl~-----~~~~lI~~it~~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (585)
|++ |++++|++++.+|+++++.++.
T Consensus 256 gv~~~~~~~~~~~i~~it~~e~~~~~~~g~-------------------------------------------------- 285 (332)
T 4axs_A 256 YVYVDFNKPTQKALKTVDVKALNNFINQDQ-------------------------------------------------- 285 (332)
T ss_dssp SCEESTTSTTCEECSSCBHHHHHHHHHTTC--------------------------------------------------
T ss_pred ceEcCCCCcchhhcccCCHHHHHHHHHCCC--------------------------------------------------
Confidence 982 4578999999999999986532
Q ss_pred ccccCCCCCcccccccccccccccccccCcHHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeecc
Q 007903 371 VGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (585)
Q Consensus 371 ~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~~ 445 (585)
|++| | |.|||+||+.|++.|+.+++|+.. .+. +.+++.+ +.||+|.+
T Consensus 286 --~~~G-g---------------------M~pKv~Aa~~~v~~g~g~~~iI~~--~~~-~~~~l~g-~~GT~IvA 332 (332)
T 4axs_A 286 --FAKG-S---------------------MLPKIKAAMGFVNGHPNRSAIIAD--LSK-VEDALKG-LSGTKIIA 332 (332)
T ss_dssp --SCTT-T---------------------THHHHHHHHHHHTTCTTCEEEEEC--STT-HHHHTTT-SSSEEEBC
T ss_pred --cCcC-C---------------------cHHHHHHHHHHHHhCCCcEEEECC--HHH-HHHHHCC-CCCcEEeC
Confidence 3345 5 899999999999999987777743 233 5666654 68999863
|
| >3kzf_A Carbamate kinase; arginine dihydrolase pathway, giardia LAMB target, transferase; 3.00A {Giardia lamblia atcc 50803} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-34 Score=291.73 Aligned_cols=258 Identities=16% Similarity=0.171 Sum_probs=199.2
Q ss_pred CCeEEEEeCCccCCC--C--C-------hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHH
Q 007903 99 GGTFVVIISGEIVSS--P--Y-------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSES 167 (585)
Q Consensus 99 ~k~iVIKlGGs~l~~--~--~-------l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rvt~~~~ 167 (585)
+|++||+|||++|.. + . ++..++.|+.|.+.|+++|||||+|||++.++........ ..++..
T Consensus 5 ~~~ivvalgGnal~~~g~~~~~~~q~~~v~~~a~~i~~~~~~g~~vvi~hGnGPQVG~i~~~~~~~~~------~~~~~p 78 (317)
T 3kzf_A 5 GKTVVIALGGNAMLQAKEKGDYDTQRKNVEIAASEIYKIHKAGYKVVLTSGNGPQVGAIKLQNQAAAG------VSPEMP 78 (317)
T ss_dssp CCEEEEECCSTTTC--CCCCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHSTTS------SSCCCC
T ss_pred CCEEEEEcChhhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHHhccc------cCCCCC
Confidence 579999999999953 1 1 5788999999999999999999999999987665442221 135667
Q ss_pred HHHH-HHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcce----eEEeeecCcceee-eeecccc----------------
Q 007903 168 LAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWH----EVGVSVASGNFLA-AKRKGVV---------------- 225 (585)
Q Consensus 168 l~~~-~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~----av~l~~~dg~~~~-a~~~g~~---------------- 225 (585)
|+.+ .+++|.+.++|+++|++ .|.++|++.++. ++.+...|..|-. .||.|.+
T Consensus 79 ld~~~A~sqG~igy~l~~al~~-----~l~~~g~~~~v~t~itq~~Vd~~Dpaf~~PtKpiG~~y~~~ea~~~~~~~~~~ 153 (317)
T 3kzf_A 79 LHVCGAMSQGFIGYMMSQAMDN-----VFCANNEPANCVTCVTQTLVDPKDQAFTNPTKPVGRFYTEQEAKDLMAANPGK 153 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-----HHHHTTCCCCEEEBCCEEEECTTCGGGTSCCEECC------------------
T ss_pred ccccCchhhHHHHHHHHHHHHH-----HHHhcCCCCceeEEEEEEEECCCCccccCCCCCcCCCCCHHHHHHHHHhccCC
Confidence 8886 67999999999888864 888999987764 4567777877664 3454521
Q ss_pred ---ccccCccee------eEEEecHHHHHHHHcCCCeEEEc-----CCccC---CCCceeeeChHHHHHHHHHHcCCCEE
Q 007903 226 ---DGVDYGATG------EVKKVDVTRMRERLDGGCLVILS-----NLGYS---SSGEVLNCNTYEVATACALAIEADKL 288 (585)
Q Consensus 226 ---~g~d~g~~G------~v~~v~~~~I~~lL~~G~IPVi~-----~v~~~---~~G~~~nid~D~lAa~lA~~L~AdkL 288 (585)
+....||.- .++.||.+.|+.||++|+|||++ |+..+ .+|..+|+|+|++|+++|.+|+||+|
T Consensus 154 ~~~ed~grg~RrvV~sP~P~~iVe~~~I~~LL~~G~IvI~aGGgGiPv~~~~~~~~G~~~~id~D~~Aa~lA~~L~AD~L 233 (317)
T 3kzf_A 154 ILREDAGRGWRVVVPSPRPLEIVEYGVIKTLIDNNVLVICTNGGGIPCKRENKVISGVDAVIDKDLATSLLAKTLNSDYL 233 (317)
T ss_dssp --------CCCCEECCCCEEEETTHHHHHHHHHTTCEEECCGGGCEEEEECSSCEEECSCCCCHHHHHHHHHHHHTCSCE
T ss_pred eEeecCCCCeeeecCCCCCcceECHHHHHHHHHCCCEEEEeCCCCCCcccCCCcccceEEeccHHHHHHHHHHHhCCCEE
Confidence 000112332 24789999999999999999888 66554 23567899999999999999999999
Q ss_pred EEeecccccC-----CCCcccccccHHHHHHHHHhhchhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccch
Q 007903 289 ICIIDGPILD-----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERR 363 (585)
Q Consensus 289 IilTDV~gl~-----~~~~lI~~it~~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (585)
||||||||++ +++++|++++.+|+++++.++.
T Consensus 234 IiLTDVdGVy~dp~~p~a~~I~~it~~e~~~li~~g~------------------------------------------- 270 (317)
T 3kzf_A 234 MILTDVLNACINYKKPDERKLEEIKLSEILALEKDGH------------------------------------------- 270 (317)
T ss_dssp EECCSSSSCEESSSCSSCEECCEEEHHHHHHHHTTTS-------------------------------------------
T ss_pred EEecCCCeeeCCCCCCCCeECcCcCHHHHHHHHhcCC-------------------------------------------
Confidence 9999999983 5789999999999988874311
Q ss_pred hccccCCccccCCCCCcccccccccccccccccccCcHHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceee
Q 007903 364 IATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 443 (585)
Q Consensus 364 ~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i 443 (585)
+.+| | |.+||+||+.|++.|+.++||+|+.. +.++|+++ .||+|
T Consensus 271 ---------~~~G-G---------------------M~pKl~AA~~av~~gg~~v~I~s~~~----l~~~l~G~-~GT~I 314 (317)
T 3kzf_A 271 ---------FAAG-S---------------------MGPKVRAAIEFTQATGKMSIITSLST----AVDALNGK-CGTRI 314 (317)
T ss_dssp ---------CC---C---------------------CHHHHHHHHHHHHHHCCCEEECCGGG----HHHHHTTS-SSEEE
T ss_pred ---------CCCC-C---------------------HHHHHHHHHHHHHcCCCeEEEcchHH----HHHHHCCC-CCeEE
Confidence 2345 5 89999999999999999999999642 66888765 89999
Q ss_pred ccc
Q 007903 444 ASD 446 (585)
Q Consensus 444 ~~d 446 (585)
.+|
T Consensus 315 ~~d 317 (317)
T 3kzf_A 315 IKD 317 (317)
T ss_dssp ECC
T ss_pred ecC
Confidence 865
|
| >3ll5_A Gamma-glutamyl kinase related protein; alternate mevalonate pathway, isopentenyl phsophate kinase, beta-alpha sandwich fold; HET: MSE ADP IPE ATP IP8; 1.99A {Thermoplasma acidophilum} PDB: 3lkk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-34 Score=290.28 Aligned_cols=227 Identities=13% Similarity=0.092 Sum_probs=176.6
Q ss_pred CCeEEEEeCCccCCCCC---------hHHHHHHHHHHHHCCCeEE-EEeCchHHHHHHHHHcCCcccccCCccCCCHHHH
Q 007903 99 GGTFVVIISGEIVSSPY---------LDPILKDIAFLHHLGIRFV-LVPGTHVQIDKLLSERGHEAKYLGRYRITDSESL 168 (585)
Q Consensus 99 ~k~iVIKlGGs~l~~~~---------l~~l~~~Ia~L~~~G~~vV-lVhGgg~~i~~~l~~~g~~~~~~~g~rvt~~~~l 168 (585)
.|++|||+||+++++++ ++.++++|+. |+++| ||||||++++.+++++|+++++++ ++...|
T Consensus 3 ~k~iViKiGG~~l~~~~~~~~l~~~~l~~l~~~i~~----G~~vv~lVhGGG~~~~~~~~~~gi~~~~~~----~d~~gl 74 (249)
T 3ll5_A 3 FTMMILKIGGSVITDKSAYRTARTYAIRSIVKVLSG----IEDLVCVVHGGGSFGHIKAMEFGLPGPKNP----RSSIGY 74 (249)
T ss_dssp -CCEEEEECHHHHBCTTSTTCBCHHHHHHHHHHHHT----CTTEEEEEECCGGGTHHHHHHHTCSEECCH----HHHHHH
T ss_pred ceEEEEEECccEEecCcccccchHHHHHHHHHHHhc----CCceEEEEECccHHHHHHHHHhCCCcCCCc----cccccH
Confidence 58999999999999852 5677777764 99999 999999999999999999987643 677788
Q ss_pred HHHHHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHH
Q 007903 169 AAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERL 248 (585)
Q Consensus 169 ~~~~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL 248 (585)
.++.+++.++|..++++ |.++|++ ++++++.|. +++|++ +.+.|+.||
T Consensus 75 ~~t~~~~~~ln~~~v~~---------l~~~G~~----a~~l~~~~~----------------~~~g~v---~~~~i~~ll 122 (249)
T 3ll5_A 75 SIVHRDMENLDLMVIDA---------MIEMGMR----PISVPISAL----------------RYDGRF---DYTPLIRYI 122 (249)
T ss_dssp HHHHHHHHHHHHHHHHH---------HHHTTCC----EEECCGGGS----------------CBSSSB---CCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH---------HHHCCCc----EEEEcHHHc----------------ccccEE---cHHHHHHHH
Confidence 87755567888888764 5789987 778777653 335666 889999999
Q ss_pred cCCCeEEEcC-CccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC-------CCCcccccccHHHHHHHHHhhc
Q 007903 249 DGGCLVILSN-LGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRV 320 (585)
Q Consensus 249 ~~G~IPVi~~-v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~-------~~~~lI~~it~~e~~~li~~~~ 320 (585)
++|+|||++| +..+.+|+++|+|+|++|+++|.+|+||+|+|+|||||++ |++++|++++. +++...
T Consensus 123 ~~g~ipVi~~~~~~~~~~~~~~~~~D~~Aa~lA~~l~Ad~li~ltdvdGv~~~dp~~~~~a~~i~~i~~-~~~~~~---- 197 (249)
T 3ll5_A 123 DAGFVPVSYGDVYIKDEHSYGIYSGDDIMADMAELLKPDVAVFLTDVDGIYSKDPKRNPDAVLLRDIDT-NITFDR---- 197 (249)
T ss_dssp HTTCEEEEECEEEEEETTEEEEECHHHHHHHHHHHHCCSEEEEEESSSSCBSSCTTTCTTCCBCCEECC-CC--------
T ss_pred HCCCEEEECCCEEEcCCCceeeecHHHHHHHHHHhcCCCEEEEEeCCCccCCCCCCCCCCcEEHHHHHH-HHhccc----
Confidence 9999999998 3445567889999999999999999999999999999983 23567777731 111111
Q ss_pred hhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccCc
Q 007903 321 KQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGY 400 (585)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m 400 (585)
.+.+.+| | |
T Consensus 198 -------------------------------------------------~~~~~tG-g---------------------M 206 (249)
T 3ll5_A 198 -------------------------------------------------VQNDVTG-G---------------------I 206 (249)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -------------------------------------------------CCCeeEC-C---------------------H
Confidence 0112345 5 9
Q ss_pred HHHHHHHHHH-HHcCCCeEEEecCccchhhHHHHHhcCCC-ceeec
Q 007903 401 LSELAAAAFV-CRRGVQRVHLLDGTIGGVLLLELFKRDGM-GTMVA 444 (585)
Q Consensus 401 ~~kl~aa~~a-~~~Gv~~v~I~~g~~~~~ll~el~~~~~~-GT~i~ 444 (585)
.+||+||..| ++.|+ ++||+||+.++.|+. +.+++. ||+|.
T Consensus 207 ~~Kl~aA~~a~~~~Gv-~v~I~~g~~~~~l~~--l~g~~~~GT~i~ 249 (249)
T 3ll5_A 207 GKKFESMVKMKSSVKN-GVYLINGNHPERIGD--IGKESFIGTVIR 249 (249)
T ss_dssp HHHHHHHHHHHTTCTT-CEEEEETTSGGGGGG--TTSTTCCSEEEC
T ss_pred HHHHHHHHHHHHhcCC-EEEEEeCCChhHHHH--hCCCCCCCEEeC
Confidence 9999999999 89999 699999999999776 557888 99983
|
| >2j5v_A Glutamate 5-kinase; proline biosynthesis, gamma glutamyl kinase, amino-acid biosynthesis, transferase, feedback regulation, PUA domain; HET: RGP; 2.5A {Escherichia coli} PDB: 2j5t_A* 2w21_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-32 Score=291.40 Aligned_cols=295 Identities=18% Similarity=0.217 Sum_probs=192.9
Q ss_pred CCeEEEEeCCccCCCC-------ChHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHH
Q 007903 99 GGTFVVIISGEIVSSP-------YLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA 171 (585)
Q Consensus 99 ~k~iVIKlGGs~l~~~-------~l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~ 171 (585)
.+++|||+||++|+++ .+..++++|+.|++.|+++|||||||++. .+.+++++.+ ..+...++++
T Consensus 4 ~k~iVIKiGGs~l~~~~~~~~~~~l~~la~~Ia~l~~~G~~vVlV~gGgi~~--g~~~lg~~~~------~~~l~~~qa~ 75 (367)
T 2j5v_A 4 SQTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHAAGHRIVIVTSGAIAA--GREHLGYPEL------PATIASKQLL 75 (367)
T ss_dssp CCEEEEEECHHHHTTTSSSCCHHHHHHHHHHHHHHHHTTCEEEEEECCHHHH--HHHHHTSCCC------CSSHHHHHHH
T ss_pred CCEEEEEECcHHhcCCCCCcCHHHHHHHHHHHHHHHhCCCcEEEEEcCHHHH--HHHHcCCCCC------CCCHHHHHHH
Confidence 4799999999999984 27899999999999999999999999664 5678888652 2344444433
Q ss_pred HHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecH-HHHHHHHcC
Q 007903 172 MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDV-TRMRERLDG 250 (585)
Q Consensus 172 ~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~-~~I~~lL~~ 250 (585)
+++||.. ++..|. ..|.++|++ +.++..... | +.++++++|. +.|++||+.
T Consensus 76 -aavGq~~--l~~~~~-----~~l~~~G~~----~~qvllt~~--------------d--~~~~~r~~n~~~~i~~LL~~ 127 (367)
T 2j5v_A 76 -AAVGQSR--LIQLWE-----QLFSIYGIH----VGQMLLTRA--------------D--MEDRERFLNARDTLRALLDN 127 (367)
T ss_dssp -HHHHHHH--HHHHHH-----HHHHTTTCC----EEEEEECGG--------------G--GSSHHHHHHHHHHHHHHHHT
T ss_pred -HHHHHHH--HHHHHH-----HHHHHcCCc----eEEEEEecc--------------c--ccCceEEEhHHHHHHHHHHC
Confidence 4677753 455553 268889987 222222111 1 2344556676 999999999
Q ss_pred CCeEEEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC-------CCCcccccccH--HHHHHHHHhhch
Q 007903 251 GCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTL--QEADSLIRQRVK 321 (585)
Q Consensus 251 G~IPVi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~-------~~~~lI~~it~--~e~~~li~~~~~ 321 (585)
|+|||+++...-..+++.++|+|++|+++|.+|+||+|+++|||||++ |++++|++++. +|+++++..
T Consensus 128 g~IPIv~end~v~~~el~~gd~D~lAa~vA~~l~Ad~LiilTDVdGvy~~dP~~~p~a~~I~~i~~~~~e~~~l~~~--- 204 (367)
T 2j5v_A 128 NVVPVINENDAVATAEIKVGDNDNLSALAAILAGADKLLLLTDQKGLYTADPRSNPQAELIKDVYGIDDALRAIAGD--- 204 (367)
T ss_dssp TCEEEEEECTTSCCGGGCCCSHHHHHHHHHHHHTCSEEEEEECC------------------------------------
T ss_pred CCEEEECCCCceecccccCCCHHHHHHHHHHhcCCCEEEEeecCCceECCCCCCCCCCeEeeeeCCCHHHHHHHhhc---
Confidence 999999932211223678999999999999999999999999999983 36899999998 777666432
Q ss_pred hhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccCcH
Q 007903 322 QSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYL 401 (585)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~ 401 (585)
.++.+++| | |.
T Consensus 205 -----------------------------------------------~~s~~gtG-g---------------------M~ 215 (367)
T 2j5v_A 205 -----------------------------------------------SVSGLGTG-G---------------------MS 215 (367)
T ss_dssp ------------------------------------------------------------------------------CH
T ss_pred -----------------------------------------------cCCCcCcC-c---------------------cH
Confidence 12335566 5 89
Q ss_pred HHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeeccccc-ccccccc----------ccCHHHHHHHHHHHH
Q 007903 402 SELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLY-EGTRTAK----------VTDLSGIKQIIQPLV 470 (585)
Q Consensus 402 ~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~~d~~-~~IR~at----------~~D~~~I~~Li~~~~ 470 (585)
+||+||..|++.|++ ++|++|..++. |.++|++++.||+|.++.. ..-|+.+ .-|..+...|. .
T Consensus 216 ~Kl~Aa~~a~~~Gv~-v~I~~g~~~~~-L~~~l~g~~~GT~i~~~~~~~~~rk~w~~~~~~~G~v~vD~gA~~al~---~ 290 (367)
T 2j5v_A 216 TKLQAADVACRAGID-TIIAAGSKPGV-IGDVMEGISVGTLFHAQATPLENRKRWIFGAPPAGEITVDEGATAAIL---E 290 (367)
T ss_dssp HHHHHHHHHHHTTCE-EEEEETTSTTH-HHHHHHTCCCSEEECCCSSCCCGGGGGGGTCCCSCEEEECHHHHHHHH---H
T ss_pred HHHHHHHHHHHcCCC-EEEEcCCCchH-HHHHhcCCCCcEEEEcCccccchhheeeeccCCCCEEEECcCHHHHHH---h
Confidence 999999999999998 99999999998 5899999999999987532 2223322 22666776662 1
Q ss_pred HccccccCCHHHHHhcc---CeEEEEEECCeEEEEEEEe
Q 007903 471 ESGALVRRTDEELLKAL---DSFYVVEREGQIIACAALF 506 (585)
Q Consensus 471 ~~~~~~~~~~e~l~~~i---~~~~Va~~dg~IVG~~~l~ 506 (585)
....+++.....++..| +.+.+.+.+|+.+|.+...
T Consensus 291 ~g~sLl~~Gi~~v~g~F~~gd~V~i~~~~g~~ia~G~~~ 329 (367)
T 2j5v_A 291 RGSSLLPKGIKSVTGNFSRGEVIRICNLEGRDIAHGVSR 329 (367)
T ss_dssp HCCCBCGGGEEEEESCCCTTCEEEEEETTCCEEEEEECS
T ss_pred CCCccCCcccEEEECcccCCCEEEEECCCCCEEEEEEec
Confidence 22234444444455555 5677888899999998876
|
| >2ogx_A Molybdenum storage protein subunit alpha; open alpha/beta structure, metal binding protein; HET: ATP; 1.60A {Azotobacter vinelandii} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.8e-32 Score=276.50 Aligned_cols=228 Identities=18% Similarity=0.143 Sum_probs=178.4
Q ss_pred HHHhhhHHHhhcCCeEEEEeCCccCCCC---ChHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCC
Q 007903 87 FREAWPYLWAHRGGTFVVIISGEIVSSP---YLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRIT 163 (585)
Q Consensus 87 ~r~a~~yi~~~r~k~iVIKlGGs~l~~~---~l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rvt 163 (585)
=.+++|||+.|++ ++|||+||+ ++++ .+..++++|+.|+ .|+++|||||||++++..++ ++.+ .|+
T Consensus 28 ~~~~~pyi~~~~~-~iVIKiGGs-l~~~~~~~l~~l~~~I~~l~-~G~~vVlV~GGg~~~~~~~~-~~~~----~gl--- 96 (276)
T 2ogx_A 28 PVAGKRPIRLLPW-LQVVKIGGR-VMDRGADAILPLVEELRKLL-PEHRLLILTGAGVRARHVFS-VGLD----LGL--- 96 (276)
T ss_dssp ---CCCCCCSSTT-EEEEEECHH-HHTTTHHHHHHHHHHHHHHT-TTCEEEEEECCTHHHHHHHH-HHHH----TTC---
T ss_pred hcccCchhhhcCC-eEEEEEChh-hcCCCHHHHHHHHHHHHHHh-CCCeEEEEECcHHHHHHHHh-ccCc----CCC---
Confidence 3568999999999 999999999 8774 3899999999998 79999999999999988776 4443 222
Q ss_pred CHHHHHHHHHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHH
Q 007903 164 DSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTR 243 (585)
Q Consensus 164 ~~~~l~~~~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~ 243 (585)
+..+++.+....+++|..+++.| +..+|++ ++.+ ..+.+.
T Consensus 97 ~~~~l~~v~~~~~~~n~~l~~~l--------l~~~g~~----~v~~----------------------------~~~~~~ 136 (276)
T 2ogx_A 97 PVGSLAPLAASEAGQNGHILAAM--------LASEGVS----YVEH----------------------------PTVADQ 136 (276)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHH--------HGGGTCC----BCCH----------------------------HHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHH--------HHhcCCC----cccc----------------------------cChHHH
Confidence 45677776555678888888764 4466654 1100 126789
Q ss_pred HHHHHcCCCeEEEcCC-ccC--CC-Cc-eeeeChHHHHHHHHHHcCCCEEEEeeccccc---CCC------CcccccccH
Q 007903 244 MRERLDGGCLVILSNL-GYS--SS-GE-VLNCNTYEVATACALAIEADKLICIIDGPIL---DES------GHLIRFLTL 309 (585)
Q Consensus 244 I~~lL~~G~IPVi~~v-~~~--~~-G~-~~nid~D~lAa~lA~~L~AdkLIilTDV~gl---~~~------~~lI~~it~ 309 (585)
|+.||++|.|||+++. +++ +. |+ +.|+|+|++|+++|.+|+||+|+++|||||+ ||+ +++|++++.
T Consensus 137 i~~lL~~g~IpVi~~~~~~~~~e~~G~~~~~~~~D~~Aa~lA~~l~Ad~LiilTDVdGvy~~dP~~~~~~~a~~i~~i~~ 216 (276)
T 2ogx_A 137 LAIHLSATRAVVGSAFPPYHHHEFPGSRIPPHRADTGAFLLADAFGAAGLTIVENVDGIYTADPNGPDRGQARFLPETSA 216 (276)
T ss_dssp HHHHHHHSSEEEEESSCTTGGGCCSSSSSCSSCHHHHHHHHHHHHTCSEEEEEESSSSEESSCTTSTTGGGCCEESEEEH
T ss_pred HHHHHhCCCEEEEcCCcccccccccCCcCCCCChHHHHHHHHHHcCCCEEEEEeCCCccCCCCCCccCCCCCeEcceeCH
Confidence 9999999999999983 444 32 33 4899999999999999999999999999998 343 899999998
Q ss_pred HHHHHHHHhhchhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccc
Q 007903 310 QEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIG 389 (585)
Q Consensus 310 ~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~ 389 (585)
+|+++++ ++| |
T Consensus 217 ~e~~~~~---------------------------------------------------------g~g-g----------- 227 (276)
T 2ogx_A 217 TDLAKSE---------------------------------------------------------GPL-P----------- 227 (276)
T ss_dssp HHHHTSC---------------------------------------------------------SCC-S-----------
T ss_pred HHHHHHh---------------------------------------------------------CcC-C-----------
Confidence 8765442 124 5
Q ss_pred cccccccccCcHHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeeccc
Q 007903 390 GQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446 (585)
Q Consensus 390 ~~~~~~~~~~m~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~~d 446 (585)
|.+|+.+++.+++.|+ +++|+||..++.| .++|++++.||+|.++
T Consensus 228 ----------M~~K~~~~~~~~~~~~-~v~I~~g~~~~~l-~~~l~g~~~GT~i~~~ 272 (276)
T 2ogx_A 228 ----------VDRALLDVMATARHIE-RVQVVNGLVPGRL-TAALRGEHVGTLIRTG 272 (276)
T ss_dssp ----------SCHHHHHHHHTCSSCC-EEEEEETTSTTHH-HHHHTTCCCSEEEECS
T ss_pred ----------hHHHHHHHHHHhcCCC-eEEEEECCCccHH-HHHHcCCCCceEEccC
Confidence 8899988887777776 6999999999985 6777888999999865
|
| >2ako_A Glutamate 5-kinase; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: ADP; 2.20A {Campylobacter jejuni} SCOP: c.73.1.3 | Back alignment and structure |
|---|
Probab=99.97 E-value=9.1e-32 Score=271.28 Aligned_cols=229 Identities=15% Similarity=0.149 Sum_probs=172.7
Q ss_pred CeEEEEeCCccCC-----CCC-hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHHHH
Q 007903 100 GTFVVIISGEIVS-----SPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAME 173 (585)
Q Consensus 100 k~iVIKlGGs~l~-----~~~-l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~~~ 173 (585)
|++|||+||++++ ++. ++.++++|+.|++. +++|||||||++ ..+..++++. .++++.+ +++
T Consensus 2 k~iViKlGGs~l~~~~~~~~~~~~~~~~~i~~l~~~-~~vVlVhgGg~~--~~~~~~g~~~-----~~~~~~~----~l~ 69 (251)
T 2ako_A 2 KRIVVKVGSHVISEENTLSFERLKNLVAFLAKLMEK-YEVILVTSAAIS--AGHTKLDIDR-----KNLINKQ----VLA 69 (251)
T ss_dssp CEEEEEECHHHHBCSSSBCHHHHHHHHHHHHHHHHH-SEEEEEECCHHH--HHHHHCCCCS-----SSHHHHH----HHH
T ss_pred CEEEEEeCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEECCHHH--HHHHHhCCcc-----CCchHHH----HHH
Confidence 7899999999999 322 78999999999888 999999999965 5778888875 2333332 223
Q ss_pred HHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecH-HHHHHHHcCCC
Q 007903 174 AAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDV-TRMRERLDGGC 252 (585)
Q Consensus 174 ~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~-~~I~~lL~~G~ 252 (585)
++++ ..+++.|. ..|.++|++ +.++...+++ +.++++++|. +.|+.||+.|+
T Consensus 70 ~~~q--~~l~~~~~-----~~l~~~G~~----~~~i~~~~~~----------------~~~~~~~~~~~~~i~~ll~~g~ 122 (251)
T 2ako_A 70 AIGQ--PFLISVYN-----ELLAKFNKL----GGQILLTGKD----------------FDSRKATKHAKNAIDMMINLGI 122 (251)
T ss_dssp HHHH--HHHHHHHH-----HHHGGGTCC----EEEEEECTGG----------------GGCHHHHHHHHHHHHHHHHTTC
T ss_pred HHHH--HHHHHHHH-----HHHHHcCCc----EEEEEeccch----------------hcCcceEehHHHHHHHHHHCCC
Confidence 4444 33555442 267889987 3344333322 2344556776 99999999999
Q ss_pred eEEEc---CCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC-------CCCcccccccHH--HHHHHHHhhc
Q 007903 253 LVILS---NLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQ--EADSLIRQRV 320 (585)
Q Consensus 253 IPVi~---~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~-------~~~~lI~~it~~--e~~~li~~~~ 320 (585)
|||++ +++.+ +.+++|+|++|+++|.+|+||+|+|+|||||++ +++++|++++.+ |+.+++..
T Consensus 123 ipVi~~~d~v~~~---~~~~~~~D~~Aa~lA~~l~Ad~liilTdVdGVy~~dP~~~~~a~~i~~i~~~~~e~~~~~~~-- 197 (251)
T 2ako_A 123 LPIINENDATAIE---EIVFGDNDSLSAYATHFFDADLLVILSDIDGFYDKNPSEFSDAKRLEKITHIKEEWLQATIK-- 197 (251)
T ss_dssp EEEEEECTTTCCH---HHHBTTTHHHHHHHHHHTTCSEEEEEESSCSCBSSCTTTCTTCCBCCEESCCCGGGC-------
T ss_pred EEEEeCCCceeec---ceeecCchHHHHHHHHhcCCCEEEEEeCCCceeeCCCCCCCCCeEeeEeccchHHHHHHhcc--
Confidence 99999 56553 447999999999999999999999999999982 468999999987 77666432
Q ss_pred hhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccCc
Q 007903 321 KQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGY 400 (585)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m 400 (585)
.++.+++| | |
T Consensus 198 ------------------------------------------------~~~~~~~g-g---------------------m 207 (251)
T 2ako_A 198 ------------------------------------------------TGSEHGTG-G---------------------I 207 (251)
T ss_dssp ----------------------------------------------------CBSC-H---------------------H
T ss_pred ------------------------------------------------cCCCCccC-c---------------------h
Confidence 11223445 5 9
Q ss_pred HHHHHHHHHHHHcCCCeEEEecCccchhhHHH--HHhcCCCceeec
Q 007903 401 LSELAAAAFVCRRGVQRVHLLDGTIGGVLLLE--LFKRDGMGTMVA 444 (585)
Q Consensus 401 ~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~e--l~~~~~~GT~i~ 444 (585)
.+|++||..|++.|++ ++|+||+.++.| .+ +|++++.||+|.
T Consensus 208 ~~k~~aa~~a~~~gv~-v~I~~g~~~~~l-~~~~~~~g~~~GT~i~ 251 (251)
T 2ako_A 208 VTKLKAAKFLLEHNKK-MFLASGFDLSVA-KTFLLEDKQIGGTLFE 251 (251)
T ss_dssp HHHHHHHHHHHHTTCE-EEEEESSSCHHH-HHHHHSCCCCSSEEEC
T ss_pred HHHHHHHHHHHHCCCe-EEEEeCCChhhh-hhhHHhcCCCCceEeC
Confidence 9999999999999998 999999999985 77 899999999983
|
| >4a7w_A Uridylate kinase; transferase; HET: GTP; 1.80A {Helicobacter pylori} PDB: 4a7x_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.7e-30 Score=256.63 Aligned_cols=219 Identities=19% Similarity=0.134 Sum_probs=168.2
Q ss_pred cCCeEEEEeCCccCCCC-------C-hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCC-ccCCCHHHH
Q 007903 98 RGGTFVVIISGEIVSSP-------Y-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGR-YRITDSESL 168 (585)
Q Consensus 98 r~k~iVIKlGGs~l~~~-------~-l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g-~rvt~~~~l 168 (585)
+.+++|||+||++++++ + ++.++++|+.+++.|+++|||||||+.+...... ..| .+.++.+.+
T Consensus 6 ~~k~iViKiGGs~l~~~~~~~~~~~~i~~~a~~I~~l~~~G~~vvlV~gGG~~~~g~~~~-------~~G~~~~~~~~~~ 78 (240)
T 4a7w_A 6 KNKRVLVKFSGEALAGDNQFGIDIHVLDHIAKEIKSLVENDIEVGIVIGGGNIIRGVSAA-------QGGIIRRTSGDYM 78 (240)
T ss_dssp CCCEEEEEECGGGGGTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEECCTTTC----------------CCCHHHHHHH
T ss_pred CCCEEEEEECHHHcCCCCCCCCCHHHHHHHHHHHHHHHHCCCcEEEEECCcHHHhHhHHH-------hcCCCCCCCHHHH
Confidence 46899999999999852 2 7899999999999999999999999877543211 123 233333333
Q ss_pred HHHHHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHH
Q 007903 169 AAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERL 248 (585)
Q Consensus 169 ~~~~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL 248 (585)
+ ++++.+|..+++. .|+++|++ ++++++.|.... .+.+|.+.+.++|
T Consensus 79 ~---~la~~~n~~l~~~--------~l~~~G~~----av~lt~~d~~~~------------------~~~~~~~~i~~lL 125 (240)
T 4a7w_A 79 G---MLATVINAVAMQE--------ALEHIGLD----TRVQSAIEIKEI------------------CESYIYRKAIRHL 125 (240)
T ss_dssp H---HHHHHHHHHHHHH--------HHHHTTCC----EEEEESSCCTTT------------------SEECCHHHHHHHH
T ss_pred H---HHHHHHHHHHHHH--------HHHHCCCC----EEEecHHHcCcc------------------cCcCcHHHHHHHH
Confidence 3 3567788877743 57899998 788888775321 1235888999999
Q ss_pred cCCCeEEEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC-------CCCcccccccHHHHHHHHHhhch
Q 007903 249 DGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVK 321 (585)
Q Consensus 249 ~~G~IPVi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~-------~~~~lI~~it~~e~~~li~~~~~ 321 (585)
+.|+|||+++. .|. .++|+|++|+++|.+|+||+|+++|||||++ |++++|++++.+|+.+. +
T Consensus 126 ~~g~ipVi~~~----~g~-~~~~~D~~Aa~lA~~l~Ad~li~lTdVdGvy~~dp~~~p~a~~i~~i~~~e~~~~---g-- 195 (240)
T 4a7w_A 126 EKGRVVIFGAG----TGN-PFFTTDTAATLRAIEIGSDLIIKATKVDGIYDKDPNKFKDAKKLDTLSYNDALIG---D-- 195 (240)
T ss_dssp HTTCEEEEEST----TSC-TTSCHHHHHHHHHHHTTCSEEEEEESSSSEESSCTTTCTTCCEESEECHHHHHHS---S--
T ss_pred HCCCEEEEeCC----CCC-CCCChHHHHHHHHHHcCCCEEEEccCCCceECCCCCCCCCCeEcceecHHHHHhc---C--
Confidence 99999999982 233 3689999999999999999999999999982 35789999998775321 1
Q ss_pred hhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccCcH
Q 007903 322 QSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYL 401 (585)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~ 401 (585)
.+ + |
T Consensus 196 -----------------------------------------------------~~-~---------------------m- 199 (240)
T 4a7w_A 196 -----------------------------------------------------IE-V---------------------M- 199 (240)
T ss_dssp -----------------------------------------------------CC-S---------------------S-
T ss_pred -----------------------------------------------------cc-c---------------------c-
Confidence 12 4 5
Q ss_pred HHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeec
Q 007903 402 SELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (585)
Q Consensus 402 ~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~ 444 (585)
+++||..|++.|++ +||+|++.++.|+.+++.++++||+|.
T Consensus 200 -~~~a~~~a~~~gv~-v~I~~g~~~~~l~~~l~g~~g~GT~i~ 240 (240)
T 4a7w_A 200 -DDTAISLAKDNKLP-IVVCNMFKKGNLLQVIKHQQGVFSMVK 240 (240)
T ss_dssp -CHHHHHHHHHTTCC-EEEEESSSTTHHHHHHHHSCSSCEEEC
T ss_pred -HHHHHHHHHHCCCe-EEEECCCCccHHHHHHCCCCCCceeeC
Confidence 57899999999997 999999999999999998899999983
|
| >2j4j_A Uridylate kinase; transferase, nucleoside monophosphate kinase, UMP kinase, aspartokinase fold, pyrimidine nucleotide synthesis; HET: U5P ACP 4TC; 2.1A {Sulfolobus solfataricus} PDB: 2j4k_A* 2j4l_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=8.1e-30 Score=253.09 Aligned_cols=210 Identities=16% Similarity=0.138 Sum_probs=167.4
Q ss_pred CeEEEEeCCccCC--CCC-hHHHHHHHHHHHHCCCeEEEEeCchHHHHHH---HHHcCCcccccCCccCCCHHHHHHHHH
Q 007903 100 GTFVVIISGEIVS--SPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKL---LSERGHEAKYLGRYRITDSESLAAAME 173 (585)
Q Consensus 100 k~iVIKlGGs~l~--~~~-l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~---l~~~g~~~~~~~g~rvt~~~~l~~~~~ 173 (585)
+++|||+||++++ ++. ++.++++|+.|++.|+++|||||||++++.+ +++++++. .+++...+
T Consensus 1 ~~iViK~GGs~l~~~~~~~~~~~~~~i~~l~~~g~~vvlV~ggG~~~~~~~~~~~~~g~~~-----------~~~~~~~~ 69 (226)
T 2j4j_A 1 MNIILKISGKFFDEDNVDNLIVLRQSIKELADNGFRVGIVTGGGSTARRYIKLAREIGIGE-----------AYLDLLGI 69 (226)
T ss_dssp CEEEEEECTHHHHTCCHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHHHHHTTCCH-----------HHHHHHHH
T ss_pred CeEEEEeccccccCCCHHHHHHHHHHHHHHHhCCCeEEEEECcchHhchhHHHHHHhCCCc-----------ccHHHHHH
Confidence 4799999999998 533 8999999999999999999999999999885 67777652 45666555
Q ss_pred HHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHHcCCCe
Q 007903 174 AAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCL 253 (585)
Q Consensus 174 ~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL~~G~I 253 (585)
..+.+|..|++. .|+++|++ + | .++.+.|+++|+.|.|
T Consensus 70 ~~~~~~~~l~~~--------~l~~~g~~----~------~------------------------~~~~~~i~~ll~~g~i 107 (226)
T 2j4j_A 70 WASRLNAYLVMF--------SLQDLAYM----H------V------------------------PQSLEEFIQDWSHGKV 107 (226)
T ss_dssp HHHHHHHHHHHH--------HHTTSBCS----C------C------------------------CSSHHHHHHHHTTSSB
T ss_pred HHHHHHHHHHHH--------HHHHhCCC----C------C------------------------cCCHHHHHHHHHCCCE
Confidence 566777777652 34566653 1 1 1367789999999999
Q ss_pred EEEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC-------CCCcccccccHHHHHHHHHhhchhhhHH
Q 007903 254 VILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIA 326 (585)
Q Consensus 254 PVi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~-------~~~~lI~~it~~e~~~li~~~~~~~~~~ 326 (585)
||+++ + ..|+|+|++|+++|.+|+||+|+|+|||||++ |++++|++++.+|+.+++...
T Consensus 108 pVi~g-g------~~~~~~D~~Aa~lA~~l~Ad~liilTdVdGv~~~dP~~~~~a~~i~~i~~~e~~~l~~~~------- 173 (226)
T 2j4j_A 108 VVTGG-F------QPGQSTAAVAALVAEASSSKTLVVATNVDGVYEKDPRIYADVKLIPHLTTQDLRKILEGS------- 173 (226)
T ss_dssp EEECC-C------STTSCHHHHHHHHHHHTTCSEEEEEESSSSCBSSCTTTSSSCCBCSEEEHHHHHHHHC---------
T ss_pred EEEcC-C------CCCCCcHHHHHHHHHhcCCCEEEEeeccceeeCCCCCCCCCCeEccccCHHHHHHHhhcC-------
Confidence 99999 2 23899999999999999999999999999982 358999999999988775320
Q ss_pred HHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccCc--HHHH
Q 007903 327 ANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGY--LSEL 404 (585)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m--~~kl 404 (585)
++.+| | | .+|+
T Consensus 174 ---------------------------------------------~~~~g-g---------------------m~~~~k~ 186 (226)
T 2j4j_A 174 ---------------------------------------------QSVQA-G---------------------TYELLDP 186 (226)
T ss_dssp ---------------------------------------------------------------------------CCSCH
T ss_pred ---------------------------------------------CCCcC-C---------------------ccccchH
Confidence 12235 5 6 8889
Q ss_pred HHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeecc
Q 007903 405 AAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (585)
Q Consensus 405 ~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~~ 445 (585)
+++..|++.|++ ++|+|+..++.| .++|++++.||+|.+
T Consensus 187 ~a~~~a~~~gi~-v~I~~~~~~~~l-~~~~~g~~~GT~i~~ 225 (226)
T 2j4j_A 187 LAIKIVERSKIR-VIVMNYRKLNRI-IDILKGEEVSSIIEP 225 (226)
T ss_dssp HHHHHHHHTTCE-EEEEEGGGGGGH-HHHHTTCSSCEEEEC
T ss_pred HHHHHHHHCCCe-EEEEeCCChhHH-HHHHcCCCCceEEee
Confidence 999999999998 999999999985 889999999999964
|
| >2ogx_B Molybdenum storage protein subunit beta; open alpha/beta structure, metal binding protein; HET: ATP; 1.60A {Azotobacter vinelandii} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.4e-30 Score=260.61 Aligned_cols=230 Identities=16% Similarity=0.167 Sum_probs=174.5
Q ss_pred HHHHHhhhHHHh--hcCCeEEEEeCCccCCCC---ChHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCC
Q 007903 85 KWFREAWPYLWA--HRGGTFVVIISGEIVSSP---YLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGR 159 (585)
Q Consensus 85 ~~~r~a~~yi~~--~r~k~iVIKlGGs~l~~~---~l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g 159 (585)
+.|.++.||++. +..+++|||+||++++++ .++.++++|+.|++. +++|||||||++.+. +.+++.+. |
T Consensus 20 ~~~~~~~~~~~~~~~m~~~iVIKlGGs~l~~~~~~~~~~la~~I~~l~~~-~~vVlVhGGg~~~~~-~~~~~~~~----g 93 (270)
T 2ogx_B 20 PQLQAAAAAAADFRILPDATVIKIGGQSVIDRGRAAVYPLVDEIVAARKN-HKLLIGTGAGTRARH-LYSIAAGL----G 93 (270)
T ss_dssp HHHHHHHHTSCCCCSSTTEEEEEECTTTTGGGCHHHHHHHHHHHHHHTTT-CEEEEEECCCHHHHH-HHHHHHHT----T
T ss_pred hhhhhhhcccchhhhccCeEEEEechHHhCCCCHHHHHHHHHHHHHHhcC-CcEEEEECChHHHHH-HHHHHHhc----C
Confidence 458999999977 444699999999999974 389999999999876 999999999996644 44444332 2
Q ss_pred ccCCCHHHHHH-HHHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEE
Q 007903 160 YRITDSESLAA-AMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKK 238 (585)
Q Consensus 160 ~rvt~~~~l~~-~~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~ 238 (585)
. +...++. +++++|+.+..+.+. |.++|++ .+ +.
T Consensus 94 --~-~~~~~~~~~~~a~G~~~l~~~~~---------l~~~G~~--------------~v-------------------t~ 128 (270)
T 2ogx_B 94 --L-PAGVLAQLGSSVADQNAAMLGQL---------LAKHGIP--------------VV-------------------GG 128 (270)
T ss_dssp --C-CHHHHHHHHHHHHHHHHHHHHHH---------HGGGTCC--------------BC-------------------CS
T ss_pred --C-ChHHHHHHHHHHHHHHHHHHHHH---------HHhcCCc--------------ee-------------------cH
Confidence 1 3444444 478899988777554 4566754 01 12
Q ss_pred ecHHHHHHHHcCCCeEEEcCC-ccC--C----CCceeeeChHHHHHHHHHHcCCCEEEEeeccccc---C----CCCccc
Q 007903 239 VDVTRMRERLDGGCLVILSNL-GYS--S----SGEVLNCNTYEVATACALAIEADKLICIIDGPIL---D----ESGHLI 304 (585)
Q Consensus 239 v~~~~I~~lL~~G~IPVi~~v-~~~--~----~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl---~----~~~~lI 304 (585)
.|.+.|+++|++|.|||+++. +++ . .|+..++|+|++|+++|.+|+||+|+++|||||+ | |++++|
T Consensus 129 ~d~~~i~~lL~~g~ipVi~g~~g~~~~~~~~~~g~~~~~~~D~~Aa~lA~~l~Ad~Li~lTDVdGvy~~dP~~~~~a~~i 208 (270)
T 2ogx_B 129 AGLSAVPLSLAEVNAVVFSGMPPYKLWMRPAAEGVIPPYRTDAGCFLLAEQFGCKQMIFVKDEDGLYTANPKTSKDATFI 208 (270)
T ss_dssp STTCHHHHHCTTCCEEEEECSCTTGGGCCCCSSSSSCSSCHHHHHHHHHHHHTCSEEEEEESSSSEESSCSSSCTTCCEE
T ss_pred hhHHHHHHHHhCCCEEEEeCCccccccccccccccCCCCCcHHHHHHHHHhcCCCEEEEEeCCCcccCCCCCCCCCCeEc
Confidence 344569999999999999986 333 2 3556779999999999999999999999999998 2 358999
Q ss_pred ccccHHHHHHHHHhhchhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCccccc
Q 007903 305 RFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQ 384 (585)
Q Consensus 305 ~~it~~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~ 384 (585)
++++.+|+++++..+ +.++ | |
T Consensus 209 ~~i~~~e~~~~~~~g---------------------------------------------------~~~~-g-g------ 229 (270)
T 2ogx_B 209 PRISVDEMKAKGLHD---------------------------------------------------SILE-F-P------ 229 (270)
T ss_dssp SEEEHHHHHHTTCCC---------------------------------------------------TTSC-H-H------
T ss_pred ceeCHHHHHHHhcCC---------------------------------------------------Cccc-H-H------
Confidence 999998877664211 0011 2 3
Q ss_pred ccccccccccccccCcHHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeecc
Q 007903 385 GFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (585)
Q Consensus 385 ~~a~~~~~~~~~~~~m~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~~ 445 (585)
|.+|+++|.. ++ ++||+|++.++.| .++|++++.||+|.+
T Consensus 230 ---------------m~~kl~aa~~----~~-~v~I~~g~~~~~l-~~~l~g~~~GT~i~~ 269 (270)
T 2ogx_B 230 ---------------VLDLLQSAQH----VR-EVQVVNGLVPGNL-TRALAGEHVGTIITA 269 (270)
T ss_dssp ---------------HHHHHHHCSS----CC-EEEEEETTSTTHH-HHHHTTCCCSEEEEC
T ss_pred ---------------HHHHHHHhhc----CC-cEEEEeCCCchHH-HHHHcCCCCCeEecC
Confidence 9999998853 44 6999999999985 889999999999975
|
| >2ij9_A Uridylate kinase; structural genomics, protein structure initiative, P nysgxrc; 2.90A {Archaeoglobus fulgidus} SCOP: c.73.1.3 | Back alignment and structure |
|---|
Probab=99.96 E-value=3.9e-29 Score=246.91 Aligned_cols=207 Identities=17% Similarity=0.097 Sum_probs=159.6
Q ss_pred CeEEEEeCCccCCC--CChHHHHHHHHHHHHCCCeEEEEeCchHHHHH---HHHHcCCcccccCCccCCCHHHHHHHHHH
Q 007903 100 GTFVVIISGEIVSS--PYLDPILKDIAFLHHLGIRFVLVPGTHVQIDK---LLSERGHEAKYLGRYRITDSESLAAAMEA 174 (585)
Q Consensus 100 k~iVIKlGGs~l~~--~~l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~---~l~~~g~~~~~~~g~rvt~~~~l~~~~~~ 174 (585)
+++|||+||+++++ +.++.++++|+.|++ |+++|||||||++++. .++++++ ++.+++...++
T Consensus 1 ~~iViK~GGs~l~~~~~~~~~~~~~i~~l~~-g~~vvlV~ggG~~~~~~~~~~~~~g~-----------~~~~l~~~~~~ 68 (219)
T 2ij9_A 1 MKVVLSLGGSVLSNESEKIREFAKTIESVAQ-QNQVFVVVGGGKLAREYIKSARELGA-----------SETFCDYIGIA 68 (219)
T ss_dssp CEEEEEECSSTTTTCHHHHHHHHHHHHHHHH-HSEEEEEECCHHHHHHHHHHHHHTTC-----------CHHHHHHHHHH
T ss_pred CeEEEEeChhhhCChHHHHHHHHHHHHHHcC-CCEEEEEECcchHhcchHHHHHHcCC-----------CccchHHHHHH
Confidence 47999999999998 348999999999999 9999999999999999 5677775 34567776555
Q ss_pred HhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHHcCCCeE
Q 007903 175 AGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLV 254 (585)
Q Consensus 175 ~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL~~G~IP 254 (585)
.+.+|..|++.+- .. ++. + ..++.+.|+++|+.|.||
T Consensus 69 ~~~~~~~l~~~~~--------~~-~~~------------------~----------------~~~~~~~i~~ll~~g~ip 105 (219)
T 2ij9_A 69 ATRLNAMLLISAI--------PS-AAK------------------K----------------VPVDFMEAEELSKLYRVV 105 (219)
T ss_dssp HHHHHHHHHHHHC--------TT-BCS------------------S----------------CCSSHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHHH--------HH-hcC------------------C----------------CcCCHHHHHHHHHCCCEE
Confidence 7778887877541 11 110 0 125788899999999999
Q ss_pred EEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC---C----CCcccccccHHHHHHHHHhhchhhhHHH
Q 007903 255 ILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD---E----SGHLIRFLTLQEADSLIRQRVKQSEIAA 327 (585)
Q Consensus 255 Vi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~---~----~~~lI~~it~~e~~~li~~~~~~~~~~~ 327 (585)
|+++ |..++ |+|++|+++|.+|+||+|+|+|||||++ | ++++|++++.+|+++++...
T Consensus 106 Vi~~------g~~~~-~~D~~Aa~lA~~l~Ad~li~lTdVdGv~~~dP~~~~~a~~i~~i~~~e~~~~~~~~-------- 170 (219)
T 2ij9_A 106 VMGG------TFPGH-TTDATAALLAEFIKADVFINATNVDGVYSADPKSDTSAVKYDRLSPQQLVEIVSRS-------- 170 (219)
T ss_dssp EECC------CSSSS-CTHHHHHHHHHHTTCSEEEEEESSSSCBCSSCSSSSSCCBCSEECHHHHHHHTCC---------
T ss_pred EEeC------CCCCC-CchHHHHHHHHHcCCCeEEEeeCCCceecCCCCCCCCCeEeeeeCHHHHHHHHhcC--------
Confidence 9999 44566 9999999999999999999999999982 3 68999999999887774320
Q ss_pred HHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccCcHHHHHHH
Q 007903 328 NYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAA 407 (585)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~~kl~aa 407 (585)
++.+| || .+|..+|
T Consensus 171 --------------------------------------------g~~~g-~~---------------------~~~~~~a 184 (219)
T 2ij9_A 171 --------------------------------------------SAKAG-TN---------------------VVIDLLA 184 (219)
T ss_dssp ------------------------------------------------C-CC---------------------CCSCHHH
T ss_pred --------------------------------------------CCCCC-Cc---------------------cchHHHH
Confidence 01124 53 3444456
Q ss_pred HHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeec
Q 007903 408 AFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (585)
Q Consensus 408 ~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~ 444 (585)
..+++.++.++||+|| .++.| .++|++++.||+|.
T Consensus 185 ~~~~~~~~~~v~I~~g-~~~~l-~~~~~g~~~GT~i~ 219 (219)
T 2ij9_A 185 AKIIERSKIKTYVILG-TPENI-MKAVKGEAVGTVIA 219 (219)
T ss_dssp HHHHHHHTCCEEEEEC-CHHHH-HHHHTTCCCSEEEC
T ss_pred HHHHHHCCCeEEEEEC-CHhHH-HHHHcCCCCCeEeC
Confidence 5655544446999999 99985 78999999999984
|
| >1z9d_A Uridylate kinase, UK, UMP kinase; structural genomics, protein structure initiative, NYSGXRC, PYRH, putative uridylate kinase, PSI; 2.80A {Streptococcus pyogenes} SCOP: c.73.1.3 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.3e-28 Score=246.68 Aligned_cols=219 Identities=15% Similarity=0.121 Sum_probs=167.4
Q ss_pred CCeEEEEeCCccCCCC--------ChHHHHHHHHHHHHCCCeEEEEeCchHHHHHH-HHHcCCcccccCCccCCCHHHHH
Q 007903 99 GGTFVVIISGEIVSSP--------YLDPILKDIAFLHHLGIRFVLVPGTHVQIDKL-LSERGHEAKYLGRYRITDSESLA 169 (585)
Q Consensus 99 ~k~iVIKlGGs~l~~~--------~l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~-l~~~g~~~~~~~g~rvt~~~~l~ 169 (585)
.+++|||+||++++++ .++.++++|+.|++.|+++|||||||+++... ++++|+++++ .+
T Consensus 7 ~k~iViKlGGs~l~~~~~~~~~~~~~~~~a~~I~~l~~~G~~vVlVhGgG~~~~g~~~~~lg~~~~~-----------~~ 75 (252)
T 1z9d_A 7 YQRILIKLSGEALAGEKGVGIDIPTVQAIAKEIAEVHVSGVQIALVIGGGNLWRGEPAADAGMDRVQ-----------AD 75 (252)
T ss_dssp CSEEEEEECGGGGTCSSSSSCCHHHHHHHHHHHHHHHTTTCEEEEEECCTTTCCHHHHHHHTCCHHH-----------HH
T ss_pred CCEEEEEEchHHccCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEECCChHhccchHHHcCCCCCc-----------hH
Confidence 5899999999999963 27899999999999999999999999875544 6778876531 12
Q ss_pred HHHHHHhHHHHH-HHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHH
Q 007903 170 AAMEAAGGIRMM-IEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERL 248 (585)
Q Consensus 170 ~~~~~~G~i~~~-L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL 248 (585)
...+..+.+|.. +.+ .|.++|++ ++.+++.+...+. | ..++.+. ++||
T Consensus 76 ~~~~~~~~~~~~ll~~---------al~~~G~~----~~~~~~~~~~~~~----------~-------~~~~~~~-~~lL 124 (252)
T 1z9d_A 76 YTGMLGTVMNALVMAD---------SLQHYGVD----TRVQTAIPMQNVA----------E-------PYIRGRA-LRHL 124 (252)
T ss_dssp HHHHHHHHHHHHHHHH---------HHHTTTCC----EEEEESSCBTTTB----------E-------ECCHHHH-HHHH
T ss_pred HHHHHHHHHHHHHHHH---------HHHHcCCC----eEEEecccccccc----------C-------cchHHHH-HHHH
Confidence 223344456665 333 46788887 5666665432111 0 1246555 8999
Q ss_pred cCCCeEEEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEee-cccccC-------CCCcccccccHHHHHHHHHhhc
Q 007903 249 DGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICII-DGPILD-------ESGHLIRFLTLQEADSLIRQRV 320 (585)
Q Consensus 249 ~~G~IPVi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilT-DV~gl~-------~~~~lI~~it~~e~~~li~~~~ 320 (585)
+.|+|||+++. .| ..|+|+|++|+++|.+|+||+|+|+| ||||++ |++++|++++.+|+.+. +
T Consensus 125 ~~g~IpVi~~~----~g-~~~~~~D~~Aa~lA~~l~Ad~LiilT~DVdGvy~~dP~~~~~a~~i~~i~~~e~~~~---~- 195 (252)
T 1z9d_A 125 EKNRIVVFGAG----IG-SPYFSTDTTAALRAAEIEADAILMAKNGVDGVYNADPKKDANAVKFDELTHGEVIKR---G- 195 (252)
T ss_dssp HTTCEEEEEST----TS-CTTCCHHHHHHHHHHHTTCSEEEEEESSCCSCBSSCTTTCTTCCBCSEEEHHHHHTT---T-
T ss_pred hCCCEEEEeCC----cC-CCCCChHHHHHHHHHhcCCCEEEEecCCCCeeeCCCCCCCCCCeEeeEecHHHHHhc---c-
Confidence 99999999981 23 35899999999999999999999999 999983 35899999998775431 1
Q ss_pred hhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccCc
Q 007903 321 KQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGY 400 (585)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m 400 (585)
.| + |
T Consensus 196 ------------------------------------------------------~~-~---------------------m 199 (252)
T 1z9d_A 196 ------------------------------------------------------LK-I---------------------M 199 (252)
T ss_dssp ------------------------------------------------------CC-C---------------------S
T ss_pred ------------------------------------------------------cc-c---------------------c
Confidence 12 3 6
Q ss_pred HHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeeccccc
Q 007903 401 LSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLY 448 (585)
Q Consensus 401 ~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~~d~~ 448 (585)
|++||..|++.|++ ++|+|+..++.| .++|++++.||+|.++.|
T Consensus 200 --k~~aa~~a~~~gv~-v~I~~g~~~~~l-~~~l~g~~~GT~i~~~~~ 243 (252)
T 1z9d_A 200 --DATASTLSMDNDID-LVVFNMNEAGNI-QRVVFGEHIGTTVSNKVC 243 (252)
T ss_dssp --CHHHHHHHHHTTCE-EEEEETTSTTHH-HHHHTTCCCSEEEECC--
T ss_pred --CHHHHHHHHHcCCe-EEEEeCCCchHH-HHHHcCCCCceEEecCCC
Confidence 78899999999998 999999999985 899999999999998877
|
| >2brx_A Uridylate kinase; UMP kinase, amino acid kinase, phosphoryl group transfer, pyrimidine biosynthesis, transferase; 2.40A {Pyrococcus furiosus} SCOP: c.73.1.3 PDB: 2ji5_A* 2bmu_A* 2bri_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.8e-29 Score=252.28 Aligned_cols=211 Identities=14% Similarity=0.065 Sum_probs=160.9
Q ss_pred CCeEEEEeCCccCCCC----C-hHHHHHHHHHHHHCCCeEEEEeCchHHHHH---HHHHcCCcccccCCccCCCHHHHHH
Q 007903 99 GGTFVVIISGEIVSSP----Y-LDPILKDIAFLHHLGIRFVLVPGTHVQIDK---LLSERGHEAKYLGRYRITDSESLAA 170 (585)
Q Consensus 99 ~k~iVIKlGGs~l~~~----~-l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~---~l~~~g~~~~~~~g~rvt~~~~l~~ 170 (585)
.+++|||+||++++++ . ++.++++|+.|++ |+++|||||||++++. .++++++ +...++.
T Consensus 19 ~k~iViKlGGs~l~~~~~~~~~i~~~~~~i~~l~~-g~~vViV~GgG~~~~~~~~~~~~~gl-----------~~~~~~~ 86 (244)
T 2brx_A 19 HMRIVFDIGGSVLVPENPDIDFIKEIAYQLTKVSE-DHEVAVVVGGGKLARKYIEVAEKFNS-----------SETFKDF 86 (244)
T ss_dssp CCEEEEEECHHHHCSSSCCHHHHHHHHHHHHHHHH-HSEEEEEECCHHHHHHHHHHHHTTTC-----------CHHHHHH
T ss_pred ccEEEEEechhhcCCCCCCHHHHHHHHHHHHHHhC-CCeEEEEECccHHHhchHHHHHHcCC-----------CcccHHH
Confidence 4799999999999853 2 7999999999999 9999999999999988 3555555 3456666
Q ss_pred HHHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHHcC
Q 007903 171 AMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDG 250 (585)
Q Consensus 171 ~~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL~~ 250 (585)
..++.+.+|..|++. .|.++|++ + ..++.+.++++|+.
T Consensus 87 ~~~~~~~~~~~l~~~--------~l~~~g~~----~------------------------------~~~~~~~i~~lL~~ 124 (244)
T 2brx_A 87 IGIQITRANAMLLIA--------ALREKAYP----V------------------------------VVEDFWEAWKAVQL 124 (244)
T ss_dssp HHHHHHHHHHHHHHH--------HHGGGBCS----S------------------------------CBCSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHH--------HHHHcCCC----C------------------------------CcCCHHHHHHHHhC
Confidence 544566777777652 35666653 1 02367788999999
Q ss_pred CCeEEEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC-------CCCcccccccHHHHHHHHHhhchhh
Q 007903 251 GCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQS 323 (585)
Q Consensus 251 G~IPVi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~-------~~~~lI~~it~~e~~~li~~~~~~~ 323 (585)
|.|||+++ |..++ |+|++|+++|.+|+||+|+|+|||||++ |++++|++++.+|+++++....
T Consensus 125 g~IpVi~g------g~~~~-~~D~~Aa~lA~~l~Ad~liilTDVdGVy~~dP~~~p~a~~i~~i~~~e~~~~~~~~g--- 194 (244)
T 2brx_A 125 KKIPVMGG------THPGH-TTDAVAALLAEFLKADLLVVITNVDGVYTADPKKDPTAKKIKKMKPEELLEIVGKGI--- 194 (244)
T ss_dssp TCBCEECC------CSTTC-CHHHHHHHHHHHTTCSEEEEECSSSSCBSSCTTTCTTCCBCSEECHHHHHHHHHC-----
T ss_pred CCEEEEcC------CCCCC-CchHHHHHHHHHcCCCEEEEEeCCCccCCCCCCCCCCCeEeeEECHHHHHHHHhccC---
Confidence 99999998 34445 9999999999999999999999999982 3689999999999888764310
Q ss_pred hHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccCcHHH
Q 007903 324 EIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSE 403 (585)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~~k 403 (585)
+.+| | |.+|
T Consensus 195 -------------------------------------------------~~~g-~---------------------m~~~ 203 (244)
T 2brx_A 195 -------------------------------------------------EKAG-S---------------------SSVI 203 (244)
T ss_dssp -----------------------------------------------------------------------------CCS
T ss_pred -------------------------------------------------CCCC-C---------------------Ccch
Confidence 1124 5 3444
Q ss_pred HHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeecc
Q 007903 404 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (585)
Q Consensus 404 l~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~~ 445 (585)
..+|..+++.++.+++|+||+.++.| .++|++++.||+|.+
T Consensus 204 ~~~A~~~~~~~~~~v~I~ng~~~~~l-~~~l~g~~~GT~i~~ 244 (244)
T 2brx_A 204 DPLAAKIIARSGIKTIVIGKEDAKDL-FRVIKGDHNGTTIEP 244 (244)
T ss_dssp CHHHHHHHHHHTCCEEEECHHHHTCH-HHHHTTCSSSEEECC
T ss_pred HHHHHHHHHHCCCeEEEEeCCChhHH-HHHHcCCCCceEecC
Confidence 55666666655556999999999985 889999999999863
|
| >2va1_A Uridylate kinase; UMPK, transferase, pyrimidine biosynthesis, amino acid kinase family; 2.50A {Ureaplasma parvum} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.2e-28 Score=246.17 Aligned_cols=214 Identities=11% Similarity=0.080 Sum_probs=163.5
Q ss_pred CCeEEEEeCCccCCCC--------ChHHHHHHHHHHHHCCCeEEEEeCchHHHHHH-HHHcCCcccccCCccCCCHHHHH
Q 007903 99 GGTFVVIISGEIVSSP--------YLDPILKDIAFLHHLGIRFVLVPGTHVQIDKL-LSERGHEAKYLGRYRITDSESLA 169 (585)
Q Consensus 99 ~k~iVIKlGGs~l~~~--------~l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~-l~~~g~~~~~~~g~rvt~~~~l~ 169 (585)
.+++|||+||++++++ .++.++++|+.|+ .|+++|||||||+++... ++++++++.. .+
T Consensus 24 ~k~iVIKiGGs~l~~~~~~~~~~~~i~~~a~~i~~l~-~g~~vVlVhGgG~~~~~~~~~~~g~~~~~-----------~~ 91 (256)
T 2va1_A 24 KQRIVIKISGACLKQNDSSIIDFIKINDLAEQIEKIS-KKYIVSIVLGGGNIWRGSIAKELDMDRNL-----------AD 91 (256)
T ss_dssp CSEEEEEECGGGGCSSTTCSSCHHHHHHHHHHHHHHT-TTSEEEEEECCTTTCCHHHHHHTTCCHHH-----------HH
T ss_pred cCEEEEEechhhccCCCCCCCCHHHHHHHHHHHHHHh-CCCEEEEEECCcHHhccchHHHcCCCCCc-----------hh
Confidence 5899999999999964 1789999999998 899999999999997765 7788876531 12
Q ss_pred HHHHHHhHHHHHH-HHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHH
Q 007903 170 AAMEAAGGIRMMI-EAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERL 248 (585)
Q Consensus 170 ~~~~~~G~i~~~L-~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL 248 (585)
...++.+.+|..| ++ .|.++|++ ++++++.+.. ++.. ..++.+. ..||
T Consensus 92 ~~~~l~~~~n~~l~~~---------~l~~~Gi~----a~~~~~~t~~-------------~~~~----~~~~~~~-~~lL 140 (256)
T 2va1_A 92 NMGMMATIINGLALEN---------ALNHLNVN----TIVLSAIKCD-------------KLVH----ESSANNI-KKAI 140 (256)
T ss_dssp HHHHHHHHHHHHHHHH---------HHHTTTCC----EEEEESSCCT-------------TTCE----ECCHHHH-HHHH
T ss_pred HHHHHHHHHHHHHHHH---------HHHHcCCC----eEEEeeeecc-------------cccc----hhhHHHH-HHHH
Confidence 2233445666666 44 46788987 5566554321 1110 1345666 7899
Q ss_pred cCCCeEEEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeec-ccccC-------CCCcccccccHHHHHHHHHhhc
Q 007903 249 DGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIID-GPILD-------ESGHLIRFLTLQEADSLIRQRV 320 (585)
Q Consensus 249 ~~G~IPVi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTD-V~gl~-------~~~~lI~~it~~e~~~li~~~~ 320 (585)
+.|+|||+++ .+|. .++|+|++|+++|.+|+||+|+++|| |||++ |++++|++++.+|++++ +.
T Consensus 141 ~~g~IpVi~~----~~g~-~~~~~D~~Aa~lA~~l~Ad~LiilTD~VdGVy~~dP~~~p~a~~i~~is~~e~~~~---~~ 212 (256)
T 2va1_A 141 EKEQVMIFVA----GTGF-PYFTTDSCAAIRAAETESSIILMGKNGVDGVYDSDPKINPNAQFYEHITFNMALTQ---NL 212 (256)
T ss_dssp HTTCEEEEES----TTSS-SSCCHHHHHHHHHHHHTCSEEEEEESSCCSBCSCC--------CBSEEEHHHHHHH---TC
T ss_pred hCCcEEEEEC----CCCC-CCCChhHHHHHHHHhCCCCEEEEeecccCeEEcCCCCCCCCCEEccEEcHHHHHHh---cc
Confidence 9999999998 2333 35799999999999999999999999 99983 35899999999887665 11
Q ss_pred hhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccCc
Q 007903 321 KQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGY 400 (585)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m 400 (585)
| + |
T Consensus 213 -------------------------------------------------------~-~---------------------m 215 (256)
T 2va1_A 213 -------------------------------------------------------K-V---------------------M 215 (256)
T ss_dssp -------------------------------------------------------C-S---------------------S
T ss_pred -------------------------------------------------------C-C---------------------c
Confidence 2 4 7
Q ss_pred HHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeec
Q 007903 401 LSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (585)
Q Consensus 401 ~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~ 444 (585)
|++||..|++.|++ ++|+|+..++.| .++|++++.||+|.
T Consensus 216 --k~~aa~~a~~~gv~-v~I~~g~~~~~l-~~~l~g~~~GT~i~ 255 (256)
T 2va1_A 216 --DATALALCQENNIN-LLVFNIDKPNAI-VDVLEKKNKYTIVS 255 (256)
T ss_dssp --CHHHHHHHHHTTCE-EEEEESSSTTHH-HHHHTTCSCEEEEE
T ss_pred --cHHHHHHHHHCCCe-EEEEeCCCchHH-HHHHcCCCCeEEEe
Confidence 89999999999997 999999999985 69999999999985
|
| >1ybd_A Uridylate kinase; alpha/beta/alpha fold, hexamer, structural genomics, structure initiative, PSI; 2.60A {Neisseria meningitidis} SCOP: c.73.1.3 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-27 Score=239.29 Aligned_cols=217 Identities=15% Similarity=0.106 Sum_probs=165.8
Q ss_pred CCeEEEEeCCccCCCC--------ChHHHHHHHHHHHHCCCeEEEEeCchHHHHHH-HHHcCCcccccCCccCCCHHHHH
Q 007903 99 GGTFVVIISGEIVSSP--------YLDPILKDIAFLHHLGIRFVLVPGTHVQIDKL-LSERGHEAKYLGRYRITDSESLA 169 (585)
Q Consensus 99 ~k~iVIKlGGs~l~~~--------~l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~-l~~~g~~~~~~~g~rvt~~~~l~ 169 (585)
.+++|||+||++++++ .++.++++|+.|++.|+++|||||||+++... +++++++.+ +.+
T Consensus 7 ~~~iViK~GGs~l~~~~~~~~~~~~~~~~~~~i~~l~~~g~~vviV~GgG~~~~g~~~~~~~~~~~-----------~~~ 75 (239)
T 1ybd_A 7 YKRVLLKLSGESLMGSDPFGINHDTIVQTVGEIAEVVKMGVQVGIVVGGGNIFRGVSAQAGSMDRA-----------TAD 75 (239)
T ss_dssp CSEEEEEECGGGGGTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHHHTTSCHH-----------HHH
T ss_pred CCEEEEEEchHHhCCCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEECCcHHHhchhHHHcCCCCc-----------cHH
Confidence 5899999999999964 27899999999999999999999999987766 577777642 122
Q ss_pred HHHHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHHc
Q 007903 170 AAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLD 249 (585)
Q Consensus 170 ~~~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL~ 249 (585)
...+..+.+|..++.. .|.++|++ +..+++.+...+. . + .++.+.+ ++|+
T Consensus 76 ~~~~~~~~~~~~l~~~--------~l~~~G~~----~~~~~~~~~~~~~--------~-~--------~~~~~~~-~ll~ 125 (239)
T 1ybd_A 76 YMGMMATVMNALALKD--------AFETLGIK----ARVQSALSMQQIA--------E-T--------YARPKAI-QYLE 125 (239)
T ss_dssp HHHHHHHHHHHHHHHH--------HHHHTTCC----EEEEESSCBSSSC--------E-E--------CCHHHHH-HHHH
T ss_pred HHHHHHHHHHHHHHHH--------HHHHcCCC----eEEEeeecccccc--------c-c--------hhHHHHH-HHHh
Confidence 2223444566664332 46888987 5666665532111 0 1 2456777 8999
Q ss_pred CCCeEEEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC-------CCCcccccccHHHHHHHHHhhchh
Q 007903 250 GGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQ 322 (585)
Q Consensus 250 ~G~IPVi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~-------~~~~lI~~it~~e~~~li~~~~~~ 322 (585)
.|.|||+++. .| ..++|+|++|+++|.+|+||+|+|+|||||++ |++++|++++.+|+.++ +.
T Consensus 126 ~g~ipVv~g~----~g-~~~~~~D~~Aa~lA~~l~Ad~liilTdVdGvy~~dp~~~p~a~~i~~i~~~e~~~~---g~-- 195 (239)
T 1ybd_A 126 EGKVVIFAAG----TG-NPFFTTDTAAALRGAEMNCDVMLKATNVDGVYTADPKKDPSATRYETITFDEALLK---NL-- 195 (239)
T ss_dssp TTCEEEEEST----TS-STTCCHHHHHHHHHHHTTCSEEEEECSSSSCBSSCGGGCTTCCBCSEEEHHHHHHT---TC--
T ss_pred CCcEEEEECC----cc-CCCCCcHHHHHHHHHhcCCCEEEEeeCCCccCCCCCCCCCCCeEccccCHHHHHHh---cc--
Confidence 9999999842 22 23589999999999999999999999999983 45789999998876542 11
Q ss_pred hhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccCcHH
Q 007903 323 SEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLS 402 (585)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~~ 402 (585)
+ + |
T Consensus 196 -----------------------------------------------------~-~---------------------m-- 198 (239)
T 1ybd_A 196 -----------------------------------------------------K-V---------------------M-- 198 (239)
T ss_dssp -----------------------------------------------------C-S---------------------S--
T ss_pred -----------------------------------------------------c-c---------------------c--
Confidence 2 3 5
Q ss_pred HHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeecc
Q 007903 403 ELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (585)
Q Consensus 403 kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~~ 445 (585)
|++||..|++.|++ ++|+|+..++.| .++|++++.||+|.+
T Consensus 199 ~~~a~~~a~~~gv~-v~I~~~~~~~~l-~~~l~g~~~GT~i~~ 239 (239)
T 1ybd_A 199 DATAFALCRERKLN-IVVFGIAKEGSL-KRVITGEDEGTLVHC 239 (239)
T ss_dssp CHHHHHHHHHTTCC-EEEECTTSTTHH-HHHHHTCSCSEEEEC
T ss_pred CHHHHHHHHHcCCc-EEEEeCCChhHH-HHHHcCCCCCeEEcC
Confidence 67799999999998 999999999985 689999999999863
|
| >3ek6_A Uridylate kinase; UMPK unique GTP B site, allosteric regulation, ATP-binding, nucleotid binding, pyrimidine biosynthesis, transferase; 2.34A {Xanthomonas campestris PV} SCOP: c.73.1.0 PDB: 3ek5_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-27 Score=239.28 Aligned_cols=217 Identities=18% Similarity=0.173 Sum_probs=165.8
Q ss_pred cCCeEEEEeCCccCCCCC--------hHHHHHHHHHHHHCCCeEEEEeCchHH-HHHHHHHcCCcccccCCccCCCHHHH
Q 007903 98 RGGTFVVIISGEIVSSPY--------LDPILKDIAFLHHLGIRFVLVPGTHVQ-IDKLLSERGHEAKYLGRYRITDSESL 168 (585)
Q Consensus 98 r~k~iVIKlGGs~l~~~~--------l~~l~~~Ia~L~~~G~~vVlVhGgg~~-i~~~l~~~g~~~~~~~g~rvt~~~~l 168 (585)
+.++||||+||++|++++ ++.++++|+.+++.|+++|||||||+. .+..+.++|++.. ..+.|
T Consensus 8 ~~~riViKlGGs~l~~~~~~~~~~~~i~~la~~i~~l~~~G~~vviV~gGG~~~~~~~~~~~g~~~~--------~~d~~ 79 (243)
T 3ek6_A 8 SYRRILLKLSGEALMGDGDYGIDPKVINRLAHEVIEAQQAGAQVALVIGGGNIFRGAGLAASGMDRV--------TGDHM 79 (243)
T ss_dssp SCSEEEEEECGGGGTTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEECSTTTSCSTTTSCSSSCHH--------HHHHH
T ss_pred cCcEEEEEEchhhccCCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCCCCC--------CHHHH
Confidence 468999999999999742 789999999999999999999998864 2333444444321 12223
Q ss_pred HHHHHHHhHHHHH-HHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHH
Q 007903 169 AAAMEAAGGIRMM-IEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRER 247 (585)
Q Consensus 169 ~~~~~~~G~i~~~-L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~l 247 (585)
. .+.+.+|.. +.+ .|.++|++ ++.+++.+...+ ...++.+.+.++
T Consensus 80 g---~l~t~~N~~~l~~---------al~~~G~~----a~~~~~~~~~~v------------------~~~~~~~~~~~l 125 (243)
T 3ek6_A 80 G---MLATVINALAMQD---------ALEKLGAK----VRVMSAIKINDV------------------CEDFIRRRAIRH 125 (243)
T ss_dssp H---HHHHHHHHHHHHH---------HHHHTTCC----EEEEESSCBTTT------------------BEECCHHHHHHH
T ss_pred H---HHHHHHHHHHHHH---------HHHHcCCC----eEEechhhcCcc------------------cCcCCHHHHHHH
Confidence 2 245577776 434 46889987 677777653211 123467889999
Q ss_pred HcCCCeEEEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC-------CCCcccccccHHHHHHHHHhhc
Q 007903 248 LDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRV 320 (585)
Q Consensus 248 L~~G~IPVi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~-------~~~~lI~~it~~e~~~li~~~~ 320 (585)
|+.|+|||+++. .|. .++|+|++|+++|.+|+||+|+++|||||++ |++++|++++.+|+.+ .+.
T Consensus 126 L~~g~IpVv~~~----~g~-~~~~~D~~Aa~lA~~l~Ad~li~lTdVdGvy~~dp~~~p~a~~i~~i~~~e~~~---~g~ 197 (243)
T 3ek6_A 126 LEKGRIAIFAAG----TGN-PFFTTDSGAALRAIEIGADLLLKATKVDGVYDKDPKKHSDAVRYDSLTYDEVIM---QGL 197 (243)
T ss_dssp HHTTCEEEEEST----TSS-TTCCHHHHHHHHHHHHTCSEEEEECSSSSCBSSCGGGCTTCCBCSEECHHHHHH---HTC
T ss_pred HHCCcEEEEECC----CCC-CcCChHHHHHHHHHHcCCCEEEEEeCCCccCCCCCCCCCCceecccccHHHHHh---CCc
Confidence 999999999982 233 3589999999999999999999999999983 4688999999887533 111
Q ss_pred hhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccCc
Q 007903 321 KQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGY 400 (585)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m 400 (585)
+ + |
T Consensus 198 -------------------------------------------------------~-~---------------------~ 200 (243)
T 3ek6_A 198 -------------------------------------------------------E-V---------------------M 200 (243)
T ss_dssp -------------------------------------------------------C-S---------------------S
T ss_pred -------------------------------------------------------h-h---------------------H
Confidence 1 2 3
Q ss_pred HHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeecc
Q 007903 401 LSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (585)
Q Consensus 401 ~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~~ 445 (585)
|++|+..|++.|++ ++|+|++.++. |.++|++++.||+|.+
T Consensus 201 --~~~a~~~a~~~gv~-v~I~~g~~~~~-l~~~l~g~~~GT~i~~ 241 (243)
T 3ek6_A 201 --DTAAFALARDSDLP-LRIFGMSEPGV-LLRILHGAQIGTLVQG 241 (243)
T ss_dssp --CHHHHHHHHHTTCC-EEEECCCSTTH-HHHHHTTCCCSEEECC
T ss_pred --HHHHHHHHHHCCCe-EEEEcCCCccH-HHHHHCCCCCceEEee
Confidence 67899999999998 99999999998 5699999999999975
|
| >2a1f_A Uridylate kinase; PYRH, structural genomics, PSI, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.10A {Haemophilus influenzae} SCOP: c.73.1.3 PDB: 2bne_A* 2bnf_A* 2v4y_A* 2bnd_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-27 Score=238.96 Aligned_cols=218 Identities=17% Similarity=0.107 Sum_probs=166.0
Q ss_pred CCeEEEEeCCccCCCC--------ChHHHHHHHHHHHHCCCeEEEEeCchHHHHHH-HHHcCCcccccCCccCCCHHHHH
Q 007903 99 GGTFVVIISGEIVSSP--------YLDPILKDIAFLHHLGIRFVLVPGTHVQIDKL-LSERGHEAKYLGRYRITDSESLA 169 (585)
Q Consensus 99 ~k~iVIKlGGs~l~~~--------~l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~-l~~~g~~~~~~~g~rvt~~~~l~ 169 (585)
.+++|||+||++++++ .++.++++|+.|++.|+++|||||||+++... +++++++.+ +.+
T Consensus 8 ~k~iViKlGGs~l~~~~~~~~~~~~i~~~a~~I~~l~~~G~~vVlVhGgG~~~~~~~~~~~g~~~~-----------~~d 76 (247)
T 2a1f_A 8 YKRILLKLSGEALQGEDGLGIDPAILDRMAVEIKELVEMGVEVSVVLGGGNLFRGAKLAKAGMNRV-----------VGD 76 (247)
T ss_dssp CSEEEEEECGGGGCCTTSSSCCHHHHHHHHHHHHHHHTTTCEEEEEECCTTTCCCHHHHHTTCCHH-----------HHH
T ss_pred ccEEEEEEChhhhCCCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEECCChHhcchhHHHcCCCCC-----------cHH
Confidence 5899999999999953 27899999999999999999999999886554 577777642 223
Q ss_pred HHHHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHHc
Q 007903 170 AAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLD 249 (585)
Q Consensus 170 ~~~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL~ 249 (585)
...+..+.+|..++.. .|.++|++ ++.+++.+...+ +. ..++.+ ++++|+
T Consensus 77 ~~~~~~~~~~~~ll~~--------~l~~~G~~----~~~~~~~~~~~~-----------~~------~~~~~~-~~~ll~ 126 (247)
T 2a1f_A 77 HMGMLATVMNGLAMRD--------SLFRADVN----AKLMSAFQLNGI-----------CD------TYNWSE-AIKMLR 126 (247)
T ss_dssp HHHHHHHHHHHHHHHH--------HHHHTTCC----EEEEESSCCTTT-----------SE------ECCHHH-HHHHHH
T ss_pred HHHHHHHHHHHHHHHH--------HHHHcCCC----eEEecccccccc-----------cc------hhhHHH-HHHHHh
Confidence 3334455666663322 46888987 667766653211 00 124545 488999
Q ss_pred CCCeEEEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC-------CCCcccccccHHHHHHHHHhhchh
Q 007903 250 GGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQ 322 (585)
Q Consensus 250 ~G~IPVi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~-------~~~~lI~~it~~e~~~li~~~~~~ 322 (585)
.|.|||+++. .|. .++|+|++|+++|.+|+||+|+|+|||||++ |++++|++++.+|+.++ +.
T Consensus 127 ~g~ipVi~~~----~g~-~~~~~D~~Aa~lA~~l~Ad~liilTDVdGvy~~dP~~~p~a~~i~~i~~~e~~~~---g~-- 196 (247)
T 2a1f_A 127 EKRVVIFSAG----TGN-PFFTTDSTACLRGIEIEADVVLKATKVDGVYDCDPAKNPDAKLYKNLSYAEVIDK---EL-- 196 (247)
T ss_dssp TTCEEEEEST----TSC-SSCCHHHHHHHHHHHTTCSEEEEEESSSSCBCC-------CCBCSEECHHHHHHT---TC--
T ss_pred CCCEEEEeCC----cCC-CCCCcHHHHHHHHHhCCCCEEEEEeCCCcccCCCCCCCCCCeEcccCCHHHHHHc---Cc--
Confidence 9999999982 233 4699999999999999999999999999983 35899999998876543 11
Q ss_pred hhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccCcHH
Q 007903 323 SEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLS 402 (585)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~~ 402 (585)
+ + |
T Consensus 197 -----------------------------------------------------~-~---------------------m-- 199 (247)
T 2a1f_A 197 -----------------------------------------------------K-V---------------------M-- 199 (247)
T ss_dssp -----------------------------------------------------C-S---------------------S--
T ss_pred -----------------------------------------------------c-c---------------------c--
Confidence 2 3 5
Q ss_pred HHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeeccc
Q 007903 403 ELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446 (585)
Q Consensus 403 kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~~d 446 (585)
|++||..|++.|++ ++|+|+..++. |.++++++..||+|...
T Consensus 200 ~~~aa~~a~~~gv~-v~I~~~~~~~~-l~~~l~g~~~GT~~~~~ 241 (247)
T 2a1f_A 200 DLSAFTLARDHGMP-IRVFNMGKPGA-LRQVVTGTEEGTTICEG 241 (247)
T ss_dssp CHHHHHHHHHHTCC-EEEEETTSTTH-HHHHHTCSCSSEEECCC
T ss_pred CHHHHHHHHHcCCc-EEEEeCCCchH-HHHHHcCCCCceEEeec
Confidence 67799999999999 99999999998 57888999999999754
|
| >3nwy_A Uridylate kinase; allosterically activated form, AAK fold, UMP kinase, transfe; HET: GTP UDP; 2.54A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.95 E-value=7.5e-27 Score=238.33 Aligned_cols=216 Identities=16% Similarity=0.191 Sum_probs=158.3
Q ss_pred CCeEEEEeCCccCCCCC-------hHHHHHHHHHHHHCCCeEEEEeCchHHHHHH-HHHcCCcccccCCccCCCHHHHHH
Q 007903 99 GGTFVVIISGEIVSSPY-------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKL-LSERGHEAKYLGRYRITDSESLAA 170 (585)
Q Consensus 99 ~k~iVIKlGGs~l~~~~-------l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~-l~~~g~~~~~~~g~rvt~~~~l~~ 170 (585)
.++||||+||++|++++ +..++++|+.+++.|+++|||||||+.+... ...+|++ .++...+.
T Consensus 50 ~krIViKlGGs~L~~~~~~ld~~~i~~la~~I~~l~~~G~~vviV~GgG~i~~g~~~~~~gl~--------~~~~d~~g- 120 (281)
T 3nwy_A 50 YSRVLLKLGGEMFGGGQVGLDPDVVAQVARQIADVVRGGVQIAVVIGGGNFFRGAQLQQLGME--------RTRSDYMG- 120 (281)
T ss_dssp CSEEEEEECGGGGGTTSSSCCHHHHHHHHHHHHHHHHTTCEEEEEECCTTC---CCTTTTTCC--------HHHHHHHH-
T ss_pred CcEEEEEEchhhccCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEECChhHhhhHHHHhcCCC--------ccchhHHH-
Confidence 58999999999999642 7899999999999999999999987654322 1112222 11222222
Q ss_pred HHHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHHcC
Q 007903 171 AMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDG 250 (585)
Q Consensus 171 ~~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL~~ 250 (585)
.+...+|..+.+. .|.++|++ ++.+++.+...+. + ..++.+.+ ++|++
T Consensus 121 --~lat~~n~~~l~~--------~L~~~Gi~----a~~~~~~~~~~~~-~----------------~~~~~~~l-~lL~~ 168 (281)
T 3nwy_A 121 --MLGTVMNSLALQD--------FLEKEGIV----TRVQTAITMGQVA-E----------------PYLPLRAV-RHLEK 168 (281)
T ss_dssp --HHHHHHHHHHHHH--------HHHHTTCC----EEEEESSCCGGGS-E----------------ECCHHHHH-HHHHT
T ss_pred --HHHHHHHHHHHHH--------HHHHcCCC----EEEEecccccccc-c----------------ccchHHHH-HHHHc
Confidence 2333455433322 57899987 5566665543332 1 23466777 79999
Q ss_pred CCeEEEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC-------CCCcccccccHHHHHHHHHhhchhh
Q 007903 251 GCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQS 323 (585)
Q Consensus 251 G~IPVi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~-------~~~~lI~~it~~e~~~li~~~~~~~ 323 (585)
|.|||+++. +|. .++|+|++|+++|.+|+||+||++|||||++ |++++|++++.+|+ +..
T Consensus 169 g~IpVv~g~----~g~-~~~~~D~~Aa~lA~~l~Ad~LiilTDVdGVy~~dP~~~p~A~~i~~is~~e~---~~~----- 235 (281)
T 3nwy_A 169 GRVVIFGAG----MGL-PYFSTDTTAAQRALEIGADVVLMAKAVDGVFAEDPRVNPEAELLTAVSHREV---LDR----- 235 (281)
T ss_dssp TCEEEEEST----TSS-TTCCHHHHHHHHHHHTTCSEEEEEESSSSCBCC-----CCCCBCSEECHHHH---HTT-----
T ss_pred CCeEEEECC----CCC-CCCCHHHHHHHHHHHcCCCEEEEeeccCccccCCCCcCCCCeEcccccHHHH---HHc-----
Confidence 999999982 233 3589999999999999999999999999983 35789999998764 111
Q ss_pred hHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccCcHHH
Q 007903 324 EIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSE 403 (585)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~~k 403 (585)
| + |..|
T Consensus 236 ----------------------------------------------------g-~---------------------~v~k 241 (281)
T 3nwy_A 236 ----------------------------------------------------G-L---------------------RVAD 241 (281)
T ss_dssp ----------------------------------------------------T-C---------------------CSSC
T ss_pred ----------------------------------------------------C-C---------------------CcHH
Confidence 2 2 3457
Q ss_pred HHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeec
Q 007903 404 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (585)
Q Consensus 404 l~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~ 444 (585)
++||..|++.|++ ++|+|++.++. |.++|++++.||+|.
T Consensus 242 ~~Aa~~a~~~Gi~-v~I~~g~~p~~-l~~~l~Ge~~GT~i~ 280 (281)
T 3nwy_A 242 ATAFSLCMDNGMP-ILVFNLLTDGN-IARAVRGEKIGTLVT 280 (281)
T ss_dssp HHHHHHHHTTTCC-EEEEETTSTTH-HHHHHHTCCCSEEEC
T ss_pred HHHHHHHHHCCCe-EEEecCCCchH-HHHHHcCCCCceEEe
Confidence 8999999999997 99999999998 569999999999985
|
| >3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-26 Score=249.31 Aligned_cols=192 Identities=21% Similarity=0.221 Sum_probs=134.4
Q ss_pred CCeEEEEeCCccCCCCC-hHHHHHHHHHHHHCCCeEEEEeC-chHHHHHHHHHcCCcccccCCccCCCHHHHHHHHHHHh
Q 007903 99 GGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPG-THVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAG 176 (585)
Q Consensus 99 ~k~iVIKlGGs~l~~~~-l~~l~~~Ia~L~~~G~~vVlVhG-gg~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~~~~~G 176 (585)
++++|+|+||+++.+++ ++.++++|+.+++.|+++||||| +|++++.+++..+.... + .++..++.+. +.|
T Consensus 1 m~~iViK~GGssl~~~~~i~~v~~~i~~l~~~g~~~vvV~sa~g~~~~~ll~~~~~~~~-----~-~~~~~~d~~~-a~G 73 (421)
T 3ab4_A 1 MALVVQKYGGSSLESAERIRNVAERIVATKKAGNDVVVVCSAMGDTTDELLELAAAVNP-----V-PPAREMDMLL-TAG 73 (421)
T ss_dssp -CEEEEEECSGGGSSHHHHHHHHHHHHHHHHTTCEEEEEECCSTTHHHHHHHHHHHHCS-----S-CCHHHHHHHH-HHH
T ss_pred CCeEEEEEChhHhCCHHHHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhhhhcc-----C-CCHHHHHHHH-HHH
Confidence 47899999999999854 89999999999999999999997 78899988877653221 2 2567777765 457
Q ss_pred H-HHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHHcCCCeEE
Q 007903 177 G-IRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVI 255 (585)
Q Consensus 177 ~-i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL~~G~IPV 255 (585)
+ ++..+... .|+++|++ ++.+++.+..++++++ |+ .|++..++.+.|+++|+.|.|||
T Consensus 74 e~~~~~ll~~--------~L~~~G~~----a~~l~~~~~~~~t~~~--------~~-~~~v~~~~~~~i~~~l~~g~ipV 132 (421)
T 3ab4_A 74 ERISNALVAM--------AIESLGAE----AQSFTGSQAGVLTTER--------HG-NARIVDVTPGRVREALDEGKICI 132 (421)
T ss_dssp HHHHHHHHHH--------HHHHTTCC----EEECCCC--------------------------CCHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHH--------HHHHCCCC----eEEEehhhceEEeccC--------CC-CeeechhhHHHHHHHHhCCCEEE
Confidence 6 66654443 47889987 7888887766666543 33 47888899999999999999999
Q ss_pred EcCC-ccCCC-Cceeee---ChHHHHHHHHHHcCCCEEEEeeccccc---C----CCCcccccccHHHHHHHHHh
Q 007903 256 LSNL-GYSSS-GEVLNC---NTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTLQEADSLIRQ 318 (585)
Q Consensus 256 i~~v-~~~~~-G~~~ni---d~D~lAa~lA~~L~AdkLIilTDV~gl---~----~~~~lI~~it~~e~~~li~~ 318 (585)
++|+ +++++ |++.++ ++|++|+.+|.+|+||+|+++|||||+ | +++++|++++.+|+.+|...
T Consensus 133 v~g~~g~~~~~g~~~tlgrg~sD~~Aa~lA~~l~Ad~l~i~TDVdGv~~~dPr~~~~a~~i~~is~~e~~el~~~ 207 (421)
T 3ab4_A 133 VAGFQGVNKETRDVTTLGRGGSDTTAVALAAALNADVCEIYSDVDGVYTADPRIVPNAQKLEKLSFEEMLELAAV 207 (421)
T ss_dssp C------------------CCHHHHHHHHHHHHTCSEEEEEESCCSCBSSCTTTSTTCCBCSEECHHHHHHHHHT
T ss_pred EeCCcCcCCCCCceEEeCCCCHHHHHHHHHHHCCCCEEEEEECCCccCcCCCCCCCCCeEccccCHHHHHHHHhc
Confidence 9997 88888 998888 999999999999999999999999998 3 36899999999999998643
|
| >2jjx_A Uridylate kinase, UMP kinase; structural genomics, pyrimidine biosynthesis, ATP-binding, nucleotide-binding, OPPF, PYRH, cytoplasm; HET: ATP; 2.82A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.94 E-value=4e-26 Score=230.72 Aligned_cols=219 Identities=17% Similarity=0.186 Sum_probs=161.4
Q ss_pred cCCeEEEEeCCccCCCC--------ChHHHHHHHHHHHHCCCeEEEEeCchHHHHHH-HHHcCCcccccCCccCCCHHHH
Q 007903 98 RGGTFVVIISGEIVSSP--------YLDPILKDIAFLHHLGIRFVLVPGTHVQIDKL-LSERGHEAKYLGRYRITDSESL 168 (585)
Q Consensus 98 r~k~iVIKlGGs~l~~~--------~l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~-l~~~g~~~~~~~g~rvt~~~~l 168 (585)
+++++|||+||++++++ .++.++++|+.|++.|+++|||||||+++... +++++++.. +.+.+
T Consensus 11 ~~~~iViKiGGs~l~~~~~~~~~~~~i~~~a~~I~~l~~~G~~vViV~GgG~~~~~~~~~~~g~~~~--------~~~~~ 82 (255)
T 2jjx_A 11 PYKRVLIKLSGGALADQTGNSFNSKRLEHIANEILSIVDLGIEVSIVIGGGNIFRGHLAEEWGIDRV--------EADNI 82 (255)
T ss_dssp BCSEEEEEECGGGTSCSSSCSCCHHHHHHHHHHHHHHHTTTCEEEEEECCTTTCCHHHHHHTTCCHH--------HHHHH
T ss_pred cCCEEEEEECHHHhCCCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEECchHHHhhhHHHHcCCCCC--------ChHHH
Confidence 46899999999999974 27899999999999999999999999987444 667777532 22233
Q ss_pred HHHHHHHhHHHHHHHHhhCCCCCchhHHh-cCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHH
Q 007903 169 AAAMEAAGGIRMMIEAKLSPGPPICNIRR-HGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRER 247 (585)
Q Consensus 169 ~~~~~~~G~i~~~L~~~L~~~~~~~~l~~-~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~l 247 (585)
+ +++..+|..++.. .|.+ +|++ +.++++.+...++ + .++...+.++
T Consensus 83 ~---~~~~~~~~~ll~~--------~l~~~~Gi~----a~~l~~~~~~~v~----------------~--~~~~~~~~~l 129 (255)
T 2jjx_A 83 G---TLGTIINSLMLRG--------VLTSKTNKE----VRVMTSIPFNAVA----------------E--PYIRLRAVHH 129 (255)
T ss_dssp H---HHHHHHHHHHHHH--------HHHHHCSSC----EEEEESSCCCSSS----------------E--ECCHHHHHHH
T ss_pred h---HHHHHHHHHHHHH--------HHHhhcCCc----eEEecHHHcCccc----------------C--cccHHHHHHH
Confidence 2 2344566663332 4688 9987 5677776643221 1 2344444499
Q ss_pred HcCCCeEEEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEee-cccccC-------CCCcccccccHHHHHHHHHhh
Q 007903 248 LDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICII-DGPILD-------ESGHLIRFLTLQEADSLIRQR 319 (585)
Q Consensus 248 L~~G~IPVi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilT-DV~gl~-------~~~~lI~~it~~e~~~li~~~ 319 (585)
|+.|.|||++| + +|+ .++++|++|+++|.+|+||+|+++| ||||++ |++++|++|+.+|+.++ +
T Consensus 130 L~~g~IpVi~g-g---~g~-~~vttD~~Aa~lA~~l~Ad~liilT~DVdGVy~~dP~~~p~a~~i~~is~~e~~~~---G 201 (255)
T 2jjx_A 130 LDNGYIVIFGG-G---NGQ-PFVTTDYPSVQRAIEMNSDAILVAKQGVDGVFTSDPKHNKSAKMYRKLNYNDVVRQ---N 201 (255)
T ss_dssp HHTTCEEEEES-T---TSC-SSCCSHHHHHHHHHHHTCSEEEEEESSCCSCBSSCTTTCSSCCBCSEEEHHHHHHT---T
T ss_pred HhCCcEEEEeC-C---CCC-CccchHHHHHHHHHhcCCCEEEEEeCCcCeeECCCCCCCCCCeEeeEecHHHHHHc---C
Confidence 99999999998 2 343 3578999999999999999999999 999983 35899999997665432 1
Q ss_pred chhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccC
Q 007903 320 VKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNG 399 (585)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~ 399 (585)
+| +
T Consensus 202 -------------------------------------------------------~~-~--------------------- 204 (255)
T 2jjx_A 202 -------------------------------------------------------IQ-V--------------------- 204 (255)
T ss_dssp -------------------------------------------------------CC-S---------------------
T ss_pred -------------------------------------------------------Cc-c---------------------
Confidence 13 4
Q ss_pred cHHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeeccc
Q 007903 400 YLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446 (585)
Q Consensus 400 m~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~~d 446 (585)
|.+ .|+..+.+.|++ ++|+|+..++.| .+++++++.||+|.++
T Consensus 205 m~~--~a~~~a~~~gi~-v~I~~~~~~~~l-~~~l~g~~~GT~I~~~ 247 (255)
T 2jjx_A 205 MDQ--AALLLARDYNLP-AHVFNFDEPGVM-RRICLGEHVGTLINDD 247 (255)
T ss_dssp SCH--HHHHHHHHHTCC-EEEEETTSTTHH-HHHHBTCCCSEEEESS
T ss_pred CHH--HHHHHHHHcCCe-EEEEeCCCchHH-HHHhcCCCCceEEecC
Confidence 443 244444558998 999999999984 6677888999999875
|
| >3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.1e-22 Score=225.94 Aligned_cols=190 Identities=17% Similarity=0.177 Sum_probs=141.5
Q ss_pred CCeEEEEeCCccCCCCC-hHHHHHHHHHHHHCCCeEEEEeCc-hHHHHHHHHHcCCcccccCCccCCCHHHHHHHHHHHh
Q 007903 99 GGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGT-HVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAG 176 (585)
Q Consensus 99 ~k~iVIKlGGs~l~~~~-l~~l~~~Ia~L~~~G~~vVlVhGg-g~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~~~~~G 176 (585)
++++|+|+||+++.+++ ++.++++|+.+++.|+++|||||| |...+.+++... .+.. |+ ++..++.+ .+.|
T Consensus 1 m~~iViK~GGssl~~~~~i~~va~~i~~~~~~g~~vvvV~sa~G~~t~~ll~~~~---~~~~--~~-~~~~~d~l-~s~G 73 (600)
T 3l76_A 1 MALIVQKFGGTSVGTVERIQAVAQRIKRTVQGGNSLVVVVSAMGKSTDVLVDLAQ---QISP--NP-CRREMDML-LSTG 73 (600)
T ss_dssp -CEEEEEECSGGGSSHHHHHHHHHHHHHHHHTTCEEEEEECCSSTHHHHHHHHHH---HHCS--SC-CHHHHHHH-HHHH
T ss_pred CceEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCcEEEEECCCcHHHHHHHHHHH---hhcc--CC-CHHHHHHH-HHHh
Confidence 46899999999999876 899999999999999999999999 888777665321 1111 22 45566643 3556
Q ss_pred H-HHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHHcCCCeEE
Q 007903 177 G-IRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVI 255 (585)
Q Consensus 177 ~-i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL~~G~IPV 255 (585)
+ ++..+++. .|+++|++ ++++++.+..+++... ++ .+++..++++.|+++|+.|.|||
T Consensus 74 e~~s~~l~~~--------~l~~~G~~----a~~l~~~~~~l~~~~~--------~~-~~~~~~~~~~~i~~ll~~g~IpV 132 (600)
T 3l76_A 74 EQVSIALLSL--------ALQEIDQP----AISLTGAQVGIVTEAE--------HS-RARILEIRPDRLEHHLREGKVVV 132 (600)
T ss_dssp HHHHHHHHHH--------HHHHTTCC----EEEEEGGGTEEEEC----------------CCEEEECCHHHHHTTTCEEE
T ss_pred HHHHHHHHHH--------HHHhCCCC----eEEechhHcceEEecC--------CC-CceeccccHHHHHHHHhCCCEEE
Confidence 6 66666654 47899998 7899988876665432 11 34556677789999999999999
Q ss_pred EcC-CccCCCC--ceeee---ChHHHHHHHHHHcCCCEEEEeeccccc---C----CCCcccccccHHHHHHHH
Q 007903 256 LSN-LGYSSSG--EVLNC---NTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTLQEADSLI 316 (585)
Q Consensus 256 i~~-v~~~~~G--~~~ni---d~D~lAa~lA~~L~AdkLIilTDV~gl---~----~~~~lI~~it~~e~~~li 316 (585)
+++ .+.+++| .+.++ ++|++|+.+|.+|+||+|+++|||||+ | +++++|++++.+|+.+|.
T Consensus 133 v~Gf~g~~~~g~~~~~tlgrGgsD~~Aa~lA~~l~Ad~l~i~TDVdGv~~~dPr~~~~a~~i~~is~~e~~ela 206 (600)
T 3l76_A 133 VAGFQGISSVEHLEITTLGRGGSDTSAVALAAALKADFCEIYTDVPGILTTDPRLVPEAQLMAEITCDEMLELA 206 (600)
T ss_dssp EECEEEC----CEEEECCCTTHHHHHHHHHHHHHTCSEEEEEESSSSCBSSCTTTCTTCCBCSEEEHHHHHHTG
T ss_pred EECCeecCCCCCEEEecCCCCChHHHHHHHHHHcCCCEEEEEECCCcCCCCCCCCCCCCeEeeEEcHHHHHHHH
Confidence 987 5788888 44333 489999999999999999999999998 3 368999999999988774
|
| >2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 | Back alignment and structure |
|---|
Probab=99.74 E-value=5.9e-17 Score=178.10 Aligned_cols=196 Identities=17% Similarity=0.160 Sum_probs=132.4
Q ss_pred cCCeEEEEeCCccCCCCC-hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHc-CC------c-cccc-----------
Q 007903 98 RGGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSER-GH------E-AKYL----------- 157 (585)
Q Consensus 98 r~k~iVIKlGGs~l~~~~-l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~-g~------~-~~~~----------- 157 (585)
..+++|.|+||+.+.+.+ ++.+++-|... .+.++|+|.++..-+...|-++ .. . ..+.
T Consensus 25 ~~~~~V~KFGGTSva~~e~i~~va~iI~~~--~~~~~vVVVSA~g~~Td~Ll~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 102 (510)
T 2cdq_A 25 KGITCVMKFGGSSVASAERMKEVADLILTF--PEESPVIVLSAMGKTTNNLLLAGEKAVSCGVSNASEIEELSIIKELHI 102 (510)
T ss_dssp CCCCEEEEECTGGGSSHHHHHHHHHHHHHC--TTCCEEEEECCSTTHHHHHHHHHHHHTTTCTTTGGGCHHHHHHHHHHH
T ss_pred CCCeEEEEECCcccCCHHHHHHHHHHHHhc--cCCCEEEEEcCCCCCchHHHHHHHHHhhccccchhHHHHHHHHHHHHH
Confidence 567899999999999865 66777666432 3578888888743343333221 10 0 0000
Q ss_pred ------------------------CCc---cCCCHHHHHHHHHHHhH-HHHHHHHhhCCCCCchhHHhcCCCCcceeEEe
Q 007903 158 ------------------------GRY---RITDSESLAAAMEAAGG-IRMMIEAKLSPGPPICNIRRHGDSSRWHEVGV 209 (585)
Q Consensus 158 ------------------------~g~---rvt~~~~l~~~~~~~G~-i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l 209 (585)
.+. .-.++..++.+ .+.|+ ++..++.. .|+++|++ ++++
T Consensus 103 ~i~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~r~~d~l-~s~GE~~s~~ll~~--------~L~~~Gi~----A~~l 169 (510)
T 2cdq_A 103 RTVKELNIDPSVILTYLEELEQLLKGIAMMKELTLRTRDYL-VSFGECLSTRIFAA--------YLNTIGVK----ARQY 169 (510)
T ss_dssp HHHHHHTCCSHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHH-HHHHHHHHHHHHHH--------HHHHTTCC----EEEE
T ss_pred HHHHHhccCHHHHHHHHHHHHHHHhhhhccccCCHHHHHHH-HHHHHHHHHHHHHH--------HHHHCCCC----EEEE
Confidence 000 11123334433 34455 44444443 57899998 8999
Q ss_pred eecCcceeeeeeccccccccCcceeeEEEe----cHHHHHH-HHcCCCeEEEcC-CccCC-CCceeeeC---hHHHHHHH
Q 007903 210 SVASGNFLAAKRKGVVDGVDYGATGEVKKV----DVTRMRE-RLDGGCLVILSN-LGYSS-SGEVLNCN---TYEVATAC 279 (585)
Q Consensus 210 ~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v----~~~~I~~-lL~~G~IPVi~~-v~~~~-~G~~~nid---~D~lAa~l 279 (585)
++.+.++++.. +|+. +++..+ ..+.|.+ |++.|.|||+++ ++.++ +|.+.+++ +|.+|+.+
T Consensus 170 ~~~~~~l~t~~--------~~~~-~~i~~~~~~~~~~~l~~~Ll~~g~IpVv~Gf~g~~~~~g~ittlgrGgsD~tAa~l 240 (510)
T 2cdq_A 170 DAFEIGFITTD--------DFTN-GDILEATYPAVAKRLYDDWMHDPAVPIVTGFLGKGWKTGAVTTLGRGGSDLTATTI 240 (510)
T ss_dssp CGGGTTCEECS--------CSTT-CCBCTTHHHHHHHHHHHHHHHSCCEEEEESSEEEETTTCCEEECCTTHHHHHHHHH
T ss_pred EhhHeeEEEec--------CCCc-cchhhHHHHHHHHHHHHHHHhCCcEEEEeCccccCCCCCceEEeCCCChHHHHHHH
Confidence 99987777654 2332 222222 2355554 789999999998 68888 89999887 99999999
Q ss_pred HHHcCCCEEEEeeccccc---C----CCCcccccccHHHHHHHHH
Q 007903 280 ALAIEADKLICIIDGPIL---D----ESGHLIRFLTLQEADSLIR 317 (585)
Q Consensus 280 A~~L~AdkLIilTDV~gl---~----~~~~lI~~it~~e~~~li~ 317 (585)
|.+|+||.|+++|||||+ | +++++|++++.+|+.++..
T Consensus 241 A~~l~Ad~l~i~TDVdGVytaDPr~v~~A~~I~~Is~~E~~ela~ 285 (510)
T 2cdq_A 241 GKALGLKEIQVWKDVDGVLTCDPTIYKRATPVPYLTFDEAAELAY 285 (510)
T ss_dssp HHHHTCSEEEEEESSSSSBSSCTTTCTTCCBCCEEEHHHHHHHHH
T ss_pred HHHcCCCEEEEEeCCCCcCCCCCCCCCCCEEecEeCHHHHHHHHh
Confidence 999999999999999998 3 3689999999999888754
|
| >2j0w_A Lysine-sensitive aspartokinase 3; feedback inhibition, allosteric regulation, ACT domain, transferase, amino acid biosynthesis; HET: ADP; 2.5A {Escherichia coli} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 PDB: 2j0x_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=3.9e-17 Score=177.23 Aligned_cols=192 Identities=18% Similarity=0.176 Sum_probs=128.5
Q ss_pred CCeEEEEeCCccCCCCC-hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccc-----------------cCCc
Q 007903 99 GGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKY-----------------LGRY 160 (585)
Q Consensus 99 ~k~iVIKlGGs~l~~~~-l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~-----------------~~g~ 160 (585)
++++|.|+||+.+.+.+ ++.+++-|. +...++|+|.++...+...|..+...... .+.+
T Consensus 2 m~~~V~KFGGTSv~~~e~i~~va~ii~---~~~~~~vVVvSA~g~~Td~L~~~~~~~~~~~~~~~i~~i~~~~~~i~~~l 78 (449)
T 2j0w_A 2 SEIVVSKFGGTSVADFDAMNRSADIVL---SDANVRLVVLSASAGITNLLVALAEGLEPGERFEKLDAIRNIQFAILERL 78 (449)
T ss_dssp -CCEEEEECSGGGSSHHHHHHHHHHHT---SCTTEEEEEECCCTTHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHTTS
T ss_pred CccEEEEECCccCCCHHHHHHHHHHHH---hcCCCEEEEeCCCCchHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHh
Confidence 56899999999999854 566665553 23458899998855565555444322000 0000
Q ss_pred c-------------------------CCCHHHHHHHHHHHhHH-HHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCc
Q 007903 161 R-------------------------ITDSESLAAAMEAAGGI-RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASG 214 (585)
Q Consensus 161 r-------------------------vt~~~~l~~~~~~~G~i-~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg 214 (585)
. -..+..++.+ .+.|+. +..+... .|+++|++ ++++++.+.
T Consensus 79 ~~~~~~~~~i~~~~~~l~~l~~~~~~~~~~~~~d~l-~s~Ge~~s~~l~~~--------~L~~~Gi~----a~~l~~~~~ 145 (449)
T 2j0w_A 79 RYPNVIREEIERLLENITVLAEAAALATSPALTDEL-VSHGELMSTLLFVE--------ILRERDVQ----AQWFDVRKV 145 (449)
T ss_dssp SSTHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHH-HHHHHHHHHHHHHH--------HHHTTSCC----EEECCGGGT
T ss_pred cccHHHHHHHHHHHHHHHHHhhhhccCcCHHHHHHH-HHHHHHHHHHHHHH--------HHHHCCCc----EEEEchHHh
Confidence 0 0123334433 455664 3333332 57899998 789988886
Q ss_pred ceeeeeeccccccccCcceeeEEEec-----HHHHHHHHcCCCeEEEcC-CccCCCCceeeeC---hHHHHHHHHHHcCC
Q 007903 215 NFLAAKRKGVVDGVDYGATGEVKKVD-----VTRMRERLDGGCLVILSN-LGYSSSGEVLNCN---TYEVATACALAIEA 285 (585)
Q Consensus 215 ~~~~a~~~g~~~g~d~g~~G~v~~v~-----~~~I~~lL~~G~IPVi~~-v~~~~~G~~~nid---~D~lAa~lA~~L~A 285 (585)
+++.. +|+. +++...+ .+.++.|++.+ |||+++ ++.+++|++.+++ +|++|+.+|.+|+|
T Consensus 146 -l~t~~--------~~~~-~~~~~~~~~~~~~~~l~~l~~~~-IpVv~Gf~g~~~~g~~ttl~rGgsD~~Aa~lA~~l~A 214 (449)
T 2j0w_A 146 -MRTND--------RFGR-AEPDIAALAELAALQLLPRLNEG-LVITQGFIGSENKGRTTTLGRGGSDYTAALLAEALHA 214 (449)
T ss_dssp -CBBCS--------CTTS-CCBCHHHHHHHHHHHTHHHHHHS-EEEEESSEEECTTSCEEECCTTHHHHHHHHHHHHTTC
T ss_pred -eeecC--------CCCC-ccccHhHhHHHHHHHHHHHhcCC-EEEEeCCeeeCCCCCEEEeCCCChHHHHHHHHHHCCC
Confidence 55432 3332 2322222 24666777655 999984 7889999999887 99999999999999
Q ss_pred CEEEEeeccccc---C----CCCcccccccHHHHHHHHH
Q 007903 286 DKLICIIDGPIL---D----ESGHLIRFLTLQEADSLIR 317 (585)
Q Consensus 286 dkLIilTDV~gl---~----~~~~lI~~it~~e~~~li~ 317 (585)
|+|+++|||||+ | |++++|++++.+|+.++..
T Consensus 215 d~l~i~TDVdGv~~~DPr~~~~a~~i~~is~~e~~ela~ 253 (449)
T 2j0w_A 215 SRVDIWTDVPGIYTTDPRVVSAAKRIDEIAFAEAAEMAT 253 (449)
T ss_dssp SEEEEEESSSSEESSCTTTCTTCCEESEEEHHHHHHHHH
T ss_pred CEEEEccccCCcCcCCCCCCCCCEEccCccHHHHHHHHh
Confidence 999999999998 3 3689999999999888853
|
| >3e0k_A Amino-acid acetyltransferase; N-acetylglutamate synthase, structu genomics, PSI-2, protein structure initiative; HET: MSE; 2.52A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.61 E-value=2.5e-15 Score=136.00 Aligned_cols=125 Identities=30% Similarity=0.507 Sum_probs=105.1
Q ss_pred cccccccccccCHHHHHHHHHHHHHccccccCCHHHHHhccCeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCCc
Q 007903 447 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECR 526 (585)
Q Consensus 447 ~~~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyR 526 (585)
.+.+||+++++|++.+.+++.......+..+|+.+.+...+..++|++.+|++||++.+.+..+.+.++|..++|+|+||
T Consensus 2 ~~~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~i~~~~V~p~~r 81 (150)
T 3e0k_A 2 NAEQVRQAGIDDIGGILELIHPLEEQGILVRRSREQLEQEIGKFTIIEKDGLIIGCAALYPYSEERKAEMACVAIHPDYR 81 (150)
T ss_dssp -CEEEEECCGGGHHHHHHHHHHHHHTTCC-CCCHHHHHHHGGGEEEEEETTEEEEEEEEEEEGGGTEEEEEEEEECGGGC
T ss_pred chheeecCCHhhHHHHHHHHHHHhhcccccccCHHHHHHHHHheEEEEECCEEEEEEEEEEcCCCCeEEEEEEEECHHHh
Confidence 35689999999999999999888888888889999998888888999999999999999865556789999999999999
Q ss_pred CCcHHHHHHHHHHhhhHHHHHHcCCcccCccceecccc-cccccCeeecCcc
Q 007903 527 GQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTH-SYYRLKFNCSSKS 577 (585)
Q Consensus 527 GkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~-~YYrlGF~~~~~~ 577 (585)
|+|+|++||++++ +++++.|+...... +..+. .|.++||+..+..
T Consensus 82 g~Gig~~Ll~~~~----~~a~~~g~~~i~l~--n~~a~~~y~k~GF~~~~~~ 127 (150)
T 3e0k_A 82 DGNRGLLLLNYMK----HRSKSENINQIFVL--TTHSLHWFREQGFYEVGVD 127 (150)
T ss_dssp SSSHHHHHHHHHH----HHHHTTTCCEEECC--CSSCHHHHHHHTCCCCCGG
T ss_pred ccCHHHHHHHHHH----HHHHHCCCcEEEEe--cHHHHHHHHHcCCeecCcc
Confidence 9999999999999 88988888765432 33444 4557999987653
|
| >3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=99.52 E-value=4.2e-14 Score=153.00 Aligned_cols=80 Identities=18% Similarity=0.199 Sum_probs=70.7
Q ss_pred EEecHHHHHHHHcCCCeEEEcC-CccCCCCceeee---ChHHHHHHHHHHcCCCEEEEeeccccc---C----CCCcccc
Q 007903 237 KKVDVTRMRERLDGGCLVILSN-LGYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIR 305 (585)
Q Consensus 237 ~~v~~~~I~~lL~~G~IPVi~~-v~~~~~G~~~ni---d~D~lAa~lA~~L~AdkLIilTDV~gl---~----~~~~lI~ 305 (585)
..++.+.|+++|+.|.|||+++ ++.+++|.+.++ ++|.+|+.+|.+|+||+++++|||||+ | +++++|+
T Consensus 149 ~~~~~~~l~~~l~~~~v~Vv~Gf~g~~~~g~~~tl~rGgsD~~Aa~lA~~l~A~~~~i~TDVdGvyt~dP~~~~~a~~i~ 228 (446)
T 3tvi_A 149 EKKSYEKIKEKVLSCNKAVIPGFYGSSFNGDVKTFSRGGSDVTGSIISAGVNADLYENWTDVSGFLMADPRIVENPKTIS 228 (446)
T ss_dssp HHHHHHHHHHHTTTCSSEECCCSEEECTTSCEEECSSSTTHHHHHHHHHHTTCSEEEEEESSSSCBSSCTTTSSSCCBCS
T ss_pred hHhhHHHHHHHHhcCCeEEeeCceecCCCCCeEEEccCCchHHHHHHHHHcCCCEEEEEeCCCccCCCCCCcCCCCeEcc
Confidence 3456789999999999999998 478888988877 599999999999999999999999998 3 4689999
Q ss_pred cccHHHHHHHH
Q 007903 306 FLTLQEADSLI 316 (585)
Q Consensus 306 ~it~~e~~~li 316 (585)
+++.+|+.++.
T Consensus 229 ~is~~e~~ela 239 (446)
T 3tvi_A 229 KISYKELRELS 239 (446)
T ss_dssp EEEHHHHHHTT
T ss_pred eeCHHHHHHHH
Confidence 99999988874
|
| >2q0y_A GCN5-related N-acetyltransferase; YP_295895.1, acetyltransferase (GNAT) family, structural genomics, joint center for ST genomics; HET: MSE; 1.80A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=99.49 E-value=8.4e-14 Score=127.02 Aligned_cols=128 Identities=18% Similarity=0.191 Sum_probs=90.9
Q ss_pred cccccccccCHHHHHHHHHHHHHccccc-----cCC---HHHHHhcc----CeEEEEEECCeEEEEEEEeeec-------
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALV-----RRT---DEELLKAL----DSFYVVEREGQIIACAALFPFF------- 509 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~-----~~~---~e~l~~~i----~~~~Va~~dg~IVG~~~l~~~~------- 509 (585)
++||+++++|++++.+|........... .|. .+.+...+ ..++|++.+|++||++.+....
T Consensus 2 ~~IR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ivG~~~~~~~~~~~~~~~ 81 (153)
T 2q0y_A 2 MECRPLCIDDLELVCRHREAMFREAGRDALTLAAMQDPFRDWLLPRLADGSYFGWVMEEGGAPLAGIGLMVIEWPPHPSH 81 (153)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTSSEEEEEEETTEEEEEEEEEEEECCCBTTB
T ss_pred CEEEECCHHHHHHHHHHHHHHHHHcCCCcCcHHHHHHHHHHHHHHHhcCCCeeEEEEEeCCeEEEEEEEEeeccCCCCCC
Confidence 3699999999999999976554332110 111 11111111 3678899999999999886321
Q ss_pred --cCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceeccccccc-ccCeeecCccccccc
Q 007903 510 --KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYY-RLKFNCSSKSFHISL 582 (585)
Q Consensus 510 --~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YY-rlGF~~~~~~~~~~~ 582 (585)
....++|..|||+|+|||+|||++||++++ +++++.|+....+... ..+..|| ++||+..+ .|...+
T Consensus 82 ~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~----~~a~~~g~~~i~L~~~-~~A~~fY~k~GF~~~~-~~~~~l 151 (153)
T 2q0y_A 82 PLQDKRGYILNLYVDPSHRERGIGQALMNRAE----AEFAERGIAFAVLHAT-EMGQPLYARMGWSPTT-EMSKPI 151 (153)
T ss_dssp TTCSEEEEEEEEEECGGGCSSSHHHHHHHHHH----HHHHHTTCCCEEECCC-TTTHHHHHHTTCCCCC-CCCCCS
T ss_pred CCCCCcEEEEEEEECHHHcCCCHHHHHHHHHH----HHHHHCCCCEEEEEeC-HHHHHHHHHcCCccch-hhhhhc
Confidence 123578999999999999999999999999 9999999876544432 3444455 79999887 466554
|
| >2dxq_A AGR_C_4057P, acetyltransferase; structural genomics, PSI-2, protein struc initiative, midwest center for structural genomics, MCSG; 1.80A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.46 E-value=2.4e-13 Score=123.68 Aligned_cols=128 Identities=21% Similarity=0.244 Sum_probs=91.7
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHH----HHhcc----CeEEEEEECCeEEEEEEEeeecc-----CCceE
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEE----LLKAL----DSFYVVEREGQIIACAALFPFFK-----EKCGE 515 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~----l~~~i----~~~~Va~~dg~IVG~~~l~~~~~-----~~~ae 515 (585)
..||+++++|++.+.+++........ +++.+. +...+ ..+++++.+|++||++.+..... ...++
T Consensus 6 ~~iR~~~~~D~~~i~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~~~~ 83 (150)
T 2dxq_A 6 ISLRAAGPGDLPGLLELYQVLNPSDP--ELTTQEAGAVFAAMLAQPGLTIFVATENGKPVATATLLIVPNLTRAARPYAF 83 (150)
T ss_dssp EEEEECCGGGHHHHHHHHHHHCTTSC--CCCHHHHHHHHHHHHHSTTEEEEEEEETTEEEEEEEEEEECCSHHHHCCEEE
T ss_pred eEEEECChhhHHHHHHHHHHhccccc--cccHHHHHHHHHHHhcCCCceEEEEecCCEEEEEEEEEEecccccCCCceEE
Confidence 57999999999999999765432211 122222 22211 35778889999999999874322 23589
Q ss_pred EeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee--ccccccc-ccCeeecCccccccc
Q 007903 516 VAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR--GRTHSYY-RLKFNCSSKSFHISL 582 (585)
Q Consensus 516 I~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~--~~a~~YY-rlGF~~~~~~~~~~~ 582 (585)
|..++|+|+|||+|||++||++++ ++|++.|+....+.... ..+..|| ++||+.....|.+++
T Consensus 84 i~~l~V~p~~rg~GiG~~Ll~~~~----~~a~~~g~~~i~l~v~~~N~~A~~fY~k~GF~~~~~~~~~~~ 149 (150)
T 2dxq_A 84 IENVVTLEARRGRGYGRTVVRHAI----ETAFGANCYKVMLLTGRHDPAVHAFYESCGFVQNKTGFQIRQ 149 (150)
T ss_dssp EEEEECCGGGTTSSHHHHHHHHHH----HHHHHTTCSEEEEEECCCCHHHHHHHHHTTCEEEEEEEEEEC
T ss_pred EEEEEECHHHhCCCHHHHHHHHHH----HHHHHCCCCEEEEEeCCCChHHHHHHHHcCCcccceEEEEec
Confidence 999999999999999999999999 89999998875443322 2344455 799997777776654
|
| >3t9y_A Acetyltransferase, GNAT family; PSI-biology, structural genomics, midwest center for structu genomics, MCSG; HET: PGE; 2.00A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.46 E-value=5.1e-13 Score=119.40 Aligned_cols=124 Identities=15% Similarity=0.195 Sum_probs=88.6
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHHhcc--------CeEEEEEECCeEEEEEEEeeec----cCCceEE
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--------DSFYVVEREGQIIACAALFPFF----KEKCGEV 516 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i--------~~~~Va~~dg~IVG~~~l~~~~----~~~~aeI 516 (585)
..||+++++|++.+.+++... . .+++.+.+...+ ..+++++.+|++||++.+.... ....++|
T Consensus 9 ~~ir~~~~~D~~~i~~l~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~~~i 83 (150)
T 3t9y_A 9 RLFNNSDFEKLNQLCKLYDDL---G--YPTNENDLKKRLKKITNHDDYFLLLLIKENKIIGLSGMCKMMFYEKNAEYMRI 83 (150)
T ss_dssp EECCGGGGGCHHHHHHHHHHH---T--CCCCHHHHHHHHHHHHTSTTEEEEEEEETTEEEEEEEEEEEECSSSSCEEEEE
T ss_pred HHHHhcCHHHHHHHHHHHHHh---C--CCCCHHHHHHHHHHhhcCCceEEEEEEECCEEEEEEEEEEeccccccCCEEEE
Confidence 579999999999999996543 1 244444443322 4578889999999999987533 3467899
Q ss_pred eeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccce----eccc-ccccccCeeecCcccccc
Q 007903 517 AAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFL----RGRT-HSYYRLKFNCSSKSFHIS 581 (585)
Q Consensus 517 ~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~----~~~a-~~YYrlGF~~~~~~~~~~ 581 (585)
..++|+|+|||+|||++|+++++ +++++.|+....+... +..+ ..|.++||+..+..|..+
T Consensus 84 ~~~~v~p~~rg~Gig~~ll~~~~----~~~~~~g~~~i~l~~~~~~~N~~a~~~y~k~GF~~~~~~~~~~ 149 (150)
T 3t9y_A 84 LAFVIHSEFRKKGYGKRLLADSE----EFSKRLNCKAITLNSGNRNERLSAHKLYSDNGYVSNTSGFTKQ 149 (150)
T ss_dssp EEEEECGGGCSSSHHHHHHHHHH----HHHHHTTCSCEEECCCCCC------------CCCCCCCCCCCC
T ss_pred EEEEECHHHhccCHHHHHHHHHH----HHHHHcCCEEEEEEcCCCccchhHHHHHHHcCCEEecceEEEe
Confidence 99999999999999999999999 8888888876433322 1233 345579999998877654
|
| >3t90_A Glucose-6-phosphate acetyltransferase 1; GNAT fold, glcnac biosynthesis, alpha/beta protein; HET: EPE; 1.50A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.42 E-value=2.6e-13 Score=121.20 Aligned_cols=127 Identities=17% Similarity=0.195 Sum_probs=95.5
Q ss_pred cccccccccCHH-HHHHHHHHHHHccccccCCHHHHHhcc---------CeEEEEEE--CCeEEEEEEEeeec-----cC
Q 007903 449 EGTRTAKVTDLS-GIKQIIQPLVESGALVRRTDEELLKAL---------DSFYVVER--EGQIIACAALFPFF-----KE 511 (585)
Q Consensus 449 ~~IR~at~~D~~-~I~~Li~~~~~~~~~~~~~~e~l~~~i---------~~~~Va~~--dg~IVG~~~l~~~~-----~~ 511 (585)
..||+++++|++ .+.+++... ....+++.+.+...+ ..+++++. +|++||++.+.+.. ..
T Consensus 5 ~~ir~~~~~D~~~~i~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~ 81 (149)
T 3t90_A 5 FKIRKLEISDKRKGFIELLGQL---TVTGSVTDEEFDRRFEEIRSYGDDHVICVIEEETSGKIAATGSVMIEKKFLRNCG 81 (149)
T ss_dssp EEEEECCGGGGGTTHHHHHTTT---SCCCCCCHHHHHHHHHHHHTTGGGEEEEEEEETTTTEEEEEEEEEEEECSHHHHC
T ss_pred EEEEecCchhhHHHHHHHHHHH---hcCCCCCHHHHHHHHHHHHhCCCCcEEEEEEcCCCCcEEEEEEEEeccccCCCCC
Confidence 579999999999 999985532 222256666655522 34567777 79999999997521 24
Q ss_pred CceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceecccccccccCeeecCccccccc
Q 007903 512 KCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYYRLKFNCSSKSFHISL 582 (585)
Q Consensus 512 ~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YYrlGF~~~~~~~~~~~ 582 (585)
..++|..++|+|+|||+|+|++|+++++ +++++.|+....+.........|.++||+..+..+...+
T Consensus 82 ~~~~i~~~~V~p~~rg~Gig~~ll~~~~----~~~~~~g~~~i~l~~~~~n~~~y~k~GF~~~~~~~~~~~ 148 (149)
T 3t90_A 82 KAGHIEDVVVDSRFRGKQLGKKVVEFLM----DHCKSMGCYKVILDCSVENKVFYEKCGMSNKSIQMSKYF 148 (149)
T ss_dssp EEEEEEEEEECGGGTTSSHHHHHHHHHH----HHHHHTTCSEEECCCCGGGHHHHHTTTCCCCCCCCCCCC
T ss_pred CceEEEEEEECHHHhCCcHHHHHHHHHH----HHHHHCCCeEEEEeccccHHHHHHHCCCeeccceeeeec
Confidence 6789999999999999999999999999 889888987754433333345566899999988877665
|
| >3i3g_A N-acetyltransferase; malaria, structural genomics, structural genomics consortium, SGC,; 1.86A {Trypanosoma brucei} PDB: 3fb3_A | Back alignment and structure |
|---|
Probab=99.41 E-value=4.8e-13 Score=121.70 Aligned_cols=126 Identities=19% Similarity=0.228 Sum_probs=94.3
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHHhcc---------CeEEEEEECCeEEEEEEEeeec-----cCCce
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---------DSFYVVEREGQIIACAALFPFF-----KEKCG 514 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i---------~~~~Va~~dg~IVG~~~l~~~~-----~~~~a 514 (585)
..||+++++|++.+.+++..... ..+++.+.+...+ ..+++++.+|++||++.+.... ....+
T Consensus 21 ~~ir~~~~~D~~~i~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~~~ 97 (161)
T 3i3g_A 21 LELRVLEESDLSSHLELLGHLTE---APPLSGVELANIADMRRRAGIVTKVFCHQPTGRIVGSASLMIQPKFTRGGRAVG 97 (161)
T ss_dssp EEEEECCGGGHHHHHHHHTTTSC---CCCCCHHHHHHHHHHHHHTTCEEEEEEETTTTEEEEEEEEEEECCSSGGGCCEE
T ss_pred EEEEECcHhhHHHHHHHHHHhcc---CCCCCHHHHHHHHHHHhhcCCceEEEEEEcCCCeEEEEEEEeccCCCCCCccEE
Confidence 67999999999999999544222 1244555544422 3466777899999999997532 25688
Q ss_pred EEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceecccccccccCeeecCcccccc
Q 007903 515 EVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYYRLKFNCSSKSFHIS 581 (585)
Q Consensus 515 eI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YYrlGF~~~~~~~~~~ 581 (585)
+|..++|+|+|||+|||++|+++++ +++++.|+....+.........|.++||+..+..+.++
T Consensus 98 ~i~~~~V~p~~rg~Gig~~Ll~~~~----~~a~~~g~~~i~l~~~~~n~~~y~k~GF~~~~~~~~~~ 160 (161)
T 3i3g_A 98 HIEDVVVDPSYRGAGLGKALIMDLC----EISRSKGCYKVILDSSEKSLPFYEKLGFRAHERQMRLD 160 (161)
T ss_dssp EEEEEEECGGGTTTTHHHHHHHHHH----HHHHHTTCSEEEEEECTTTHHHHHHTTCEEEEEEEEEE
T ss_pred EEEEEEEcHHHcccCHHHHHHHHHH----HHHHHcCCcEEEEEecccchhHHHhcCCeecCceeecc
Confidence 9999999999999999999999999 88988888765443333334456689999998776654
|
| >1tiq_A Protease synthase and sporulation negative regulatory protein PAI 1; alpha-beta protein, structural genomics, PSI; HET: COA; 1.90A {Bacillus subtilis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.40 E-value=8.2e-13 Score=124.07 Aligned_cols=124 Identities=15% Similarity=0.162 Sum_probs=89.3
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCC-------------HHHHHhcc----CeEEEEEECCeEEEEEEEeeecc-
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRT-------------DEELLKAL----DSFYVVEREGQIIACAALFPFFK- 510 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~-------------~e~l~~~i----~~~~Va~~dg~IVG~~~l~~~~~- 510 (585)
++||+++++|++.+.+|........+....+ .+.+...+ ..++|++.++++|||+.+.....
T Consensus 3 ~~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~va~~~~~ivG~~~~~~~~~~ 82 (180)
T 1tiq_A 3 VKMKKCSREDLQTLQQLSIETFNDTFKEQNSPENMKAYLESAFNTEQLEKELSNMSSQFFFIYFDHEIAGYVKVNIDDAQ 82 (180)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHSSHHHHHHHHHCTTEEEEEEEETTEEEEEEEEEEGGGS
T ss_pred eEEEECCHHhHHHHHHHHHHHHHHHccccCCHHHHHHHHHHhCCHHHHHHHHcCCCceEEEEEECCEEEEEEEEEeCCCc
Confidence 4699999999999999976543332211112 22222222 35788889999999999875321
Q ss_pred -----CCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccce--eccccccc-ccCeeecCc
Q 007903 511 -----EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFL--RGRTHSYY-RLKFNCSSK 576 (585)
Q Consensus 511 -----~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~--~~~a~~YY-rlGF~~~~~ 576 (585)
...++|..|+|+|+|||+|||++||++++ ++|++.|+....+... +..+..|| ++||+..+.
T Consensus 83 ~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~----~~a~~~g~~~i~L~v~~~N~~A~~fY~k~GF~~~g~ 152 (180)
T 1tiq_A 83 SEEMGAESLEIERIYIKNSFQKHGLGKHLLNKAI----EIALERNKKNIWLGVWEKNENAIAFYKKMGFVQTGA 152 (180)
T ss_dssp SSCCCTTEEEEEEEEECGGGCSSSHHHHHHHHHH----HHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEEEEE
T ss_pred ccccCCCcEEEEEEEECHHHhCCCHHHHHHHHHH----HHHHHCCCCEEEEEehhcCHHHHHHHHHcCCEEcCc
Confidence 25789999999999999999999999999 8899999877544332 23444455 799998764
|
| >1z4e_A Transcriptional regulator; nysgxrc target T2017, GNAT fold, structural genomics, PSI, P structure initiative; 2.00A {Bacillus halodurans} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.38 E-value=1.1e-12 Score=118.86 Aligned_cols=129 Identities=15% Similarity=0.164 Sum_probs=89.0
Q ss_pred cccccccccCHHHHHHHHHHHHH-c-cc-cccCCHHH----HHhc---c-CeEEEEEECCeEEEEEEEeeecc-----CC
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVE-S-GA-LVRRTDEE----LLKA---L-DSFYVVEREGQIIACAALFPFFK-----EK 512 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~-~-~~-~~~~~~e~----l~~~---i-~~~~Va~~dg~IVG~~~l~~~~~-----~~ 512 (585)
+.||+++++|++.+.+++..... . .. ...+..+. +... - ..++|++.+|++||++.+..... ..
T Consensus 5 ~~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ivG~~~~~~~~~~~~~~~~ 84 (153)
T 1z4e_A 5 VTIREATEGDLEQMVHMLADDVLGRKRERYEKPLPVSYVRAFKEIKKDKNNELIVACNGEEIVGMLQVTFTPYLTYQGSW 84 (153)
T ss_dssp CEEEECCGGGHHHHHHHHHHSTTGGGTCCCCSSCCHHHHHHHHHHHHCTTEEEEEEEETTEEEEEEEEEEEECSHHHHCE
T ss_pred EEEEECCHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHcCCCeeEEEEecCCcEEEEEEEEecCCcccCCcc
Confidence 57999999999999999654110 0 01 10111111 1111 1 35778889999999998763221 23
Q ss_pred ceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccce--eccccccc-ccCeeecCcccccc
Q 007903 513 CGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFL--RGRTHSYY-RLKFNCSSKSFHIS 581 (585)
Q Consensus 513 ~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~--~~~a~~YY-rlGF~~~~~~~~~~ 581 (585)
.++|..++|+|+|||+|||++||++++ ++|++.|+....+... +..+..|| ++||+..+..|.++
T Consensus 85 ~~~i~~l~V~p~~rg~GiG~~Ll~~~~----~~a~~~g~~~i~l~v~~~N~~a~~~Y~k~GF~~~~~~~~~~ 152 (153)
T 1z4e_A 85 RATIEGVRTHSAARGQGIGSQLVCWAI----ERAKERGCHLIQLTTDKQRPDALRFYEQLGFKASHEGLKMH 152 (153)
T ss_dssp EEEEEEEEECTTSTTSSHHHHHHHHHH----HHHHHTTEEEEEEEEETTCTTHHHHHHHHTCEEEEEEEEEE
T ss_pred ceEEEEEEECHHHcCCCHHHHHHHHHH----HHHHHcCCCEEEEEEccCChHHHHHHHHcCCceeceeeEEc
Confidence 578999999999999999999999999 8899999876543322 23444455 79999988777654
|
| >3efa_A Putative acetyltransferase; structural genom 2, protein structure initiative, midwest center for structu genomics, MCSG; 2.42A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=99.38 E-value=1.6e-12 Score=117.21 Aligned_cols=123 Identities=10% Similarity=0.081 Sum_probs=89.7
Q ss_pred ccccccccccCHHHHHHHHHHHHHccccccCCHHHHHhcc----CeE-EEEEECCeEEEEEEEeeeccCCceEEeeEEEc
Q 007903 448 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSF-YVVEREGQIIACAALFPFFKEKCGEVAAIGVS 522 (585)
Q Consensus 448 ~~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i----~~~-~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~ 522 (585)
...||+++++|++++.++........ ..++.+...... ..+ ++.+.+|++||++.+.+ ..++.++|..++|+
T Consensus 4 ~~~ir~~~~~d~~~i~~l~~~~f~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~-~~~~~~~i~~~~V~ 80 (147)
T 3efa_A 4 MKIIFSASPANRAAAYALRQAVFVEE--RGISADVEFDVKDTDQCEYAVLYLQPDLPITTLRLEP-QADHVMRFGRVCTR 80 (147)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHTTTT--TCCCHHHHSCTTCSTTCCEEEEEEETTEEEEEEEEEE-CSTTEEEEEEEEEC
T ss_pred hHHhHcCCHhHHHHHHHHHHHHhhhc--cCCCcHHHHhccCCCCcEEEEEEcCCCeEEEEEEEEe-CCCCeEEEEEEEEc
Confidence 45799999999999999965443221 123332222222 344 44448999999999985 35578999999999
Q ss_pred cCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceeccccccc-ccCeeecCccc
Q 007903 523 PECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYY-RLKFNCSSKSF 578 (585)
Q Consensus 523 PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YY-rlGF~~~~~~~ 578 (585)
|+|||+|+|++|+++++ +++++.|+....+.. +..+..|| ++||+..+..+
T Consensus 81 p~~rg~Gig~~Ll~~~~----~~~~~~g~~~i~l~~-~~~a~~~y~~~Gf~~~~~~~ 132 (147)
T 3efa_A 81 KAYRGHGWGRQLLTAAE----EWATQRGFTHGEIHG-ELTAQRFYELCGYRVTAGPY 132 (147)
T ss_dssp GGGTTSSHHHHHHHHHH----HHHHHTTCCEEEEEE-EGGGHHHHHHTTCEEEECCC
T ss_pred HHHcCCCHHHHHHHHHH----HHHHHcCCCEEEEec-cHHHHHHHHHcCCcccCCcc
Confidence 99999999999999999 889999987754433 33444455 79999987654
|
| >1cjw_A Protein (serotonin N-acetyltransferase); HET: COT; 1.80A {Ovis aries} SCOP: d.108.1.1 PDB: 1b6b_A | Back alignment and structure |
|---|
Probab=99.37 E-value=2.2e-12 Score=116.61 Aligned_cols=124 Identities=17% Similarity=0.115 Sum_probs=93.6
Q ss_pred cccccccccCHHHHHHHHHHHHHcc-ccccCCHHHHHhcc----CeEEEEEECCeEEEEEEEeeec--------------
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESG-ALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFF-------------- 509 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~-~~~~~~~e~l~~~i----~~~~Va~~dg~IVG~~~l~~~~-------------- 509 (585)
..||+++++|++.+.++........ ...+++.+.+...+ ..++++..+|++||++.+.+..
T Consensus 6 ~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~ 85 (166)
T 1cjw_A 6 NEFRCLTPEDAAGVFEIEREAFISVSGNCPLNLDEVQHFLTLCPELSLGWFVEGRLVAFIIGSLWDEERLTQESLALHRP 85 (166)
T ss_dssp SEEECCCGGGHHHHHHHHHHHTHHHHSCCSCCHHHHHHHHHHCGGGEEEEEETTEEEEEEEEEEECSSSCCGGGGGCCCT
T ss_pred eeeecCCHHHHHHHHHHHHHhCCCCcccCccCHHHHHHHHhcCCCcEEEEEECCeEEEEEEeeeeccccccccccccccC
Confidence 5799999999999999976543321 12356666665554 4678889999999999987542
Q ss_pred cCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHc-CCcccCccceecccccccccCeeecCc
Q 007903 510 KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYD-HISTNGFPFLRGRTHSYYRLKFNCSSK 576 (585)
Q Consensus 510 ~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~-gi~~~g~~~~~~~a~~YYrlGF~~~~~ 576 (585)
..+.++|..++|+|+|||+|+|++|+++++ +++++. ++....+.........|.++||+..+.
T Consensus 86 ~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~----~~~~~~~g~~~i~l~~n~~a~~~y~k~GF~~~~~ 149 (166)
T 1cjw_A 86 RGHSAHLHALAVHRSFRQQGKGSVLLWRYL----HHVGAQPAVRRAVLMCEDALVPFYQRFGFHPAGP 149 (166)
T ss_dssp TCCEEEEEEEEECTTSTTSSHHHHHHHHHH----HHHHTSTTCCEEEEEECGGGHHHHHTTTEEEEEE
T ss_pred CCCceEEEEEEECHhhccCChHHHHHHHHH----HHHHHhcCcceEEEecCchHHHHHHHcCCeECCc
Confidence 356789999999999999999999999999 888884 887654432222334455899998864
|
| >1vkc_A Putative acetyl transferase; structural genomics, pyrococcus furiosus southeast collaboratory for structural genomics, secsg; 1.89A {Pyrococcus furiosus} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.37 E-value=2.5e-12 Score=117.25 Aligned_cols=129 Identities=16% Similarity=0.061 Sum_probs=93.9
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCH--------HHHHhcc----CeEEEEEEC-CeEEEEEEEeeec----cC
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTD--------EELLKAL----DSFYVVERE-GQIIACAALFPFF----KE 511 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~--------e~l~~~i----~~~~Va~~d-g~IVG~~~l~~~~----~~ 511 (585)
..||+++++|++.+.+++..........++.. +.+...+ ..+++++.+ |++||++.+.... ..
T Consensus 10 ~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~vG~~~~~~~~~~~~~~ 89 (158)
T 1vkc_A 10 EYTIVDGEEYIEEIKKLDREISYSFVRFPISYEEYEERHEELFESLLSQGEHKFFVALNERSELLGHVWICITLDTVDYV 89 (158)
T ss_dssp CEEEEECGGGHHHHHHHHHHHHGGGCCSCCCHHHHHHHHHHHHHHHHHSSEEEEEEEEETTCCEEEEEEEEEEECTTTCS
T ss_pred ceeccCCHHHHHHHHHHHHhhhHHhhcCCCCchhhhhhHHHHHHHHhcCCCcEEEEEEcCCCcEEEEEEEEEeccccCCC
Confidence 57999999999999999876554333334442 2222222 347888888 9999999987532 34
Q ss_pred CceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceec-ccc-cccccCeeecCcccccc
Q 007903 512 KCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRG-RTH-SYYRLKFNCSSKSFHIS 581 (585)
Q Consensus 512 ~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~-~a~-~YYrlGF~~~~~~~~~~ 581 (585)
+.++|..++|+|+|||+|+|++|+++++ +++++.|+....+..... .+. .|.++||+..+..+..+
T Consensus 90 ~~~~i~~~~v~p~~rg~Gig~~ll~~~~----~~~~~~g~~~i~l~~~~~n~a~~~y~k~GF~~~~~~~~~~ 157 (158)
T 1vkc_A 90 KIAYIYDIEVVKWARGLGIGSALLRKAE----EWAKERGAKKIVLRVEIDNPAVKWYEERGYKARALIMEKP 157 (158)
T ss_dssp EEEEEEEEEECGGGTTSSHHHHHHHHHH----HHHHHTTCSCEEECCCTTCTHHHHHHHTTCCCCCCCCCCC
T ss_pred CEEEEEEEEECHHHhCCCHHHHHHHHHH----HHHHHcCCcEEEEEEeCCCcHHHHHHHCCCEeeEEEEecc
Confidence 6789999999999999999999999999 888888887643321111 334 45579999988766554
|
| >4evy_A Aminoglycoside N(6')-acetyltransferase type 1; center for structural genomics of infectious diseases (csgid national institute of allergy and infectious diseases; HET: TOY; 1.77A {Acinetobacter haemolyticus} PDB: 4f0y_A 4e8o_A | Back alignment and structure |
|---|
Probab=99.36 E-value=1.1e-12 Score=120.65 Aligned_cols=122 Identities=16% Similarity=0.044 Sum_probs=88.3
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHHhcc----CeEEEEEECCeEEEEEEEeeec-------cCCceEEe
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFF-------KEKCGEVA 517 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i----~~~~Va~~dg~IVG~~~l~~~~-------~~~~aeI~ 517 (585)
++||+++++|++.+.+++...... ......+.+...+ ..+++++.+|++||++.+.... ..+.++|.
T Consensus 22 ~~ir~~~~~D~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~i~ 99 (166)
T 4evy_A 22 MNIKPASEASLKDWLELRNKLWSD--SEASHLQEMHQLLAEKYALQLLAYSDHQAIAMLEASIRFEYVNGTETSPVGFLE 99 (166)
T ss_dssp EEEEECCGGGHHHHHHHHHHHSCC--CHHHHHHHHHHHHTCTTEEEEEEEETTEEEEEEEEEEECSCCTTCSSSSEEEEE
T ss_pred cEEEECCHHHHHHHHHHHHHHhcC--CchHHHHHHHHHhcCCCceEEEEEECCeEEEEEEEEeecccccCCCCCCeEEEE
Confidence 679999999999999997553222 1011112233332 4578889999999999885321 15678999
Q ss_pred eEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceec---ccccccccCeeecCc
Q 007903 518 AIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRG---RTHSYYRLKFNCSSK 576 (585)
Q Consensus 518 ~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~---~a~~YYrlGF~~~~~ 576 (585)
.++|+|+|||+|||++||++++ +++++.|+....+..... ....|.++||+..+.
T Consensus 100 ~~~V~p~~rg~Gig~~Ll~~~~----~~a~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~ 157 (166)
T 4evy_A 100 GIYVLPAHRRSGVATMLIRQAE----VWAKQFSCTEFASDAALDNVISHAMHRSLGFQETEK 157 (166)
T ss_dssp EEEECGGGTTSSHHHHHHHHHH----HHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEEEE
T ss_pred EEEEChhhhcCCHHHHHHHHHH----HHHHHcCCCEEEEecCCCCHHHHHHHHHcCCEecce
Confidence 9999999999999999999999 889999988754332222 233455799998865
|
| >3mgd_A Predicted acetyltransferase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; HET: ACO; 1.90A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=99.36 E-value=3.4e-12 Score=114.90 Aligned_cols=124 Identities=20% Similarity=0.233 Sum_probs=89.7
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccC-C-HHH----HHhcc----CeEEEEEECCeEEEEEEEeeec--------c
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRR-T-DEE----LLKAL----DSFYVVEREGQIIACAALFPFF--------K 510 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~-~-~e~----l~~~i----~~~~Va~~dg~IVG~~~l~~~~--------~ 510 (585)
++||+++++|++.+.+++..........++ . .+. +...+ ..+++++.+|++||++.+.... .
T Consensus 2 ~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~~~ 81 (157)
T 3mgd_A 2 MNYRKADMKDISLLVSIRKRQLIDEGIEPNIDIDKELTRYFNNKLANNLLVEWIAEENNQIIATAAIAFIDFPPTYTNKT 81 (157)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHHTTCCCCSCCHHHHHHHHHHHHHTTSEEEEEEEETTEEEEEEEEEEEECCCBTTBTT
T ss_pred ceEEeCCHHHHHHHHHHHHHHHHHcCCCCcchhhHHHHHHHHHHhcCCceEEEEEEECCEEEEEEEEEeecCCCCccCcC
Confidence 469999999999999998765543321111 1 122 22222 3578889999999999887431 2
Q ss_pred CCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceecccccccccCeeecCc
Q 007903 511 EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYYRLKFNCSSK 576 (585)
Q Consensus 511 ~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YYrlGF~~~~~ 576 (585)
...++|..++|+|+|||+|||++|+++++ +++++.|+....+.........|.++||+..+.
T Consensus 82 ~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~----~~~~~~g~~~i~l~~n~~a~~~y~k~GF~~~~~ 143 (157)
T 3mgd_A 82 GRKGYITNMYTEPTSRGNGIATGMLDRLV----NEAKERNIHKICLVASKLGRPVYKKYGFQDTDE 143 (157)
T ss_dssp CEEEEEEEEEECGGGTTSSHHHHHHHHHH----HHHHHTTCCCEEECCCTTHHHHHHHHTCCCCTT
T ss_pred CcEEEEEEEEEcHHHcCCCHHHHHHHHHH----HHHHHCCCCEEEEEeCcccHHHHHHcCCeecce
Confidence 45789999999999999999999999999 888888888654433223333455799998765
|
| >4h89_A GCN5-related N-acetyltransferase; N-acyltransferase superfamily, structural genomics, PSI-BIOL midwest center for structural genomics, MCSG; 1.37A {Kribbella flavida} | Back alignment and structure |
|---|
Probab=99.36 E-value=8.5e-13 Score=123.29 Aligned_cols=123 Identities=20% Similarity=0.226 Sum_probs=87.1
Q ss_pred cccccccccCHHHHHHHHHHHHHccc----cccCCHHHHHhcc---------CeEEEEEECCeEEEEEEEeeecc--CCc
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGA----LVRRTDEELLKAL---------DSFYVVEREGQIIACAALFPFFK--EKC 513 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~----~~~~~~e~l~~~i---------~~~~Va~~dg~IVG~~~l~~~~~--~~~ 513 (585)
++||+++++|+++|.++++....... ..+.+.+...... ..+++++.||++||++.+.+... ...
T Consensus 9 ~~IR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dg~ivG~~~~~~~~~~~~~~ 88 (173)
T 4h89_A 9 LQVRDAEDADWPAILPFFREIVSAGETYAYDPELTDEQARSLWMTPSGAPQSRTTVAVDADGTVLGSANMYPNRPGPGAH 88 (173)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHHCSSCCCCTTCCHHHHHHHHSCCCC-CCCEEEEEECTTCCEEEEEEEEESSSGGGTT
T ss_pred eEEEECCHHHHHHHHHHHHHHHHhccccccCCCCCHHHHHHHHHhhhcCCCceEEEEEEeCCeEEEEEEEEecCCCCCce
Confidence 68999999999999999877655432 2223333332211 24566678899999999875432 223
Q ss_pred eEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccce---ecccc-cccccCeeecC
Q 007903 514 GEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFL---RGRTH-SYYRLKFNCSS 575 (585)
Q Consensus 514 aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~---~~~a~-~YYrlGF~~~~ 575 (585)
..+..++|+|+|||+|||++||++++ ++|++.|+....+... +..+. .|.++||+..+
T Consensus 89 ~~~~~~~V~p~~rg~GiG~~Ll~~~~----~~a~~~g~~~~~l~~~~~~N~~A~~~y~k~GF~~~G 150 (173)
T 4h89_A 89 VASASFMVAAAARGRGVGRALCQDMI----DWAGREGFRAIQFNAVVETNTVAVKLWQSLGFRVIG 150 (173)
T ss_dssp EEEEEEEECGGGTTSSHHHHHHHHHH----HHHHHTTCSEEEEEEEETTCHHHHHHHHHTTCEEEE
T ss_pred EEEEeeEEEEeeccchHHHHHHHHHH----HHHHHCCCcEEEEeeecccCHHHHHHHHHCCCEEEE
Confidence 44567999999999999999999999 9999999887543211 22333 45589999875
|
| >1u6m_A Acetyltransferase, GNAT family; structural genomics, PSI, protein structure initiative; 2.40A {Enterococcus faecalis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.35 E-value=2.7e-12 Score=122.35 Aligned_cols=123 Identities=20% Similarity=0.217 Sum_probs=88.7
Q ss_pred ccccccccCHHHHHHHHHHHHHcc---ccccCCHHHHHh----cc---------CeEEEEEECCeEEEEEEEeeec----
Q 007903 450 GTRTAKVTDLSGIKQIIQPLVESG---ALVRRTDEELLK----AL---------DSFYVVEREGQIIACAALFPFF---- 509 (585)
Q Consensus 450 ~IR~at~~D~~~I~~Li~~~~~~~---~~~~~~~e~l~~----~i---------~~~~Va~~dg~IVG~~~l~~~~---- 509 (585)
.||+++++|+++|.+|+....... +...++.+.+.. .+ ..++|++.+|++||++.+.+..
T Consensus 3 ~IR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~g~ivG~~~~~~~~~~~~ 82 (199)
T 1u6m_A 3 LIRSATKEDGQAIARLVLVILKDMELPILEEVSEEQMIDLLAEATAYPTYRYGYQRILVYEHAGEVAGIAVGYPAEDEKI 82 (199)
T ss_dssp EEEECCGGGHHHHHHHHHHHHHHSCCGGGGTSCHHHHHHHHHHHHTSTTSTTCGGGEEEEEETTEEEEEEEEEEGGGTTT
T ss_pred ccccCChHHHHHHHHHHHHHHhhhHHHHhccCCHHHHHHHHHHHHhCCCCccccccEEEEEECCeEEEEEEEecCcHHHH
Confidence 499999999999999987654431 112233333221 11 2478999999999999876421
Q ss_pred --------------------------cCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee--c
Q 007903 510 --------------------------KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR--G 561 (585)
Q Consensus 510 --------------------------~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~--~ 561 (585)
.+...+|..|+|+|+|||+|||++||++++ ++|++.|+....+.... .
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~----~~a~~~g~~~i~L~v~~~N~ 158 (199)
T 1u6m_A 83 IDEPLREVFKKHGLAEDVRLFIEEETLPNEWYLDTISVDERFRGMGIGSKLLDALP----EVAKASGKQALGLNVDFDNP 158 (199)
T ss_dssp SSHHHHHHHHHTTSCTTCCCCCCCCCCTTEEEEEEEEECGGGTTSSHHHHHHHTHH----HHHHTTTCSEEEEEEETTCH
T ss_pred HHHHHHHHHHHcCccccccceecccCCCCeEEEEEEEECHHHcCCCHHHHHHHHHH----HHHHHcCCCEEEEEEecCCH
Confidence 123578999999999999999999999999 99999998765444322 2
Q ss_pred cccc-ccccCeeecCc
Q 007903 562 RTHS-YYRLKFNCSSK 576 (585)
Q Consensus 562 ~a~~-YYrlGF~~~~~ 576 (585)
.+.. |.++||+..+.
T Consensus 159 ~A~~fY~k~GF~~~~~ 174 (199)
T 1u6m_A 159 GARKLYASKGFKDVTT 174 (199)
T ss_dssp HHHHHHHTTTCEEEEE
T ss_pred HHHHHHHHCCCEEccE
Confidence 3444 55799998754
|
| >4ag7_A Glucosamine-6-phosphate N-acetyltransferase; HET: COA; 1.55A {Caenorhabditis elegans} PDB: 4ag9_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=2.5e-12 Score=116.97 Aligned_cols=127 Identities=19% Similarity=0.184 Sum_probs=93.0
Q ss_pred cccccccccCHH-HHHHHHHHHHHccccccCCHHHHHhcc---------CeEEEEEE--CCeEEEEEEEeeec-----cC
Q 007903 449 EGTRTAKVTDLS-GIKQIIQPLVESGALVRRTDEELLKAL---------DSFYVVER--EGQIIACAALFPFF-----KE 511 (585)
Q Consensus 449 ~~IR~at~~D~~-~I~~Li~~~~~~~~~~~~~~e~l~~~i---------~~~~Va~~--dg~IVG~~~l~~~~-----~~ 511 (585)
..||+++++|++ .+.+++...... .+++.+.+...+ ..+++++. +|++||++.+.... ..
T Consensus 22 ~~iR~~~~~D~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ivG~~~~~~~~~~~~~~~ 98 (165)
T 4ag7_A 22 FKVRPLAKDDFSKGYVDLLSQLTSV---GNLDQEAFEKRFEAMRTSVPNYHIVVIEDSNSQKVVASASLVVEMKFIHGAG 98 (165)
T ss_dssp EEEEECBGGGGTTTHHHHHHHHSCC---TTCCHHHHHHHHHHHHTCSSCCEEEEEEETTTTEEEEEEEEEEEECSHHHHC
T ss_pred EEEeeCCHhHHHHHHHHHHHHhhcC---CCCCHHHHHHHHHHHhcCCCceEEEEEEeCCCCeEEEEEEEEecccccCCCC
Confidence 579999999999 588886643222 223444443322 45678887 99999999987311 23
Q ss_pred CceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceecccccccccCeeecCccccccc
Q 007903 512 KCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYYRLKFNCSSKSFHISL 582 (585)
Q Consensus 512 ~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YYrlGF~~~~~~~~~~~ 582 (585)
..++|..++|+|+|||+|||++|+++++ +++++.|+....+.........|.++||+..+..+.++|
T Consensus 99 ~~~~i~~~~V~p~~rg~Gig~~Ll~~~~----~~a~~~g~~~i~l~~~~~n~~~Y~k~GF~~~~~~~~~r~ 165 (165)
T 4ag7_A 99 SRGRVEDVVVDTEMRRQKLGAVLLKTLV----SLGKSLGVYKISLECVPELLPFYSQFGFQDDCNFMTQRF 165 (165)
T ss_dssp EEEEEEEEEECGGGTTSSHHHHHHHHHH----HHHHHHTCSEEEECSCGGGHHHHHTTTCEECCCCEEECC
T ss_pred cEEEEEEEEECHHhcCCCHHHHHHHHHH----HHHHHcCCeEEEEEeCHHHHHHHHHCCCCcccchhhccC
Confidence 5788999999999999999999999999 888888987654433333344566899999888776653
|
| >2pdo_A Acetyltransferase YPEA; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: MSE; 2.00A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.35 E-value=3.3e-12 Score=115.10 Aligned_cols=119 Identities=17% Similarity=0.211 Sum_probs=87.4
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCC--HHHHHhcc----CeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEc
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRT--DEELLKAL----DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVS 522 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~--~e~l~~~i----~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~ 522 (585)
+.||+++++|++.+.+++... ....+|. .+.+...+ ..+++++.+|++||++.+.. ....++|..++|+
T Consensus 4 ~~ir~~~~~D~~~i~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ivG~~~~~~--~~~~~~i~~l~V~ 78 (144)
T 2pdo_A 4 MEIRVFRQEDFEEVITLWERC---DLLRPWNDPEMDIERKMNHDVSLFLVAEVNGEVVGTVMGGY--DGHRGSAYYLGVH 78 (144)
T ss_dssp EEEEECCGGGHHHHHHHHHHT---TCCBTTBCHHHHHHHHHHHCCTTEEEEEETTEEEEEEEEEE--CSSCEEEEEEEEC
T ss_pred eEEEECchhhHHHHHHHHhcc---cccCCccchHHHHHHHhhCCCccEEEEEcCCcEEEEEEeec--CCCceEEEEEEEC
Confidence 579999999999999986543 2222332 22333222 45788899999999998763 3457899999999
Q ss_pred cCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccce--eccccc-ccccCeeecCc
Q 007903 523 PECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFL--RGRTHS-YYRLKFNCSSK 576 (585)
Q Consensus 523 PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~--~~~a~~-YYrlGF~~~~~ 576 (585)
|+|||+|||++||++++ +.+++.|+....+... +..+.. |.++||...+.
T Consensus 79 p~~rg~GiG~~Ll~~~~----~~~~~~g~~~i~l~v~~~n~~a~~~Y~k~GF~~~~~ 131 (144)
T 2pdo_A 79 PEFRGRGIANALLNRLE----KKLIARGCPKIQINVPEDNDMVLGMYERLGYEHADV 131 (144)
T ss_dssp GGGTTSCHHHHHHHHHH----HHHHHTTCCEEEEEEESSCHHHHHHHHHTTCEECSE
T ss_pred ccccCCcHHHHHHHHHH----HHHHHcCCCEEEEEEeCCCHHHHHHHHHcCCcccce
Confidence 99999999999999999 8899999876543322 223334 55799998754
|
| >2aj6_A Hypothetical protein MW0638; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL; 1.63A {Staphylococcus aureus subsp} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.34 E-value=3.6e-12 Score=116.89 Aligned_cols=130 Identities=15% Similarity=0.075 Sum_probs=78.7
Q ss_pred cccccccccCHHHHHHHHHHHHHccc-cccCC---HH----HHHhcc----CeEEEEEECCeEEEEEEEeeeccCCceEE
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGA-LVRRT---DE----ELLKAL----DSFYVVEREGQIIACAALFPFFKEKCGEV 516 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~-~~~~~---~e----~l~~~i----~~~~Va~~dg~IVG~~~l~~~~~~~~aeI 516 (585)
..||+++++|++++.++++....... ..... .+ .+...+ ..+++++.+|++||++.+........++|
T Consensus 14 ~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~i 93 (159)
T 2aj6_A 14 RTLNKDEHNYIKQIANIHETLLSQVESNYKCTKLSIALRYEMICSRLEHTNDKIYIYENEGQLIAFIWGHFSNEKSMVNI 93 (159)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHHHTCSSCCCCHHHHHHHHHHHHHHHHSSSEEEEEEEETTEEEEEEEEEEETTTTEEEE
T ss_pred hhcCCCchhhHHHHHHHHHHHHhccccccccCCCCHHHHHHHHHHHHhCCCcEEEEEEECCeEEEEEEEEeecCCCEEEE
Confidence 57999999999999999876543321 11111 11 122211 45788889999999999875445678999
Q ss_pred eeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee--c-ccccccccCeeecCccccccc
Q 007903 517 AAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR--G-RTHSYYRLKFNCSSKSFHISL 582 (585)
Q Consensus 517 ~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~--~-~a~~YYrlGF~~~~~~~~~~~ 582 (585)
..++|+|+|||+|+|++|+++++ +++++.++......... . ....|.++||+..+..|..++
T Consensus 94 ~~~~V~p~~rg~Gig~~ll~~~~----~~~~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~~~~~~l 158 (159)
T 2aj6_A 94 ELLYVEPQFRKLGIATQLKIALE----KWAKTMNAKRISNTIHKNNLPMISLNKDLGYQVSHVKMYKDI 158 (159)
T ss_dssp EEEEECGGGTTSSHHHHHHHHHH----HHHHHTTCSCCCCC----------------------------
T ss_pred EEEEECHHHccCCHHHHHHHHHH----HHHHHcCCcEEEEEeccCCHHHHHHHHHCCCEEeeeEEEecC
Confidence 99999999999999999999999 88888888765433221 2 334455899999887766554
|
| >2bei_A Diamine acetyltransferase 2; SSAT2, BC011751, AAH11751, thialysine N-acetyltransferase, structural genomics, protein structure initiative, PSI; HET: ACO; 1.84A {Homo sapiens} SCOP: d.108.1.1 PDB: 2q4v_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=5.6e-12 Score=117.33 Aligned_cols=122 Identities=24% Similarity=0.247 Sum_probs=86.9
Q ss_pred cccccccccCHHHHHHHHHHHHHcc---ccccCCHHHHHhc-c-----CeEEEEEE--------CCeEEEEEEEeeec--
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESG---ALVRRTDEELLKA-L-----DSFYVVER--------EGQIIACAALFPFF-- 509 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~---~~~~~~~e~l~~~-i-----~~~~Va~~--------dg~IVG~~~l~~~~-- 509 (585)
..||+++++|++.+.+++....... ...+++.+.+... + ..++|++. ++++|||+.+....
T Consensus 4 ~~IR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~~~~ivG~~~~~~~~~~ 83 (170)
T 2bei_A 4 VRIREAKEGDCGDILRLIRELAEFEKLSDQVKISEEALRADGFGDNPFYHCLVAEILPAPGKLLGPCVVGYGIYYFIYST 83 (170)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHHTC----CCCHHHHHHHHHSSSCSCEEEEEEEC-------CCEEEEEEEEEEEEET
T ss_pred eEEEECCHHHHHHHHHHHHHHHHHhccccccccCHHHHHHHhcCCCCcEEEEEEEeccccCCCCCCcEEEEEEEEeeccc
Confidence 5699999999999999976543211 1223455554432 1 24577776 78999999875321
Q ss_pred -cCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee--ccccccc-ccCeeec
Q 007903 510 -KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR--GRTHSYY-RLKFNCS 574 (585)
Q Consensus 510 -~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~--~~a~~YY-rlGF~~~ 574 (585)
..+.++|..|+|+|+|||+|||++||++++ +++++.|+....+.... ..+..|| ++||+..
T Consensus 84 ~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~----~~a~~~g~~~i~L~v~~~N~~A~~fY~k~GF~~~ 148 (170)
T 2bei_A 84 WKGRTIYLEDIYVMPEYRGQGIGSKIIKKVA----EVALDKGCSQFRLAVLDWNQRAMDLYKALGAQDL 148 (170)
T ss_dssp TTEEEEEEEEEEECGGGCSSSHHHHHHHHHH----HHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEH
T ss_pred cCCCcEEEEEEEEChHhcCCCHHHHHHHHHH----HHHHHCCCCEEEEEEeccCHHHHHHHHHCCCEec
Confidence 234678999999999999999999999999 99999998875443322 2444555 7999965
|
| >3gy9_A GCN5-related N-acetyltransferase; YP_001815201.1, putative acetyltransferase; HET: MSE COA SO4; 1.52A {Exiguobacterium sibiricum 255-15} PDB: 3gya_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=1.6e-12 Score=116.71 Aligned_cols=119 Identities=16% Similarity=0.145 Sum_probs=90.0
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHHhc--------cCeEEEEEECCeEEEEEEEeeec--cCCceEEee
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKA--------LDSFYVVEREGQIIACAALFPFF--KEKCGEVAA 518 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~--------i~~~~Va~~dg~IVG~~~l~~~~--~~~~aeI~~ 518 (585)
..||+++++|.+.+.+++.......+. +..+..... -..+++++.+|++||++.+.... ....++|..
T Consensus 4 ~~ir~~~~~D~~~i~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~~i~~ 81 (150)
T 3gy9_A 4 VTIERVNDFDGYNWLPLLAKSSQEGFQ--LVERMLRNRREESFQEDGEAMFVALSTTNQVLACGGYMKQSGQARTGRIRH 81 (150)
T ss_dssp CEEEECSCGGGSCCHHHHHHHHHTTCC--HHHHHHHTTTTSCSCSTTCEEEEEECTTCCEEEEEEEEECTTSTTEEEEEE
T ss_pred EEEEECcccCHHHHHHHHHHHHHhccc--chHHHHHHHHHhhhcCCCcEEEEEEeCCeEEEEEEEEeccCCCCCeEEEEE
Confidence 579999999999999998776655332 111111111 15688999999999999987532 467899999
Q ss_pred EEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceeccccc-ccccCeeecCc
Q 007903 519 IGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHS-YYRLKFNCSSK 576 (585)
Q Consensus 519 L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~-YYrlGF~~~~~ 576 (585)
++|+|+|||+|||++||++++ +++++ ++....+.. ..+.. |.++||+..+.
T Consensus 82 l~V~p~~rg~Gig~~Ll~~~~----~~a~~-~~~~i~l~~--~~a~~~y~k~GF~~~~~ 133 (150)
T 3gy9_A 82 VYVLPEARSHGIGTALLEKIM----SEAFL-TYDRLVLYS--EQADPFYQGLGFQLVSG 133 (150)
T ss_dssp EEECGGGTTSSHHHHHHHHHH----HHHTT-TCSEEEECC--SSCHHHHHHTTCEECCC
T ss_pred EEECHhhcCCCHHHHHHHHHH----HHHHh-CCCEEEEec--hHHHHHHHHCCCEEeee
Confidence 999999999999999999999 88888 877655444 34444 55799998754
|
| >3kkw_A Putative uncharacterized protein; acetyltransferase, GNAT family, structural genomics, PSI, protein structure initiative; 1.41A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.33 E-value=2.3e-12 Score=120.87 Aligned_cols=124 Identities=19% Similarity=0.225 Sum_probs=93.7
Q ss_pred cccccccccCHHHHHHHHHHHHHc-----cccccCCHHHHHhcc---CeEEEEEECCeEEEEEEEeeeccCCceEEeeEE
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVES-----GALVRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIG 520 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~-----~~~~~~~~e~l~~~i---~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~ 520 (585)
..||+++++|++.+.+++...... ....+++.+.+...+ ..++|++.+|++||++.+........++|..++
T Consensus 25 ~~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~ivG~~~~~~~~~~~~~~i~~l~ 104 (182)
T 3kkw_A 25 LSHRPAETGDLETVAGFPQDRDELFYCYPKAIWPFSVAQLAAAIAERRGSTVAVHDGQVLGFANFYQWQHGDFCALGNMM 104 (182)
T ss_dssp CEEEECCGGGHHHHHTCCCSHHHHHHHCTTCCSSCCHHHHHHHHHHSEEEEEEEETTEEEEEEEEEEEETTTEEEEEEEE
T ss_pred EEEEeCCHHHHHHHHHHHHhHHHHhhhccccCCCCCHHHHHHHhcCCccEEEEEeCCeEEEEEEEEeecCCceEEEEEEE
Confidence 679999999999999997654221 123456777776665 467899999999999999865555689999999
Q ss_pred EccCCcCCcHHHHHHHHHHhhhHHHHHHc-CCcccCccce--ecccc-cccccCeeecCc
Q 007903 521 VSPECRGQGQGDKLLGLCIWPLLSETRYD-HISTNGFPFL--RGRTH-SYYRLKFNCSSK 576 (585)
Q Consensus 521 V~PeyRGkGIGk~LL~~~~~~a~~~A~~~-gi~~~g~~~~--~~~a~-~YYrlGF~~~~~ 576 (585)
|+|+|||+|||++|+++++ +++++. ++....+... +..+. .|.++||+..+.
T Consensus 105 V~p~~rg~Gig~~Ll~~~~----~~a~~~~~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~ 160 (182)
T 3kkw_A 105 VAPAARGLGVARYLIGVME----NLAREQYKARLMKISCFNANAAGLLLYTQLGYQPRAI 160 (182)
T ss_dssp ECGGGTTSSHHHHHHHHHH----HHHHHHHCCSEEEEEEETTCHHHHHHHHHTTCEEEEE
T ss_pred ECHHHcCCCHHHHHHHHHH----HHHHhcCCccEEEEEEecCCHHHHHHHHHCCCeEecc
Confidence 9999999999999999999 888877 6644322211 22333 455799997654
|
| >3bln_A Acetyltransferase GNAT family; NP_981174.1, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE MRD GOL; 1.31A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.33 E-value=1.4e-12 Score=116.11 Aligned_cols=120 Identities=17% Similarity=0.140 Sum_probs=87.8
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHHhcc--CeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCCc
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECR 526 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i--~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyR 526 (585)
++||+++++|++.+.++..... ..++..+.+...+ ..++++..+|++||++.+... ..+.+++..++|+|+||
T Consensus 3 ~~ir~~~~~D~~~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~-~~~~~~i~~~~v~p~~r 77 (143)
T 3bln_A 3 KNVTKASIDDLDSIVHIDIDVI----GNDSRRNYIKHSIDEGRCVIVKEDNSISGFLTYDTN-FFDCTFLSLIIVSPTKR 77 (143)
T ss_dssp EEEEECCGGGHHHHHHHHHHHH----SSSTTHHHHHHHHHTTCEEEEEETTEEEEEEEEEEE-ETTEEEEEEEEECTTCC
T ss_pred eeEEECCHhhHHHHHHHHHHcc----CchhHHHHHHHHhCCCeEEEEEeCCeEEEEEEEEec-CCCceEEEEEEECHHHc
Confidence 5799999999999999955433 2345555555444 567888899999999999853 35688999999999999
Q ss_pred CCcHHHHHHHHHHhhhHHHHHHcCCcccCccceecccccccccCeeecCcc
Q 007903 527 GQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYYRLKFNCSSKS 577 (585)
Q Consensus 527 GkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YYrlGF~~~~~~ 577 (585)
|+|+|++|+++++ +++++.++..............|.++||+..+..
T Consensus 78 g~Gig~~ll~~~~----~~~~~~~i~~~~~~~n~~a~~~y~k~Gf~~~~~~ 124 (143)
T 3bln_A 78 RRGYASSLLSYML----SHSPTQKIFSSTNESNESMQKVFNANGFIRSGIV 124 (143)
T ss_dssp SSCHHHHHHHHHH----HHCSSSEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred CCChHHHHHHHHH----HHHhhCCeEEEEcccCHHHHHHHHHCCCeEeeEE
Confidence 9999999999999 7776665432211111123344558999987543
|
| >2atr_A Acetyltransferase, GNAT family; MCSG, structural genomics, PSI, protein structure INIT midwest center for structural genomics; 2.01A {Streptococcus pneumoniae} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.33 E-value=2.1e-12 Score=113.95 Aligned_cols=121 Identities=15% Similarity=0.093 Sum_probs=84.0
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHHhcc---CeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCC
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPEC 525 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i---~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~Pey 525 (585)
..||+++++|++.+.+++...... ..+.+.+.+...+ ..++++..+|++||++.+.. .....++|..++|+|+|
T Consensus 2 ~~ir~~~~~D~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~-~~~~~~~i~~~~v~p~~ 78 (138)
T 2atr_A 2 ITIKKQEIVKLEDVLHLYQAVGWT--NYTHQTEMLEQALSHSLVIYLALDGDAVVGLIRLVG-DGFSSVFVQDLIVLPSY 78 (138)
T ss_dssp EEEEEESCCCHHHHHHHHHTTCCC--C-----CHHHHHHTSCSEEEEEEETTEEEEEEEEEE-CSSSEEEEEEEEECTTS
T ss_pred eEEEEcCccCHHHHHHHHHHcCCC--chhhhHHHHHHhcCCCeEEEEEEECCeeEEEEEEEe-CCCCeEEEEEEEEchhh
Confidence 468999999999999996542111 1122334444333 45688899999999998873 44568999999999999
Q ss_pred cCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceecccccccccCeeecCc
Q 007903 526 RGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYYRLKFNCSSK 576 (585)
Q Consensus 526 RGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YYrlGF~~~~~ 576 (585)
||+|+|++|+++++ +++++.++..............|.++||+..+.
T Consensus 79 rg~Gig~~ll~~~~----~~~~~~~~~~l~~~~n~~a~~~y~k~Gf~~~~~ 125 (138)
T 2atr_A 79 QRQGIGSSLMKEAL----GNFKEAYQVQLATEETEKNVGFYRSMGFEILST 125 (138)
T ss_dssp CSSSHHHHHHHHHH----GGGTTCSEEECCCCCCHHHHHHHHHTTCCCGGG
T ss_pred cCCCHHHHHHHHHH----HHHHhcCeEEEEeCCChHHHHHHHHcCCcccce
Confidence 99999999999999 777777763221111112333455799998764
|
| >4e0a_A BH1408 protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG, transferase; 1.80A {Bacillus halodurans} PDB: 4f6a_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=4.4e-12 Score=114.53 Aligned_cols=127 Identities=17% Similarity=0.215 Sum_probs=92.1
Q ss_pred cccccccccCHHHHHHHHHHHHHccc----------cccCCHHHHHhcc----CeEEEEEECC-eEEEEEEEeeecc---
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGA----------LVRRTDEELLKAL----DSFYVVEREG-QIIACAALFPFFK--- 510 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~----------~~~~~~e~l~~~i----~~~~Va~~dg-~IVG~~~l~~~~~--- 510 (585)
++||+++++|++.+.+++........ ..++..+.+...+ ..++|++.++ ++||++.+.....
T Consensus 1 ~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~~vG~~~~~~~~~~~~ 80 (164)
T 4e0a_A 1 MIIREATVQDYEEVARLHTQVHEAHVKERGDIFRSNEPTLNPSRFQAAVQGEKSTVLVFVDEREKIGAYSVIHLVQTPLL 80 (164)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHHHHHHCTTTBCCCSSSSCHHHHHHHHHCSSEEEEEEEEETTEEEEEEEEEEEEECCC
T ss_pred CEEEEcCccCHHHHHHHHHHHHHHHhccCCccccccchHHHHHHHHHHhcCCceEEEEEECCCCcEEEEEEEEecCCCCC
Confidence 36899999999999999876543210 2234555555544 4677888877 9999999875321
Q ss_pred -----CCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee--cccc-cccccCeeecCcccc
Q 007903 511 -----EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR--GRTH-SYYRLKFNCSSKSFH 579 (585)
Q Consensus 511 -----~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~--~~a~-~YYrlGF~~~~~~~~ 579 (585)
.+.++|..++|+|+|||+|+|++|+++++ +++++.|+....+.... ..+. .|.++||+..+....
T Consensus 81 ~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~----~~~~~~g~~~i~l~~~~~n~~a~~~y~k~GF~~~~~~~~ 153 (164)
T 4e0a_A 81 PTMQQRKTVYISDLCVDETRRGGGIGRLIFEAII----SYGKAHQVDAIELDVYDFNDRAKAFYHSLGMRCQKQTME 153 (164)
T ss_dssp SSBCCEEEEEEEEEEECGGGCSSSHHHHHHHHHH----HHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEEEEEEEE
T ss_pred ccccCCcEEEEEEEEECHHHhcCChHHHHHHHHH----HHHHHcCCCEEEEEEEcCCHHHHHHHHHcCCEEeceecc
Confidence 23589999999999999999999999999 88888888765433221 2333 455799998865443
|
| >3dsb_A Putative acetyltransferase; APC60368.2, ST genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE; 1.48A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.32 E-value=6.7e-12 Score=112.26 Aligned_cols=127 Identities=14% Similarity=0.058 Sum_probs=88.6
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHH----HHhcc-----CeEEEEEECCeEEEEEEEeeec----cCCceE
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEE----LLKAL-----DSFYVVEREGQIIACAALFPFF----KEKCGE 515 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~----l~~~i-----~~~~Va~~dg~IVG~~~l~~~~----~~~~ae 515 (585)
..||+++++|++.+.++...........+.+.+. +...+ ..+++++.+|++||++.+.+.. ....++
T Consensus 7 ~~ir~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~~~ 86 (157)
T 3dsb_A 7 IEIREARMDDLDTIAKFNYNLAKETEGKELDMDVLTKGVKALLLDERKGKYHVYTVFDKVVAQIMYTYEWSDWRNGNFLW 86 (157)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCGGGCEEEEEEETTEEEEEEEEEEEEETTTTEEEEE
T ss_pred EEEEeCCHHHHHHHHHHHHHHHHHHhcCCCCcchhHHHHHHHHhCcCcceEEEEEeCCcEEEEEEEEEeccccCCCceEE
Confidence 5799999999999999866554321111222222 22211 5678889999999999986422 123467
Q ss_pred EeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcC-CcccCccce--ecccc-cccccCeeecCcccc
Q 007903 516 VAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDH-ISTNGFPFL--RGRTH-SYYRLKFNCSSKSFH 579 (585)
Q Consensus 516 I~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~g-i~~~g~~~~--~~~a~-~YYrlGF~~~~~~~~ 579 (585)
|..++|+|+|||+|+|++|+++++ +++++.+ +........ +..+. .|.++||+..+..++
T Consensus 87 i~~~~V~p~~rg~Gig~~ll~~~~----~~~~~~~~~~~i~~~~~~~n~~a~~~y~k~Gf~~~~~~~~ 150 (157)
T 3dsb_A 87 IQSVYVDKEYRRKGIFNYLFNYIK----NICDKDENIVGMRLYVEKENINAKATYESLNMYECDYNMY 150 (157)
T ss_dssp EEEEEECGGGCSSSHHHHHHHHHH----HHHHHCTTEEEEEEEEETTCTTHHHHHHTTTCEECSEEEE
T ss_pred EEEEEECHHHhcCCHHHHHHHHHH----HHHHhcCCceEEEEecCCCCHHHHHHHHHCCCEEecceee
Confidence 999999999999999999999999 9999998 655433222 12333 455799998876543
|
| >2ozh_A Hypothetical protein XCC2953; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.40A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.31 E-value=1e-11 Score=111.18 Aligned_cols=119 Identities=13% Similarity=0.133 Sum_probs=88.7
Q ss_pred ccc-cccccCHHHHHHHHHHHHHccccccCCHHHHHhcc--CeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCCc
Q 007903 450 GTR-TAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECR 526 (585)
Q Consensus 450 ~IR-~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i--~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyR 526 (585)
.|| .++++|++.+.+++.. ...+..+.+.+.+...+ ..++++..++++||++.+.. .....++|..++|+|+||
T Consensus 6 ~i~~~~~~~D~~~i~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~-~~~~~~~i~~~~v~p~~r 82 (142)
T 2ozh_A 6 HVSTDNSLLDIGLIHRTLSQ--DTDWAKDIPLALVQRAIDHSLCFGGFVDGRQVAFARVIS-DYATFAYLGDVFVLPEHR 82 (142)
T ss_dssp EEECCGGGCCHHHHHHHHHH--HCSTTTTCCHHHHHHHHHTSEEEEEEETTEEEEEEEEEE-CSSSEEEEEEEEECGGGT
T ss_pred EecCCCchhhHHHHHHHHhh--ccccCCCCCHHHHHHHhccCcEEEEEECCEEEEEEEEEe-cCCCcEEEEEEEECHHHc
Confidence 455 7899999999999654 12333344556665554 57788889999999999884 345678999999999999
Q ss_pred CCcHHHHHHHHHHhhhHHHHHHcCCcccCccceecccccccccCeeecCc
Q 007903 527 GQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYYRLKFNCSSK 576 (585)
Q Consensus 527 GkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YYrlGF~~~~~ 576 (585)
|+|+|++|+++++ +.+++.|+....+... .....|.++||+..+.
T Consensus 83 g~Gig~~ll~~~~----~~~~~~g~~~i~l~~~-~a~~~y~k~GF~~~~~ 127 (142)
T 2ozh_A 83 GRGYSKALMDAVM----AHPDLQGLRRFSLATS-DAHGLYARYGFTPPLF 127 (142)
T ss_dssp TSSHHHHHHHHHH----HCGGGSSCSEEECCCS-SCHHHHHTTTCCSCSS
T ss_pred CCCHHHHHHHHHH----HHHHhCCCCEEEEecc-hHHHHHHHCCCEEcCC
Confidence 9999999999999 7777788776433322 2333455799998754
|
| >1qsm_A HPA2 histone acetyltransferase; protein-acetyl coenzyme A complex; HET: ACO; 2.40A {Saccharomyces cerevisiae} SCOP: d.108.1.1 PDB: 1qso_A | Back alignment and structure |
|---|
Probab=99.30 E-value=5.9e-12 Score=112.20 Aligned_cols=127 Identities=14% Similarity=0.095 Sum_probs=89.7
Q ss_pred cccccccccCHHHHHHHHHHHHHcc---ccccCCHHHHHhcc-----CeEEEEE--ECCeEEEEEEEeeec----cCCce
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESG---ALVRRTDEELLKAL-----DSFYVVE--REGQIIACAALFPFF----KEKCG 514 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~---~~~~~~~e~l~~~i-----~~~~Va~--~dg~IVG~~~l~~~~----~~~~a 514 (585)
++||+++++|++.+.+++....... +..++..+.+...+ ..+++++ .+|++||++.+.+.. ..+.+
T Consensus 5 ~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~vG~~~~~~~~~~~~~~~~~ 84 (152)
T 1qsm_A 5 ITVRFVTENDKEGWQRLWKSYQDFYEVSFPDDLDDFNFGRFLDPNIKMWAAVAVESSSEKIIGMINFFNHMTTWDFKDKI 84 (152)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHCTTSCEEEEEEEESSSCCEEEEEEEEEECCTTCSSCEE
T ss_pred EEEEEcchhhHHHHHHHHHHHHHHHhccCcchhhHHHHHHHhcCCCceeEEEEEeCCCCeEEEEEEEEecCCccccccce
Confidence 5799999999999999976533221 11122233333332 2577888 899999999986431 34678
Q ss_pred EEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccce--ecccc-cccccCeeecCcccc
Q 007903 515 EVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFL--RGRTH-SYYRLKFNCSSKSFH 579 (585)
Q Consensus 515 eI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~--~~~a~-~YYrlGF~~~~~~~~ 579 (585)
+|..++|+|+|||+|+|++|+++++ +++++.|+....+... +..+. .|.++||+.....|.
T Consensus 85 ~i~~~~v~p~~rg~Gig~~ll~~~~----~~~~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~~~~ 148 (152)
T 1qsm_A 85 YINDLYVDENSRVKGAGGKLIQFVY----DEADKLGTPSVYWCTDESNHRAQLLYVKVGYKAPKILYK 148 (152)
T ss_dssp EEEEEEECGGGCSSSHHHHHHHHHH----HHHHHTTCCCEEEEEETTCHHHHHHHHHHEEECSEEEEE
T ss_pred EEEEEEechhcccCCHHHHHHHHHH----HHHHHcCCCeEEEEeeCCCHHHHHHHHHcCCCccceEEE
Confidence 9999999999999999999999999 8888888876533222 12233 455799997655544
|
| >1y7r_A Hypothetical protein SA2161; structural genomics, protein structure initiative, PSI, midwest center for structural genomics; 1.70A {Staphylococcus aureus} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.30 E-value=2.6e-11 Score=107.15 Aligned_cols=118 Identities=10% Similarity=0.074 Sum_probs=87.4
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHHhcc---CeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCC
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPEC 525 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i---~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~Pey 525 (585)
+.||. +++|++++.++.+.. +..+++.+.+...+ ..++++..++++||++.+.+ .....++|..++|+|+|
T Consensus 2 ~~i~~-~~~d~~~~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~-~~~~~~~i~~~~v~p~~ 75 (133)
T 1y7r_A 2 VKVTY-DIPTCEDYCALRINA----GMSPKTREAAEKGLPNALFTVTLYDKDRLIGMGRVIG-DGGTVFQIVDIAVLKSY 75 (133)
T ss_dssp CEEEC-SCCCHHHHHHHHHHT----TCCCCCHHHHHHHGGGCSEEEEEEETTEEEEEEEEEE-CSSSEEEEEEEEECGGG
T ss_pred eeEEe-cccCHHHHHHHHHhC----CCCCcCHHHHHhhCCcCceEEEEEECCEEEEEEEEEc-cCCCeEEEEEEEEcHHH
Confidence 35677 899999999995432 23346677776665 45568889999999998874 34567899999999999
Q ss_pred cCCcHHHHHHHHHHhhhHHHHHHcCCcccCccce-ecccc-cccccCeeecCc
Q 007903 526 RGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFL-RGRTH-SYYRLKFNCSSK 576 (585)
Q Consensus 526 RGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~-~~~a~-~YYrlGF~~~~~ 576 (585)
||+|+|++|+++++ +++++.++........ +..+. .|.++||+..+.
T Consensus 76 rg~Gig~~ll~~~~----~~~~~~g~~~~~~~~~~n~~a~~~y~k~Gf~~~~~ 124 (133)
T 1y7r_A 76 QGQAYGSLIMEHIM----KYIKNVSVESVYVSLIADYPADKLYVKFGFMPTEP 124 (133)
T ss_dssp CSSSHHHHHHHHHH----HHHHHHCCTTCEEEEEEETTHHHHHHTTTCEECTT
T ss_pred hcCchHHHHHHHHH----HHHHHcCCCEEEEEEeCCchHHHHHHHcCCeECCC
Confidence 99999999999999 8888888654322211 23333 455799998753
|
| >2cnt_A Modification of 30S ribosomal subunit protein S18; N-alpha acetylation, GCN5-N-acetyltransferase, ribosomal Pro acetyltransferase, GNAT; HET: COA; 2.4A {Salmonella typhimurium} PDB: 2cnm_A* 2cns_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=6.8e-12 Score=114.98 Aligned_cols=118 Identities=19% Similarity=0.140 Sum_probs=91.2
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHHhcc---CeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCC
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPEC 525 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i---~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~Pey 525 (585)
++||+++++|++.+.++... .+..+|+.+.+...+ ..+++++.+|++||++.+.+. .+.++|..++|+|+|
T Consensus 2 i~ir~~~~~D~~~i~~l~~~----~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~--~~~~~i~~~~v~p~~ 75 (160)
T 2cnt_A 2 NTISILSTTDLPAAWQIEQR----AHAFPWSEKTFFGNQGERYLNLKLTADDRMAAFAITQVV--LDEATLFNIAVDPDF 75 (160)
T ss_dssp EEEEECCGGGHHHHHHHHHH----HCSSCCCHHHHHHSCSTTBCCEEEEETTEEEEEEEEEEE--TTEEEEEEEEECGGG
T ss_pred eEEEeCCHHHHHHHHHHHHh----hcccCCCHHHHHHHhccCccEEEEEECCeEEEEEEEEec--CCceEEEEEEECHHH
Confidence 46899999999999999543 334567777777666 356788899999999998753 357899999999999
Q ss_pred cCCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee---cccccccccCeeecCc
Q 007903 526 RGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR---GRTHSYYRLKFNCSSK 576 (585)
Q Consensus 526 RGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~---~~a~~YYrlGF~~~~~ 576 (585)
||+|+|++|++.++ +++++.|+....+.... .....|.++||+..+.
T Consensus 76 rg~Gig~~ll~~~~----~~~~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~~~ 125 (160)
T 2cnt_A 76 QRRGLGRMLLEHLI----DELETRGVVTLWLEVRASNAAAIALYESLGFNEATI 125 (160)
T ss_dssp CSSSHHHHHHHHHH----HHHHHTTCCEEEEEEETTCHHHHHHHHHHTCEEEEE
T ss_pred cCCCHHHHHHHHHH----HHHHHcCCcEEEEEEecCCHHHHHHHHHCCCEEEEE
Confidence 99999999999999 88888888764333221 2233455799998754
|
| >2fia_A Acetyltransferase; structural genomics, PSI, protein structu initiative, midwest center for structural genomics, MCSG; 2.60A {Enterococcus faecalis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.29 E-value=1e-11 Score=111.90 Aligned_cols=123 Identities=13% Similarity=0.082 Sum_probs=90.2
Q ss_pred ccccccccCHHHHHHHHHHHHHc-------cc-cccCCHHHHHhcc--CeEEEEEECCeEEEEEEEeeeccCCceEEeeE
Q 007903 450 GTRTAKVTDLSGIKQIIQPLVES-------GA-LVRRTDEELLKAL--DSFYVVEREGQIIACAALFPFFKEKCGEVAAI 519 (585)
Q Consensus 450 ~IR~at~~D~~~I~~Li~~~~~~-------~~-~~~~~~e~l~~~i--~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L 519 (585)
.||+++++|++.+.+++...... .+ ....+.+.+...+ ..+++++.+|++||++.+.........++..+
T Consensus 2 ~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~i~~~ 81 (162)
T 2fia_A 2 KIRVADEKELPMILQFLTEVKAYMDVVGITQWTKDYPSQGDIQEDITKKRLYLLVHEEMIFSMATFCMEQEQDFVWLKRF 81 (162)
T ss_dssp CEEECCGGGTTHHHHHHHHHHHHHHHHTCCCCCSSSSCHHHHHHHHHTTCEEEEEETTEEEEEEEEEECTTCSEEEEEEE
T ss_pred cchhCCHhhHHHHHHHHHHHHHHHhccCcccCCCCCCCHHHHHHHHHhCcEEEEEECCEEEEEEEEeeCCCCCceEEEEE
Confidence 68999999999999997654331 11 1122355555544 56888889999999999985444456789999
Q ss_pred EEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee--cccc-cccccCeeecCc
Q 007903 520 GVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR--GRTH-SYYRLKFNCSSK 576 (585)
Q Consensus 520 ~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~--~~a~-~YYrlGF~~~~~ 576 (585)
+|+|+|||+|+|++|+++++ +++++.|+......... ..+. .|.++||+..+.
T Consensus 82 ~v~p~~rg~Gig~~ll~~~~----~~~~~~g~~~i~~~~~~~N~~a~~~y~k~Gf~~~~~ 137 (162)
T 2fia_A 82 ATSPNYIAKGYGSLLFHELE----KRAVWEGRRKMYAQTNHTNHRMIRFFESKGFTKIHE 137 (162)
T ss_dssp EECGGGTTTTHHHHHHHHHH----HHHHTTTCCEEEEEEETTCHHHHHHHHHTTCEEEEE
T ss_pred EEcccccCCCHHHHHHHHHH----HHHHHCCCCEEEEEecCCCHHHHHHHHHCCCEEEee
Confidence 99999999999999999999 88888888764332221 2333 455799998754
|
| >3d8p_A Acetyltransferase of GNAT family; NP_373092.1, structural GE joint center for structural genomics, JCSG, protein structu initiative; 2.20A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.29 E-value=1.4e-11 Score=111.24 Aligned_cols=123 Identities=12% Similarity=0.127 Sum_probs=91.6
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHH------HHHhcc----CeEEEEEECCe-EEEEEEEeeeccCCceEEe
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDE------ELLKAL----DSFYVVEREGQ-IIACAALFPFFKEKCGEVA 517 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e------~l~~~i----~~~~Va~~dg~-IVG~~~l~~~~~~~~aeI~ 517 (585)
.+||+++++|++.+.+++.......+..++... .+...+ ..++++..+++ +||++.+.. ..+..++|.
T Consensus 4 ~~ir~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~vG~~~~~~-~~~~~~~i~ 82 (163)
T 3d8p_A 4 INIIEYNRSYKEELIEFILSIQKNEFNIKIDRDDQPDLENIEHNYLNSGGQFWLAINNHQNIVGTIGLIR-LDNNMSALK 82 (163)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHTTSCCSCCGGGCGGGGCHHHHTTTTTCEEEEEECTTCCEEEEEEEEE-CSTTEEEEE
T ss_pred EEEEECCHHHHHHHHHHHHHHHHHhhCCCCccccchHHHHHHHHHhcCCceEEEEEeCCCeEEEEEEEEe-cCCCEEEEE
Confidence 579999999999999998776655543333321 233222 56788888888 999999874 345678999
Q ss_pred eEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee---cccccccccCeeecCc
Q 007903 518 AIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR---GRTHSYYRLKFNCSSK 576 (585)
Q Consensus 518 ~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~---~~a~~YYrlGF~~~~~ 576 (585)
.++|+|+|||+|+|++|+++++ +++++.|+......... .....|.++||+..+.
T Consensus 83 ~~~v~p~~rg~Gig~~ll~~~~----~~a~~~g~~~i~l~~~~~n~~a~~~y~k~GF~~~~~ 140 (163)
T 3d8p_A 83 KMFVDKGYRNLKIGKKLLDKVI----MTCKEQNIDGIYLGTIDKFISAQYFYSNNGFREIKR 140 (163)
T ss_dssp EEEECGGGTTTTHHHHHHHHHH----HHHHHTTCCEEEEEECTTCHHHHHHHHHTTCEEECG
T ss_pred EEEEChhhccCCHHHHHHHHHH----HHHHHCCCeEEEEEecCCCHHHHHHHHHCCCEEeee
Confidence 9999999999999999999999 88888888765332211 2234455899998865
|
| >2x7b_A N-acetyltransferase SSO0209; HET: COA; 1.95A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=99.29 E-value=5.3e-12 Score=116.98 Aligned_cols=120 Identities=18% Similarity=0.158 Sum_probs=87.0
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHHhcc----CeEEEEEECCeEEEEEEEeeecc----------CCce
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFFK----------EKCG 514 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i----~~~~Va~~dg~IVG~~~l~~~~~----------~~~a 514 (585)
..||+++++|++.+.++.... +..+++.+.+...+ ..++|++.++++||++.+....+ ...+
T Consensus 13 ~~iR~~~~~D~~~i~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~va~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~ 88 (168)
T 2x7b_A 13 FTLRNARMDDIDQIIKINRLT----LPENYPYYFFVEHLKEYGLAFFVAIVDNSVVGYIMPRIEWGFSNIKQLPSLVRKG 88 (168)
T ss_dssp CEEEECCGGGHHHHHHHHHHH----CSCCCCHHHHHHHHHHHGGGCEEEEETTEEEEEEEEEEEEEECSSCSSCCEEEEE
T ss_pred EEEEeCCHHHHHHHHHHHHHH----CCCCccHHHHHHHHhcCCceEEEEEECCeEEEEEEEEEeccccccccccCCCcEE
Confidence 579999999999999985432 22233444333322 45678888999999998874221 1367
Q ss_pred EEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHc-CCcccCccce--ecccc-cccccCeeecCc
Q 007903 515 EVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYD-HISTNGFPFL--RGRTH-SYYRLKFNCSSK 576 (585)
Q Consensus 515 eI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~-gi~~~g~~~~--~~~a~-~YYrlGF~~~~~ 576 (585)
+|..++|+|+|||+|||++||++++ +++++. |+....+... +..+. .|.++||+..+.
T Consensus 89 ~i~~l~V~p~~rg~GiG~~Ll~~~~----~~a~~~~g~~~i~l~v~~~N~~A~~~Yek~GF~~~~~ 150 (168)
T 2x7b_A 89 HVVSIAVLEEYRRKGIATTLLEASM----KSMKNDYNAEEIYLEVRVSNYPAIALYEKLNFKKVKV 150 (168)
T ss_dssp EEEEEEECGGGTTSSHHHHHHHHHH----HHHHHTTCCSEEEEEEETTCHHHHHHHHHTTCEEEEE
T ss_pred EEEEEEECHHHhccCHHHHHHHHHH----HHHHHhcCeeEEEEEEEeCCHHHHHHHHHCCCEEEEE
Confidence 8999999999999999999999999 889888 8876543322 22334 455799998754
|
| >1kux_A Aralkylamine, serotonin N-acetyltransferase; enzyme-inhibitor complex, bisubstrate analog, alternate conformations; HET: CA3; 1.80A {Ovis aries} SCOP: d.108.1.1 PDB: 1kuv_A* 1kuy_A* 1l0c_A* 1ib1_E* | Back alignment and structure |
|---|
Probab=99.29 E-value=7.1e-12 Score=119.27 Aligned_cols=124 Identities=17% Similarity=0.115 Sum_probs=92.7
Q ss_pred cccccccccCHHHHHHHHHHHHHcc-ccccCCHHHHHhcc----CeEEEEEECCeEEEEEEEeeec--------------
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESG-ALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFF-------------- 509 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~-~~~~~~~e~l~~~i----~~~~Va~~dg~IVG~~~l~~~~-------------- 509 (585)
..||+++++|++.+.++........ ...+++.+.+...+ ..+++++.+|++||++.+....
T Consensus 35 ~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~ 114 (207)
T 1kux_A 35 NEFRCLTPEDAAGVFEIEREAFISVSGNCPLNLDEVQHFLTLCPELSLGWFVEGRLVAFIIGSLWDEERLTQESLALHRP 114 (207)
T ss_dssp CEEECCCGGGHHHHHHHHHHHTHHHHSCCSCCHHHHHHHHHHCGGGEEEEEETTEEEEEEEEEEECSSSCCGGGGGCCCT
T ss_pred eEEecCCHHHHHHHHHHHHHHcCCcccccccCHHHHHHHHhhCCCeEEEEEECCEEEEEEEEEeecccccccccccccCC
Confidence 5799999999999999965433221 12356666665544 4688899999999999886432
Q ss_pred cCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHc-CCcccCccceecccccccccCeeecCc
Q 007903 510 KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYD-HISTNGFPFLRGRTHSYYRLKFNCSSK 576 (585)
Q Consensus 510 ~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~-gi~~~g~~~~~~~a~~YYrlGF~~~~~ 576 (585)
..+.++|..++|+|+|||+|||++|+++++ +++++. |+....+.........|.++||+..+.
T Consensus 115 ~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~----~~~~~~~g~~~i~l~~n~~a~~~y~k~GF~~~~~ 178 (207)
T 1kux_A 115 RGHSAHLHALAVHRSFRQQGKGSVLLWRYL----HHVGAQPAVRRAVLMCEDALVPFYQRFGFHPAGP 178 (207)
T ss_dssp TCCEEEEEEEEECGGGCSSSHHHHHHHHHH----HHHTTSTTCCEEEEEECGGGHHHHHTTTCEEEEE
T ss_pred CCCEEEEEEEEECHHHcCCCHHHHHHHHHH----HHHHhcCCceEEEEeecHHHHHHHHHCCCEECCc
Confidence 246789999999999999999999999999 888887 777654432222333455799998864
|
| >3fyn_A Integron gene cassette protein HFX_CASS3; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.45A {Uncultured bacterium} | Back alignment and structure |
|---|
Probab=99.29 E-value=1.1e-11 Score=114.70 Aligned_cols=126 Identities=17% Similarity=0.194 Sum_probs=90.0
Q ss_pred cccccccccccCHHHHHHHHHHHHHccccccCCHHHHHhc----c-----CeEEEEEECCeEEEEEEEeeec----cCCc
Q 007903 447 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKA----L-----DSFYVVEREGQIIACAALFPFF----KEKC 513 (585)
Q Consensus 447 ~~~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~----i-----~~~~Va~~dg~IVG~~~l~~~~----~~~~ 513 (585)
+...||+++++|++.+.+++........ .+++.+..... + ..+++++.+|++||++.+.... ....
T Consensus 22 m~~~ir~~~~~D~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~~ 100 (176)
T 3fyn_A 22 LSPQVRTAHIGDVPVLVRLMSEFYQEAG-FALPHDAAIRAFKALLGKPDLGRIWLIAEGTESVGYIVLTLGFSMEYGGLR 100 (176)
T ss_dssp SGGGEEECCGGGHHHHHHHHHHHHHHTT-CCCCHHHHHHHHHHHHHCGGGEEEEEEEETTEEEEEEEEEEEEETTTTEEE
T ss_pred ceEEEEECCHHHHHHHHHHHHHHHHhcC-CCcccHHHHHHHHHHHhCCCCcEEEEEEECCEEEEEEEEEeccccccCCce
Confidence 3478999999999999999776544321 23333332221 1 4678899999999999987422 2357
Q ss_pred eEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccce--ecccc-cccccCeeecCcc
Q 007903 514 GEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFL--RGRTH-SYYRLKFNCSSKS 577 (585)
Q Consensus 514 aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~--~~~a~-~YYrlGF~~~~~~ 577 (585)
++|..++|+|+|||+|||++|+++++ +++++.|+....+... +..+. .|.++||+..+..
T Consensus 101 ~~i~~~~V~p~~rg~Gig~~ll~~~~----~~a~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~~ 163 (176)
T 3fyn_A 101 GFVDDFFVRPNARGKGLGAAALQTVK----QGCCDLGVRALLVETGPEDHPARGVYSRAGFEESGRM 163 (176)
T ss_dssp EEEEEEEECGGGTTSSHHHHHHHHHH----HHHHHTTCCCEECCCC--------HHHHTTCCCCCCC
T ss_pred EEEEEEEEChhhcCCCHHHHHHHHHH----HHHHHCCCCEEEEEecCCCHHHHHHHHHCCCeeccce
Confidence 89999999999999999999999999 8888888876433222 12334 4557999988664
|
| >1i12_A Glucosamine-phosphate N-acetyltransferase; GNAT, alpha/beta; HET: ACO; 1.30A {Saccharomyces cerevisiae} SCOP: d.108.1.1 PDB: 1i1d_A* 1i21_A | Back alignment and structure |
|---|
Probab=99.29 E-value=7.4e-12 Score=115.19 Aligned_cols=125 Identities=19% Similarity=0.182 Sum_probs=85.6
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHHh-------cc------------CeEEEEE--ECCeEEEEEEEee
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLK-------AL------------DSFYVVE--REGQIIACAALFP 507 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~-------~i------------~~~~Va~--~dg~IVG~~~l~~ 507 (585)
..||+++++|++.+.+++... .....++.+.+.. .. ..++++. .+|++||++.+..
T Consensus 8 ~~IR~a~~~D~~~i~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ivG~~~~~~ 84 (160)
T 1i12_A 8 FYIRRMEEGDLEQVTETLKVL---TTVGTITPESFCKLIKYWNEATVWNDNEDKKIMQYNPMVIVDKRTETVAATGNIII 84 (160)
T ss_dssp EEEEECCGGGHHHHHHHHTTT---SCCCCCCHHHHHHHHHHHHHCBCCCC---CCCBSBCCEEEEETTTTEEEEEEEEEE
T ss_pred cEEecCCHHHHHHHHHHHHhc---ccCCCCCHHHHHHHHHHHHhccccccccccccccceEEEEEEccCCeEEEEEEEEe
Confidence 579999999999999874321 1111223332221 11 1134554 6799999988763
Q ss_pred ecc-----CCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceecccccccccCeeecCccccc
Q 007903 508 FFK-----EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYYRLKFNCSSKSFHI 580 (585)
Q Consensus 508 ~~~-----~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YYrlGF~~~~~~~~~ 580 (585)
... ...++|..++|+|+|||+|||++||++++ +++++.|+....+.........|.++||+..+..|.+
T Consensus 85 ~~~~~~~~~~~~~i~~~~V~~~~rg~Gig~~ll~~~~----~~a~~~g~~~i~l~~~~~n~~fY~k~GF~~~g~~~~~ 158 (160)
T 1i12_A 85 ERKIIHELGLCGHIEDIAVNSKYQGQGLGKLLIDQLV----TIGFDYGCYKIILDCDEKNVKFYEKCGFSNAGVEMQI 158 (160)
T ss_dssp EECSHHHHCEEEEEEEEEECGGGTTSSHHHHHHHHHH----HHHHHTTCSEEEEEECGGGHHHHHHTTCEEEEEEEEE
T ss_pred cccccccCCCceEEEEEEECHHHcCCCHHHHHHHHHH----HHHHHcCCcEEEEEcChhhHHHHHHCCCEEcCeeeee
Confidence 211 23578999999999999999999999999 8898889877544433334455668999988776653
|
| >3lod_A Putative acyl-COA N-acyltransferase; structural genomics, PSI2, MCSG, structure initiative; 2.50A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.29 E-value=1.4e-11 Score=111.64 Aligned_cols=123 Identities=20% Similarity=0.221 Sum_probs=85.5
Q ss_pred ccccccccccCHHHHHHHHHHHHHccc-cccC-CH-HHHHhcc----CeEEEEEE-CCeEEEEEEEeeeccCCceEEeeE
Q 007903 448 YEGTRTAKVTDLSGIKQIIQPLVESGA-LVRR-TD-EELLKAL----DSFYVVER-EGQIIACAALFPFFKEKCGEVAAI 519 (585)
Q Consensus 448 ~~~IR~at~~D~~~I~~Li~~~~~~~~-~~~~-~~-e~l~~~i----~~~~Va~~-dg~IVG~~~l~~~~~~~~aeI~~L 519 (585)
..+||+++++| +.+..++........ ..+. .. ......+ ..+++++. +|++||++.+.. .....++|..+
T Consensus 3 ~~~ir~~~~~D-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~vG~~~~~~-~~~~~~~i~~~ 80 (162)
T 3lod_A 3 MYTITDIAPTD-AEFIALIAALDAWQETLYPAESNHLLDLSQLPPQTVIALAIRSPQGEAVGCGAIVL-SEEGFGEMKRV 80 (162)
T ss_dssp CCEEEECCTTS-HHHHHHHHHHHHHTTCC---------GGGTSCGGGEEEEEEECSSCCEEEEEEEEE-CTTSEEEEEEE
T ss_pred ceEEEECCCCC-HHHHHHHHHHHHhccccCChhHhhhhhHHhCCCCCcEEEEEECCCCCEEEEEEEEE-cCCCeEEEEEE
Confidence 36799999999 777777664333221 1111 11 1111111 46788888 999999999985 35678999999
Q ss_pred EEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee--ccc-ccccccCeeecCc
Q 007903 520 GVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR--GRT-HSYYRLKFNCSSK 576 (585)
Q Consensus 520 ~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~--~~a-~~YYrlGF~~~~~ 576 (585)
+|+|+|||+|+|++|+++++ +++++.|+......... ..+ ..|.++||+..+.
T Consensus 81 ~v~p~~rg~Gig~~ll~~~~----~~~~~~g~~~i~l~~~~~n~~a~~~y~~~GF~~~~~ 136 (162)
T 3lod_A 81 YIDPQHRGQQLGEKLLAALE----AKARQRDCHTLRLETGIHQHAAIALYTRNGYQTRCA 136 (162)
T ss_dssp EECTTSCSSSHHHHHHHHHH----HHHHTTTCCEEEEEEETTCHHHHHHHHHTTCEEECC
T ss_pred EECHHHcCCCHHHHHHHHHH----HHHHHCCCcEEEEEecCCCHHHHHHHHHcCCEEccc
Confidence 99999999999999999999 88888888764332221 223 3455799998865
|
| >2eui_A Probable acetyltransferase; dimer, structural genomics, PSI, protein structure initiative; 2.80A {Pseudomonas aeruginosa PAO1} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.27 E-value=8.2e-12 Score=111.17 Aligned_cols=122 Identities=20% Similarity=0.178 Sum_probs=87.2
Q ss_pred ccccccccCHHHHHHHHHHHHHccccccCCHHH----HHhcc----CeEEEEEE--CCeEEEEEEEeeecc----CCceE
Q 007903 450 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEE----LLKAL----DSFYVVER--EGQIIACAALFPFFK----EKCGE 515 (585)
Q Consensus 450 ~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~----l~~~i----~~~~Va~~--dg~IVG~~~l~~~~~----~~~ae 515 (585)
.||+++++|++.+.+++...... +..+.+.+. +...+ ..+++++. +|++||++.+.+... .+.++
T Consensus 2 ~ir~~~~~D~~~i~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~vG~~~~~~~~~~~~~~~~~~ 80 (153)
T 2eui_A 2 RIVQATLEHLDLLAPLFVKYREF-YGMLSYPESSRKFLEKRLRRKESVIYLALADEEDRLLGFCQLYPSFSSLSLKRVWI 80 (153)
T ss_dssp EEEECCGGGHHHHHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHTCSEEEEEECSSSCCEEEEEEEEEEEETTTTEEEEE
T ss_pred eeEeCCHhhHHHHHHHHHHHHHH-hcCCCCHHHHHHHHHHHhcCCCCeEEEEEecCCCcEEEEEEEEecCCCCccCceEE
Confidence 68999999999999997653322 222223322 22222 46788888 999999999875322 35789
Q ss_pred EeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee---cccccccccCeeecCc
Q 007903 516 VAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR---GRTHSYYRLKFNCSSK 576 (585)
Q Consensus 516 I~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~---~~a~~YYrlGF~~~~~ 576 (585)
|..++|+|+|||+|+|++|+++++ +++++.|+......... ...+.|.++||+..+.
T Consensus 81 i~~~~v~p~~rg~Gig~~ll~~~~----~~~~~~g~~~i~~~~~~~N~~a~~~y~k~Gf~~~~~ 140 (153)
T 2eui_A 81 LNDIYVAEEARRQLVADHLLQHAK----QMARETHAVRMRVSTSVDNEVAQKVYESIGFREDQE 140 (153)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHH----HHHHHTTEEEEEEEEETTCHHHHHHHHTTTCBCCCS
T ss_pred EEEEEEcHHHhcCChHHHHHHHHH----HHHHHcCCCEEEEEEecCCHHHHHHHHHcCCEEecc
Confidence 999999999999999999999999 88888887764332221 2333455899998754
|
| >3fix_A N-acetyltransferase; termoplasma acidophilum, structural GEN PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 2.30A {Thermoplasma acidophilum} PDB: 3f0a_A* 3k9u_A* 3ne7_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=5.9e-12 Score=117.47 Aligned_cols=122 Identities=16% Similarity=0.140 Sum_probs=90.3
Q ss_pred cccccccccCHHHHHHHHHHHHHcccccc-------------CCHHHHHhcc----Ce----EEEEEECCeEEEEEEEee
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVR-------------RTDEELLKAL----DS----FYVVEREGQIIACAALFP 507 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~-------------~~~e~l~~~i----~~----~~Va~~dg~IVG~~~l~~ 507 (585)
..||+++++|++.+.++........+... ++.+.+...+ .. +++++.+|++||++.+..
T Consensus 27 i~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~ 106 (183)
T 3fix_A 27 IEIRKLSIEDLETLIEVARESWKWTYAGIYSEEYIESWIREKYSKEKLLNEIVRSQSNLDILFLGAFADSTLIGFIELKI 106 (183)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHTCHHHHHHHHHHHHTTSSEEEEEEEETTEEEEEEEEEE
T ss_pred EEEEeCCHhhHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHhcChHHHHHHHccccccccceEEEEEeCCEEEEEEEEEe
Confidence 67999999999999999766544322111 2233333322 33 889999999999999985
Q ss_pred eccCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccce--ecccc-cccccCeeecCc
Q 007903 508 FFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFL--RGRTH-SYYRLKFNCSSK 576 (585)
Q Consensus 508 ~~~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~--~~~a~-~YYrlGF~~~~~ 576 (585)
. ...++|..++|+|+|||+|||++|+++++ +++++.|+....+... +..+. .|.++||+..+.
T Consensus 107 ~--~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~----~~a~~~g~~~i~l~v~~~n~~a~~~y~k~GF~~~~~ 172 (183)
T 3fix_A 107 I--ANKAELLRLYLKPEYTHKKIGKTLLLEAE----KIMKKKGILECRLYVHRQNSVGFSFYYKNGFKVEDT 172 (183)
T ss_dssp E--TTEEEEEEEEECGGGCCHHHHHHHHHHHH----HHHHHHTCCEEEEEEETTCHHHHHHHHHTTCEEEEE
T ss_pred C--CCceEEEEEEECHHHcCCCHHHHHHHHHH----HHHHHcCCceEEEEEecCCHHHHHHHHHcCCEEecc
Confidence 3 57899999999999999999999999999 8888888876443322 12233 455799998754
|
| >2fe7_A Probable N-acetyltransferase; structural genomics, pseudomonas aerugi PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa ucbpp-pa14} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.27 E-value=1.7e-11 Score=111.13 Aligned_cols=125 Identities=21% Similarity=0.183 Sum_probs=90.1
Q ss_pred cccccccccCHHHHHHHHHHHHHccc---cccCCHHHHHhcc------CeEEEEEECCeEEEEEEEeeec----cCCceE
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGA---LVRRTDEELLKAL------DSFYVVEREGQIIACAALFPFF----KEKCGE 515 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~---~~~~~~e~l~~~i------~~~~Va~~dg~IVG~~~l~~~~----~~~~ae 515 (585)
.+||+++++|++.+.+++........ ..+++.+.+...+ ..+++++.+|++||++.+.+.. ....++
T Consensus 11 ~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~~~ 90 (166)
T 2fe7_A 11 LEIRPAVPADAEQILAFIIELADYERARHEVVTDVEGIRRSLFAEGSPTRALMCLSEGRPIGYAVFFYSYSTWLGRNGIY 90 (166)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHHTTCGGGCCCCHHHHHHHHTSTTCSEEEEEEEETTEEEEEEEEEEEEETTTTEEEEE
T ss_pred eEEEECCHHHHHHHHHHHHHHHHhhcccccCCccHHHHHHHhhcCCCCceEEEEEeCCeEEEEEEEEeccCCcccCCcEE
Confidence 67999999999999999776433221 2245566655543 4578889999999999987532 223589
Q ss_pred EeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee--cccc-cccccCeeecCcc
Q 007903 516 VAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR--GRTH-SYYRLKFNCSSKS 577 (585)
Q Consensus 516 I~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~--~~a~-~YYrlGF~~~~~~ 577 (585)
|..++|+|+|||+|+|++|+++++ +++++.|+....+.... ..+. .|.++||+..+..
T Consensus 91 i~~~~v~p~~rg~Gig~~ll~~~~----~~~~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~~ 151 (166)
T 2fe7_A 91 LEDLYVTPEYRGVGAGRRLLRELA----REAVANDCGRLEWSVLDWNQPAIDFYRSIGALPQDEW 151 (166)
T ss_dssp EEEEEECGGGCC--HHHHHHHHHH----HHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEECTTE
T ss_pred EEEEEECccccCccHHHHHHHHHH----HHHHHCCCCEEEEEEccCCHHHHHHHHHcCCeEcccE
Confidence 999999999999999999999999 88888888765332222 1333 4558999987653
|
| >3i9s_A Integron cassette protein; oyster POND, woods HOLE, acetyltransferase, structural genomics, PSI-2, protein structure initiative; 2.20A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.27 E-value=9.7e-12 Score=115.81 Aligned_cols=125 Identities=11% Similarity=0.044 Sum_probs=92.5
Q ss_pred cccccccccCHHHHHHHHHHHHHcccc-ccCCHHHHHhcc----------CeEEEEEECCeEEEEEEEeeecc----CCc
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGAL-VRRTDEELLKAL----------DSFYVVEREGQIIACAALFPFFK----EKC 513 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~-~~~~~e~l~~~i----------~~~~Va~~dg~IVG~~~l~~~~~----~~~ 513 (585)
.+||+++++|++.+.+++.......+. .+++.+.+...+ ..+++++.+|++||++.+..... ...
T Consensus 24 ~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~ivG~~~~~~~~~~~~~~~~ 103 (183)
T 3i9s_A 24 VEIKRVDKHHCLDLVGIFIELERYYFGDKAASEQDLANYLSHQVFSEHSGVKVIAAVEHDKVLGFATYTIMFPAPKLSGQ 103 (183)
T ss_dssp CEEEECCGGGGGGGHHHHHHHHHHHHGGGCCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEEEEEESCCGGGCEE
T ss_pred eEEEEcCHhHHHHHHHHHHHHHHHhccCccccHHHHHHHHHHhhhccCCCceEEEEEECCEEEEEEEEEEecCCCCCCCe
Confidence 689999999999999998765543332 234555544322 34788899999999999875321 357
Q ss_pred eEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee--cccc-cccccCeeecCcc
Q 007903 514 GEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR--GRTH-SYYRLKFNCSSKS 577 (585)
Q Consensus 514 aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~--~~a~-~YYrlGF~~~~~~ 577 (585)
++|..++|+|+|||+|||++|+++++ +++++.|+....+.... ..+. .|.++||+..+..
T Consensus 104 ~~i~~~~V~p~~rg~Gig~~ll~~~~----~~a~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~~ 166 (183)
T 3i9s_A 104 MYMKDLFVSSSARGKGIGLQLMKHLA----TIAITHNCQRLDWTAESTNPTAGKFYKSIGASLIREK 166 (183)
T ss_dssp EEEEEEEECGGGTTSCHHHHHHHHHH----HHHHHTTEEEEEEEEETTCHHHHHHHHHTTCEECTTE
T ss_pred EEEEeEEECHhhcCCCHHHHHHHHHH----HHHHHcCCCEEEEEEecCChHHHHHHHHcCCceeccc
Confidence 89999999999999999999999999 88988888765333222 2233 4557999988643
|
| >2i6c_A Putative acetyltransferase; GNAT family, structural genomic, structur genomics, PSI-2, protein structure initiative; HET: MSE EPE; 1.30A {Pseudomonas aeruginosa} SCOP: d.108.1.1 PDB: 3pgp_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=9.1e-12 Score=112.17 Aligned_cols=124 Identities=19% Similarity=0.204 Sum_probs=92.3
Q ss_pred cccccccccCHHHHHHHHHHHHHcc-----ccccCCHHHHHhcc---CeEEEEEECCeEEEEEEEeeeccCCceEEeeEE
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESG-----ALVRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIG 520 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~-----~~~~~~~e~l~~~i---~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~ 520 (585)
..||+++++|++.+.+++....... ...+++.+.+...+ ..++++..+|++||++.+.+......++|..++
T Consensus 3 ~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~i~~~~ 82 (160)
T 2i6c_A 3 LSHRPAETGDLETVAGFPQDRDELFYCYPKAIWPFSVAQLAAAIAERRGSTVAVHDGQVLGFANFYQWQHGDFCALGNMM 82 (160)
T ss_dssp CEEEECCGGGHHHHHTCCCSHHHHHHHCTTCCSSCCHHHHHHHHHHSEEEEEEEETTEEEEEEEEEEEETTTEEEEEEEE
T ss_pred eEeccCCHHHHHHHHHHHhhHHHHhccCccccCccCHHHHHHHhccCCceEEEEeCCeEEEEEEEEEEcCCCceEEEEEE
Confidence 4689999999999999976543211 12345666666554 456788899999999999865555679999999
Q ss_pred EccCCcCCcHHHHHHHHHHhhhHHHHHH-cCCcccCcccee--ccc-ccccccCeeecCc
Q 007903 521 VSPECRGQGQGDKLLGLCIWPLLSETRY-DHISTNGFPFLR--GRT-HSYYRLKFNCSSK 576 (585)
Q Consensus 521 V~PeyRGkGIGk~LL~~~~~~a~~~A~~-~gi~~~g~~~~~--~~a-~~YYrlGF~~~~~ 576 (585)
|+|+|||+|+|++|+++++ +++++ .|+....+.... ..+ +.|.++||+..+.
T Consensus 83 v~p~~rg~Gig~~l~~~~~----~~~~~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~ 138 (160)
T 2i6c_A 83 VAPAARGLGVARYLIGVME----NLAREQYKARLMKISCFNANAAGLLLYTQLGYQPRAI 138 (160)
T ss_dssp ECGGGTTTTHHHHHHHHHH----HHHHHHHCCSEEEEEEETTCHHHHHHHHHTTCEEEEE
T ss_pred ECHHHcCCCHHHHHHHHHH----HHHHhhCCccEEEEEEecCCHHHHHHHHHcCCEEccc
Confidence 9999999999999999999 88888 688764332211 222 3455799998763
|
| >2ob0_A Human MAK3 homolog; acetyltransferase, structural genomics consortium, SGC; HET: ACO; 1.80A {Homo sapiens} PDB: 2psw_A* 3tfy_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=1.4e-11 Score=112.82 Aligned_cols=120 Identities=13% Similarity=0.059 Sum_probs=89.9
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHHhcc---CeEEEEEECCeEEEEEEEeeecc--CCceEEeeEEEcc
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFK--EKCGEVAAIGVSP 523 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i---~~~~Va~~dg~IVG~~~l~~~~~--~~~aeI~~L~V~P 523 (585)
..||+++++|++.+.++... .+..+++.+.+...+ ..++++..++++||++.+..... ...++|..++|+|
T Consensus 7 ~~ir~~~~~D~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~~i~~~~v~p 82 (170)
T 2ob0_A 7 IELGDVTPHNIKQLKRLNQV----IFPVSYNDKFYKDVLEVGELAKLAYFNDIAVGAVCCRVDHSQNQKRLYIMTLGCLA 82 (170)
T ss_dssp EEEEECCTTTHHHHHHHHHH----HCSSCCCHHHHHHHTTSGGGEEEEEETTEEEEEEEEEEEEETTEEEEEEEEEEECG
T ss_pred EEEEECCHhhHHHHHHHHHH----HcccccCHHHHHHHhcCCCcEEEEEECCeEEEEEEEEEEecCCCcEEEEEEEEECH
Confidence 57999999999999999554 233445555555444 45788888999999999874332 2478999999999
Q ss_pred CCcCCcHHHHHHHHHHhhhHHHHHHc-CCcccCcccee---cccccccccCeeecCc
Q 007903 524 ECRGQGQGDKLLGLCIWPLLSETRYD-HISTNGFPFLR---GRTHSYYRLKFNCSSK 576 (585)
Q Consensus 524 eyRGkGIGk~LL~~~~~~a~~~A~~~-gi~~~g~~~~~---~~a~~YYrlGF~~~~~ 576 (585)
+|||+|+|++|+++++ +++++. |+......... .....|.++||+..+.
T Consensus 83 ~~rg~Gig~~ll~~~~----~~~~~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~ 135 (170)
T 2ob0_A 83 PYRRLGIGTKMLNHVL----NICEKDGTFDNIYLHVQISNESAIDFYRKFGFEIIET 135 (170)
T ss_dssp GGTTSSHHHHHHHHHH----HHHHHHCCCSEEEEEEETTCHHHHHHHHHTTCEEEEE
T ss_pred HHcCcCHHHHHHHHHH----HHHHhcCCccEEEEEEecCCHHHHHHHHHcCCEEeEe
Confidence 9999999999999999 888887 88764333222 2233455799998754
|
| >1xeb_A Hypothetical protein PA0115; midwest center for structural genomics, MCSG, structural GEN protein structure initiative, PSI, APC22065; 2.35A {Pseudomonas aeruginosa} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.27 E-value=1e-11 Score=112.14 Aligned_cols=126 Identities=15% Similarity=0.157 Sum_probs=88.1
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCC-HHHHHh-ccCeEEEEEECCeEEEEEEEeeecc-CCceEEeeEEEccCC
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRT-DEELLK-ALDSFYVVEREGQIIACAALFPFFK-EKCGEVAAIGVSPEC 525 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~-~e~l~~-~i~~~~Va~~dg~IVG~~~l~~~~~-~~~aeI~~L~V~Pey 525 (585)
..||+++++|++++.++...........+.. .+.... ....++++..++++||++.+.+... .+.++|..++|+|+|
T Consensus 8 ~~ir~~~~~d~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~i~~~~v~p~~ 87 (150)
T 1xeb_A 8 KHHADLTLKELYALLQLRTEVFVVEQKCPYQEVDGLDLVGDTHHLMAWRDGQLLAYLRLLDPVRHEGQVVIGRVVSSSAA 87 (150)
T ss_dssp EEGGGCCHHHHHHHHHHHHHHHTTTTTCCCCSCCSCTTSTTCEEEEEEETTEEEEEEEEECSTTTTTCEEEEEEEECGGG
T ss_pred eeehhCCHHHHHHHHHHHHHHhhcccCCChhhhhhhhccCCcEEEEEEECCEEEEEEEEEccCCCCCeEEEEEEEECHHH
Confidence 5689999999999999966543322211110 000001 1245677788999999999985322 156899999999999
Q ss_pred cCCcHHHHHHHHHHhhhHHHHHHc-CCcccCccceeccccc-ccccCeeecCcccc
Q 007903 526 RGQGQGDKLLGLCIWPLLSETRYD-HISTNGFPFLRGRTHS-YYRLKFNCSSKSFH 579 (585)
Q Consensus 526 RGkGIGk~LL~~~~~~a~~~A~~~-gi~~~g~~~~~~~a~~-YYrlGF~~~~~~~~ 579 (585)
||+|+|++|+++++ +++++. ++....+.. +..+.. |.++||+..+..+.
T Consensus 88 rg~Gig~~ll~~~~----~~~~~~~g~~~i~l~~-n~~a~~~y~~~Gf~~~~~~~~ 138 (150)
T 1xeb_A 88 RGQGLGHQLMERAL----QAAERLWLDTPVYLSA-QAHLQAYYGRYGFVAVTEVYL 138 (150)
T ss_dssp TTSSHHHHHHHHHH----HHHHHHHTTCCEEEEE-ESTTHHHHHTTTEEECSCCEE
T ss_pred ccCCHHHHHHHHHH----HHHHHhcCCCEEEEec-hhHHHHHHHHcCCEECCcccc
Confidence 99999999999999 888877 777654433 334444 55799998875543
|
| >2vez_A Putative glucosamine 6-phosphate acetyltransferase; acyltransferase; HET: ACO G6P; 1.45A {Aspergillus fumigatus} PDB: 2vxk_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=6.3e-12 Score=118.54 Aligned_cols=126 Identities=13% Similarity=0.086 Sum_probs=91.1
Q ss_pred cccccccccCHHH-HHHHHHHHHHccccccCCHHHHHhcc---------CeEEEEE-ECCeEEEEEEEeeec-----cCC
Q 007903 449 EGTRTAKVTDLSG-IKQIIQPLVESGALVRRTDEELLKAL---------DSFYVVE-REGQIIACAALFPFF-----KEK 512 (585)
Q Consensus 449 ~~IR~at~~D~~~-I~~Li~~~~~~~~~~~~~~e~l~~~i---------~~~~Va~-~dg~IVG~~~l~~~~-----~~~ 512 (585)
..||+++++|++. +.++++.... ..+++.+.+...+ ..++++. .+|++||++.+.... ...
T Consensus 48 ~~iR~~~~~D~~~~i~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~ 124 (190)
T 2vez_A 48 YTIRPLCRSDYKRGYLDVLRVLTT---VGDINEEQWNSRYEWIRARSDEYYLLVVCDGEGRIVGTGSLVVERKFIHSLGM 124 (190)
T ss_dssp CEEEECCGGGGGGTHHHHHTTTSC---CCCCCHHHHHHHHHHHHTTTTTEEEEEEECTTSCEEEEEEEEEEECSHHHHCE
T ss_pred eEEEeCCHHHHHHHHHHHHHHHhc---ccCCCHHHHHHHHHHHHhCCCCcEEEEEEcCCCcEEEEEEEEeccccccCCCc
Confidence 5799999999999 9999553321 1234554443321 2455666 479999999987521 346
Q ss_pred ceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceecccccccccCeeecCcccccc
Q 007903 513 CGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYYRLKFNCSSKSFHIS 581 (585)
Q Consensus 513 ~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YYrlGF~~~~~~~~~~ 581 (585)
.++|..++|+|+|||+|||++|+++++ +++++.|+....+.......+.|.++||+..+..+...
T Consensus 125 ~~~i~~~~V~p~~rg~Gig~~Ll~~~~----~~a~~~g~~~i~l~~~~~n~~~y~k~GF~~~~~~~~~~ 189 (190)
T 2vez_A 125 VGHIEDIAVEKGQQGKKLGLRIIQALD----YVAEKVGCYKTILDCSEANEGFYIKCGFKRAGLEMAHY 189 (190)
T ss_dssp EEEEEEEEECGGGTTSSHHHHHHHHHH----HHHHHHTCSEEECCCCGGGHHHHHHTTCCCCCCCCCCC
T ss_pred eEEEEEEEEchhhcCCCHHHHHHHHHH----HHHHHcCCeEEEEEeccchHHHHHHCCCeehHHhHhhc
Confidence 789999999999999999999999999 88888888765433333334556689999888766543
|
| >3fnc_A Protein LIN0611, putative acetyltransferase; GNAT, RIMI, structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.75A {Listeria innocua} SCOP: d.108.1.0 | Back alignment and structure |
|---|
Probab=99.26 E-value=1.5e-11 Score=111.18 Aligned_cols=121 Identities=19% Similarity=0.157 Sum_probs=87.2
Q ss_pred cccccccccCHHHHHHHHHHHHHcccccc-------------CCHHHHHhcc--CeEEEEEECCeEEEEEEEeeeccCCc
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVR-------------RTDEELLKAL--DSFYVVEREGQIIACAALFPFFKEKC 513 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~-------------~~~e~l~~~i--~~~~Va~~dg~IVG~~~l~~~~~~~~ 513 (585)
..||+++++|++.+.++........+... ++.+.+...+ ..+++++.+|++||++.+.+.. .+.
T Consensus 6 ~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~-~~~ 84 (163)
T 3fnc_A 6 FHIRKATNSDAEAIQHVATTSWHHTYQDLIPSDVQDDFLKRFYNVETLHNRISATPFAVLEQADKVIGFANFIELE-KGK 84 (163)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHHTTTTSCHHHHHHHHHHHSSHHHHHHHHHHSCEEEEEETTEEEEEEEEEEEE-TTE
T ss_pred EEEEeCCHHHHHHHHHHHHHHHHHhhhccCCHHHHHHHHHhcCCHHHHHHhccCCEEEEEEECCEEEEEEEEEeCC-CCc
Confidence 57999999999999999766443322111 2233333333 5688999999999999998543 678
Q ss_pred eEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccce--eccc-ccccccCeeecCc
Q 007903 514 GEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFL--RGRT-HSYYRLKFNCSSK 576 (585)
Q Consensus 514 aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~--~~~a-~~YYrlGF~~~~~ 576 (585)
++|..++|+|+|||+|+|++|+++++ ++++ ++....+... +..+ ..|.++||+..+.
T Consensus 85 ~~i~~~~v~p~~rg~Gig~~ll~~~~----~~~~--~~~~i~l~v~~~n~~a~~~y~k~Gf~~~~~ 144 (163)
T 3fnc_A 85 SELAAFYLLPEVTQRGLGTELLEVGM----TLFH--VPLPMFVNVEKGNETAIHFYKAKGFVQVEE 144 (163)
T ss_dssp EEEEEEEECGGGCSSSHHHHHHHHHH----HHTT--CCSSEEEEEETTCHHHHHHHHHTTCEEEEE
T ss_pred EEEEEEEECHHHhCCCHHHHHHHHHH----HHhc--cCCEEEEEEeCCCHHHHHHHHHcCCEEEEE
Confidence 99999999999999999999999999 7765 5554332222 1223 3455899998754
|
| >2o28_A Glucosamine 6-phosphate N-acetyltransferase; structural genomics, structural genomics consortium, SGC; HET: 16G COA; 1.80A {Homo sapiens} PDB: 2huz_A* 3cxq_A* 3cxs_A 3cxp_A | Back alignment and structure |
|---|
Probab=99.26 E-value=9e-12 Score=116.48 Aligned_cols=123 Identities=25% Similarity=0.279 Sum_probs=89.9
Q ss_pred cccccccccCHHH-HHHHHHHHHHccccccCCHHHHHhcc--------CeEEEEEE--CCeEEEEEEEeeec-----cCC
Q 007903 449 EGTRTAKVTDLSG-IKQIIQPLVESGALVRRTDEELLKAL--------DSFYVVER--EGQIIACAALFPFF-----KEK 512 (585)
Q Consensus 449 ~~IR~at~~D~~~-I~~Li~~~~~~~~~~~~~~e~l~~~i--------~~~~Va~~--dg~IVG~~~l~~~~-----~~~ 512 (585)
..||+++++|+++ +.+++..... ..+++.+.+...+ ..+++++. +|++||++.+.... ...
T Consensus 39 ~~iR~~~~~D~~~~i~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~ivG~~~~~~~~~~~~~~~~ 115 (184)
T 2o28_A 39 LVLRPLCTADLNRGFFKVLGQLTE---TGVVSPEQFMKSFEHMKKSGDYYVTVVEDVTLGQIVATATLIIEHKFIHSCAK 115 (184)
T ss_dssp EEEEECBGGGGGTTHHHHHTTTSC---CCCCCHHHHHHHHHHHHHHSCEEEEEEEETTTTEEEEEEEEEEEECSHHHHCE
T ss_pred eEEEECCHHHHHHHHHHHHHHHhh---cCCCCHHHHHHHHHHhhcCCCeEEEEEEeCCCCcEEEEEEEEeccccCCCCCC
Confidence 5799999999998 9888654322 2244555544332 24567777 89999999987432 135
Q ss_pred ceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceecccccccccCeeecCccc
Q 007903 513 CGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYYRLKFNCSSKSF 578 (585)
Q Consensus 513 ~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YYrlGF~~~~~~~ 578 (585)
.++|..++|+|+|||+|||++|+++++ +++++.|+....+.........|.++||+..+..+
T Consensus 116 ~~~i~~~~V~p~~rg~Gig~~Ll~~~~----~~a~~~g~~~i~l~~~~~n~~~y~k~GF~~~~~~~ 177 (184)
T 2o28_A 116 RGRVEDVVVSDECRGKQLGKLLLSTLT----LLSKKLNCYKITLECLPQNVGFYKKFGYTVSEENY 177 (184)
T ss_dssp EEEEEEEEECGGGTTSSHHHHHHHHHH----HHHHHTTEEEEEEEECGGGHHHHHTTTCEECSSEE
T ss_pred cEEEEEEEECHHHcCCCHHHHHHHHHH----HHHHHCCCCEEEEEecHHHHHHHHHCCCeeecccc
Confidence 789999999999999999999999999 88888888765433323334456689999887654
|
| >2fiw_A GCN5-related N-acetyltransferase:aminotransferase II; alpha-beta-alpha sandwich, GCN4-related acetyltransferase, S genomics, PSI; HET: ACO; 2.35A {Rhodopseudomonas palustris} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.26 E-value=2.4e-11 Score=111.22 Aligned_cols=118 Identities=12% Similarity=0.084 Sum_probs=87.5
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHH-------------HHHhcc--CeEEEEEECCeEEEEEEEeeeccCCc
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDE-------------ELLKAL--DSFYVVEREGQIIACAALFPFFKEKC 513 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e-------------~l~~~i--~~~~Va~~dg~IVG~~~l~~~~~~~~ 513 (585)
..||+++++|++.+.+++............+.+ .+...+ ..+++++.+|++||++.+. ..
T Consensus 8 ~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~-----~~ 82 (172)
T 2fiw_A 8 PALRPYLPEDAAVTAAIFVASIEQLTADDYSEEQQEAWASAADDEAKFAARLSGQLTLIATLQGVPVGFASLK-----GP 82 (172)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHHHCTTTSCHHHHHHHHGGGSSHHHHHHHHHTSEEEEEEETTEEEEEEEEE-----TT
T ss_pred cEEEECchhhHHHHHHHHHHHHHHhccccCCHHHHHHHHhhccCHHHHHHHhcCCeEEEEEECCEEEEEEEEe-----cC
Confidence 579999999999999998765443222222222 222222 5688889999999999987 25
Q ss_pred eEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceecccc-cccccCeeecCc
Q 007903 514 GEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTH-SYYRLKFNCSSK 576 (585)
Q Consensus 514 aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~-~YYrlGF~~~~~ 576 (585)
++|..++|+|+|||+|+|++|+++++ +++++.++....... +..+. .|.++||+..+.
T Consensus 83 ~~i~~~~v~p~~rg~Gig~~ll~~~~----~~~~~~g~~~i~~~~-n~~a~~~y~k~GF~~~~~ 141 (172)
T 2fiw_A 83 DHIDMLYVHPDYVGRDVGTTLIDALE----KLAGARGALILTVDA-SDNAAEFFAKRGYVAKQR 141 (172)
T ss_dssp TEEEEEEECGGGCSSSHHHHHHHHHH----HHHHTTTCSEEEEEE-CTTTHHHHHTTTCEEEEE
T ss_pred cEEEEEEECccccCcCHHHHHHHHHH----HHHHhcCCcEEEEEe-CHHHHHHHHHcCCEEecc
Confidence 68999999999999999999999999 888888887654433 33444 455799998754
|
| >1wwz_A Hypothetical protein PH1933; structural genomics, pyrococcus horikoshii OT3, riken struct genomics/proteomics initiative, RSGI; HET: ACO; 1.75A {Pyrococcus horikoshii} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.25 E-value=7.2e-12 Score=115.14 Aligned_cols=123 Identities=18% Similarity=0.185 Sum_probs=83.1
Q ss_pred cccccccccCHHHHHHHHHHHHHccccc-cCCHHH---HHh-----ccCeEEEEEECCeEEEEEEEeeec-----cCCce
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALV-RRTDEE---LLK-----ALDSFYVVEREGQIIACAALFPFF-----KEKCG 514 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~-~~~~e~---l~~-----~i~~~~Va~~dg~IVG~~~l~~~~-----~~~~a 514 (585)
+.||+++++|++.+.+++.......... ..+.+. +.. .-..++|++.+|++||++.+.+.. ....+
T Consensus 7 ~~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ivG~~~~~~~~~~~~~~~~~~ 86 (159)
T 1wwz_A 7 EKLKKLDKKALNELIDVYMSGYEGLEEYGGEGRDYARNYIKWCWKKASDGFFVAKVGDKIVGFIVCDKDWFSKYEGRIVG 86 (159)
T ss_dssp EECCCCCHHHHHHHHHHHHHHTTTCHHHHCSHHHHHHHHHHHHHHHHGGGEEEEEETTEEEEEEEEEEEEEETTTTEEEE
T ss_pred hhhhhCCHhHHHHHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHhCCCCcEEEEEECCEEEEEEEEeccccccccCCceE
Confidence 5799999999999999965422111000 011111 111 114578889999999999885321 12347
Q ss_pred EEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccce--eccccccc-ccCeeecCc
Q 007903 515 EVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFL--RGRTHSYY-RLKFNCSSK 576 (585)
Q Consensus 515 eI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~--~~~a~~YY-rlGF~~~~~ 576 (585)
+|..++|+|+|||+|||++||++++ +++++.+ ....+... +..+..|| ++||+..+.
T Consensus 87 ~i~~l~V~p~~rg~GiG~~Ll~~~~----~~~~~~g-~~i~l~v~~~N~~A~~fY~k~GF~~~~~ 146 (159)
T 1wwz_A 87 AIHEFVVDKKFQGKGIGRKLLITCL----DFLGKYN-DTIELWVGEKNYGAMNLYEKFGFKKVGK 146 (159)
T ss_dssp EEEEEEECGGGTTSSHHHHHHHHHH----HHHHTTC-SEEEEEEETTCHHHHHHHHHTTCEEEEE
T ss_pred EEEEEEECHHHcCCCHHHHHHHHHH----HHHHhcC-CEEEEEEeCCCHHHHHHHHHCCCEEccc
Confidence 8999999999999999999999999 8888888 65433322 22344444 799998754
|
| >3dr6_A YNCA; acetyltransferase, csgid target, essential gene, IDP00086, structural genomics, center for STRU genomics of infectious diseases; HET: MSE; 1.75A {Salmonella typhimurium} SCOP: d.108.1.1 PDB: 3dr8_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=3.4e-11 Score=109.27 Aligned_cols=124 Identities=20% Similarity=0.142 Sum_probs=91.8
Q ss_pred cccccccccCHHHHHHHHHHHHHccc----cccCCHHHHHhcc-------CeEEEEEECCeEEEEEEEeeecc---CCce
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGA----LVRRTDEELLKAL-------DSFYVVEREGQIIACAALFPFFK---EKCG 514 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~----~~~~~~e~l~~~i-------~~~~Va~~dg~IVG~~~l~~~~~---~~~a 514 (585)
+.||+++++|++.+.+++........ ..+++.+.+...+ ..+++++.+|++||++.+.+... .+..
T Consensus 4 ~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~~ 83 (174)
T 3dr6_A 4 MTIRFADKADCAAITEIYNHAVLHTAAIWNDRTVDTDNRLAWYEARQLLGYPVLVSEENGVVTGYASFGDWRSFDGFRYT 83 (174)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHSSTTTTCCCCCCHHHHHHHHHHHHHHTCCEEEEEETTEEEEEEEEEESSSSGGGTTE
T ss_pred eEEeeCChhhHHHHHHHHHHHHHhccccccCCCCCHHHHHHHHHhhcccCceEEEEecCCeEEEEEEEeecCCCCCcceE
Confidence 57999999999999999877654432 1234555554433 46788899999999999875332 2357
Q ss_pred EEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee--cccc-cccccCeeecCc
Q 007903 515 EVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR--GRTH-SYYRLKFNCSSK 576 (585)
Q Consensus 515 eI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~--~~a~-~YYrlGF~~~~~ 576 (585)
.+..++|+|+|||+|+|++|+++++ +++++.|+......... ..+. .|.++||+..+.
T Consensus 84 ~~~~~~v~p~~rg~Gig~~ll~~~~----~~~~~~g~~~i~~~~~~~n~~a~~~y~k~Gf~~~~~ 144 (174)
T 3dr6_A 84 VEHSVYVHPAHQGKGLGRKLLSRLI----DEARRCGKHVMVAGIESQNAASIRLHHSLGFTVTAQ 144 (174)
T ss_dssp EEEEEEECGGGTTSSHHHHHHHHHH----HHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEEEEE
T ss_pred EEEEEEECHHHccCCHHHHHHHHHH----HHHHHcCCCEEEEEeecCCHHHHHHHHhCCCEEEEE
Confidence 8889999999999999999999999 88888888764332221 2233 455799998754
|
| >1ghe_A Acetyltransferase; acyl coenzyme A complex; HET: ACO; 1.55A {Pseudomonas syringae PV} SCOP: d.108.1.1 PDB: 1j4j_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=3.7e-11 Score=109.78 Aligned_cols=124 Identities=17% Similarity=0.163 Sum_probs=90.5
Q ss_pred cccccccccC----HHHHHHHHHHHHHcc----ccccCCHHHHHhcc-----------CeEEEEEECCeEEEEEEEeeec
Q 007903 449 EGTRTAKVTD----LSGIKQIIQPLVESG----ALVRRTDEELLKAL-----------DSFYVVEREGQIIACAALFPFF 509 (585)
Q Consensus 449 ~~IR~at~~D----~~~I~~Li~~~~~~~----~~~~~~~e~l~~~i-----------~~~~Va~~dg~IVG~~~l~~~~ 509 (585)
..||+++++| ++.+.+++....... +..+++.+.....+ ..+++++.+|++||++.+....
T Consensus 4 ~~ir~~~~~D~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~ 83 (177)
T 1ghe_A 4 AQLRRVTAESFAHYRHGLAQLLFETVHGGASVGFMADLDMQQAYAWCDGLKADIAAGSLLLWVVAEDDNVLASAQLSLCQ 83 (177)
T ss_dssp CEEEECCTTTHHHHHHHHHHHHHHHHHTTCCSSCCTTCCHHHHHHHHHTTHHHHHHTSEEEEEEEETTEEEEEEEEEECC
T ss_pred eEEEeCChHHhHhHHHHHHHHHHHHhhccCcccccCCCCHHHHHHHHHHHHHhhcCCceEEEEEecCCEEEEEEEEEecc
Confidence 5799999999 899999977665442 23344444332211 3578888999999999998543
Q ss_pred ---cCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccce--ecccccccccCeeecCc
Q 007903 510 ---KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFL--RGRTHSYYRLKFNCSSK 576 (585)
Q Consensus 510 ---~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~--~~~a~~YYrlGF~~~~~ 576 (585)
....++|..++|+|+|||+|+|++|+++++ +++++.|+........ +.....|.++||+..+.
T Consensus 84 ~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~----~~~~~~g~~~i~l~~~~~n~a~~~y~k~Gf~~~~~ 151 (177)
T 1ghe_A 84 KPNGLNRAEVQKLMVLPSARGRGLGRQLMDEVE----QVAVKHKRGLLHLDTEAGSVAEAFYSALAYTRVGE 151 (177)
T ss_dssp STTCTTEEEEEEEEECGGGTTSSHHHHHHHHHH----HHHHHTTCCEEEEEEETTSHHHHHHHHTTCEEEEE
T ss_pred CCCCcceEEEEEEEECHHHcCCCHHHHHHHHHH----HHHHHcCCCEEEEEeccCCHHHHHHHHcCCEEccc
Confidence 234799999999999999999999999999 8888888876433221 12333455799998754
|
| >3jvn_A Acetyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.61A {Vibrio fischeri} | Back alignment and structure |
|---|
Probab=99.25 E-value=2.7e-11 Score=110.11 Aligned_cols=125 Identities=15% Similarity=0.083 Sum_probs=75.4
Q ss_pred cccccccCHHHHHHHHHHHHHccc------cccCC-------HHH-HHhccCeEEEEEECCeEEEEEEEeeec-------
Q 007903 451 TRTAKVTDLSGIKQIIQPLVESGA------LVRRT-------DEE-LLKALDSFYVVEREGQIIACAALFPFF------- 509 (585)
Q Consensus 451 IR~at~~D~~~I~~Li~~~~~~~~------~~~~~-------~e~-l~~~i~~~~Va~~dg~IVG~~~l~~~~------- 509 (585)
||+++++|++.+.+++........ ..... ... +...-..+++++.+|++||++.+....
T Consensus 5 ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~ 84 (166)
T 3jvn_A 5 IRRAKEIDLYCLNSLMYKLHDEHHQQCPDLFKTASEIEEEKSIARYLDDPECMVYVAEMDDVIIGFITGHFCELISTVSK 84 (166)
T ss_dssp EEECCGGGHHHHHHHHHHHHHHHHHHSCC----------CCCHHHHHHCTTEEEEEEESSSSEEEEEEEEEEEECCSSSC
T ss_pred hhcCCHHHHHHHHHHHHHHHHHHhhcCchhhcchhhHHHHHHHHHHhcCCCcEEEEEEECCEEEEEEEEEeecccccccc
Confidence 899999999999999866543211 00000 011 111113578889999999999986321
Q ss_pred cCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccce--ecccc-cccccCeeecCcccc
Q 007903 510 KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFL--RGRTH-SYYRLKFNCSSKSFH 579 (585)
Q Consensus 510 ~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~--~~~a~-~YYrlGF~~~~~~~~ 579 (585)
....++|..++|+|+|||+|||++|+++++ +++++.|+........ +..+. .|.++||+..+.-+.
T Consensus 85 ~~~~~~i~~l~V~p~~rg~Gig~~ll~~~~----~~a~~~g~~~i~l~v~~~n~~a~~~y~k~GF~~~~~~~~ 153 (166)
T 3jvn_A 85 LVMMATIDELYIEKEYRREGVAEQLMMRIE----QELKDYGVKEIFVEVWDFNKGALEFYNKQGLNEHIHYLR 153 (166)
T ss_dssp CEEEEEEEEEEECTTTCSSSHHHHHHHHHH----HHHHTTTCSEEEECCC--CCBC-----------------
T ss_pred CccEEEEEEEEECHHHhccCHHHHHHHHHH----HHHHHcCCCEEEEEEecCCHHHHHHHHHcCCeEHHHHHh
Confidence 124678999999999999999999999999 8888888876433221 22334 455899998865443
|
| >1bo4_A Protein (serratia marcescens aminoglycoside-3-N- acetyltransferase); eubacterial aminoglyco resistance, GCN5-related N-acetyltransferase; HET: SPD COA; 2.30A {Serratia marcescens} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.24 E-value=4.8e-11 Score=108.50 Aligned_cols=123 Identities=12% Similarity=-0.002 Sum_probs=81.7
Q ss_pred cccccccccCHHHHHHHHHHHHHccc------cccCCHHHHHhcc----CeEEEEEECCeEEEEEEEeeec----cCCce
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGA------LVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFF----KEKCG 514 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~------~~~~~~e~l~~~i----~~~~Va~~dg~IVG~~~l~~~~----~~~~a 514 (585)
.+||+++++|++.+.+++........ ......+.+...+ ..+++++.+|++||++.+.... ..+.+
T Consensus 27 ~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~~ 106 (168)
T 1bo4_A 27 IRTCRLGPDQVKSMRAALDLFGREFGDVATYSQHQPDSDYLGNLLRSKTFIALAAFDQEAVVGALAAYVLPKFEQPRSEI 106 (168)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHHHTTCHHHHHSSCCCHHHHHHHHHSSSEEEEEEEETTEEEEEEEEEEEECSSSSCEEE
T ss_pred heeeeCCHhHHHHHHHHHHHHHHhhcCccccccccchHHHHHHHhcCCCeEEEEEEECCeEEEEEEEEeccCccCCCceE
Confidence 45999999999999999763322111 0112333333322 3577888999999999987532 13578
Q ss_pred EEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccce--eccc-ccccccCeeecC
Q 007903 515 EVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFL--RGRT-HSYYRLKFNCSS 575 (585)
Q Consensus 515 eI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~--~~~a-~~YYrlGF~~~~ 575 (585)
+|..++|+|+|||+|+|++|+++++ +++++.|+........ +..+ ..|.++||+..+
T Consensus 107 ~i~~~~v~p~~rg~Gig~~ll~~~~----~~a~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~g 166 (168)
T 1bo4_A 107 YIYDLAVSGEHRRQGIATALINLLK----HEANALGAYVIYVQADYGDDPAVALYTKLGIREEV 166 (168)
T ss_dssp EEEEEEECTTSTTSSHHHHHHHHHH----HHHHHHTCCEEEEECCCSCCSSEEEEEEC------
T ss_pred EEEEEEECHHHhcCCHHHHHHHHHH----HHHHhCCCCEEEEEecCCChHHHHHHHHcCCeecc
Confidence 9999999999999999999999999 8888888876433221 1233 445589998654
|
| >1q2y_A Protein YJCF, similar to hypothetical proteins; GCN5-related N-acetyltransferase superfamily fold, NYSGXRC, PSI, protein structure initiative; 2.00A {Bacillus subtilis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.24 E-value=1.5e-11 Score=110.01 Aligned_cols=119 Identities=13% Similarity=0.066 Sum_probs=86.3
Q ss_pred cccc-ccccCHHHHHHHHHHHHHccccccCC--HHHHHhccCeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCCc
Q 007903 450 GTRT-AKVTDLSGIKQIIQPLVESGALVRRT--DEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECR 526 (585)
Q Consensus 450 ~IR~-at~~D~~~I~~Li~~~~~~~~~~~~~--~e~l~~~i~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyR 526 (585)
+||. ++++|++++.+|.+.........++. .+.+. .-..++++..+|++||++.+.+ .++.++|..++|+|+||
T Consensus 2 ~i~~~~~~~d~~~i~~l~~~~f~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~vG~~~~~~--~~~~~~i~~~~v~~~~r 78 (140)
T 1q2y_A 2 KAVIAKNEEQLKDAFYVREEVFVKEQNVPAEEEIDELE-NESEHIVVYDGEKPVGAGRWRM--KDGYGKLERICVLKSHR 78 (140)
T ss_dssp EEEEECSHHHHHHHHHHHHHHHTTTSCCCTTTTCCTTG-GGSEEEEEEETTEEEEEEEEEE--ETTEEEEEEEECCGGGT
T ss_pred ceEEecChHHHHHHHHHHHHHhccccCCChHHHHhhcc-CCcEEEEEEECCeEEEEEEEEE--cCCcEEEEEEEEcHHHh
Confidence 3554 58899999999977654433211111 11111 1256788889999999999885 45688999999999999
Q ss_pred CCcHHHHHHHHHHhhhHHHHHHcCCcccCccceeccccc-ccccCeeecCc
Q 007903 527 GQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHS-YYRLKFNCSSK 576 (585)
Q Consensus 527 GkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~-YYrlGF~~~~~ 576 (585)
|+|+|++|+++++ +++++.++....+.. +..+.. |.++||+..+.
T Consensus 79 g~Gig~~ll~~~~----~~~~~~g~~~i~l~~-n~~~~~~y~~~Gf~~~~~ 124 (140)
T 1q2y_A 79 SAGVGGIIMKALE----KAAADGGASGFILNA-QTQAVPFYKKHGYRVLSE 124 (140)
T ss_dssp TTTHHHHHHHHHH----HHHHHTTCCSEEEEE-EGGGHHHHHHTTCEESCS
T ss_pred ccCHHHHHHHHHH----HHHHHCCCcEEEEEe-cHHHHHHHHHCCCEEecc
Confidence 9999999999999 888888887654433 334444 45799999877
|
| >2q7b_A Acetyltransferase, GNAT family; NP_689019.1, structural GEN joint center for structural genomics, JCSG; HET: MSE FLC; 2.00A {Streptococcus agalactiae 2603V} | Back alignment and structure |
|---|
Probab=99.24 E-value=3.1e-11 Score=112.95 Aligned_cols=126 Identities=13% Similarity=0.117 Sum_probs=92.9
Q ss_pred ccccccccc--ccCHHHHHHHHHHHHHccccccCCH------HHHHhcc----CeEEEEEECCeEEEEEEEeeeccCCce
Q 007903 447 LYEGTRTAK--VTDLSGIKQIIQPLVESGALVRRTD------EELLKAL----DSFYVVEREGQIIACAALFPFFKEKCG 514 (585)
Q Consensus 447 ~~~~IR~at--~~D~~~I~~Li~~~~~~~~~~~~~~------e~l~~~i----~~~~Va~~dg~IVG~~~l~~~~~~~~a 514 (585)
..++||+++ ++|++.+.+++.......+..++.. +.+...+ ..+++++.+|++||++.+.. .....+
T Consensus 18 ~~~~iR~~~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~ivG~~~~~~-~~~~~~ 96 (181)
T 2q7b_A 18 QGMEIKEYENNPYHLAQLVDLINYCQNIEAKLDIKMAEQDDIFQIENYYQNRKGQFWIALENEKVVGSIALLR-IDDKTA 96 (181)
T ss_dssp TTEEEEECCCCHHHHHHHHHHHHHHHHTTSCCCCCGGGGGGGGCHHHHTGGGTCEEEEEEETTEEEEEEEEEE-CSSSEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHhhcCCCccccchHHHHHHHHHHhCCCcEEEEEEECCEEEEEEEEEE-cCCCEE
Confidence 446899999 9999999999876655443322221 1122222 56888899999999999984 345678
Q ss_pred EEeeEEEccCCcC--CcHHHHHHHHHHhhhHHHHHHcCCcccCcccee--c-ccccccccCeeecCcc
Q 007903 515 EVAAIGVSPECRG--QGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR--G-RTHSYYRLKFNCSSKS 577 (585)
Q Consensus 515 eI~~L~V~PeyRG--kGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~--~-~a~~YYrlGF~~~~~~ 577 (585)
+|..++|+|+||| +|+|++|+++++ +++++.|+....+.... . ....|.++||+..+..
T Consensus 97 ~i~~~~V~p~~rg~~~Gig~~ll~~~~----~~a~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~~ 160 (181)
T 2q7b_A 97 VLKKFFTYPKYRGNPVRLGRKLFERFM----LFARASKFTRIVLDTPEKEKRSHFFYENQGFKQITRD 160 (181)
T ss_dssp EEEEEEECGGGSSTTTCHHHHHHHHHH----HHHHHTTCCEEEEEEETTCHHHHHHHHTTTCEEECTT
T ss_pred EEEEEEEChhhcCccccHHHHHHHHHH----HHHHHCCCcEEEEEecCCCHHHHHHHHHCCCEEeeee
Confidence 9999999999999 999999999999 88888888765433222 1 2334558999988653
|
| >1s3z_A Aminoglycoside 6'-N-acetyltransferase; GNAT, aminoglycoside ribostamycin; HET: COA RIO; 2.00A {Salmonella enteritidis} SCOP: d.108.1.1 PDB: 1s5k_A* 1s60_A* 2vbq_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=2.1e-11 Score=111.37 Aligned_cols=124 Identities=13% Similarity=-0.006 Sum_probs=88.4
Q ss_pred ccccccccccCHHHHHHHHHHHHHccccccCCHHHHHhcc----CeEEEEEECCeEEEEEEEeee-------ccCCceEE
Q 007903 448 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPF-------FKEKCGEV 516 (585)
Q Consensus 448 ~~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i----~~~~Va~~dg~IVG~~~l~~~-------~~~~~aeI 516 (585)
.+.||+++++|++.+.+++.......... ...+.+...+ ..+++++.+|++||++.+... .....++|
T Consensus 20 ~~~ir~~~~~D~~~i~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~i 98 (165)
T 1s3z_A 20 HMDIRQMNKTHLEHWRGLRKQLWPGHPDD-AHLADGEEILQADHLASFIAMADGVAIGFADASIRHDYVNGCDSSPVVFL 98 (165)
T ss_dssp CEEEEECCGGGHHHHHHHHHHHSTTSCHH-HHHHHHHHHHHCSSEEEEEEEETTEEEEEEEEEEECSCCTTCSSSSEEEE
T ss_pred eEEEEeCchhhHHHHHHHHHHHhccCCcH-HHHHHHHHHhcCCCceEEEEEECCEEEEEEEEEecccccccccCCCcEEE
Confidence 36899999999999999966543221110 0012233222 457888999999999998751 12467899
Q ss_pred eeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee--ccc-ccccccCeeecCc
Q 007903 517 AAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR--GRT-HSYYRLKFNCSSK 576 (585)
Q Consensus 517 ~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~--~~a-~~YYrlGF~~~~~ 576 (585)
..++|+|+|||+|||++|+++++ +++++.|+....+.... ..+ ..|.++||+..+.
T Consensus 99 ~~~~V~p~~rg~Gig~~ll~~~~----~~~~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~ 157 (165)
T 1s3z_A 99 EGIFVLPSFRQRGVAKQLIAAVQ----RWGTNKGCREMASDTSPENTISQKVHQALGFEETER 157 (165)
T ss_dssp EEEEECGGGCSSSHHHHHHHHHH----HHHHHTTCSEEEEEECTTCHHHHHHHHHTTCEEEEE
T ss_pred EEEEEChhhcCCcHHHHHHHHHH----HHHHHCCCCEEEEecCcCCHHHHHHHHHcCCeEeee
Confidence 99999999999999999999999 88888888765433222 123 3455799998754
|
| >1n71_A AAC(6')-II; aminoglycoside 6'-N-acetyltransferase, antibiotic resistance, coenzyme A; HET: COA; 1.80A {Enterococcus faecium} SCOP: d.108.1.1 PDB: 2a4n_A* 1b87_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=6e-11 Score=111.08 Aligned_cols=101 Identities=12% Similarity=-0.002 Sum_probs=73.2
Q ss_pred ccccccccCHHHHHHHHHHHHHccccccC---CHHHHHhcc---CeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEcc
Q 007903 450 GTRTAKVTDLSGIKQIIQPLVESGALVRR---TDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSP 523 (585)
Q Consensus 450 ~IR~at~~D~~~I~~Li~~~~~~~~~~~~---~~e~l~~~i---~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~P 523 (585)
.||+++++|.+.+.++..-. ...+...+ ..+.+...+ ..++++.++|++||++.+.+......++|..++|+|
T Consensus 2 ~ir~~~~~D~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~i~~l~V~p 80 (180)
T 1n71_A 2 IISEFDRNNPVLKDQLSDLL-RLTWPEEYGDSSAEEVEEMMNPERIAVAAVDQDELVGFIGAIPQYGITGWELHPLVVES 80 (180)
T ss_dssp EEEECCTTCHHHHHHHHHHH-HHHCTTTSSSTHHHHHHHHTCTTSEEEEEEETTEEEEEEEEEEEETTTEEEEEEEEECT
T ss_pred EEEECCccCHHHHHHHHHHH-HHhcccccchhHHHHHHHHhCCCcEEEEEecCCeEEEEEEEeccCCCceEEEEEEEEcc
Confidence 68999999997666664322 22222222 234444444 344444557999999999864456788999999999
Q ss_pred CCcCCcHHHHHHHHHHhhhHHHHHHcCCcccC
Q 007903 524 ECRGQGQGDKLLGLCIWPLLSETRYDHISTNG 555 (585)
Q Consensus 524 eyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g 555 (585)
+|||+|||++|+++++ +++++.++....
T Consensus 81 ~~rg~GiG~~ll~~~~----~~~~~~g~~~i~ 108 (180)
T 1n71_A 81 SRRKNQIGTRLVNYLE----KEVASRGGITIY 108 (180)
T ss_dssp TSCSSSHHHHHHHHHH----HHHHHTTCCEEE
T ss_pred ccccCCHHHHHHHHHH----HHHHHCCCcEEE
Confidence 9999999999999999 888888887643
|
| >2jdc_A Glyphosate N-acetyltransferase; GNAT; HET: CAO; 1.6A {Bacillus licheniformis} SCOP: d.108.1.1 PDB: 2bsw_A* 2jdd_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=3e-11 Score=108.77 Aligned_cols=121 Identities=12% Similarity=0.044 Sum_probs=84.2
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHH-h--ccCeEEEEEECCeEEEEEEEeeecc-----CCceEEeeEE
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELL-K--ALDSFYVVEREGQIIACAALFPFFK-----EKCGEVAAIG 520 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~-~--~i~~~~Va~~dg~IVG~~~l~~~~~-----~~~aeI~~L~ 520 (585)
++||+++++|+..|.+.... ..... ....+. . ....+++++.+|++||++.+..... .+.++|..++
T Consensus 2 ~~ir~~~~~D~~~l~~~~~~---~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~~~~i~~~~ 76 (146)
T 2jdc_A 2 IEVKPINAEDTYELRHRILR---PNQPI--EACMFESDLLRGAFHLGGYYGGKLISIASFHQAEHSELQGQKQYQLRGMA 76 (146)
T ss_dssp CEEEEECGGGGHHHHHHHTC---TTSCG--GGGSCGGGGSTTCEEEEEEETTEEEEEEEEEECCCTTSCCSSEEEEEEEE
T ss_pred eEEEECCHHHHHHHHHHhcc---cCCCc--chhhhhcccCCceEEEEEecCCEEEEEEEEecccccccCCCceEEEEEEE
Confidence 46999999998888765210 11110 001111 1 1256788899999999999885322 2378999999
Q ss_pred EccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceecccccccccCeeecCccc
Q 007903 521 VSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYYRLKFNCSSKSF 578 (585)
Q Consensus 521 V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YYrlGF~~~~~~~ 578 (585)
|+|+|||+|+|++|+++++ +++++.|+....+.........|.++||+..+..+
T Consensus 77 V~p~~rg~Gig~~Ll~~~~----~~~~~~g~~~i~l~~~~~a~~~y~~~GF~~~~~~~ 130 (146)
T 2jdc_A 77 TLEGYREQKAGSSLIKHAE----EILRKRGADLLWCNARTSASGYYKKLGFSEQGEVF 130 (146)
T ss_dssp ECTTSTTSSHHHHHHHHHH----HHHHHTTCCEEEEEEEGGGHHHHHHTTCEEEEEEE
T ss_pred ECHHHcccCHHHHHHHHHH----HHHHHcCCcEEEEEccccHHHHHHHcCCEEecccc
Confidence 9999999999999999999 88888888765443322233345579999886543
|
| >1y9w_A Acetyltransferase; structural genomics, Pro structure initiative, PSI, midwest center for structural GE MCSG; 1.90A {Bacillus cereus} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.21 E-value=2e-11 Score=109.06 Aligned_cols=117 Identities=13% Similarity=-0.024 Sum_probs=85.9
Q ss_pred ccccccccCHHHHHHHHHHHHHccccccCCHHHHHh-ccCeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCCcCC
Q 007903 450 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLK-ALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQ 528 (585)
Q Consensus 450 ~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~-~i~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGk 528 (585)
.+|+++++|++.+.+++.......+...+ ... ....+++++.+|++||++.+... .+.++|..++|+|+|||+
T Consensus 5 i~~~~~~~d~~~i~~l~~~~~~~~~~~~~----~~~~~~~~~~v~~~~~~~vG~~~~~~~--~~~~~i~~~~v~~~~rg~ 78 (140)
T 1y9w_A 5 HIENGTRIEGEYIKNKVIQYNMSILTDEV----KQPMEEVSLVVKNEEGKIFGGVTGTMY--FYHLHIDFLWVDESVRHD 78 (140)
T ss_dssp EEEECCHHHHHHHHHHHHHHHHHTSCGGG----CCCCEEEEEEEECTTCCEEEEEEEEEE--TTEEEEEEEEECGGGTTT
T ss_pred EeccCCHHHHHHHHHHHHHhhhccCchhh----hhhccceEEEEECCCCeEEEEEEEEEe--cCEEEEEEEEEcHHHcCC
Confidence 46889999999999997765443332111 111 11356777788999999998853 357899999999999999
Q ss_pred cHHHHHHHHHHhhhHHHHHHcCCcccCccceeccccc-ccccCeeecCc
Q 007903 529 GQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHS-YYRLKFNCSSK 576 (585)
Q Consensus 529 GIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~-YYrlGF~~~~~ 576 (585)
|+|++|+++++ +++++.|+....+...+..+.. |.++||+..+.
T Consensus 79 Gig~~ll~~~~----~~~~~~g~~~i~~~~~n~~a~~~y~~~Gf~~~~~ 123 (140)
T 1y9w_A 79 GYGSQLLHEIE----GIAKEKGCRLILLDSFSFQAPEFYKKHGYREYGV 123 (140)
T ss_dssp THHHHHHHHHH----HHHHHTTCCEEEEEEEGGGCHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHHH----HHHHHcCCCEEEEEcCCHhHHHHHHHCCCEEEEE
Confidence 99999999999 8888888876543332333444 45799998754
|
| >1mk4_A Hypothetical protein YQJY; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.20 E-value=1.1e-11 Score=111.71 Aligned_cols=123 Identities=12% Similarity=0.131 Sum_probs=86.1
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHHh-ccCeEEEEEECCeEEEEEEEeeec-cCCceEEeeEEEccCCc
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLK-ALDSFYVVEREGQIIACAALFPFF-KEKCGEVAAIGVSPECR 526 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~-~i~~~~Va~~dg~IVG~~~l~~~~-~~~~aeI~~L~V~PeyR 526 (585)
++||+++++|++.+.+++................+.. .-..+++++.+|++||++.+.... ..+.++|..++|+|+||
T Consensus 2 ~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~i~~~~v~p~~r 81 (157)
T 1mk4_A 2 MDIRTITSSDYEMVTSVLNEWWGGRQLKEKLPRLFFEHFQDTSFITSEHNSMTGFLIGFQSQSDPETAYIHFSGVHPDFR 81 (157)
T ss_dssp CEEEECCGGGHHHHHHHTTTSSTTCCCSCCCCTHHHHHCGGGCEEEESSSSEEEEEEEEECSSSTTEEEEEEEEECTTSC
T ss_pred cEEEECCHhHHHHHHHHHHHhccCcchhhHHHHHHHhccCCcEEEEEECCeEEEEEEEecCCCCCCeEEEEEEEECHHHc
Confidence 4689999999999999965432221111111111211 224577888899999999886432 35688999999999999
Q ss_pred CCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee---cccccccccCeeecC
Q 007903 527 GQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR---GRTHSYYRLKFNCSS 575 (585)
Q Consensus 527 GkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~---~~a~~YYrlGF~~~~ 575 (585)
|+|+|++|+++++ +++++.|+......... .....|.++||+..+
T Consensus 82 g~Gig~~ll~~~~----~~~~~~g~~~i~~~~~~~N~~a~~~y~k~Gf~~~~ 129 (157)
T 1mk4_A 82 KMQIGKQLYDVFI----ETVKQRGCTRVKCVTSPVNKVSIAYHTKLGFDIEK 129 (157)
T ss_dssp HHHHHHHHHHHHH----HHHHTTTCCEEEEEECTTCHHHHHHHHHTTCEECC
T ss_pred CCCHHHHHHHHHH----HHHHHCCCcEEEEEEcCCCHHHHHHHHHcCCEEcC
Confidence 9999999999999 88888888764332211 223345589999886
|
| >2ae6_A Acetyltransferase, GNAT family; GCN5-related N-acetyltransferase (GNAT), alpha-beta, structu genomics, PSI, protein structure initiative; HET: GOL; 2.19A {Enterococcus faecalis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.20 E-value=2.2e-11 Score=112.33 Aligned_cols=123 Identities=17% Similarity=0.169 Sum_probs=81.6
Q ss_pred cccccccccCHHHHHHHHHHHHHccccc----cCCHHHHHhcc-CeEEEEE-ECCeEEEEEEEeeecc----CCceEEee
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALV----RRTDEELLKAL-DSFYVVE-REGQIIACAALFPFFK----EKCGEVAA 518 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~----~~~~e~l~~~i-~~~~Va~-~dg~IVG~~~l~~~~~----~~~aeI~~ 518 (585)
+.||+++++|++.+.++........... +.+.+.+...+ ...+++. .+|++||++.+..... ...+++ .
T Consensus 8 i~iR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~-~ 86 (166)
T 2ae6_A 8 LTIRLVAEADWPALHALDQIIWTKKNTPAEIQPLSLAAYQEKMKDETIFVAISGQQLAGFIEVHPPTSLAAHQKQWLL-S 86 (166)
T ss_dssp EEEEECCGGGHHHHHHHHTTC-------------CCSHHHHHTTSSEEEEEEETTEEEEEEEEECSSSCGGGTTEEEE-E
T ss_pred eEEEEcCHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHhccCeEEEEeeCCEEEEEEEEEeccccCCCceEEEE-E
Confidence 5799999999999999975433222111 11112233322 3444554 8999999999875311 234555 8
Q ss_pred EEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee--ccccc-ccccCeeecCc
Q 007903 519 IGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR--GRTHS-YYRLKFNCSSK 576 (585)
Q Consensus 519 L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~--~~a~~-YYrlGF~~~~~ 576 (585)
++|+|+|||+|||++||++++ +++++.|+....+.... ..+.. |.++||+..+.
T Consensus 87 l~V~p~~rg~GiG~~ll~~~~----~~a~~~g~~~i~l~v~~~N~~A~~~Yek~GF~~~~~ 143 (166)
T 2ae6_A 87 IGVSPDFQDQGIGGSLLSYIK----DMAEISGIHKLSLRVMATNQEAIRFYEKHGFVQEAH 143 (166)
T ss_dssp EEECGGGTTSSHHHHHHHHHH----HHHHHHTCCEEEEEEETTCHHHHHHHHHTTCEEEEE
T ss_pred EEECHHHhCCCHHHHHHHHHH----HHHHHCCCCEEEEEeecCCHHHHHHHHHcCCEEeeE
Confidence 999999999999999999999 88888888775443322 23444 55799997754
|
| >2oh1_A Acetyltransferase, GNAT family; YP_013287.1, structural genom joint center for structural genomics, JCSG, protein structu initiative; HET: MSE UNL; 1.46A {Listeria monocytogenes str} | Back alignment and structure |
|---|
Probab=99.20 E-value=2.7e-11 Score=111.53 Aligned_cols=124 Identities=14% Similarity=0.075 Sum_probs=86.9
Q ss_pred cccccccccCHHHHHHHHHHHHHc---cccccCC-------HHHHHhcc--CeEEEEE-ECCeEEEEEEEeeec------
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVES---GALVRRT-------DEELLKAL--DSFYVVE-REGQIIACAALFPFF------ 509 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~---~~~~~~~-------~e~l~~~i--~~~~Va~-~dg~IVG~~~l~~~~------ 509 (585)
..||+++++|++.+.+++...... .....|. .+.+...+ ..++++. .+|++||++.+....
T Consensus 14 ~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~ 93 (179)
T 2oh1_A 14 FLVRFAAPTDRLKINDLMIDTARWLKESGSTQWSDILHGFDVHNIEQRIELGEVALFETEAGALAGAMIIRKTPSDWDTD 93 (179)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCHHHHHHCCCCTTHHHHHHTTCEEEEECTTCCEEEEEEEESSCCHHHHH
T ss_pred EEEEECCHHHHHHHHHHHHHHHHHHHhcCCcchhhccccchHHHHHHhhccCcEEEEEecCCeEEEEEEEecCCCcchhc
Confidence 679999999999999997654321 1111111 11122222 4577888 899999999987421
Q ss_pred ------cCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee--cccc-cccccCeeecCc
Q 007903 510 ------KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR--GRTH-SYYRLKFNCSSK 576 (585)
Q Consensus 510 ------~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~--~~a~-~YYrlGF~~~~~ 576 (585)
..+.++|..++|+|+|||+|||++|+++++ +++++.|+....+.... ..+. .|.++||+..+.
T Consensus 94 ~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~ll~~~~----~~a~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~ 165 (179)
T 2oh1_A 94 LWEDLAIDKAYYLHRIMVSRAFSGISLSKQMIYFAE----KLGIEMSVPFIRLDCIESNETLNQMYVRYGFQFSGK 165 (179)
T ss_dssp HHGGGTTSCEEEEEEEEECGGGTTSCHHHHHHHHHH----HHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEEEE
T ss_pred ccccCCCCceEEEEEEEECHHHcCCCHHHHHHHHHH----HHHHHcCCCEEEEEecCCcHHHHHHHHHCCCEEecc
Confidence 136789999999999999999999999999 88888888765432221 2233 455799998753
|
| >4fd4_A Arylalkylamine N-acetyltransferase like 5B; GNAT; 1.95A {Aedes aegypti} | Back alignment and structure |
|---|
Probab=99.20 E-value=1.1e-10 Score=111.19 Aligned_cols=125 Identities=18% Similarity=0.220 Sum_probs=86.3
Q ss_pred cccccccccCHHHHHHHHHHHHHcc-------ccccCCHHH----HHhcc--CeEEEEEE--CCeEEEEEEEeeec----
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESG-------ALVRRTDEE----LLKAL--DSFYVVER--EGQIIACAALFPFF---- 509 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~-------~~~~~~~e~----l~~~i--~~~~Va~~--dg~IVG~~~l~~~~---- 509 (585)
+.||+++++|++++.+++....... ...+...+. +...+ ..++++.. +|++||++.+....
T Consensus 7 i~iR~~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~g~ivG~~~~~~~~~~~~ 86 (217)
T 4fd4_A 7 IVLRVARLDELEQVREILHRIYYPEEGITISYVHGKSHTLDDERFSLSFVEQGTVVVAEDSAAKKFIGVSIAGPIQPGDP 86 (217)
T ss_dssp EEEEECCGGGHHHHHHHHHHHTTTTCHHHHHBTTCSSCCHHHHHHHHTTTTTTCEEEEEETTTTEEEEEEEEEEECTTHH
T ss_pred eEEEEcCHHHHHHHHHHHHHhcCCccchhhhccCCCccHHHHHHHHHHHHHCCCeEEEEECCCCCEEEEEEeeccCccch
Confidence 5799999999999999976542110 111111111 22222 56778887 89999999886421
Q ss_pred ------------------------------------cCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcc
Q 007903 510 ------------------------------------KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHIST 553 (585)
Q Consensus 510 ------------------------------------~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~ 553 (585)
.++..+|..++|+|+|||+|||++|+++++ +++++.|+..
T Consensus 87 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~V~p~~rg~Gig~~Ll~~~~----~~a~~~g~~~ 162 (217)
T 4fd4_A 87 DAMVEEAATTETKKWGDILKLLALLERTADVCGRYGLEKAYHVHILAVDPTYRGHSLGQRLLQFQM----DLSKKLGFKA 162 (217)
T ss_dssp HHHHHHHHHSSCHHHHHHHHHHHHHHHHHCHHHHHTCSCEEEEEEEEECTTSCSSCHHHHHHHHHH----HHHHHHTCSE
T ss_pred HHHHHhhhhhcChhHHHHHHHHHHHHhcccHHHHcCCCceEEEEEEEECHHHccCCHHHHHHHHHH----HHHHHcCCCE
Confidence 234567889999999999999999999999 8888888876
Q ss_pred cCccceecccc-cccccCeeecCcc
Q 007903 554 NGFPFLRGRTH-SYYRLKFNCSSKS 577 (585)
Q Consensus 554 ~g~~~~~~~a~-~YYrlGF~~~~~~ 577 (585)
.........+. .|.++||+..+..
T Consensus 163 i~~~~~n~~a~~~Y~k~GF~~~~~~ 187 (217)
T 4fd4_A 163 ISGDFTSVFSVKLAEKLGMECISQL 187 (217)
T ss_dssp EEEEECSHHHHHHHHHTTCEEEEEE
T ss_pred EEEEeCCHHHHHHHHHCCCeEEEeE
Confidence 43322223333 4557999988653
|
| >2ge3_A Probable acetyltransferase; structural GEN PSI, protein structure initiative, midwest center for struc genomics, MCSG; HET: ACO; 2.25A {Agrobacterium tumefaciens} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.20 E-value=7.1e-11 Score=108.70 Aligned_cols=124 Identities=12% Similarity=0.245 Sum_probs=87.4
Q ss_pred ccccccccccCHHHHHHHHHHHHHcccc----ccCCHHHHHh-------ccCeEEEEEECCeEEEEEEEeeecc---CCc
Q 007903 448 YEGTRTAKVTDLSGIKQIIQPLVESGAL----VRRTDEELLK-------ALDSFYVVEREGQIIACAALFPFFK---EKC 513 (585)
Q Consensus 448 ~~~IR~at~~D~~~I~~Li~~~~~~~~~----~~~~~e~l~~-------~i~~~~Va~~dg~IVG~~~l~~~~~---~~~ 513 (585)
...||+++++|++.+.+++......... .+.+.+.+.. .-..++++..+|++||++.+..... ...
T Consensus 7 ~~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~ 86 (170)
T 2ge3_A 7 TVTIKPIRAEHVESFHRALDAVSRERKYLSFLEAPPLEAVRAFVLDMIENDHPQFVAIADGDVIGWCDIRRQDRATRAHC 86 (170)
T ss_dssp CCEEEECCGGGHHHHHHHHHHHHTTCSSCSSSSCCCHHHHHHHHHHHHHTTCCEEEEEETTEEEEEEEEEECCSTTTTTE
T ss_pred cEEEeeCCHHHHHHHHHHHHhhhhcccccccCCCCCHHHHHHHHHhhccCCceEEEEEECCEEEEEEEEecccccCCCce
Confidence 3579999999999999998765433321 2233332221 1245778888999999999875322 235
Q ss_pred eEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee--cccc-cccccCeeecCc
Q 007903 514 GEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR--GRTH-SYYRLKFNCSSK 576 (585)
Q Consensus 514 aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~--~~a~-~YYrlGF~~~~~ 576 (585)
+++ .++|+|+|||+|+|++|+++++ +++++.|+....+.... ..+. .|.++||+..+.
T Consensus 87 ~~~-~~~v~p~~rg~Gig~~ll~~~~----~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~~~ 147 (170)
T 2ge3_A 87 GTL-GMGILPAYRNKGLGARLMRRTL----DAAHEFGLHRIELSVHADNARAIALYEKIGFAHEGR 147 (170)
T ss_dssp EEE-EEEECGGGTTSSHHHHHHHHHH----HHHHHHTCCEEEEEEETTCHHHHHHHHHHTCEEEEE
T ss_pred EEE-EEEECHHHhCCCHHHHHHHHHH----HHHHHCCceEEEEEEEcCCHHHHHHHHHCCCEEEeE
Confidence 666 7999999999999999999999 88888888775433222 2333 455799997643
|
| >3ec4_A Putative acetyltransferase from the GNAT family; YP_497011.1, joint center for structural genomics; 1.80A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID} | Back alignment and structure |
|---|
Probab=99.19 E-value=3.5e-11 Score=118.54 Aligned_cols=120 Identities=18% Similarity=0.161 Sum_probs=89.6
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHHhccCeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCCcCC
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQ 528 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGk 528 (585)
..||+++++|++.+.++. ...+..+|..+.+. ...+++++.+|++||++.+......+.++|..++|+|+|||+
T Consensus 99 ~~iR~~~~~D~~~i~~l~----~~~~~~~~~~~~~~--~~~~~v~~~~g~lVG~~~~~~~~~~~~~~i~~l~V~p~~Rg~ 172 (228)
T 3ec4_A 99 PGIVALGETDVPEMTALA----LATEPGPWASGTWR--YGQFYGVRIDGRLAAMAGERMRPAPNLAEVSGVCTWPEYRGR 172 (228)
T ss_dssp TTCEECCGGGHHHHHHHH----HHSCCSCCCTTGGG--SSCEEEEEETTEEEEEEEECCCSSTTEEEEEEEEECGGGTTS
T ss_pred CEEEECChhCHHHHHHHH----HhhCCCCcChhhcc--CccEEEEEECCEEEEEEEEEEecCCCcEEEEEEEECHHHcCC
Confidence 579999999999999993 33444455444332 357889999999999999874325678999999999999999
Q ss_pred cHHHHHHHHHHhhhHHHHHHcCCcccCccce--eccc-ccccccCeeecCcccc
Q 007903 529 GQGDKLLGLCIWPLLSETRYDHISTNGFPFL--RGRT-HSYYRLKFNCSSKSFH 579 (585)
Q Consensus 529 GIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~--~~~a-~~YYrlGF~~~~~~~~ 579 (585)
|||++|+++++ +++++.| ....+... +..+ ..|.++||+..+....
T Consensus 173 GiG~~Ll~~~~----~~a~~~g-~~i~l~v~~~N~~a~~~Y~k~GF~~~~~~~~ 221 (228)
T 3ec4_A 173 GLAARLIRKVI----AGMAARG-EVPYLHSYASNASAIRLYESLGFRARRAMTA 221 (228)
T ss_dssp SHHHHHHHHHH----HHHHHTT-CEEEEEEETTCHHHHHHHHHTTCEEEEEEEE
T ss_pred CHHHHHHHHHH----HHHHHcC-CeEEEEEeCCCHHHHHHHHHCCCEEEEEEEE
Confidence 99999999999 8888888 44322211 1223 3455899998866443
|
| >1ufh_A YYCN protein; alpha and beta, fold, acetyltransferase, structural genomics, PSI, protein structure initiative; 2.20A {Bacillus subtilis subsp} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.19 E-value=3e-11 Score=111.95 Aligned_cols=129 Identities=9% Similarity=0.050 Sum_probs=91.3
Q ss_pred cccccccccCHHHHHHHHHHHHHccc--cccCCH--------HHHHhcc--------CeEEEEEEC-CeEEEEEEEeeec
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGA--LVRRTD--------EELLKAL--------DSFYVVERE-GQIIACAALFPFF 509 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~--~~~~~~--------e~l~~~i--------~~~~Va~~d-g~IVG~~~l~~~~ 509 (585)
..||+++++|++.+.+++........ ...|+. +.+...+ ..+++++.+ |++||++.+....
T Consensus 27 i~iR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~vG~~~~~~~~ 106 (180)
T 1ufh_A 27 IMLTPMQTEEFRSYLTYTTKHYAEEKVKAGTWLPEDAQLLSKQVFTDLLPRGLETPHHHLWSLKLNEKDIVGWLWIHAEP 106 (180)
T ss_dssp CEEEECCHHHHHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHCTTGGGSTTEEEEEEESSSSCEEEEEEEEECT
T ss_pred EEEEcCCHHHHHHHHHHHHHHHhhhhhccCCCcchhhhhhhHHHHHHHHHhhcCCCCeeEEEEEcCCCCEEEEEEEEecC
Confidence 68999999999999999755432111 112222 1222222 257788888 9999999998543
Q ss_pred c--CCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccce--e-cccccccccCeeecCcccccc
Q 007903 510 K--EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFL--R-GRTHSYYRLKFNCSSKSFHIS 581 (585)
Q Consensus 510 ~--~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~--~-~~a~~YYrlGF~~~~~~~~~~ 581 (585)
. ...++|..++|+|+|||+|||++|++.++ +++++.|+........ + .....|.++||+..+..|..+
T Consensus 107 ~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~----~~~~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~~~~~~ 179 (180)
T 1ufh_A 107 EHPQQEAFIYDFGLYEPYRGKGYAKQALAALD----QAARSMGIRKLSLHVFAHNQTARKLYEQTGFQETDVVMSKK 179 (180)
T ss_dssp TCTTCEEEEEEEEECGGGCSSSHHHHHHHHHH----HHHHHTTCCEEEECCCTTCHHHHHHHHHTTCCCCCCCCCCC
T ss_pred CCCCCcEEEEEEEECHhhcCCChHHHHHHHHH----HHHHHCCCCEEEEEeccCcHHHHHHHHHCCCEEeeeEeeec
Confidence 2 36889999999999999999999999999 8888888876433222 1 233345589999988766543
|
| >1on0_A YYCN protein; structural genomics, alpha-beta protein with anti-parallel B strands, PSI, protein structure initiative; 2.20A {Bacillus subtilis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.19 E-value=5.1e-11 Score=109.29 Aligned_cols=130 Identities=10% Similarity=0.063 Sum_probs=88.2
Q ss_pred cccccccccCHHHHHHHHHHHHHcc--ccccCCHH--------HHHhcc--------CeEEEEEEC-CeEEEEEEEeeec
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESG--ALVRRTDE--------ELLKAL--------DSFYVVERE-GQIIACAALFPFF 509 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~--~~~~~~~e--------~l~~~i--------~~~~Va~~d-g~IVG~~~l~~~~ 509 (585)
..||+++++|++.+.++........ ....|+.+ .+...+ ..+++++.+ |++||++.+....
T Consensus 3 l~lR~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~~~~~~~ 82 (158)
T 1on0_A 3 IMLTPMQTEEFRSYLTYTTKHYAEEKVKAGTWLPEDAQLLSKQVFTDLLPRGLETPHHHLWSLKLNEKDIVGWLWIHAEP 82 (158)
T ss_dssp CEEEECCHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHCTTGGGSTTEEEEEEESSSSCEEEEEEEEECT
T ss_pred eeeeeCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEcCCCCceEEEEEEecC
Confidence 4689999999999998753321110 01123221 122111 245666666 8999999887432
Q ss_pred --cCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccce--ecccc-cccccCeeecCccccccc
Q 007903 510 --KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFL--RGRTH-SYYRLKFNCSSKSFHISL 582 (585)
Q Consensus 510 --~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~--~~~a~-~YYrlGF~~~~~~~~~~~ 582 (585)
....+++..++|+|+|||+|+|++|++.++ +++++.|+....+... +..+. .|.++||+..+..|..++
T Consensus 83 ~~~~~~~~i~~~~v~~~~rg~G~g~~ll~~~~----~~a~~~g~~~i~l~v~~~N~~a~~~Y~k~GF~~~g~~~~k~l 156 (158)
T 1on0_A 83 EHPQQEAFIYDFGLYEPYRGKGYAKQALAALD----QAARSMGIRKLSLHVFAHNQTARKLYEQTGFQETDVVMSKKL 156 (158)
T ss_dssp TCTTCEEEEEEEEECGGGCSSSHHHHHHHHHH----HHHHHHTCCEEEECCCTTCHHHHHHHHHTTCCCCCCCCCCCC
T ss_pred CCCCCeEEEEEEEEChhhcCCCHHHHHHHHHH----HHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEEeEEEEEec
Confidence 125678999999999999999999999999 8888889877543322 22344 455899999887666543
|
| >2i79_A Acetyltransferase, GNAT family; acetyl coenzyme *A, structur genomics, PSI-2, protein structure initiative; HET: ACO; 2.10A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=99.18 E-value=6.8e-11 Score=109.39 Aligned_cols=123 Identities=15% Similarity=0.113 Sum_probs=86.5
Q ss_pred cccccccccCHHHHHHHHHHHHHccc-c------ccCCHHHHHhcc--------CeEEEEEECCeEEEEEEEeeecc---
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGA-L------VRRTDEELLKAL--------DSFYVVEREGQIIACAALFPFFK--- 510 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~-~------~~~~~e~l~~~i--------~~~~Va~~dg~IVG~~~l~~~~~--- 510 (585)
..||+++++|++.+.++......... . .+++.+.....+ ..+++++.+|++||++.+.....
T Consensus 5 l~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~ 84 (172)
T 2i79_A 5 LLIREAEPKDAAELVAFLNRVSLETDFTSLDGDGILLTSEEMEIFLNKQASSDNQITLLAFLNGKIAGIVNITADQRKRV 84 (172)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHTTCSSSSCCTTCCCCCHHHHHHHHHHHHHCSSCEEEEEEETTEEEEEEEEECCCSTTT
T ss_pred EEEEeCCHHHHHHHHHHHHHHhhcCcccccCCccccCCHHHHHHHHHHhhcCCCcEEEEEEECCEEEEEEEEEecCCCcc
Confidence 46999999999999999766543221 1 123444332221 35778889999999999874321
Q ss_pred CCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcC-CcccCcccee--cccc-cccccCeeecCc
Q 007903 511 EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDH-ISTNGFPFLR--GRTH-SYYRLKFNCSSK 576 (585)
Q Consensus 511 ~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~g-i~~~g~~~~~--~~a~-~YYrlGF~~~~~ 576 (585)
...+++ .++|+|+|||+|||++||++++ ++|++.+ +....+.... ..+. .|.|+||+..+.
T Consensus 85 ~~~~~~-~~~v~~~~~g~Gig~~ll~~~~----~~a~~~~~~~~i~l~v~~~N~~A~~~yek~GF~~~g~ 149 (172)
T 2i79_A 85 RHIGDL-FIVIGKRYWNNGLGSLLLEEAI----EWAQASGILRRLQLTVQTRNQAAVHLYQKHGFVIEGS 149 (172)
T ss_dssp TTEEEE-EEEECGGGTTSSHHHHHHHHHH----HHHHHTSSCCEEEEEEETTCHHHHHHHHHTTCEEEEE
T ss_pred ceEEEE-EEEECHHHcCCCHHHHHHHHHH----HHHHhcCCeEEEEEEEECCCHHHHHHHHHCCCEEEeE
Confidence 234555 5999999999999999999999 8898887 7765433322 2334 455799998764
|
| >1vhs_A Similar to phosphinothricin acetyltransferase; structural genomics, unknown function; 1.80A {Bacillus subtilis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.18 E-value=3.4e-11 Score=112.41 Aligned_cols=123 Identities=24% Similarity=0.279 Sum_probs=85.5
Q ss_pred cccccccccCHHHHHHHHHHHHHcc---c-cccCCHHHHHhcc------CeEEEEEEC-CeEEEEEEEeeecc----CCc
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESG---A-LVRRTDEELLKAL------DSFYVVERE-GQIIACAALFPFFK----EKC 513 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~---~-~~~~~~e~l~~~i------~~~~Va~~d-g~IVG~~~l~~~~~----~~~ 513 (585)
+.||+++++|++.+.+++....... + ..+++.+.+...+ ..++|++.+ |++||++.+..... ...
T Consensus 3 ~~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~ 82 (175)
T 1vhs_A 3 LTLRLAEHRDLEAVVAIYNSTIASRMVTADTEPVTPEDRMEWFSGHTESRPLYVAEDENGNVAAWISFETFYGRPAYNKT 82 (175)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHTTTSSCSCSSCCCGGGGHHHHHTCCSSSCEEEEECTTSCEEEEEEEEESSSSGGGTTE
T ss_pred eEEEeCCHHHHHHHHHHHHHHhhcCCcccccccCCHHHHHHHHHhcCCCceEEEEEcCCCcEEEEEEEeccCCCCccCCE
Confidence 4699999999999999977644322 1 1233333222211 347788887 99999999875321 134
Q ss_pred eEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccce--ecccc-cccccCeeecCc
Q 007903 514 GEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFL--RGRTH-SYYRLKFNCSSK 576 (585)
Q Consensus 514 aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~--~~~a~-~YYrlGF~~~~~ 576 (585)
+++ .++|+|+|||+|||++||+.++ ++|++.|+....+... +..+. .|.|+||+..+.
T Consensus 83 ~e~-~l~V~p~~rg~GiG~~ll~~~~----~~a~~~g~~~i~l~v~~~N~~A~~~yek~GF~~~g~ 143 (175)
T 1vhs_A 83 AEV-SIYIDEACRGKGVGSYLLQEAL----RIAPNLGIRSLMAFIFGHNKPSLKLFEKHGFAEWGL 143 (175)
T ss_dssp EEE-EEEECGGGCSSSHHHHHHHHHH----HHGGGGTCSEEEEEEETTCHHHHHHHHHTTCEEEEE
T ss_pred EEE-EEEEChhhcCCCHHHHHHHHHH----HHHHhCCceEEEEEEecCCHHHHHHHHHCCCEEEeE
Confidence 555 7999999999999999999999 8888888876543222 22333 455899998753
|
| >2cy2_A TTHA1209, probable acetyltransferase; structural genomics, unknown function, NPPSFA; HET: ACO; 2.00A {Thermus thermophilus} SCOP: d.108.1.1 PDB: 1wk4_A* | Back alignment and structure |
|---|
Probab=99.18 E-value=1.4e-10 Score=105.26 Aligned_cols=124 Identities=19% Similarity=0.146 Sum_probs=87.3
Q ss_pred cccccccccCHHHHHHHHHHHHHccccc--------cCCHH----HHHhcc---C---eEEEEE-ECCeEEEEEEEeeec
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALV--------RRTDE----ELLKAL---D---SFYVVE-REGQIIACAALFPFF 509 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~--------~~~~e----~l~~~i---~---~~~Va~-~dg~IVG~~~l~~~~ 509 (585)
+.||+++++|++.+.+++.......+.. ++..+ .+...+ . .++++. .+|++||++.+.+..
T Consensus 1 ~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~vG~~~~~~~~ 80 (174)
T 2cy2_A 1 VRIRRAGLEDLPGVARVLVDTWRATYRGVVPEAFLEGLSYEGQAERWAQRLKTPTWPGRLFVAESESGEVVGFAAFGPDR 80 (174)
T ss_dssp CCEEECCGGGHHHHHHHHHHHHHHHSBTTBCHHHHHHCCHHHHHHHHHHHHHCTTCCCEEEEEECTTSCEEEEEEEEECC
T ss_pred CceeecCHhHHHHHHHHHHHHHHHhhcCcCCHHHHhhhhhhhhHHHHHHHHcCCCcCceEEEEEecCCEEEEEEEEecCC
Confidence 3689999999999999987654332211 11111 222222 3 466776 789999999998543
Q ss_pred c----CCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee---cccccccccCeeecCc
Q 007903 510 K----EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR---GRTHSYYRLKFNCSSK 576 (585)
Q Consensus 510 ~----~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~---~~a~~YYrlGF~~~~~ 576 (585)
. ...++|..++|+|+|||+|+|++|+++++ +++++.|+......... .....|.++||+..+.
T Consensus 81 ~~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~----~~~~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~ 150 (174)
T 2cy2_A 81 ASGFPGYTAELWAIYVLPTWQRKGLGRALFHEGA----RLLQAEGYGRMLVWVLKENPKGRGFYEHLGGVLLGE 150 (174)
T ss_dssp SCSCTTCCEEEEEEEECGGGCSSSHHHHHHHHHH----HHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEEEE
T ss_pred CCCCCCCceEEEEEEECHHHhCcCHHHHHHHHHH----HHHHhCCCceEEEEEECCChhHHHHHHHcCCeeece
Confidence 1 36889999999999999999999999999 88888888764332211 2233455899998764
|
| >2r7h_A Putative D-alanine N-acetyltransferase of GNAT FA; putative acetyltransferase of the GNAT family; 1.85A {Desulfovibrio desulfuricans subsp} | Back alignment and structure |
|---|
Probab=99.18 E-value=5.8e-11 Score=109.11 Aligned_cols=122 Identities=16% Similarity=0.108 Sum_probs=87.3
Q ss_pred ccccc-ccccCHHHHHHHHHHHHHcccccc---CCHHHHHhcc-------CeEEEEEECCeEEEEEEEeeec-cCCceEE
Q 007903 449 EGTRT-AKVTDLSGIKQIIQPLVESGALVR---RTDEELLKAL-------DSFYVVEREGQIIACAALFPFF-KEKCGEV 516 (585)
Q Consensus 449 ~~IR~-at~~D~~~I~~Li~~~~~~~~~~~---~~~e~l~~~i-------~~~~Va~~dg~IVG~~~l~~~~-~~~~aeI 516 (585)
..||+ ++++|++.+.+++... ..+... +..+.+...+ ..+++++.+|++||++.+.... ....++|
T Consensus 20 ~~ir~~~~~~D~~~i~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~i 97 (177)
T 2r7h_A 20 VAFRRQVLPQDALLVRRVVEST--GFFTPEEADVAQELVDEHLMHGAACGYHFVFATEDDDMAGYACYGPTPATEGTYDL 97 (177)
T ss_dssp EEEECSCCTTHHHHHHHHHHHT--SCSCHHHHHHHHHHHHHHHTC--CCSCEEEEEEETTEEEEEEEEEECTTSSSEEEE
T ss_pred eEEccCCCHHHHHHHHHHHHhh--CccCcchhhhHHHHHHHHHhhccCCCeEEEEEEECCeEEEEEEEEeccCCCCeEEE
Confidence 57999 9999999999996542 111110 1222232222 2678889999999999998543 2467899
Q ss_pred eeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccce----eccc-ccccccCeeecCc
Q 007903 517 AAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFL----RGRT-HSYYRLKFNCSSK 576 (585)
Q Consensus 517 ~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~----~~~a-~~YYrlGF~~~~~ 576 (585)
..++|+|+|||+|+|++|+++++ +++++.|+....+... +..+ ..|.++||+..+.
T Consensus 98 ~~~~v~p~~rg~Gig~~ll~~~~----~~~~~~g~~~i~l~~~~~~~N~~a~~~y~k~Gf~~~~~ 158 (177)
T 2r7h_A 98 YWIAVAPHRQHSGLGRALLAEVV----HDVRLTGGRLLFAETSGIRKYAPTRRFYERAGFSAEAV 158 (177)
T ss_dssp EEEEECTTTTTTTHHHHHHHHHH----HHHHHTTCCEEEEEEECSGGGHHHHHHHHHTTCEEEEE
T ss_pred EEEEECHHHhCCCHHHHHHHHHH----HHHHhcCCCEEEEEeccccccHHHHHHHHHcCCEeccc
Confidence 99999999999999999999999 8888888876543221 1233 3455799997754
|
| >2ree_A CURA; GNAT, S-acetyltransferase, decarboxylase, polyketid synthase, loading, phosphopantetheine, transferase, lyase; HET: SO4; 1.95A {Lyngbya majuscula} PDB: 2ref_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=4e-11 Score=116.17 Aligned_cols=100 Identities=18% Similarity=0.254 Sum_probs=76.8
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHHhcc----CeEEEEEECCeEEEEEEEeeec---------------
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFF--------------- 509 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i----~~~~Va~~dg~IVG~~~l~~~~--------------- 509 (585)
+.||+++++|+++|.+|....... ..+|+.+.+...+ ..++|++.+|++||++.+.+..
T Consensus 13 ~~iR~a~~~D~~~i~~l~~~~~~~--~~~~~~~~~~~~l~~~~~~~~va~~~g~ivG~~~~~~~~~~~~~~~~~~~~~~~ 90 (224)
T 2ree_A 13 YNLRHPKIEDLRDLIALETLCWSE--NLQVDNEEIYRRIFKIPQGQFILELEDKIVGAIYSQRIDNPQLLDNKTCTQVPL 90 (224)
T ss_dssp EEEECCCGGGHHHHHHHHHHHSCT--TTCCCHHHHHHHHHHCGGGCEEEEESSCEEEEEEEEEESCGGGGTTCCTTTGGG
T ss_pred eEEEECCHHHHHHHHHHHHHhccC--ccccCHHHHHHHHHhCCCceEEEEECCEEEEEEEEeccCchhhchhhcccchhh
Confidence 579999999999999996543221 1246666665443 3467888999999999885321
Q ss_pred ----cCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHc-CCccc
Q 007903 510 ----KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYD-HISTN 554 (585)
Q Consensus 510 ----~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~-gi~~~ 554 (585)
.....+|..|+|+|+|||+|||++||++++ +++++. |+...
T Consensus 91 ~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~----~~a~~~~g~~~i 136 (224)
T 2ree_A 91 LHTESGVVVQLLAVNILPELQNQGLGDRLLEFML----QYCAQISGVEKV 136 (224)
T ss_dssp GCCTTCSEEEEEEEEECGGGCSSSHHHHHHHHHH----HHHTTSTTCCEE
T ss_pred ccCCCCCeEEEEEEEECHHHcCCCHHHHHHHHHH----HHHHHhcCccEE
Confidence 124568999999999999999999999999 888886 87654
|
| >3ddd_A Putative acetyltransferase; NP_142035.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: COA; 2.25A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.17 E-value=8.8e-11 Score=119.10 Aligned_cols=120 Identities=14% Similarity=0.135 Sum_probs=87.3
Q ss_pred cccccccccccCHHHHHHHHHHHHHccccccCCHHH----HH---h-ccCeEEEEEECCeEEEEEEEeeeccCCceEEee
Q 007903 447 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEE----LL---K-ALDSFYVVEREGQIIACAALFPFFKEKCGEVAA 518 (585)
Q Consensus 447 ~~~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~----l~---~-~i~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~ 518 (585)
...+||+++++|++.+.+|+.. ...+ ++..+. +. . .-..+++++.+|++||++.+.+.. +.++|..
T Consensus 18 ~~~~iR~~~~~D~~~i~~l~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~vG~~~~~~~~--~~~~i~~ 91 (288)
T 3ddd_A 18 QGMIIRYATPDDIEDMVSIFID--AYNF--PGPRESVKSSFEISLEVQPDGCLLAFLKDEPVGMGCIFFYN--KQAWIGL 91 (288)
T ss_dssp TTCEEEECCGGGHHHHHHHHHH--HHTC--CSCHHHHHHHHHHHHHHCTTCEEEEEETTEEEEEEEEEECS--SEEEEEE
T ss_pred CCcEEEECCHHHHHHHHHHHHh--ccCC--CCchhhhHHHHHHHHhCCCCEEEEEEECCEEEEEEEEEEEC--CEEEEEE
Confidence 3478999999999999999653 1233 333331 11 1 125678999999999999888543 7899999
Q ss_pred EEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceecccccccccCeeecCcc
Q 007903 519 IGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYYRLKFNCSSKS 577 (585)
Q Consensus 519 L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YYrlGF~~~~~~ 577 (585)
++|+|+|||+|||++||++++ ++++ .++....+.........|.++||+..+..
T Consensus 92 ~~V~p~~rg~Gig~~Ll~~~~----~~~~-~~~~~~~l~~n~~a~~~y~k~Gf~~~~~~ 145 (288)
T 3ddd_A 92 MGVKKAYQRRGIGTEVFRRLL----EIGR-RKVDTIRLDASSQGYGLYKKFKFVDEYRT 145 (288)
T ss_dssp EEECGGGCSSSHHHHHHHHHH----HHHH-HHCSEEEEEECTTTHHHHHHTTCEEEEEE
T ss_pred EEECHHHcCCCHHHHHHHHHH----HHHH-cCCcEEEEEeCHHHHHHHHHCCCEEeceE
Confidence 999999999999999999999 7777 66665443332223334557999987653
|
| >1yx0_A Hypothetical protein YSNE; NESG, GFT structral genomics, SR220, structural genomics, PSI, protein structure initiative; NMR {Bacillus subtilis subsp} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.16 E-value=4.9e-11 Score=109.25 Aligned_cols=122 Identities=15% Similarity=0.166 Sum_probs=86.7
Q ss_pred cccccccccCHHHHHHHHHHHHHcccc-------ccCCHHHHHhccCeEEEEEECCeEEEEEEEeeeccCCceEEeeEEE
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGAL-------VRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGV 521 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~-------~~~~~e~l~~~i~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V 521 (585)
++||+++++| +.+.+++......... ..+..+.+...-..+++++.+|++||++.+... ....++|..++|
T Consensus 1 ~~iR~~~~~D-~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~-~~~~~~i~~~~V 78 (159)
T 1yx0_A 1 MHIKIDDLTG-RQVVSLVNEHLHSMTLMSPPESIHALGLEKLRGPEITFWSAWEGDELAGCGALKEL-DTRHGEIKSMRT 78 (159)
T ss_dssp CCEEEESSCC-HHHHHHHHHSSCCCCSCCCSSCCCCSCHHHHSSSSCEEEEEECSSSEEEEEEEEEE-ETTEEECCCCCC
T ss_pred CeeEEcCcCC-HHHHHHHHHHHHHhhccCCcchhhhhhHHHhcCCCceEEEEEECCEEEEEEEEEEc-CCCcEEEEEEEE
Confidence 3689999999 9999986543322111 011223333333678888999999999998843 456889999999
Q ss_pred ccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccce----eccc-ccccccCeeecCc
Q 007903 522 SPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFL----RGRT-HSYYRLKFNCSSK 576 (585)
Q Consensus 522 ~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~----~~~a-~~YYrlGF~~~~~ 576 (585)
+|+|||+|+|++|+++++ +++++.|+........ +..+ ..|.++||+..+.
T Consensus 79 ~p~~rg~Gig~~ll~~~~----~~~~~~g~~~i~l~~~~~~~N~~a~~~y~k~Gf~~~~~ 134 (159)
T 1yx0_A 79 SASHLRKGVAKQVLQHII----EEAEKRGYERLSLETGSMASFEPARKLYESFGFQYCEP 134 (159)
T ss_dssp STTTCCSCHHHHHHHHHH----HHHHHHTCSCEECCCSSCTTHHHHHHHHHTTSEEECCC
T ss_pred CHhhcCCCHHHHHHHHHH----HHHHhCCCcEEEEEecccccCchHHHHHHHcCCEEccc
Confidence 999999999999999999 8888878766433222 1223 3455799998754
|
| >1m4i_A Aminoglycoside 2'-N-acetyltransferase; COA binding motif; HET: COA KAN PAP; 1.50A {Mycobacterium tuberculosis} SCOP: d.108.1.1 PDB: 1m4d_A* 1m4g_A* 1m44_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=7.6e-11 Score=109.67 Aligned_cols=117 Identities=21% Similarity=0.231 Sum_probs=83.0
Q ss_pred cccccccccCH-----HHHHHHHHHHHHccccccCCHHHHHhcc--CeEEEEEECCeEEEEEEEeeec---c-C--CceE
Q 007903 449 EGTRTAKVTDL-----SGIKQIIQPLVESGALVRRTDEELLKAL--DSFYVVEREGQIIACAALFPFF---K-E--KCGE 515 (585)
Q Consensus 449 ~~IR~at~~D~-----~~I~~Li~~~~~~~~~~~~~~e~l~~~i--~~~~Va~~dg~IVG~~~l~~~~---~-~--~~ae 515 (585)
+.||+++++|+ +.+.+++.... ......+.+...+ ..+++ +.+|++||++.+.... . . ..++
T Consensus 6 ~~ir~~~~~D~~~~~~~~i~~l~~~~~----~~~~~~~~~~~~~~~~~~~v-~~~~~~vG~~~~~~~~~~~~~~~~~~~~ 80 (181)
T 1m4i_A 6 HTARLVHTADLDSETRQDIRQMVTGAF----AGDFTETDWEHTLGGMHALI-WHHGAIIAHAAVIQRRLIYRGNALRCGY 80 (181)
T ss_dssp TCCEEEEGGGCCHHHHHHHHHHHHHHT----TTCCCHHHHHHTCSSEEEEE-EETTEEEEEEEEEEEEEEETTEEEEEEE
T ss_pred eEEEECChHHcchhHHHHHHHHHHHHc----ccccCHHHHHhhcCCcEEEE-EECCEEEEEEEEEEeccccCCCCcceeE
Confidence 57999999999 88888854422 2233456666655 45677 8899999999987432 1 2 5678
Q ss_pred EeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceecccc-cccccCeeecCc
Q 007903 516 VAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTH-SYYRLKFNCSSK 576 (585)
Q Consensus 516 I~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~-~YYrlGF~~~~~ 576 (585)
|..++|+|+|||+|+|++|+++++ +++++ ++....... +..+. .|.++||+..+.
T Consensus 81 i~~l~V~p~~rg~Gig~~Ll~~~~----~~a~~-~~~l~~~~~-n~~a~~~y~k~GF~~~~~ 136 (181)
T 1m4i_A 81 VEGVAVRADWRGQRLVSALLDAVE----QVMRG-AYQLGALSS-SARARRLYASRGWLPWHG 136 (181)
T ss_dssp EEEEEECGGGTTSSHHHHHHHHHH----HHHHH-HCSEEEEEC-CTTTHHHHHHTTCEECCS
T ss_pred EEEEEECHHHcCCCHHHHHHHHHH----HHHHh-CcEEEEecC-CHHHHHHHHhcCCEEcCC
Confidence 999999999999999999999999 77766 332211111 22333 455799998764
|
| >3f8k_A Protein acetyltransferase; GCN5-related N-acetyltransferase; HET: COA; 1.84A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
Probab=99.16 E-value=3e-11 Score=109.40 Aligned_cols=118 Identities=25% Similarity=0.271 Sum_probs=81.8
Q ss_pred cccccccccCHHHHHHHHHHHHHcc------ccccCCHHHHHh---cc-CeEEEEEECCeEEEEEEEeeeccCCceEEee
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESG------ALVRRTDEELLK---AL-DSFYVVEREGQIIACAALFPFFKEKCGEVAA 518 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~------~~~~~~~e~l~~---~i-~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~ 518 (585)
..||+++++|++.+.+++....... ...+++.+.+.. .. ..+++++.+|++||++.+. + .+++ .
T Consensus 5 ~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~----~-~~~~-~ 78 (160)
T 3f8k_A 5 IKIRKATKEDWEKIYQLYNSLSDEDLYLRFFHLYRITEEDAKKIASNEDHVTFLAEVDGKVVGEASLH----K-DGEF-S 78 (160)
T ss_dssp CEEEECCGGGHHHHHHHHHHSCHHHHHHHTHHHHHTC-----------CEEEEEEEETTEEEEEEEEE----T-TSBE-E
T ss_pred EEEEECCcchHHHHHHHHHhccccccceeeccccccCHHHHHHHhccCCceEEEEEECCeEEEEEEee----c-ceEE-E
Confidence 5799999999999999976532211 011233333333 11 3468889999999999987 2 6667 8
Q ss_pred EEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee--cccc-cccccCeeecCc
Q 007903 519 IGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR--GRTH-SYYRLKFNCSSK 576 (585)
Q Consensus 519 L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~--~~a~-~YYrlGF~~~~~ 576 (585)
++|+|+|||+|+|++|+++++ +++++.|+......... ..+. .|.++||+..+.
T Consensus 79 ~~v~p~~rg~Gig~~ll~~~~----~~~~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~ 135 (160)
T 3f8k_A 79 LVVHRNYRTLGIGTLLVKTLI----EEAKKSGLSTVKFYTLPENTPMIKIGRKLGFKMRFY 135 (160)
T ss_dssp EEECGGGTTSSHHHHHHHHHH----HHHHHTTCSEEEEEECTTCHHHHHHHHHHTCEEEEC
T ss_pred EEECHHHcCCCHHHHHHHHHH----HHHHHcCceEEEEEEcccCHHHHHHHHHcCCEEEee
Confidence 999999999999999999999 88888888764432221 1233 455799998743
|
| >2b5g_A Diamine acetyltransferase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: ALY; 1.70A {Homo sapiens} SCOP: d.108.1.1 PDB: 2b4d_A* 2jev_A* 2g3t_A 2f5i_A 2b3u_A 2b3v_A* 2b4b_A* 2b58_A* 2fxf_A* 3bj7_A* 3bj8_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=9e-11 Score=107.18 Aligned_cols=124 Identities=22% Similarity=0.157 Sum_probs=89.6
Q ss_pred cccccccccCHHHHHHHHHHHHHccc---cccCCHHHHHhc-c-----CeEEEEEECCe--------EEEEEEEeeec--
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGA---LVRRTDEELLKA-L-----DSFYVVEREGQ--------IIACAALFPFF-- 509 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~---~~~~~~e~l~~~-i-----~~~~Va~~dg~--------IVG~~~l~~~~-- 509 (585)
..||+++++|++.+.+++........ ..+++.+.+... + ..++|++.+++ +||++.+....
T Consensus 4 ~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~ivG~~~~~~~~~~ 83 (171)
T 2b5g_A 4 FVIRPATAADCSDILRLIKELAKYEYMEEQVILTEKDLLEDGFGEHPFYHCLVAEVPKEHWTPEGHSIVGFAMYYFTYDP 83 (171)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHTCC----CCCCCHHHHHHHHSSSSCSCEEEEEECCGGGCCTTCCCEEEEEEEEEEEET
T ss_pred eEEEECCHHHHHHHHHHHHHHHHhhccccccccCHHHHHHHHhccCCCcEEEEEEECCCcccccCCceEEEEEEEeecCC
Confidence 57999999999999999876543221 223455555443 2 46788888877 89999986432
Q ss_pred -cCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee---cccccccccCeeecCc
Q 007903 510 -KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR---GRTHSYYRLKFNCSSK 576 (585)
Q Consensus 510 -~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~---~~a~~YYrlGF~~~~~ 576 (585)
....+++..++|+|+|||+|||++|+++++ +++++.|+......... .....|.++||+..+.
T Consensus 84 ~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~----~~~~~~g~~~i~l~~~~~N~~a~~~y~k~Gf~~~~~ 150 (171)
T 2b5g_A 84 WIGKLLYLEDFFVMSDYRGFGIGSEILKNLS----QVAMRCRCSSMHFLVAEWNEPSINFYKRRGASDLSS 150 (171)
T ss_dssp TTEEEEEEEEEEECGGGCSSSHHHHHHHHHH----HHHHHHTCSEEEEEEETTCHHHHHHHHTTTCEEHHH
T ss_pred cCCceEEEEEEEECHhhhCCCHHHHHHHHHH----HHHHHCCCCEEEEEEcccCHHHHHHHHHcCCEeccc
Confidence 223588999999999999999999999999 88888888765433221 2233455899998754
|
| >1yr0_A AGR_C_1654P, phosphinothricin acetyltransferase; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.00A {Agrobacterium tumefaciens str} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.15 E-value=2.5e-10 Score=105.89 Aligned_cols=124 Identities=19% Similarity=0.154 Sum_probs=84.7
Q ss_pred cccccccccCHHHHHHHHHHHHHccc----cccCCHHHHHhcc-------CeEEEEEECCeEEEEEEEeeeccC---Cce
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGA----LVRRTDEELLKAL-------DSFYVVEREGQIIACAALFPFFKE---KCG 514 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~----~~~~~~e~l~~~i-------~~~~Va~~dg~IVG~~~l~~~~~~---~~a 514 (585)
+.||+++++|++.+.+++........ ..+.+.+.+...+ ..+++++.+|++||++.+.+.... ...
T Consensus 5 i~iR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~~ 84 (175)
T 1yr0_A 5 VELRDATVDDLSGIMEIYNDAVVNTTAIWNEVVVDLENRKDWFAARTSRGFPVIVAILDGKVAGYASYGDWRAFDGYRHT 84 (175)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHHCSSSSSCCCCCHHHHHHHHHHHHHHTCCEEEEEETTEEEEEEEEEESSSSGGGTTE
T ss_pred EEEecCCHhHHHHHHHHHHHHHhcCcccccccCCCHHHHHHHHHhhcccCceEEEEEeCCcEEEEEEEecccCccccCce
Confidence 46999999999999999766543321 1223444322211 346777889999999998743211 122
Q ss_pred EEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccce--ecccc-cccccCeeecCc
Q 007903 515 EVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFL--RGRTH-SYYRLKFNCSSK 576 (585)
Q Consensus 515 eI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~--~~~a~-~YYrlGF~~~~~ 576 (585)
....++|+|+|||+|||++|++.++ +++++.|+........ +.++. .|.|+||+..+.
T Consensus 85 ~~~~~~V~p~~rg~Gig~~ll~~~~----~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~g~ 145 (175)
T 1yr0_A 85 REHSVYVHKDARGHGIGKRLMQALI----DHAGGNDVHVLIAAIEAENTASIRLHESLGFRVVGR 145 (175)
T ss_dssp EEEEEEECTTSTTSSHHHHHHHHHH----HHHHTTTCCEEEEEEETTCHHHHHHHHHTTCEEEEE
T ss_pred EEEEEEECccccCCCHHHHHHHHHH----HHHHhCCccEEEEEecCCCHHHHHHHHHCCCEEEEE
Confidence 2346999999999999999999999 8888888876533222 22333 455799997753
|
| >3owc_A Probable acetyltransferase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: COA; 1.90A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.15 E-value=5.5e-11 Score=110.17 Aligned_cols=124 Identities=17% Similarity=0.168 Sum_probs=89.7
Q ss_pred cccccccccCHHHHHHHHHHHHH------ccccccCCHHHHHhc---------cCeEEEEEECCeEEEEEEEeeeccCCc
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVE------SGALVRRTDEELLKA---------LDSFYVVEREGQIIACAALFPFFKEKC 513 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~------~~~~~~~~~e~l~~~---------i~~~~Va~~dg~IVG~~~l~~~~~~~~ 513 (585)
..||+++++|++.+.+++..... .....+++.+.+... -..++++..+|++||++.+.+....+.
T Consensus 14 i~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~ 93 (188)
T 3owc_A 14 LQLVPFQLGHFPILQRWFATEKELVQWAGPALRHPLSLEQMHEDLAESRRRPPLRLLWSACRDDQVIGHCQLLFDRRNGV 93 (188)
T ss_dssp EEEEECCGGGHHHHHTTCCSHHHHHHHHCTTCCSSCCGGGGHHHHHHHHSSSCSEEEEEEEETTEEEEEEEEEEETTTTE
T ss_pred EEEEECcHHHHHHHHHHHhChHHHhhhcCccccCcccHHHHHHHHHHhccCCCCcEEEEEEECCcEEEEEEEEecCCCCE
Confidence 67999999999999998644321 112223333332222 146788889999999999986546788
Q ss_pred eEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHH-cCCcccCcccee--cccc-cccccCeeecCc
Q 007903 514 GEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRY-DHISTNGFPFLR--GRTH-SYYRLKFNCSSK 576 (585)
Q Consensus 514 aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~-~gi~~~g~~~~~--~~a~-~YYrlGF~~~~~ 576 (585)
++|..++|+|+|||+|+|++|++.++ +++++ .++......... ..+. .|.++||+..+.
T Consensus 94 ~~i~~~~v~p~~rg~Gig~~ll~~~~----~~a~~~~g~~~i~~~~~~~N~~a~~~y~k~GF~~~~~ 156 (188)
T 3owc_A 94 VRLARIVLAPSARGQGLGLPMLEALL----AEAFADADIERVELNVYDWNAAARHLYRRAGFREEGL 156 (188)
T ss_dssp EEEEEEEECGGGTTSSCHHHHHHHHH----HHHHHSTTCCEEEEEEETTCHHHHHHHHHTTCEEEEE
T ss_pred EEEEEEEEcHHHhCCChhHHHHHHHH----HHHHHhhCceEEEEEEecCCHHHHHHHHHcCCEEeee
Confidence 99999999999999999999999999 88888 488765433221 2233 455799997753
|
| >2j8m_A Acetyltransferase PA4866 from P. aeruginosa; GCN5 family, phosphinothricin, methionine sulfone, methionine sulfoximine; 1.44A {Pseudomonas aeruginosa} PDB: 2bl1_A 2j8n_A 2j8r_A* 1yvo_A | Back alignment and structure |
|---|
Probab=99.14 E-value=1.9e-10 Score=106.41 Aligned_cols=123 Identities=21% Similarity=0.204 Sum_probs=84.8
Q ss_pred cccccccccCHHHHHHHHHHHHHccc----cccCCHHHHHhcc-------CeEEEE-EECCeEEEEEEEeeecc----CC
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGA----LVRRTDEELLKAL-------DSFYVV-EREGQIIACAALFPFFK----EK 512 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~----~~~~~~e~l~~~i-------~~~~Va-~~dg~IVG~~~l~~~~~----~~ 512 (585)
+.||+++++|++.+.++......... ..+.+.+.+...+ ..++++ +.+|++||++.+..... ..
T Consensus 3 ~~iR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~vG~~~~~~~~~~~~~~~ 82 (172)
T 2j8m_A 3 ASIRDAGVADLPGILAIYNDAVGNTTAIWNETPVDLANRQAWFDARARQGYPILVASDAAGEVLGYASYGDWRPFEGFRG 82 (172)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHHCSSSSCCCCCCHHHHHHHHHHHHHHTCCEEEEECTTCCEEEEEEEEESSSSGGGTT
T ss_pred eEEEECCHHHHHHHHHHHHHHhhcccccccCCCCCHHHHHHHHHhhcccCceEEEEEcCCCeEEEEEEEecccCCcccCc
Confidence 46999999999999999776543221 1123444322211 346677 66899999999874321 12
Q ss_pred ceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccce--ecccc-cccccCeeecCc
Q 007903 513 CGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFL--RGRTH-SYYRLKFNCSSK 576 (585)
Q Consensus 513 ~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~--~~~a~-~YYrlGF~~~~~ 576 (585)
..+ ..++|+|+|||+|||++|+++++ ++|++.|+........ +..+. .|.++||+..+.
T Consensus 83 ~~~-~~~~V~p~~rg~Gig~~ll~~~~----~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~g~ 144 (172)
T 2j8m_A 83 TVE-HSVYVRDDQRGKGLGVQLLQALI----ERARAQGLHVMVAAIESGNAASIGLHRRLGFEISGQ 144 (172)
T ss_dssp EEE-EEEEECTTCTTSSHHHHHHHHHH----HHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEEEE
T ss_pred eEE-EEEEEChhhcCCCHHHHHHHHHH----HHHHHCCccEEEEEEcCCCHHHHHHHHHCCCEEEee
Confidence 334 36999999999999999999999 8898899887544322 22334 455799998754
|
| >3exn_A Probable acetyltransferase; GCN5-related N-acetyltransferase, MCSG, P structural genomics, protein structure initiative; HET: ACO; 1.80A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.14 E-value=1.4e-10 Score=104.13 Aligned_cols=123 Identities=7% Similarity=0.000 Sum_probs=85.4
Q ss_pred ccccccccccCHHHHHHHHHHH--HHccc-cccCCHHHHHhcc--------CeEEEEEECCeEEEEEEEeee-ccCCceE
Q 007903 448 YEGTRTAKVTDLSGIKQIIQPL--VESGA-LVRRTDEELLKAL--------DSFYVVEREGQIIACAALFPF-FKEKCGE 515 (585)
Q Consensus 448 ~~~IR~at~~D~~~I~~Li~~~--~~~~~-~~~~~~e~l~~~i--------~~~~Va~~dg~IVG~~~l~~~-~~~~~ae 515 (585)
...||+++++|++.+.+++... ..... ..+.+.+.+...+ ..++++..+|++||++.+... ...+.++
T Consensus 11 ~~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~ 90 (160)
T 3exn_A 11 TLDLAPVTPKDAPLLHRVFHLSPSYFALIGMELPTLEDVVRDLQTLEVDPRRRAFLLFLGQEPVGYLDAKLGYPEAEDAT 90 (160)
T ss_dssp CCEEEECCGGGHHHHHHHHHTCHHHHHHTTCCCCCHHHHHHHHHHHHTCTTEEEEEEEETTEEEEEEEEEETCSSTTCEE
T ss_pred ceEEEECChhhHHHHHHHHHhChHHHhccccCCCChHHHHHHHHHhhhCCCceEEEEEECCeEEEEEEeecccCCCCceE
Confidence 3679999999999999997652 11111 1223444444332 357888999999999998853 2456899
Q ss_pred EeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccce--eccc-ccccccCeeecCc
Q 007903 516 VAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFL--RGRT-HSYYRLKFNCSSK 576 (585)
Q Consensus 516 I~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~--~~~a-~~YYrlGF~~~~~ 576 (585)
|..++|+|+|||+|+|++|++.++ +++++ +........ +..+ ..|.++||+..+.
T Consensus 91 i~~l~v~p~~rg~Gig~~ll~~~~----~~~~~--~~~i~~~~~~~n~~a~~~y~~~Gf~~~~~ 148 (160)
T 3exn_A 91 LSLLLIREDHQGRGLGRQALERFA----AGLDG--VRRLYAVVYGHNPKAKAFFQAQGFRYVKD 148 (160)
T ss_dssp EEEEEECGGGTTSSHHHHHHHHHH----HTCTT--CCEEEEEEESSCHHHHHHHHHTTCEEEEE
T ss_pred EEEEEECHHHcCCCHHHHHHHHHH----HHHhh--CCeEEEEEeeCCHHHHHHHHHCCCEEccc
Confidence 999999999999999999999999 66555 333222111 1223 3455799997643
|
| >3ey5_A Acetyltransferase-like, GNAT family; structural genomics, APC60148, GNAT famil protein structure initiative; 2.15A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.13 E-value=6.7e-11 Score=110.67 Aligned_cols=125 Identities=18% Similarity=0.145 Sum_probs=83.0
Q ss_pred ccccccccccCHHHHHHHHHHHHHccccc--cCCHHHHHhcc-----CeEEEEEECCeEEEEEEEeeeccCCceEEeeEE
Q 007903 448 YEGTRTAKVTDLSGIKQIIQPLVESGALV--RRTDEELLKAL-----DSFYVVEREGQIIACAALFPFFKEKCGEVAAIG 520 (585)
Q Consensus 448 ~~~IR~at~~D~~~I~~Li~~~~~~~~~~--~~~~e~l~~~i-----~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~ 520 (585)
.++||+++++|.+.+.++...... .+.. ....+.+...+ ..+++++.+|++||++.+... ++.++|..++
T Consensus 4 ~~~ir~~~~~d~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~--~~~~~i~~l~ 80 (181)
T 3ey5_A 4 MIRFQPITTSDVQHYKFMEELLVE-SFPPEEYRELEHLREYTDRIGNFHNNIIFDDDLPIGFITYWDF--DEFYYVEHFA 80 (181)
T ss_dssp -CEEEECCTTSHHHHHHHHHHHHH-HSCGGGSCCHHHHHHHHHHCTTEEEEEEEETTEEEEEEEEEEC--SSCEEEEEEE
T ss_pred ceEEEECccccHHHHHHHHHHHHH-hCCccccchHHHHHHHhccCCCeEEEEEEECCEEEEEEEEEEc--CCeEEEEEEE
Confidence 468999999999888777544322 2211 12223333222 468889999999999998843 5689999999
Q ss_pred EccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccc--eeccccc-ccccCeeecCcccc
Q 007903 521 VSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPF--LRGRTHS-YYRLKFNCSSKSFH 579 (585)
Q Consensus 521 V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~--~~~~a~~-YYrlGF~~~~~~~~ 579 (585)
|+|+|||+|||++||++++ ++++...+....... .+.++.. |.++||+..+..++
T Consensus 81 V~p~~rg~GiG~~Ll~~~~----~~a~~~~~l~v~~~~~~~n~~a~~fY~k~GF~~~~~~~~ 138 (181)
T 3ey5_A 81 TNPALRNGGYGKRTLEHLC----EFLKRPIVLEVERPVEEMAKRRINFYQRHGFTLWEKDYY 138 (181)
T ss_dssp ECGGGTTSSHHHHHHHHHH----HHCCSCEEEEECCTTSHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred EchhhcCCCHHHHHHHHHH----HhhhhCeEEEEeCCCccchHHHHHHHHHCCCEECCcccc
Confidence 9999999999999999999 666522221111100 1112334 44799999874443
|
| >3s6f_A Hypothetical acetyltransferase; acyl-COA N-acyltransferases, structural genomics, joint CENT structural genomics, JCSG; HET: MSE COA; 1.19A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=99.13 E-value=4.7e-11 Score=107.92 Aligned_cols=122 Identities=16% Similarity=0.184 Sum_probs=84.7
Q ss_pred ccccccc-ccCHHHHHHHHHHHHHccccccCCHHHHHhcc---CeEEEEEE-CCeEEEEEEEeeeccCCceEEeeEEEcc
Q 007903 449 EGTRTAK-VTDLSGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVVER-EGQIIACAALFPFFKEKCGEVAAIGVSP 523 (585)
Q Consensus 449 ~~IR~at-~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i---~~~~Va~~-dg~IVG~~~l~~~~~~~~aeI~~L~V~P 523 (585)
..+|... +.|.+++.+++ ..+..+.+.+.+...+ ..++++.+ +|++||++.+.. .....++|..++|+|
T Consensus 10 i~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~-~~~~~~~i~~l~V~p 83 (145)
T 3s6f_A 10 IQFQTTLEGVTPAQLGGFF-----EGWPNPPTPETLWRILDRAAVFVLARTPDGQVIGFVNALS-DGILAASIPLLEVQA 83 (145)
T ss_dssp CEEESSCTTCCGGGSCSCC-----TTCSSCCCHHHHHHHHHHSSEEEEEECTTCCEEEEEEEEE-CSSSEEECCCEEECT
T ss_pred eEEeeccccCCHHHHHHHH-----hcCCCCCCHHHHHHHhccCceEEEEECCCCCEEEEEEEEe-cCCcEEEEEEEEECH
Confidence 4567654 77888887774 2333334556555544 45666666 799999998874 344678999999999
Q ss_pred CCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceeccccccc-ccCeeecCcccccccc
Q 007903 524 ECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYY-RLKFNCSSKSFHISLH 583 (585)
Q Consensus 524 eyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YY-rlGF~~~~~~~~~~~~ 583 (585)
+|||+|+|++||++++ +.++..+ ...+.. ...+..|| ++||+..+..+...++
T Consensus 84 ~~rg~GiG~~Ll~~~~----~~~~~~~--~~~l~~-~~~a~~fY~k~GF~~~~~~~~~~~~ 137 (145)
T 3s6f_A 84 GWRSLGLGSELMRRVL----TELGDLY--MVDLSC-DDDVVPFYERLGLKRANAMFLRRYD 137 (145)
T ss_dssp TSCSSSHHHHHHHHHH----HHHCSCS--EEECCC-CGGGHHHHHHTTCCCCCCCCCCCGG
T ss_pred HHhcCcHHHHHHHHHH----HHhcCCC--eEEEEE-CHHHHHHHHHCCCEECCcEEEEEec
Confidence 9999999999999999 7765322 222222 23444455 7999999887766554
|
| >2k5t_A Uncharacterized protein YHHK; N-acetyl transferase, COA, bound ligand, coenzyme A, structural genomics, PSI-2, protein structure initiative; HET: COA; NMR {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=99.13 E-value=3.5e-11 Score=106.93 Aligned_cols=115 Identities=14% Similarity=0.135 Sum_probs=77.2
Q ss_pred ccccccccCHHHHHHHHHHHHHccccccCCHHHHHhccCeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCCcCCc
Q 007903 450 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQG 529 (585)
Q Consensus 450 ~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGkG 529 (585)
.+|+++++|+.++.+++.. .....| ....-..+++++.++++||++.+... ...++|..|+|+|+|||+|
T Consensus 7 ~i~~~~~~d~~~l~~l~~~----~~~~~~----~~~~~~~~~va~~~~~ivG~~~~~~~--~~~~~i~~l~V~p~~rg~G 76 (128)
T 2k5t_A 7 RLEKFSDQDRIDLQKIWPE----YSPSSL----QVDDNHRIYAARFNERLLAAVRVTLS--GTEGALDSLRVREVTRRRG 76 (128)
T ss_dssp ECSSCCHHHHHHHHHHCTT----SCCCCC----CCCSSEEEEEEEETTEEEEEEEEEEE--TTEEEEEEEEECTTCSSSS
T ss_pred EehhCCHHHHHHHHHHccc----CCHHHh----EECCCccEEEEEECCeEEEEEEEEEc--CCcEEEEEEEECHHHcCCC
Confidence 4677888898888877422 111122 01111457888899999999998742 3469999999999999999
Q ss_pred HHHHHHHHHHhhhHHHHHHcCCcccCccce----eccccccc-ccCeeecCccccc
Q 007903 530 QGDKLLGLCIWPLLSETRYDHISTNGFPFL----RGRTHSYY-RLKFNCSSKSFHI 580 (585)
Q Consensus 530 IGk~LL~~~~~~a~~~A~~~gi~~~g~~~~----~~~a~~YY-rlGF~~~~~~~~~ 580 (585)
||++||++++ ++++. +....+... +..+..|| ++||+..+..|..
T Consensus 77 iG~~Ll~~~~----~~~~~--~~~~~l~~~~~~~~~~a~~fY~~~GF~~~~~~~~~ 126 (128)
T 2k5t_A 77 VGQYLLEEVL----RNNPG--VSCWWMADAGVEDRGVMTAFMQALGFTTQQGGWEK 126 (128)
T ss_dssp HHHHHHHHHH----HHSCS--CCEEEECCTTCSTHHHHHHHHHHHTCEECSSSEEE
T ss_pred HHHHHHHHHH----HHhhh--CCEEEEeccCccccHHHHHHHHHcCCCccccchhc
Confidence 9999999999 66543 221111100 11344455 7999998876643
|
| >1y9k_A IAA acetyltransferase; structural genomics, midwest center for structural genomics bacillus cereus ATCC 14579, PSI; 2.39A {Bacillus cereus atcc 14579} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.13 E-value=1.1e-10 Score=106.17 Aligned_cols=113 Identities=17% Similarity=0.205 Sum_probs=85.3
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHHhcc--CeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCCc
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECR 526 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i--~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyR 526 (585)
..||+++++|++.+..+ .. ..+.+.+...+ ..+++++.+|++||++.+.+ ..++.++|..++|+|+||
T Consensus 5 ~~ir~~~~~D~~~i~~~----~~-----~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~-~~~~~~~i~~~~v~p~~r 74 (157)
T 1y9k_A 5 VVIERIPKEAIPKSLLL----LA-----DPSERQIATYVQRGLTYVAKQGGSVIGVYVLLE-TRPKTMEIMNIAVAEHLQ 74 (157)
T ss_dssp CEEEEECGGGCCHHHHH----HH-----CCCHHHHHHHHHHSEEEEEECSSSEEEEEEEEE-CSTTEEEEEEEEECGGGC
T ss_pred EEEEECCHhHhhhhhcc----cc-----CCCHHHHHHHhccCcEEEEEECCEEEEEEEEEc-CCCCEEEEEEEEECHHHc
Confidence 67999999999998544 11 12445554444 57888899999999999874 356789999999999999
Q ss_pred CCcHHHHHHHHHHhhhHHHHHHcCCcccCccceec---ccccccccCeeecC
Q 007903 527 GQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRG---RTHSYYRLKFNCSS 575 (585)
Q Consensus 527 GkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~---~a~~YYrlGF~~~~ 575 (585)
|+|+|++|+++++ +++++.|+.......... ....|.++||+..+
T Consensus 75 g~Gig~~ll~~~~----~~~~~~g~~~i~~~~~~~n~~a~~~y~k~Gf~~~~ 122 (157)
T 1y9k_A 75 GKGIGKKLLRHAV----ETAKGYGMSKLEVGTGNSSVSQLALYQKCGFRIFS 122 (157)
T ss_dssp SSSHHHHHHHHHH----HHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEEEE
T ss_pred CCCHHHHHHHHHH----HHHHHCCCCEEEEEeCCCCHHHHHHHHHCCCEEec
Confidence 9999999999999 888888887643322222 23345579999875
|
| >2r1i_A GCN5-related N-acetyltransferase; YP_831484.1, putative acetyltransferase, arthrobacter SP. FB acetyltransferase (GNAT) family; HET: MSE; 1.65A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.12 E-value=8.8e-11 Score=107.16 Aligned_cols=124 Identities=17% Similarity=0.085 Sum_probs=85.2
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHH----HHhcc--CeEEEEEECCeEEEEEEEeeec----cCCceEEee
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEE----LLKAL--DSFYVVEREGQIIACAALFPFF----KEKCGEVAA 518 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~----l~~~i--~~~~Va~~dg~IVG~~~l~~~~----~~~~aeI~~ 518 (585)
..||+++++|++.+.+++..........+.+.+. +...+ ..++++..+|++||++.+.... ..+.++|..
T Consensus 23 ~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~i~~ 102 (172)
T 2r1i_A 23 EVPRRATPADAATVAQMLHDFNTEFGAPTPGTDELASRLSHLLAGEDVVVLLAGEPPTGLAVLSFRPNVWYPGPVAILDE 102 (172)
T ss_dssp CCCEECCGGGHHHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHTTSSSEEEEEETTTTCEEEEEEEECCTTCSSCEEEEEE
T ss_pred eEEEECCHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHhcCCCeEEEEECCeeEEEEEEEeccCCCCCCceEEEEE
Confidence 5799999999999999987543322111222332 22222 2222222299999999987432 245789999
Q ss_pred EEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee--cccc-cccccCeeecCc
Q 007903 519 IGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR--GRTH-SYYRLKFNCSSK 576 (585)
Q Consensus 519 L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~--~~a~-~YYrlGF~~~~~ 576 (585)
++|+|+|||+|+|++|+++++ +++++.|+......... ..+. .|.++||+..+.
T Consensus 103 ~~v~p~~rg~Gig~~ll~~~~----~~a~~~g~~~i~~~~~~~n~~a~~~y~k~Gf~~~~~ 159 (172)
T 2r1i_A 103 LYVRPGRRGHRLGSALLAASC----GLVRSRGGALLEINVDGEDTDARRFYEARGFTNTEP 159 (172)
T ss_dssp EECCSSHHHHHHHHHHHHHHH----HHHHHTTCCEEEEEEETTCHHHHHHHHTTTCBSSCT
T ss_pred EEECcccccCCHHHHHHHHHH----HHHHHCCCCEEEEEEcCCCHHHHHHHHHCCCEeccc
Confidence 999999999999999999999 88888888764332221 2333 455899998755
|
| >3r1k_A Enhanced intracellular surviVal protein; GNAT, acetyltransferase, transferase; HET: COA; 1.95A {Mycobacterium tuberculosis} PDB: 3sxo_A 3ryo_A 3uy5_A | Back alignment and structure |
|---|
Probab=99.11 E-value=2.6e-10 Score=123.03 Aligned_cols=119 Identities=12% Similarity=0.076 Sum_probs=87.8
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHH---HHhcc--CeEEEEEEC----CeEEEEEEEeeecc---C----C
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEE---LLKAL--DSFYVVERE----GQIIACAALFPFFK---E----K 512 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~---l~~~i--~~~~Va~~d----g~IVG~~~l~~~~~---~----~ 512 (585)
++||+++++|++++.+|.... +..+++.+. +...+ ..+++++++ |++||++.+.+... + +
T Consensus 29 ~~IR~~~~~D~~~i~~L~~~~----F~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~g~lVG~~~~~~~~~~~~gg~~~~ 104 (428)
T 3r1k_A 29 VTLCSPTEDDWPGMFLLAAAS----FTDFIGPESATAWRTLVPTDGAVVVRDGAGPGSEVVGMALYMDLRLTVPGEVVLP 104 (428)
T ss_dssp CEEECCCGGGHHHHHHHHHHH----CTTCCCHHHHHHHGGGSCTTCEEEEECC----CCEEEEEEEEEEEEEETTTEEEE
T ss_pred eEEEECCHHHHHHHHHHHHHH----cCCCCChHHHHHHHhhcCCCcEEEEEecCCCCCcEEEEEEEEeeeeccCCCcccc
Confidence 689999999999999996543 333444433 22223 567888876 99999999875321 1 3
Q ss_pred ceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceeccc-ccccccCeeecCccc
Q 007903 513 CGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRT-HSYYRLKFNCSSKSF 578 (585)
Q Consensus 513 ~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a-~~YYrlGF~~~~~~~ 578 (585)
.++|..++|+|+|||+|||++||++++ +.+++.|+.... +.... ..|.|+||+..+...
T Consensus 105 ~~~I~~v~V~P~~Rg~Gig~~Ll~~~l----~~a~~~g~~~~~---L~~~a~~fY~r~GF~~~~~~~ 164 (428)
T 3r1k_A 105 TAGLSFVAVAPTHRRRGLLRAMCAELH----RRIADSGYPVAA---LHASEGGIYGRFGYGPATTLH 164 (428)
T ss_dssp EEEEEEEEECTTSCSSSHHHHHHHHHH----HHHHHTTCSEEE---EECSSTTSSGGGTCEECCEEE
T ss_pred eeEEEEEEECHHHcCCCHHHHHHHHHH----HHHHHCCCCEEE---EecCCHHHHHhCCCEEeeeEE
Confidence 578999999999999999999999999 999999876432 23333 455589999876543
|
| >3iwg_A Acetyltransferase, GNAT family; structural genomics, APC, PSI-2, protein structure initiativ midwest center for structural genomics; HET: MSE; 2.30A {Colwellia psychrerythraea} | Back alignment and structure |
|---|
Probab=99.11 E-value=1.4e-10 Score=118.08 Aligned_cols=128 Identities=10% Similarity=0.147 Sum_probs=90.8
Q ss_pred cccccccccccCHHHHHHHHHHHHHccccccCCHHHHHhcc--CeEEEEEECCeEEEEEEEeee--ccCCceEEeeEEEc
Q 007903 447 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--DSFYVVEREGQIIACAALFPF--FKEKCGEVAAIGVS 522 (585)
Q Consensus 447 ~~~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i--~~~~Va~~dg~IVG~~~l~~~--~~~~~aeI~~L~V~ 522 (585)
...+||+++++|++.+.+++...... ...|....+...+ ..+++++.+|++||++.+.+. .....+++ .++|+
T Consensus 139 ~~i~IR~a~~~D~~~i~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~va~~~g~iVG~~~~~~~~~~~~~~~~~-~l~V~ 215 (276)
T 3iwg_A 139 EMIDMQIAGTEQLTAFVTFAAANIGA--PEQWLTQYYGNLIERKELFGYWHKGKLLAAGECRLFDQYQTEYADL-GMIVA 215 (276)
T ss_dssp CCCCCEECCGGGHHHHHHHHHHHHCC--CHHHHHHHHHHHHHTTCEEEEEETTEEEEEEEEEECSSSCTTEEEE-EEEEC
T ss_pred CceEEEECCHHHHHHHHHHHHHhhcC--cHHHHHHHHHhhccCCeEEEEEECCEEEEEEEEEeccccCCcceEE-EEEEC
Confidence 34689999999999999997665443 2223222232322 568899999999999997641 22334444 59999
Q ss_pred cCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee--cccc-cccccCeeecCccccccc
Q 007903 523 PECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR--GRTH-SYYRLKFNCSSKSFHISL 582 (585)
Q Consensus 523 PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~--~~a~-~YYrlGF~~~~~~~~~~~ 582 (585)
|+|||+|+|++||++++ +++++.|+.... .... ..+. .|.++||+..+.-...++
T Consensus 216 p~~RGkGiG~~Ll~~l~----~~a~~~g~~~i~-~v~~~N~~A~~~YeklGF~~~~~l~~~~f 273 (276)
T 3iwg_A 216 QSNRGQGIAKKVLTFLT----KHAATQGLTSIC-STESNNVAAQKAIAHAGFTSAHRIVQFEF 273 (276)
T ss_dssp GGGTTSSHHHHHHHHHH----HHHHHTTCEEEE-EEETTCHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred HHHcCCCHHHHHHHHHH----HHHHHcCCCEEE-EEccCCHHHHHHHHHCCCEEeeEEEEEEe
Confidence 99999999999999999 999999987654 2221 2233 455799999876655554
|
| >2pc1_A Acetyltransferase, GNAT family; NP_688560.1, structural genom joint center for structural genomics, JCSG; HET: MSE; 1.28A {Streptococcus agalactiae 2603V} | Back alignment and structure |
|---|
Probab=99.10 E-value=1.9e-10 Score=108.99 Aligned_cols=123 Identities=15% Similarity=0.128 Sum_probs=85.6
Q ss_pred ccccccccccCHHHHHHHHHHHHHc---cccccC-------CHHHHHhcc--CeEEEEEECCeEEEEEEEeeecc-----
Q 007903 448 YEGTRTAKVTDLSGIKQIIQPLVES---GALVRR-------TDEELLKAL--DSFYVVEREGQIIACAALFPFFK----- 510 (585)
Q Consensus 448 ~~~IR~at~~D~~~I~~Li~~~~~~---~~~~~~-------~~e~l~~~i--~~~~Va~~dg~IVG~~~l~~~~~----- 510 (585)
...||+++++|++.+.+++...... ....+| +.+.+...+ ..++++..+|++||++.+.....
T Consensus 19 ~~~iR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~ 98 (201)
T 2pc1_A 19 GMQIRLAFPNEIDQIMLLIEEARAEIAKTGSDQWQKEDGYPNRNDIIDDILNGYAWVGIEDGMLATYAAVIDGHEEVYDA 98 (201)
T ss_dssp TEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCTTCSTTCSSCHHHHHHHHHHTCEEEEEETTEEEEEEEEEEECCGGGGG
T ss_pred CcEEEEcCHHHHHHHHHHHHHHHHHHHHhCCCCCccccCCCCHHHHHHHHhcCceEEEEECCeEEEEEEEecCCchhhcc
Confidence 3679999999999999997653311 111111 234444444 56777889999999999875321
Q ss_pred ----------CCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee--c-ccccccccCeeecCcc
Q 007903 511 ----------EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR--G-RTHSYYRLKFNCSSKS 577 (585)
Q Consensus 511 ----------~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~--~-~a~~YYrlGF~~~~~~ 577 (585)
.+.++|..++|+|+|||+|||++|+++++ + +.++....+.... . ....|.++||+..+..
T Consensus 99 ~~~g~w~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~----~---~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~ 171 (201)
T 2pc1_A 99 IYEGKWLHDNHRYLTFHRIAISNQFRGRGLAQTFLQGLI----E---GHKGPDFRCDTHEKNVTMQHILNKLGYQYCGKV 171 (201)
T ss_dssp CBSSCCSSCCSCEEEEEEEEECSTTCSSHHHHHHHHHHH----H---HSCCSEEEEEECTTCHHHHHHHHHTTCEEEEEE
T ss_pred ccccccccCCCcEEEEEEEEECHHHhCCCHHHHHHHHHH----H---hCCCceEEEEEecCCHHHHHHHHHCCCEEEEEE
Confidence 14677999999999999999999999999 5 6677654332221 1 3334558999987653
|
| >3h4q_A Putative acetyltransferase; NP_371943.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE P33; 2.50A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.10 E-value=4.3e-10 Score=105.00 Aligned_cols=123 Identities=15% Similarity=0.145 Sum_probs=86.5
Q ss_pred cccccccccCHHHHHHHHHHHHHcc--c-cccCC-----HHHHHhcc--CeEEEEEECCeEEEEEEEeeec---------
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESG--A-LVRRT-----DEELLKAL--DSFYVVEREGQIIACAALFPFF--------- 509 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~--~-~~~~~-----~e~l~~~i--~~~~Va~~dg~IVG~~~l~~~~--------- 509 (585)
.+||+++++|++.+.+++....... . ..+|. .+.+...+ ..++|++.+|++||++.+....
T Consensus 19 ~~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~~w 98 (188)
T 3h4q_A 19 GMIRLGKMSDLDQILNLVEEAKELMKEHDNEQWDDQYPLLEHFEEDIAKDYLYVLEENDKIYGFIVVDQDQAEWYDDIDW 98 (188)
T ss_dssp CCEEECCGGGHHHHHHHHHHHHHHTC----------CCHHHHHHHHHHTTCEEEEEETTEEEEEEEEESCCCGGGGGSCC
T ss_pred EEEEecCHhhHHHHHHHHHHHHHHHHhccccccccCCCcHHHHHHhhccCcEEEEEECCEEEEEEEEEccCccccccccc
Confidence 6899999999999999987652211 1 12232 34444444 5788999999999999996421
Q ss_pred ---cCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccce--ecccc-cccccCeeecCcc
Q 007903 510 ---KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFL--RGRTH-SYYRLKFNCSSKS 577 (585)
Q Consensus 510 ---~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~--~~~a~-~YYrlGF~~~~~~ 577 (585)
....++|..++|+|+| +|||++||++++ +++++.|+....+... +..+. .|.++||+..+..
T Consensus 99 ~~~~~~~~~i~~l~V~p~~--~Gig~~Ll~~~~----~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~ 166 (188)
T 3h4q_A 99 PVNREGAFVIHRLTGSKEY--KGAATELFNYVI----DVVKARGAEVILTDTFALNKPAQGLFAKFGFHKVGEQ 166 (188)
T ss_dssp SSCCTTCEEEEEEECCSSC--TTHHHHHHHHHH----HHHHHTTCCEEEEEGGGSCGGGTHHHHHTTCEEC---
T ss_pred ccCCCCeEEEEEEEECCcc--CcHHHHHHHHHH----HHHHHcCCCEEEEEEecCCHHHHHHHHHCCCeEeceE
Confidence 1355789999999999 999999999999 8899988876533221 22344 4557999988653
|
| >3ld2_A SMU.2055, putative acetyltransferase; HET: COA; 2.50A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.09 E-value=2.2e-10 Score=108.01 Aligned_cols=123 Identities=14% Similarity=0.216 Sum_probs=89.6
Q ss_pred cccccccccCHHHHHHHHHHHHHccc----cccCCHHHHHhcc---CeEEEEEECCeEEEEEEEeee---ccCCceEEee
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGA----LVRRTDEELLKAL---DSFYVVEREGQIIACAALFPF---FKEKCGEVAA 518 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~----~~~~~~e~l~~~i---~~~~Va~~dg~IVG~~~l~~~---~~~~~aeI~~ 518 (585)
..||+++++|++.+.+++........ ...+..+.+...+ ..+++++.+|++||++.+.+. ...+...+..
T Consensus 35 i~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~~~~~ 114 (197)
T 3ld2_A 35 MKISPMLLSDIEQVVELENKTWSEQNTPVPLPVASKDQIIQKFESNTHFLVAKIKDKIVGVLDYSSLYPFPSGQHIVTFG 114 (197)
T ss_dssp EEEEECCGGGHHHHHHHHHHHCCTTTCCSCSCCCCHHHHHHHHTTTCEEEEEEESSCEEEEEEEEESCSSGGGTTEEEEE
T ss_pred EEEEeCCHHHHHHHHHHHHHhccccCCCCccccccHHHHHHhhCCCCeEEEEEeCCCEEEEEEEEeccCCCCCCeEEEEE
Confidence 57999999999999999765443222 1124556555544 578889999999999999753 2345677889
Q ss_pred EEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee--ccc-ccccccCeeecCc
Q 007903 519 IGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR--GRT-HSYYRLKFNCSSK 576 (585)
Q Consensus 519 L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~--~~a-~~YYrlGF~~~~~ 576 (585)
++|+|+|||+|||++|+++++ +++++. +....+.... ..+ ..|.++||+..+.
T Consensus 115 ~~V~p~~rg~Gig~~ll~~~~----~~a~~~-~~~i~l~v~~~N~~a~~~y~k~GF~~~~~ 170 (197)
T 3ld2_A 115 IAVAEKERRKGIGRALVQIFL----NEVKSD-YQKVLIHVLSSNQEAVLFYKKLGFDLEAR 170 (197)
T ss_dssp EEECGGGTTSSHHHHHHHHHH----HHHTTT-CSEEEEEEETTCHHHHHHHHHTTCEEEEE
T ss_pred EEEcHHHcCCCHHHHHHHHHH----HHHHHH-HHeEEEEeeCCCHHHHHHHHHCCCEEeee
Confidence 999999999999999999999 888777 6554322211 223 3455799998764
|
| >2jlm_A Putative phosphinothricin N-acetyltransferase; methionine sulfoximine; 2.35A {Acinetobacter baylyi} | Back alignment and structure |
|---|
Probab=99.09 E-value=2.7e-10 Score=107.08 Aligned_cols=123 Identities=14% Similarity=0.078 Sum_probs=85.2
Q ss_pred cccccccccCHHHHHHHHHHHHHccc----cccCCHHHHHhcc-------CeEEEE-EECCeEEEEEEEeeecc----CC
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGA----LVRRTDEELLKAL-------DSFYVV-EREGQIIACAALFPFFK----EK 512 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~----~~~~~~e~l~~~i-------~~~~Va-~~dg~IVG~~~l~~~~~----~~ 512 (585)
+.||+++++|++.+.++......... ..+++.+.+...+ ..++++ +.+|++||++.+..... ..
T Consensus 11 ~~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~iiG~~~~~~~~~~~~~~~ 90 (182)
T 2jlm_A 11 RFVECTEDQHALEILEILNDAIINSTALYDYKPRSKESMAAWFATKRQNNFPIIGAVNEVGQLLGFASWGSFRAFPAYKY 90 (182)
T ss_dssp EEEECCHHHHHHHHHHHHHHHHHHCSSSCCSSCCCHHHHHHHHHHHHHTTCCEEEEEETTSCEEEEEEEEESSSSGGGTT
T ss_pred EEEEeCCHHHHHHHHHHHHHHHhcceeeccCCCCCHHHHHHHHHhccccCceEEEEEccCCcEEEEEEecccCCcccccc
Confidence 57999999999999999765543221 1233444322211 346676 67899999999874321 12
Q ss_pred ceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccce--ecc-cccccccCeeecCc
Q 007903 513 CGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFL--RGR-THSYYRLKFNCSSK 576 (585)
Q Consensus 513 ~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~--~~~-a~~YYrlGF~~~~~ 576 (585)
.+++ .++|+|+|||+|||++|++.++ ++++++|+........ +.. .+.|.|+||+..+.
T Consensus 91 ~~e~-~~~v~p~~rg~Gig~~ll~~~~----~~a~~~g~~~i~l~v~~~N~~a~~~yek~GF~~~g~ 152 (182)
T 2jlm_A 91 TVEH-SVYIHKDYRGLGLSKHLMNELI----KRAVESEVHVMVGCIDATNVASIQLHQKLGFIHSGT 152 (182)
T ss_dssp EEEE-EEEECTTSTTSSHHHHHHHHHH----HHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEEEE
T ss_pred eeEE-EEEEChhhcCCCHHHHHHHHHH----HHHHHCCceEEEEEEeCCCHHHHHHHHHCCCcEEEE
Confidence 3444 6999999999999999999999 8888889887544332 223 34455899998754
|
| >2fl4_A Spermine/spermidine acetyltransferase; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Enterococcus faecalis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.09 E-value=6.4e-11 Score=107.84 Aligned_cols=122 Identities=11% Similarity=0.038 Sum_probs=80.7
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHHhc----cCeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccC
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKA----LDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPE 524 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~----i~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~Pe 524 (585)
..||+++++|++.+.++........+..++ ...+... -...+++..++++||++.+... .....+|..++|+|+
T Consensus 4 l~ir~~~~~D~~~i~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~iG~~~~~~~-~~~~~~i~~~~v~~~ 81 (149)
T 2fl4_A 4 IHFEKVTSDNRKAVENLQVFAEQQAFIESM-AENLKESDQFPEWESAGIYDGNQLIGYAMYGRW-QDGRVWLDRFLIDQR 81 (149)
T ss_dssp CCCCCCCTTTHHHHHTCCCTTCHHHHHHHH-HHHHHHHHHCTTEEEEEEEETTEEEEEEEEEEC-TTSCEEEEEEEECGG
T ss_pred EEEEECCHHHHHHHHhhcCCHHHHhccCCH-HHHHHHHhcCcccceEEEEECCeEEEEEEEeec-CCCcEEEEEEEECHH
Confidence 469999999999999884321111111110 1112111 1245677789999999887632 245678999999999
Q ss_pred CcCCcHHHHHHHHHHhhhHHHHHHc-CCcccCccce--ecccc-cccccCeeecCc
Q 007903 525 CRGQGQGDKLLGLCIWPLLSETRYD-HISTNGFPFL--RGRTH-SYYRLKFNCSSK 576 (585)
Q Consensus 525 yRGkGIGk~LL~~~~~~a~~~A~~~-gi~~~g~~~~--~~~a~-~YYrlGF~~~~~ 576 (585)
|||+|+|++|++.++ +++.+. ++....+... +..+. .|.++||+..+.
T Consensus 82 ~~g~Gig~~ll~~~~----~~~~~~~~~~~i~l~v~~~N~~a~~~Y~k~GF~~~g~ 133 (149)
T 2fl4_A 82 FQGQGYGKAACRLLM----LKLIEKYQTNKLYLSVYDTNSSAIRLYQQLGFVFNGE 133 (149)
T ss_dssp GTTSSHHHHHHHHHH----HHHHHHSSCSEEEEEECTTCHHHHHHHHHTTCEEEEE
T ss_pred HcCCCHHHHHHHHHH----HHHHHhCCCCEEEEEEECCCHHHHHHHHHCCCEEecc
Confidence 999999999999999 777764 5765433222 22334 455799998754
|
| >2d4p_A Hypothetical protein TTHA1254; structural genomics, NPPSFA, national project on protein STR and functional analyses; 1.70A {Thermus thermophilus} SCOP: d.108.1.1 PDB: 2d4o_A | Back alignment and structure |
|---|
Probab=99.08 E-value=1.5e-10 Score=105.62 Aligned_cols=115 Identities=11% Similarity=0.035 Sum_probs=89.2
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHH--hccCeEEEEEECCeEEEEEEEeeec--cCCceEEeeEEEccC
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELL--KALDSFYVVEREGQIIACAALFPFF--KEKCGEVAAIGVSPE 524 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~--~~i~~~~Va~~dg~IVG~~~l~~~~--~~~~aeI~~L~V~Pe 524 (585)
++||+++++|++++.+|+.. +. .+.+.+. ..-..+||++.+|++|||+.+++.. +.+.+.|.+++
T Consensus 1 m~IR~a~~~D~~~l~~L~~~---~~----~~~~~L~~~~~~~~~fVAe~~g~ivG~v~l~~~i~gdg~~~~L~dl~---- 69 (141)
T 2d4p_A 1 MRFRPFTEEDLDRLNRLAGK---RP----VSLGALRFFARTGHSFLAEEGEEPMGFALAQAVWQGEATTVLVTRIE---- 69 (141)
T ss_dssp CEEECCCGGGHHHHHHTSTT---SC----CCHHHHHHHHHHSCCEEEEETTEEEEEEEEEEEECSSSEEEEEEEEE----
T ss_pred CeEEECCHHHHHHHHHHHcc---Cc----chHHHHHhcCCCCeEEEEEECCEEEEEEeeeeEEEcCCeEEEEeHHh----
Confidence 36999999999999999543 11 3455555 5558899999999999999887533 34567888888
Q ss_pred CcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccc--eeccccccc-ccCeeecCccc
Q 007903 525 CRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPF--LRGRTHSYY-RLKFNCSSKSF 578 (585)
Q Consensus 525 yRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~--~~~~a~~YY-rlGF~~~~~~~ 578 (585)
|||+|||+.||++++ ++|++.|+.+..+.. .+..++.|| ++||...+..+
T Consensus 70 ~R~~GIG~~Ll~~a~----~~a~~~G~~rv~L~~~~~N~~a~~fye~~Gf~~~~~~~ 122 (141)
T 2d4p_A 70 GRSVEALRGLLRAVV----KSAYDAGVYEVALHLDPERKELEEALKAEGFALGPLVL 122 (141)
T ss_dssp ESSHHHHHHHHHHHH----HHHHHTTCSEEEECCCTTCHHHHHHHHHTTCCCCSSCC
T ss_pred hccccHHHHHHHHHH----HHHHHCCCCEEEEEecccCHHHHHHHHHCCCEecCcEE
Confidence 999999999999999 999999999865422 234455666 69999887444
|
| >3d3s_A L-2,4-diaminobutyric acid acetyltransferase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: MSE; 1.87A {Bordetella parapertussis 12822} | Back alignment and structure |
|---|
Probab=99.07 E-value=5.5e-11 Score=111.78 Aligned_cols=122 Identities=15% Similarity=0.110 Sum_probs=82.9
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHH-hccCeEEEEEE-CCeEEEEEEEeeec-cCCceEEeeEEEccCC
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELL-KALDSFYVVER-EGQIIACAALFPFF-KEKCGEVAAIGVSPEC 525 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~-~~i~~~~Va~~-dg~IVG~~~l~~~~-~~~~aeI~~L~V~Pey 525 (585)
..||+++++|++.+.+++...........+....+. ..-..+++++. +|++||++.+.... ....++|..++|+|+|
T Consensus 27 ~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~i~~l~V~p~~ 106 (189)
T 3d3s_A 27 YHLRPPRRNDGAAIHQLVSECPPLDLNSLYAYLLLCEHHAHTCVVAESPGGRIDGFVSAYLLPTRPDVLFVWQVAVHSRA 106 (189)
T ss_dssp CEEECCCGGGHHHHHHHHHTSTTSCCCCHHHHHHHHHHCGGGCEEEECTTSCEEEEEEEEECSSCTTEEEEEEEEECGGG
T ss_pred EEEEECChhHHHHHHHHHHHccccCchhhHHHHHhccCCCceEEEEECCCCEEEEEEEEEEcCCCCCceEEEEEEECHHH
Confidence 579999999999999996442111100000111111 11245678888 99999999987542 2356899999999999
Q ss_pred cCCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee--cccc-cccccCeeec
Q 007903 526 RGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR--GRTH-SYYRLKFNCS 574 (585)
Q Consensus 526 RGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~--~~a~-~YYrlGF~~~ 574 (585)
||+|||++|+++++ +++++.|+....+.... ..+. .|.++||+..
T Consensus 107 rg~Gig~~Ll~~~~----~~a~~~g~~~i~l~v~~~N~~a~~~y~k~Gf~~~ 154 (189)
T 3d3s_A 107 RGHRLGRAMLGHIL----ERQECRHVRHLETTVGPDNQASRRTFAGLAGERG 154 (189)
T ss_dssp TTSCHHHHHHHHHH----HSGGGTTCCEEEEEECTTCHHHHHHHHHHHHTTT
T ss_pred cCCCHHHHHHHHHH----HHHHHCCCCEEEEEEecCcHHHHHHHHHcCCccc
Confidence 99999999999999 88888888764332221 1233 4557999754
|
| >1z4r_A General control of amino acid synthesis protein 5-like 2; GCN5, acetyltransferase, SGC, structural genomics, structural genomics consortium; HET: ACO; 1.74A {Homo sapiens} SCOP: d.108.1.1 PDB: 1cm0_B* | Back alignment and structure |
|---|
Probab=99.07 E-value=8.3e-10 Score=101.45 Aligned_cols=119 Identities=14% Similarity=0.135 Sum_probs=83.7
Q ss_pred cccccccCHHHHHHHHHHHHHccccccCCHHHHHhcc----CeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCCc
Q 007903 451 TRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECR 526 (585)
Q Consensus 451 IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i----~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyR 526 (585)
..+++++|++.+.++....... . .....+.+...+ ..++++..+|++||++.+.........+|..++|+|+||
T Consensus 15 ~~~~~~~d~~~l~~l~~~f~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~i~~~~v~~~~r 92 (168)
T 1z4r_A 15 TPKANRRVLLWLVGLQNVFSHQ-L-PRMPKEYIARLVFDPKHKTLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTSNEQ 92 (168)
T ss_dssp CTTSCHHHHHHHHHHHHHHHHH-C-TTSCHHHHHHHHTCTTCEEEEEEETTEEEEEEEEEEETTTTEEEEEEEEECGGGC
T ss_pred CCCCchhHHHHHHHHHHhccCc-C-ccccHHHHHHHHhCCCcEEEEEEECCEEEEEEEEEEecCCCceEEEEEEECHHHh
Confidence 3567888999998885222211 1 122333333322 567888899999999998765555568999999999999
Q ss_pred CCcHHHHHHHHHHhhhHHHHHHcCCcccCccceeccccccc-ccCeeecCc
Q 007903 527 GQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYY-RLKFNCSSK 576 (585)
Q Consensus 527 GkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YY-rlGF~~~~~ 576 (585)
|+|+|++|+++++ +++++.++.... ......+..|| ++||+..+.
T Consensus 93 g~Gig~~ll~~~~----~~~~~~g~~~~~-~~~~~~a~~~y~k~GF~~~~~ 138 (168)
T 1z4r_A 93 VKGYGTHLMNHLK----EYHIKHNILYFL-TYADEYAIGYFKKQGFSKDIK 138 (168)
T ss_dssp SSSHHHHHHHHHH----HHHHHTTCCEEE-EEECGGGHHHHHHTTEESCCC
T ss_pred CCCHHHHHHHHHH----HHHHHcCCcEEE-EeCChHHHHHHHHCCCcEeec
Confidence 9999999999999 888888887542 22223444455 799998653
|
| >3g8w_A Lactococcal prophage PS3 protein 05; APC61042, acetyltransferase, staphylococcus epidermidis ATCC structural genomics; HET: NHE FLC; 2.70A {Staphylococcus epidermidis atcc 12228} | Back alignment and structure |
|---|
Probab=99.07 E-value=1.6e-10 Score=105.57 Aligned_cols=124 Identities=12% Similarity=0.059 Sum_probs=86.3
Q ss_pred cccccccccccCHHHHHHHHHHHHHccc-----cccCCHHHHHhcc----C--eEEEEEECCeEEEEEEEeeecc---CC
Q 007903 447 LYEGTRTAKVTDLSGIKQIIQPLVESGA-----LVRRTDEELLKAL----D--SFYVVEREGQIIACAALFPFFK---EK 512 (585)
Q Consensus 447 ~~~~IR~at~~D~~~I~~Li~~~~~~~~-----~~~~~~e~l~~~i----~--~~~Va~~dg~IVG~~~l~~~~~---~~ 512 (585)
..+.||+++++|++.+.++......... ......+.+...+ . .+++++.++++||++.+..... ..
T Consensus 3 ~~~~iR~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~ 82 (169)
T 3g8w_A 3 AMNNIRLLNQNDLDSYIELMKFGHHNYEWDRYYLENVSIDRLKTILSNHTDYWNIFGAFEDDELVATCTLKQMNYVGKCH 82 (169)
T ss_dssp -CCCEEECCGGGHHHHHHHHHTCCCTTCHHHHHHHHCCHHHHHHHHSTTCTTEEEEEEESSSCEEEEEEEEECCSTTTTT
T ss_pred cceEEEecChHHHHHHHHHHHHhhhhcccCCccccccCHHHHHHHhCCCCcceEEEEEEECCEEEEEEEEEeccccccCc
Confidence 3468999999999999998543221110 0112233333333 1 5788889999999999875322 25
Q ss_pred ceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee--cccc-cccccCeeecCc
Q 007903 513 CGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR--GRTH-SYYRLKFNCSSK 576 (585)
Q Consensus 513 ~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~--~~a~-~YYrlGF~~~~~ 576 (585)
.++|..++|+| ||+|||++||++++ +++++.|+....+.... ..+. .|.++||+..+.
T Consensus 83 ~~~i~~~~v~~--rg~Gig~~ll~~~~----~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~g~ 143 (169)
T 3g8w_A 83 KAILENNFVKN--NDEIVNRELINHII----QYAKEQNIETLMIAIASNNISAKVFFSSIGFENLAF 143 (169)
T ss_dssp EEEEEEEEEGG--GCHHHHHHHHHHHH----HHHHHTTCCEEEEEEETTCHHHHHHHHTTTCEEEEE
T ss_pred eEEEEEEEEcc--CCCcHHHHHHHHHH----HHHHHCCCCEEEEEEecCCHHHHHHHHHcCCEEeee
Confidence 78999999999 99999999999999 88988888775432222 2333 455899997654
|
| >4fd5_A Arylalkylamine N-acetyltransferase 2; GNAT; 1.64A {Aedes aegypti} PDB: 4fd6_A | Back alignment and structure |
|---|
Probab=99.06 E-value=2e-10 Score=111.40 Aligned_cols=124 Identities=13% Similarity=0.056 Sum_probs=83.0
Q ss_pred cccccccccCHHHHHHHHHHHHHcc--------cc-ccCCHHHHHh----cc--CeEEEEEE-CCeEEEEEEEeeec---
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESG--------AL-VRRTDEELLK----AL--DSFYVVER-EGQIIACAALFPFF--- 509 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~--------~~-~~~~~e~l~~----~i--~~~~Va~~-dg~IVG~~~l~~~~--- 509 (585)
..||+++++|++++.+++....... .. .+...+.+.. .+ ...+++.+ +|+|||++...+..
T Consensus 9 ~~iR~a~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~g~ivG~~~~~~~~~~~ 88 (222)
T 4fd5_A 9 IRFETISSKYYDDVIEHLRQTFFADEPLNKAVNLTRPGQGHPLLEQHSLSTLKDNVSIMAISNDGDIAGVALNGILYGNT 88 (222)
T ss_dssp CEEEECCGGGHHHHHHHHHHHTTTTSHHHHHTTCCCTTTCCHHHHHHHHHHHTTSCCEEEECTTSCEEEEEEEEEEETTS
T ss_pred EEEEECCHHHHHHHHHHHHHhcCCCCccchhhcccCCCcccHHHHHHHHHHHhCCcEEEEEeCCCCEEEEEEeccccCCc
Confidence 5799999999999999975432110 00 0111122221 12 34455555 89999999876432
Q ss_pred --------------------------------------cCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCC
Q 007903 510 --------------------------------------KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHI 551 (585)
Q Consensus 510 --------------------------------------~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi 551 (585)
.+...+|..++|+|+|||+|||++|+++++ +.+++.|+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~rg~Gig~~l~~~~~----~~~~~~g~ 164 (222)
T 4fd5_A 89 DIEKSREKLNEIQDESFKKIFKLLYEQNLKINLFKQFDVDKIFEIRILSVDSRFRGKGLAKKLIEKSE----ELALDRGF 164 (222)
T ss_dssp CTTHHHHHHHHCCCHHHHHHHHHHHHHHTTCCHHHHHTCSEEEEEEEEEECGGGTTSSHHHHHHHHHH----HHHHHTTC
T ss_pred cHHHHHHHHhhccChhHHHHHHHHHHHHhhcchhhhcCCCcEEEEEEEEECHHHcCCCHHHHHHHHHH----HHHHHCCC
Confidence 034678999999999999999999999999 88999998
Q ss_pred cccCccceeccc-ccccccCeeecCc
Q 007903 552 STNGFPFLRGRT-HSYYRLKFNCSSK 576 (585)
Q Consensus 552 ~~~g~~~~~~~a-~~YYrlGF~~~~~ 576 (585)
...........+ ..|.++||+..+.
T Consensus 165 ~~~~~~~~~~~~~~~y~~~Gf~~~~~ 190 (222)
T 4fd5_A 165 QVMKTDATGAFSQRVVSSLGFITKCE 190 (222)
T ss_dssp CEEEEEECSHHHHHHHHHTTCEEEEE
T ss_pred CEEEEEeCCHHHHHHHHHCCCEEEEE
Confidence 753222112233 3455799998754
|
| >2bue_A AAC(6')-IB; GNAT, transferase, aminoglycoside, fluoroquinolone, acetyltransferase, antibiotic resistance; HET: COA RIO; 1.7A {Escherichia coli} PDB: 1v0c_A* 2vqy_A* 2prb_A* 2qir_A* 2pr8_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=5e-10 Score=105.06 Aligned_cols=124 Identities=14% Similarity=0.081 Sum_probs=87.0
Q ss_pred cccccccccCHHHHHHHHHHHHHcccc----ccCCHHHHHh-cc--------CeEEEEEECCeEEEEEEEeee-------
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGAL----VRRTDEELLK-AL--------DSFYVVEREGQIIACAALFPF------- 508 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~----~~~~~e~l~~-~i--------~~~~Va~~dg~IVG~~~l~~~------- 508 (585)
..||+++++|++.+.+++.......+. .+.+.++... .+ ..+++++.+|++||++.+...
T Consensus 26 i~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~ 105 (202)
T 2bue_A 26 VTLRLMTEHDLAMLYEWLNRSHIVEWWGGEEARPTLADVQEQYLPSVLAQESVTPYIAMLNGEPIGYAQSYVALGSGDGW 105 (202)
T ss_dssp EEEEECCGGGHHHHHHHHTSHHHHTTSCGGGCSCCHHHHHHHHCHHHHHTTTEEEEEEEETTEEEEEEEEEEGGGCCTTS
T ss_pred EEEEECCHHHHHHHHHHHcCchhhhhcCCCcccccHHHHHHHHHHhhcCCCCceeEEEEECCEEEEEEEEEEeccccccc
Confidence 679999999999999997644322221 1123332221 11 367888899999999998742
Q ss_pred ----ccCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHH-cCCcccCccce--e-cccccccccCeeecCc
Q 007903 509 ----FKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRY-DHISTNGFPFL--R-GRTHSYYRLKFNCSSK 576 (585)
Q Consensus 509 ----~~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~-~gi~~~g~~~~--~-~~a~~YYrlGF~~~~~ 576 (585)
.....++|..++|+|+|||+|||++|++.++ +++++ .++........ + .....|.++||+..+.
T Consensus 106 ~~~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~----~~a~~~~g~~~i~~~v~~~N~~a~~~y~k~GF~~~~~ 177 (202)
T 2bue_A 106 WEEETDPGVRGIDQLLANASQLGKGLGTKLVRALV----ELLFNDPEVTKIQTDPSPSNLRAIRCYEKAGFERQGT 177 (202)
T ss_dssp STTCCCTTEEEEEEEESCGGGTTSSHHHHHHHHHH----HHHHTSTTCCEEEECCCTTCHHHHHHHHHTTCEEEEE
T ss_pred ccccCCCCceEEEEEEEChhhccCChHHHHHHHHH----HHHHhCCCCcEEEeCcccCCHHHHHHHHHcCCEEeee
Confidence 1245789999999999999999999999999 88887 48776433221 1 2333455899997754
|
| >1qst_A TGCN5 histone acetyl transferase; GCN5-related N-acetyltransferase, COA binding protein; HET: EPE; 1.70A {Tetrahymena thermophila} SCOP: d.108.1.1 PDB: 1m1d_A* 1pu9_A* 1pua_A* 5gcn_A* 1qsr_A* 1q2d_A* 1q2c_A* 1qsn_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=5.2e-10 Score=102.25 Aligned_cols=120 Identities=13% Similarity=0.138 Sum_probs=80.2
Q ss_pred ccccccccCHHHHHHHHHHH---HHccccccCCHHHHHhcc-----CeEEEEEECCeEEEEEEEeeeccCCceEEeeEEE
Q 007903 450 GTRTAKVTDLSGIKQIIQPL---VESGALVRRTDEELLKAL-----DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGV 521 (585)
Q Consensus 450 ~IR~at~~D~~~I~~Li~~~---~~~~~~~~~~~e~l~~~i-----~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V 521 (585)
+||.++.+|.+.....+... .... ..+++.+.+...+ ..+++++.++++||++.+.+......++|..++|
T Consensus 2 ~~r~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~i~~~~v 80 (160)
T 1qst_A 2 DFDILTNDGTHRNMKLLIDLKNIFSRQ-LPKMPKEYIVKLVFDRHHESMVILKNKQKVIGGICFRQYKPQRFAEVAFLAV 80 (160)
T ss_dssp EEEEECCCSCHHHHHHHHHHHHHHHHH-CTTSCHHHHHHHHTSSSEEEEEEEETTTEEEEEEEEEEEGGGTEEEEEEEEE
T ss_pred ceEEecCCcchHHHHHHHHHHHHhhhh-cchhHHHHHHHHhhCCCCceEEEEecCCEEEEEEEEEEecCCCeEEEEEEEE
Confidence 46666766544444433221 1111 2334555444332 3466777788999999998655556688999999
Q ss_pred ccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceeccccc-ccccCeeecC
Q 007903 522 SPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHS-YYRLKFNCSS 575 (585)
Q Consensus 522 ~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~-YYrlGF~~~~ 575 (585)
+|+|||+|+|++|+++++ +++++.|+........+ .+.. |.++||...+
T Consensus 81 ~~~~rg~Gig~~ll~~~~----~~~~~~g~~~l~~~~~n-~a~~~y~k~Gf~~~~ 130 (160)
T 1qst_A 81 TANEQVRGYGTRLMNKFK----DHMQKQNIEYLLTYADN-FAIGYFKKQGFTKEH 130 (160)
T ss_dssp CGGGCSSSHHHHHHHHHH----HHHHHTTCCEEEEEECS-SSHHHHHHTTCBSSC
T ss_pred CHHHcCCCHHHHHHHHHH----HHHHHCCCcEEEEeCcc-hhHHHHHHCCCEEee
Confidence 999999999999999999 88888888764322122 3444 4479999774
|
| >3n7z_A Acetyltransferase, GNAT family; PSI2, MCSG, structural genomics, protein structure initiativ midwest center for structural genomics; 2.75A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.05 E-value=4e-10 Score=119.52 Aligned_cols=119 Identities=17% Similarity=0.229 Sum_probs=88.7
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHHhcc------CeEEEEEECCeEEEEEEEeeecc------CCceEE
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL------DSFYVVEREGQIIACAALFPFFK------EKCGEV 516 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i------~~~~Va~~dg~IVG~~~l~~~~~------~~~aeI 516 (585)
++||+++++|++++.+|+... +..+++.+.+...+ ..+++++.+|++||++.+.++.. .+.++|
T Consensus 4 ~~iR~~~~~D~~~i~~L~~~~----f~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~lvG~~~~~~~~~~~~~~~~~~~~i 79 (388)
T 3n7z_A 4 MNVIRLKEDKFREALRLSEYA----FQYKVDEDRLQQQITKMKESHEVYGIMEGENLAAKLHLIPFHIYIGKEKFKMGGV 79 (388)
T ss_dssp CCEEECCGGGHHHHHHHHHHH----TTCCCCHHHHHHHHHHHHHHCEEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEE
T ss_pred eEEEECCHHHHHHHHHHHHHh----CCCCCChHHHHHHHHhhcCcccEEEEEECCEEEEEEEEEeEEEEECCEEEEeeEE
Confidence 579999999999999995443 22244544433221 67899999999999999765321 135789
Q ss_pred eeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceeccccccc-ccCeeecCccc
Q 007903 517 AAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYY-RLKFNCSSKSF 578 (585)
Q Consensus 517 ~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YY-rlGF~~~~~~~ 578 (585)
..++|+|+|||+|+|++||++++ +.+++.|+....+. .....|| ++||...+...
T Consensus 80 ~~v~V~p~~Rg~Gig~~Ll~~~~----~~~~~~g~~~~~l~---~~a~~~Y~~~Gf~~~~~~~ 135 (388)
T 3n7z_A 80 AGVATYPEYRRSGYVKELLQHSL----QTMKKDGYTVSMLH---PFAVSFYRKYGWELCANLL 135 (388)
T ss_dssp EEEEECGGGGGGCHHHHHHHHHH----HHHHHHTCCEEEEC---CSCHHHHHTTTCEEEEEEE
T ss_pred EEEEECHHHCCCChHHHHHHHHH----HHHHHCCCcEEEEc---cCChhhhhhcCcEEeccEE
Confidence 99999999999999999999999 88888887654322 3444455 79999876543
|
| >2g3a_A Acetyltransferase; structural genomics, PSI, protein structu initiative, midwest center for structural genomics, MCSG; 1.90A {Agrobacterium tumefaciens str} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.04 E-value=2e-10 Score=103.66 Aligned_cols=116 Identities=19% Similarity=0.125 Sum_probs=81.2
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHH--hccCeEE-EEEECCeEEEEEEEeeeccCCceEEeeEEEccCC
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELL--KALDSFY-VVEREGQIIACAALFPFFKEKCGEVAAIGVSPEC 525 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~--~~i~~~~-Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~Pey 525 (585)
+.||.+++.|.+.+.++...+.... .+.+. ......+ +.+.+|++||++.+.. ....++|..++|+|+|
T Consensus 16 m~ir~~~~~d~~~~~~l~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~--~~~~~~i~~~~v~p~~ 87 (152)
T 2g3a_A 16 MNFVLSDVADAEAEKAIRDPLVAYN------LARFGESDKRDLNITIRNDDNSVTGGLVGHT--ARGWLYVQLLFVPEAM 87 (152)
T ss_dssp CCCCCCCSCCHHHHHHHHHHHHHHH------HHHHCCCCCEEEEEEEECTTCCEEEEEEEEE--ETTEEEEEEEECCGGG
T ss_pred CeEEEecCCCHHHHHHHHHHHHHhh------hhhcCCCCccceEEEEEeCCCeEEEEEEEEE--eCCEEEEEEEEECHHH
Confidence 5789999999998888855433211 11111 1112333 4444899999998874 4568999999999999
Q ss_pred cCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceecccc-cccccCeeecCc
Q 007903 526 RGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTH-SYYRLKFNCSSK 576 (585)
Q Consensus 526 RGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~-~YYrlGF~~~~~ 576 (585)
||+|+|++|+++++ +++++.|+........+..+. .|.++||+..+.
T Consensus 88 rg~Gig~~ll~~~~----~~~~~~g~~~i~l~~~n~~a~~~y~k~GF~~~~~ 135 (152)
T 2g3a_A 88 RGQGIAPKLLAMAE----EEARKRGCMGAYIDTMNPDALRTYERYGFTKIGS 135 (152)
T ss_dssp CSSSHHHHHHHHHH----HHHHHTTCCEEEEEESCHHHHHHHHHHTCEEEEE
T ss_pred cCCCHHHHHHHHHH----HHHHHCCCCEEEEEecCccHHHHHHHCCCEEeee
Confidence 99999999999999 888888887643332222333 455799998754
|
| >3te4_A GH12636P, dopamine N acetyltransferase, isoform A; dopamine/acetyl COA, N-acetyltransferase domain; HET: ACO; 1.46A {Drosophila melanogaster} PDB: 3v8i_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=2.9e-10 Score=109.79 Aligned_cols=124 Identities=15% Similarity=0.107 Sum_probs=82.2
Q ss_pred cccccccccCHHHHHHHHHHHHH-cc-c----cccCC---HHHHHhcc--CeEEEEE-ECCeEEEEEEEeeec-------
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVE-SG-A----LVRRT---DEELLKAL--DSFYVVE-REGQIIACAALFPFF------- 509 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~-~~-~----~~~~~---~e~l~~~i--~~~~Va~-~dg~IVG~~~l~~~~------- 509 (585)
.+||+++++|++++.+++..... .. . ..... .+.+...+ ...+++. .+|+|||++...+..
T Consensus 7 ~~iR~a~~~D~~~i~~~~~~~f~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~g~ivG~~~~~~~~~~~~~~~ 86 (215)
T 3te4_A 7 YTIELIQPEDGEAVIAMLKTFFFKDEPLNTFLDLGECKELEKYSLKPLPDNCSYKAVNKKGEIIGVFLNGLMRRPSPDDV 86 (215)
T ss_dssp EEEEECCGGGHHHHHHHHHHTHHHHSHHHHHHTCCSCHHHHHHHHTTGGGSCCEEEEETTSCEEEEEEEEEEECCCTTCC
T ss_pred EEEEECCHHHHHHHHHHHHHhcCCCCCchhhcCCCCchHHHHHHHHHHhCCcEEEEEcCCCcEEEEEecccccCcchhhH
Confidence 57999999999999998654321 11 0 00101 11112222 3445554 689999998765321
Q ss_pred ----------------------------------cCC-ceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCccc
Q 007903 510 ----------------------------------KEK-CGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTN 554 (585)
Q Consensus 510 ----------------------------------~~~-~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~ 554 (585)
..+ ..+|..++|+|+|||+|||++|+++++ +.+++.|+...
T Consensus 87 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~p~~rg~Gig~~L~~~~~----~~~~~~g~~~~ 162 (215)
T 3te4_A 87 PEKAADSCEHPKFKKILSLMDHVEEQFNIFDVYPDEELILDGKILSVDTNYRGLGIAGRLTERAY----EYMRENGINVY 162 (215)
T ss_dssp CCCGGGGCCCHHHHHHHHHHHHHHHHCCHHHHCTTCSEEEEEEEEEECGGGTTSSHHHHHHHHHH----HHHHHHTCCEE
T ss_pred HHHHHhhccCccHHHHHHHHHHHhhccCHHHhCCCCCeEEEEEEEEECHHHhCCCHHHHHHHHHH----HHHHHcCCCEE
Confidence 112 788999999999999999999999999 88999888764
Q ss_pred Cccceeccc-ccccccCeeecCc
Q 007903 555 GFPFLRGRT-HSYYRLKFNCSSK 576 (585)
Q Consensus 555 g~~~~~~~a-~~YYrlGF~~~~~ 576 (585)
........+ ..|.++||++.+.
T Consensus 163 ~~~~~~~~~~~~y~~~Gf~~~~~ 185 (215)
T 3te4_A 163 HVLCSSHYSARVMEKLGFHEVFR 185 (215)
T ss_dssp EEEESSHHHHHHHHHTTCEEEEE
T ss_pred EEEecCHHHHHHHHHCCCEEEEE
Confidence 322222223 3455799998754
|
| >3fbu_A Acetyltransferase, GNAT family; structur genomics, PSI2, MCSG, protein structure initiative, midwest for structural genomics; HET: COA; 1.80A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.03 E-value=9.6e-10 Score=100.14 Aligned_cols=123 Identities=9% Similarity=0.030 Sum_probs=84.6
Q ss_pred cccccccccCHHHHHHHHHHHHHcccc--ccCCHHHHHhcc-------CeEEEEEE--CCeEEEEEEEeeeccCCceEEe
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGAL--VRRTDEELLKAL-------DSFYVVER--EGQIIACAALFPFFKEKCGEVA 517 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~--~~~~~e~l~~~i-------~~~~Va~~--dg~IVG~~~l~~~~~~~~aeI~ 517 (585)
..||+++++|++.+.+++.......+. .+.+.+.....+ ...+++.. ++++||++.+........+++.
T Consensus 8 ~~ir~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~iG~~~~~~~~~~~~~~i~ 87 (168)
T 3fbu_A 8 LLIRKFEFKDWEAVHEYTSDSDVMKYIPEGVFTEEDTRNFVNKNMGENAKNFPVILIGENILVGHIVFHKYFGEHTYEIG 87 (168)
T ss_dssp EEECCCCGGGHHHHHHHHTCTTTTTTSTTCSCCHHHHHHHHHHTTC--CCEEEEEETTTTEEEEEEEEEEEETTTEEEEE
T ss_pred eEEEeCCHHHHHHHHHHhCCHHHHHhCCCCCCCHHHHHHHHHHHHhcccceEEEEECCCCCEEEEEEEEeecCCCcEEEE
Confidence 579999999999999996542222121 234555544433 22555555 8999999999865435667774
Q ss_pred eEEEccCCcCCcHHHHHHHHHHhhhHHHHHHc-CCcccCcccee--ccc-ccccccCeeecCc
Q 007903 518 AIGVSPECRGQGQGDKLLGLCIWPLLSETRYD-HISTNGFPFLR--GRT-HSYYRLKFNCSSK 576 (585)
Q Consensus 518 ~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~-gi~~~g~~~~~--~~a-~~YYrlGF~~~~~ 576 (585)
++|+|+|||+|+|++|++.++ +++.+. ++......... ..+ +.|.++||+..+.
T Consensus 88 -~~v~~~~rg~Gig~~ll~~~~----~~a~~~~~~~~i~l~v~~~N~~a~~~y~k~GF~~~g~ 145 (168)
T 3fbu_A 88 -WVFNPKYFNKGYASEAAQATL----KYGFKEMKLHRIIATCQPENTPSYRVMEKIGMRREGY 145 (168)
T ss_dssp -EEECGGGTTSSHHHHHHHHHH----HHHHHTSCCSEEEEEECTTCHHHHHHHHHTTCEEEEE
T ss_pred -EEECHHHhcCCHHHHHHHHHH----HHHHhhCCceEEEEEeccCChHHHHHHHHCCCeEEEE
Confidence 679999999999999999999 888765 88765332221 223 3455899997753
|
| >2vi7_A Acetyltransferase PA1377; GNAT, GCN5 family, N-acetyltransferase, hypothetical protein; 2.25A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.02 E-value=4.8e-10 Score=104.42 Aligned_cols=123 Identities=16% Similarity=0.263 Sum_probs=84.7
Q ss_pred cccccccccCHHHHHHHHHHHHHcccc--ccC-CHHHHHhcc-------C-eEEEEEECCeEEEEEEEeeecc---CCce
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGAL--VRR-TDEELLKAL-------D-SFYVVEREGQIIACAALFPFFK---EKCG 514 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~--~~~-~~e~l~~~i-------~-~~~Va~~dg~IVG~~~l~~~~~---~~~a 514 (585)
..||+++++|++.+.++.......... .+. +.+.+...+ . .++++..+|++||++.+..... ...+
T Consensus 8 ~~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~ 87 (177)
T 2vi7_A 8 IRLERYSERHVEGLTALYNDPAVARQVLQMPYQSVEQRRKRLHDSADDDRLLILVALHQGDVIGSASLEQHPRIRRSHSG 87 (177)
T ss_dssp EEEEECCGGGHHHHHHHHTSHHHHTTSSCCSSCCHHHHHHHHTTC-CCTTEEEEEEEETTEEEEEEEEEECSSGGGTTEE
T ss_pred EEEEECCHHHHHHHHHHHhChhhhcccccCCCCCHHHHHHHHhhhcccCCcEEEEEEECCEEEEEEEEecCCccccceEE
Confidence 579999999999999997654322221 111 333333221 2 5678888999999999875321 2345
Q ss_pred EEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHc-CCcccCcccee--ccc-ccccccCeeecCc
Q 007903 515 EVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYD-HISTNGFPFLR--GRT-HSYYRLKFNCSSK 576 (585)
Q Consensus 515 eI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~-gi~~~g~~~~~--~~a-~~YYrlGF~~~~~ 576 (585)
++ .++|+|+|||+|||++|+++++ +++++. ++....+.... ..+ +.|.|+||+..+.
T Consensus 88 ~~-~~~v~p~~rg~Gig~~ll~~~~----~~a~~~~~~~~i~l~v~~~N~~a~~~Yek~GF~~~g~ 148 (177)
T 2vi7_A 88 SI-GMGVAVAWQGKGVGSRLLGELL----DIADNWMNLRRVELTVYTDNAPALALYRKFGFETEGE 148 (177)
T ss_dssp EC-TTCCEESSTTTTHHHHHHHHHH----HHHHHTSCCSEEEEEEETTCHHHHHHHHHTTCEEEEE
T ss_pred EE-EEEECHHHcCCCHHHHHHHHHH----HHHHhcCCeEEEEEEEECCCHHHHHHHHHCCCEEEee
Confidence 66 7999999999999999999999 888876 47765433222 233 3455899997753
|
| >3sxn_A Enhanced intracellular surviVal protein; GNAT fold, acetyltransferase, acetyl COA binding, transferas; HET: COA; 2.03A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.02 E-value=5e-10 Score=120.59 Aligned_cols=118 Identities=12% Similarity=0.090 Sum_probs=87.8
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHH---HHHhcc--CeEEEEEEC--CeEEEEEEEeeec----cC---Cce
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDE---ELLKAL--DSFYVVERE--GQIIACAALFPFF----KE---KCG 514 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e---~l~~~i--~~~~Va~~d--g~IVG~~~l~~~~----~~---~~a 514 (585)
++||+++++|++++.+|..... ..+++.+ .+...+ ..+++++++ |++||++.+.+.. .. +.+
T Consensus 25 m~IR~~~~~D~~~i~~L~~~~F----~~~~~~~~~~~~~~~~~~~~~~va~~~~~g~lvG~~~~~~~~~~~~g~~~~~~~ 100 (422)
T 3sxn_A 25 RTLHTITDDDWTRIALLARFAF----GDIEPEQTQAAWRSMVPEDATVVVPDETDDAFVGQSLYLDMQLTVPGGEVLPVA 100 (422)
T ss_dssp EEESSCCHHHHHHHHHHHHHHH----SCCCCHHHHHHHHTTCCTTCEEEEECTTSSSEEEEEEEEEEEEECTTSCEEEEE
T ss_pred cEEEECCHHHHHHHHHHHHHHc----CCCCChHHHHHHHhhcCCCcEEEEEECCCCcEEEEEEEEEeEeecCCCcccccc
Confidence 4799999999999999966543 2233333 232223 578899999 9999999987542 11 357
Q ss_pred EEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee-cccccccccCeeecCcc
Q 007903 515 EVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR-GRTHSYYRLKFNCSSKS 577 (585)
Q Consensus 515 eI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~-~~a~~YYrlGF~~~~~~ 577 (585)
+|..++|+|+|||+|||++||++++ +.+++.|+.... +. .....|.|+||+..+..
T Consensus 101 ~I~~v~V~P~~Rg~Gig~~Ll~~~l----~~~~~~g~~~~~---L~~~~~~fY~r~GF~~~~~~ 157 (422)
T 3sxn_A 101 GISFVAVAPTHRRRGVLRAMYTELH----DRIARAGYPLAV---LTASEGGIYGRFGYGVATIE 157 (422)
T ss_dssp EEEEEEECTTTTTSSHHHHHHHHHH----HHHHHHTCSEEE---ECCSSTTSSGGGTCEECCEE
T ss_pred eEEEEEECHHHcCCCHHHHHHHHHH----HHHHhCCCcEEE---EecCCHHHHHhCCCEEecee
Confidence 8999999999999999999999999 888888875432 22 23344558999998765
|
| >3qb8_A A654L protein; GNAT N-acetyltransferase, acetyltransferase, COA, spermine, spermidine, transferase; HET: COA; 1.50A {Paramecium bursaria chlorella virus 1} | Back alignment and structure |
|---|
Probab=99.02 E-value=1.1e-10 Score=109.42 Aligned_cols=124 Identities=12% Similarity=0.099 Sum_probs=79.8
Q ss_pred cccccccccCHHHHHHHHHHHHHccc-cccC-C------HHHHH----hcc--CeEEE-EEECCeEEEEEEEeee-----
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGA-LVRR-T------DEELL----KAL--DSFYV-VEREGQIIACAALFPF----- 508 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~-~~~~-~------~e~l~----~~i--~~~~V-a~~dg~IVG~~~l~~~----- 508 (585)
+.||+++++|++.+.+++........ ...| . .+... ..+ ...++ ++.+|++||++...+.
T Consensus 2 ~~ir~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~ivG~~~~~~~~~~~~ 81 (197)
T 3qb8_A 2 YTLIKLTSEYTSRAISFTSRNFVASEPTSIALKLTTCDFTTSFQNIMKQCVDYGHSFAFVDADDNIKAQILNIPYDAYEN 81 (197)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHHHCHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCEEEECTTCCEEEEEEEEEHHHHHT
T ss_pred cEEEECCHHHHHHHHHHHHHhccccCcHHHHhCCCcchHHHHHHHHHHHHHhcCceEEEEcCCCCEEEEEEecCCcccch
Confidence 47999999999999998643321111 0001 0 11111 111 34455 4778999999664431
Q ss_pred --c---cCC-----------c--eEEe---eEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceecccc-cc
Q 007903 509 --F---KEK-----------C--GEVA---AIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTH-SY 566 (585)
Q Consensus 509 --~---~~~-----------~--aeI~---~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~-~Y 566 (585)
. ... . .+|. .++|+|+|||+|||++|+++++ +++++.|+........+..+. .|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~l~V~p~~rg~Gig~~Ll~~~~----~~a~~~g~~~i~l~~~n~~a~~~y 157 (197)
T 3qb8_A 82 MHYGNIRETDPMFDLFGNLDSYTPDDKCLYVFAIGSEVTGKGLATKLLKKTI----EESSSHGFKYIYGDCTNIISQNMF 157 (197)
T ss_dssp CCCCCCGGGHHHHHHHHGGGGSCCSSCEEEEEEEEESSCSSSHHHHHHHHHH----HHHHHTTCCEEEEEECSHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCcCcceeeEeeeceEEEECHHHcCCCHHHHHHHHHH----HHHHHcCCCEEEEEcCCHHHHHHH
Confidence 0 011 1 6666 8999999999999999999999 889888887644332223333 45
Q ss_pred cccCeeecCc
Q 007903 567 YRLKFNCSSK 576 (585)
Q Consensus 567 YrlGF~~~~~ 576 (585)
.++||+..+.
T Consensus 158 ~k~GF~~~~~ 167 (197)
T 3qb8_A 158 EKHGFETVGS 167 (197)
T ss_dssp HHTTCEEEEE
T ss_pred HHCCCeEEEE
Confidence 5799998754
|
| >2kcw_A Uncharacterized acetyltransferase YJAB; GNAT fold, acyltransferase; NMR {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.02 E-value=1.8e-10 Score=102.79 Aligned_cols=116 Identities=18% Similarity=0.187 Sum_probs=77.3
Q ss_pred cccccccccCHHHHHHHHHHHHHccc--cccCCHHHHHhc----c--CeEEEEEEC-CeEEEEEEEeeeccCCceEEeeE
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGA--LVRRTDEELLKA----L--DSFYVVERE-GQIIACAALFPFFKEKCGEVAAI 519 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~--~~~~~~e~l~~~----i--~~~~Va~~d-g~IVG~~~l~~~~~~~~aeI~~L 519 (585)
..||+++++|++.+.+++........ ..+...+.+... . ..+++++.+ |++||++.+. .++|..+
T Consensus 3 ~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~vG~~~~~------~~~i~~~ 76 (147)
T 2kcw_A 3 ISIRRSRHEEGEELVAIWCRSVDATHDFLSAEYRTELEDLVRSFLPEAPLWVAVNERDQPVGFMLLS------GQHMDAL 76 (147)
T ss_dssp EEEEECCSTTHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHTTTTTSCCEEEEETTSCEEEEEEEE------TTEEEEE
T ss_pred EEEecCCHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHhhCCCCcEEEEEcCCCCEEEEEEEe------cceeccE
Confidence 57899999999999999765433221 111112222221 1 357788887 9999999887 2578899
Q ss_pred EEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceecccccccccCeeecCc
Q 007903 520 GVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYYRLKFNCSSK 576 (585)
Q Consensus 520 ~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YYrlGF~~~~~ 576 (585)
+|+|+|||+|+|++|+++++ ++++...+.. ........+.|.++||+..+.
T Consensus 77 ~v~p~~rg~Gig~~ll~~~~----~~~~~~~~~v--~~~N~~a~~~y~k~Gf~~~~~ 127 (147)
T 2kcw_A 77 FIDPDVRGCGVGRVLVEHAL----SMAPELTTNV--NEQNEQAVGFYKKVGFKVTGR 127 (147)
T ss_dssp EECHHHHTTTHHHHHHHHHH----HHCTTCEEEE--ETTCHHHHHHHHHHTEEEEEE
T ss_pred EECHHHhCCCHHHHHHHHHH----HhccceEEEE--ecCChHHHHHHHHCCCEEece
Confidence 99999999999999999999 6653321111 111112233455799998754
|
| >2i00_A Acetyltransferase, GNAT family; structural genomics, PSI-2, structure initiative, midwest center for structural genomic transferase; 2.30A {Enterococcus faecalis} SCOP: d.106.1.4 d.108.1.10 | Back alignment and structure |
|---|
Probab=99.02 E-value=6.2e-10 Score=118.49 Aligned_cols=122 Identities=17% Similarity=0.210 Sum_probs=86.6
Q ss_pred cccccccccCHHHHHHHHHHHHHcccc-----ccCCHHHHHhcc------CeEEEEEECCeEEEEEEEeeecc------C
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGAL-----VRRTDEELLKAL------DSFYVVEREGQIIACAALFPFFK------E 511 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~-----~~~~~e~l~~~i------~~~~Va~~dg~IVG~~~l~~~~~------~ 511 (585)
++||+++++|++++.+|+......... ..|+.+.....+ ..+++++++|++||++.+.++.. .
T Consensus 10 ~~iR~~~~~D~~~i~~l~~~~f~~~~~~l~~~~~w~~~~~~~~~~~~~~~~~~~va~~~g~lVG~~~~~~~~~~~~g~~~ 89 (406)
T 2i00_A 10 LTLKPVEEEHIDQFNELLSYVFQVTEADIEESGFENKRAFIKSKQPILELSKVFGWFHENQLISQIAIYPCEVNIHGALY 89 (406)
T ss_dssp CEEEECCGGGHHHHHHHHHHHCCCCHHHHHHTTCSSHHHHHHTTHHHHHHSEEEEEEETTEEEEEEEEEEEEEEETTEEE
T ss_pred ceEEECCHHHHHHHHHHHHHHcCCCCcccccccccccHHHHHHhhhccccccEEEEEECCEEEEEEEEEEEEEEECCEEE
Confidence 579999999999999996543211100 123333322222 57889999999999999875321 1
Q ss_pred CceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceecccc-cccccCeeecCcc
Q 007903 512 KCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTH-SYYRLKFNCSSKS 577 (585)
Q Consensus 512 ~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~-~YYrlGF~~~~~~ 577 (585)
+.++|..++|+|+|||+|||++||++++ +.+++.|+.... +..... .|.++||+..+..
T Consensus 90 ~~~~i~~v~V~P~~Rg~Gig~~Ll~~~l----~~~~~~g~~~~~---L~~~~~~fY~r~GF~~~~~~ 149 (406)
T 2i00_A 90 KMGGVTGVGTYPEYANHGLMKDLIQTAL----EEMRQDKQWISY---LFPYNIPYYRRKGWEIMSDK 149 (406)
T ss_dssp EEEEEEEEEECGGGTTSCHHHHHHHHHH----HHHHHTTCCEEE---ECCSCHHHHHHTTCEEEEEE
T ss_pred EeccEEEEEEChhhCCCCHHHHHHHHHH----HHHHhCCCeEEE---EEccChhhhhccCceEccce
Confidence 3678999999999999999999999999 889888876432 222234 4557999987653
|
| >3eg7_A Spermidine N1-acetyltransferase; structural genomics, IDP016 transferase, center for structural genomics of infectious D csgid; HET: MSE; 2.38A {Vibrio cholerae} SCOP: d.108.1.0 | Back alignment and structure |
|---|
Probab=99.01 E-value=5.1e-10 Score=102.62 Aligned_cols=123 Identities=17% Similarity=0.140 Sum_probs=84.2
Q ss_pred cccccccccCHHHHHHHHHHHHHccc--cccC-CHHHHH----hcc----CeEEEEE-ECCeEEEEEEEeeecc-CCceE
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGA--LVRR-TDEELL----KAL----DSFYVVE-REGQIIACAALFPFFK-EKCGE 515 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~--~~~~-~~e~l~----~~i----~~~~Va~-~dg~IVG~~~l~~~~~-~~~ae 515 (585)
..||+++++|++.+.+++.......+ ..++ +.+... ..+ ..++++. .+|++||++.+..... ...++
T Consensus 8 i~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~ 87 (176)
T 3eg7_A 8 LTLRALERGDLRFIHNLNNNRNIMSYWFEEPYESFDELEELYNKHIHDNAERRFVVEDAQKNLIGLVELIEINYIHRSAE 87 (176)
T ss_dssp CEEEECCGGGHHHHHHHHTTTCSCEEETTEEECSHHHHHHHHHHSTTCTTCEEEEEECTTCCEEEEEEEEEEETTTTEEE
T ss_pred EEEeeCCHHHHHHHHHHHcCHHHHhhhccccccCHHHHHHHHHHHhcCCCccEEEEEecCCCEEEEEEEEecCcccCceE
Confidence 57999999999999999643221111 1121 333322 222 4577777 8899999999875432 45667
Q ss_pred EeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHc-CCcccCcccee--cccc-cccccCeeecCc
Q 007903 516 VAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYD-HISTNGFPFLR--GRTH-SYYRLKFNCSSK 576 (585)
Q Consensus 516 I~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~-gi~~~g~~~~~--~~a~-~YYrlGF~~~~~ 576 (585)
+. ++|+|+|||+|+|++|++.++ +++++. ++......... ..+. .|.++||+..+.
T Consensus 88 ~~-~~v~~~~rg~Gig~~ll~~~~----~~a~~~~g~~~i~~~~~~~N~~a~~~y~k~GF~~~~~ 147 (176)
T 3eg7_A 88 FQ-IIIAPEHQGKGFARTLINRAL----DYSFTILNLHKIYLHVAVENPKAVHLYEECGFVEEGH 147 (176)
T ss_dssp EE-EEECGGGTTSSCHHHHHHHHH----HHHHHTSCCSEEEEEEETTCHHHHHHHHHTTCEEEEE
T ss_pred EE-EEECHHHhCCCHHHHHHHHHH----HHHHHhCCccEEEEEehhcCHHHHHHHHHCCCEEeee
Confidence 74 999999999999999999999 888774 88765332221 2233 455799998754
|
| >2qec_A Histone acetyltransferase HPA2 and related acetyltransferases; NP_600742.1, acetyltransferase (GNAT) family; 1.90A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=99.01 E-value=5.3e-10 Score=104.25 Aligned_cols=121 Identities=18% Similarity=0.133 Sum_probs=80.6
Q ss_pred cccccccccCHHHHHHHHHHHHHcc-----ccccCC-----HHH-HHh-------ccCeEEEEEE-CCeEEEEEEEeeec
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESG-----ALVRRT-----DEE-LLK-------ALDSFYVVER-EGQIIACAALFPFF 509 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~-----~~~~~~-----~e~-l~~-------~i~~~~Va~~-dg~IVG~~~l~~~~ 509 (585)
..||+++++|++.+.+++....... ...+.. ... +.. ....++|++. +|++||++.+.+..
T Consensus 4 ~~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~~~ 83 (204)
T 2qec_A 4 PTVLPATQADFPKIVDVLVEAFANDPTFLRWIPQPDPGSAKLRALFELQIEKQYAVAGNIDVARDSEGEIVGVALWDRPD 83 (204)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHTTCHHHHTTSCSCCGGGHHHHHHHHHHHHHTHHHHEEEEEEECTTSCEEEEEEEECCC
T ss_pred cEEecCCHHHHHHHHHHHHHHhhcChhhEEEeCCCchhHHHHHHHHHHHHhhhcccCceEEEEECCCCCEEEEEEEeCCC
Confidence 5799999999999999976543221 111111 111 111 1146788888 99999999986421
Q ss_pred --------------------------------------cCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCC
Q 007903 510 --------------------------------------KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHI 551 (585)
Q Consensus 510 --------------------------------------~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi 551 (585)
..+..+|..++|+|+|||+|||++|+++++ +++++.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~l~V~p~~rg~Gig~~Ll~~~~----~~a~~~-- 157 (204)
T 2qec_A 84 GNHSAKDQAAMLPRLVSIFGIKAAQVAWTDLSSARFHPKFPHWYLYTVATSSSARGTGVGSALLNHGI----ARAGDE-- 157 (204)
T ss_dssp ------------CCHHHHHC-CCC---------CTTSCSSCCEEEEEEEECGGGTTSSHHHHHHHHHH----HHHTTS--
T ss_pred CCcchhHHHhhhhHHHHHhCccHHHHHHHHHHHHhhCCCCCeEEEEEEEEChhhcCCCHHHHHHHHHH----HHhhhC--
Confidence 234578999999999999999999999999 777665
Q ss_pred cccCccceeccc-ccccccCeeecCc
Q 007903 552 STNGFPFLRGRT-HSYYRLKFNCSSK 576 (585)
Q Consensus 552 ~~~g~~~~~~~a-~~YYrlGF~~~~~ 576 (585)
.......+..+ +.|.++||+..+.
T Consensus 158 -~~~v~~~n~~a~~~y~k~GF~~~~~ 182 (204)
T 2qec_A 158 -AIYLEATSTRAAQLYNRLGFVPLGY 182 (204)
T ss_dssp -CEEEEESSHHHHHHHHHTTCEEEEE
T ss_pred -CeEEEecCccchHHHHhcCCeEeEE
Confidence 11111111233 3455799998754
|
| >3igr_A Ribosomal-protein-S5-alanine N-acetyltransferase; fisch MCSG, structural genomics, midwest center for structural GE protein structure initiative; HET: MSE; 2.00A {Vibrio fischeri} SCOP: d.108.1.0 | Back alignment and structure |
|---|
Probab=99.00 E-value=1.6e-09 Score=99.95 Aligned_cols=123 Identities=16% Similarity=0.142 Sum_probs=82.5
Q ss_pred cccccccccCHHHHHHHHHHHHH--ccccc-----cCCHHHHHhcc-----------CeEEEEEE--CCeEEEEEEEeee
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVE--SGALV-----RRTDEELLKAL-----------DSFYVVER--EGQIIACAALFPF 508 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~--~~~~~-----~~~~e~l~~~i-----------~~~~Va~~--dg~IVG~~~l~~~ 508 (585)
..||+++++|++.+.+++..... ..+.. ..+.+.+...+ ...+++.. +|++||++.+...
T Consensus 10 ~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~vG~~~~~~~ 89 (184)
T 3igr_A 10 YQVRLIKSSDAVTIANYFMRNRHHLAPWEPKRSHAFFTPEGWKQRLLQLVELHKHNLAFYFVVVDKNEHKIIGTVSYSNI 89 (184)
T ss_dssp EEEEECCGGGHHHHHHHHHHTHHHHTTTSCCCCGGGGSHHHHHHHHHHHHHHHHTTSCEEEEEEETTTTEEEEEEEEEEE
T ss_pred EEEEecCHHHHHHHHHHHhccHhhcCcCCCCchhhccCHHHHHHHHHHHHhhcccCceEEEEEEECCCCeEEEEEEeeec
Confidence 57999999999999999765321 12211 11334333322 23444433 7899999999754
Q ss_pred cc--CCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHH-HHcCCcccCcccee--c-ccccccccCeeecCc
Q 007903 509 FK--EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSET-RYDHISTNGFPFLR--G-RTHSYYRLKFNCSSK 576 (585)
Q Consensus 509 ~~--~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A-~~~gi~~~g~~~~~--~-~a~~YYrlGF~~~~~ 576 (585)
.. ...+++. ++|+|+|||+|||++|++.++ +++ ++.++......... . ..+.|.++||+..+.
T Consensus 90 ~~~~~~~~~i~-~~v~~~~rg~Gig~~ll~~~~----~~a~~~~g~~~i~~~v~~~N~~a~~~y~k~GF~~~g~ 158 (184)
T 3igr_A 90 TRFPFHAGHVG-YSLDSEYQGKGIMRRAVNVTI----DWMFKAQNLHRIMAAYIPRNEKSAKVLAALGFVKEGE 158 (184)
T ss_dssp ECTTTCEEEEE-EEECGGGTTSSHHHHHHHHHH----HHHHHTSCCSEEEEEECTTCHHHHHHHHHTTCEEEEE
T ss_pred ccccCceEEEE-EEEChhhccCcHHHHHHHHHH----HHHHhhCCceEEEEEecCCCHHHHHHHHHcCCEeeee
Confidence 32 3456775 799999999999999999999 888 66788764332221 2 333455899998754
|
| >3tth_A Spermidine N1-acetyltransferase; central intermediary metabolism; 3.30A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=99.00 E-value=8.2e-10 Score=100.82 Aligned_cols=123 Identities=15% Similarity=0.091 Sum_probs=83.4
Q ss_pred cccccccccCHHHHHHHHHHHHHcccc--cc-CCHHHHHhcc--------CeEEEEE-ECCeEEEEEEEeeecc-CCceE
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGAL--VR-RTDEELLKAL--------DSFYVVE-REGQIIACAALFPFFK-EKCGE 515 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~--~~-~~~e~l~~~i--------~~~~Va~-~dg~IVG~~~l~~~~~-~~~ae 515 (585)
..||+++++|++.+.++........+. .+ .+.+.....+ ..+|++. .+|++||++.+..... ...++
T Consensus 7 i~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~ 86 (170)
T 3tth_A 7 IRLSALEREDLKFVHELNNNLSIMSYWFEEPYESYRELEDLHIKHIHDQSERRFIIKDLKDNKVGLVELTEIDFIHRRCE 86 (170)
T ss_dssp CEEEECCGGGHHHHHHHHTC--CCEEETTEEECSHHHHHHHHHHHTTCCSCEEEEEECTTCCEEEEEEEEEEETTTTEEE
T ss_pred EEEeeCCHHHHHHHHHHHcCHHHHHhhccCCcccHHHHHHHHHhhccCCCccEEEEEcCCCCEEEEEEEEecccccceEE
Confidence 579999999999999986543222111 11 1333333222 4567777 7899999998875332 35667
Q ss_pred EeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHc-CCcccCcccee--c-ccccccccCeeecCc
Q 007903 516 VAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYD-HISTNGFPFLR--G-RTHSYYRLKFNCSSK 576 (585)
Q Consensus 516 I~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~-gi~~~g~~~~~--~-~a~~YYrlGF~~~~~ 576 (585)
+ .++|+|+|||+|+|++|++.++ +++.+. ++......... . ..+.|.++||+..+.
T Consensus 87 i-~~~v~~~~rg~Gig~~ll~~~~----~~a~~~~~~~~i~~~~~~~N~~a~~~y~k~GF~~~g~ 146 (170)
T 3tth_A 87 F-AIIISPGEEGKGYATEATDLTV----EYAFSILNLHKIYLLVDEDNPAALHIYRKSGFAEEGK 146 (170)
T ss_dssp E-EEEECTTSCSSCSHHHHHHHHH----HHHHHTSCCCEEEEEEETTCHHHHHHHHTTTCEEEEE
T ss_pred E-EEEECccccCCCHHHHHHHHHH----HHHHhhCCceEEEEEecCCCHHHHHHHHHCCCeEEEE
Confidence 6 5899999999999999999999 888664 88765432222 2 333455899998753
|
| >3f5b_A Aminoglycoside N(6')acetyltransferase; APC60744, legionella pneumophila subsp. pneumophila, structural genomics, PSI-2; HET: MSE; 2.00A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.00 E-value=4.9e-10 Score=103.31 Aligned_cols=124 Identities=10% Similarity=-0.037 Sum_probs=84.5
Q ss_pred ccccccccccCHHHHHHHHHHHHHcccc-c---cCCHHHHHhcc------CeEEEEEECCeEEEEEEEeeec-----cCC
Q 007903 448 YEGTRTAKVTDLSGIKQIIQPLVESGAL-V---RRTDEELLKAL------DSFYVVEREGQIIACAALFPFF-----KEK 512 (585)
Q Consensus 448 ~~~IR~at~~D~~~I~~Li~~~~~~~~~-~---~~~~e~l~~~i------~~~~Va~~dg~IVG~~~l~~~~-----~~~ 512 (585)
...||+++++|++.+.+++.......+. . +.+.+.+...+ ..+++++.+|++||++.+.... ...
T Consensus 14 ~~~ir~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~ 93 (182)
T 3f5b_A 14 RFCFKQMNKSQHELVLGWIHQPHINEWLHGDGLSNTIKDLHEFLNDGKPWATHWIAYDNEIPFAYLITSEIEKSEEYPDG 93 (182)
T ss_dssp CEEEEECCGGGHHHHHHHTTSHHHHTTSCHHHHHHHHHHHHHHHTTSCCSSEEEEEEETTEEEEEEEEEEECSCSSCTTC
T ss_pred eEEEEECCHHHHHHHHHHHcCchhhhhccCCCccccHHHHHHHHhcCCCCeEEEEEEeCCCcEEEEEEeccccccccCCC
Confidence 3679999999999998874432222221 1 11233333322 4688889999999999987532 235
Q ss_pred ceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee--cccc-cccccCeeecCc
Q 007903 513 CGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR--GRTH-SYYRLKFNCSSK 576 (585)
Q Consensus 513 ~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~--~~a~-~YYrlGF~~~~~ 576 (585)
..+|..++|+|+|||+|||++|+++++ +++. .++......... ..+. .|.++||+..+.
T Consensus 94 ~~~i~~~~v~p~~rg~Gig~~ll~~~~----~~~~-~~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~ 155 (182)
T 3f5b_A 94 AVTLDLFICRLDYIGKGLSVQMIHEFI----LSQF-SDTKIVLINPEISNERAVHVYKKAGFEIIGE 155 (182)
T ss_dssp EEEEEEEECSGGGCCHHHHHHHHHHHH----HHHC-TTCSEEEECCBTTCHHHHHHHHHHTCEEEEE
T ss_pred ceEEEEEEEChhhcCCchHHHHHHHHH----HHhh-CCCCEEEEecCcCCHHHHHHHHHCCCEEEeE
Confidence 689999999999999999999999999 7773 366654322211 1233 455799998754
|
| >3juw_A Probable GNAT-family acetyltransferase; structural genomics, APC60242, acetyltransferas protein structure initiative; HET: MSE; 2.11A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.99 E-value=8.7e-10 Score=101.13 Aligned_cols=122 Identities=13% Similarity=0.072 Sum_probs=80.9
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHHhcc-----------CeEEEEE--ECCeEEEEEEEeeecc-----
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL-----------DSFYVVE--REGQIIACAALFPFFK----- 510 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i-----------~~~~Va~--~dg~IVG~~~l~~~~~----- 510 (585)
..||+++++|++.+.++ ..........+++.+.....+ ..+|++. .+|++||++.+.....
T Consensus 16 l~ir~~~~~D~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vG~~~~~~~~~~~~~~ 94 (175)
T 3juw_A 16 LVLEPQSMARFDQWFAM-ERQRDEAGHRDLTEDQAWLRLCARQGMWDAYACGFYYLLDPVSGEMRGEAGFQFRRRGFGPG 94 (175)
T ss_dssp CEEEECCGGGHHHHHHH-HHHSCSTTTTTCCHHHHHHHHHHHHHHHHHHSCCEEEEECTTTCCEEEEEEEECCCCSSCTT
T ss_pred eEecCCCHHHHHHHHHH-HHHHHhcCCCCCCHHHHHHHHHHHHHHHHhcCccEEEEEECCCCcEEEEeeeEEeeccccCC
Confidence 57999999999999999 221111111344554433322 2244444 3799999999985221
Q ss_pred -CCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHc-CCcccCcccee--ccc-ccccccCeeecCc
Q 007903 511 -EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYD-HISTNGFPFLR--GRT-HSYYRLKFNCSSK 576 (585)
Q Consensus 511 -~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~-gi~~~g~~~~~--~~a-~~YYrlGF~~~~~ 576 (585)
....++ .++|+|+|||+|||++|++.++ +++++. ++......... ..+ +.|.++||+..+.
T Consensus 95 ~~~~~~~-~~~v~p~~rg~Gig~~ll~~~~----~~a~~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~~~ 160 (175)
T 3juw_A 95 FDNHPEA-AWAVASAHQGRGLAAEAMQALL----AHHDRSSGRQRVVALIARSNLPSLRLAERLGFRGYSD 160 (175)
T ss_dssp TTTSCEE-EEEECGGGTTSSHHHHHHHHHH----HHHHHHHTSCCEEEEEETTCHHHHHHHHHTTCEEEEE
T ss_pred CCCCceE-EEEECHHHhCCCHHHHHHHHHH----HHHHhCCCCceEEEEECCCChhHHHHHHHcCCeEecc
Confidence 145566 4899999999999999999999 877775 77664332222 133 3455899998755
|
| >1ygh_A ADA4, protein (transcriptional activator GCN5); transcriptional regulation, histone acetylation; 1.90A {Saccharomyces cerevisiae} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=98.99 E-value=1.5e-09 Score=100.40 Aligned_cols=121 Identities=14% Similarity=0.184 Sum_probs=80.4
Q ss_pred ccccccccCHHHHHHHHHHH---HHccccccCCHHHHHhcc----C-eEEEEEECCeEEEEEEEeeeccCCceEEeeEEE
Q 007903 450 GTRTAKVTDLSGIKQIIQPL---VESGALVRRTDEELLKAL----D-SFYVVEREGQIIACAALFPFFKEKCGEVAAIGV 521 (585)
Q Consensus 450 ~IR~at~~D~~~I~~Li~~~---~~~~~~~~~~~e~l~~~i----~-~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V 521 (585)
+||.++.+|.++....+..+ ....+ ...+.+.+...+ . .++++..+|++||++.+.+.......++..++|
T Consensus 3 ~~r~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~i~~l~V 81 (164)
T 1ygh_A 3 EFRVVNNDNTKENMMVLTGLKNIFQKQL-PKMPKEYIARLVYDRSHLSMAVIRKPLTVVGGITYRPFDKREFAEIVFCAI 81 (164)
T ss_dssp EEEEECCSSCHHHHHHHHHHHHHHHHHC-TTSCHHHHHHHHHCTTCEEEEEEETTTEEEEEEEEEEEGGGTEEEEEEEEE
T ss_pred eEEEecCCCchhhHHHHHHHHHHHHhhc-ccCCHHHHHHHhhCCCceEEEEECCCCEEEEEEEEEEcCCCCceEEEEEEE
Confidence 57777777766555543222 22222 122344443322 2 346777899999999988654456788999999
Q ss_pred ccCCcCCcHHHHHHHHHHhhhHHHHHH-cCCcccCccceeccccccc-ccCeeecCc
Q 007903 522 SPECRGQGQGDKLLGLCIWPLLSETRY-DHISTNGFPFLRGRTHSYY-RLKFNCSSK 576 (585)
Q Consensus 522 ~PeyRGkGIGk~LL~~~~~~a~~~A~~-~gi~~~g~~~~~~~a~~YY-rlGF~~~~~ 576 (585)
+|+|||+|+|++|+++++ +++++ .|+.... ....+.+..|| ++||+..+.
T Consensus 82 ~p~~rg~Gig~~ll~~~~----~~a~~~~g~~~l~-v~~~n~a~~~y~k~GF~~~~~ 133 (164)
T 1ygh_A 82 SSTEQVRGYGAHLMNHLK----DYVRNTSNIKYFL-TYADNYAIGYFKKQGFTKEIT 133 (164)
T ss_dssp CTTCCCTTHHHHHHHHHH----HHHHHHSCCCEEE-EEECGGGHHHHHHTTCBSSCC
T ss_pred CHHHcCCCHHHHHHHHHH----HHHHhcCCceEEE-EecCChHHHHHHHcCCEecce
Confidence 999999999999999999 88888 8887322 11112444455 799987643
|
| >3frm_A Uncharacterized conserved protein; APC61048, staphylococcus epidermidis ATCC structural genomics, PSI-2, protein structure initiative; HET: MES; 2.32A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=98.99 E-value=5e-10 Score=111.99 Aligned_cols=123 Identities=11% Similarity=0.109 Sum_probs=86.1
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCC---HHHHHhcc----CeEEEEEECCeEEEEEEEeeeccCCceEEeeEEE
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRT---DEELLKAL----DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGV 521 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~---~e~l~~~i----~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V 521 (585)
.+||+++.+|++.+.++...... ....++. .+.+...+ ..++++..+|++||++.+.. .+..++|..++|
T Consensus 119 i~Ir~~~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~va~~~g~~vG~~~~~~--~~~~~~i~~l~V 195 (254)
T 3frm_A 119 VDIQLVSSNNINDYLHVYDAFAR-PFGDSYANMVKQHIYSSYNLDDIERLVAYVNHQPVGIVDIIM--TDKTIEIDGFGV 195 (254)
T ss_dssp CEEEECCTTTHHHHHHHHTTSCC-TTCHHHHHHHHHHHHHHTTTSSCEEEEEEETTEEEEEEEEEE--CSSCEEEEEEEE
T ss_pred eEEEECCccCHHHHHHHHHHhhc-cccchhHHHHHHHHHHHHhCCCcEEEEEEECCEEEEEEEEEE--cCCEEEEEEEEE
Confidence 67999999999999998432110 1111111 12222222 47889999999999999884 356899999999
Q ss_pred ccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceeccccccc-ccCeeecCccccc
Q 007903 522 SPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYY-RLKFNCSSKSFHI 580 (585)
Q Consensus 522 ~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YY-rlGF~~~~~~~~~ 580 (585)
+|+|||+|||++|+++++ ++|+..++... . .-...+..|| ++||+..+..+.+
T Consensus 196 ~p~~Rg~GiG~~Ll~~~~----~~a~~~~i~lv-~-~~n~~a~~~Y~k~GF~~~g~~~~~ 249 (254)
T 3frm_A 196 LEEFQHQGIGSEIQAYVG----RMANERPVILV-A-DGKDTAKDMYLRQGYVYQGFKYHI 249 (254)
T ss_dssp CGGGTTSSHHHHHHHHHH----HHHTTCCEEEE-E-CSSCTTHHHHHHTTCEEEEEEEEE
T ss_pred CHHHcCCCHHHHHHHHHH----HHhccCcEEEE-E-CCchHHHHHHHHCCCEEeeeEEEE
Confidence 999999999999999999 77755554431 1 1123444455 7999998877654
|
| >2hv2_A Hypothetical protein; PSI, protein structure initiative, midwest center for struct genomics, MCSG, structural genomics, unknown function; HET: EPE PG4; 2.40A {Enterococcus faecalis} SCOP: d.106.1.4 d.108.1.10 | Back alignment and structure |
|---|
Probab=98.98 E-value=1e-09 Score=116.49 Aligned_cols=122 Identities=11% Similarity=0.132 Sum_probs=86.2
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHHhcc--CeEEEEEECCeEEEEEEEeeecc------CCceEEeeEE
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--DSFYVVEREGQIIACAALFPFFK------EKCGEVAAIG 520 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i--~~~~Va~~dg~IVG~~~l~~~~~------~~~aeI~~L~ 520 (585)
++||+++++|++++.++.......... +...+.+...+ ..+++++++|++||++.+.++.. .+.++|..++
T Consensus 7 ~~iR~~~~~D~~~i~~l~~~~f~~~~~-~~~~~~~~~~~~~~~~~va~~~g~~vg~~~~~~~~~~~~g~~~~~~~i~~v~ 85 (400)
T 2hv2_A 7 KRVKKMGKEEMKEMFDLVIYAFNQEPT-AERQERFEKLLSHTQSYGFLIDEQLTSQVMATPFQVNFHGVRYPMAGIGYVA 85 (400)
T ss_dssp EEEEECCGGGHHHHHHHHHHHTTCCCC-HHHHHHHHHHHHTSEEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEECCHHHHHHHHHHHHHHcCCCCc-HHHHHHHHhhcccCcEEEEEECCEEEEEEEEeeeEEEECCEEEEeccEeEEE
Confidence 579999999999999995543222110 00011222222 67889999999999999875321 1358899999
Q ss_pred EccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceecc-cccccccCeeecCccc
Q 007903 521 VSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGR-THSYYRLKFNCSSKSF 578 (585)
Q Consensus 521 V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~-a~~YYrlGF~~~~~~~ 578 (585)
|+|+|||||+|++||++++ +.+++.|+....+ ... ...|.++||...+...
T Consensus 86 V~p~~Rg~Gig~~Ll~~~~----~~~~~~g~~~~~L---~~~~~~~Y~~~GF~~~~~~~ 137 (400)
T 2hv2_A 86 SYPEYRGEGGISAIMKEML----ADLAKQKVALSYL---APFSYPFYRQYGYEQTFEQA 137 (400)
T ss_dssp ECTTCCSSCHHHHHHHHHH----HHHHHTTCCEEEE---CCSCHHHHHTTTCEECCEEE
T ss_pred EChhhcCCCHHHHHHHHHH----HHHHHcCceEEEE---ecCCHhHHHhcCCEEeceEE
Confidence 9999999999999999999 8888888764332 222 3345579999876543
|
| >2wpx_A ORF14; transferase, acetyl transferase, antibiotic biosynthesis; HET: ACO; 2.31A {Streptomyces clavuligerus} PDB: 2wpw_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=2.8e-09 Score=109.05 Aligned_cols=126 Identities=15% Similarity=0.081 Sum_probs=88.1
Q ss_pred cccccccccCHHHHHHHH---HHHHHcccc-ccCCHHHHHhcc--------CeEEEEEECCeEEEEEEEeeeccCCceEE
Q 007903 449 EGTRTAKVTDLSGIKQII---QPLVESGAL-VRRTDEELLKAL--------DSFYVVEREGQIIACAALFPFFKEKCGEV 516 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li---~~~~~~~~~-~~~~~e~l~~~i--------~~~~Va~~dg~IVG~~~l~~~~~~~~aeI 516 (585)
+.||+++++|.+.+.+++ ......... .+.+.+.+...+ ..+++++.+|++||++.+........++|
T Consensus 8 ~~iR~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~g~~vG~~~~~~~~~~~~~~i 87 (339)
T 2wpx_A 8 LEFVPLAANDDETVGQWLDLMALAAETGPRAAPPCNVDMVGSLRFAPPATALDDWVVRSGGRVVGALRLALPDGAPTARV 87 (339)
T ss_dssp CEEEECCTTCHHHHHHHHHHHHHHHHSSSSCCCCCHHHHHHHHHCCCTTEEEEEEEEEETTEEEEEEEEEEETTCSEEEE
T ss_pred eEEEECCccCHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHhhccCCCcceeEEEEEECCEEEEEEEEEecCCCCeEEE
Confidence 579999999966665554 332222211 111455444333 35788889999999999985434567899
Q ss_pred eeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceec---------ccc-cccccCeeecCccc
Q 007903 517 AAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRG---------RTH-SYYRLKFNCSSKSF 578 (585)
Q Consensus 517 ~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~---------~a~-~YYrlGF~~~~~~~ 578 (585)
..++|+|+|||+|||++|+++++ +++++.|+.......... ... .|.++||...+...
T Consensus 88 ~~~~v~p~~r~~Gig~~Ll~~~~----~~~~~~g~~~i~~~~~~~n~~g~~~~~~~~~~~~~~Gf~~~~~~~ 155 (339)
T 2wpx_A 88 DQLLVHPGRRRRGIGRALWAHAR----ELARKHDRTTLTATVVESLPSGPAQDPGPAAFAAAMGAHRSDIPA 155 (339)
T ss_dssp EEEEECTTSCSSSHHHHHHHHHH----HHHHHTTCSEEEEEEEECCSSSCCCCCHHHHHHHHTTCEECSSCC
T ss_pred EEEEECHHHcCCCHHHHHHHHHH----HHHHHCCCcEEEEEeecCCCCcccccchHHHHHHHCCCeeeeeee
Confidence 99999999999999999999999 888888887654333221 233 35579999876543
|
| >2gan_A 182AA long hypothetical protein; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.10A {Pyrococcus horikoshii} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=98.97 E-value=2e-09 Score=101.24 Aligned_cols=124 Identities=19% Similarity=0.215 Sum_probs=85.3
Q ss_pred ccccc---ccccCHHHHHHHHHHHHHccc--------cccCCHHHH------------HhccCeEEEEEECCeEEEEEEE
Q 007903 449 EGTRT---AKVTDLSGIKQIIQPLVESGA--------LVRRTDEEL------------LKALDSFYVVEREGQIIACAAL 505 (585)
Q Consensus 449 ~~IR~---at~~D~~~I~~Li~~~~~~~~--------~~~~~~e~l------------~~~i~~~~Va~~dg~IVG~~~l 505 (585)
..||+ ++++|++.+.+++........ ......+.+ ......+++++.+|++||++.+
T Consensus 5 ~~ir~~~~~~~~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~ 84 (190)
T 2gan_A 5 KKIKNPSTVKDELLELMFRIYRSTNGKYPALEWVKRKPNPNDFNGFREVYEPFLKFRLSQEFDELYTYQKDNRIIGTIAL 84 (190)
T ss_dssp EECSSGGGGHHHHHHHHHHHHHHTTTCSSCCTTCSSCCCTTCHHHHHHHHHHHHHHHHHTTCSEEEEEEESSCEEEEEEE
T ss_pred eeecCccccchhHhhhHheehhhhcccChHHHHhhccCCHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEECCEEEEEEEE
Confidence 46888 899999999888654322211 011112221 1122578888999999999999
Q ss_pred ee-ec-------------cCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceecccc-c-cccc
Q 007903 506 FP-FF-------------KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTH-S-YYRL 569 (585)
Q Consensus 506 ~~-~~-------------~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~-~-YYrl 569 (585)
.. .. ....++|..++|+|+|||+|+|++|++.++ +++++.|+........+..+. . |.++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~----~~~~~~g~~~i~l~~~n~~a~~~~y~k~ 160 (190)
T 2gan_A 85 VYKRIKEKGIWWVPEELMNEKVGLIEFFVVDPEFQGKGIGSTLLEFAV----KRLRSLGKDPYVVTFPNLEAYSYYYMKK 160 (190)
T ss_dssp ECSCGGGTCCTTCCGGGCSTTEEEEEEEEECTTSTTSSHHHHHHHHHH----HHHHHTTCEEEEEECGGGSHHHHHHHTT
T ss_pred EecccccccccccccccCCCceEEEEEEEECHHHcCCCHHHHHHHHHH----HHHHHCCCCEEEEecCCccccccEEecC
Confidence 85 22 123789999999999999999999999999 888888887644321122333 4 4589
Q ss_pred CeeecCc
Q 007903 570 KFNCSSK 576 (585)
Q Consensus 570 GF~~~~~ 576 (585)
||+..+.
T Consensus 161 GF~~~~~ 167 (190)
T 2gan_A 161 GFREIMR 167 (190)
T ss_dssp TEEEEEC
T ss_pred CCEEeec
Confidence 9998753
|
| >3eo4_A Uncharacterized protein MJ1062; APC60792.2,MJ_1062,methanocaldococcus jannaschii DSM 2661, S genomics, PSI-2; HET: MES PG6; 2.19A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=98.97 E-value=1e-09 Score=100.02 Aligned_cols=122 Identities=11% Similarity=0.030 Sum_probs=83.1
Q ss_pred cccccccccCHHHHHHHHHHHHHccc--cccCC--HHHHHhcc-----C-eEEEEE---ECCeEEEEEEEeeeccCCceE
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGA--LVRRT--DEELLKAL-----D-SFYVVE---REGQIIACAALFPFFKEKCGE 515 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~--~~~~~--~e~l~~~i-----~-~~~Va~---~dg~IVG~~~l~~~~~~~~ae 515 (585)
..||+++++|++.+.+++.......+ ..+.+ .+.+...+ . .++++. .+|++||++.+.+..... ++
T Consensus 14 i~ir~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~~~~~~~~~~-~~ 92 (164)
T 3eo4_A 14 IIIRQITDNDLELLMAWRSNPLIYKFFYIQKEPLKWEEHYSWWMSRENRVDWIILLRENNTIRKVGSVNVSQLNTDN-PE 92 (164)
T ss_dssp EEEEECCGGGHHHHHHHHTCHHHHTTSTTCCSCCCHHHHHHHHHHCCSCEEEEEEEEETTEEEEEEEEEEECTTSSS-CE
T ss_pred EEEEECCHHHHHHHHHHHcCHHHHHhccCCCCChhHHHHHHHHhcCCCCceEEEEEEecCCCcEEEEEEEEecCCCc-EE
Confidence 67999999999999999754322211 11112 22333331 2 344444 678999999998543333 77
Q ss_pred EeeEEEcc-CCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee--c-ccccccccCeeecCc
Q 007903 516 VAAIGVSP-ECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR--G-RTHSYYRLKFNCSSK 576 (585)
Q Consensus 516 I~~L~V~P-eyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~--~-~a~~YYrlGF~~~~~ 576 (585)
+ .++|.| +|||+|+|++|++.++ +++++.++......... . ..+.|.++||+..+.
T Consensus 93 i-~~~v~~~~~rg~Gig~~ll~~~~----~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~g~ 152 (164)
T 3eo4_A 93 I-GILIGEFFLWGKHIGRHSVSLVL----KWLKNIGYKKAHARILENNIRSIKLFESLGFKKTKK 152 (164)
T ss_dssp E-EEEECSTTSTTSSHHHHHHHHHH----HHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEEEE
T ss_pred E-EEEEcCHHHcCccHHHHHHHHHH----HHHHhCCCcEEEEEeCCCCHHHHHHHHHCCCEEEee
Confidence 7 689999 9999999999999999 88888898875433222 2 333455899998753
|
| >1s7k_A Acetyl transferase; GNAT; 1.80A {Salmonella typhimurium} SCOP: d.108.1.1 PDB: 1s7l_A* 1s7n_A* 1s7f_A 1z9u_A | Back alignment and structure |
|---|
Probab=98.97 E-value=3.1e-09 Score=97.52 Aligned_cols=124 Identities=10% Similarity=0.066 Sum_probs=82.4
Q ss_pred ccccccccccCHHHHHHHHHHHHHc--cc-c---ccCCH----HHHH-------hccCeEEEEEECCeEEEEEEEeeecc
Q 007903 448 YEGTRTAKVTDLSGIKQIIQPLVES--GA-L---VRRTD----EELL-------KALDSFYVVEREGQIIACAALFPFFK 510 (585)
Q Consensus 448 ~~~IR~at~~D~~~I~~Li~~~~~~--~~-~---~~~~~----e~l~-------~~i~~~~Va~~dg~IVG~~~l~~~~~ 510 (585)
...||+++++|++.+.+++...... .+ . .+.+. +.+. .....+++++.+|++||++.+.....
T Consensus 13 ~~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~ 92 (182)
T 1s7k_A 13 TLELRAADESHVPALHQLVLKNKAWLQQSLDWPQYVTSQEETRKHVQGNILLHQRGYAKMYLIFCQNEMAGVLSFNAIEP 92 (182)
T ss_dssp SEEEEECCGGGHHHHHHHHHHC-------------------CHHHHHHHHHHHHHTSCEEEEEEETTEEEEEEEEEEEET
T ss_pred cEEEEECCHHHHHHHHHHHHhCHHHhhccCCCccccCCHHHHHHHHHHHHHHHhcCCceEEEEEECCEEEEEEEEEEccC
Confidence 3679999999999999997532211 00 0 01111 1121 11246788889999999999985432
Q ss_pred -CCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHH-cCCcccCcccee--ccc-ccccccCeeecCc
Q 007903 511 -EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRY-DHISTNGFPFLR--GRT-HSYYRLKFNCSSK 576 (585)
Q Consensus 511 -~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~-~gi~~~g~~~~~--~~a-~~YYrlGF~~~~~ 576 (585)
...+++. ++|+|+|||+|+|++|++.++ +++++ .++......... ..+ ..|.++||+..+.
T Consensus 93 ~~~~~~i~-~~v~~~~rg~Gig~~ll~~~~----~~a~~~~~~~~i~~~~~~~N~~a~~~y~k~Gf~~~~~ 158 (182)
T 1s7k_A 93 INKAAYIG-YWLDESFQGQGIMSQSLQALM----THYARRGDIRRFVIKCRVDNQASNAVARRNHFTLEGC 158 (182)
T ss_dssp TTTEEEEE-EEECGGGCSSSHHHHHHHHHH----HHHHHHCSCCEEEEEEETTCHHHHHHHHHTTCEEEEE
T ss_pred CCceEEEE-EEECHhhcCCCHHHHHHHHHH----HHHHhhCCccEEEEEecCCCHHHHHHHHHCCCEEEee
Confidence 3566775 799999999999999999999 88876 788764333222 123 3455799997643
|
| >2ozg_A GCN5-related N-acetyltransferase; YP_325469.1, acetyltransfe (GNAT) family, structural genomics, joint center for struct genomics, JCSG; HET: COA; 2.00A {Anabaena variabilis} SCOP: d.106.1.4 d.108.1.10 | Back alignment and structure |
|---|
Probab=98.96 E-value=1.4e-09 Score=115.04 Aligned_cols=118 Identities=21% Similarity=0.342 Sum_probs=87.3
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHH---hccCeEEEEEECCeEEEEEEEeeec------cCCceEEeeE
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELL---KALDSFYVVEREGQIIACAALFPFF------KEKCGEVAAI 519 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~---~~i~~~~Va~~dg~IVG~~~l~~~~------~~~~aeI~~L 519 (585)
++||+++++|++.+.++.... +..+++.+.+. .....+++++.+|++||++.+.+.. ..+.+.|..+
T Consensus 10 ~~iR~~~~~D~~~i~~l~~~~----~~~~~~~~~~~~~~~~~~~~~va~~~g~~vG~~~~~~~~~~~~g~~~~~~~i~~v 85 (396)
T 2ozg_A 10 FKYTKASQENIQQLGNILEQC----FVMSFGDSEIYVKGIGLENFRVIYREQKVAGGLAILPMGQWWGGQRVPMAGIAAV 85 (396)
T ss_dssp EEEEECCTTTHHHHHHHHHHH----TTCCTTHHHHHHHHHCGGGEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred eEEEECCHHHHHHHHHHHHHH----cCCCCChHHHHhhhcccCcEEEEEECCEEEEEEEEEeccceECCeecceeEEEEE
Confidence 579999999999999996543 22233333333 2222388889999999999998542 2256789999
Q ss_pred EEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceeccccc-ccccCeeecCcc
Q 007903 520 GVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHS-YYRLKFNCSSKS 577 (585)
Q Consensus 520 ~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~-YYrlGF~~~~~~ 577 (585)
+|+|+|||+|+|++||++++ +++++.|+....+ ...... |.++||+..+..
T Consensus 86 ~V~p~~Rg~Gig~~Ll~~~~----~~~~~~g~~~i~l---n~~a~~~Y~~~GF~~~~~~ 137 (396)
T 2ozg_A 86 GIAPEYRGDGAAIALIQHTL----QEISEQDIPISVL---YPATQRLYRKAGYEQAGSS 137 (396)
T ss_dssp EECGGGTTSSHHHHHHHHHH----HHHHHTTCCEEEE---CCSCHHHHHHTTCEEEEEE
T ss_pred EEChhhccCCHHHHHHHHHH----HHHHHCCCeEEEE---ccccHHHHHhcCCeEcccE
Confidence 99999999999999999999 8888888766443 334444 557999987543
|
| >2fsr_A Acetyltransferase; alpha-beta-sandwich, structural genomics, PSI, protein struc initiative, midwest center for structural genomics; HET: PEG; 1.52A {Agrobacterium tumefaciens str} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=98.96 E-value=2.9e-09 Score=101.08 Aligned_cols=123 Identities=8% Similarity=-0.073 Sum_probs=83.7
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHHhcc-----------CeEEEEE--ECCeEEEEEEEeeeccCCceE
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL-----------DSFYVVE--REGQIIACAALFPFFKEKCGE 515 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i-----------~~~~Va~--~dg~IVG~~~l~~~~~~~~ae 515 (585)
..||+++++|++.+.+++..........+++.++....+ ..++++. .+|++||++.+........++
T Consensus 35 l~iR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~~iG~~~~~~~~~~~~~~ 114 (195)
T 2fsr_A 35 LTLRPLAMADFPAYRDFMASPRSTGVGGPYDLPSTWGVFCHDLANWHFFGHGALMIDLGETGECIGQIGINHGPLFPEKE 114 (195)
T ss_dssp EEEECCCGGGHHHHHHHHHSGGGGGGTCCCCHHHHHHHHHHHHHHHHHHSCCEEEEEETTTTEEEEEEEEECSTTCSSCE
T ss_pred EEEEcCCHHHHHHHHHHHcCCCceecCCCCCHHHHHHHHHHHHhccccCCceEEEEEECCCCCEEEEEeeEecCCCCeEE
Confidence 579999999999999997543331111233333322111 2244444 478999999987543456778
Q ss_pred EeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHH-cCCcccCcccee--cccc-cccccCeeecCc
Q 007903 516 VAAIGVSPECRGQGQGDKLLGLCIWPLLSETRY-DHISTNGFPFLR--GRTH-SYYRLKFNCSSK 576 (585)
Q Consensus 516 I~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~-~gi~~~g~~~~~--~~a~-~YYrlGF~~~~~ 576 (585)
| .++|+|+|||+|||++|++.++ +++++ .++......... ..+. .|.++||+..+.
T Consensus 115 i-~~~v~p~~rg~Gig~~ll~~~~----~~a~~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~g~ 174 (195)
T 2fsr_A 115 L-GWLLYEGHEGRGYAAEAAVALR----DWAFETLNLPTLVSYVSPQNRKSAAVAERIGGTLDPL 174 (195)
T ss_dssp E-EEEECTTCTTSSHHHHHHHHHH----HHHHHHSCCSCEEEEECTTCHHHHHHHHHTTCEECTT
T ss_pred E-EEEEChhHcCCChHHHHHHHHH----HHHHhhCCccEEEEEECCCCHHHHHHHHHCCCEEEee
Confidence 8 7899999999999999999999 88877 688764332221 2333 455899998764
|
| >3r9f_A MCCE protein; microcin C7, acetyltransferase, SELF immunity, resistance, A coenzyme A, transferase; HET: COA GSU; 1.20A {Escherichia coli} PDB: 3r95_A* 3r96_A* 3r9e_A* 3r9g_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=7.7e-09 Score=96.20 Aligned_cols=124 Identities=8% Similarity=-0.016 Sum_probs=85.7
Q ss_pred ccccccccccCHHHHHHHHHHH--HHccc-c--cc-CCHHHHHhcc-----------CeEEEEEECCeEEEEEEEeeec-
Q 007903 448 YEGTRTAKVTDLSGIKQIIQPL--VESGA-L--VR-RTDEELLKAL-----------DSFYVVEREGQIIACAALFPFF- 509 (585)
Q Consensus 448 ~~~IR~at~~D~~~I~~Li~~~--~~~~~-~--~~-~~~e~l~~~i-----------~~~~Va~~dg~IVG~~~l~~~~- 509 (585)
...||+++++|++.+.+++... ....+ . .+ .+.+.....+ ..++++..++++||++.+....
T Consensus 21 ~l~lr~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iG~~~~~~~~~ 100 (188)
T 3r9f_A 21 EITLLYPALKYAEELYLLINQNKINFIKSMAWPAFVNNISDSVSFIEQSMIDNQNEKALILFIKYKTKIAGVVSFNIIDH 100 (188)
T ss_dssp SEEEECCCGGGHHHHHHHHHHHHHHHHTTCSGGGGCCSHHHHHHHHHHHHHHHHTTSCEEEEEEETTEEEEEEEEEEEET
T ss_pred cEEEEeCCHHHHHHHHHHHhcChHHHHhcCCCCCCCCCHHHHHHHHHHHHHHhhccCeEEEEEEECCEEEEEEEEEEecC
Confidence 3679999999999999997642 11111 1 11 2444333222 3467888899999999987432
Q ss_pred cCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHc-CCcccCcccee--c-ccccccccCeeecCc
Q 007903 510 KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYD-HISTNGFPFLR--G-RTHSYYRLKFNCSSK 576 (585)
Q Consensus 510 ~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~-gi~~~g~~~~~--~-~a~~YYrlGF~~~~~ 576 (585)
....++|. ++|+|+|||+|+|++|++.++ +++.+. ++......... . ..+.|.++||+..+.
T Consensus 101 ~~~~~~i~-~~v~~~~~g~Gig~~ll~~~~----~~a~~~~~~~~i~~~v~~~N~~a~~~y~k~GF~~~g~ 166 (188)
T 3r9f_A 101 ANKTAYIG-YWLGANFQGKGIVTNAINKLI----QEYGDSGVIKRFVIKCIVDNKKSNATALRCGFTLEGV 166 (188)
T ss_dssp TTTEEEEE-EEECGGGTTSSHHHHHHHHHH----HHHHTTTSCSEEEEEEETTCHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEE-EEEChhhcCCCHHHHHHHHHH----HHHHHhcCeEEEEEEecCCCHHHHHHHHHCCCeEEeE
Confidence 35678886 699999999999999999999 888665 77764332222 2 333466899997653
|
| >1nsl_A Probable acetyltransferase; structural genomics, hexamer, alpha-beta, PSI, protein struc initiative, midwest center for structural genomics; 2.70A {Bacillus subtilis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=98.91 E-value=4.4e-09 Score=96.83 Aligned_cols=123 Identities=11% Similarity=0.027 Sum_probs=83.5
Q ss_pred cccccccccCHHHHHHHHHHHHHc--ccc----ccCCHHHHHh-cc-----------CeEEEEEECCeEEEEEEEeeec-
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVES--GAL----VRRTDEELLK-AL-----------DSFYVVEREGQIIACAALFPFF- 509 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~--~~~----~~~~~e~l~~-~i-----------~~~~Va~~dg~IVG~~~l~~~~- 509 (585)
..||+++++|++.+.+++...... .+. .+.+.+.... .+ ..++++..+|++||++.+....
T Consensus 11 ~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~ 90 (184)
T 1nsl_A 11 ITIRLLEPKDAERLAELIIQNQQRLGKWLFFAENPSSADTYRETIIPDWRRQYADLNGIEAGLLYDGSLCGMISLHNLDQ 90 (184)
T ss_dssp EEEEECCGGGHHHHHHHHHTTTTTTTTTSCC----CCHHHHHHTHHHHHHHHHHTTSCEEEEEEETTEEEEEEEEEEEET
T ss_pred EEEEeCCHHHHHHHHHHHHcCHHHHhhcccccCCCCCHHHHHHHHHHHHHHhhhccCceEEEEEECCEEEEEEEEEeccc
Confidence 579999999999999996542111 111 1123333332 11 4678888899999999987533
Q ss_pred cCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHH-HcCCcccCcccee--ccc-ccccccCeeecCc
Q 007903 510 KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETR-YDHISTNGFPFLR--GRT-HSYYRLKFNCSSK 576 (585)
Q Consensus 510 ~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~-~~gi~~~g~~~~~--~~a-~~YYrlGF~~~~~ 576 (585)
....+++. ++|+|+|||+|+|++|++.++ +++. +.++......... ..+ ..|.++||+..+.
T Consensus 91 ~~~~~~i~-~~v~p~~rg~Gig~~ll~~~~----~~a~~~~g~~~i~~~~~~~N~~a~~~y~k~Gf~~~~~ 156 (184)
T 1nsl_A 91 VNRKAEIG-YWIAKEFEGKGIITAACRKLI----TYAFEELELNRVAICAAVGNEKSRAVPERIGFLEEGK 156 (184)
T ss_dssp TTTEEEEE-EEECGGGTTSSHHHHHHHHHH----HHHHHTSCCSEEEEEEETTCHHHHHHHHHHTCEEEEE
T ss_pred ccCeEEEE-EEEChhhcCCCHHHHHHHHHH----HHHHHhcCcEEEEEEEecCCHHHHHHHHHcCCEEEEE
Confidence 23466774 699999999999999999999 8884 5788764332221 223 3455899997643
|
| >1yre_A Hypothetical protein PA3270; APC5563, midwest center for structural genomics, MSC protein structure initiative, PSI, MCSG; HET: COA; 2.15A {Pseudomonas aeruginosa} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=98.90 E-value=5.5e-09 Score=98.14 Aligned_cols=124 Identities=8% Similarity=-0.017 Sum_probs=83.6
Q ss_pred ccccccccccCHHHHHHHHHHHHHcccc-c--cCCHHHHHhc-------cCeEEEEEECCeEEEEEEEeeec-cCCceEE
Q 007903 448 YEGTRTAKVTDLSGIKQIIQPLVESGAL-V--RRTDEELLKA-------LDSFYVVEREGQIIACAALFPFF-KEKCGEV 516 (585)
Q Consensus 448 ~~~IR~at~~D~~~I~~Li~~~~~~~~~-~--~~~~e~l~~~-------i~~~~Va~~dg~IVG~~~l~~~~-~~~~aeI 516 (585)
...||+++++|++.+ +++......... . +...+.+... -...+++..+|++||++.+.... ....++|
T Consensus 21 ~i~lr~~~~~D~~~l-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iG~~~~~~~~~~~~~~~i 99 (197)
T 1yre_A 21 ALRLEPLVEADIPEL-VSLAEANREALQYMDGPTRPDWYRQSLAEQREGRALPLAVRLGVQLVGTTRFAEFLPALPACEI 99 (197)
T ss_dssp TEEEEECCGGGHHHH-HHHHHTTTTTTTTSSSTTSHHHHHHHHHHHHTTSEEEEEEEETTEEEEEEEEEEEETTTTEEEE
T ss_pred cEEEecCChhhHHHH-HhhcChhhhhccCCCchhHHHHHHHHHHhhccCCeEEEEEEECCeEEEEEEEEeecCCcCeeEE
Confidence 357999999999999 997432211111 1 1112222211 12356666899999999987433 3457899
Q ss_pred eeEEEccCCcCCcHHHHHHHHHHhhhHHHHHH-cCCcccCcccee--cccc-cccccCeeecCc
Q 007903 517 AAIGVSPECRGQGQGDKLLGLCIWPLLSETRY-DHISTNGFPFLR--GRTH-SYYRLKFNCSSK 576 (585)
Q Consensus 517 ~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~-~gi~~~g~~~~~--~~a~-~YYrlGF~~~~~ 576 (585)
..++|+|+|||+|+|++|++.++ +++.+ .++......... ..+. .|.++||+..+.
T Consensus 100 ~~l~v~~~~rg~Gig~~ll~~~~----~~a~~~~g~~~i~~~v~~~N~~a~~~y~k~GF~~~g~ 159 (197)
T 1yre_A 100 GWTWLDQAQHGSGLNRMIKYLML----KHAFDNLRMVRVQLSTAASNLRAQGAIDKLGAQREGV 159 (197)
T ss_dssp EEEEECGGGTTTTHHHHHHHHHH----HHHHHTSCCSEEEEEEETTCHHHHHHHHHHTCEEEEE
T ss_pred EEEEECHhHhcCCHHHHHHHHHH----HHHHhhcCccEEEEEEcCCCHHHHHHHHHcCCeeeee
Confidence 88899999999999999999999 88887 788765333222 2333 455799997643
|
| >3tt2_A GCN5-related N-acetyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta sandwich; HET: MES; 2.73A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=98.89 E-value=3.3e-09 Score=107.60 Aligned_cols=124 Identities=12% Similarity=0.018 Sum_probs=90.4
Q ss_pred cccccccccC-HHHHHHHHHHHHHccc-cccCCHHHHHhcc-------CeEEEEEECCeEEEEEEEeeeccCCceEEeeE
Q 007903 449 EGTRTAKVTD-LSGIKQIIQPLVESGA-LVRRTDEELLKAL-------DSFYVVEREGQIIACAALFPFFKEKCGEVAAI 519 (585)
Q Consensus 449 ~~IR~at~~D-~~~I~~Li~~~~~~~~-~~~~~~e~l~~~i-------~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L 519 (585)
..||+++++| ++.+.++........+ ..+.+.+.+...+ ..++++..+|++||++.+......+.++|..+
T Consensus 173 ~~ir~~~~~dd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~g~~vG~~~~~~~~~~~~~~i~~~ 252 (330)
T 3tt2_A 173 ITARTFVPGLDERATYEAVEEAFGDIWGRPPSTFERWLSMTQSERKDPELWLLAVETDSGHIVGTCLGQETAGKGWIGSV 252 (330)
T ss_dssp EEEEECCTTTSHHHHHHHHHHHTC----CCCCCHHHHHHHHTTGGGCGGGEEEEEETTTTEEEEEEEEEEETTEEEEEEE
T ss_pred eEEEecCcccchHHHHHHHHHHHHHhcCCCCCCHHHHHHHhhCCCCCccEEEEEEECCEEEEEEEEecCCCCCcEEEEEe
Confidence 4799999999 9999999665443322 1234555554221 45888899999999999885334568999999
Q ss_pred EEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccce--e-ccccc-ccccCeeecCc
Q 007903 520 GVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFL--R-GRTHS-YYRLKFNCSSK 576 (585)
Q Consensus 520 ~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~--~-~~a~~-YYrlGF~~~~~ 576 (585)
+|+|+|||+|+|++|+.+++ +++++.|+....+... + ..+.. |.++||+..+.
T Consensus 253 ~v~p~~rg~G~g~~Ll~~~~----~~~~~~g~~~i~l~v~~~n~~~a~~~y~~~GF~~~~~ 309 (330)
T 3tt2_A 253 GVRRPWRGRGIALALLQEVF----GVYYRRGVREVELSVDAESRTGAPRLYRRAGMHVKHR 309 (330)
T ss_dssp EECGGGTTSSHHHHHHHHHH----HHHHHHTCCEEEEEEEEETTTCSCHHHHHTTCEEEEE
T ss_pred eECHHHhhcCHHHHHHHHHH----HHHHHcCCCeEEEEEecCCChhHHHHHHHcCCEEeEE
Confidence 99999999999999999999 8888888876543222 2 23444 55799998753
|
| >3tt2_A GCN5-related N-acetyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta sandwich; HET: MES; 2.73A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=98.89 E-value=3.7e-09 Score=107.25 Aligned_cols=125 Identities=17% Similarity=0.111 Sum_probs=86.1
Q ss_pred cccccccccCHHHHHHHHHHHHHcccc-ccCCHHHHHhcc-------CeEEEEEECCeEEEEEEEeeeccCCceEEeeEE
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGAL-VRRTDEELLKAL-------DSFYVVEREGQIIACAALFPFFKEKCGEVAAIG 520 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~-~~~~~e~l~~~i-------~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~ 520 (585)
+.||+++++|++++.+|+......... ...+.+.+...+ ..+++++.+|++||++.+.. ......+..++
T Consensus 13 ~~iR~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vG~~~~~~--~~~~~~~~~~~ 90 (330)
T 3tt2_A 13 FIARAPVPADAPAIARLIAACQEADGDEPDASAEEVLRDWEGLDLGQEAVLVVAPDGEAAAYADVLN--RRYVQLSVYGY 90 (330)
T ss_dssp CEEECCCGGGHHHHHHHHHHHHHHTTCCCCCCHHHHHHHTTTSCHHHHEEEEECTTSSEEEEEEEEE--ETTTEEEEEEE
T ss_pred eeeCCCChHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHhhccCcccceEEEECCCCcEEEEEEEEe--cCCeEEEEEEE
Confidence 579999999999999998776544332 334555555443 36778888899999999863 23455566799
Q ss_pred EccCCcCCcHHHHHHHHHHhhhHHHHHHcCC-------cccCccce--eccccc-ccccCeeecCcccc
Q 007903 521 VSPECRGQGQGDKLLGLCIWPLLSETRYDHI-------STNGFPFL--RGRTHS-YYRLKFNCSSKSFH 579 (585)
Q Consensus 521 V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi-------~~~g~~~~--~~~a~~-YYrlGF~~~~~~~~ 579 (585)
|+|+|||+|||++||++++ +++++.+. ........ +..+.. |.++||......+.
T Consensus 91 V~p~~rg~Gig~~Ll~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~~y~~~Gf~~~~~~~~ 155 (330)
T 3tt2_A 91 VHPRFRGMGLGTWLVQWGE----EWIQDRMHLAPAEAQVTVQHYIRASSTSALRLMEQHGYRPVRDIWV 155 (330)
T ss_dssp ECTTSTTSSHHHHHHHHHH----HHHHHHGGGSCTTBCEEEEEEEETTCHHHHHHHHHTTCEEEEEEEE
T ss_pred ECccccCccHHHHHHHHHH----HHHHHHHHhCCCCCcEEEEeccccCChHHHHHHHhCCCceEEEEEE
Confidence 9999999999999999999 77766521 11101111 122334 44799998655443
|
| >3pzj_A Probable acetyltransferases; MCSG, PSI-2, structural genomics, protein structure initiati midwest center for structural genomics; HET: MSE; 1.85A {Chromobacterium violaceum} | Back alignment and structure |
|---|
Probab=98.87 E-value=4e-09 Score=100.92 Aligned_cols=125 Identities=10% Similarity=0.062 Sum_probs=86.6
Q ss_pred cccccccccc-CHHHHHHHHHHHHH-cccc---ccCCHHHHHhcc--------CeEEEEE--ECCeEEEEEEEeeec-cC
Q 007903 448 YEGTRTAKVT-DLSGIKQIIQPLVE-SGAL---VRRTDEELLKAL--------DSFYVVE--REGQIIACAALFPFF-KE 511 (585)
Q Consensus 448 ~~~IR~at~~-D~~~I~~Li~~~~~-~~~~---~~~~~e~l~~~i--------~~~~Va~--~dg~IVG~~~l~~~~-~~ 511 (585)
...||+++++ |++.+.+++..... ..+. ...+.+.+...+ ..+|++. .+|++||++.+.... ..
T Consensus 38 ~l~lr~~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~iG~~~l~~~~~~~ 117 (209)
T 3pzj_A 38 AVSLQPLDAPRHGAALFRLFAGDDSHWEHLPYGPFEDEDAFITWLALTVAQSDTALYVVCAKDSDQALGFLGYRQMVQAH 117 (209)
T ss_dssp SEEEEECCHHHHHHHHHHHHHTCGGGGTTSSSCCCSSHHHHHHHHHHHHHSTTCEEEEEEETTCCCCCEEEEEEEEEGGG
T ss_pred eEEEEECCcccCHHHHHHHHcCCHHHHhhCCCCCCCCHHHHHHHHHHHhcCCCcEEEEEEECCCCcEEEEEEeeeecCcC
Confidence 3679999999 99999998653211 1111 112444443332 3455555 489999999986432 35
Q ss_pred CceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee--c-ccccccccCeeecCc
Q 007903 512 KCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR--G-RTHSYYRLKFNCSSK 576 (585)
Q Consensus 512 ~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~--~-~a~~YYrlGF~~~~~ 576 (585)
..++|..++|+|+|||+|+|++|++.++ +++.+.|+......... . ....|.++||+..+.
T Consensus 118 ~~~ei~~~~v~~~~~g~Gig~~ll~~l~----~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~g~ 181 (209)
T 3pzj_A 118 GAIEIGHVNFSPALRRTRLATEAVFLLL----KTAFELGYRRCEWRCDSRNAASAAAARRFGFQFEGT 181 (209)
T ss_dssp TEEEEEEEEECTTTTTSHHHHHHHHHHH----HHHHHTTCSEEEEEEETTCHHHHHHHHHHTCEEEEE
T ss_pred CeEEEEEEEECHHHhcCCHHHHHHHHHH----HHHHHcCCcEEEEeecCCCHHHHHHHHHCCCEEeee
Confidence 6789998899999999999999999999 88888888865433222 2 233455899997643
|
| >4fd7_A Putative arylalkylamine N-acetyltransferase 7; GNAT, COA binding; 1.80A {Aedes aegypti} | Back alignment and structure |
|---|
Probab=98.87 E-value=1.9e-09 Score=106.26 Aligned_cols=123 Identities=13% Similarity=0.087 Sum_probs=80.8
Q ss_pred cccccccccCHHHHHHHHHHHHH-cc-c----c---ccCCHHHHHhc----c--CeEEEEEE--CCeEEEEEEEeeecc-
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVE-SG-A----L---VRRTDEELLKA----L--DSFYVVER--EGQIIACAALFPFFK- 510 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~-~~-~----~---~~~~~e~l~~~----i--~~~~Va~~--dg~IVG~~~l~~~~~- 510 (585)
..||+++++|++++.+++..... .. . . .+.+.+.+... + ...+|+.+ +|+|||++.+.+...
T Consensus 31 ~~IR~~~~~D~~~i~~~l~~~f~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~g~IVG~a~~~~~~~~ 110 (238)
T 4fd7_A 31 YRVQDLPEDRFEDAIRHMCDYFARDELMNQAKGLAKDLVAMGDVVALWKAMLPDRMSLVCFREGSDEIVGVNILDVASRS 110 (238)
T ss_dssp EEEEECCGGGHHHHHHHHHHTHHHHSHHHHHHTGGGCHHHHHHHHHHHHHHGGGSCCEEEEETTCCSEEEEEEEEEEETT
T ss_pred EEEEECCHHHHHHHHHHHHhhccCcChhhHHhCCCCChhhHHHHHHHHHHHHhCCcEEEEEECCCCcEEEEEEecccCcc
Confidence 57999999999999998754321 11 0 0 01111222211 1 44566654 569999998875322
Q ss_pred ----------------------------------CCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCc
Q 007903 511 ----------------------------------EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGF 556 (585)
Q Consensus 511 ----------------------------------~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~ 556 (585)
+...++..++|+|+|||+|||++|+++++ +.+++.|+.....
T Consensus 111 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~p~~rg~Gig~~L~~~~~----~~~~~~g~~~~~~ 186 (238)
T 4fd7_A 111 DKDNAQFNSAIFQAIYDTIEYVSHQANIFDRYNVDHYLNAMGLSVDPKYRGRGIATEILRARI----PLCRAVGLKLSAT 186 (238)
T ss_dssp CCCCCCCSCHHHHHHHHHHHHHHHHHTHHHHHTCSEEEEEEEEEECGGGTTSSHHHHHHHTHH----HHHHHHTCCEEEE
T ss_pred cccccccCCHHHHHHHHHHHHHHhhCcHHHhcCCCcEEEEEEEEECHHHcCCCHHHHHHHHHH----HHHHHcCCcEEEE
Confidence 12345677999999999999999999999 8899999875322
Q ss_pred cceeccc-ccccccCeeecC
Q 007903 557 PFLRGRT-HSYYRLKFNCSS 575 (585)
Q Consensus 557 ~~~~~~a-~~YYrlGF~~~~ 575 (585)
...+..+ ..|.++||+..+
T Consensus 187 ~~~n~~a~~~y~k~GF~~~~ 206 (238)
T 4fd7_A 187 CFTGPNSQTAATRVGFQEDF 206 (238)
T ss_dssp EECSHHHHHHHHHHTCEEEE
T ss_pred EcCCHHHHHHHHHCCCEEEE
Confidence 1112223 345579999874
|
| >1yvk_A Hypothetical protein BSU33890; ALPHS-beta protein, structural genomics, PSI, protein structure initiative; HET: COA; 3.01A {Bacillus subtilis subsp} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=98.87 E-value=6.7e-09 Score=95.90 Aligned_cols=91 Identities=14% Similarity=0.135 Sum_probs=70.1
Q ss_pred HHHHHhcc--CeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcc
Q 007903 480 DEELLKAL--DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFP 557 (585)
Q Consensus 480 ~e~l~~~i--~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~ 557 (585)
.+.+...+ ..++++..++++||++.+.. .....++|..++|+|+|||+|+|++|+++++ +++++.|+......
T Consensus 29 ~~~~~~~l~~~~~~v~~~~~~~vG~~~~~~-~~~~~~~i~~~~V~p~~rg~Gig~~Ll~~~~----~~~~~~g~~~i~l~ 103 (163)
T 1yvk_A 29 KDIVDEYLERGECYTAWAGDELAGVYVLLK-TRPQTVEIVNIAVKESLQKKGFGKQLVLDAI----EKAKKLGADTIEIG 103 (163)
T ss_dssp HHHHHHHHHHSEEEEEEETTEEEEEEEEEE-CSTTEEEEEEEEECGGGTTSSHHHHHHHHHH----HHHHHTTCSEEEEE
T ss_pred HHHHHHHhcCCeEEEEEECCEEEEEEEEEe-cCCCeEEEEEEEECHHHhCCCHHHHHHHHHH----HHHHHCCCCEEEEE
Confidence 44444444 67888999999999999884 3567899999999999999999999999999 88888888765433
Q ss_pred ceecc--cc-cccccCeeecC
Q 007903 558 FLRGR--TH-SYYRLKFNCSS 575 (585)
Q Consensus 558 ~~~~~--a~-~YYrlGF~~~~ 575 (585)
..... +. .|.++||+..+
T Consensus 104 ~~~~n~~a~~~y~k~GF~~~~ 124 (163)
T 1yvk_A 104 TGNSSIHQLSLYQKCGFRIQA 124 (163)
T ss_dssp EETTCHHHHHHHHHTTCEEEE
T ss_pred cCCCCHHHHHHHHHCCCEEec
Confidence 22222 33 45579999875
|
| >2z10_A Ribosomal-protein-alanine acetyltransferase; alpha/beta protein, acyltransferase, structural genomics, NPPSFA; HET: IYR; 1.77A {Thermus thermophilus} PDB: 2z0z_A* 2z11_A* 2zxv_A* | Back alignment and structure |
|---|
Probab=98.86 E-value=6.7e-09 Score=97.46 Aligned_cols=122 Identities=8% Similarity=-0.081 Sum_probs=83.3
Q ss_pred cccccccccCHHHHHHHHHHHHHcccc---ccCCH-HHHHhcc--------CeEEEEEECCeEEEEEEEeeec-cCCceE
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGAL---VRRTD-EELLKAL--------DSFYVVEREGQIIACAALFPFF-KEKCGE 515 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~---~~~~~-e~l~~~i--------~~~~Va~~dg~IVG~~~l~~~~-~~~~ae 515 (585)
..||+++++|++.+.++ .......+. .+.+. +.....+ ..+|++..+|++||++.+.... ....++
T Consensus 13 ~~ir~~~~~D~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~vG~~~~~~~~~~~~~~~ 91 (194)
T 2z10_A 13 VRLEPLALAHLPAFLRH-YDPEVYRFLSRAPVAPTEEALRAHLEGLLGEPGRVNWAILFGKEVAGRISVIAPEPEHAKLE 91 (194)
T ss_dssp EEEEECCGGGHHHHHHT-CCHHHHTTSTTCCSSSSHHHHHHHHHHHHHSTTCEEEEEEETTEEEEEEEEEEEEGGGTEEE
T ss_pred EEEeeCCHHHHHHHHHh-cCHHHHHhcCCCCCCChHHHHHHHHHHhhcCCCceEEEEecCCCEEEEEEecccCcccCEEE
Confidence 57999999999999998 433322221 12222 3222221 3567778899999999987432 345788
Q ss_pred EeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHc-CCcccCcccee--c-ccccccccCeeecCc
Q 007903 516 VAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYD-HISTNGFPFLR--G-RTHSYYRLKFNCSSK 576 (585)
Q Consensus 516 I~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~-gi~~~g~~~~~--~-~a~~YYrlGF~~~~~ 576 (585)
|..+++ |+|||+|+|++|++.++ +++.+. |+......... . ..+.|.++||+..+.
T Consensus 92 i~~~~~-p~~rg~Gig~~ll~~~~----~~a~~~~g~~~i~~~v~~~N~~a~~~y~k~GF~~~g~ 151 (194)
T 2z10_A 92 LGTMLF-KPFWGSPANKEAKYLLL----RHAFEVLRAERVQFKVDLRNERSQRALEALGAVREGV 151 (194)
T ss_dssp EEEEEC-GGGTTSSHHHHHHHHHH----HHHHHTSCCSEEEEEEETTCHHHHHHHHHHTCEEEEE
T ss_pred EeeEEC-HhHhCCcHHHHHHHHHH----HHHHhhCCceEEEEEecCCCHHHHHHHHHcCCcEEEe
Confidence 877677 99999999999999999 888776 88764333222 2 233455899997654
|
| >3c26_A Putative acetyltransferase TA0821; NP_394282.1, A putative acetyltransferase, acetyltransferase family, structural genomics; 2.00A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=98.85 E-value=1.9e-09 Score=108.97 Aligned_cols=122 Identities=17% Similarity=0.163 Sum_probs=86.0
Q ss_pred cccccccccCHHHHHHHHHHHHHcc-----c----cc----cCCHHHHHhcc--CeEEEEEECCeEEEEEEEeeeccCCc
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESG-----A----LV----RRTDEELLKAL--DSFYVVEREGQIIACAALFPFFKEKC 513 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~-----~----~~----~~~~e~l~~~i--~~~~Va~~dg~IVG~~~l~~~~~~~~ 513 (585)
..||+++++|++.+.++........ + .. .+..+.+...+ ..++++..+|++||++.+... ..+.
T Consensus 6 i~IR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~va~~~g~iVG~~~~~~~-~~~~ 84 (266)
T 3c26_A 6 IVFDRGSPSDIDEIKTFTSNTWKVGYYTDLYSKLADTGTMDDYVDKVIERWVNDGSVYVLRVSGRPVATIHMEKL-PDGS 84 (266)
T ss_dssp CEEEECCGGGHHHHTTCBSCCSCTTHHHHHHHHHHTTSSHHHHHHHHHHHHHHTTCEEEEEETTEEEEEEEEEEC-TTSC
T ss_pred EEEEECCHHHHHHHHHHHHHHhhcccccccccccccchhhhHHHHHHHHHhccCCcEEEEEECCEEEEEEEEEEc-CCCe
Confidence 5799999999999998843221110 0 00 01112222222 568888999999999999853 3678
Q ss_pred eEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee--ccc-ccccccCeeecCc
Q 007903 514 GEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR--GRT-HSYYRLKFNCSSK 576 (585)
Q Consensus 514 aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~--~~a-~~YYrlGF~~~~~ 576 (585)
++|..++|+|+|||+|+|++|+++++ +++++.|+... ..... ..+ ..|.++||+..+.
T Consensus 85 ~~I~~l~V~p~~rg~GiG~~Ll~~~~----~~a~~~g~~~i-l~v~~~N~~a~~~Yek~GF~~~~~ 145 (266)
T 3c26_A 85 VMLGGLRVHPEYRGSRLGMSIMQETI----QFLRGKTERLR-SAVYSWNEPSLRLVHRLGFHQVEE 145 (266)
T ss_dssp EEEEEEEECGGGTTSSHHHHHHHHHH----HHHBTTBSEEE-EEEETTCHHHHHHHHHHTCEEEEE
T ss_pred EEEEEEEEChhhcCCCHHHHHHHHHH----HHHHHcCCCEE-EEEcCCCHHHHHHHHHCCCEEeeE
Confidence 99999999999999999999999999 88888888766 43222 123 3455899997754
|
| >2fck_A Ribosomal-protein-serine acetyltransferase, putat; ribosomal-protein structural genomics, PSI, protein structure initiative; HET: MSE; 1.70A {Vibrio cholerae o1 biovar eltor} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=98.84 E-value=7.3e-09 Score=95.06 Aligned_cols=123 Identities=11% Similarity=-0.015 Sum_probs=82.0
Q ss_pred cccccccccCHHHHHHH-HHHHHHccc----cccCCHHHHHhcc-----------CeEEEEEE--CCeEEEEEEEeeec-
Q 007903 449 EGTRTAKVTDLSGIKQI-IQPLVESGA----LVRRTDEELLKAL-----------DSFYVVER--EGQIIACAALFPFF- 509 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~L-i~~~~~~~~----~~~~~~e~l~~~i-----------~~~~Va~~--dg~IVG~~~l~~~~- 509 (585)
..||+++++|++.+.++ ........+ ..+.+.+.....+ ...+++.. +|++||++.+....
T Consensus 15 ~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~vG~~~~~~~~~ 94 (181)
T 2fck_A 15 LQLRLITADEAEELVQCIRQSQTLHQWVDWCHALFSQQEAEQFIQATRLNWVKAEAYGFGVFERQTQTLVGMVAINEFYH 94 (181)
T ss_dssp EEEECCCGGGHHHHHHHHHTCSSGGGTSCC----CCHHHHHHHHHHHHHHHHTTSCEEEEEEETTTCCEEEEEEEEEEEG
T ss_pred EEEEECchhhHHHHHHHHhCCHhHhcccCcCCCCCCHHHHHHHHHHHHHhhhcCCcEEEEEEECCCCcEEEEEEEEEecc
Confidence 57999999999999998 443221111 1122333332221 34566655 89999999987432
Q ss_pred cCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHc-CCcccCcccee--ccc-ccccccCeeecCc
Q 007903 510 KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYD-HISTNGFPFLR--GRT-HSYYRLKFNCSSK 576 (585)
Q Consensus 510 ~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~-gi~~~g~~~~~--~~a-~~YYrlGF~~~~~ 576 (585)
....++| .++|+|+|||+|+|++|++.++ +++++. ++......... ..+ ..|.++||+..+.
T Consensus 95 ~~~~~~i-~~~v~~~~rg~Gig~~ll~~~~----~~a~~~~g~~~i~~~~~~~N~~a~~~y~k~GF~~~~~ 160 (181)
T 2fck_A 95 TFNMASL-GYWIGDRYQRQGYGKEALTALI----LFCFERLELTRLEIVCDPENVPSQALALRCGANREQL 160 (181)
T ss_dssp GGTEEEE-EEEECHHHHTTTHHHHHHHHHH----HHHHHTSCCSEEEEEECTTCHHHHHHHHHTTCEEEEE
T ss_pred cCCeEEE-EEEEChhhcCCChHHHHHHHHH----HHHHHhcCceEEEEEEccCCHHHHHHHHHcCCEEEEE
Confidence 2456777 5899999999999999999999 888884 88764332221 223 3455899997753
|
| >3pp9_A Putative streptothricin acetyltransferase; toxin production resistance, infectious diseases, structural genomics; HET: MSE ACO; 1.60A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=98.82 E-value=7.8e-09 Score=96.27 Aligned_cols=87 Identities=16% Similarity=0.139 Sum_probs=68.2
Q ss_pred CeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee--cccc-
Q 007903 488 DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR--GRTH- 564 (585)
Q Consensus 488 ~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~--~~a~- 564 (585)
..+++++.+|++||++.+.+ ..++.++|..++|+|+|||+|+|++|+++++ +++++.|+......... ..+.
T Consensus 76 ~~~~v~~~~~~~vG~~~~~~-~~~~~~~i~~~~v~~~~rg~Gig~~ll~~~~----~~~~~~g~~~i~~~~~~~N~~a~~ 150 (187)
T 3pp9_A 76 QIIYIALLHNQIIGFIVLKK-NWNNYAYIEDITVDKKYRTLGVGKRLIAQAK----QWAKEGNMPGIMLETQNNNVAACK 150 (187)
T ss_dssp EEEEEEEETTEEEEEEEEEE-CTTSCEEEEEEEECGGGTTSSHHHHHHHHHH----HHHHHTTCCEEEEEEETTCHHHHH
T ss_pred cEEEEEEECCeEEEEEEEEc-CCCCeEEEEEEEECHHHhcCCHHHHHHHHHH----HHHHHCCCCEEEEEEecCCHHHHH
Confidence 35788899999999999984 4467889999999999999999999999999 88888888764333221 2233
Q ss_pred cccccCeeecCcccc
Q 007903 565 SYYRLKFNCSSKSFH 579 (585)
Q Consensus 565 ~YYrlGF~~~~~~~~ 579 (585)
.|.++||+..+....
T Consensus 151 ~y~k~Gf~~~~~~~~ 165 (187)
T 3pp9_A 151 FYEKCGFVIGGFDFL 165 (187)
T ss_dssp HHHHTTCEEEEEESS
T ss_pred HHHHCCCEEeceEee
Confidence 455799998865443
|
| >2pr1_A Uncharacterized N-acetyltransferase YLBP; YIBP protein, coenzyme A, structural GE PSI-2, protein structure initiative; HET: SUC COA; 3.20A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.81 E-value=8.7e-09 Score=95.23 Aligned_cols=108 Identities=14% Similarity=0.226 Sum_probs=75.3
Q ss_pred cccccccccccCHHHHHHHHHHHHHccccccCCHHHHHhccCeEEEEEECCeEEEEEEEeeecc---------CCceEEe
Q 007903 447 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFK---------EKCGEVA 517 (585)
Q Consensus 447 ~~~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i~~~~Va~~dg~IVG~~~l~~~~~---------~~~aeI~ 517 (585)
.+..||+++++|++.+.++... .+.. .....++++..+++++|++.+..... ...++|.
T Consensus 19 ~~~~iR~~~~~D~~~i~~l~~~----~~~~--------~~~~~~~~~~~~~~~~g~~~~~~~~~~i~G~~~~~~~~~~i~ 86 (163)
T 2pr1_A 19 EFKKFKEYGIQELSMLEELQDN----IIEN--------DSTSPFYGIYFGDKLVARMSLYQVNGKSNPYFDNRQDYLELW 86 (163)
T ss_dssp HHTTSSSCCHHHHHHHHHHHHC----GGGT--------TEEEEEEEEEETTEEEEEEEEEEECTTSSCCSGGGCCEEEEE
T ss_pred ceeeeEEcChhhHHHHHHHHHH----hhcc--------ccCCceEEEEeCCceeEEEEEEecCCeeeeEEecCCCEEEEE
Confidence 3467999999999999998432 1110 11234677788999999988864321 3468999
Q ss_pred eEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceeccccccc-ccCeeecCc
Q 007903 518 AIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYY-RLKFNCSSK 576 (585)
Q Consensus 518 ~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YY-rlGF~~~~~ 576 (585)
.++|+|+|||+|||++||++++ + .++.-. ... .+.+..|| ++||+..+.
T Consensus 87 ~l~V~p~~rg~GiG~~Ll~~~~----~----~g~~l~-~~~-~n~a~~fY~k~GF~~~~~ 136 (163)
T 2pr1_A 87 KLEVLPGYQNRGYGRALVEFAK----S----FKMPIR-TNP-RMKSAEFWNKMNFKTVKY 136 (163)
T ss_dssp EEEECTTSTTSSHHHHHHHHHH----T----TCSCEE-ECC-CGGGHHHHHHTTCEECCC
T ss_pred EEEECHHHcCCCHHHHHHHHHH----H----cCcEEE-Eec-CchHHHHHHHcCCEEeee
Confidence 9999999999999999999999 4 233211 111 12344555 799998765
|
| >2qml_A BH2621 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: MSE; 1.55A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=98.80 E-value=6.1e-09 Score=98.08 Aligned_cols=124 Identities=13% Similarity=-0.003 Sum_probs=81.5
Q ss_pred cccccccccCHHHHHHHHHHHHH-ccccccCCHHHHHhcc--------CeEEEEEECCeEEEEEEEeeec--------cC
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVE-SGALVRRTDEELLKAL--------DSFYVVEREGQIIACAALFPFF--------KE 511 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~-~~~~~~~~~e~l~~~i--------~~~~Va~~dg~IVG~~~l~~~~--------~~ 511 (585)
..||+++++|++.+.+++..... ..+..+.+.+.....+ ..+++++.+|++||++.+.... ..
T Consensus 22 ~~ir~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~~~ 101 (198)
T 2qml_A 22 LSFRHVTMDDVDMLHSWMHEEHVIPYWKLNIPLVDYKKHLQTFLNDDHQTLMVGAINGVPMSYWESYWVKEDIIANYYPF 101 (198)
T ss_dssp EEEEECCGGGHHHHHHHTTSTTTHHHHCCCCCHHHHHHHHHHHHTCTTEEEEEEEETTEEEEEEEEEEGGGSGGGGGSCC
T ss_pred EEEEECCHHHHHHHHHHHcCcchhhhccCCCCHHHHHHHHHHhhcCCCceEEEEEECCEEEEEEEEEecccccccccccC
Confidence 57999999999999998543211 1111111444333222 2567888999999999987432 12
Q ss_pred CceEEe-eEEEc-cCCcCCcHHHHHHHHHHhhhHHHHHH-cCCcccCcccee--c-ccccccccCeeecCc
Q 007903 512 KCGEVA-AIGVS-PECRGQGQGDKLLGLCIWPLLSETRY-DHISTNGFPFLR--G-RTHSYYRLKFNCSSK 576 (585)
Q Consensus 512 ~~aeI~-~L~V~-PeyRGkGIGk~LL~~~~~~a~~~A~~-~gi~~~g~~~~~--~-~a~~YYrlGF~~~~~ 576 (585)
..+++. .++|. |+|||+|+|++|++.++ +++.+ .++......... . ..+.|.++||+..+.
T Consensus 102 ~~~~~~~~~~v~~p~~rg~Gig~~ll~~~~----~~a~~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~~~ 168 (198)
T 2qml_A 102 EEHDQGIHLLIGPQEYLGQGLIYPLLLAIM----QQKFQEPDTNTIVAEPDRRNKKMIHVFKKCGFQPVKE 168 (198)
T ss_dssp CTTCEEEEEEECSGGGSSSSTHHHHHHHHH----HHHHTSTTCCEEEECCBTTCHHHHHHHHHTTCEEEEE
T ss_pred CCccEEEEEEEeCHHHcCCCHHHHHHHHHH----HHHHhCCCCCEEEEecCCCCHHHHHHHHHCCCEEEEE
Confidence 344454 48888 59999999999999999 88866 487764332222 2 333455899997754
|
| >2g0b_A FEEM; N-acyl transferase, environmental DNA, protein-product compl antibiotic synthase, transferase; HET: NLT; 3.00A {Uncultured bacterium} | Back alignment and structure |
|---|
Probab=98.79 E-value=1.4e-08 Score=98.28 Aligned_cols=124 Identities=11% Similarity=0.104 Sum_probs=88.7
Q ss_pred cccccccccC-HHHHHHHHHHHHH-cccccc-CCHHHHHhccCeEEEEEECCeEEEEEEEeeecc---------------
Q 007903 449 EGTRTAKVTD-LSGIKQIIQPLVE-SGALVR-RTDEELLKALDSFYVVEREGQIIACAALFPFFK--------------- 510 (585)
Q Consensus 449 ~~IR~at~~D-~~~I~~Li~~~~~-~~~~~~-~~~e~l~~~i~~~~Va~~dg~IVG~~~l~~~~~--------------- 510 (585)
..||.++.+| .+++.+|.+...- .++..+ ...+.+......++++..+|++|||+.+.+...
T Consensus 7 ~~ir~a~~~~~~~~i~~Lr~~~y~e~~~~~~~~~~~~~~~~~~~~~~a~~~g~ivG~~~l~~~~~~~lp~~~~~~~e~~~ 86 (198)
T 2g0b_A 7 KVARILVAPNERDAARRIVRTTYEAQGYAIDESFATFLEGPSATTFGLFNGEVLYGTISIINDGAQGLPMDSIYAVELAA 86 (198)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHTSTTEEEEEEEETTEEEEEEEEEECBTTBCTTHHHHHHHHHH
T ss_pred eeEEEeCCHHHHHHHHHHHHHHHHHhccCcccccchhhcCCCcEEEEEEECCEEEEEEEEEeCCCcCCchhhhchhhhhh
Confidence 4578887666 9999999765443 344322 111222222356788889999999999985321
Q ss_pred -----CCceEEeeEEEccCC--------cCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceeccccccc-ccCeeecCc
Q 007903 511 -----EKCGEVAAIGVSPEC--------RGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYY-RLKFNCSSK 576 (585)
Q Consensus 511 -----~~~aeI~~L~V~Pey--------RGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YY-rlGF~~~~~ 576 (585)
.+.+||.+|||+|+| ||+|+|+.||+.++ ++|++.|+..... ..+.+...|| ++||+..+.
T Consensus 87 ~~~~~~~~~EI~RLaV~~~~~~~~~~~~rg~gig~~L~~~a~----~~a~~~g~~~i~l-evn~ra~~FY~k~GF~~~g~ 161 (198)
T 2g0b_A 87 WRGEGKKLAEVVQFAMDHTLYEAVAGAKPSPFEAASLFTMVL----TYALETHIDYLCI-SINPKHDTFYSLLGFTQIGA 161 (198)
T ss_dssp HHHTTCCEEEEEEEEECTTSSCCCC----CGGGCHHHHHHHH----HHHHHTTCSEEEE-EECGGGHHHHHHTTCEEEEE
T ss_pred hhhcCCcEEEEEEEEEchHHhhcccccccCChHHHHHHHHHH----HHHHHcCCCEEEE-EeCHHHHHHHHHCCCEEeeC
Confidence 148899999999999 99999999999999 9999999876543 3445555666 699997754
Q ss_pred c
Q 007903 577 S 577 (585)
Q Consensus 577 ~ 577 (585)
.
T Consensus 162 ~ 162 (198)
T 2g0b_A 162 L 162 (198)
T ss_dssp E
T ss_pred C
Confidence 3
|
| >1p0h_A Hypothetical protein RV0819; GNAT fold, acetyltransferase, coenzyme A complex, MSHD, TRAN; HET: COA ACO; 1.60A {Mycobacterium tuberculosis} SCOP: d.108.1.1 PDB: 1ozp_A* 2c27_A* | Back alignment and structure |
|---|
Probab=98.75 E-value=2e-08 Score=102.11 Aligned_cols=124 Identities=19% Similarity=0.122 Sum_probs=86.0
Q ss_pred ccccccccc-CHHHHHHHHHHHHHcc-ccccCCHHHHHhcc-------CeEEEEE------ECCeEEEEEEEeeecc-CC
Q 007903 449 EGTRTAKVT-DLSGIKQIIQPLVESG-ALVRRTDEELLKAL-------DSFYVVE------REGQIIACAALFPFFK-EK 512 (585)
Q Consensus 449 ~~IR~at~~-D~~~I~~Li~~~~~~~-~~~~~~~e~l~~~i-------~~~~Va~------~dg~IVG~~~l~~~~~-~~ 512 (585)
..||+++++ |.+.+.++........ ...+|+.+.+...+ ..++++. .+|++||++.+..... .+
T Consensus 155 ~~ir~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~g~~vG~~~~~~~~~~~~ 234 (318)
T 1p0h_A 155 VVIRTYAGTSDDAELLRVNNAAFAGHPEQGGWTAVQLAERRGEAWFDPDGLILAFGDSPRERPGRLLGFHWTKVHPDHPG 234 (318)
T ss_dssp EEEEECCSGGGHHHHHHHHHHHTTTCTTTSSCCHHHHHHHHTSTTCCGGGEEEEEEC------CCEEEEEEEECCTTSTT
T ss_pred eEEEecCcccchHHHHHHHHHHhccCCCCCCcCHHHHHHHhhCcccCcCceEEEEeccccCCCCcEEEEEEeeccCCCCc
Confidence 579999999 9999999866543321 12346666655433 3567777 7899999998874322 24
Q ss_pred ceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCC----------cccCcccee--cccc-cccccCeeecCc
Q 007903 513 CGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHI----------STNGFPFLR--GRTH-SYYRLKFNCSSK 576 (585)
Q Consensus 513 ~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi----------~~~g~~~~~--~~a~-~YYrlGF~~~~~ 576 (585)
.++|..++|+|+|||+|+|++|+.+++ +++++.|+ ....+.... ..+. .|.++||+..+.
T Consensus 235 ~~~i~~~~V~p~~rg~Glg~~ll~~~~----~~~~~~g~~~~~~~~~~~~~i~l~v~~~N~~a~~~y~~~GF~~~~~ 307 (318)
T 1p0h_A 235 LGEVYVLGVDPAAQRRGLGQMLTSIGI----VSLARRLGGRKTLDPAVEPAVLLYVESDNVAAVRTYQSLGFTTYSV 307 (318)
T ss_dssp EEEEEEEEECGGGCSSSHHHHHHHHHH----HHHHHHC---------CCCEEEEEEETTCHHHHHHHHHTTCEEEEE
T ss_pred eEEEEEEEECHHhccCCHHHHHHHHHH----HHHHHcccccccccccccceEEEEecCCCHHHHHHHHhcCCEEEeE
Confidence 799999999999999999999999999 88887887 543222211 1233 455799998654
|
| >2q04_A Acetoin utilization protein; ZP_00540088.1, structural genom joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 2.33A {Exiguobacterium sibiricum} | Back alignment and structure |
|---|
Probab=98.75 E-value=4.6e-09 Score=102.66 Aligned_cols=85 Identities=19% Similarity=0.201 Sum_probs=60.8
Q ss_pred CeEEEEEECCeEEEEEEEeeecc---------CCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCC-------
Q 007903 488 DSFYVVEREGQIIACAALFPFFK---------EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHI------- 551 (585)
Q Consensus 488 ~~~~Va~~dg~IVG~~~l~~~~~---------~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi------- 551 (585)
..++|++.||++|||+.+.+... ...++|..|||+|+|||+|||++||++++ +.++..++
T Consensus 61 ~~~~vA~~dg~iVG~~~l~~~~~~~~~~~~~~~~~~el~~i~V~p~~RG~GIG~~Ll~~~~----~~a~~~~~i~l~~~~ 136 (211)
T 2q04_A 61 GRIIIARQGNDIIGYVTFLYPDPYETWSEGNNPYILELGAIEVAARFRGQQIGKKLLEVSM----LDPAMEHYLILTTEY 136 (211)
T ss_dssp CEEEEEEETTEEEEEEEEECCCTTSGGGCSSCTTEEEEEEEEECGGGTTSCHHHHHHHHHH----TSGGGGGSEEEEEEC
T ss_pred cEEEEEEECCEEEEEEEEEeCCcccccccccccceEEEeEEEECHHHcCCCHHHHHHHHHH----HHHHHcCCceeeeeh
Confidence 57889999999999999874311 13578888999999999999999999999 55555443
Q ss_pred ------cccCcc--ceeccccc-ccccCeeecCc
Q 007903 552 ------STNGFP--FLRGRTHS-YYRLKFNCSSK 576 (585)
Q Consensus 552 ------~~~g~~--~~~~~a~~-YYrlGF~~~~~ 576 (585)
....+. ..+..+.. |.++||+..+.
T Consensus 137 ~~~~~~~~~~L~V~~~N~~A~~lY~k~GF~~~g~ 170 (211)
T 2q04_A 137 YWHWDLKGSGLSVWDYRKIMEKMMNHGGLVFFPT 170 (211)
T ss_dssp GGGCCHHHHCCCHHHHHHHHHHHHHHTTCEEECC
T ss_pred hhhcCccccccchhhhhHHHHHHHHHCCCEEecc
Confidence 222221 11234444 55799998865
|
| >1r57_A Conserved hypothetical protein; GCN5, N-acetyltransferase, structural genomics, PSI, protein structure initiative; NMR {Staphylococcus aureus} SCOP: d.108.1.1 PDB: 2h5m_A* | Back alignment and structure |
|---|
Probab=98.73 E-value=9.1e-09 Score=87.87 Aligned_cols=79 Identities=20% Similarity=0.264 Sum_probs=60.6
Q ss_pred CeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceeccccccc
Q 007903 488 DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYY 567 (585)
Q Consensus 488 ~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YY 567 (585)
..+++++.++++||++.+.+ ..++..+|..++|+|+|||+|+|++||+.++ +++++.++...... ..+..||
T Consensus 11 ~~~~~~~~~~~ivG~~~~~~-~~~~~~~i~~~~V~p~~rg~GiG~~Ll~~~~----~~a~~~g~~~i~l~---~~~~nfy 82 (102)
T 1r57_A 11 NKFYIGDDENNALAEITYRF-VDNNEINIDHTGVSDELGGQGVGKKLLKAVV----EHARENNLKIIASC---SFAKHML 82 (102)
T ss_dssp TEEEEESSSTTEEEEEEEEE-SSSSEEEEEEEEECCSSSTTCTHHHHHHHHH----HHHHHHTCEEEESS---HHHHHHH
T ss_pred CEEEEEECCCeEEEEEEEEe-CCCCEEEEEEEEECHHHCCCCHHHHHHHHHH----HHHHHcCCCEEEcC---HHHHHHH
Confidence 44556557899999999874 3346789999999999999999999999999 88888888764322 2333444
Q ss_pred -ccC-eeec
Q 007903 568 -RLK-FNCS 574 (585)
Q Consensus 568 -rlG-F~~~ 574 (585)
+.| |.+.
T Consensus 83 ~k~~~~~~~ 91 (102)
T 1r57_A 83 EKEDSYQDV 91 (102)
T ss_dssp HHCGGGTTT
T ss_pred HhChHHHHH
Confidence 687 8765
|
| >1yk3_A Hypothetical protein RV1347C/MT1389; acyltransferase, GCN5-related fold, structural genomics, PSI, protein structure initiative; HET: BOG; 2.20A {Mycobacterium tuberculosis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=98.72 E-value=2e-08 Score=97.14 Aligned_cols=124 Identities=11% Similarity=-0.019 Sum_probs=81.2
Q ss_pred cccccccccCHHHHHHHHHHHH-HccccccCCHHHHHhcc--------CeEEEEEECCeEEEEEEEeeeccC--------
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLV-ESGALVRRTDEELLKAL--------DSFYVVEREGQIIACAALFPFFKE-------- 511 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~-~~~~~~~~~~e~l~~~i--------~~~~Va~~dg~IVG~~~l~~~~~~-------- 511 (585)
..||+++++|++.+.++++... ...+..+++.+.+...+ ..+++++.+|++||++.+.....+
T Consensus 43 l~lR~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~iG~~~l~~~~~~~~~~~~~~ 122 (210)
T 1yk3_A 43 YGLRVAQLTDAEMLAEWMNRPHLAAAWEYDWPASRWRQHLNAQLEGTYSLPLIGSWHGTDGGYLELYWAAKDLISHYYDA 122 (210)
T ss_dssp EEEEECCGGGHHHHHHHHTSHHHHHHHCCCCCHHHHHHHHHHHHTSSSEEEEEEEETTEEEEEEEEEEGGGBGGGGSSCC
T ss_pred EEEEECCHHHHHHHHHHHcChHHHHHhCCCCCHHHHHHHHHHhhcCCcceEEEEEECCEEEEEEEEEcccccccccccCC
Confidence 5799999999999999865432 11122344555433322 246778889999999988632111
Q ss_pred CceEEe-eEEEc-cCCcCCcHHHHHHHHHHhhhHHHHHH--cCCcccCccce--ecc-cccccccCeeecCc
Q 007903 512 KCGEVA-AIGVS-PECRGQGQGDKLLGLCIWPLLSETRY--DHISTNGFPFL--RGR-THSYYRLKFNCSSK 576 (585)
Q Consensus 512 ~~aeI~-~L~V~-PeyRGkGIGk~LL~~~~~~a~~~A~~--~gi~~~g~~~~--~~~-a~~YYrlGF~~~~~ 576 (585)
...++. .++|. |+|||+|||++|++.++ +++.+ .++........ +.+ .+.|.|+||+..+.
T Consensus 123 ~~~~~g~~~~i~~p~~rGkGiG~~ll~~~~----~~a~~~~~g~~~I~l~v~~~N~~A~~lyek~GF~~~g~ 190 (210)
T 1yk3_A 123 DPYDLGLHAAIADLSKVNRGFGPLLLPRIV----ASVFANEPRCRRIMFDPDHRNTATRRLCEWAGCKFLGE 190 (210)
T ss_dssp CTTCEEEEEEESCHHHHTTTHHHHHHHHHH----HHHHHHCTTCCEEEECCBTTCHHHHHHHHHHTCEEEEE
T ss_pred CCCceEEEEEEEChhhcCCChHHHHHHHHH----HHHHhcCCCCCEEEEecCccCHHHHHHHHHcCCEEeEE
Confidence 111221 45665 99999999999999999 88875 68876533221 223 34456899997653
|
| >2vzy_A RV0802C; transferase, GCN5-related N-acetyltransferase, succinyltransferase; HET: FLC; 2.00A {Mycobacterium tuberculosis} PDB: 2vzz_A* | Back alignment and structure |
|---|
Probab=98.72 E-value=2.4e-08 Score=95.76 Aligned_cols=123 Identities=10% Similarity=-0.072 Sum_probs=80.6
Q ss_pred cccccccccCHHHHHHHHHHH----HHccccccCC-------H-HHHHhcc-----------CeEEEEEECCeEEEEEEE
Q 007903 449 EGTRTAKVTDLSGIKQIIQPL----VESGALVRRT-------D-EELLKAL-----------DSFYVVEREGQIIACAAL 505 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~----~~~~~~~~~~-------~-e~l~~~i-----------~~~~Va~~dg~IVG~~~l 505 (585)
..||+++++|++.+.+++... ....+..+|. . +.+...+ ..+++++.+|++||++.+
T Consensus 17 l~lR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~~~ 96 (218)
T 2vzy_A 17 LQLQLPTEELCDQLIDTILEGVHDPDRMPFSVPWTRASREDLPFNTLSHLWQQLAGFKRDDWSLPLAVLVDGRAVGVQAL 96 (218)
T ss_dssp EEEECCCHHHHHHHHHHHHC-------------------CCHHHHHHHHHHHHHHTCBTTEEEEEEEEEETTEEEEEEEE
T ss_pred EEEecCCHHHHHHHHHHHhhcccCccccccccCcCCcCchHHHHHHHHHHHHhhcccCcCCceEEEEEEECCEEEEEEEE
Confidence 579999999999999997521 1111111111 0 1111110 145777889999999999
Q ss_pred eeec--cCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHH-cCCcccCcccee---cccccccccCeeecCc
Q 007903 506 FPFF--KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRY-DHISTNGFPFLR---GRTHSYYRLKFNCSSK 576 (585)
Q Consensus 506 ~~~~--~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~-~gi~~~g~~~~~---~~a~~YYrlGF~~~~~ 576 (585)
.... ....+++ .++|+|+|||+|||++|++.++ +++.+ .++......... ...+.|.++||+..+.
T Consensus 97 ~~~~~~~~~~~ei-g~~v~~~~rgkGig~~ll~~l~----~~a~~~~g~~~i~~~v~~~N~~a~~~y~k~GF~~~g~ 168 (218)
T 2vzy_A 97 SSKDFPITRQVDS-GSWLGLRYQGHGYGTEMRAAVL----YFAFAELEAQVATSRSFVDNPASIAVSRRNGYRDNGL 168 (218)
T ss_dssp EEESHHHHCEEEE-EEEECGGGTTSSHHHHHHHHHH----HHHHHTSCCSEEEEEEETTCHHHHHHHHHTTCEEEEE
T ss_pred eccccCCCCeEEE-EEEECHHHcCCCHHHHHHHHHH----HHHHhhCCceEEEEEeccCCHHHHHHHHHCCCEEeee
Confidence 7543 2356777 4799999999999999999999 88877 688764332221 2333466899997653
|
| >4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A* | Back alignment and structure |
|---|
Probab=98.71 E-value=8.8e-09 Score=106.27 Aligned_cols=121 Identities=15% Similarity=0.040 Sum_probs=81.6
Q ss_pred cccccccccCHHHHHHHHHHHHH----cccc-c-cCCHHHHHhc------cCeEEEEEECCeEEEEEEEeeecc-CCceE
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVE----SGAL-V-RRTDEELLKA------LDSFYVVEREGQIIACAALFPFFK-EKCGE 515 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~----~~~~-~-~~~~e~l~~~------i~~~~Va~~dg~IVG~~~l~~~~~-~~~ae 515 (585)
..||+++++|++.+.+++..... ..+. . ....+.+... -...++++.++++||++.+..... ...++
T Consensus 156 l~iR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~vG~~~~~~~~~~~~~~e 235 (333)
T 4ava_A 156 LMLRPVLPGDRERTVHGHIQFSGETLYRRFMSARVPSPALMHYLSEVDYVDHFVWVVTDGSDPVADARFVRDETDPTVAE 235 (333)
T ss_dssp EEEEECCTTCGGGTCCCSSCCCHHHHHGGGCC-----HHHHHHHHHHCCSSEEEEEEEETTEEEEEEEEEECSSCTTEEE
T ss_pred EEecCCChhHHHHHHHHHHhCChhhHHHHHcCCCCCCHHHHHHHhccCccccEEEEEEeCCCeEEEEEEEecCCCCCeEE
Confidence 57999999999998877542111 1111 1 1122222211 135678899999999999885433 34566
Q ss_pred EeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee---cccccccccCeeec
Q 007903 516 VAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR---GRTHSYYRLKFNCS 574 (585)
Q Consensus 516 I~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~---~~a~~YYrlGF~~~ 574 (585)
+ .++|+|+|||+|||++|+++++ +++++.|+......... ...+.|.|+||+..
T Consensus 236 ~-~~~v~~~~rg~Gig~~ll~~~~----~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~ 292 (333)
T 4ava_A 236 I-AFTVADAYQGRGIGSFLIGALS----VAARVDGVERFAARMLSDNVPMRTIMDRYGAVWQ 292 (333)
T ss_dssp E-EEEECGGGTTSSHHHHHHHHHH----HHHHHTTCCEEEEEEETTCHHHHHHHHTTTCCCE
T ss_pred E-EEEECHHhcCCCHHHHHHHHHH----HHHHHCCCcEEEEEECCCCHHHHHHHHHcCCcee
Confidence 6 6999999999999999999999 88888898775433222 22334568999965
|
| >1p0h_A Hypothetical protein RV0819; GNAT fold, acetyltransferase, coenzyme A complex, MSHD, TRAN; HET: COA ACO; 1.60A {Mycobacterium tuberculosis} SCOP: d.108.1.1 PDB: 1ozp_A* 2c27_A* | Back alignment and structure |
|---|
Probab=98.69 E-value=3e-08 Score=100.80 Aligned_cols=120 Identities=14% Similarity=0.166 Sum_probs=76.4
Q ss_pred ccccccccCHHHHHHHHHHHHHccccccCCHHHHHhcc----CeEEEEEEC---CeEEEEEEEeeeccCCceEEeeEEEc
Q 007903 450 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVERE---GQIIACAALFPFFKEKCGEVAAIGVS 522 (585)
Q Consensus 450 ~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i----~~~~Va~~d---g~IVG~~~l~~~~~~~~aeI~~L~V~ 522 (585)
.+|+++++|++++.+|+..........+...+.+ ..+ ..+++++.+ |++||++.+.... .....+..++|+
T Consensus 9 ~~R~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~g~~vG~~~~~~~~-~~~~~~~~l~v~ 86 (318)
T 1p0h_A 9 WRSALTADEQRSVRALVTATTAVDGVAPVGEQVL-RELGQQRTEHLLVAGSRPGGPIIGYLNLSPPR-GAGGAMAELVVH 86 (318)
T ss_dssp CBSCCCHHHHHHHHHHHHHHHHHHSSCSSCHHHH-HHTTSSSSEEEEEECSSTTCCEEEEEEEECC----CCCEEEEEEC
T ss_pred eecCCCHHHHHHHHHHHHHHHHhcCCCchhHHHH-HHhhcCCCcEEEEEeCCCCCcEEEEEEEECCC-CCCcEEEEEEEC
Confidence 3579999999999999876554322223333322 222 467888888 9999999998432 222234578999
Q ss_pred cCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceecccc-cccccCeeecCcc
Q 007903 523 PECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTH-SYYRLKFNCSSKS 577 (585)
Q Consensus 523 PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~-~YYrlGF~~~~~~ 577 (585)
|+|||+|+|++|+++++ +++. ..+..... .....+. .|.++||......
T Consensus 87 p~~rg~Gig~~Ll~~~~----~~~~-~~~~~~~~-~~~~~a~~~y~~~Gf~~~~~~ 136 (318)
T 1p0h_A 87 PQSRRRGIGTAMARAAL----AKTA-GRNQFWAH-GTLDPARATASALGLVGVREL 136 (318)
T ss_dssp GGGCSSSHHHHHHHHHH----HHTT-TCCEEEEG-GGCHHHHHHHHHTTCEEEEEE
T ss_pred ccccCCCHHHHHHHHHH----Hhhc-CEEEEEEc-CCCHHHHHHHHHCCCeeEeEE
Confidence 99999999999999999 5441 11111101 1112233 3447999877643
|
| >3tcv_A GCN5-related N-acetyltransferase; GRAM negative coccobacillus, brucellosis, acyl CO-A, arylami transferase; 1.75A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} | Back alignment and structure |
|---|
Probab=98.68 E-value=7.4e-08 Score=95.50 Aligned_cols=124 Identities=13% Similarity=0.019 Sum_probs=85.8
Q ss_pred ccccccccc-cCHHHHHHHHH---HHHHcccc---ccCCHHHHHhcc--------CeEEEEE--ECCeEEEEEEEeeec-
Q 007903 448 YEGTRTAKV-TDLSGIKQIIQ---PLVESGAL---VRRTDEELLKAL--------DSFYVVE--REGQIIACAALFPFF- 509 (585)
Q Consensus 448 ~~~IR~at~-~D~~~I~~Li~---~~~~~~~~---~~~~~e~l~~~i--------~~~~Va~--~dg~IVG~~~l~~~~- 509 (585)
...||++++ +|++.+.+++. ......+. ...+.+.....+ ..+|++. .+|++||++.+....
T Consensus 43 ~l~LR~~~~e~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~i~~~~~g~~IG~~~l~~~~~ 122 (246)
T 3tcv_A 43 YVRLEPLNAQKHGDELFAASSVEDAEQRFTWLFETPPATRAEFEPWLDKASKSDDPLFFAVIDKASGKVAGRQALMRIDP 122 (246)
T ss_dssp SEEEEECCHHHHHHHHHHHHTSTTHHHHHTTSSSCCCSSHHHHHHHHHHHHHCSSSEEEEEEETTTCSEEEEEEEEEEET
T ss_pred cEEEEECCchhhHHHHHHHhcCCCCHHHHhccCCCCCCCHHHHHHHHHHHhcCCCceEEEEEECCCCCEEEEEEEeeccc
Confidence 367999999 79999999975 22222221 123444443332 3445554 389999999986432
Q ss_pred cCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHH-cCCcccCcccee---cccccccccCeeecC
Q 007903 510 KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRY-DHISTNGFPFLR---GRTHSYYRLKFNCSS 575 (585)
Q Consensus 510 ~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~-~gi~~~g~~~~~---~~a~~YYrlGF~~~~ 575 (585)
....++|..++|+|+|||+|||++++..++ ++|.+ .++......... .....|.++||+..+
T Consensus 123 ~~~~~eig~~~v~p~~rgkGig~~ll~~ll----~~a~~~~g~~~i~l~v~~~N~~s~~lyek~GF~~~G 188 (246)
T 3tcv_A 123 ANGVIEIGSIYWGPLISRRPAATEAQFLFM----QYVFDVLGYRRYEWECHNENGPSRRAAERFGFRFEG 188 (246)
T ss_dssp TTTEEEEEEEEECTTTTTSHHHHHHHHHHH----HHHHHTSCCSEEEEEEETTCHHHHHHHHHHTCEEEE
T ss_pred ccCEEEEEEEEECHHHcCCCHHHHHHHHHH----HHHHHhcCcEEEEEEccCCCHHHHHHHHHCCCEEEE
Confidence 356889998889999999999999999999 88776 588775433222 233346689999764
|
| >3g3s_A GCN5-related N-acetyltransferase; ZP_00874857.1, acetyltransferase (GNAT) family, structural joint center for structural genomics, JCSG; HET: MSE; 1.80A {Streptococcus suis} | Back alignment and structure |
|---|
Probab=98.62 E-value=4.2e-08 Score=98.29 Aligned_cols=118 Identities=10% Similarity=-0.008 Sum_probs=78.6
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccC-CHHHHHhccCeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCCcC
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRR-TDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRG 527 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~-~~e~l~~~i~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyRG 527 (585)
..||+.+++|++.+.+.. ..+.+...| +.+.+... ...+++..+|++||++.+... .....++ .++|+|+|||
T Consensus 124 ~~ir~~d~~d~~~~~~~~---w~~~~~~~~~~~~~~~~~-g~~~v~~~~g~iVG~~~~~~~-~~~~~ei-~i~v~p~~rG 197 (249)
T 3g3s_A 124 FDMKLIDRNLYETCLVEE---WSRDLVGNYIDVEQFLDL-GLGCVILHKGQVVSGASSYAS-YSAGIEI-EVDTREDYRG 197 (249)
T ss_dssp SEEEECCHHHHHHHHHST---TTGGGTTTSSSHHHHHHH-CCEEEEEETTEEEEEEEEEEE-ETTEEEE-EEEECGGGTT
T ss_pred cEEEECCHHHHHHHHhcc---CHHHHHHhccCHHHHHhC-CcEEEEEECCEEEEEEEEEEe-cCCeEEE-EEEEChHhcC
Confidence 578999999988876331 111111112 23333322 456677889999999988743 3344555 7999999999
Q ss_pred CcHHHHHHHHHHhhhHHHHHHcCCcccCccceecccccccccCeeecCc
Q 007903 528 QGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYYRLKFNCSSK 576 (585)
Q Consensus 528 kGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YYrlGF~~~~~ 576 (585)
+|+|++||++++ +++++.++...-........+.|.|+||+..+.
T Consensus 198 kGlg~~Ll~~li----~~a~~~g~~~~~~~~N~~a~~lYeKlGF~~~g~ 242 (249)
T 3g3s_A 198 LGLAKACAAQLI----LACLDRGLYPSWDAHTLTSLKLAEKLGYELDKA 242 (249)
T ss_dssp SSHHHHHHHHHH----HHHHHTTCEEECEESSHHHHHHHHHHTCCEEEE
T ss_pred CCHHHHHHHHHH----HHHHHCCCeEEEeCCCHHHHHHHHHCCCEEeee
Confidence 999999999999 888888886432221122334566899997653
|
| >2wpx_A ORF14; transferase, acetyl transferase, antibiotic biosynthesis; HET: ACO; 2.31A {Streptomyces clavuligerus} PDB: 2wpw_A* | Back alignment and structure |
|---|
Probab=98.47 E-value=1.3e-07 Score=96.61 Aligned_cols=84 Identities=11% Similarity=-0.033 Sum_probs=63.7
Q ss_pred eEEEEEE--CCeEEEEEEEeeec-cCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHH--cCCcccCccceec--
Q 007903 489 SFYVVER--EGQIIACAALFPFF-KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRY--DHISTNGFPFLRG-- 561 (585)
Q Consensus 489 ~~~Va~~--dg~IVG~~~l~~~~-~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~--~gi~~~g~~~~~~-- 561 (585)
.++++.. +|++|||+.+.... ....++|..++|+|+|||+|+|++|+.+++ +++++ .|+....+.....
T Consensus 236 ~~~~~~~~~~g~~vG~~~~~~~~~~~~~~~i~~~~V~p~~rg~G~g~~L~~~~~----~~~~~~~~g~~~~~l~v~~~N~ 311 (339)
T 2wpx_A 236 YHTGAVHDATGALAGYTSVSKTTGNPAYALQGMTVVHREHRGHALGTLLKLANL----EYVLRHEPEVRLVETANAEDNH 311 (339)
T ss_dssp EEEEEEETTTTEEEEEEEEEECSSCTTEEEEEEEEECGGGTTSCHHHHHHHHHH----HHHHHHCTTCCEEEEEEETTCH
T ss_pred EEEEEEeCCCCcEEEEEEEEccCCCCceEEEeeEEECHHhcCccHHHHHHHHHH----HHHHHhCCCceEEEEecccccH
Confidence 3566666 89999999987432 345789999999999999999999999999 88888 8887653332222
Q ss_pred ccc-cccccCeeecCc
Q 007903 562 RTH-SYYRLKFNCSSK 576 (585)
Q Consensus 562 ~a~-~YYrlGF~~~~~ 576 (585)
.+. .|.++||+..+.
T Consensus 312 ~a~~ly~~~Gf~~~~~ 327 (339)
T 2wpx_A 312 PMIAVNAALGFEPYDR 327 (339)
T ss_dssp HHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHcCCEEecc
Confidence 233 455799987653
|
| >1sqh_A Hypothetical protein CG14615-PA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Drosophila melanogaster} SCOP: d.108.1.5 | Back alignment and structure |
|---|
Probab=98.41 E-value=4.1e-07 Score=93.90 Aligned_cols=114 Identities=13% Similarity=0.108 Sum_probs=77.1
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHHhcc---CeEEEEE-ECCeEEEEEEEeeeccCCceEEeeEEEccC
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVVE-REGQIIACAALFPFFKEKCGEVAAIGVSPE 524 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i---~~~~Va~-~dg~IVG~~~l~~~~~~~~aeI~~L~V~Pe 524 (585)
..||+++++|++.+.+++.. ..+.+.+.+...+ ..+.++. .+|++||++... ..++|..++|+|+
T Consensus 174 l~lR~l~~~D~~~i~~~~~~------~~~~~~~~i~~~i~~~~~~~i~~~~~g~~VG~~~~~-----~~~~i~~l~V~p~ 242 (312)
T 1sqh_A 174 FEIRRLRAEDAAMVHDSWPN------KGEGSLTYLQALVRFNKSLGICRSDTGELIAWIFQN-----DFSGLGMLQVLPK 242 (312)
T ss_dssp EEEECCCGGGHHHHHHTCTT------CSSSCHHHHHHHHHHSCEEEEEETTTCCEEEEEEEC-----TTSSEEEEEECGG
T ss_pred eEEEECCHHHHHHHHHHhCc------CCcchHHHHHHHHhcCCcEEEEEecCCCEEEEEEEc-----CCceEEEEEECHH
Confidence 47999999999999887421 1122344443322 3344444 579999998754 2457889999999
Q ss_pred CcCCcHHHHHHHHHHhhhHHHHH-HcCCcccCccce-e-cccccccccCeeecCcc
Q 007903 525 CRGQGQGDKLLGLCIWPLLSETR-YDHISTNGFPFL-R-GRTHSYYRLKFNCSSKS 577 (585)
Q Consensus 525 yRGkGIGk~LL~~~~~~a~~~A~-~~gi~~~g~~~~-~-~~a~~YYrlGF~~~~~~ 577 (585)
|||+|+|++|+++++ +++. +.|+........ + .+...|.++||+..+..
T Consensus 243 ~rgkGiG~~ll~~l~----~~~~~~~g~~i~l~V~~~N~~A~~lyeklGF~~~g~~ 294 (312)
T 1sqh_A 243 AERRGLGGLLAAAMS----REIARGEEITLTAWIVATNWRSEALLKRIGYQKDLVN 294 (312)
T ss_dssp GCSSSHHHHHHHHHH----HHHHHHSCSCEEEEEETTCHHHHHHHHHHTCEEEEEE
T ss_pred HcCCCHHHHHHHHHH----HHHHHhCCCeEEEEEeCCCHHHHHHHHHCCCEEeeeE
Confidence 999999999999999 7777 788762211111 1 23344668999977543
|
| >2ft0_A TDP-fucosamine acetyltransferase; GNAT fold acetyltransferase, structural genomics, montreal-K bacterial structural genomics initiative, BSGI; HET: ACO; 1.66A {Escherichia coli} PDB: 2fs5_A* | Back alignment and structure |
|---|
Probab=98.28 E-value=1.4e-06 Score=85.25 Aligned_cols=120 Identities=16% Similarity=0.218 Sum_probs=81.9
Q ss_pred cccccccccCHHHHHHHHHHHHHcc-ccccC-CHH-------H-HHh-----ccCeEEEEE-ECCeEEEEEEEeeeccCC
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESG-ALVRR-TDE-------E-LLK-----ALDSFYVVE-REGQIIACAALFPFFKEK 512 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~-~~~~~-~~e-------~-l~~-----~i~~~~Va~-~dg~IVG~~~l~~~~~~~ 512 (585)
..||+++++|++.+.++........ +..++ +.+ . +.. .-..+++++ .+|++||++.+.+. ..
T Consensus 94 ~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~g~ivG~~~l~~~-~~- 171 (235)
T 2ft0_A 94 SGAVVAQETDIPALRQLASAAFAQSRFRAPWYAPDASGRFYAQWIENAVRGTFDHQCLILRAASGDIRGYVSLREL-NA- 171 (235)
T ss_dssp CCCEECCGGGHHHHHHHHHHHTTTSTTCTTTSCTTHHHHHHHHHHHHHHTCCTTEEEEEEECTTSCEEEEEEEEEC-SS-
T ss_pred ceEEeCCHHhHHHHHHHHHhhHhhccCCCCCCCHHHHHHHHHHHHHHhhccCCCceEEEEECCCCcEEEEEEEEec-CC-
Confidence 4699999999999999976654433 21111 111 1 111 114578888 89999999999852 11
Q ss_pred ceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccce--e-cccccccccCeeecCcccc
Q 007903 513 CGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFL--R-GRTHSYYRLKFNCSSKSFH 579 (585)
Q Consensus 513 ~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~--~-~~a~~YYrlGF~~~~~~~~ 579 (585)
....++|.| |+|||++|+++++ +++++.|+....+... + .....|.++||+..+..+.
T Consensus 172 --~~~~i~v~~---g~GiG~~Ll~~~~----~~a~~~g~~~i~l~v~~~N~~A~~lY~k~GF~~~~~~~~ 232 (235)
T 2ft0_A 172 --TDARIGLLA---GRGAGAELMQTAL----NWAYARGKTTLRVATQMGNTAALKRYIQSGANVESTAYW 232 (235)
T ss_dssp --SEEEEEEEE---CTTCHHHHHHHHH----HHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEEEEEEEE
T ss_pred --CceEEEEEc---CCCHHHHHHHHHH----HHHHHcCCCEEEEEEecCCHHHHHHHHHCCCEEeEEEEE
Confidence 236789999 9999999999999 8888888876543322 1 2333455899998765443
|
| >2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A* | Back alignment and structure |
|---|
Probab=98.28 E-value=7.7e-07 Score=89.49 Aligned_cols=120 Identities=6% Similarity=-0.051 Sum_probs=79.0
Q ss_pred ccccccccc-CHHHHHHHHHHHHHcccc---ccCCHHHHHh--------ccCeEEEEE--ECCeEEEEEEEeeeccCCce
Q 007903 449 EGTRTAKVT-DLSGIKQIIQPLVESGAL---VRRTDEELLK--------ALDSFYVVE--REGQIIACAALFPFFKEKCG 514 (585)
Q Consensus 449 ~~IR~at~~-D~~~I~~Li~~~~~~~~~---~~~~~e~l~~--------~i~~~~Va~--~dg~IVG~~~l~~~~~~~~a 514 (585)
..||+++++ |++.+.+++.......+. .....+.+.. .-...+++. .+|++ |++.+.... . .+
T Consensus 17 l~lR~~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~~-G~~~~~~~~-~-~~ 93 (301)
T 2zw5_A 17 LELTPLDPAADARHLHHAYGDEEVMRWWTRPACADPAETERYLTSCAAAPGARLWTIRAPDGTVP-GMAGLLGGT-D-VP 93 (301)
T ss_dssp CEEEECCHHHHHHHHHHHHTCHHHHTTSSSCCCSSHHHHHHHHHHHHHSTTCEEEECCBTTTBCC-EEEEEESSC-S-SC
T ss_pred EEEEeCchhcCHHHHHHHhcCchhhhhcCCChHHHHHHHHHHHHHhhccCCceEEEEEECCCCCe-EEEEEecCC-C-eE
Confidence 579999999 999999997543322221 1112222221 112334433 37899 999987432 2 77
Q ss_pred EEeeEEEccCCcCCcHHHHHHHHHHhhhHHHH-HHcCCcccCcccee---cccccccccCeeecCc
Q 007903 515 EVAAIGVSPECRGQGQGDKLLGLCIWPLLSET-RYDHISTNGFPFLR---GRTHSYYRLKFNCSSK 576 (585)
Q Consensus 515 eI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A-~~~gi~~~g~~~~~---~~a~~YYrlGF~~~~~ 576 (585)
+|. ++|+|+|||+|||++|++.++ +++ +..++......... ...+.|.|+||+..+.
T Consensus 94 ~ig-~~v~~~~~g~G~g~~l~~~l~----~~a~~~~g~~~i~~~v~~~N~~s~~ly~k~GF~~~g~ 154 (301)
T 2zw5_A 94 GLT-WLLRRDSWGHGYATEAAAAVV----GHALEDGGLDRVEAWIEAGNRRSLAVAARVGLTERAR 154 (301)
T ss_dssp EEE-EEECTTSTTTTHHHHHHHHHH----HHHHTTTCCSEEEEEEESSCHHHHHHHHHTTCEEEEE
T ss_pred EEE-EEECHhHcCCCHHHHHHHHHH----HHHHhcCCccEEEEEeCCCCHHHHHHHHHcCCcCcce
Confidence 885 899999999999999999999 888 44588765333221 2333466899997754
|
| >2zpa_A Uncharacterized protein YPFI; RNA modification enzyme, RNA helicase, acetyltransferase, GCN5 acetyltransferase; HET: ACO ADP; 2.35A {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=98.21 E-value=1.2e-06 Score=98.81 Aligned_cols=108 Identities=18% Similarity=0.188 Sum_probs=69.9
Q ss_pred HHHHHHHHHHHccccccCCHHHHHhcc----CeEEEEEECCeEEEEEEEeeec---------------------------
Q 007903 461 GIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFF--------------------------- 509 (585)
Q Consensus 461 ~I~~Li~~~~~~~~~~~~~~e~l~~~i----~~~~Va~~dg~IVG~~~l~~~~--------------------------- 509 (585)
.+.+++.-+...++. .+++++...+ ..++|++.+|++||++.+....
T Consensus 365 ~L~~~~~Ll~~aHYr--~sp~dL~~llD~p~~~l~va~~~g~IVG~i~v~~eG~l~~~~~~~~~~g~rRp~G~lip~~l~ 442 (671)
T 2zpa_A 365 TPLKVYQLLSGAHYR--TSPLDLRRMMDAPGQHFLQAAGENEIAGALWLVDEGGLSQQLSQAVWAGFRRPRGNLVAQSLA 442 (671)
T ss_dssp HHHHHHHHHHHHSSS--BCHHHHHHHHHCTTEEEEEEECSSSEEEEEEEEEEECCCHHHHHHHHHTSCCCSSCHHHHHHH
T ss_pred HHHHHHHHHHhcccC--CCHHHHHHHhcCCCceEEEEEECCeEEEEEEEEEcCCcCHHHHHHHHhcccCCCCcchhHHHH
Confidence 344443334444442 2456665543 5788899999999999885311
Q ss_pred ---------cCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceeccccccc-ccCeeecC
Q 007903 510 ---------KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYY-RLKFNCSS 575 (585)
Q Consensus 510 ---------~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YY-rlGF~~~~ 575 (585)
....++|.+|+|+|+|||+|||++||++++ +.++..++....+. .+..+..|| |.||+...
T Consensus 443 ~~~~~~e~~~~~~~~I~~IAV~P~~rg~GiG~~LL~~~e----~~a~~~~~l~v~~~-~n~~ai~FYek~GF~~v~ 513 (671)
T 2zpa_A 443 AHGNNPLAATLRGRRVSRIAVHPARQREGTGRQLIAGAL----QYTQDLDYLSVSFG-YTGELWRFWQRCGFVLVR 513 (671)
T ss_dssp HHSSCTTGGGSEEEEEEEEEECTTSCSSSHHHHHHHHHH----HTCCSCSEEEEEEE-CCHHHHHHHHHTTCEEEE
T ss_pred HhhcchhhcccCceEEEEEEECHHHcCCCHHHHHHHHHH----HHHhcCCEEEEEec-CCHHHHHHHHHCCCEEEe
Confidence 023467999999999999999999999999 55533333222221 123344455 79999873
|
| >1ro5_A Autoinducer synthesis protein LASI; alpha-beta-alpha sandwich, phosphopantetheine fold, signalin; 2.30A {Pseudomonas aeruginosa} SCOP: d.108.1.3 | Back alignment and structure |
|---|
Probab=98.18 E-value=2.9e-06 Score=81.93 Aligned_cols=123 Identities=9% Similarity=0.062 Sum_probs=82.5
Q ss_pred cccccccCHHHHHHHHHHHHHc--cccccC----CHHHHHhccCeEEEEEECCeEEEEEEEeeec---------------
Q 007903 451 TRTAKVTDLSGIKQIIQPLVES--GALVRR----TDEELLKALDSFYVVEREGQIIACAALFPFF--------------- 509 (585)
Q Consensus 451 IR~at~~D~~~I~~Li~~~~~~--~~~~~~----~~e~l~~~i~~~~Va~~dg~IVG~~~l~~~~--------------- 509 (585)
.+..+.+++.++..|.....-. ++..+. ..+.++..-..++++..+|++||++.+.+..
T Consensus 11 ~~~~~~~~~~~~~~LR~~VFv~E~g~~~~~~~~~E~D~~D~~~~~~lv~~~~g~~vGt~Rll~~~~~~~l~~~f~~~~~~ 90 (201)
T 1ro5_A 11 REEFDKKLLGEMHKLRAQVFKERKGWDVSVIDEMEIDGYDALSPYYMLIQEDGQVFGCWRILDTTGPYMLKNTFPELLHG 90 (201)
T ss_dssp GGGSCHHHHHHHHHHHHHHHTTCSSSCCCEETTEECCGGGGSCCEEEEEEETTEEEEEEEEEETTSCCHHHHTCGGGGTT
T ss_pred cccCCHHHHHHHHHHHHHHHHHhcCCCCCCCCCccccCCCCCCCEEEEEEeCCeEEEEEecCCCCCCchhhhhhhhhcCC
Confidence 4566777888888886655433 222111 1122222224566677789999999997532
Q ss_pred -----cCCceEEeeEEEccCCcC----CcHHHHHHHHHHhhhHHHHHHcCCcccCccceecccc-cccccCeee--cCcc
Q 007903 510 -----KEKCGEVAAIGVSPECRG----QGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTH-SYYRLKFNC--SSKS 577 (585)
Q Consensus 510 -----~~~~aeI~~L~V~PeyRG----kGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~-~YYrlGF~~--~~~~ 577 (585)
.+...++.+++|+|++|+ .|+|..|+..++ +++++.|+...-... +.... .|.++||.+ .+..
T Consensus 91 ~~~p~~~~~~ei~R~aV~~~~r~~~~~~~v~~~L~~~~~----~~a~~~g~~~~~~~a-~~~~~~fy~r~G~~~~~~G~~ 165 (201)
T 1ro5_A 91 KEAPCSPHIWELSRFAINSGQKGSLGFSDCTLEAMRALA----RYSLQNDIQTLVTVT-TVGVEKMMIRAGLDVSRFGPH 165 (201)
T ss_dssp CCCCCCTTEEEEEEEEECCSTTCCSCSHHHHHHHHHHHH----HHHHTTTCCEEEEEE-EHHHHHHHHHTTCEEEESSCC
T ss_pred CCCCCCCCEEEeeeeEECchhhccccchHHHHHHHHHHH----HHHHHCCCCEEEEEE-CHHHHHHHHHcCCCeEECCCC
Confidence 234579999999999998 799999999999 899999987643222 23333 444799986 5555
Q ss_pred c
Q 007903 578 F 578 (585)
Q Consensus 578 ~ 578 (585)
|
T Consensus 166 ~ 166 (201)
T 1ro5_A 166 L 166 (201)
T ss_dssp E
T ss_pred e
Confidence 4
|
| >1yle_A Arginine N-succinyltransferase, alpha chain; structural genomics, acyltransferase, arginine metabolism, protein structure initiative; 1.70A {Pseudomonas aeruginosa} SCOP: d.108.1.8 | Back alignment and structure |
|---|
Probab=98.13 E-value=5.2e-06 Score=85.92 Aligned_cols=91 Identities=14% Similarity=0.180 Sum_probs=64.6
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHHhcc-----------------CeEEEEEE--CCeEEEEEEEeee-
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL-----------------DSFYVVER--EGQIIACAALFPF- 508 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i-----------------~~~~Va~~--dg~IVG~~~l~~~- 508 (585)
+.||+++.+|+++|.+|....-..-..+|.+.+.+...+ ..++|+++ +|+|||++.+...
T Consensus 4 ~~IRpa~~~Dl~aL~~La~e~G~G~tsLP~d~e~L~~rI~~S~~sf~~~~~~~~~~~ylfVlED~~~g~VVG~~gI~a~v 83 (342)
T 1yle_A 4 LVMRPAQAADLPQVQRLAADSPVGVTSLPDDAERLRDKILASEASFAAEVSYNGEESYFFVLEDSASGELVGCSAIVASA 83 (342)
T ss_dssp EEEEECCGGGHHHHHHHHHHSCTTCTTSCSCHHHHHHHHHHHHHHHHCTTCCCSCCEEEEEEEETTTCCEEEEEEEESST
T ss_pred eEEecCCHHHHHHHHHHHHHhCCCcCCCCCCHHHHHHHHHHHHHHHHhhccCCCCceEEEEEEECCCCEEEEEEEEEEec
Confidence 469999999999999996544211112344444433211 24668886 6999999966432
Q ss_pred -------------------------------c---cCCceEEeeEEEccCCcCCcHHHHHHHHHH
Q 007903 509 -------------------------------F---KEKCGEVAAIGVSPECRGQGQGDKLLGLCI 539 (585)
Q Consensus 509 -------------------------------~---~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~ 539 (585)
. -....||..|||+|+|||+|+|+.|.+...
T Consensus 84 G~~~PfY~yr~~t~v~~S~~L~v~~~~~~L~L~~d~tg~sEl~tLfl~p~~R~~G~G~lLS~~R~ 148 (342)
T 1yle_A 84 GFSEPFYSFRNETFVHASRSLSIHNKIHVLSLCHDLTGNSLLTSFYVQRDLVQSVYAELNSRGRL 148 (342)
T ss_dssp TSSSCCCEEEEEEEEEEETTTTEEEEEEEEEEECTTTTSEEEEEEEECGGGTTSHHHHHHHHHHH
T ss_pred CCCccceeeeecceeeeccccccccccceEEeecCCCCceEEEEEEECHHHhCCCHHHHHHHHHH
Confidence 0 146789999999999999999999998877
|
| >1bob_A HAT1, histone acetyltransferase; histone modification, acetyl coenzyme A binding-protein; HET: ACO; 2.30A {Saccharomyces cerevisiae} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=98.00 E-value=1.7e-05 Score=81.93 Aligned_cols=97 Identities=10% Similarity=0.233 Sum_probs=67.7
Q ss_pred cccccccccCHHHHHHHHHHHH-------HccccccCCHHHHHhccCeEEEEEE-CCeEEEEEEEeeecc----------
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLV-------ESGALVRRTDEELLKALDSFYVVER-EGQIIACAALFPFFK---------- 510 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~-------~~~~~~~~~~e~l~~~i~~~~Va~~-dg~IVG~~~l~~~~~---------- 510 (585)
++||+++.+| +++.+++..+. +.+..... ++ .....++|++. ++.+|||+.++++..
T Consensus 134 ~eI~~a~~~D-~~~~~L~~r~q~~~l~fIE~~~~id~--dd--~~w~~~~v~e~~~~~ivG~~t~y~~~~~~~~~~f~~~ 208 (320)
T 1bob_A 134 FVVYKSSLVD-DFARRMHRRVQIFSLLFIEAANYIDE--TD--PSWQIYWLLNKKTKELIGFVTTYKYWHYLGAKSFDED 208 (320)
T ss_dssp EEEEEECSCS-HHHHHHHHHHTHHHHHHSTTCCCCCT--TC--TTEEEEEEEETTTCCEEEEEEEEEECCC---------
T ss_pred EEEEEeccCC-HHHHHHHHHHHHHHHhcccCCcccCc--cC--CCceEEEEEEccCCcEEEEEEEEeeeccCCccccccc
Confidence 6899999999 99999866431 11111111 11 22256777776 789999999975432
Q ss_pred ---CCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcc
Q 007903 511 ---EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHIST 553 (585)
Q Consensus 511 ---~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~ 553 (585)
+...+|..+.|+|.|||+|+|++|++++++ .+++..++..
T Consensus 209 ~~~~~R~rIsq~lVlPpyQgkGiG~~Ll~~i~~---~~~~~~~i~~ 251 (320)
T 1bob_A 209 IDKKFRAKISQFLIFPPYQNKGHGSCLYEAIIQ---SWLEDKSITE 251 (320)
T ss_dssp CCCCEEEEEEEEEECGGGCSSSHHHHHHHHHHH---HHHHCTTEEE
T ss_pred ccCCceEEEEEEEEcHHHhCCCHHHHHHHHHHH---HHHhcCCCce
Confidence 346789999999999999999999999982 2344455544
|
| >1xmt_A Putative acetyltransferase; structural genomics, protein structure initiative, CESG, AT1G77540, center for eukaryotic structural genomics; 1.15A {Arabidopsis thaliana} SCOP: d.108.1.1 PDB: 2q44_A 2evn_A 2il4_A* 2q4y_A* | Back alignment and structure |
|---|
Probab=97.94 E-value=6.8e-06 Score=70.86 Aligned_cols=60 Identities=17% Similarity=-0.005 Sum_probs=47.6
Q ss_pred CeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccC
Q 007903 488 DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNG 555 (585)
Q Consensus 488 ~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g 555 (585)
..|++. + .+|++.+....+++..+|..++|+|+|||+|+|++||++++ ++|++.|+....
T Consensus 15 ~rf~~~---~-~vG~i~~~~~~~~~~~~i~~i~V~~~~rg~GiG~~Ll~~~~----~~a~~~g~~~i~ 74 (103)
T 1xmt_A 15 RRFETE---D-HEAFIEYKMRNNGKVMDLVHTYVPSFKRGLGLASHLCVAAF----EHASSHSISIIP 74 (103)
T ss_dssp TEEEET---T-SSSEEEEEEETTTTEEEEEEEECCGGGTTSCHHHHHHHHHH----HHHHHTTCEEEE
T ss_pred ceEEEe---c-cEEEEEEEEcCCCCEEEEEEEEECHHHcCCCHHHHHHHHHH----HHHHHcCCeEEE
Confidence 445554 2 57888876432234789999999999999999999999999 999999987643
|
| >3p2h_A AHL synthase; acyl-ACP binding, SAM binding, signaling protein-I MTA complex, signaling protein-inhibitor complex; HET: MTA NOO; 2.00A {Burkholderia glumae} PDB: 3p2f_A* | Back alignment and structure |
|---|
Probab=97.66 E-value=6.8e-05 Score=72.46 Aligned_cols=120 Identities=10% Similarity=0.071 Sum_probs=73.2
Q ss_pred cccccccCHHHHHHHHHHHHHc--ccccc-----CCHHHHHhccCeEEEEEE-CCeEEEEEEEeeec-------------
Q 007903 451 TRTAKVTDLSGIKQIIQPLVES--GALVR-----RTDEELLKALDSFYVVER-EGQIIACAALFPFF------------- 509 (585)
Q Consensus 451 IR~at~~D~~~I~~Li~~~~~~--~~~~~-----~~~e~l~~~i~~~~Va~~-dg~IVG~~~l~~~~------------- 509 (585)
+...+.+++.++..|.....-. ++..+ ...+.++..-.++++... +|++||++.+.+..
T Consensus 8 ~~~l~~~~~~~~~~LR~~VFv~Eqg~~~~~~~~~~E~D~~D~~~~h~lv~~~~~g~~vgt~Rll~~~~~~~l~~~f~~l~ 87 (201)
T 3p2h_A 8 AGRLPAHIAAELGSYRYRVFVEQLGWQLPSEDEKMERDQYDRDDTVYVLGRDANGEICGCARLLPTTRPYLLQEVFPHLL 87 (201)
T ss_dssp SSSCCHHHHHHHHHHHHHHHTTTSCCSCCCCSSCCCCCTTCCTTCEEEEEECTTSCEEEEEEEEETTSCCHHHHTCGGGC
T ss_pred cccCCHHHHHHHHHHHHHHHHHhhCCCCCCCCCCccccCCCCCCCEEEEEEcCCCeEEEEEEeccccCCccccccChhhc
Confidence 4566777888888886654432 32222 111222222235666665 68999999997521
Q ss_pred ------cCCceEEeeEEEccCC-cC----CcHHHHHHHHHHhhhHHHHHHcCCcccCccceecccccccccCeeec
Q 007903 510 ------KEKCGEVAAIGVSPEC-RG----QGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYYRLKFNCS 574 (585)
Q Consensus 510 ------~~~~aeI~~L~V~Pey-RG----kGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YYrlGF~~~ 574 (585)
.+...|+.+++|+|+| |+ .++|..|+..++ ++++++|+...-...-..-...|.++||.+.
T Consensus 88 ~~~~p~~~~~~EisR~aV~~~~rR~~~g~~~~~~~L~~~~~----~~a~~~g~~~~~~~aq~~~~~~y~rlG~~~~ 159 (201)
T 3p2h_A 88 ADEAPRSAHVWELSRFAATPEEGADAGSLAWSVRPMLAAAV----ECAARRGARQLIGVTFCSMERMFRRIGVHAH 159 (201)
T ss_dssp SSCCCCCTTEEEEEEEEEC----------CTTHHHHHHHHH----HHHHHTTCSEEEEEEEHHHHHHHHHHTCEEE
T ss_pred CCccCCCCCEEEEEEEEEcchhcccccccChHHHHHHHHHH----HHHHHCCCCEEEEEECHHHHHHHHHcCCCeE
Confidence 1456899999999999 65 345999999999 9999999986432221122334557999964
|
| >1kzf_A Acyl-homoserinelactone synthase ESAI; alpha-beta, autoinducer synthase, quorum sensing, bacterial pathogenesis, ligase; 1.80A {Pantoea stewartii subsp} SCOP: d.108.1.3 PDB: 1k4j_A | Back alignment and structure |
|---|
Probab=97.42 E-value=3e-05 Score=76.51 Aligned_cols=85 Identities=12% Similarity=0.075 Sum_probs=61.6
Q ss_pred CeEEEEEECCeEEEEEEEeeecc-------------------CCceEEeeEEEccCCcCCc-------HHHHHHHHHHhh
Q 007903 488 DSFYVVEREGQIIACAALFPFFK-------------------EKCGEVAAIGVSPECRGQG-------QGDKLLGLCIWP 541 (585)
Q Consensus 488 ~~~~Va~~dg~IVG~~~l~~~~~-------------------~~~aeI~~L~V~PeyRGkG-------IGk~LL~~~~~~ 541 (585)
..++++.++|++||++.+.+... .. .||.+++|+|+ |++| +|..|+..++
T Consensus 72 ~~hll~~~~g~~Vgt~RLlp~~~~~~l~~~f~~~~~~~~~p~~~-~Ei~R~aV~~~-r~~g~~~~~~~v~~~L~~al~-- 147 (230)
T 1kzf_A 72 TRYILGICEGQLVCSVRFTSLDRPNMITHTFQHCFSDVTLPAYG-TESSRFFVDKA-RARALLGEHYPISQVLFLAMV-- 147 (230)
T ss_dssp CEEEEEEETTEEEEEEEEEETTSCCCCCCCTHHHHTTSCCCSSC-EEEEEEEECHH-HHHHHHCTTCCHHHHHHHHHH--
T ss_pred CeEEEEEcCCeEEEEEeecCCCcchhhcCcChhhcCCccCCCCC-eEEEEEEEccc-cccccccchhHHHHHHHHHHH--
Confidence 35666677999999999975321 12 69999999999 8887 9999999999
Q ss_pred hHHHHHHcCCcccCccceecccccccccCeee--cCccc
Q 007903 542 LLSETRYDHISTNGFPFLRGRTHSYYRLKFNC--SSKSF 578 (585)
Q Consensus 542 a~~~A~~~gi~~~g~~~~~~~a~~YYrlGF~~--~~~~~ 578 (585)
+++++.|+...-...-......|.++||.+ .+..|
T Consensus 148 --~~a~~~G~~~l~~~aq~~~~~fy~r~G~~~~~~G~~~ 184 (230)
T 1kzf_A 148 --NWAQNNAYGNIYTIVSRAMLKILTRSGWQIKVIKEAF 184 (230)
T ss_dssp --HHHHHTTCSEEEEEEEHHHHHHHHHHCCCCEEEEEEE
T ss_pred --HHHHHCCCCEEEEEeCHHHHHHHHHcCCCeEECCCCe
Confidence 999999987643222122233455799975 45444
|
| >3shp_A Putative acetyltransferase STHE_0691; PSI-biology, midwest center for structural genomics, MCSG; HET: SRT; 2.21A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=96.20 E-value=0.00028 Score=65.42 Aligned_cols=113 Identities=7% Similarity=0.016 Sum_probs=66.4
Q ss_pred ccccccccccCHHHHHHHHHHHHHccccccCCHHH-------HHhc-----cCeEE-EEE-ECCeEEEEEEEeeeccCCc
Q 007903 448 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEE-------LLKA-----LDSFY-VVE-REGQIIACAALFPFFKEKC 513 (585)
Q Consensus 448 ~~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~-------l~~~-----i~~~~-Va~-~dg~IVG~~~l~~~~~~~~ 513 (585)
...+|+++++|++.+.++++. . .+.+.++ +... -...| ++. .++++||++.+. ...+.
T Consensus 13 rl~LR~~~~~D~~~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~iG~~~l~--~~~~~ 84 (176)
T 3shp_A 13 TVYLRAMVEDDKHHAAAWFDS----R--FPVNAARAEAFLKEKLQGDPWDARWHLLAIVRRSDEAVVGSCRIE--FGKQT 84 (176)
T ss_dssp SEEEEECCHHHHHHGGGTCCC----S--CCSCSSSCCCCCCGGGGCCGGGCEEEEEEEEETTTCCEEEEEEEE--ECSSE
T ss_pred eEEEeeCCHHHHHHHHHHHhC----C--CCCCHHHHHHHHHHHhhcCccccCceEEEEEECCCCcEEEEEEEe--cCCCE
Confidence 357999999999988876431 1 1111111 1111 01233 333 478999999994 34567
Q ss_pred eEEeeE---EE-ccCCcCCcHHHHHHHHHHhhhHHHHH-HcCCcccCccc---eecccccccccCeeecCc
Q 007903 514 GEVAAI---GV-SPECRGQGQGDKLLGLCIWPLLSETR-YDHISTNGFPF---LRGRTHSYYRLKFNCSSK 576 (585)
Q Consensus 514 aeI~~L---~V-~PeyRGkGIGk~LL~~~~~~a~~~A~-~~gi~~~g~~~---~~~~a~~YYrlGF~~~~~ 576 (585)
++|.-- ++ +|+||| +.++..++ +++. ..++.+..... ...+.+.|.|+||+..+.
T Consensus 85 ~eig~~~~~~i~~~~~~G----~ea~~~ll----~~af~~~~~~~i~~~v~~~N~~s~~l~ek~GF~~~G~ 147 (176)
T 3shp_A 85 ASLRFHMAPWLDDADVLR----AEALELVV----PWLRDEHELLVITVEIAADEQRTLAAAEAAGLKAAVR 147 (176)
T ss_dssp EEEEEEECTTCSCHHHHH----HHHHHHHH----HHHHHHSCCSEEEEEEETTCHHHHHHHHHTTCEEEEE
T ss_pred EEEEEeecceecChhHhh----HHHHHHHH----HHHHhhCCeEEEEEEEcCCCHHHHHHHHHCCCEEEEE
Confidence 787530 44 899999 66666666 5543 46776543222 223444577899997753
|
| >2p0w_A Histone acetyltransferase type B catalytic subuni; HAT1, structural genomics, structural genomics consortium, S transferase; HET: ACO; 1.90A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.53 E-value=0.064 Score=55.12 Aligned_cols=42 Identities=17% Similarity=0.391 Sum_probs=35.9
Q ss_pred eEEEEEEEeeec---cCCceEEeeEEEccCCcCCcHHHHHHHHHH
Q 007903 498 QIIACAALFPFF---KEKCGEVAAIGVSPECRGQGQGDKLLGLCI 539 (585)
Q Consensus 498 ~IVG~~~l~~~~---~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~ 539 (585)
.++||+.++.++ +.....|..+-|.|.|||+|+|++|++.+.
T Consensus 200 ~~vGy~T~Y~f~~yp~~~R~RISQ~LILPPyQ~kG~G~~Ll~~iy 244 (324)
T 2p0w_A 200 ATVGYMTVYNYYVYPDKTRPRVSQMLILTPFQGQGHGAQLLETVH 244 (324)
T ss_dssp EEEEEEEEEEEEETTTEEEEEEEEEEECGGGTTSSHHHHHHHHHH
T ss_pred EEEEEEEEEEeeecCCcccceeEEEEEcCcccccCcHHHHHHHHH
Confidence 589999987543 334678999999999999999999999998
|
| >3dns_A Ribosomal-protein-alanine acetyltransferase; N-terminal domain of ribosomal-protein-alanine acetyltransfe MCSG, PSI; 2.10A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=93.77 E-value=0.12 Score=46.49 Aligned_cols=81 Identities=10% Similarity=0.180 Sum_probs=58.2
Q ss_pred CeEEEEEECCeEEEEEEEeeec-cCCceEEeeEEEccCCcCCc---HHHHHHHHHHhhhHHHH-HHcCCcccCcccee-c
Q 007903 488 DSFYVVEREGQIIACAALFPFF-KEKCGEVAAIGVSPECRGQG---QGDKLLGLCIWPLLSET-RYDHISTNGFPFLR-G 561 (585)
Q Consensus 488 ~~~~Va~~dg~IVG~~~l~~~~-~~~~aeI~~L~V~PeyRGkG---IGk~LL~~~~~~a~~~A-~~~gi~~~g~~~~~-~ 561 (585)
..|.+-..++++||.+.+.... ..+.+++ .+++-++ |+| +|+.-+..++ +.+ .++++.+..+.... .
T Consensus 20 ~~fiI~~~~~~~IG~i~i~~Id~~nr~a~i-~I~Igk~--gkG~~~ygtEAl~l~l----~y~F~elnlhKi~l~v~~~~ 92 (135)
T 3dns_A 20 REYLITDKYGITIGRIFIVDLNKDNRFCMF-RMKIYKQ--GKSINTYIKEILSVFM----EFLFKSNDINKVNIIVDEEV 92 (135)
T ss_dssp TEEEEEETTCCEEEEEEEEEEETTTTEEEE-EEEECCC--SSCCHHHHHHHHHHHH----HHHHHHSCCSEEEEEEETTS
T ss_pred eEEEEECCCCCEEEEEEEEEeccccCEEEE-EEEEeeC--CCChHHHHHHHHHHHH----HHHHHhcCceEEEEEEecHH
Confidence 3455556689999999997443 4567777 4777676 999 9999999999 543 56788775432222 4
Q ss_pred ccccccccCeeecC
Q 007903 562 RTHSYYRLKFNCSS 575 (585)
Q Consensus 562 ~a~~YYrlGF~~~~ 575 (585)
+.+.|.++||+..+
T Consensus 93 ai~~yeKlGF~~EG 106 (135)
T 3dns_A 93 STQPFVELGFAFEG 106 (135)
T ss_dssp CSHHHHHTTCEEEE
T ss_pred HHHHHHHcCCeEee
Confidence 55678899999775
|
| >4hkf_A Alpha-tubulin N-acetyltransferase; tubulin acetyltransferase, MEC-17, GNAT, acetyl-COA, GNAT FO transferase; HET: ACO; 1.70A {Danio rerio} PDB: 4h6u_A* 4h6z_A* | Back alignment and structure |
|---|
Probab=92.23 E-value=0.68 Score=43.82 Aligned_cols=61 Identities=15% Similarity=0.199 Sum_probs=43.8
Q ss_pred CHHHHHhccCeEEEEEEC------CeEEEEEEEee-----ec-cC-----CceEEeeEEEccCCcCCcHHHHHHHHHH
Q 007903 479 TDEELLKALDSFYVVERE------GQIIACAALFP-----FF-KE-----KCGEVAAIGVSPECRGQGQGDKLLGLCI 539 (585)
Q Consensus 479 ~~e~l~~~i~~~~Va~~d------g~IVG~~~l~~-----~~-~~-----~~aeI~~L~V~PeyRGkGIGk~LL~~~~ 539 (585)
+.+.+...-..+|+..+. +.++|+.-+-. .. .. ....|.++||+|++|++|+|++|+++++
T Consensus 63 s~~rl~~~~~~lYll~d~~~~~g~g~viG~LKvG~K~Lf~~d~~g~~~e~~~lcIlDFyV~es~QR~G~Gk~lfe~mL 140 (191)
T 4hkf_A 63 SAAKLQANRHHLYLLKDGEQNGGRGVIVGFLKVGYKKLFLLDQRGAHLETEPLCVLDFYVTETLQRHGYGSELFDFML 140 (191)
T ss_dssp CHHHHHHSCCEEEEEEETTHHHHTCEEEEEEEEEECCEEEECTTCCEEEECCEEEEEEEECGGGTTSSHHHHHHHHHH
T ss_pred CHHHhccCCceEEEEecccccCCCceEEEEEEecCcceEEEcCCCCEEEEeccEEEeEEEeeeeeccCHHHHHHHHHH
Confidence 456666554666776654 47999987642 11 11 2356788999999999999999999888
|
| >4b5o_A Alpha-tubulin N-acetyltransferase; microtubules, cilium, intraflagellar transport; HET: ACO; 1.05A {Homo sapiens} PDB: 4b5p_A* | Back alignment and structure |
|---|
Probab=91.45 E-value=0.73 Score=43.69 Aligned_cols=61 Identities=13% Similarity=0.221 Sum_probs=40.7
Q ss_pred CHHHHHhccCeEEEEEEC-------CeEEEEEEEee-----ec-cCCc-----eEEeeEEEccCCcCCcHHHHHHHHHH
Q 007903 479 TDEELLKALDSFYVVERE-------GQIIACAALFP-----FF-KEKC-----GEVAAIGVSPECRGQGQGDKLLGLCI 539 (585)
Q Consensus 479 ~~e~l~~~i~~~~Va~~d-------g~IVG~~~l~~-----~~-~~~~-----aeI~~L~V~PeyRGkGIGk~LL~~~~ 539 (585)
+.+.+...-..+|+..+. +.++|+.-+-. +. .... .-|-++||++++|++|+|++|+++++
T Consensus 70 s~~kl~~~d~~lYll~d~~~~~~~~~~v~G~LKvG~K~Lfl~d~~g~~~e~~~lCvLDFYVhEs~QR~G~Gk~LF~~ML 148 (200)
T 4b5o_A 70 SASRMQSNRHVVYILKDSSARPAGKGAIIGFIKVGYKKLFVLDDREAHNEVEPLCILDFYIHESVQRHGHGRELFQYML 148 (200)
T ss_dssp CHHHHHHSCCEEEEEECTTCCCC----EEEEEEEEECCEEEECTTCCEEEECCEEEEEEEECGGGTTSSHHHHHHHHHH
T ss_pred CHHHhccCCcEEEEEeecccccCCCceEEEEEEEeeeeeEEECCCCCEEEeecceEEEEEechhhhhcCcHHHHHHHHH
Confidence 566666555666666542 46889875531 11 1112 23557999999999999999999999
|
| >3iwg_A Acetyltransferase, GNAT family; structural genomics, APC, PSI-2, protein structure initiativ midwest center for structural genomics; HET: MSE; 2.30A {Colwellia psychrerythraea} | Back alignment and structure |
|---|
Probab=91.22 E-value=0.33 Score=48.45 Aligned_cols=45 Identities=11% Similarity=0.078 Sum_probs=37.0
Q ss_pred CeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCCcCCcHHHHHHHHHH
Q 007903 488 DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCI 539 (585)
Q Consensus 488 ~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~ 539 (585)
..+|.+.+++++|||+.++ . ...+..+||+|.||.+| +.|+..+.
T Consensus 43 ~~~~~~~~~~~~~G~~~v~--~---~~~~~~~~~~~~~~~~~--~~lf~~~~ 87 (276)
T 3iwg_A 43 AKHFGFYVNKNLVGFCCVN--D---DGYLLQYYLQPEFQLCS--QELFTLIS 87 (276)
T ss_dssp SEEEEEEETTEEEEEEEEC--T---TSEEEEEEECGGGHHHH--HHHHHHHH
T ss_pred ceEEEEEECCEEEEEEEEc--C---CceeeEEEecHHHHhhH--HHHHHHHH
Confidence 7889999999999999987 2 22566899999999877 78876666
|
| >3to7_A Histone acetyltransferase ESA1; MYST family; HET: ALY COA; 1.90A {Saccharomyces cerevisiae} SCOP: d.108.1.1 PDB: 3to6_A* 1fy7_A* 1mja_A* 1mjb_A* 3to9_A* 1mj9_A* | Back alignment and structure |
|---|
Probab=91.00 E-value=0.51 Score=46.86 Aligned_cols=49 Identities=14% Similarity=0.149 Sum_probs=37.0
Q ss_pred eEEEEEEEeeeccCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCC
Q 007903 498 QIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHI 551 (585)
Q Consensus 498 ~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi 551 (585)
.+|||.+=.. ......-+.+|.|.|.||++|+|+.|++..- +.++..|.
T Consensus 126 h~vGyFSKEK-~s~~~~NLaCIltlP~yQrkGyG~lLI~fSY----eLSr~Eg~ 174 (276)
T 3to7_A 126 HLVGYFSKEK-ESADGYNVACILTLPQYQRMGYGKLLIEFSY----ELSKKENK 174 (276)
T ss_dssp EEEEEEEEES-SCTTCEEESCEEECGGGTTSSHHHHHHHHHH----HHHHHTTC
T ss_pred eecccccccc-cccCCCeEEEEEecChHHcCCccceeehhee----eeeeccCC
Confidence 5777765442 2233456899999999999999999999988 66666654
|
| >2ou2_A Histone acetyltransferase htatip; structural genomics, structural genomics consortium, SGC; HET: ALY ACO; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.82 E-value=0.47 Score=47.37 Aligned_cols=49 Identities=16% Similarity=0.144 Sum_probs=37.2
Q ss_pred eEEEEEEEeeeccCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCC
Q 007903 498 QIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHI 551 (585)
Q Consensus 498 ~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi 551 (585)
.+|||.+=.. .+....-+.+|.|.|.||++|+|+.|++..- +.++..|.
T Consensus 124 h~vGYFSKEK-~s~~~~NLaCIltlP~yQrkGyG~lLI~fSY----eLSr~Eg~ 172 (280)
T 2ou2_A 124 HIVGYFSKEK-ESTEDYNVACILTLPPYQRRGYGKLLIEFSY----ELSKVEGK 172 (280)
T ss_dssp EEEEEEEEES-SCTTCEEESCEEECGGGTTSSHHHHHHHHHH----HHHHHTTC
T ss_pred EEEEEeeccc-cCccccceEEEEecchHHhcchhHHHHHHHH----HHHHhhCc
Confidence 5777755442 2233456899999999999999999999988 66666655
|
| >2ozu_A Histone acetyltransferase MYST3; structural genomics, structural G consortium, SGC; HET: ALY ACO; 2.30A {Homo sapiens} SCOP: d.108.1.1 PDB: 2rc4_A* 1m36_A | Back alignment and structure |
|---|
Probab=90.43 E-value=0.65 Score=46.31 Aligned_cols=49 Identities=12% Similarity=0.166 Sum_probs=36.8
Q ss_pred eEEEEEEEeeeccCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCC
Q 007903 498 QIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHI 551 (585)
Q Consensus 498 ~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi 551 (585)
.+|||.+=.. ......-+.+|.|.|.||++|+|+.|++..- +.++..|.
T Consensus 131 h~vGYFSKEK-~s~~~~NLaCIltlP~yQrkGyG~lLI~fSY----eLSr~Eg~ 179 (284)
T 2ozu_A 131 HLVGYFSKEK-HCQQKYNVSCIMILPQYQRKGYGRFLIDFSY----LLSKREGQ 179 (284)
T ss_dssp EEEEEEEEES-SCTTCEEESEEEECGGGTTSSHHHHHHHHHH----HHHHHTTC
T ss_pred eEEEeeeecc-cccccCcEEEEEecChhHhccHhHHHHHHHH----HHhhhcCc
Confidence 6777754332 2223456899999999999999999999988 66766664
|
| >4h6u_A Alpha-tubulin N-acetyltransferase; tubulin acetyltransferase; HET: ACO; 2.45A {Danio rerio} PDB: 4h6z_A* | Back alignment and structure |
|---|
Probab=89.96 E-value=1 Score=42.63 Aligned_cols=53 Identities=17% Similarity=0.202 Sum_probs=36.0
Q ss_pred CeEEEEEEC------CeEEEEEEEee-----ec-cCC-----ceEEeeEEEccCCcCCcHHHHHHHHHHh
Q 007903 488 DSFYVVERE------GQIIACAALFP-----FF-KEK-----CGEVAAIGVSPECRGQGQGDKLLGLCIW 540 (585)
Q Consensus 488 ~~~~Va~~d------g~IVG~~~l~~-----~~-~~~-----~aeI~~L~V~PeyRGkGIGk~LL~~~~~ 540 (585)
...|+..+. +.++|+.-+-. +. ... ..-|-++||++++|++|+|++|++++++
T Consensus 74 ~~lYll~d~~~~~g~~~v~G~LKvG~K~Lfl~d~~g~~~e~~plCvLDFYVhEs~QR~G~Gk~LF~~ML~ 143 (200)
T 4h6u_A 74 HHLYLLKDGEQNGGRGVIVGFLKVGYKKLFLLDQRGAHLETEPLCVLAFYVTETLQRHGYGSELFDFMLK 143 (200)
T ss_dssp CEEEEEEECC--CCCCEEEEEEEEEECCEEEECTTCCEEEECCEEEEEEEECGGGTTSSHHHHHHHHHHH
T ss_pred ceEEEEEecCCCCCceEEEEEEEEeeeeeeEECCCCCEeecccceeeeeeeehhhcccCcHHHHHHHHHH
Confidence 455655542 35788876532 11 111 1235679999999999999999999993
|
| >2pq8_A Probable histone acetyltransferase MYST1; MOF, structural genomics, structural genomics consortium, SGC; HET: COA; 1.45A {Homo sapiens} PDB: 2giv_A* 3qah_A* 2y0m_A* 3toa_A* 3tob_A* | Back alignment and structure |
|---|
Probab=89.26 E-value=0.84 Score=45.51 Aligned_cols=49 Identities=16% Similarity=0.201 Sum_probs=37.2
Q ss_pred eEEEEEEEeeeccCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCC
Q 007903 498 QIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHI 551 (585)
Q Consensus 498 ~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi 551 (585)
.+|||.+=.. ......-+.+|.|.|.||++|+|+.|++..- +.++..|.
T Consensus 126 h~vGYFSKEK-~s~~~~NLaCIltlP~yQrkGyG~lLI~fSY----eLSr~Eg~ 174 (278)
T 2pq8_A 126 HIVGYFSKEK-ESPDGNNVACILTLPPYQRRGYGKFLIAFSY----ELSKLEST 174 (278)
T ss_dssp EEEEEEEEET-TCTTCEEESCEEECGGGCSSSHHHHHHHHHH----HHHHHTTC
T ss_pred eEEEEeeccc-cccccCceEEEEecChhhccchhHHHHHHHH----HHHhhcCc
Confidence 6777755432 2233456899999999999999999999988 66776655
|
| >4gs4_A Alpha-tubulin N-acetyltransferase; acetyl coenzyme A binding, cytosolic; HET: ACO; 2.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=89.10 E-value=1.2 Score=43.25 Aligned_cols=63 Identities=13% Similarity=0.187 Sum_probs=40.8
Q ss_pred CHHHHHhccCeEEEEEEC-------CeEEEEEEEee-----ec-cCC-----ceEEeeEEEccCCcCCcHHHHHHHHHHh
Q 007903 479 TDEELLKALDSFYVVERE-------GQIIACAALFP-----FF-KEK-----CGEVAAIGVSPECRGQGQGDKLLGLCIW 540 (585)
Q Consensus 479 ~~e~l~~~i~~~~Va~~d-------g~IVG~~~l~~-----~~-~~~-----~aeI~~L~V~PeyRGkGIGk~LL~~~~~ 540 (585)
+.+.+...-..+|+..+. +.++|+.-+-. +. ... ..-|-++||++..|++|+|++|++++++
T Consensus 70 S~~kl~~~d~~lYll~d~~~~~~g~~~v~G~LKvG~K~Lfl~d~~g~~~e~~plCvLDFYVhes~QR~G~Gk~LF~~ML~ 149 (240)
T 4gs4_A 70 SASRMQSNRHVVYILKDSSARPAGKGAIIGFIKVGYKKLFVLDDREAHNEVEPLCILDFYIHESVQRHGHGRELFQYMLQ 149 (240)
T ss_dssp CHHHHHTSCEEEEEEECC--------CEEEEEEEEECCEEEECTTSCEEEECCEEEEEEEECGGGTTSSHHHHHHHHHHH
T ss_pred cHHHHhcCCcEEEEEEecCCCCCCceeEEEEEEEeeeeeEEECCCCCEEEeccceEEEEEeecceeeeccHHHHHHHHHH
Confidence 456665444455555432 34888876632 11 111 2235579999999999999999999994
Q ss_pred h
Q 007903 541 P 541 (585)
Q Consensus 541 ~ 541 (585)
.
T Consensus 150 ~ 150 (240)
T 4gs4_A 150 K 150 (240)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >3gkr_A FEMX; FEMX, peptidoglycan, hexapeptide, transferase, transferase- transferase product complex; HET: UMA; 1.60A {Lactobacillus viridescens} PDB: 1ne9_A 1p4n_A* 1xix_A 1xf8_A 1xe4_A | Back alignment and structure |
|---|
Probab=86.06 E-value=4.1 Score=41.45 Aligned_cols=60 Identities=12% Similarity=0.008 Sum_probs=48.9
Q ss_pred eEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccC
Q 007903 489 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNG 555 (585)
Q Consensus 489 ~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g 555 (585)
.++++..+|++||.+.+.. .++.++...-+.+++ +..+-+..|+-+++ ++|.++|+....
T Consensus 230 ~l~~a~~~g~~vA~~l~~~--~~~~~~~~~~g~~~~-~~~~~~~ll~~~~i----~~a~~~G~~~~D 289 (336)
T 3gkr_A 230 RIFVAEREGKLLSTGIALK--YGRKIWYMYAGSMDG-NTYYAPYAVQSEMI----QWALDTNTDLYD 289 (336)
T ss_dssp EEEEEEETTEEEEEEEEEE--ETTEEEEEEEEECSS-CCTTHHHHHHHHHH----HHHHHTTCSEEE
T ss_pred EEEEEEECCEEEEEEEEEE--ECCEEEEEeeeECch-hccChhHHHHHHHH----HHHHHCCCCEEE
Confidence 5778899999999887763 344666666788999 99999999999999 999999998643
|
| >1iyk_A Myristoyl-COA:protein N-myristoyltransferase; HET: MYA MIM; 2.30A {Candida albicans} SCOP: d.108.1.2 d.108.1.2 PDB: 1iyl_A* 1nmt_A | Back alignment and structure |
|---|
Probab=85.54 E-value=3 Score=43.48 Aligned_cols=55 Identities=15% Similarity=0.179 Sum_probs=45.8
Q ss_pred ECCeEEEEEEEeeec---cCC-----ceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcc
Q 007903 495 REGQIIACAALFPFF---KEK-----CGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHIST 553 (585)
Q Consensus 495 ~dg~IVG~~~l~~~~---~~~-----~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~ 553 (585)
..+++|||+...|.. .++ ..+|.-++||++.|+++++--|++++- .++...|+-+
T Consensus 86 ~s~kLVgFIsgiP~~irv~~~~~~~~~~eINFLCVhKkLRsKRLAPvLIkEIT----RRvn~~gI~Q 148 (392)
T 1iyk_A 86 STGKLVAFIAATPVTFKLNKSNKVIDSVEINFLCIHKKLRNKRLAPVLIKEIT----RRVNKQNIWQ 148 (392)
T ss_dssp TTCCEEEEEEEEEEEEEETTTTEEEEEEEEEEEEECGGGTTSSCHHHHHHHHH----HHHHTTTCCC
T ss_pred CCCcEEEEEeeeeEEEEEcCcCceEEEEEEEEEEEcHhHhhcCCcHHHHHHHH----HHhhhcccee
Confidence 478999999887532 223 679999999999999999999999999 8888888754
|
| >1iic_A Peptide N-myristoyltransferase; HET: MYA; 2.20A {Saccharomyces cerevisiae} SCOP: d.108.1.2 d.108.1.2 PDB: 1iid_A* 2nmt_A* 2p6e_A* 2p6f_A* 2p6g_A* | Back alignment and structure |
|---|
Probab=85.12 E-value=2.5 Score=44.50 Aligned_cols=55 Identities=13% Similarity=0.094 Sum_probs=45.9
Q ss_pred ECCeEEEEEEEeeec------cCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcc
Q 007903 495 REGQIIACAALFPFF------KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHIST 553 (585)
Q Consensus 495 ~dg~IVG~~~l~~~~------~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~ 553 (585)
..+++|||+...|.. .-+..+|.-++||++.|+++++--|++++- .++...|+-+
T Consensus 108 ~s~kLVgFIsgiP~~irv~~~~~~~~eINFLCVHKKLRsKRLAPVLIkEIT----RRvn~~gI~Q 168 (422)
T 1iic_A 108 ETQKLVAFISAIPVTLGVRGKQVPSVEINFLCVHKQLRSKRLTPVLIKEIT----RRVNKCDIWH 168 (422)
T ss_dssp TTCCEEEEEEEEEEEEEETTEEEEEEEEEEEEECGGGTTSSCHHHHHHHHH----HHHHTTTCCC
T ss_pred cCCcEEEEEeceeEEEEEcceEEEeeEEEEEEechhhhhccCcHHHHHHHH----HHhhhcchhe
Confidence 478999999887532 124679999999999999999999999999 8888888754
|
| >2wuu_A N-myristoyltransferase; acyltransferase; HET: NHM; 1.42A {Leishmania donovani} PDB: 3h5z_A* 4a2z_A* 4a30_A* 4a31_A* 4a32_A* 4a33_A* 2wsa_A* | Back alignment and structure |
|---|
Probab=83.58 E-value=3.3 Score=43.51 Aligned_cols=74 Identities=16% Similarity=0.148 Sum_probs=53.4
Q ss_pred ccCCHHHHHhcc------CeE-EEEE--ECCeEEEEEEEeeec------------------------c---CCceEEeeE
Q 007903 476 VRRTDEELLKAL------DSF-YVVE--REGQIIACAALFPFF------------------------K---EKCGEVAAI 519 (585)
Q Consensus 476 ~~~~~e~l~~~i------~~~-~Va~--~dg~IVG~~~l~~~~------------------------~---~~~aeI~~L 519 (585)
..++.+-+.-.+ ..+ ..+. .++++|||+...|.. . -+.++|.-+
T Consensus 90 F~YS~eFL~WaL~pPg~~~~whiGVR~~~~~kLVgFIsgiP~~irv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eINFL 169 (421)
T 2wuu_A 90 FNYSEEFLQWALCPPSYIPDWHVAVRRKADKKLLAFIAGVPVTLRMGTPKYMKVKAQEKGQEEEAAKYDAPRHICEINFL 169 (421)
T ss_dssp ECCCHHHHHHHHCCTTCCGGGEEEEEETTTCCEEEEEEEEEEEEECSCCHHHHHHHHHTTCHHHHHTTCSCEEEEEEEEE
T ss_pred eeCCHHHHHhhcCCCCCCcceEEEEEEccCCcEEEEEeeeeEEEEecccccccccccccccccchhcccceeeeeeEEEE
Confidence 456666655433 122 2223 478999999876521 1 135789999
Q ss_pred EEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcc
Q 007903 520 GVSPECRGQGQGDKLLGLCIWPLLSETRYDHIST 553 (585)
Q Consensus 520 ~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~ 553 (585)
+||++.|+++++--|++++- .++...|+-+
T Consensus 170 CVhKkLRsKRLAPvLIkEIT----RRvn~~gI~q 199 (421)
T 2wuu_A 170 CVHKQLREKRLAPILIKEVT----RRVNRTNVWQ 199 (421)
T ss_dssp EECGGGTTSSHHHHHHHHHH----HHHHHTTCCC
T ss_pred EechhHhhccCcHHHHHHHH----HHhhhcchhh
Confidence 99999999999999999999 8888888854
|
| >2wuu_A N-myristoyltransferase; acyltransferase; HET: NHM; 1.42A {Leishmania donovani} PDB: 3h5z_A* 4a2z_A* 4a30_A* 4a31_A* 4a32_A* 4a33_A* 2wsa_A* | Back alignment and structure |
|---|
Probab=83.32 E-value=5.1 Score=42.12 Aligned_cols=97 Identities=14% Similarity=0.157 Sum_probs=61.6
Q ss_pred cccccccccCHHHHHHHHHHHHHcccc-ccCCHHHHHhcc------CeEEEEEECCeEEEEEEEeeecc-----CCceEE
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGAL-VRRTDEELLKAL------DSFYVVEREGQIIACAALFPFFK-----EKCGEV 516 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~-~~~~~e~l~~~i------~~~~Va~~dg~IVG~~~l~~~~~-----~~~aeI 516 (585)
..+|++++.|++++.+|++.....-.+ ..++.+++...+ -..||++.+|+|-+|++++..+. ++...|
T Consensus 262 ~glR~m~~~Dvp~v~~LL~~yl~~f~la~~ft~eev~Hw~lp~~~Vi~tYVvE~~g~ITDf~SFY~Lpstvi~~~~~~~l 341 (421)
T 2wuu_A 262 SGLREMKPSDVPQVRRILMNYLDNFDVGPVFSDAEISHYLLPRDGVVFTYVVENDKKVTDFFSFYRIPSTVIGNSNYNIL 341 (421)
T ss_dssp TTEEECCGGGHHHHHHHHHHHHTTSSBEECCCHHHHHHHHSCBTTTEEEEEEEETTEEEEEEEEEEEEEEEC------CE
T ss_pred CCcccCchhhHHHHHHHHHHHHHhCCceeeCCHHHHHHhccCcCCceEEEEEeCCCcEeeEEEEEEcceeecCCCcchhh
Confidence 458999999999999998876654333 346777777555 23567777999999998874321 111222
Q ss_pred ee----EEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcc
Q 007903 517 AA----IGVSPECRGQGQGDKLLGLCIWPLLSETRYDHIST 553 (585)
Q Consensus 517 ~~----L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~ 553 (585)
.. .++....+ =..||..++ -.|++.|+.-
T Consensus 342 ~aAY~fY~~~t~~~----l~~Lm~DaL----i~Ak~~gfDV 374 (421)
T 2wuu_A 342 NAAYVHYYAATSMP----LHQLILDLL----IVAHSRGFDV 374 (421)
T ss_dssp EEEEEEEEEESSSC----HHHHHHHHH----HHHHHTTCCE
T ss_pred hhhhhhhhccCCcc----HHHHHHHHH----HHHHHcCCcE
Confidence 21 13333221 245666666 7888888864
|
| >4b14_A Glycylpeptide N-tetradecanoyltransferase; malaria, drug design; HET: NHW 4XB; 1.50A {Plasmodium vivax} PDB: 4b11_A* 4b12_A* 4b13_A* 4b10_A* 4a95_A* | Back alignment and structure |
|---|
Probab=82.92 E-value=7.1 Score=40.82 Aligned_cols=97 Identities=19% Similarity=0.261 Sum_probs=62.3
Q ss_pred cccccccccCHHHHHHHHHHHHHccc-cccCCHHHHHhcc------CeEEEEEECCeEEEEEEEeeec-----cCCceEE
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGA-LVRRTDEELLKAL------DSFYVVEREGQIIACAALFPFF-----KEKCGEV 516 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~-~~~~~~e~l~~~i------~~~~Va~~dg~IVG~~~l~~~~-----~~~~aeI 516 (585)
..+|+++++|++++.+|++.....-. ....+.+++...+ -..+|.+++|+|.++++++..+ .++...|
T Consensus 226 ~glR~m~~~Dv~~v~~Ll~~yl~~f~l~~~f~~ee~~Hw~lp~~~Vi~syVve~~~~itdf~SFY~lps~vi~~~k~~~l 305 (385)
T 4b14_A 226 KNMRLMKKKDVEGVHKLLGSYLEQFNLYAVFTKEEIAHWFLPIENVIYTYVNEENGKIKDMISFYSLPSQILGNDKYSTL 305 (385)
T ss_dssp TTCEECCGGGHHHHHHHHHHHHTTSSEEECCCHHHHHHHHSCBTTTEEEEEEEETTEEEEEEEEEECCEEESSCSSCSEE
T ss_pred CccccCcHhhHHHHHHHHHHHHhcCCeeEecCHHHeeeeeecCCCeEEEEEECCCCcEeEEEEEEEcceeeeCCCCccee
Confidence 45899999999999999887655433 2345777776655 2456789999999999986432 1222222
Q ss_pred eeE----EEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcc
Q 007903 517 AAI----GVSPECRGQGQGDKLLGLCIWPLLSETRYDHIST 553 (585)
Q Consensus 517 ~~L----~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~ 553 (585)
..- ++...- -=..||+.++ -.|++.|+..
T Consensus 306 ~~AY~fY~~~~~~----~l~~l~~dal----i~ak~~~fDV 338 (385)
T 4b14_A 306 NAAYSFYNVTTTA----TFKQLMQDAI----LLAKRNNFDV 338 (385)
T ss_dssp CEEEECCCEESSS----CHHHHHHHHH----HHHHHTTCSE
T ss_pred eeEeEEEeeecCc----cHHHHHHHHH----HHHHHCCCCE
Confidence 221 122211 1235777777 7889999864
|
| >1rxt_A Myristoyl-, glycylpeptide N-tetradecanoyltransferase 1; alpha-beta structure, unique N-myristoyltransferase fold; 3.00A {Homo sapiens} SCOP: d.108.1.2 d.108.1.2 | Back alignment and structure |
|---|
Probab=82.71 E-value=3.2 Score=44.44 Aligned_cols=98 Identities=17% Similarity=0.145 Sum_probs=63.7
Q ss_pred ccccccCHHHHHHHHHHHHHc-------cccccCCHHHHHhcc------CeE-EEEE--ECCeEEEEEEEeeec------
Q 007903 452 RTAKVTDLSGIKQIIQPLVES-------GALVRRTDEELLKAL------DSF-YVVE--REGQIIACAALFPFF------ 509 (585)
Q Consensus 452 R~at~~D~~~I~~Li~~~~~~-------~~~~~~~~e~l~~~i------~~~-~Va~--~dg~IVG~~~l~~~~------ 509 (585)
......|.+.+.+++.-+... .+...++.+-+.-.+ ..+ +.+. ..+++|||+...|..
T Consensus 159 ~t~Dl~~~~~l~Ely~LL~enYVEDdd~mFRF~YS~eFL~WaL~pPG~~k~WhiGVRv~~s~KLVgFIsgiP~~irv~~~ 238 (496)
T 1rxt_A 159 DALDLGDRGVLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIHIYDT 238 (496)
T ss_dssp CCCCCSSHHHHHHHHHHHHTSSCCCCSSCCCBCCCHHHHHHHHCCTTCCGGGSEEEECSSSSCEEEEECCEECCCCCSSS
T ss_pred EecCCCCHHHHHHHHHHHHhCcccCCCCceeeeCCHHHHHHhccCCCCccceEEEEEEccCCeEEEEEeeeEEEEEEcce
Confidence 344555655555554333322 123445666554433 112 2222 578999999887632
Q ss_pred cCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcc
Q 007903 510 KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHIST 553 (585)
Q Consensus 510 ~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~ 553 (585)
.-+..+|.-|+||+.+|+++++--|++++- .++...|+-+
T Consensus 239 ~~~~~eINFLCVHKKLRsKRLAPVLIKEIT----RRvnl~gI~Q 278 (496)
T 1rxt_A 239 EKKMVEINFLCVHKKLRSKRVAPVLIREIT----RRVHLEGIFQ 278 (496)
T ss_dssp CCCCEECCCCEECSSCCCSSSHHHHHHHHH----HHHTTTTCCC
T ss_pred EEEeeeEEEEEecHhhhhccCcHHHHHHHH----HHhhhcceee
Confidence 135789999999999999999999999998 7777777744
|
| >3ddd_A Putative acetyltransferase; NP_142035.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: COA; 2.25A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=82.21 E-value=3.5 Score=40.56 Aligned_cols=151 Identities=14% Similarity=0.048 Sum_probs=79.5
Q ss_pred cHHHHH-HHHHHHHcCCCeEEEecCccchhhHHHHHhcCCC---ceeec--cc-----cccccccccccCHHHHHHHHHH
Q 007903 400 YLSELA-AAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGM---GTMVA--SD-----LYEGTRTAKVTDLSGIKQIIQP 468 (585)
Q Consensus 400 m~~kl~-aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~---GT~i~--~d-----~~~~IR~at~~D~~~I~~Li~~ 468 (585)
+.++|- ++...++.|.+++.+.. .. . ...++.+-|- |+... .+ ....+|++++.| +.+.++-.
T Consensus 103 ig~~Ll~~~~~~~~~~~~~~~l~~-n~-~--a~~~y~k~Gf~~~~~~~~~~~~~~~~~~~~~v~~~~~~d-~~l~~~d~- 176 (288)
T 3ddd_A 103 IGTEVFRRLLEIGRRKVDTIRLDA-SS-Q--GYGLYKKFKFVDEYRTVRYELMERPIKRVEGVVEVNKIP-NWVKEIDK- 176 (288)
T ss_dssp HHHHHHHHHHHHHHHHCSEEEEEE-CT-T--THHHHHHTTCEEEEEEEEEECCSCCSCCCCSEEEESSCC-HHHHHHHH-
T ss_pred HHHHHHHHHHHHHHcCCcEEEEEe-CH-H--HHHHHHHCCCEEeceEEEEEeccCCCCCCcceeEcccCc-HHHHHHhH-
Confidence 555543 33444435777655543 22 2 2455654333 22111 11 113688999999 99888833
Q ss_pred HHHccccccCCHHHHHh---ccCeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHH
Q 007903 469 LVESGALVRRTDEELLK---ALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSE 545 (585)
Q Consensus 469 ~~~~~~~~~~~~e~l~~---~i~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~ 545 (585)
..+...+ ...+.. .-..+.++ ++ +||+.+.+ ..|.-++. ++.++|+.|+..+. ..
T Consensus 177 ---~~~~~~r-~~~l~~~~~~~~~~~~~--~~--~Gy~~~r~------~~igp~~a----~~~~~a~~Ll~~l~----~~ 234 (288)
T 3ddd_A 177 ---KAFGDDR-IRVLEAYMRRGARLLCA--EN--EGFGLVYR------GKIGPLVA----DSPRVAEKILLKAF----QL 234 (288)
T ss_dssp ---HHHSSCC-HHHHHHHHHTTCEEEEE--TT--TEEEEEET------TEEEEEEE----SSHHHHHHHHHHHH----HT
T ss_pred ---HhCCccH-HHHHHHHHcCCCcEEEE--cC--ceEEEEee------cccccccc----CCHHHHHHHHHHHH----hC
Confidence 2222221 122222 22445555 44 99988763 33444443 78899999999998 43
Q ss_pred HHHcCCcccCccceecc-cccccccCeeecCccccccc
Q 007903 546 TRYDHISTNGFPFLRGR-THSYYRLKFNCSSKSFHISL 582 (585)
Q Consensus 546 A~~~gi~~~g~~~~~~~-a~~YYrlGF~~~~~~~~~~~ 582 (585)
|.-....+..+.. ...|.++||........+..
T Consensus 235 ----g~~~ldv~~~n~~a~~l~~~~Gf~~~~~~~~M~~ 268 (288)
T 3ddd_A 235 ----GAREIIIPEVNKDALELIKIFKPSQVTSCMRMRL 268 (288)
T ss_dssp ----TCCEEEEETTCHHHHHHHGGGCCEEEEEEEEEEE
T ss_pred ----CCEEEEecCCCHHHHHHHHHcCCeEeeeEEEeec
Confidence 3211111111222 33456799998866665543
|
| >4b14_A Glycylpeptide N-tetradecanoyltransferase; malaria, drug design; HET: NHW 4XB; 1.50A {Plasmodium vivax} PDB: 4b11_A* 4b12_A* 4b13_A* 4b10_A* 4a95_A* | Back alignment and structure |
|---|
Probab=81.47 E-value=2.4 Score=44.36 Aligned_cols=55 Identities=16% Similarity=0.143 Sum_probs=46.2
Q ss_pred ECCeEEEEEEEeeec------cCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcc
Q 007903 495 REGQIIACAALFPFF------KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHIST 553 (585)
Q Consensus 495 ~dg~IVG~~~l~~~~------~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~ 553 (585)
.++++|||+...|.. .-+..+|.-++||+++|+++++-.|++++. .++...|+-+
T Consensus 108 ~~~kLVgfIsaiP~~irv~~~~~~~~eINFLCVHKklRsKrlAPvLIkEit----RR~n~~gI~q 168 (385)
T 4b14_A 108 ASNKLIGFISAIPTDICIHKRTIKMAEVNFLCVHKTLRSKRLAPVLIKEIT----RRINLENIWQ 168 (385)
T ss_dssp TTTEEEEEEEEEEEEEEETTEEEEEEEEEEEEECGGGTTSSHHHHHHHHHH----HHHHTTTCCE
T ss_pred cCCeEEEEEeeeEEEEEEeceEeeeEEEEEEEEehhHhccCccHHHHHHHH----HHhhccCceE
Confidence 478999999987632 124679999999999999999999999999 8888888755
|
| >3iu1_A Glycylpeptide N-tetradecanoyltransferase 1; N-myristoyltransferase, NMT1, acyltransferase, phosphoprotein, structural genomics; HET: MYA; 1.42A {Homo sapiens} PDB: 3iu2_A* 3iwe_A* 3jtk_A* | Back alignment and structure |
|---|
Probab=80.48 E-value=9.3 Score=39.77 Aligned_cols=55 Identities=13% Similarity=0.146 Sum_probs=46.0
Q ss_pred ECCeEEEEEEEeeec------cCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcc
Q 007903 495 REGQIIACAALFPFF------KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHIST 553 (585)
Q Consensus 495 ~dg~IVG~~~l~~~~------~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~ 553 (585)
..+++|||+...|.. .-+..+|.-++||++.|+++++--|++++. .++...|+-+
T Consensus 105 ~s~kLVgfIsaiP~~irv~~~~~~~~eINFLCVhKkLRsKrLAPvLIkEIT----RRvn~~gI~q 165 (383)
T 3iu1_A 105 SSRKLVGFISAIPANIHIYDTEKKMVEINFLCVHKKLRSKRVAPVLIREIT----RRVHLEGIFQ 165 (383)
T ss_dssp TTCCEEEEEEEEEEEEEETTEEEEEEEEEEEEECGGGTTSSHHHHHHHHHH----HHHHTTTCCC
T ss_pred cCCeEEEEEecceEEEEEcceEeeeeEEEEEEEcHhHHhCCCcHHHHHHHH----HHhhhcchhh
Confidence 479999999887532 124679999999999999999999999999 8888888854
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 585 | ||||
| d2bufa1 | 300 | c.73.1.2 (A:2-301) N-acetyl-l-glutamate kinase {Ps | 4e-35 | |
| d2btya1 | 282 | c.73.1.2 (A:1-282) N-acetyl-l-glutamate kinase {Th | 1e-34 | |
| d2btya1 | 282 | c.73.1.2 (A:1-282) N-acetyl-l-glutamate kinase {Th | 1e-10 | |
| d2ap9a1 | 291 | c.73.1.2 (A:6-296) N-acetyl-l-glutamate kinase {My | 1e-26 | |
| d2ap9a1 | 291 | c.73.1.2 (A:6-296) N-acetyl-l-glutamate kinase {My | 2e-10 | |
| d1e19a_ | 313 | c.73.1.1 (A:) Carbamate kinase {Archaeon Pyrococcu | 6e-15 | |
| d1b7ba_ | 307 | c.73.1.1 (A:) Carbamate kinase {Enterococcus faeci | 4e-10 | |
| d1gs5a_ | 258 | c.73.1.2 (A:) N-acetyl-l-glutamate kinase {Escheri | 6e-08 | |
| d1gs5a_ | 258 | c.73.1.2 (A:) N-acetyl-l-glutamate kinase {Escheri | 3e-07 | |
| d1r57a_ | 102 | d.108.1.1 (A:) Hypothetical protein SA2309 {Staphy | 2e-07 | |
| d2gana1 | 182 | d.108.1.1 (A:1-182) Hypothetical protein PH0736 {P | 3e-06 | |
| d2hv2a2 | 285 | d.108.1.10 (A:2-286) Hypothetical protein EF1021 { | 6e-06 | |
| d1n71a_ | 180 | d.108.1.1 (A:) Aminoglycoside 6'-N-acetyltransfera | 1e-05 | |
| d1qsra_ | 162 | d.108.1.1 (A:) Catalytic domain of GCN5 histone ac | 1e-05 | |
| d2i6ca1 | 160 | d.108.1.1 (A:1001-1160) Putative acetyltransferase | 3e-05 | |
| d1ygha_ | 164 | d.108.1.1 (A:) Catalytic domain of GCN5 histone ac | 6e-05 | |
| d2i00a2 | 291 | d.108.1.10 (A:10-300) Putative acetyltransferase E | 9e-05 | |
| d1z4ra1 | 162 | d.108.1.1 (A:497-658) Catalytic domain of GCN5 his | 3e-04 | |
| d1y9wa1 | 140 | d.108.1.1 (A:1-140) Probable acetyltransferase BC2 | 5e-04 | |
| d2aj6a1 | 118 | d.108.1.1 (A:1-118) Hypothetical protein MW0638 {S | 5e-04 | |
| d1m4ia_ | 181 | d.108.1.1 (A:) Aminoglycoside 2'-N-acetyltransfera | 7e-04 | |
| d1y9ka1 | 152 | d.108.1.1 (A:1-152) IAA acetyltransferase {Bacillu | 0.001 | |
| d1sqha_ | 297 | d.108.1.5 (A:) Hypothetical protein cg14615-pa {Fr | 0.004 | |
| d1p0ha_ | 308 | d.108.1.1 (A:) Mycothiol synthase MshD {Mycobacter | 0.004 |
| >d2bufa1 c.73.1.2 (A:2-301) N-acetyl-l-glutamate kinase {Pseudomonas aeruginosa [TaxId: 287]} Length = 300 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 132 bits (332), Expect = 4e-35
Identities = 64/257 (24%), Positives = 116/257 (45%), Gaps = 25/257 (9%)
Query: 74 TYNPVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYL-DPILKDIAFLHHLGIR 132
T + + Q K EA PY+ G T V+ G + S L +D+ + +GI
Sbjct: 1 TLSRDDAAQVAKVLSEALPYIRRFVGKTLVIKYGGNAMESEELKAGFARDVVLMKAVGIN 60
Query: 133 FVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGG-IRMMIEAKLSPGPP 191
V+V G QI LL E+ ++ R+TD+ ++ GG + I ++
Sbjct: 61 PVVVHGGGPQIGDLLKRLSIESHFIDGMRVTDAATMDVVEMVLGGQVNKDIVNLIN---- 116
Query: 192 ICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVV---------DGVDYGATGEVKKVDVT 242
RHG S+ +G++ + AK+ V + +D G GEV V+V
Sbjct: 117 -----RHGGSA----IGLTGKDAELIRAKKLTVTRQTPEMTKPEIIDIGHVGEVTGVNVG 167
Query: 243 RMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP-ILDESG 301
+ + G + +++ +G S+GE N N VA A A++A+KL+ + + ++D+ G
Sbjct: 168 LLNMLVKGDFIPVIAPIGVGSNGESYNINADLVAGKVAEALKAEKLMLLTNIAGLMDKQG 227
Query: 302 HLIRFLTLQEADSLIRQ 318
++ L+ ++ + LI
Sbjct: 228 QVLTGLSTEQVNELIAD 244
|
| >d2btya1 c.73.1.2 (A:1-282) N-acetyl-l-glutamate kinase {Thermotoga maritima [TaxId: 2336]} Length = 282 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Thermotoga maritima [TaxId: 2336]
Score = 130 bits (328), Expect = 1e-34
Identities = 54/238 (22%), Positives = 95/238 (39%), Gaps = 15/238 (6%)
Query: 82 QFVKWFREAWPYLWAHRGGTFVVIISGEIVSSP-YLDPILKDIAFLHHLGIRFVLVPGTH 140
V EA PY+ G TFV+ G + ++DI L + GI+ ++V G
Sbjct: 4 DTVNVLLEALPYIKEFYGKTFVIKFGGSAMKQENAKKAFIQDIILLKYTGIKPIIVHGGG 63
Query: 141 VQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGD 200
I +++ + G E + +R+TD +++ G N +
Sbjct: 64 PAISQMMKDLGIEPVFKNGHRVTDEKTMEIVEMVLVGK--------------INKEIVMN 109
Query: 201 SSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLG 260
+ V + + + D G G+VKKV+ + ++ + +++ +G
Sbjct: 110 LNLHGGRAVGICGKDSKLIVAEKETKHGDIGYVGKVKKVNPEILHALIENDYIPVIAPVG 169
Query: 261 YSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQ 318
G N N A A ++ A+KLI + D + + G LI LT EA+ LIR
Sbjct: 170 IGEDGHSYNINADTAAAEIAKSLMAEKLILLTDVDGVLKDGKLISTLTPDEAEELIRD 227
|
| >d2btya1 c.73.1.2 (A:1-282) N-acetyl-l-glutamate kinase {Thermotoga maritima [TaxId: 2336]} Length = 282 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Thermotoga maritima [TaxId: 2336]
Score = 60.2 bits (145), Expect = 1e-10
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 399 GYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 443
G + ++ A R GV VH+++G + +LLE+F R G+GTM+
Sbjct: 233 GMIPKVECAVSAVRGGVGAVHIINGGLEHAILLEIFSRKGIGTMI 277
|
| >d2ap9a1 c.73.1.2 (A:6-296) N-acetyl-l-glutamate kinase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 107 bits (268), Expect = 1e-26
Identities = 57/251 (22%), Positives = 89/251 (35%), Gaps = 13/251 (5%)
Query: 73 ETYNPVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYL-DPILKDIAFLHHLGI 131
E + EA P+L G VV G ++ L D+AFL + GI
Sbjct: 2 EALPT---HIKAQVLAEALPWLKQLHGKVVVVKYGGNAMTDDTLRRAFAADMAFLRNCGI 58
Query: 132 RFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPP 191
V+V G QI +L G E + G +R+T E L A G L
Sbjct: 59 HPVVVHGGGPQITAMLRRLGIEGDFKGGFRVTTPEVLDVARMVLFGQVGRELVNLINAHG 118
Query: 192 ICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGG 251
+ G+ ++ + D G G+V +V+ M + + G
Sbjct: 119 PYAVGITGEDAQLF---------TAVRRSVTVDGVATDIGLVGDVDQVNTAAMLDLVAAG 169
Query: 252 CLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQE 311
+ ++S L + G V N N A A A A+ A+KL+ + D L L +
Sbjct: 170 RIPVVSTLAPDADGVVHNINADTAAAAVAEALGAEKLLMLTDIDGLYTRWPDRDSLVSEI 229
Query: 312 ADSLIRQRVKQ 322
+ Q +
Sbjct: 230 DTGTLAQLLPT 240
|
| >d2ap9a1 c.73.1.2 (A:6-296) N-acetyl-l-glutamate kinase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 59.5 bits (143), Expect = 2e-10
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 399 GYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 443
G + ++ A GV H++DG + +L+ELF G GT V
Sbjct: 244 GMVPKVEACLRAVIGGVPSAHIIDGRVTHCVLVELFTDAGTGTKV 288
|
| >d1e19a_ c.73.1.1 (A:) Carbamate kinase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: Carbamate kinase domain: Carbamate kinase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Score = 73.8 bits (180), Expect = 6e-15
Identities = 32/263 (12%), Positives = 66/263 (25%), Gaps = 45/263 (17%)
Query: 99 GGTFVVIISGEIVSSP-----------YLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLL 147
G V+ + G + + + IA + G V+ G Q+ LL
Sbjct: 1 GKRVVIALGGNALQQRGQKGSYEEMMDNVRKTARQIAEIIARGYEVVITHGNGPQVGSLL 60
Query: 148 SERGHEAKYLGRYRITDSESLAAAMEAAGG-IRMMIEAKLSPGPPICNIRRHGDSSRWHE 206
G + A + G I+ ++ +L + + +
Sbjct: 61 LHMDAGQATYGIPAQPMDVAGAMSQGWIGYMIQQALKNELRKRGMEKKVVTIITQTIVDK 120
Query: 207 VGVSVASGNFLAA------------KRKGVVDGVDYG--------ATGEVKKVDVTRMR- 245
+ + + KG + D G + V+ ++
Sbjct: 121 NDPAFQNPTKPVGPFYDEETAKRLAREKGWIVKEDSGRGWRRVVPSPDPKGHVEAETIKK 180
Query: 246 -------ERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPIL- 297
GG V + G + A + AD + + D
Sbjct: 181 LVERGVIVIASGGGGVPVILEDGEIKGVEAVIDKDLAGEKLAEEVNADIFMILTDVNGAA 240
Query: 298 ----DESGHLIRFLTLQEADSLI 316
E +R + ++E
Sbjct: 241 LYYGTEKEQWLREVKVEELRKYY 263
|
| >d1b7ba_ c.73.1.1 (A:) Carbamate kinase {Enterococcus faecium [TaxId: 1352]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: Carbamate kinase domain: Carbamate kinase species: Enterococcus faecium [TaxId: 1352]
Score = 58.8 bits (141), Expect = 4e-10
Identities = 27/259 (10%), Positives = 64/259 (24%), Gaps = 39/259 (15%)
Query: 99 GGTFVVIISGEIVSSP---------YLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSE 149
G VV + G + S L + L G R ++ G Q+ LL +
Sbjct: 1 GKKMVVALGGNAILSNDASAHAQQQALVQTSAYLVHLIKQGHRLIVSHGNGPQVGNLLLQ 60
Query: 150 RGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPP-----------ICNIRRH 198
+ D+ + + +L+ + +
Sbjct: 61 QQAADSEKNPAMPLDTCVAMTQGSIGYWLSNALNQELNKAGIKKQVATVLTQVVVDPADE 120
Query: 199 GDSSRWHEVGVSVASGNFLAAKRK--------GVVDGVDYGATGEVKKVDVTRMRERLDG 250
+ +G + A + G + + + + +
Sbjct: 121 AFKNPTKPIGPFLTEAEAKEAMQAGAIFKEDAGRGWRKVVPSPKPIDIHEAETINTLIKN 180
Query: 251 GCLVILSNL------GYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPIL-----DE 299
+ I G G + + A ++AD L+ + +
Sbjct: 181 DIITISCGGGGIPVVGQELKGVEAVIDKDFASEKLAELVDADALVILTGVDYVCINYGKP 240
Query: 300 SGHLIRFLTLQEADSLIRQ 318
+ +T+ E + +
Sbjct: 241 DEKQLTNVTVAELEEYKQA 259
|
| >d1gs5a_ c.73.1.2 (A:) N-acetyl-l-glutamate kinase {Escherichia coli [TaxId: 562]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Escherichia coli [TaxId: 562]
Score = 52.1 bits (123), Expect = 6e-08
Identities = 11/47 (23%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Query: 399 GYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445
G + ++ AA R + V + L LF MGT + +
Sbjct: 213 GMIVKVNAALDAARTLGRPVDIASWRHAE-QLPALFNGMPMGTRILA 258
|
| >d1gs5a_ c.73.1.2 (A:) N-acetyl-l-glutamate kinase {Escherichia coli [TaxId: 562]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Escherichia coli [TaxId: 562]
Score = 49.8 bits (117), Expect = 3e-07
Identities = 42/220 (19%), Positives = 81/220 (36%), Gaps = 18/220 (8%)
Query: 103 VVIISGEIVSSP-YLDPILKDIAFLHHLGIR-FVLVPGTHVQIDKLLSERGHEAKYLGRY 160
++ + G ++ S L+ + + R V+V G +D+L+ K
Sbjct: 6 IIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGL 65
Query: 161 RITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAK 220
R+T ++ + A G + I + +V
Sbjct: 66 RVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGDSVKV------------- 112
Query: 221 RKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACA 280
+ G G + + L+ G L ++S++G + G+++N N + ATA A
Sbjct: 113 ---TQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALA 169
Query: 281 LAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQRV 320
+ AD ++ ILD G I +T +A+ LI Q +
Sbjct: 170 ATLGADLILLSDVSGILDGKGQRIAEMTAAKAEQLIEQGI 209
|
| >d1r57a_ d.108.1.1 (A:) Hypothetical protein SA2309 {Staphylococcus aureus [TaxId: 1280]} Length = 102 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein SA2309 species: Staphylococcus aureus [TaxId: 1280]
Score = 46.9 bits (111), Expect = 2e-07
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 479 TDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLC 538
++ E+ + + FY+ + E +A + F + GVS E GQG G KLL
Sbjct: 2 SNLEIKQGENKFYIGDDENNALAEIT-YRFVDNNEINIDHTGVSDELGGQGVGKKLLKAV 60
Query: 539 IW 540
+
Sbjct: 61 VE 62
|
| >d2gana1 d.108.1.1 (A:1-182) Hypothetical protein PH0736 {Pyrococcus horikoshii [TaxId: 53953]} Length = 182 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein PH0736 species: Pyrococcus horikoshii [TaxId: 53953]
Score = 45.6 bits (107), Expect = 3e-06
Identities = 35/171 (20%), Positives = 59/171 (34%), Gaps = 38/171 (22%)
Query: 430 LLELFKRDGMGTMVASDLYE-GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALD 488
LLEL R T E R D +G +++ +P ++ L + D
Sbjct: 17 LLELMFRIYRSTNGKYPALEWVKRKPNPNDFNGFREVYEPFLK---------FRLSQEFD 67
Query: 489 SFYVVEREGQIIACAALFP--------------FFKEKCGEVAAIGVSPECRGQGQGDKL 534
Y +++ +II AL EK G + V PE +G+G G L
Sbjct: 68 ELYTYQKDNRIIGTIALVYKRIKEKGIWWVPEELMNEKVGLIEFFVVDPEFQGKGIGSTL 127
Query: 535 LGLCI-------WPLLSETRYDHISTNGFPFLR------GRTHSYYRLKFN 572
L + T + + + + +++ R + LKFN
Sbjct: 128 LEFAVKRLRSLGKDPYVVTFPNLEAYSYY-YMKKGFREIMRYKEFVILKFN 177
|
| >d2hv2a2 d.108.1.10 (A:2-286) Hypothetical protein EF1021 {Enterococcus faecalis [TaxId: 1351]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: EF1021-like domain: Hypothetical protein EF1021 species: Enterococcus faecalis [TaxId: 1351]
Score = 46.0 bits (108), Expect = 6e-06
Identities = 16/124 (12%), Positives = 42/124 (33%), Gaps = 14/124 (11%)
Query: 452 RTAKVTDLSGIKQIIQP-LVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFF- 509
+ ++ + ++ + R+ E L + Y + Q+ + PF
Sbjct: 6 KKMGKEEMKEMFDLVIYAFNQEPTAERQERFEKLLSHTQSYGFLIDEQLTSQVMATPFQV 65
Query: 510 -----KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTH 564
+ + + PE RG+G + +L++ ++ +L ++
Sbjct: 66 NFHGVRYPMAGIGYVASYPEYRGEGGISA----IMKEMLADLAKQKVA---LSYLAPFSY 118
Query: 565 SYYR 568
+YR
Sbjct: 119 PFYR 122
|
| >d1n71a_ d.108.1.1 (A:) Aminoglycoside 6'-N-acetyltransferase {Enterococcus faecium [TaxId: 1352]} Length = 180 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Aminoglycoside 6'-N-acetyltransferase species: Enterococcus faecium [TaxId: 1352]
Score = 43.7 bits (102), Expect = 1e-05
Identities = 13/98 (13%), Positives = 32/98 (32%), Gaps = 2/98 (2%)
Query: 442 MVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIA 501
M+ S+ ++ LS + ++ P + EE++ + +++
Sbjct: 1 MIISE-FDRNNPVLKDQLSDLLRLTWPEEYGDSSAEEV-EEMMNPERIAVAAVDQDELVG 58
Query: 502 CAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCI 539
P + E+ + V R G +L+
Sbjct: 59 FIGAIPQYGITGWELHPLVVESSRRKNQIGTRLVNYLE 96
|
| >d1qsra_ d.108.1.1 (A:) Catalytic domain of GCN5 histone acetyltransferase {Tetrahymena thermophila [TaxId: 5911]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Catalytic domain of GCN5 histone acetyltransferase species: Tetrahymena thermophila [TaxId: 5911]
Score = 43.5 bits (102), Expect = 1e-05
Identities = 9/51 (17%), Positives = 24/51 (47%)
Query: 489 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCI 539
S +++ + ++I + ++ EVA + V+ + +G G +L+
Sbjct: 48 SMVILKNKQKVIGGICFRQYKPQRFAEVAFLAVTANEQVRGYGTRLMNKFK 98
|
| >d2i6ca1 d.108.1.1 (A:1001-1160) Putative acetyltransferase PA4794 {Pseudomonas aeruginosa [TaxId: 287]} Length = 160 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Putative acetyltransferase PA4794 species: Pseudomonas aeruginosa [TaxId: 287]
Score = 42.4 bits (98), Expect = 3e-05
Identities = 22/128 (17%), Positives = 44/128 (34%), Gaps = 8/128 (6%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRR-----TDEELLKALDS---FYVVEREGQIIACA 503
R A+ DL + Q E + + +L A+ V +GQ++ A
Sbjct: 6 RPAETGDLETVAGFPQDRDELFYCYPKAIWPFSVAQLAAAIAERRGSTVAVHDGQVLGFA 65
Query: 504 ALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRT 563
+ + + + V+P RG G L+G+ + + + + F
Sbjct: 66 NFYQWQHGDFCALGNMMVAPAARGLGVARYLIGVMENLAREQYKARLMKISCFNANAAGL 125
Query: 564 HSYYRLKF 571
Y +L +
Sbjct: 126 LLYTQLGY 133
|
| >d1ygha_ d.108.1.1 (A:) Catalytic domain of GCN5 histone acetyltransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 164 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Catalytic domain of GCN5 histone acetyltransferase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 41.6 bits (97), Expect = 6e-05
Identities = 10/51 (19%), Positives = 20/51 (39%)
Query: 489 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCI 539
S V+ + ++ PF K + E+ +S + +G G L+
Sbjct: 49 SMAVIRKPLTVVGGITYRPFDKREFAEIVFCAISSTEQVRGYGAHLMNHLK 99
|
| >d2i00a2 d.108.1.10 (A:10-300) Putative acetyltransferase EF2353 {Enterococcus faecalis [TaxId: 1351]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: EF1021-like domain: Putative acetyltransferase EF2353 species: Enterococcus faecalis [TaxId: 1351]
Score = 42.2 bits (98), Expect = 9e-05
Identities = 17/106 (16%), Positives = 36/106 (33%), Gaps = 17/106 (16%)
Query: 452 RTAKVTDLSGIKQIIQ--------PLVESGALVRRTDEELLKAL---DSFYVVEREGQII 500
+ + + +++ + ESG +R + + + + E Q+I
Sbjct: 4 KPVEEEHIDQFNELLSYVFQVTEADIEESGFENKRAFIKSKQPILELSKVFGWFHENQLI 63
Query: 501 ACAALFPFF------KEKCGEVAAIGVSPECRGQGQGDKLLGLCIW 540
+ A++P K G V +G PE G L+ +
Sbjct: 64 SQIAIYPCEVNIHGALYKMGGVTGVGTYPEYANHGLMKDLIQTALE 109
|
| >d1z4ra1 d.108.1.1 (A:497-658) Catalytic domain of GCN5 histone acetyltransferase {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Catalytic domain of GCN5 histone acetyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.3 bits (91), Expect = 3e-04
Identities = 10/83 (12%), Positives = 25/83 (30%), Gaps = 4/83 (4%)
Query: 490 FYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYD 549
+ ++G++I F + E+ V+ + +G G + L
Sbjct: 54 TLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTSNEQVKGYGTH----LMNHLKEYHIKH 109
Query: 550 HISTNGFPFLRGRTHSYYRLKFN 572
+I + + F+
Sbjct: 110 NILYFLTYADEYAIGYFKKQGFS 132
|
| >d1y9wa1 d.108.1.1 (A:1-140) Probable acetyltransferase BC2806 {Bacillus cereus [TaxId: 1396]} Length = 140 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase BC2806 species: Bacillus cereus [TaxId: 1396]
Score = 38.3 bits (88), Expect = 5e-04
Identities = 12/52 (23%), Positives = 17/52 (32%), Gaps = 2/52 (3%)
Query: 489 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIW 540
S V EG+I +F + + V R G G +LL
Sbjct: 41 SLVVKNEEGKIFGGVTGTMYFYHLH--IDFLWVDESVRHDGYGSQLLHEIEG 90
|
| >d2aj6a1 d.108.1.1 (A:1-118) Hypothetical protein MW0638 {Staphylococcus aureus [TaxId: 1280]} Length = 118 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein MW0638 species: Staphylococcus aureus [TaxId: 1280]
Score = 38.0 bits (87), Expect = 5e-04
Identities = 21/99 (21%), Positives = 34/99 (34%), Gaps = 15/99 (15%)
Query: 452 RTAKVTDLSGIKQIIQ---PLVESGALVRRTDEE------------LLKALDSFYVVERE 496
RT + + IKQI L+ + + L D Y+ E E
Sbjct: 2 RTLNKDEHNYIKQIANIHETLLSQVESNYKCTKLSIALRYEMICSRLEHTNDKIYIYENE 61
Query: 497 GQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLL 535
GQ+IA ++ + + V P+ R G +L
Sbjct: 62 GQLIAFIWGHFSNEKSMVNIELLYVEPQFRKLGIATQLK 100
|
| >d1m4ia_ d.108.1.1 (A:) Aminoglycoside 2'-N-acetyltransferase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 181 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Aminoglycoside 2'-N-acetyltransferase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 38.6 bits (89), Expect = 7e-04
Identities = 23/96 (23%), Positives = 34/96 (35%), Gaps = 8/96 (8%)
Query: 452 RTAKVTDLS-GIKQIIQPLVESGALVRRTDEELLKALDSFYV-VEREGQIIACAALFPF- 508
R DL +Q I+ +V T+ + L + + G IIA AA+
Sbjct: 9 RLVHTADLDSETRQDIRQMVTGAFAGDFTETDWEHTLGGMHALIWHHGAIIAHAAVIQRR 68
Query: 509 -----FKEKCGEVAAIGVSPECRGQGQGDKLLGLCI 539
+CG V + V + RGQ LL
Sbjct: 69 LIYRGNALRCGYVEGVAVRADWRGQRLVSALLDAVE 104
|
| >d1y9ka1 d.108.1.1 (A:1-152) IAA acetyltransferase {Bacillus cereus [TaxId: 1396]} Length = 152 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: IAA acetyltransferase species: Bacillus cereus [TaxId: 1396]
Score = 37.4 bits (86), Expect = 0.001
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 490 FYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQ 530
YV ++ G +I L + K E+ I V+ +G+G
Sbjct: 37 TYVAKQGGSVIGVYVLLE-TRPKTMEIMNIAVAEHLQGKGI 76
|
| >d1sqha_ d.108.1.5 (A:) Hypothetical protein cg14615-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: Hypothetical protein cg14615-pa domain: Hypothetical protein cg14615-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 37.3 bits (86), Expect = 0.004
Identities = 24/191 (12%), Positives = 48/191 (25%), Gaps = 31/191 (16%)
Query: 396 RLNGYLSELAAA--AFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEG--T 451
L RGV + + L D DL
Sbjct: 117 LLTNVDLGFCNRVKELAVSRGVTAIQPRQ-----CFGMVLSHEDAF-CAKVPDLPSEFEI 170
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVERE-GQIIACAALFPFFK 510
R + D + + G + L++ S + + G++IA F
Sbjct: 171 RRLRAEDAAMVHDSWPN---KGEGSLTYLQALVRFNKSLGICRSDTGELIAWIFQNDF-- 225
Query: 511 EKCGEVAAIGVSPECRGQGQGDKLLGLCI--------WPLLSETRYDHISTNGF----PF 558
+ + V P+ +G G L L + + + +
Sbjct: 226 ---SGLGMLQVLPKAERRGLGGLLAAAMSREIARGEEITLTAWIVATNWRSEALLKRIGY 282
Query: 559 LRGRTHSYYRL 569
+ + + +L
Sbjct: 283 QKDLVNEWIKL 293
|
| >d1p0ha_ d.108.1.1 (A:) Mycothiol synthase MshD {Mycobacterium tuberculosis [TaxId: 1773]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Mycothiol synthase MshD species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 37.4 bits (85), Expect = 0.004
Identities = 16/91 (17%), Positives = 31/91 (34%), Gaps = 9/91 (9%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDS-------FYVVEREGQIIACAA 504
+ ++ ++ + V E++L+ L G II
Sbjct: 6 SALTADEQRSVRALVT-ATTAVDGVAPVGEQVLRELGQQRTEHLLVAGSRPGGPIIGYLN 64
Query: 505 LFPFFKEKCGEVAAIGVSPECRGQGQGDKLL 535
L P + G +A + V P+ R +G G +
Sbjct: 65 LSPP-RGAGGAMAELVVHPQSRRRGIGTAMA 94
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 585 | |||
| d2bufa1 | 300 | N-acetyl-l-glutamate kinase {Pseudomonas aeruginos | 100.0 | |
| d2btya1 | 282 | N-acetyl-l-glutamate kinase {Thermotoga maritima [ | 100.0 | |
| d2ap9a1 | 291 | N-acetyl-l-glutamate kinase {Mycobacterium tubercu | 100.0 | |
| d1e19a_ | 313 | Carbamate kinase {Archaeon Pyrococcus furiosus [Ta | 100.0 | |
| d1b7ba_ | 307 | Carbamate kinase {Enterococcus faecium [TaxId: 135 | 100.0 | |
| d1gs5a_ | 258 | N-acetyl-l-glutamate kinase {Escherichia coli [Tax | 100.0 | |
| d2akoa1 | 250 | Glutamate 5-kinase {Campylobacter jejuni [TaxId: 1 | 99.94 | |
| d2brxa1 | 225 | Uridylate kinase PyrH {Pyrococcus furiosus [TaxId: | 99.93 | |
| d2ij9a1 | 219 | Uridylate kinase PyrH {Archaeoglobus fulgidus [Tax | 99.9 | |
| d1ybda1 | 236 | Uridylate kinase PyrH {Neisseria meningitidis [Tax | 99.85 | |
| d2a1fa1 | 236 | Uridylate kinase PyrH {Haemophilus influenzae [Tax | 99.84 | |
| d1z9da1 | 238 | Uridylate kinase PyrH {Streptococcus pyogenes [Tax | 99.78 | |
| d2fiwa1 | 156 | Probable N-acetyltransferase RPA1999 {Rhodopseudom | 99.51 | |
| d2hmfa1 | 302 | Aspartokinase {Methanococcus jannaschii [TaxId: 21 | 99.5 | |
| d1z4ea1 | 150 | Transcriptional regulator BH1968 {Bacillus halodur | 99.49 | |
| d2fe7a1 | 156 | Probable N-acetyltransferase PA0478 {Pseudomonas a | 99.49 | |
| d1i12a_ | 157 | Glucosamine-phosphate N-acetyltransferase GNA1 {Ba | 99.43 | |
| d2cdqa1 | 304 | Aspartokinase {Thale cress (Arabidopsis thaliana) | 99.41 | |
| d1yr0a1 | 163 | Phosphinothricin acetyltransferase {Agrobacterium | 99.38 | |
| d1qsra_ | 162 | Catalytic domain of GCN5 histone acetyltransferase | 99.38 | |
| d2atra1 | 137 | Probable acetyltransferase SP0256 {Streptococcus p | 99.38 | |
| d1tiqa_ | 173 | Protease synthase and sporulation negative regulat | 99.38 | |
| d2aj6a1 | 118 | Hypothetical protein MW0638 {Staphylococcus aureus | 99.35 | |
| d2j0wa1 | 292 | Aspartokinase {Escherichia coli [TaxId: 562]} | 99.34 | |
| d2fiaa1 | 157 | Probable acetyltransferase EF1919 {Enterococcus fa | 99.33 | |
| d2i6ca1 | 160 | Putative acetyltransferase PA4794 {Pseudomonas aer | 99.32 | |
| d1ghea_ | 170 | Tabtoxin resistance protein {Pseudomonas syringae | 99.3 | |
| d1y7ra1 | 133 | Hypothetical protein SA2161 {Staphylococcus aureus | 99.3 | |
| d1s3za_ | 147 | Aminoglycoside N-acetyltransferase AAC(6')-IY {Sal | 99.3 | |
| d1mk4a_ | 157 | Hypothetical protein YqiY {Bacillus subtilis [TaxI | 99.29 | |
| d1y9wa1 | 140 | Probable acetyltransferase BC2806 {Bacillus cereus | 99.29 | |
| d1cjwa_ | 166 | Serotonin N-acetyltranferase {Sheep (Ovis aries) [ | 99.29 | |
| d1yx0a1 | 151 | Hypothetical protein YsnE {Bacillus subtilis [TaxI | 99.29 | |
| d1yvoa1 | 169 | Hypothetical protein PA4866 {Pseudomonas aeruginos | 99.28 | |
| d1ygha_ | 164 | Catalytic domain of GCN5 histone acetyltransferase | 99.26 | |
| d1n71a_ | 180 | Aminoglycoside 6'-N-acetyltransferase {Enterococcu | 99.26 | |
| d2ae6a1 | 161 | Putative acetyltransferase EF0244 {Enterococcus fa | 99.26 | |
| d2euia1 | 153 | Probable acetyltransferase PA4026 {Pseudomonas aer | 99.25 | |
| d1u6ma_ | 189 | Putative acetyltransferase EF0945 {Enterococcus fa | 99.24 | |
| d2cy2a1 | 174 | Probable acetyltransferase TTHA1209 {Thermus therm | 99.24 | |
| d1vkca_ | 149 | Putative acetyltransferase PF0028 {Pyrococcus furi | 99.22 | |
| d1vhsa_ | 165 | Putative phosphinothricin acetyltransferase YwnH { | 99.21 | |
| d1qsma_ | 150 | Histone acetyltransferase HPA2 {Baker's yeast (Sac | 99.21 | |
| d2jdca1 | 145 | Probable acetyltransferase YitI {Bacillus lichenif | 99.19 | |
| d1ufha_ | 155 | Putative acetyltransferase YycN {Bacillus subtilis | 99.18 | |
| d2fl4a1 | 146 | Probable spermine/spermidine acetyltransferase EF1 | 99.18 | |
| d1bo4a_ | 137 | Aminoglycoside 3-N-acetyltransferase {Serratia mar | 99.17 | |
| d1xeba_ | 149 | Hypothetical protein PA0115 {Pseudomonas aeruginos | 99.16 | |
| d1q2ya_ | 140 | Probable acetyltransferase YjcF {Bacillus subtilis | 99.16 | |
| d2b5ga1 | 167 | Diamine acetyltransferase 1 {Human (Homo sapiens) | 99.15 | |
| d1z4ra1 | 162 | Catalytic domain of GCN5 histone acetyltransferase | 99.15 | |
| d1wwza1 | 157 | Hypothetical protein PH1933 {Pyrococcus horikoshii | 99.15 | |
| d2ozga2 | 283 | Putative acetyltransferase Ava4977 {Anabaena varia | 99.13 | |
| d2g3aa1 | 137 | Probable acetyltransferase Atu2258 {Agrobacterium | 99.13 | |
| d2ge3a1 | 164 | Probable acetyltransferase Atu2290 {Agrobacterium | 99.13 | |
| d1y9ka1 | 152 | IAA acetyltransferase {Bacillus cereus [TaxId: 139 | 99.11 | |
| d2gana1 | 182 | Hypothetical protein PH0736 {Pyrococcus horikoshii | 99.1 | |
| d2beia1 | 167 | Diamine acetyltransferase 2 {Human (Homo sapiens) | 99.08 | |
| d1yvka1 | 152 | Hypothetical protein YvbK (BSu33890) {Bacillus sub | 99.07 | |
| d2hv2a2 | 285 | Hypothetical protein EF1021 {Enterococcus faecalis | 99.03 | |
| d2i00a2 | 291 | Putative acetyltransferase EF2353 {Enterococcus fa | 98.99 | |
| d1m4ia_ | 181 | Aminoglycoside 2'-N-acetyltransferase {Mycobacteri | 98.85 | |
| d1r57a_ | 102 | Hypothetical protein SA2309 {Staphylococcus aureus | 98.7 | |
| d1p0ha_ | 308 | Mycothiol synthase MshD {Mycobacterium tuberculosi | 98.52 | |
| d1sqha_ | 297 | Hypothetical protein cg14615-pa {Fruit fly (Drosop | 98.51 | |
| d1nsla_ | 180 | Probable acetyltransferase YdaF {Bacillus subtilis | 98.51 | |
| d1yrea1 | 183 | Hypothetical protein PA3270 {Pseudomonas aeruginos | 98.41 | |
| d1s7ka1 | 174 | L7/L12-Ribosomal-protein-serine acetyltransferase | 98.38 | |
| d1yk3a1 | 198 | Hypothetical protein Rv1347c/MT1389 {Mycobacterium | 98.31 | |
| d2fcka1 | 178 | Putative ribosomal-protein-serine acetyltransferas | 98.22 | |
| d1p0ha_ | 308 | Mycothiol synthase MshD {Mycobacterium tuberculosi | 98.22 | |
| d2fsra1 | 164 | Probable acetyltranferase Atu2435 {Agrobacterium t | 97.99 | |
| d1ylea1 | 338 | Arginine N-succinyltransferase, alpha chain, AstA | 97.39 | |
| d1ro5a_ | 197 | Autoinducer synthesis protein LasI {Pseudomonas ae | 96.84 | |
| d1xmta_ | 95 | Hypothetical protein AT1g77540 {Thale cress (Arabi | 96.38 | |
| d1lrza3 | 182 | Methicillin resistance protein FemA {Staphylococcu | 95.5 | |
| d1kzfa_ | 210 | Acyl-homoserinelactone synthase EsaI {Pantoea stew | 94.07 | |
| d2giva1 | 271 | Probable histone acetyltransferase MYST1 {Human (H | 92.66 | |
| d1boba_ | 315 | Histone acetyltransferase HAT1 {Baker's yeast (Sac | 92.57 | |
| d1ne9a2 | 171 | Peptidyltransferase FemX {Weissella viridescens [T | 92.37 | |
| d1rxta1 | 141 | N-myristoyl transferase, NMT {Human (Homo sapiens) | 91.36 | |
| d2ozua1 | 270 | Histone acetyltransferase MYST3 {Human (Homo sapie | 90.7 | |
| d1fy7a_ | 273 | Histone acetyltransferase ESA1 {Baker's yeast (Sac | 90.63 | |
| d1iyka1 | 165 | N-myristoyl transferase, NMT {Yeast (Candida albic | 89.55 | |
| d1iica1 | 185 | N-myristoyl transferase, NMT {Baker's yeast (Sacch | 88.27 |
| >d2bufa1 c.73.1.2 (A:2-301) N-acetyl-l-glutamate kinase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=7.2e-58 Score=471.38 Aligned_cols=281 Identities=28% Similarity=0.477 Sum_probs=261.3
Q ss_pred hhHHHHHHHHhhhHHHhhcCCeEEEEeCCccCCCCC-hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccC
Q 007903 80 DEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLG 158 (585)
Q Consensus 80 ~~~~~~~~r~a~~yi~~~r~k~iVIKlGGs~l~~~~-l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~ 158 (585)
..+|++|||+|+|||++||+|+|||||||+++.+++ +.++++||+.|+..|.++|||||||||+++.++++++++++++
T Consensus 7 ~~~~~~~l~~a~PYi~~~r~ktiVIKlGG~~l~~~~~~~~~~~dIa~L~~~G~~vViVhGgg~~i~~~l~~~gi~~~~~~ 86 (300)
T d2bufa1 7 AAQVAKVLSEALPYIRRFVGKTLVIKYGGNAMESEELKAGFARDVVLMKAVGINPVVVHGGGPQIGDLLKRLSIESHFID 86 (300)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSSHHHHHHHHHHHHHHHTTCEEEEEECCCHHHHHHHHHTTCCCCBSS
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEEEEChHHhCChhHHHHHHHHHHHHHHcCCcEEEecChHHHHHHHHHhcccCceecC
Confidence 578999999999999999999999999999999877 6899999999999999999999999999999999999999999
Q ss_pred CccCCCHHHHHHH-HHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeecccc---------ccc
Q 007903 159 RYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVV---------DGV 228 (585)
Q Consensus 159 g~rvt~~~~l~~~-~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~---------~g~ 228 (585)
|+|+|++++|+++ ++++|++|..|++.| .++|++ ++++++.|++++.+++..+. +++
T Consensus 87 g~RvT~~~~l~~~~~~~~g~vn~~lv~~l---------~~~g~~----a~~l~~~d~~~i~~~~~~~~~~~~~~~~~~~i 153 (300)
T d2bufa1 87 GMRVTDAATMDVVEMVLGGQVNKDIVNLI---------NRHGGS----AIGLTGKDAELIRAKKLTVTRQTPEMTKPEII 153 (300)
T ss_dssp SSBCBCHHHHHHHHHHHHHTHHHHHHHHH---------HHTTCC----EEEEEETGGGCEEEEECCCCCC--------CC
T ss_pred CcccccchhHHHHHHHHHhHHHHHHHHHH---------HhcCCc----ccccCCCccceEEeecccccccCccccccccc
Confidence 9999999999998 677899999999864 788887 89999999999998876532 568
Q ss_pred cCcceeeEEEecHHHHHHHHcCCCeEEEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeeccccc-CCCCcccccc
Q 007903 229 DYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPIL-DESGHLIRFL 307 (585)
Q Consensus 229 d~g~~G~v~~v~~~~I~~lL~~G~IPVi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl-~~~~~lI~~i 307 (585)
|++++|+|+.+|++.|+.||+.|+|||++|++++.+|+++|+|+|.+|+++|.+|+||+||||||+||+ +.++++++++
T Consensus 154 d~g~~G~v~~v~~~~i~~ll~~g~Ipvis~~~~~~~G~~~nin~D~~Aa~lA~~L~AdkLI~Ltdv~Gv~~~~g~~~~~l 233 (300)
T d2bufa1 154 DIGHVGEVTGVNVGLLNMLVKGDFIPVIAPIGVGSNGESYNINADLVAGKVAEALKAEKLMLLTNIAGLMDKQGQVLTGL 233 (300)
T ss_dssp CCBSBEEEEEECHHHHHHHHHTTCEEEEEEEEECTTSCEEECCHHHHHHHHHHHHTCSEEEEEESSSCCBCTTSCBCCEE
T ss_pred ccCcccceeecchhHHHHHhcCCCeEEecccccCcccchhcccHHHHHHHHHHHcCCCeEEEEcCCCccccCCCcchhhc
Confidence 999999999999999999999999999999999999999999999999999999999999999999998 6789999999
Q ss_pred cHHHHHHHHHhhchhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccc
Q 007903 308 TLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFA 387 (585)
Q Consensus 308 t~~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a 387 (585)
+.++++++++++. ++ | |
T Consensus 234 ~~~~~~~li~~~~-----------------------------i~------------------------g-G--------- 250 (300)
T d2bufa1 234 STEQVNELIADGT-----------------------------IY------------------------G-G--------- 250 (300)
T ss_dssp CHHHHHHHHHTTC-----------------------------SC------------------------T-T---------
T ss_pred cHHHHHHHHHcCC-----------------------------cC------------------------c-h---------
Confidence 9999999986533 22 4 5
Q ss_pred cccccccccccCcHHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeeccccc
Q 007903 388 IGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLY 448 (585)
Q Consensus 388 ~~~~~~~~~~~~m~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~~d~~ 448 (585)
|++||++|..||+.||+||||+||+.+++||.|||+++|+||+|+++.|
T Consensus 251 ------------M~~Kl~aa~~a~~~Gv~rv~Ii~g~~~~~ll~eLft~~g~GT~I~~~~~ 299 (300)
T d2bufa1 251 ------------MLPKIRCALEAVQGGVTSAHIIDGRVPNAVLLEIFTDSGVGTLISNRKR 299 (300)
T ss_dssp ------------HHHHHHHHHHHHHTTCSEEEEEETTSTTHHHHHHSSTTCCSEEEECCCC
T ss_pred ------------HHHHHHHHHHHHHcCCCEEEEecCCCCCHHHHHHcCCCCceeEEecCCC
Confidence 9999999999999999999999999999999999999999999998876
|
| >d2btya1 c.73.1.2 (A:1-282) N-acetyl-l-glutamate kinase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=1.3e-52 Score=428.41 Aligned_cols=276 Identities=29% Similarity=0.464 Sum_probs=253.8
Q ss_pred hHHHHHHHHhhhHHHhhcCCeEEEEeCCccCCCCC-hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCC
Q 007903 81 EQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGR 159 (585)
Q Consensus 81 ~~~~~~~r~a~~yi~~~r~k~iVIKlGGs~l~~~~-l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g 159 (585)
.+||+.||||+|||++||+|+||||+||+++++++ ++++++||+.|++.|+++||||||+++++..+.++++++++..+
T Consensus 3 ~~~~~~~~~~~pyi~~~r~k~iVIKlGgsvi~~~~~~~~l~~dIa~L~~~G~~iVlVhGg~~~~~~~l~~~~i~~~~~~~ 82 (282)
T d2btya1 3 IDTVNVLLEALPYIKEFYGKTFVIKFGGSAMKQENAKKAFIQDIILLKYTGIKPIIVHGGGPAISQMMKDLGIEPVFKNG 82 (282)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEEEEECSHHHHSHHHHHHHHHHHHHHHHTTCEEEEEECCSHHHHHHHHHHTCCCCBSSS
T ss_pred chHHHHHHHHHHHHHHhCCCEEEEEECchHhCChhHHHHHHHHHHHHHHCCCeEEEEECCCccchhhHHHcCCcceeccC
Confidence 57999999999999999999999999999999877 78999999999999999999999999999999999999999999
Q ss_pred ccCCCHHHHHHH-HHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEE
Q 007903 160 YRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKK 238 (585)
Q Consensus 160 ~rvt~~~~l~~~-~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~ 238 (585)
.|+|+.+.++++ ++.++.+|..++..| .++|++ ++++++.+.....+.. ..+..|++++|+++.
T Consensus 83 ~~~t~~~~~~~~~~~~~~~~n~~~~~~l---------~~~g~~----a~~l~~~~~~~~~~~~--~~~~~d~~~~g~~~~ 147 (282)
T d2btya1 83 HRVTDEKTMEIVEMVLVGKINKEIVMNL---------NLHGGR----AVGICGKDSKLIVAEK--ETKHGDIGYVGKVKK 147 (282)
T ss_dssp SBCBCHHHHHHHHHHHHHTHHHHHHHHH---------HTTTCC----EEEEETTGGGSEEEEE--CCTTCCCBSBEEEEE
T ss_pred ccccchhhHHHHHHHHhchhhHHHHHHH---------HhcCCC----eeeeeccccceeEecc--ccccccccccccccc
Confidence 999999999997 678899999888854 678877 7899888877666553 356789999999999
Q ss_pred ecHHHHHHHHcCCCeEEEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccCCCCcccccccHHHHHHHHHh
Q 007903 239 VDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQ 318 (585)
Q Consensus 239 v~~~~I~~lL~~G~IPVi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~~~~~lI~~it~~e~~~li~~ 318 (585)
+|.+.|+.+|++|.|||++|++++++|+++|+|+|++|+.+|.+|+||+|||+||+||+.+++++|++++.+|++.++.+
T Consensus 148 v~~~~i~~lL~~~~ipvi~~~~~~~~g~~~nl~~d~~aa~iA~~l~AdkLI~ltdv~Gl~~d~~~i~~~~~~~~~~~~~~ 227 (282)
T d2btya1 148 VNPEILHALIENDYIPVIAPVGIGEDGHSYNINADTAAAEIAKSLMAEKLILLTDVDGVLKDGKLISTLTPDEAEELIRD 227 (282)
T ss_dssp ECTHHHHHHHHTTCEEEEESEEECSSSCEEECCHHHHHHHHHHHHTCSEEEEEESSSSCEETTEECCEECHHHHHHHHTT
T ss_pred cChHHHHHHHhCCCceeecCcccCCcceeeeccccchhHHHhhhcCCceeEEeccccceecCccccccCCHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999888999999999998888644
Q ss_pred hchhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCccccccccccccccccccc
Q 007903 319 RVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLN 398 (585)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~ 398 (585)
+. + +| |
T Consensus 228 ~~-----------------------------~------------------------tg-G-------------------- 233 (282)
T d2btya1 228 GT-----------------------------V------------------------TG-G-------------------- 233 (282)
T ss_dssp TC-----------------------------S------------------------CT-T--------------------
T ss_pred CC-----------------------------c------------------------Cc-h--------------------
Confidence 21 1 24 5
Q ss_pred CcHHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeeccc
Q 007903 399 GYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446 (585)
Q Consensus 399 ~m~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~~d 446 (585)
|.+||++|..||+.||+||||+||+.+++||.|+|++++.||+|..+
T Consensus 234 -M~~Kl~aA~~A~~~GV~~v~I~~g~~~~~ll~elft~~g~GT~I~~~ 280 (282)
T d2btya1 234 -MIPKVECAVSAVRGGVGAVHIINGGLEHAILLEIFSRKGIGTMIKEL 280 (282)
T ss_dssp -HHHHHHHHHHHHHTTCSCEEEEETTSTTHHHHHHSSSSCSSEEECCC
T ss_pred -HHHHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHhCCCCceEEEEeC
Confidence 99999999999999999999999999999999999999999999865
|
| >d2ap9a1 c.73.1.2 (A:6-296) N-acetyl-l-glutamate kinase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=3.1e-51 Score=419.90 Aligned_cols=278 Identities=27% Similarity=0.390 Sum_probs=250.5
Q ss_pred CChhHHHHHHHHhhhHHHhhcCCeEEEEeCCccCCCCC-hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccc
Q 007903 78 VEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKY 156 (585)
Q Consensus 78 ~~~~~~~~~~r~a~~yi~~~r~k~iVIKlGGs~l~~~~-l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~ 156 (585)
+....++++||||+|||++||+|+||||+||+++++++ ++++++||+.|++.|+++||||||++++++.+.++++++++
T Consensus 4 ~~~~~~~~~l~~a~pYi~~~r~ktiVIKlGGsvl~~~~~~~~l~~dia~L~~~G~~vVlVhGg~~~i~~~l~~~~~~~~~ 83 (291)
T d2ap9a1 4 LPTHIKAQVLAEALPWLKQLHGKVVVVKYGGNAMTDDTLRRAFAADMAFLRNCGIHPVVVHGGGPQITAMLRRLGIEGDF 83 (291)
T ss_dssp SCHHHHHHHHHHHHHHHHHHTTCEEEEEECTHHHHSHHHHHHHHHHHHHHHTTTCEEEEEECCSHHHHHHHHHHTCCCCC
T ss_pred CChhhHHHHHHHHhHHHHHhCCCEEEEEECcHHhcCHHHHHHHHHHHHHHHHCCCEEEEEeCCccccchhHHHcCCCccc
Confidence 45678999999999999999999999999999999877 78999999999999999999999999999999999999999
Q ss_pred cCCccCCCHHHHHHH-HHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccc---cccccCcc
Q 007903 157 LGRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGV---VDGVDYGA 232 (585)
Q Consensus 157 ~~g~rvt~~~~l~~~-~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~---~~g~d~g~ 232 (585)
.++.|+|++++++.+ ++..+..+..+.+.+ ..+|+. ++++.+.+.++..+.+... .++.|+++
T Consensus 84 ~~~~r~t~~~~~~~v~~~~~~~~~~~~~~~~---------~~~g~~----~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 150 (291)
T d2ap9a1 84 KGGFRVTTPEVLDVARMVLFGQVGRELVNLI---------NAHGPY----AVGITGEDAQLFTAVRRSVTVDGVATDIGL 150 (291)
T ss_dssp SSSSCCBCHHHHHHHHHHHHHTHHHHHHHHH---------TTSSSC----EEEEETTGGGCEEEEECCBCSSSCCBCCBS
T ss_pred ccccccCcHHHHHHHHHhhhhHHHHHHHHHH---------HhcCCc----cccchhhhccccccccccccccccccccee
Confidence 999999999999987 567778888887764 556765 7888898988888766542 35678999
Q ss_pred eeeEEEecHHHHHHHHcCCCeEEEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccCC----CCccccccc
Q 007903 233 TGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDE----SGHLIRFLT 308 (585)
Q Consensus 233 ~G~v~~v~~~~I~~lL~~G~IPVi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~~----~~~lI~~it 308 (585)
+|+++.++.+.|+.+|+.|.|||++|++++.+|+.+|+|+|.+|+++|.+|+||+||||||+||+.. ..+++++++
T Consensus 151 ~G~v~~v~~~~I~~ll~~g~ipvi~~~~~~~~g~~~n~d~D~lAa~lA~~l~AdkLI~LTdv~Gv~~~~~~~~~~~~~~~ 230 (291)
T d2ap9a1 151 VGDVDQVNTAAMLDLVAAGRIPVVSTLAPDADGVVHNINADTAAAAVAEALGAEKLLMLTDIDGLYTRWPDRDSLVSEID 230 (291)
T ss_dssp EEEEEEECHHHHHHHHHTTCEEEEESEEECTTCCEEEECHHHHHHHHHHHTTCSEEEEEESSSSEETTTTCTTCEESEEE
T ss_pred ecccccchHHHHHHHHhcCCCcccCccccCCccccccccHHHHHHHHHHhcCCcEEEEeeccCcccccccccccccccCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999832 356788888
Q ss_pred HHHHHHHHHhhchhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCccccccccc
Q 007903 309 LQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAI 388 (585)
Q Consensus 309 ~~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~ 388 (585)
..|+++++.. + +| |
T Consensus 231 ~~~~~~~~~~-------------------------------~------------------------~g-G---------- 244 (291)
T d2ap9a1 231 TGTLAQLLPT-------------------------------L------------------------EL-G---------- 244 (291)
T ss_dssp HHHHHHHGGG-------------------------------S------------------------CT-T----------
T ss_pred HHHHHHHHhh-------------------------------h------------------------hC-c----------
Confidence 8888887532 1 24 5
Q ss_pred ccccccccccCcHHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeecc
Q 007903 389 GGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (585)
Q Consensus 389 ~~~~~~~~~~~m~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~~ 445 (585)
|.+||++|.+||+.||+||||+||+.+++||.|||+++|+||+|.+
T Consensus 245 -----------M~~Kl~aA~~a~~~Gv~rv~Ii~g~~~~~ll~eLft~~g~GT~I~r 290 (291)
T d2ap9a1 245 -----------MVPKVEACLRAVIGGVPSAHIIDGRVTHCVLVELFTDAGTGTKVVR 290 (291)
T ss_dssp -----------THHHHHHHHHHHHHTCSEEEEEETTSTTHHHHHHHSCCCCSEEEEC
T ss_pred -----------hHHHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHhcCCCCceEEec
Confidence 8999999999999999999999999999999999999999999975
|
| >d1e19a_ c.73.1.1 (A:) Carbamate kinase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: Carbamate kinase domain: Carbamate kinase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=100.00 E-value=2.7e-37 Score=318.88 Aligned_cols=259 Identities=17% Similarity=0.118 Sum_probs=203.0
Q ss_pred CCeEEEEeCCccCCCCC-----------hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHH
Q 007903 99 GGTFVVIISGEIVSSPY-----------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSES 167 (585)
Q Consensus 99 ~k~iVIKlGGs~l~~~~-----------l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rvt~~~~ 167 (585)
||+||||+||++|+++. ++++++||+.|++.|+++|||||||||++.+++++++++.+..+.|+|+...
T Consensus 1 ~KrIVIKiGgs~l~~~~~~~~~~~~~~~l~~~~~~Ia~L~~~G~~vVlVhGGgpqi~~~l~~~~~~~~~~~~~~~~~~~~ 80 (313)
T d1e19a_ 1 GKRVVIALGGNALQQRGQKGSYEEMMDNVRKTARQIAEIIARGYEVVITHGNGPQVGSLLLHMDAGQATYGIPAQPMDVA 80 (313)
T ss_dssp CCEEEEECCGGGTCCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHH
T ss_pred CCEEEEEeChHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCCccccCCCcccccHHH
Confidence 79999999999999863 4678999999999999999999999999999999999999999999999998
Q ss_pred HHHH-HHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcce----eEEee-----ecCcceeeeeec------------cc-
Q 007903 168 LAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWH----EVGVS-----VASGNFLAAKRK------------GV- 224 (585)
Q Consensus 168 l~~~-~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~----av~l~-----~~dg~~~~a~~~------------g~- 224 (585)
+..+ +...+.++..+.+.+ ..++++.... +..+. ..|+....++.. +.
T Consensus 81 ~~~~~~~~~~~~~~~l~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 151 (313)
T d1e19a_ 81 GAMSQGWIGYMIQQALKNEL---------RKRGMEKKVVTIITQTIVDKNDPAFQNPTKPVGPFYDEETAKRLAREKGWI 151 (313)
T ss_dssp HHHHHHHHHHHHHHHHHHHH---------HHTTCCCCEEEBCCEEEECTTCGGGTSCCEEEEEEECHHHHHHHHHHHCCE
T ss_pred HHHHHHHHHHHHHHHHHHHH---------HhccccHHhhHHHHhhhhhhHHHHhhccCceeehhhhhhHHHHHHhhcCce
Confidence 8876 556666776676643 5566654322 22222 223333333221 00
Q ss_pred -------cccccCcceeeEEEecHHHHHHHHcCCCeEEEcCCccC--------CCCceeeeChHHHHHHHHHHcCCCEEE
Q 007903 225 -------VDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYS--------SSGEVLNCNTYEVATACALAIEADKLI 289 (585)
Q Consensus 225 -------~~g~d~g~~G~v~~v~~~~I~~lL~~G~IPVi~~v~~~--------~~G~~~nid~D~lAa~lA~~L~AdkLI 289 (585)
....+.+.++.++.++.+.|..+++++++|++++.++. .+|+++|+|+|++|+++|.+|+||+||
T Consensus 152 ~~~~~~~~~~~~v~~~~~~~~v~~~~i~~~~~~~~i~vl~~~~~~~v~~~~~~~~G~~~ninaD~lAa~vA~~l~Ad~LI 231 (313)
T d1e19a_ 152 VKEDSGRGWRRVVPSPDPKGHVEAETIKKLVERGVIVIASGGGGVPVILEDGEIKGVEAVIDKDLAGEKLAEEVNADIFM 231 (313)
T ss_dssp EEECTTSCEEEEECCCCEEEETTHHHHHHHHHTTCEEECSGGGCEEEEEETTEEEECCCCCCHHHHHHHHHHHTTCSEEE
T ss_pred eeeccCccceeeccCCCceeEecccceeeccccchhhhhccCCCCCccccCCCcCceEEecchhHHHHHHHHHHHHHHHH
Confidence 01122344566788999999999999999999875442 368999999999999999999999999
Q ss_pred Eeeccccc-----CCCCcccccccHHHHHHHHHhhchhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchh
Q 007903 290 CIIDGPIL-----DESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRI 364 (585)
Q Consensus 290 ilTDV~gl-----~~~~~lI~~it~~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (585)
|||||||+ ++++++|++++.+|+++++..+.
T Consensus 232 lLTdv~Gv~~~~~~~~~~~i~~l~~~e~~~li~~g~-------------------------------------------- 267 (313)
T d1e19a_ 232 ILTDVNGAALYYGTEKEQWLREVKVEELRKYYEEGH-------------------------------------------- 267 (313)
T ss_dssp EEESSSSCEETTTSTTCEECCEEEHHHHHHHHHTTC--------------------------------------------
T ss_pred hccCCcceeccCCCcccceeeeCCHHHHHHHhhCCC--------------------------------------------
Confidence 99999998 35689999999999999986432
Q ss_pred ccccCCccccCCCCCcccccccccccccccccccCcHHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeec
Q 007903 365 ATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (585)
Q Consensus 365 ~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~ 444 (585)
+++| | |.|||+||..|++.|+++|+|.++ +. +.+++.+ +.||+|.
T Consensus 268 --------~~~G-G---------------------M~~Kv~aA~~a~~~Gv~~v~I~~~---~~-i~~~l~g-~~GT~i~ 312 (313)
T d1e19a_ 268 --------FKAG-S---------------------MGPKVLAAIRFIEWGGERAIIAHL---EK-AVEALEG-KTGTQVL 312 (313)
T ss_dssp --------SCTT-T---------------------HHHHHHHHHHHHHHTCSEEEEEEG---GG-HHHHHTT-SSSEEEE
T ss_pred --------cccC-C---------------------hHHHHHHHHHHHHhCCCEEEECCh---HH-HHHHHCC-CCCCEEc
Confidence 2346 5 999999999999999999999763 33 5677765 5899997
Q ss_pred c
Q 007903 445 S 445 (585)
Q Consensus 445 ~ 445 (585)
|
T Consensus 313 P 313 (313)
T d1e19a_ 313 P 313 (313)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >d1b7ba_ c.73.1.1 (A:) Carbamate kinase {Enterococcus faecium [TaxId: 1352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: Carbamate kinase domain: Carbamate kinase species: Enterococcus faecium [TaxId: 1352]
Probab=100.00 E-value=3.5e-36 Score=309.19 Aligned_cols=259 Identities=14% Similarity=0.115 Sum_probs=190.8
Q ss_pred CCeEEEEeCCccCCCCC---------hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHH
Q 007903 99 GGTFVVIISGEIVSSPY---------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLA 169 (585)
Q Consensus 99 ~k~iVIKlGGs~l~~~~---------l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rvt~~~~l~ 169 (585)
|||||||+||++|++++ +++++++|+.|++.|+++|||||||||++..+.+++..+.+..+.|.++...+.
T Consensus 1 gk~iVIK~GGsal~~~~~~~~~~~~~l~~~~~~Ia~L~~~G~~vViVHGGgpqi~~~l~~~~~~~~~~~~~~~~~~~~~~ 80 (307)
T d1b7ba_ 1 GKKMVVALGGNAILSNDASAHAQQQALVQTSAYLVHLIKQGHRLIVSHGNGPQVGNLLLQQQAADSEKNPAMPLDTCVAM 80 (307)
T ss_dssp CCEEEEEECHHHHTSSCCSHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHHHHHTCSSSSCCCCHHHHHHH
T ss_pred CCEEEEEEChhhhCCCCCCchHHHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhcCCCCcccccccccchHHHH
Confidence 79999999999998753 678999999999999999999999999998888887766666655655555554
Q ss_pred HHHHHHhHHHHHHHHhhCCCCCchhHHhcCCCC--------------------cceeEEeeecCcceeeeeeccc-----
Q 007903 170 AAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSS--------------------RWHEVGVSVASGNFLAAKRKGV----- 224 (585)
Q Consensus 170 ~~~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~--------------------~~~av~l~~~dg~~~~a~~~g~----- 224 (585)
......+.+...+.... ....++. +..++++...++....+...+.
T Consensus 81 ~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 151 (307)
T d1b7ba_ 81 TQGSIGYWLSNALNQEL---------NKAGIKKQVATVLTQVVVDPADEAFKNPTKPIGPFLTEAEAKEAMQAGAIFKED 151 (307)
T ss_dssp HHHHHHHHHHHHHHHHH---------HHTTCCCEEEEBCCEEEECTTCGGGTSCCEEEEEEECHHHHHHHHTTTCCEEEE
T ss_pred HHHHHHHHHhhhhHHHH---------hhcccchhhhhhhhhhhHHHHHHHHHccCcceeeecccchHHHHHHhhcceecc
Confidence 43323333322222211 1111111 1123444444433332222110
Q ss_pred ---cccccCcceeeEEEecHHHHHHHHcCCCeEEEcCC------ccCCCCceeeeChHHHHHHHHHHcCCCEEEEeeccc
Q 007903 225 ---VDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL------GYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP 295 (585)
Q Consensus 225 ---~~g~d~g~~G~v~~v~~~~I~~lL~~G~IPVi~~v------~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~ 295 (585)
....+.++.+.++.++.+.+..+++.+.||+++++ +.+.+|+++|+|+|++|+++|.+|+||+||||||||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~ninaD~lAa~iA~~l~Ad~Li~lTdv~ 231 (307)
T d1b7ba_ 152 AGRGWRKVVPSPKPIDIHEAETINTLIKNDIITISCGGGGIPVVGQELKGVEAVIDKDFASEKLAELVDADALVILTGVD 231 (307)
T ss_dssp TTTEEEEEECCCCEEEETTHHHHHHHHHTTEEEECSGGGCEEEETTTTEECSCCCCHHHHHHHHHHHHTCSEEEEECSSS
T ss_pred ccccceeecCcCceeeeechhhhhhhhhcCceeeccCCccccccccCCCCcEEecchhHHHHHHHHHhhhhheeeccccC
Confidence 01122344566778899999999999999998753 566789999999999999999999999999999999
Q ss_pred ccC-----CCCcccccccHHHHHHHHHhhchhhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCC
Q 007903 296 ILD-----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNG 370 (585)
Q Consensus 296 gl~-----~~~~lI~~it~~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (585)
|++ +++++++.++.+|++++++++.
T Consensus 232 Gv~~~~~~~~~~~i~~l~~~e~~~l~~~g~-------------------------------------------------- 261 (307)
T d1b7ba_ 232 YVCINYGKPDEKQLTNVTVAELEEYKQAGH-------------------------------------------------- 261 (307)
T ss_dssp SCEETTTSTTCEECSEEEHHHHHHHHHTTC--------------------------------------------------
T ss_pred ceeeCCCcccccccccCCHHHHHHHHHCCC--------------------------------------------------
Confidence 982 4578899999999999986532
Q ss_pred ccccCCCCCcccccccccccccccccccCcHHHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceee
Q 007903 371 VGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 443 (585)
Q Consensus 371 ~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i 443 (585)
+.+| | |+|||+||..|+++|++++||+++. ..|.|+|+++++||+|
T Consensus 262 --~~~G-G---------------------M~pKl~aA~~al~~Gv~~~~ii~~~---~~l~~l~~~~~~GT~I 307 (307)
T d1b7ba_ 262 --FAPG-S---------------------MLPKIEAAIQFVESQPNKQAIITSL---ENLGSMSGDEIVGTVV 307 (307)
T ss_dssp --SCTT-T---------------------HHHHHHHHHHHHTTSTTCEEEEECH---HHHTTCSSCSCEEECC
T ss_pred --cccC-C---------------------hHHHHHHHHHHHHcCCCeEEEECCH---HHHHHHHcCCCCCCCC
Confidence 2246 5 9999999999999999999999763 2478999999999986
|
| >d1gs5a_ c.73.1.2 (A:) N-acetyl-l-glutamate kinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.7e-33 Score=278.97 Aligned_cols=254 Identities=22% Similarity=0.285 Sum_probs=214.3
Q ss_pred cCCeEEEEeCCccCCCCC-hHHHHHHHHHHHHCCCe-EEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHH-HHH
Q 007903 98 RGGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIR-FVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEA 174 (585)
Q Consensus 98 r~k~iVIKlGGs~l~~~~-l~~l~~~Ia~L~~~G~~-vVlVhGgg~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~-~~~ 174 (585)
++++||||+||++|++++ +++++++|+.|++.|++ +|||||+|+|++.+++++++++++..+.|+++..++..+ ++.
T Consensus 1 Mm~~IVIKiGgs~lt~~~~~~~~~~~ia~l~~~g~~~vvvvhG~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 80 (258)
T d1gs5a_ 1 MMNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGAL 80 (258)
T ss_dssp CCCCEEEEECGGGGGCHHHHHHHHHHHHHHHTTCCSCEEEEECCHHHHHHHHHHHTCCCCEETTEECBCHHHHHHHHHHH
T ss_pred CCCCEEEEECchhccCHHHHHHHHHHHHHHHHCCCceEEEECCCchhhhcchhhhccccccccccchhhHHHHHHHHHHH
Confidence 368999999999999976 89999999999999987 899999999999999999999999999999999999886 567
Q ss_pred HhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHHcCCCeE
Q 007903 175 AGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLV 254 (585)
Q Consensus 175 ~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL~~G~IP 254 (585)
.++++..++..+ ...|.+ +..+...+.++..... ...++.+++++..++...+..+++.+.+|
T Consensus 81 ~~~~~~~~~~~~---------~~~~~~----~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~~~~i~ 143 (258)
T d1gs5a_ 81 AGTANKTLLAWA---------KKHQIA----AVGLFLGDGDSVKVTQ----LDEELGHVGLAQPGSPKLINSLLENGYLP 143 (258)
T ss_dssp HTHHHHHHHHHH---------HHTTCC----EEEECTTGGGCEEEEE----CCGGGBSBEEEEECCCHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHH---------hccCcc----cccccccccccccccc----ccccccccccccccccchHHHHHhccccc
Confidence 888887777754 566765 5566666655554432 23577888999999999999999999999
Q ss_pred EEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeeccccc-CCCCcccccccHHHHHHHHHhhchhhhHHHHHHhhh
Q 007903 255 ILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPIL-DESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAV 333 (585)
Q Consensus 255 Vi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl-~~~~~lI~~it~~e~~~li~~~~~~~~~~~~~~~~~ 333 (585)
++.+++.+.+++++++++|.+|+.+|..++|+++ ++||++++ +.+...++.++..+...+...+
T Consensus 144 v~~~~~~~~~~~~~~~~~~~~a~~~a~~l~a~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 208 (258)
T d1gs5a_ 144 VVSSIGVTDEGQLMNVNADQAATALAATLGADLI-LLSDVSGILDGKGQRIAEMTAAKAEQLIEQG-------------- 208 (258)
T ss_dssp EECSEEECTTSCEEECCHHHHHHHHHHHHTCEEE-EEESSSSCBCTTSCBCCEECHHHHHHHHHTT--------------
T ss_pred cccccccccCCcEEEechhhhhhhHHHHHHhhhh-hhcccccccccccccccccchHHHHHHHhCC--------------
Confidence 9999999999999999999999999999999975 55666654 5677788888887766654321
Q ss_pred hcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccCcHHHHHHHHHHHHc
Q 007903 334 AEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRR 413 (585)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~~kl~aa~~a~~~ 413 (585)
+.+| | |.+||+||..|++.
T Consensus 209 ---------------------------------------~~tG-G---------------------M~~Kl~aA~~a~~~ 227 (258)
T d1gs5a_ 209 ---------------------------------------IITD-G---------------------MIVKVNAALDAART 227 (258)
T ss_dssp ---------------------------------------CSCT-H---------------------HHHHHHHHHHHHHH
T ss_pred ---------------------------------------cccc-h---------------------HHHHHHHHHHHHHc
Confidence 1235 5 99999999999999
Q ss_pred CCCeEEEecCccchhhHHHHHhcCCCceeecc
Q 007903 414 GVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (585)
Q Consensus 414 Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~~ 445 (585)
|+++|||+||+.++. |.++|++++.||+|.+
T Consensus 228 Gv~~v~I~~g~~~~~-L~~l~~g~~~GT~i~a 258 (258)
T d1gs5a_ 228 LGRPVDIASWRHAEQ-LPALFNGMPMGTRILA 258 (258)
T ss_dssp HTSCEEEEESSCGGG-HHHHHTTCCSSEEECC
T ss_pred CCCEEEEEeCCCchH-HHHHhcCCCCceEEeC
Confidence 999999999998875 7899999999999853
|
| >d2akoa1 c.73.1.3 (A:2-251) Glutamate 5-kinase {Campylobacter jejuni [TaxId: 197]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: PyrH-like domain: Glutamate 5-kinase species: Campylobacter jejuni [TaxId: 197]
Probab=99.94 E-value=1.6e-26 Score=230.35 Aligned_cols=233 Identities=15% Similarity=0.153 Sum_probs=160.9
Q ss_pred CeEEEEeCCccCCCCC------hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHHHH
Q 007903 100 GTFVVIISGEIVSSPY------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAME 173 (585)
Q Consensus 100 k~iVIKlGGs~l~~~~------l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~~~ 173 (585)
|+||||+||++|++++ +.+++++|+.|.+ ++++|||||||. ......+++..+ .....++ .+
T Consensus 1 krIViKlGGs~it~k~~~~~~~l~~~~~~I~~l~~-~~~~vIV~gGa~--~~G~~~~~~~~~--------~~~~~~~-~~ 68 (250)
T d2akoa1 1 KRIVVKVGSHVISEENTLSFERLKNLVAFLAKLME-KYEVILVTSAAI--SAGHTKLDIDRK--------NLINKQV-LA 68 (250)
T ss_dssp CEEEEEECHHHHBCSSSBCHHHHHHHHHHHHHHHH-HSEEEEEECCHH--HHHHHHCCCCSS--------SHHHHHH-HH
T ss_pred CEEEEEeccCeeeCCCCcCHHHHHHHHHHHHHHHc-CCeEEEEEcCcc--cccccccccccc--------hhhhhhh-hh
Confidence 6899999999999864 5789999999986 899999988863 333456666532 1222222 23
Q ss_pred HHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHHcCCCe
Q 007903 174 AAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCL 253 (585)
Q Consensus 174 ~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL~~G~I 253 (585)
+.|+.. ++..+. ..|..+|+. ++.+......+.. ........+.+..+++.+.+
T Consensus 69 ~~g~~~--~~~~~~-----~~l~~~~~~----~~~~l~~~~~~~~---------------~~~~~~~~~~~~~~l~~~~i 122 (250)
T d2akoa1 69 AIGQPF--LISVYN-----ELLAKFNKL----GGQILLTGKDFDS---------------RKATKHAKNAIDMMINLGIL 122 (250)
T ss_dssp HHHHHH--HHHHHH-----HHHGGGTCC----EEEEEECTGGGGC---------------HHHHHHHHHHHHHHHHTTCE
T ss_pred cccchh--HHHHHH-----HHhhhcccc----cccccccccchhh---------------hhhhhhhhHHHHHHHHhCcc
Confidence 445433 333332 156777876 3322222211111 11122346889999999999
Q ss_pred EEEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC-------CCCcccccccH--HHHHHHHHhhchhhh
Q 007903 254 VILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTL--QEADSLIRQRVKQSE 324 (585)
Q Consensus 254 PVi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~-------~~~~lI~~it~--~e~~~li~~~~~~~~ 324 (585)
||+++......++..++++|.+|+.+|..++|++|+++|||||++ +++++|++++. +++.++.
T Consensus 123 pv~~~~~~~~~~~~~~~~~D~~A~~lA~~~~a~~li~~tdVdGVyd~dP~~~~~Ak~i~~It~~~~~~~~~~-------- 194 (250)
T d2akoa1 123 PIINENDATAIEEIVFGDNDSLSAYATHFFDADLLVILSDIDGFYDKNPSEFSDAKRLEKITHIKEEWLQAT-------- 194 (250)
T ss_dssp EEEEECTTTCCHHHHBTTTHHHHHHHHHHTTCSEEEEEESSCSCBSSCTTTCTTCCBCCEESCCCGGGC-----------
T ss_pred cccccCccccccccccccchhhHHHHHHhcccceeeeccCCCceeeCCCcccccccchhhccccchHHhhhh--------
Confidence 999987666666788999999999999999999999999999983 46899999984 2221111
Q ss_pred HHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccCcHHHH
Q 007903 325 IAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSEL 404 (585)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~~kl 404 (585)
+..++.++|| | |.+||
T Consensus 195 ------------------------------------------~~~~s~~~tG-G---------------------M~~Kl 210 (250)
T d2akoa1 195 ------------------------------------------IKTGSEHGTG-G---------------------IVTKL 210 (250)
T ss_dssp ------------------------------------------------CBSC-H---------------------HHHHH
T ss_pred ------------------------------------------cccCCCCCCC-c---------------------hHHHH
Confidence 1123344567 6 99999
Q ss_pred HHHHHHHHcCCCeEEEecCccchhhHHHHHhcC-CCceee
Q 007903 405 AAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRD-GMGTMV 443 (585)
Q Consensus 405 ~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~-~~GT~i 443 (585)
+||..+.+.|++ |+|+||+.++.|...+..++ ..||.|
T Consensus 211 ~aa~~~~~~gi~-v~I~nG~~~~~l~~~l~~~~~~~GTv~ 249 (250)
T d2akoa1 211 KAAKFLLEHNKK-MFLASGFDLSVAKTFLLEDKQIGGTLF 249 (250)
T ss_dssp HHHHHHHHTTCE-EEEEESSSCHHHHHHHHSCCCCSSEEE
T ss_pred HHHHHHHHCCCC-EEEecCCCccHHHHHHhCCCCCCceEe
Confidence 999999999996 99999999999666665554 369987
|
| >d2brxa1 c.73.1.3 (A:1-225) Uridylate kinase PyrH {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: PyrH-like domain: Uridylate kinase PyrH species: Pyrococcus furiosus [TaxId: 2261]
Probab=99.93 E-value=7e-25 Score=215.07 Aligned_cols=212 Identities=14% Similarity=0.125 Sum_probs=150.8
Q ss_pred eEEEEeCCccCCCCC-----hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHHHHHH
Q 007903 101 TFVVIISGEIVSSPY-----LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAA 175 (585)
Q Consensus 101 ~iVIKlGGs~l~~~~-----l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rvt~~~~l~~~~~~~ 175 (585)
+||||+||++|++++ +..++++|+.+.+ |.++|||||||.+.+...+..... . .+....+......
T Consensus 2 rIViKiGGs~l~~~~~~~~~i~~l~~~I~~l~~-~~~~viV~ggG~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~ 72 (225)
T d2brxa1 2 RIVFDIGGSVLVPENPDIDFIKEIAYQLTKVSE-DHEVAVVVGGGKLARKYIEVAEKF-------N-SSETFKDFIGIQI 72 (225)
T ss_dssp EEEEEECHHHHCSSSCCHHHHHHHHHHHHHHHH-HSEEEEEECCHHHHHHHHHHHHTT-------T-CCHHHHHHHHHHH
T ss_pred eEEEEeehhhcCCCCCCHHHHHHHHHHHHHHHc-CCcEEEEECccHHHHHHHHhhhhc-------c-hhhHHHHHhhhhH
Confidence 689999999998765 6888999999876 789999999998877654322110 0 1222223323334
Q ss_pred hHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHHcCCCeEE
Q 007903 176 GGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVI 255 (585)
Q Consensus 176 G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL~~G~IPV 255 (585)
.++|..+... .|...|++. . .-+.....++++.+.|||
T Consensus 73 ~~~~~~~~~~--------~l~~~~~~~---------------~-------------------~~~~~~~~~~l~~~~ipv 110 (225)
T d2brxa1 73 TRANAMLLIA--------ALREKAYPV---------------V-------------------VEDFWEAWKAVQLKKIPV 110 (225)
T ss_dssp HHHHHHHHHH--------HHGGGBCSS---------------C-------------------BCSHHHHHHHHHTTCBCE
T ss_pred HHHHHHHHHH--------HHHhhhccc---------------c-------------------cccHHHHHHHHHhccccc
Confidence 4455444332 345555541 0 013334556889999999
Q ss_pred EcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC-------CCCcccccccHHHHHHHHHhhchhhhHHHH
Q 007903 256 LSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIAAN 328 (585)
Q Consensus 256 i~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~-------~~~~lI~~it~~e~~~li~~~~~~~~~~~~ 328 (585)
++... .+.++|++|+.+|.+|+||+|+++|||||++ +++++|++++.+|+.++...+.
T Consensus 111 ~~~~~-------~~~~~D~lAa~lA~~l~Ad~lii~TDVdGVyt~dP~~~~~Ak~i~~i~~~e~~~~~~~~~-------- 175 (225)
T d2brxa1 111 MGGTH-------PGHTTDAVAALLAEFLKADLLVVITNVDGVYTADPKKDPTAKKIKKMKPEELLEIVGKGI-------- 175 (225)
T ss_dssp ECCCS-------TTCCHHHHHHHHHHHTTCSEEEEECSSSSCBSSCTTTCTTCCBCSEECHHHHHHHHHC----------
T ss_pred ccCCC-------CCcchhHHHHHHHHHhCchhhhhhhhhhhhhhcccccccccccceEEecchHHHHhccCc--------
Confidence 97521 1347899999999999999999999999983 5789999999998887765432
Q ss_pred HHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccCcHHHHHHHH
Q 007903 329 YVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAA 408 (585)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~~kl~aa~ 408 (585)
+..++| | |.+|+ ||.
T Consensus 176 ------------------------------------------~~~g~g-g---------------------~~~k~-Aa~ 190 (225)
T d2brxa1 176 ------------------------------------------EKAGSS-S---------------------VIDPL-AAK 190 (225)
T ss_dssp -------------------------------------------------C---------------------CSCHH-HHH
T ss_pred ------------------------------------------cccCCC-C---------------------cccHH-HHH
Confidence 112244 5 77888 788
Q ss_pred HHHHcCCCeEEEecCccchhhHHHHHhcCCCceeecc
Q 007903 409 FVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (585)
Q Consensus 409 ~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~~ 445 (585)
.|.+.|++ ++|+||..++. |.+++.++..||+|.|
T Consensus 191 ~a~~~gi~-v~I~ng~~~~~-l~~~l~ge~~GT~i~P 225 (225)
T d2brxa1 191 IIARSGIK-TIVIGKEDAKD-LFRVIKGDHNGTTIEP 225 (225)
T ss_dssp HHHHHTCC-EEEECHHHHTC-HHHHHTTCSSSEEECC
T ss_pred HHHHCCCc-EEEEeCCCcch-HHHHHCCCCCCcEecC
Confidence 89999998 99999999998 5689999999999965
|
| >d2ij9a1 c.73.1.3 (A:1-219) Uridylate kinase PyrH {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: PyrH-like domain: Uridylate kinase PyrH species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.90 E-value=8.5e-23 Score=199.13 Aligned_cols=207 Identities=18% Similarity=0.155 Sum_probs=145.2
Q ss_pred CeEEEEeCCccCCCCC--hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHH---HcCCcccccCCccCCCHHHHHHHHHH
Q 007903 100 GTFVVIISGEIVSSPY--LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLS---ERGHEAKYLGRYRITDSESLAAAMEA 174 (585)
Q Consensus 100 k~iVIKlGGs~l~~~~--l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~---~~g~~~~~~~g~rvt~~~~l~~~~~~ 174 (585)
.+||||+|||+|+++. +..++++|+.+++.+ ++|||||||.+.+...+ .++. +....+.....
T Consensus 1 MrIViKiGgs~l~~~~~~i~~la~~i~~l~~~~-~~vIVvsgG~~ar~~~~~~~~~~~-----------~~~~~~~~~~~ 68 (219)
T d2ij9a1 1 MKVVLSLGGSVLSNESEKIREFAKTIESVAQQN-QVFVVVGGGKLAREYIKSARELGA-----------SETFCDYIGIA 68 (219)
T ss_dssp CEEEEEECSSTTTTCHHHHHHHHHHHHHHHHHS-EEEEEECCHHHHHHHHHHHHHTTC-----------CHHHHHHHHHH
T ss_pred CEEEEEecccccCCcHHHHHHHHHHHHHHHcCC-cEEEEECCCccccchhhhhhhcCc-----------cHHHHHHHHHH
Confidence 3799999999998754 899999999998754 89999999987655433 2222 22233322222
Q ss_pred HhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHHcCCCeE
Q 007903 175 AGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLV 254 (585)
Q Consensus 175 ~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL~~G~IP 254 (585)
....|..+.+. .|...+.. ...+....+++++.+.+|
T Consensus 69 ~~~~~~~~~~~--------~l~~~~~~-----------------------------------~~~~~~~~~~l~~~~~v~ 105 (219)
T d2ij9a1 69 ATRLNAMLLIS--------AIPSAAKK-----------------------------------VPVDFMEAEELSKLYRVV 105 (219)
T ss_dssp HHHHHHHHHHH--------HCTTBCSS-----------------------------------CCSSHHHHHHHHTTCSEE
T ss_pred HHHhhHHHHHH--------Hhhhccch-----------------------------------hhHHHHHHHHHhccCCce
Confidence 22333322221 12222221 122455677899999999
Q ss_pred EEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC-------CCCcccccccHHHHHHHHHhhchhhhHHH
Q 007903 255 ILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIAA 327 (585)
Q Consensus 255 Vi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~-------~~~~lI~~it~~e~~~li~~~~~~~~~~~ 327 (585)
|+.. +.-+.++|.+|+.+|..++||+||++|||||++ |++++|++++.+|+.++...+
T Consensus 106 v~~~-------~~~~~stD~laa~vA~~l~Ad~liilTDVDGvYt~dP~~~~~A~~i~~is~~e~~~~~~~~-------- 170 (219)
T d2ij9a1 106 VMGG-------TFPGHTTDATAALLAEFIKADVFINATNVDGVYSADPKSDTSAVKYDRLSPQQLVEIVSRS-------- 170 (219)
T ss_dssp EECC-------CSSSSCTHHHHHHHHHHTTCSEEEEEESSSSCBCSSCSSSSSCCBCSEECHHHHHHHTCC---------
T ss_pred EECC-------CCCCCcccHHHHHHHHHcCchHhhhccCcccccccccccCcccccccccCHHHHHHHhhcc--------
Confidence 8764 223457899999999999999999999999983 468999999998876653211
Q ss_pred HHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccCcHHHHHHH
Q 007903 328 NYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAA 407 (585)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~~kl~aa 407 (585)
+..+.| | |..|++||
T Consensus 171 -------------------------------------------~~~~~g-g---------------------~~~k~~Aa 185 (219)
T d2ij9a1 171 -------------------------------------------SAKAGT-N---------------------VVIDLLAA 185 (219)
T ss_dssp -----------------------------------------------CC-C---------------------CCSCHHHH
T ss_pred -------------------------------------------CccCCC-C---------------------CcchHHHH
Confidence 111223 4 77899999
Q ss_pred HHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeec
Q 007903 408 AFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (585)
Q Consensus 408 ~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~ 444 (585)
..|.+.|++ ++|++|+ ++. +.+++.++.+||.|+
T Consensus 186 ~~a~~~gi~-~~I~~g~-~~n-i~~~l~Ge~vGT~Is 219 (219)
T d2ij9a1 186 KIIERSKIK-TYVILGT-PEN-IMKAVKGEAVGTVIA 219 (219)
T ss_dssp HHHHHHTCC-EEEEECC-HHH-HHHHHTTCCCSEEEC
T ss_pred HHHHHcCCc-EEEecCC-CcH-HHHHHCCCCCceEeC
Confidence 999999998 8999996 666 567889999999984
|
| >d1ybda1 c.73.1.3 (A:6-241) Uridylate kinase PyrH {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: PyrH-like domain: Uridylate kinase PyrH species: Neisseria meningitidis [TaxId: 487]
Probab=99.85 E-value=2.3e-19 Score=175.21 Aligned_cols=218 Identities=15% Similarity=0.109 Sum_probs=147.8
Q ss_pred cCCeEEEEeCCccCCCCC--------hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHH
Q 007903 98 RGGTFVVIISGEIVSSPY--------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLA 169 (585)
Q Consensus 98 r~k~iVIKlGGs~l~~~~--------l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g~~~~~~~g~rvt~~~~l~ 169 (585)
+.|+|||||||++|++++ +.+++++|+.|++.|+++|+|+||+...+......... ......
T Consensus 3 k~krIViKiGgs~l~~~~~~~i~~~~i~~la~~I~~l~~~g~~vviVssG~~~~~~~~~~~~~~----------~~~~~~ 72 (236)
T d1ybda1 3 KYKRVLLKLSGESLMGSDPFGINHDTIVQTVGEIAEVVKMGVQVGIVVGGGNIFRGVSAQAGSM----------DRATAD 72 (236)
T ss_dssp SCSEEEEEECGGGGGTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHHHTTS----------CHHHHH
T ss_pred CCCEEEEEECcceecCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEecccccccccccccccc----------ccchhh
Confidence 458999999999998642 78999999999999999999999987766544333221 111222
Q ss_pred HHHHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHHc
Q 007903 170 AAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLD 249 (585)
Q Consensus 170 ~~~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL~ 249 (585)
.......+....+... .+...+.. ........ .. + .....+...+...++
T Consensus 73 ~~~~~~~~~~~~~~~~--------~~~~~~~~----~~~~~~~~---~~----------~-----~~~~~~~~~~~~~~~ 122 (236)
T d1ybda1 73 YMGMMATVMNALALKD--------AFETLGIK----ARVQSALS---MQ----------Q-----IAETYARPKAIQYLE 122 (236)
T ss_dssp HHHHHHHHHHHHHHHH--------HHHHTTCC----EEEEESSC---BS----------S-----SCEECCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH--------HHHhcCcc----hhhhhhhh---hh----------h-----hhhhHHHHHHHhhhc
Confidence 2222222222222221 23334433 22221111 00 0 012345677778888
Q ss_pred CCCeEEEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC-------CCCcccccccHHHHHHHHHhhchh
Q 007903 250 GGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQ 322 (585)
Q Consensus 250 ~G~IPVi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~-------~~~~lI~~it~~e~~~li~~~~~~ 322 (585)
.+.+|++.... +....|+|.+|+.+|..++||.|+++|||||++ +++++++.++.+|.. ..+
T Consensus 123 ~~~~~~~~~~~-----~~~~gdnD~laa~vA~~~~ad~liilTdVdGvy~~dP~~~~~a~~~~~~~~~e~~---~~g--- 191 (236)
T d1ybda1 123 EGKVVIFAAGT-----GNPFFTTDTAAALRGAEMNCDVMLKATNVDGVYTADPKKDPSATRYETITFDEAL---LKN--- 191 (236)
T ss_dssp TTCEEEEESTT-----SSTTCCHHHHHHHHHHHTTCSEEEEECSSSSCBSSCGGGCTTCCBCSEEEHHHHH---HTT---
T ss_pred cCceecccccc-----ccccccchHHHHHHHHHhCccceeeccCccchhhccccccccceeeccccHHHHH---hcC---
Confidence 99888875432 334679999999999999999999999999983 468888888866532 111
Q ss_pred hhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccCcHH
Q 007903 323 SEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLS 402 (585)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~~ 402 (585)
+| | |
T Consensus 192 ----------------------------------------------------~~-~---------------------m-- 195 (236)
T d1ybda1 192 ----------------------------------------------------LK-V---------------------M-- 195 (236)
T ss_dssp ----------------------------------------------------CC-S---------------------S--
T ss_pred ----------------------------------------------------ch-H---------------------H--
Confidence 13 4 5
Q ss_pred HHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeec
Q 007903 403 ELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (585)
Q Consensus 403 kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~ 444 (585)
|+.||..|.+.|++ ++|+||+.++. |.+++.++.+||+|.
T Consensus 196 ~~~Aa~~a~~~gi~-v~I~ng~~~~~-i~~~l~Ge~vGTlIh 235 (236)
T d1ybda1 196 DATAFALCRERKLN-IVVFGIAKEGS-LKRVITGEDEGTLVH 235 (236)
T ss_dssp CHHHHHHHHHTTCC-EEEECTTSTTH-HHHHHHTCSCSEEEE
T ss_pred HHHHHHHHHHCCCc-EEEEeCCCccH-HHHHHcCCCCCcEeC
Confidence 34489999999998 89999999998 677889999999984
|
| >d2a1fa1 c.73.1.3 (A:2-237) Uridylate kinase PyrH {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: PyrH-like domain: Uridylate kinase PyrH species: Haemophilus influenzae [TaxId: 727]
Probab=99.84 E-value=6.9e-20 Score=179.59 Aligned_cols=216 Identities=18% Similarity=0.132 Sum_probs=144.4
Q ss_pred CCeEEEEeCCccCCCCC--------hHHHHHHHHHHHHCCCeEEEEeCchHHHHH-HHHHcCCcccccCCccCCCHHHHH
Q 007903 99 GGTFVVIISGEIVSSPY--------LDPILKDIAFLHHLGIRFVLVPGTHVQIDK-LLSERGHEAKYLGRYRITDSESLA 169 (585)
Q Consensus 99 ~k~iVIKlGGs~l~~~~--------l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~-~l~~~g~~~~~~~g~rvt~~~~l~ 169 (585)
.|+||||+||++|++++ +++++++|+.|++.|+++++|.||+..... .+...+.+ .....
T Consensus 5 ~kRIViKiGgs~l~~~~~~~i~~~~i~~la~~I~~l~~~g~~vivVssg~~~~~~~~l~~~~~~-----------~~~~~ 73 (236)
T d2a1fa1 5 YKRILLKLSGEALQGEDGLGIDPAILDRMAVEIKELVEMGVEVSVVLGGGNLFRGAKLAKAGMN-----------RVVGD 73 (236)
T ss_dssp CSEEEEEECGGGGCCTTSSSCCHHHHHHHHHHHHHHHTTTCEEEEEECCTTTCCCHHHHHTTCC-----------HHHHH
T ss_pred CcEEEEEEccceecCCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEecccccchhhhhhhcCCC-----------chhhH
Confidence 48999999999998542 689999999999999999999998654332 23333222 11111
Q ss_pred HHHHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHHc
Q 007903 170 AAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLD 249 (585)
Q Consensus 170 ~~~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL~ 249 (585)
.........+..+.+.+ +...... ........ . ...........+..+++
T Consensus 74 ~~~~~~~~~~~~~~~~~--------~~~~~~~----~~~~~~~~---~---------------~~~~~~~~~~~~~~~~~ 123 (236)
T d2a1fa1 74 HMGMLATVMNGLAMRDS--------LFRADVN----AKLMSAFQ---L---------------NGICDTYNWSEAIKMLR 123 (236)
T ss_dssp HHHHHHHHHHHHHHHHH--------HHHTTCC----EEEEESSC---C---------------TTTSEECCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH--------HHhhccc----cchhhhhh---h---------------hhhHHHhhhhhhhhhhh
Confidence 11111122222222221 1222221 11111110 0 00112345667778889
Q ss_pred CCCeEEEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC-------CCCcccccccHHHHHHHHHhhchh
Q 007903 250 GGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQ 322 (585)
Q Consensus 250 ~G~IPVi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~-------~~~~lI~~it~~e~~~li~~~~~~ 322 (585)
.+.+|++.... +.-..|+|.+|+.+|.+++||.|+++|||||++ ++++++++++.+|+ +..
T Consensus 124 ~~~~~~~~~~~-----~~~~~dnD~laa~vA~~~~Ad~lii~TDVdGvyt~dP~~~~~A~~i~~i~~~e~---l~~---- 191 (236)
T d2a1fa1 124 EKRVVIFSAGT-----GNPFFTTDSTACLRGIEIEADVVLKATKVDGVYDCDPAKNPDAKLYKNLSYAEV---IDK---- 191 (236)
T ss_dssp TTCEEEEESTT-----SCSSCCHHHHHHHHHHHTTCSEEEEEESSSSCBCC-------CCBCSEECHHHH---HHT----
T ss_pred hcccccccccc-----cCCCCCCcHHHHHHHHHhchhHHHHhhcccccccccccccccccccccccHHHH---Hhc----
Confidence 99999876542 334569999999999999999999999999983 45889999987653 211
Q ss_pred hhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccCcHH
Q 007903 323 SEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLS 402 (585)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~~ 402 (585)
| + |..
T Consensus 192 -----------------------------------------------------G-~---------------------~v~ 196 (236)
T d2a1fa1 192 -----------------------------------------------------E-L---------------------KVM 196 (236)
T ss_dssp -----------------------------------------------------T-C---------------------CSS
T ss_pred -----------------------------------------------------C-C---------------------cee
Confidence 3 3 455
Q ss_pred HHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeec
Q 007903 403 ELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (585)
Q Consensus 403 kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~ 444 (585)
|++||..|.+.|++ ++|+||..++. |.++++++..||+|.
T Consensus 197 k~~Aa~~a~~~gi~-v~I~ng~~~~~-l~~~l~Ge~~GTlI~ 236 (236)
T d2a1fa1 197 DLSAFTLARDHGMP-IRVFNMGKPGA-LRQVVTGTEEGTTIC 236 (236)
T ss_dssp CHHHHHHHHHHTCC-EEEEETTSTTH-HHHHHTCSCSSEEEC
T ss_pred HHHHHHHHHHCCCe-EEEEeCCCCcH-HHHHHcCCCCcceeC
Confidence 89999999999997 99999999998 677889999999973
|
| >d1z9da1 c.73.1.3 (A:4-241) Uridylate kinase PyrH {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: PyrH-like domain: Uridylate kinase PyrH species: Streptococcus pyogenes [TaxId: 1314]
Probab=99.78 E-value=2.8e-18 Score=166.85 Aligned_cols=219 Identities=14% Similarity=0.104 Sum_probs=139.6
Q ss_pred cCCeEEEEeCCccCCCCC--------hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHH-HcCCcccccCCccCCCHHHH
Q 007903 98 RGGTFVVIISGEIVSSPY--------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLS-ERGHEAKYLGRYRITDSESL 168 (585)
Q Consensus 98 r~k~iVIKlGGs~l~~~~--------l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~-~~g~~~~~~~g~rvt~~~~l 168 (585)
+.|+|||||||++|++++ +++++++|+.|++.|+++|+|+||+........ ..+.. .....
T Consensus 3 k~krIViKiGgs~lt~~~~~~l~~~~l~~ia~~I~~l~~~g~~Vv~v~~g~~~~~~~~~~~~~~~----------~~~~~ 72 (238)
T d1z9da1 3 KYQRILIKLSGEALAGEKGVGIDIPTVQAIAKEIAEVHVSGVQIALVIGGGNLWRGEPAADAGMD----------RVQAD 72 (238)
T ss_dssp SCSEEEEEECGGGGTCSSSSSCCHHHHHHHHHHHHHHHTTTCEEEEEECCTTTCCHHHHHHHTCC----------HHHHH
T ss_pred CCCEEEEEECcceecCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEecccccccceeccccCCc----------chhHH
Confidence 468999999999998653 789999999999999999999999865443221 11111 11111
Q ss_pred HHHHHHHhHHHHHHHHhhCCCCCchhHHhcCCCCcceeEEeeecCcceeeeeeccccccccCcceeeEEEecHHHHHHHH
Q 007903 169 AAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERL 248 (585)
Q Consensus 169 ~~~~~~~G~i~~~L~~~L~~~~~~~~l~~~Gi~~~~~av~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~~~~I~~lL 248 (585)
.....+..+... +... .+..+++. ............ .........+....
T Consensus 73 ~~~~~~~~~~~~-~~~~--------~~~~~~i~----~~~~~~~~~~~~-----------------~~~~~~~~~i~~~~ 122 (238)
T d1z9da1 73 YTGMLGTVMNAL-VMAD--------SLQHYGVD----TRVQTAIPMQNV-----------------AEPYIRGRALRHLE 122 (238)
T ss_dssp HHHHHHHHHHHH-HHHH--------HHHTTTCC----EEEEESSCBTTT-----------------BEECCHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HHHH--------HHhhCCcc----chhhhhhhhHHH-----------------HhhhhHHHHHhhhc
Confidence 112222222221 2221 35666765 222111110000 00112234555444
Q ss_pred cCCCeEEEcCCccCCCCceeeeChHHHHHHHHHHcCCCEEEEeecccccC-------CCCcccccccHHHHHHHHHhhch
Q 007903 249 DGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVK 321 (585)
Q Consensus 249 ~~G~IPVi~~v~~~~~G~~~nid~D~lAa~lA~~L~AdkLIilTDV~gl~-------~~~~lI~~it~~e~~~li~~~~~ 321 (585)
....++. ... .+.....|+|.+|+.+|..++||.++++|||||++ +++++++.++..|. + .
T Consensus 123 ~~~~~~~-~~~----~~~~~~~~~d~~~~~~a~~~~a~~li~~tdVdGvy~~~P~~~~~a~~~~~~~~~~~--~-~---- 190 (238)
T d1z9da1 123 KNRIVVF-GAG----IGSPYFSTDTTAALRAAEIEADAILMAKNGVDGVYNADPKKDANAVKFDELTHGEV--I-K---- 190 (238)
T ss_dssp TTCEEEE-EST----TSCTTCCHHHHHHHHHHHTTCSEEEEEESSCCSCBSSCTTTCTTCCBCSEEEHHHH--H-T----
T ss_pred cccccce-ecc----eeccCCCCchHHHHHHHHHhhhhhhcccccccceecccccccccchhhccccccch--h-c----
Confidence 4443333 222 12334568899999999999999999999999983 35778888776542 1 0
Q ss_pred hhhHHHHHHhhhhcccccccCCCCCCCcccccCCCCccccchhccccCCccccCCCCCcccccccccccccccccccCcH
Q 007903 322 QSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYL 401 (585)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~~~~~~a~~~~~~~~~~~~m~ 401 (585)
.| +| +|
T Consensus 191 -----------------------------------------------------~g-~~-------------------~~- 196 (238)
T d1z9da1 191 -----------------------------------------------------RG-LK-------------------IM- 196 (238)
T ss_dssp -----------------------------------------------------TT-CC-------------------CS-
T ss_pred -----------------------------------------------------cC-cc-------------------hh-
Confidence 12 21 14
Q ss_pred HHHHHHHHHHHcCCCeEEEecCccchhhHHHHHhcCCCceeecc
Q 007903 402 SELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (585)
Q Consensus 402 ~kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~~~GT~i~~ 445 (585)
|++||..|.+.|++ ++|+||+.|+. |.+++.++.+||.|++
T Consensus 197 -k~~Aa~~a~~~gi~-v~I~nG~~p~~-i~~~l~Ge~~GTlIt~ 237 (238)
T d1z9da1 197 -DATASTLSMDNDID-LVVFNMNEAGN-IQRVVFGEHIGTTVSN 237 (238)
T ss_dssp -CHHHHHHHHHTTCE-EEEEETTSTTH-HHHHHTTCCCSEEEEC
T ss_pred -HHHHHHHHHHCCCc-EEEEeCCCcch-HHHHHCCCCCceEecc
Confidence 89999999999997 99999999998 6778899999999974
|
| >d2fiwa1 d.108.1.1 (A:2-157) Probable N-acetyltransferase RPA1999 {Rhodopseudomonas palustris [TaxId: 1076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable N-acetyltransferase RPA1999 species: Rhodopseudomonas palustris [TaxId: 1076]
Probab=99.51 E-value=2.1e-14 Score=131.29 Aligned_cols=119 Identities=11% Similarity=0.067 Sum_probs=87.6
Q ss_pred cccccccccCHHHHHHHHHHHHHccccc-------------cCCHHHHHhcc--CeEEEEEECCeEEEEEEEeeeccCCc
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALV-------------RRTDEELLKAL--DSFYVVEREGQIIACAALFPFFKEKC 513 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~-------------~~~~e~l~~~i--~~~~Va~~dg~IVG~~~l~~~~~~~~ 513 (585)
..||+++++|++++.+|+.......... .++.+.+...+ ..++|++.||++|||+.+.+ .
T Consensus 4 ~~IR~a~~~D~~~l~~l~~~a~~~~~~~~y~~~~~~~w~~~~~~~~~~~~~~~~~~~~va~~~~~ivG~~~~~~-----~ 78 (156)
T d2fiwa1 4 PALRPYLPEDAAVTAAIFVASIEQLTADDYSEEQQEAWASAADDEAKFAARLSGQLTLIATLQGVPVGFASLKG-----P 78 (156)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHHHCTTTSCHHHHHHHHGGGSSHHHHHHHHHTSEEEEEEETTEEEEEEEEET-----T
T ss_pred cEEeeCCHHHHHHHHHHHHHHHHhhhhhcCCHHHHHhhccCCCCHHHHHHhccCceEEEEEECCEEEEEEeecc-----c
Confidence 4699999999999999976544322111 12233333333 56899999999999998762 4
Q ss_pred eEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceecccccccccCeeecCc
Q 007903 514 GEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYYRLKFNCSSK 576 (585)
Q Consensus 514 aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YYrlGF~~~~~ 576 (585)
++|..+||+|+|||+|||++||++++ ++|++.|+..........+..+|.++||+..+.
T Consensus 79 ~~i~~l~V~p~~~g~GiG~~Ll~~~~----~~a~~~g~~~l~~~~~~~A~~fY~k~GF~~~~~ 137 (156)
T d2fiwa1 79 DHIDMLYVHPDYVGRDVGTTLIDALE----KLAGARGALILTVDASDNAAEFFAKRGYVAKQR 137 (156)
T ss_dssp TEEEEEEECGGGCSSSHHHHHHHHHH----HHHHTTTCSEEEEEECTTTHHHHHTTTCEEEEE
T ss_pred hhHHHHhccHHHcCCCHHHHHHHHHH----HHHHhcCCCEEEEEeccchhHHHHhCCCEEEEE
Confidence 58999999999999999999999999 999999987654333223334455899987643
|
| >d2hmfa1 c.73.1.3 (A:2-303) Aspartokinase {Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: PyrH-like domain: Aspartokinase species: Methanococcus jannaschii [TaxId: 2190]
Probab=99.50 E-value=1e-12 Score=133.19 Aligned_cols=198 Identities=18% Similarity=0.204 Sum_probs=127.8
Q ss_pred eEEEEeCCccCCCCC-hHHHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHcC------Ccc-cc---cCCc---------
Q 007903 101 TFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERG------HEA-KY---LGRY--------- 160 (585)
Q Consensus 101 ~iVIKlGGs~l~~~~-l~~l~~~Ia~L~~~G~~vVlVhGgg~~i~~~l~~~g------~~~-~~---~~g~--------- 160 (585)
+.|.|+||+.+.+.+ ++++++-|..-.+.+.++|+|.++-.-+...|.+.. -.. .. ...+
T Consensus 1 ~tV~KFGGTSvadae~i~~V~~II~~~~~~~~~~vVVVSA~ggvTn~L~~~~~~a~~~~~~~~~~~~l~~i~~~h~~~i~ 80 (302)
T d2hmfa1 1 TTVMKFGGTSVGSGERIRHVAKIVTKRKKEDDDVVVVVSAMSEVTNALVEISQQALDVRDIAKVGDFIKFIREKHYKAIE 80 (302)
T ss_dssp CEEEEECTGGGSSHHHHHHHHHHHHHHHHHCSCEEEEECCCTTHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEeCcccCCCHHHHHHHHHHHHHHHhcCCCEEEEEeCCCCChhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH
Confidence 479999999999855 788888777666667788888887333433332221 000 00 0000
Q ss_pred -cCCC--------------------------------HHHHHHHHHHHhHH-HHHHHHhhCCCCCchhHHhcCCCCccee
Q 007903 161 -RITD--------------------------------SESLAAAMEAAGGI-RMMIEAKLSPGPPICNIRRHGDSSRWHE 206 (585)
Q Consensus 161 -rvt~--------------------------------~~~l~~~~~~~G~i-~~~L~~~L~~~~~~~~l~~~Gi~~~~~a 206 (585)
-+++ +...+. ..+.|+. ...|++. .|++.|++ +
T Consensus 81 ~l~~~~~~~~~~~~~i~~~l~~L~~~l~~~~~~~e~~~~~~D~-ils~GE~lSa~lla~--------~L~~~Gi~----a 147 (302)
T d2hmfa1 81 EAIKSEEIKEEVKKIIDSRIEELEKVLIGVAYLGELTPKSRDY-ILSFGERLSSPILSG--------AIRDLGEK----S 147 (302)
T ss_dssp HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHH-HHTHHHHHHHHHHHH--------HHHHTTCC----E
T ss_pred HHhccHhHHHHHHHHHHHHHHHHHHHHHHhhhcccCCHHHHHH-HhhhhhhHHhHHHHH--------HHHHcCCc----e
Confidence 0011 111111 1223332 2233333 46888887 5
Q ss_pred EEeeecCcceeeeeeccccccccCcceeeEEEec-HHHHHHHHcCCCeEEEcCC-ccCCCCceeee---ChHHHHHHHHH
Q 007903 207 VGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVD-VTRMRERLDGGCLVILSNL-GYSSSGEVLNC---NTYEVATACAL 281 (585)
Q Consensus 207 v~l~~~dg~~~~a~~~g~~~g~d~g~~G~v~~v~-~~~I~~lL~~G~IPVi~~v-~~~~~G~~~ni---d~D~lAa~lA~ 281 (585)
..+...+-.+++. ..++. ..+.... .+.|..+++.+.|||+.+. |.+.+|++..+ .+|..|+.+|.
T Consensus 148 ~~ld~~~~~i~t~--------~~~~~-a~~~~~~~~~~l~~~~~~~~v~Vv~GFig~~~~G~~ttLgRgGSD~tA~~la~ 218 (302)
T d2hmfa1 148 IALEGGEAGIITD--------NNFGS-ARVKRLEVKERLLPLLKEGIIPVVTGFIGTTEEGYITTLGRGGSDYSAALIGY 218 (302)
T ss_dssp EEECTTTTTEEEC--------SCTTS-CCEEEECHHHHHHHHHHTTCEEEEESSEEECTTCCEEECCTTTHHHHHHHHHH
T ss_pred EEeeccccccccC--------Cccch-hhhhhhhhHHHHHHHHhcCCeEEeecccccCCCCCEEEEeccCcccHHHHHHH
Confidence 5555444322221 12332 2334444 4678899999999999985 78889988766 89999999999
Q ss_pred HcCCCEEEEeeccccc---C----CCCcccccccHHHHHHHHHhhc
Q 007903 282 AIEADKLICIIDGPIL---D----ESGHLIRFLTLQEADSLIRQRV 320 (585)
Q Consensus 282 ~L~AdkLIilTDV~gl---~----~~~~lI~~it~~e~~~li~~~~ 320 (585)
+|+|+.+++.|||+|+ | +++++|++++.+|+.+|...|+
T Consensus 219 ~l~A~~~~i~tdv~gi~~~dP~~~~~a~~~~~~~y~ea~eLa~~g~ 264 (302)
T d2hmfa1 219 GLDADIIEIWTDVSGVYTTDPRLVPTARRIPKLSYIEAMELAYFGA 264 (302)
T ss_dssp HHTCSEEEEEESSSSCBSSCTTTCTTCCBCSEEEHHHHHHHHHTTC
T ss_pred HhccHHHHHHhccchhccchhhcCCCceEecccCHHHHHHHHhCCC
Confidence 9999999999999998 3 4689999999999999976654
|
| >d1z4ea1 d.108.1.1 (A:4-153) Transcriptional regulator BH1968 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Transcriptional regulator BH1968 species: Bacillus halodurans [TaxId: 86665]
Probab=99.49 E-value=3.7e-14 Score=127.47 Aligned_cols=130 Identities=15% Similarity=0.165 Sum_probs=94.3
Q ss_pred cccccccccCHHHHHHHHHHHH----HccccccCCHHHHH--hcc-----CeEEEEEECCeEEEEEEEeeec-----cCC
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLV----ESGALVRRTDEELL--KAL-----DSFYVVEREGQIIACAALFPFF-----KEK 512 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~----~~~~~~~~~~e~l~--~~i-----~~~~Va~~dg~IVG~~~l~~~~-----~~~ 512 (585)
.+||+++++|+++|.+++.... ......++..+... ..+ ..+++++.||++||++.+.... ...
T Consensus 2 i~IR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iiG~~~~~~~~~~~~~~~~ 81 (150)
T d1z4ea1 2 VTIREATEGDLEQMVHMLADDVLGRKRERYEKPLPVSYVRAFKEIKKDKNNELIVACNGEEIVGMLQVTFTPYLTYQGSW 81 (150)
T ss_dssp CEEEECCGGGHHHHHHHHHHSTTGGGTCCCCSSCCHHHHHHHHHHHHCTTEEEEEEEETTEEEEEEEEEEEECSHHHHCE
T ss_pred EEEEeCCHHHHHHHHHHHHHhhhhhccccccccchhHHHHHHHHHhcCCCcEEEEEEECCceEEEEEEEeecccCcCCCC
Confidence 4799999999999999965321 11122222222211 111 4677889999999999886322 235
Q ss_pred ceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee--ccccccc-ccCeeecCccccccc
Q 007903 513 CGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR--GRTHSYY-RLKFNCSSKSFHISL 582 (585)
Q Consensus 513 ~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~--~~a~~YY-rlGF~~~~~~~~~~~ 582 (585)
.++|..++|+|+|||+|||++||++++ ++|+++|++...+.... ..+..|| |+||+.++.+|.+.|
T Consensus 82 ~~~i~~~~v~~~~rg~Gig~~l~~~~~----~~a~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~~~~~~~ 150 (150)
T d1z4ea1 82 RATIEGVRTHSAARGQGIGSQLVCWAI----ERAKERGCHLIQLTTDKQRPDALRFYEQLGFKASHEGLKMHF 150 (150)
T ss_dssp EEEEEEEEECTTSTTSSHHHHHHHHHH----HHHHHTTEEEEEEEEETTCTTHHHHHHHHTCEEEEEEEEEEC
T ss_pred EEEEEEEEcCHHHcCCChhHHHHHHHH----HHHHHcCCCEEEEEEcCCCHHHHHHHHHCCCEEcceeEEEeC
Confidence 689999999999999999999999999 99999999876554332 2344455 799999988888765
|
| >d2fe7a1 d.108.1.1 (A:3-158) Probable N-acetyltransferase PA0478 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable N-acetyltransferase PA0478 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.49 E-value=4.3e-14 Score=128.77 Aligned_cols=125 Identities=21% Similarity=0.209 Sum_probs=93.0
Q ss_pred cccccccccCHHHHHHHHHHHHHc---cccccCCHHHHHhcc------CeEEEEEECCeEEEEEEEeeec----cCCceE
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVES---GALVRRTDEELLKAL------DSFYVVEREGQIIACAALFPFF----KEKCGE 515 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~---~~~~~~~~e~l~~~i------~~~~Va~~dg~IVG~~~l~~~~----~~~~ae 515 (585)
++||+++++|++.|.+|+..+... .....++.+.+.+.+ ..++|++.+|++|||+.+.+.. ..+.++
T Consensus 1 i~IR~a~~~D~~~i~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ivG~~~~~~~~~~~~~~~~~~ 80 (156)
T d2fe7a1 1 LEIRPAVPADAEQILAFIIELADYERARHEVVTDVEGIRRSLFAEGSPTRALMCLSEGRPIGYAVFFYSYSTWLGRNGIY 80 (156)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHHTTCGGGCCCCHHHHHHHHTSTTCSEEEEEEEETTEEEEEEEEEEEEETTTTEEEEE
T ss_pred CEEEECCHHHHHHHHHHHHHHHHHhcCcccccCCHHHHHHHHhccCCCceEEEEeeCCEEEEEEeEeecccccccCCeEE
Confidence 469999999999999998765332 122345666666543 3578999999999998776432 245788
Q ss_pred EeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee--ccccccc-ccCeeecCcc
Q 007903 516 VAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR--GRTHSYY-RLKFNCSSKS 577 (585)
Q Consensus 516 I~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~--~~a~~YY-rlGF~~~~~~ 577 (585)
|..+||+|+|||+|+|++|+++++ ++|++.|+....+.... ..+..|| ++||+..+..
T Consensus 81 i~~~~V~p~~Rg~GiG~~L~~~~~----~~a~~~g~~~i~l~v~~~N~~a~~~Y~k~GF~~~~~~ 141 (156)
T d2fe7a1 81 LEDLYVTPEYRGVGAGRRLLRELA----REAVANDCGRLEWSVLDWNQPAIDFYRSIGALPQDEW 141 (156)
T ss_dssp EEEEEECGGGCC--HHHHHHHHHH----HHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEECTTE
T ss_pred eeeeeechhhhccChHHHHHHHHH----HHHHHccCCcceEEEcCCCHHHHHHHHHCCCEEcCcE
Confidence 999999999999999999999999 99999999886544332 2344455 7999987653
|
| >d1i12a_ d.108.1.1 (A:) Glucosamine-phosphate N-acetyltransferase GNA1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Glucosamine-phosphate N-acetyltransferase GNA1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.43 E-value=6.1e-14 Score=126.67 Aligned_cols=132 Identities=17% Similarity=0.170 Sum_probs=90.1
Q ss_pred cccccccccccccCHHHHHHHHHHHHHccccccC----CHHHHHhcc--------------CeEEEEEECCeEEEEEEEe
Q 007903 445 SDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRR----TDEELLKAL--------------DSFYVVEREGQIIACAALF 506 (585)
Q Consensus 445 ~d~~~~IR~at~~D~~~I~~Li~~~~~~~~~~~~----~~e~l~~~i--------------~~~~Va~~dg~IVG~~~l~ 506 (585)
||.+ +||+++++|++++.+++..+......... ..+.+.... ..+++++.+++++|++.+.
T Consensus 2 p~~~-~IR~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~ 80 (157)
T d1i12a_ 2 PDGF-YIRRMEEGDLEQVTETLKVLTTVGTITPESFCKLIKYWNEATVWNDNEDKKIMQYNPMVIVDKRTETVAATGNII 80 (157)
T ss_dssp CTTE-EEEECCGGGHHHHHHHHTTTSCCCCCCHHHHHHHHHHHHHCBCCCC---CCCBSBCCEEEEETTTTEEEEEEEEE
T ss_pred CCCc-EEEeCCHHHHHHHHHHHHHHhhccccCHHHHHHHHHhhhhhhhHHHhhhhcccccceEEEEEEECCEEEEEEEEe
Confidence 4444 89999999999999996533211111000 001111110 2345666789999999875
Q ss_pred eec-----cCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceecccccccccCeeecCcccccc
Q 007903 507 PFF-----KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYYRLKFNCSSKSFHIS 581 (585)
Q Consensus 507 ~~~-----~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YYrlGF~~~~~~~~~~ 581 (585)
... ....++|..|+|+|+|||+|+|++||++++ ++|+++|+....+.......+.|.|+||+..+.+|.++
T Consensus 81 ~~~~~~~~~~~~~~i~~l~v~p~~rg~Gig~~L~~~~~----~~a~~~g~~~i~l~~~~~~~~~Y~k~GF~~~g~~m~~r 156 (157)
T d1i12a_ 81 IERKIIHELGLCGHIEDIAVNSKYQGQGLGKLLIDQLV----TIGFDYGCYKIILDCDEKNVKFYEKCGFSNAGVEMQIR 156 (157)
T ss_dssp EEECSHHHHCEEEEEEEEEECGGGTTSSHHHHHHHHHH----HHHHHTTCSEEEEEECGGGHHHHHHTTCEEEEEEEEEE
T ss_pred ccccccccCcceeEEEEEEecHhhcCCCchHHHHHHHH----HHHHHCCCCEEEEEECHHHHHHHHhCCCEEeeEEEEEc
Confidence 322 235689999999999999999999999999 99999999875443333333445579999998887653
|
| >d2cdqa1 c.73.1.3 (A:25-328) Aspartokinase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: PyrH-like domain: Aspartokinase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.41 E-value=5.8e-12 Score=127.59 Aligned_cols=79 Identities=18% Similarity=0.202 Sum_probs=67.8
Q ss_pred HHHHHHHcCCCeEEEcCC-ccC-CCCceeee---ChHHHHHHHHHHcCCCEEEEeeccccc---C----CCCcccccccH
Q 007903 242 TRMRERLDGGCLVILSNL-GYS-SSGEVLNC---NTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTL 309 (585)
Q Consensus 242 ~~I~~lL~~G~IPVi~~v-~~~-~~G~~~ni---d~D~lAa~lA~~L~AdkLIilTDV~gl---~----~~~~lI~~it~ 309 (585)
..+..+++.+.|||+.+. +.+ ++|++..+ .+|..|+.+|.+|+|+.+.+.|||||+ | +++++|++|+.
T Consensus 174 ~~~~~~~~~~~v~vv~Gfig~~~~~G~~ttLGRgGSD~TAa~la~~l~A~~~~iwtDV~Gi~taDPr~v~~a~~i~~lsy 253 (304)
T d2cdqa1 174 RLYDDWMHDPAVPIVTGFLGKGWKTGAVTTLGRGGSDLTATTIGKALGLKEIQVWKDVDGVLTCDPTIYKRATPVPYLTF 253 (304)
T ss_dssp HHHHHHHHSCCEEEEESSEEEETTTCCEEECCTTHHHHHHHHHHHHHTCSEEEEEESSSSSBSSCTTTCTTCCBCCEEEH
T ss_pred HHhhhhhccCcEEEeeccccccCcCCceeeeccCccccHHHHHHHHhCchHHHHhcCcchheeccccccCCceEcCccCH
Confidence 445667899999999985 665 57888766 789999999999999999999999998 4 36999999999
Q ss_pred HHHHHHHHhhc
Q 007903 310 QEADSLIRQRV 320 (585)
Q Consensus 310 ~e~~~li~~~~ 320 (585)
+|+.+|..-|+
T Consensus 254 ~EA~ela~~Ga 264 (304)
T d2cdqa1 254 DEAAELAYFGA 264 (304)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHhCCC
Confidence 99999976655
|
| >d1yr0a1 d.108.1.1 (A:4-166) Phosphinothricin acetyltransferase {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Phosphinothricin acetyltransferase species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.38 E-value=1.1e-12 Score=119.39 Aligned_cols=124 Identities=19% Similarity=0.162 Sum_probs=90.9
Q ss_pred cccccccccCHHHHHHHHHHHHHccc----cccCCHHHHHhcc-------CeEEEEEECCeEEEEEEEeeecc---CCce
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGA----LVRRTDEELLKAL-------DSFYVVEREGQIIACAALFPFFK---EKCG 514 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~----~~~~~~e~l~~~i-------~~~~Va~~dg~IVG~~~l~~~~~---~~~a 514 (585)
.+||+++++|+++|.+++++...... ..+.+.+.....+ ..++|++.||++||++.+.+... ...+
T Consensus 2 i~IR~a~~~D~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ivG~~~~~~~~~~~~~~~~ 81 (163)
T d1yr0a1 2 VELRDATVDDLSGIMEIYNDAVVNTTAIWNEVVVDLENRKDWFAARTSRGFPVIVAILDGKVAGYASYGDWRAFDGYRHT 81 (163)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHHCSSSSSCCCCCHHHHHHHHHHHHHHTCCEEEEEETTEEEEEEEEEESSSSGGGTTE
T ss_pred EEEEeCCHHHHHHHHHHHHHHHhhcccccccCCCCHHHHHHHHHhhccCCCcEEEEEECCeEEEeecceeecccccccce
Confidence 47999999999999999877544322 2234444443322 45789999999999998875432 2456
Q ss_pred EEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccce--eccccc-ccccCeeecCc
Q 007903 515 EVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFL--RGRTHS-YYRLKFNCSSK 576 (585)
Q Consensus 515 eI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~--~~~a~~-YYrlGF~~~~~ 576 (585)
.+..++|+|+|||+|+|++|+++++ ++|+++|+........ +.++.. |.++||+..+.
T Consensus 82 ~~~~~~v~p~~rg~Glg~~ll~~~~----~~a~~~g~~~l~~~v~~~N~~a~~~y~k~GF~~~G~ 142 (163)
T d1yr0a1 82 REHSVYVHKDARGHGIGKRLMQALI----DHAGGNDVHVLIAAIEAENTASIRLHESLGFRVVGR 142 (163)
T ss_dssp EEEEEEECTTSTTSSHHHHHHHHHH----HHHHTTTCCEEEEEEETTCHHHHHHHHHTTCEEEEE
T ss_pred EEEEeeeeecccCCCCceeeeeccc----ccccccccceEEEEEecCCHHHHHHHHHCCCEEEEE
Confidence 7889999999999999999999999 9999999987533222 233344 55799987643
|
| >d1qsra_ d.108.1.1 (A:) Catalytic domain of GCN5 histone acetyltransferase {Tetrahymena thermophila [TaxId: 5911]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Catalytic domain of GCN5 histone acetyltransferase species: Tetrahymena thermophila [TaxId: 5911]
Probab=99.38 E-value=5.3e-13 Score=123.22 Aligned_cols=121 Identities=12% Similarity=0.108 Sum_probs=88.5
Q ss_pred ccccccccCHHHHHHHHHHH---HHccccccCCHHHHHhcc-----CeEEEEEECCeEEEEEEEeeeccCCceEEeeEEE
Q 007903 450 GTRTAKVTDLSGIKQIIQPL---VESGALVRRTDEELLKAL-----DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGV 521 (585)
Q Consensus 450 ~IR~at~~D~~~I~~Li~~~---~~~~~~~~~~~e~l~~~i-----~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V 521 (585)
.+|.++.+|.++...++..+ ..... ..+..+.+...+ ..++|++.+|++|||+.+.+....+.++|..++|
T Consensus 2 ~~r~i~~~d~~e~~~lL~~l~~if~~~l-p~~~~~y~~r~i~d~~~~~~~v~~~~g~iVG~~~~~~~~~~~~~ei~~laV 80 (162)
T d1qsra_ 2 DFDILTNDGTHRNMKLLIDLKNIFSRQL-PKMPKEYIVKLVFDRHHESMVILKNKQKVIGGICFRQYKPQRFAEVAFLAV 80 (162)
T ss_dssp EEEEECCCSCHHHHHHHHHHHHHHHHHC-TTSCHHHHHHHHTSTTEEEEEEEETTTEEEEEEEEEEETTTTEEEEEEEEE
T ss_pred EEEEecCCCCHHHHHHHHHHHHHHHHHC-CCCCHHHHHHHhhCcCCcEEEEEEECCEEEEEEEEEEECCCCEEEEEEEEE
Confidence 47888888877766664433 22222 233445444333 4678889999999999988666677899999999
Q ss_pred ccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceecccccccccCeeecC
Q 007903 522 SPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYYRLKFNCSS 575 (585)
Q Consensus 522 ~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YYrlGF~~~~ 575 (585)
+|+|||+|+|++||++++ ++|++.|+...-......+..+|.+.||+..+
T Consensus 81 ~p~~rg~GiG~~Ll~~l~----~~a~~~g~~~i~l~~~~~a~~fY~k~GF~~~~ 130 (162)
T d1qsra_ 81 TANEQVRGYGTRLMNKFK----DHMQKQNIEYLLTYADNFAIGYFKKQGFTKEH 130 (162)
T ss_dssp CGGGCSSSHHHHHHHHHH----HHHHHTTCCEEEEEECTTTHHHHHHTTCBSSC
T ss_pred cHHHccCchHHHHHHHHH----HHHHhCCCeEEEEecCCccHHHHHhCCCeeec
Confidence 999999999999999999 99999999875433322334455589997643
|
| >d2atra1 d.108.1.1 (A:1-137) Probable acetyltransferase SP0256 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase SP0256 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.38 E-value=3.4e-13 Score=120.22 Aligned_cols=119 Identities=16% Similarity=0.162 Sum_probs=86.8
Q ss_pred cccccccccCHHHHHHHHHHHHHcccc-ccCCHHHHHhcc---CeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccC
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGAL-VRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPE 524 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~-~~~~~e~l~~~i---~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~Pe 524 (585)
++||+++..|++++.+|++.. .+. ...+.+.+...+ ..+++++.++++||++.+.. .....++|..++|+|+
T Consensus 2 i~Ir~~~~~d~~ei~~l~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ivG~~~~~~-~~~~~~~i~~l~V~~~ 77 (137)
T d2atra1 2 ITIKKQEIVKLEDVLHLYQAV---GWTNYTHQTEMLEQALSHSLVIYLALDGDAVVGLIRLVG-DGFSSVFVQDLIVLPS 77 (137)
T ss_dssp EEEEEESCCCHHHHHHHHHTT---CCCC-----CHHHHHHTSCSEEEEEEETTEEEEEEEEEE-CSSSEEEEEEEEECTT
T ss_pred EEEEeCChhhHHHHHHHHHHc---CCCCCCCCHHHHHHHHhCCcEEEEEEECCEEEEEEEEEc-cCCceEEEEEEEEEHH
Confidence 579999999999999996432 221 122334444433 56888899999999998873 4567899999999999
Q ss_pred CcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceeccccccc-ccCeeecCc
Q 007903 525 CRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYY-RLKFNCSSK 576 (585)
Q Consensus 525 yRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YY-rlGF~~~~~ 576 (585)
|||+|+|++||++++ +.+++.++....+.. ...+..|| ++||+..+.
T Consensus 78 ~rg~GiG~~Ll~~~~----~~~~~~~~~~i~l~~-~~~a~~fY~k~GF~~~~~ 125 (137)
T d2atra1 78 YQRQGIGSSLMKEAL----GNFKEAYQVQLATEE-TEKNVGFYRSMGFEILST 125 (137)
T ss_dssp SCSSSHHHHHHHHHH----GGGTTCSEEECCCCC-CHHHHHHHHHTTCCCGGG
T ss_pred HcCchHHHHHHHHHH----HHHHHCCCeEEEEee-cHHHHHHHHhCCCEECcc
Confidence 999999999999999 888888876653322 22333455 799987644
|
| >d1tiqa_ d.108.1.1 (A:) Protease synthase and sporulation negative regulatory protein PaiA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Protease synthase and sporulation negative regulatory protein PaiA species: Bacillus subtilis [TaxId: 1423]
Probab=99.38 E-value=6.6e-13 Score=122.75 Aligned_cols=124 Identities=15% Similarity=0.160 Sum_probs=91.1
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCC-------------HHHHHhcc----CeEEEEEECCeEEEEEEEeeec--
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRT-------------DEELLKAL----DSFYVVEREGQIIACAALFPFF-- 509 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~-------------~e~l~~~i----~~~~Va~~dg~IVG~~~l~~~~-- 509 (585)
++||+++++|++.|.+|........+....+ .+.+...+ ..+++++.||++|||+.+.+..
T Consensus 2 i~ir~at~~D~~~l~~l~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~ivG~~~~~~~~~~ 81 (173)
T d1tiqa_ 2 VKMKKCSREDLQTLQQLSIETFNDTFKEQNSPENMKAYLESAFNTEQLEKELSNMSSQFFFIYFDHEIAGYVKVNIDDAQ 81 (173)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHSSHHHHHHHHHCTTEEEEEEEETTEEEEEEEEEEGGGS
T ss_pred EEEEECCHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHhcCCHHHHHHHHhCCCcEEEEEEECCEecceEEEEecCcc
Confidence 4799999999999999966554433322222 23333322 4678999999999999986432
Q ss_pred ----cCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccce--eccccccc-ccCeeecCc
Q 007903 510 ----KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFL--RGRTHSYY-RLKFNCSSK 576 (585)
Q Consensus 510 ----~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~--~~~a~~YY-rlGF~~~~~ 576 (585)
....++|..++|+|+|||+|+|++||++++ +.|++.|+....+... +..+..|| ++||+..+.
T Consensus 82 ~~~~~~~~~~i~~i~v~~~~rgkGig~~ll~~~~----~~~~~~g~~~i~l~v~~~N~~a~~fY~k~GF~~~g~ 151 (173)
T d1tiqa_ 82 SEEMGAESLEIERIYIKNSFQKHGLGKHLLNKAI----EIALERNKKNIWLGVWEKNENAIAFYKKMGFVQTGA 151 (173)
T ss_dssp SSCCCTTEEEEEEEEECGGGCSSSHHHHHHHHHH----HHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEEEEE
T ss_pred ccccCCCeEEEEEEEECHHHcCCCCCcchhHhhh----hhhhhhhcchhhccccccCHHHHHHHHHCCCEEeeE
Confidence 235789999999999999999999999999 9999999987544322 22344455 799998864
|
| >d2aj6a1 d.108.1.1 (A:1-118) Hypothetical protein MW0638 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein MW0638 species: Staphylococcus aureus [TaxId: 1280]
Probab=99.35 E-value=4.3e-12 Score=109.80 Aligned_cols=101 Identities=23% Similarity=0.185 Sum_probs=74.7
Q ss_pred cccccccCHHHHHHHHH---HHHHc-cccccCCH-------HHHHhcc----CeEEEEEECCeEEEEEEEeeeccCCceE
Q 007903 451 TRTAKVTDLSGIKQIIQ---PLVES-GALVRRTD-------EELLKAL----DSFYVVEREGQIIACAALFPFFKEKCGE 515 (585)
Q Consensus 451 IR~at~~D~~~I~~Li~---~~~~~-~~~~~~~~-------e~l~~~i----~~~~Va~~dg~IVG~~~l~~~~~~~~ae 515 (585)
||+++.+|.+.|.++.. ..... ......+. +.+...+ ..+||++.+|++|||+.+.+....+.++
T Consensus 1 IR~~~kdd~~~I~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ivG~~~~~~~~~~~~~~ 80 (118)
T d2aj6a1 1 MRTLNKDEHNYIKQIANIHETLLSQVESNYKCTKLSIALRYEMICSRLEHTNDKIYIYENEGQLIAFIWGHFSNEKSMVN 80 (118)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHHHHTCSSCCCCHHHHHHHHHHHHHHHHSSSEEEEEEEETTEEEEEEEEEEETTTTEEE
T ss_pred CCcCChhHHHHHHHHHHHHHHHHHhccccccchhhhhHHHHHHHHHhhcCCCcEEEEEEECCEEEEEeeeccccCCCeEE
Confidence 69999999888777632 22221 11111111 1222221 4689999999999999887655567899
Q ss_pred EeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccC
Q 007903 516 VAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNG 555 (585)
Q Consensus 516 I~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g 555 (585)
|..|+|+|+|||+|+|++||++++ ++|+++|+....
T Consensus 81 i~~l~V~~~~RgkGiG~~Ll~~~~----~~a~~~g~~~i~ 116 (118)
T d2aj6a1 81 IELLYVEPQFRKLGIATQLKIALE----KWAKTMNAKRIS 116 (118)
T ss_dssp EEEEEECGGGTTSSHHHHHHHHHH----HHHHHTTCSCCC
T ss_pred EEEEEEchhhccCHHHHHHHHHHH----HHHHHhCCCEEE
Confidence 999999999999999999999999 999999998643
|
| >d2j0wa1 c.73.1.3 (A:3-294) Aspartokinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: PyrH-like domain: Aspartokinase species: Escherichia coli [TaxId: 562]
Probab=99.34 E-value=1.8e-11 Score=123.20 Aligned_cols=77 Identities=23% Similarity=0.286 Sum_probs=64.6
Q ss_pred HHHHHHcCCCeEEEcC-CccCCCCceeee---ChHHHHHHHHHHcCCCEEEEeeccccc---C----CCCcccccccHHH
Q 007903 243 RMRERLDGGCLVILSN-LGYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTLQE 311 (585)
Q Consensus 243 ~I~~lL~~G~IPVi~~-v~~~~~G~~~ni---d~D~lAa~lA~~L~AdkLIilTDV~gl---~----~~~~lI~~it~~e 311 (585)
.+...++.+ |||+++ +|.+.+|++..+ .+|..|+.+|.+|+|+.+.+.|||||+ | +++++|++|+.+|
T Consensus 167 ~~~~~~~~~-i~Vv~GFig~~~~G~~ttLGRgGSDytAa~~a~~l~A~~v~iwtDV~Gi~taDP~~v~~A~~i~~lsy~E 245 (292)
T d2j0wa1 167 QLLPRLNEG-LVITQGFIGSENKGRTTTLGRGGSDYTAALLAEALHASRVDIWTDVPGIYTTDPRVVSAAKRIDEIAFAE 245 (292)
T ss_dssp HTHHHHHHS-EEEEESSEEECTTSCEEECCTTHHHHHHHHHHHHTTCSEEEEEESSSSEESSCTTTCTTCCEESEEEHHH
T ss_pred hhhhhhccc-ccccccccccccCCceEeeccCcccHHHHHHHHHhhcHHHHHhccCcceeechhhcCCCceEcceeCHHH
Confidence 334444554 889988 588889998876 789999999999999999999999998 4 4689999999999
Q ss_pred HHHHHHhhc
Q 007903 312 ADSLIRQRV 320 (585)
Q Consensus 312 ~~~li~~~~ 320 (585)
+.+|..-|+
T Consensus 246 A~ela~~Ga 254 (292)
T d2j0wa1 246 AAEMATFGA 254 (292)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHhCCc
Confidence 999976655
|
| >d2fiaa1 d.108.1.1 (A:1-157) Probable acetyltransferase EF1919 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase EF1919 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.33 E-value=2.6e-12 Score=116.25 Aligned_cols=124 Identities=13% Similarity=0.116 Sum_probs=93.3
Q ss_pred cccccccccCHHHHHHHHHHHHHc---cccccC-----CHHHHHhcc--CeEEEEEECCeEEEEEEEeeeccCCceEEee
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVES---GALVRR-----TDEELLKAL--DSFYVVEREGQIIACAALFPFFKEKCGEVAA 518 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~---~~~~~~-----~~e~l~~~i--~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~ 518 (585)
++||+++++|+++|.+++...... ....+| ..+.+...+ ..+||++.+++++|++.+....+...+++..
T Consensus 1 m~iR~a~~~Dl~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~i~~ 80 (157)
T d2fiaa1 1 MKIRVADEKELPMILQFLTEVKAYMDVVGITQWTKDYPSQGDIQEDITKKRLYLLVHEEMIFSMATFCMEQEQDFVWLKR 80 (157)
T ss_dssp CCEEECCGGGTTHHHHHHHHHHHHHHHHTCCCCCSSSSCHHHHHHHHHTTCEEEEEETTEEEEEEEEEECTTCSEEEEEE
T ss_pred CEEEECCHHHHHHHHHHHHHHHHHHHhcCcchhhccchhHHHHHHhhccCceEEEEECCEEEEEEEEeecCccceeeecc
Confidence 479999999999999997654321 111122 345555544 6778999999999999998655667899999
Q ss_pred EEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee--ccc-ccccccCeeecCc
Q 007903 519 IGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR--GRT-HSYYRLKFNCSSK 576 (585)
Q Consensus 519 L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~--~~a-~~YYrlGF~~~~~ 576 (585)
++|+|+|||+|+|++||++++ ++|++.|+....+.... ..+ +.|.++||+..+.
T Consensus 81 ~~v~~~~rg~Gig~~ll~~~~----~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~v~e 137 (157)
T d2fiaa1 81 FATSPNYIAKGYGSLLFHELE----KRAVWEGRRKMYAQTNHTNHRMIRFFESKGFTKIHE 137 (157)
T ss_dssp EEECGGGTTTTHHHHHHHHHH----HHHHTTTCCEEEEEEETTCHHHHHHHHHTTCEEEEE
T ss_pred cEECHHHcCCCCcchhhHHHH----HHHHHCCCCEEEEEecCCcHHHHHHHHHCCCEEeee
Confidence 999999999999999999999 99999998865433222 233 3455799997653
|
| >d2i6ca1 d.108.1.1 (A:1001-1160) Putative acetyltransferase PA4794 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Putative acetyltransferase PA4794 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.32 E-value=7.3e-13 Score=120.35 Aligned_cols=123 Identities=19% Similarity=0.200 Sum_probs=89.9
Q ss_pred cccccccccCHHHHHHHHHHHHHcc-----ccccCCHHHHHhcc---CeEEEEEECCeEEEEEEEeeeccCCceEEeeEE
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESG-----ALVRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIG 520 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~-----~~~~~~~e~l~~~i---~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~ 520 (585)
.++|+++++|++.+.++........ ...+++.+.+.+.+ ..++|++.+|++|||+.+........++|..++
T Consensus 3 lt~R~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~vG~~~~~~~~~~~~~~i~~~~ 82 (160)
T d2i6ca1 3 LSHRPAETGDLETVAGFPQDRDELFYCYPKAIWPFSVAQLAAAIAERRGSTVAVHDGQVLGFANFYQWQHGDFCALGNMM 82 (160)
T ss_dssp CEEEECCGGGHHHHHTCCCSHHHHHHHCTTCCSSCCHHHHHHHHHHSEEEEEEEETTEEEEEEEEEEEETTTEEEEEEEE
T ss_pred eEEecCCHHHHHHHHHHHhCHHHHhhhcccccCCCCHHHHHHHHhccCCeEEEEECCEEEEEeeeeccccCCEEEEEEeE
Confidence 5799999999999999865433221 22345666665544 567888999999999998866666789999999
Q ss_pred EccCCcCCcHHHHHHHHHHhhhHHHHHHc-CCcccCcc---ceecccccccccCeeecC
Q 007903 521 VSPECRGQGQGDKLLGLCIWPLLSETRYD-HISTNGFP---FLRGRTHSYYRLKFNCSS 575 (585)
Q Consensus 521 V~PeyRGkGIGk~LL~~~~~~a~~~A~~~-gi~~~g~~---~~~~~a~~YYrlGF~~~~ 575 (585)
|+|+|||+|+|++|++.++ ++|++. +....... ........|.++||+..+
T Consensus 83 V~p~~rgkGig~~ll~~~~----~~a~~~~~~~~i~~~~~~~N~~a~~~y~k~GF~~~~ 137 (160)
T d2i6ca1 83 VAPAARGLGVARYLIGVME----NLAREQYKARLMKISCFNANAAGLLLYTQLGYQPRA 137 (160)
T ss_dssp ECGGGTTTTHHHHHHHHHH----HHHHHHHCCSEEEEEEETTCHHHHHHHHHTTCEEEE
T ss_pred eCHhHcCCcchhhhhHHHH----HHHHHhccccceeeecccccchhhhHHHhCCCEEEE
Confidence 9999999999999999999 777664 34433211 111223345689998764
|
| >d1ghea_ d.108.1.1 (A:) Tabtoxin resistance protein {Pseudomonas syringae [TaxId: 317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Tabtoxin resistance protein species: Pseudomonas syringae [TaxId: 317]
Probab=99.30 E-value=5.1e-12 Score=116.74 Aligned_cols=123 Identities=19% Similarity=0.244 Sum_probs=89.8
Q ss_pred ccccccccCHH----HHHHHHHHHHHc----cccccCCHHHHHhc---c--------CeEEEEEECCeEEEEEEEeeecc
Q 007903 450 GTRTAKVTDLS----GIKQIIQPLVES----GALVRRTDEELLKA---L--------DSFYVVEREGQIIACAALFPFFK 510 (585)
Q Consensus 450 ~IR~at~~D~~----~I~~Li~~~~~~----~~~~~~~~e~l~~~---i--------~~~~Va~~dg~IVG~~~l~~~~~ 510 (585)
+||+++++|+. .+.+++...... ++..+++.++.... + ..++|++.||++||++.+.+...
T Consensus 2 ~iR~~~~ed~~~~~~~l~~ll~d~~~~g~~~g~~~p~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~ 81 (170)
T d1ghea_ 2 QLRRVTAESFAHYRHGLAQLLFETVHGGASVGFMADLDMQQAYAWCDGLKADIAAGSLLLWVVAEDDNVLASAQLSLCQK 81 (170)
T ss_dssp EEEECCTTTHHHHHHHHHHHHHHHHHTTCCSSCCTTCCHHHHHHHHHTTHHHHHHTSEEEEEEEETTEEEEEEEEEECCS
T ss_pred ceEECCHHHHHHHHHHHHHHHHHHHhcCCccccCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEEECCEEEEEEEEeeccc
Confidence 58999999995 666665554443 24456666554321 1 36789999999999998875432
Q ss_pred ---CCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccce-eccccccc-ccCeeecCc
Q 007903 511 ---EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFL-RGRTHSYY-RLKFNCSSK 576 (585)
Q Consensus 511 ---~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~-~~~a~~YY-rlGF~~~~~ 576 (585)
...++|..++|+|+|||+|+|++|+++++ +++++.|+....+... +..+..|| ++||+..+.
T Consensus 82 ~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~----~~a~~~g~~~l~L~~~~n~~a~~fY~k~GF~~~g~ 148 (170)
T d1ghea_ 82 PNGLNRAEVQKLMVLPSARGRGLGRQLMDEVE----QVAVKHKRGLLHLDTEAGSVAEAFYSALAYTRVGE 148 (170)
T ss_dssp TTCTTEEEEEEEEECGGGTTSSHHHHHHHHHH----HHHHHTTCCEEEEEEETTSHHHHHHHHTTCEEEEE
T ss_pred cCCCcEEEEEEEEEcchhhcCCcHHHHHHHHH----HHHHHcCCceEeeecccchHHHHHHHHCCCEEEEE
Confidence 23589999999999999999999999999 9999999987544321 22334455 799998754
|
| >d1y7ra1 d.108.1.1 (A:1-133) Hypothetical protein SA2161 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein SA2161 species: Staphylococcus aureus [TaxId: 1280]
Probab=99.30 E-value=9.1e-12 Score=110.65 Aligned_cols=110 Identities=11% Similarity=0.090 Sum_probs=81.0
Q ss_pred CHHHHHHHHHHHHHccccccCCHHHHHhcc---CeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCCcCCcHHHHH
Q 007903 458 DLSGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKL 534 (585)
Q Consensus 458 D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i---~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGkGIGk~L 534 (585)
|.+++.+| .......+++.+.....+ ..++++.++|++||++.+.. .....++|..++|+|+|||+|+|++|
T Consensus 10 ~~e~~~~L----r~~~g~~~~s~e~~~~~l~~s~~~~~~~~~~~~vG~~~~~~-~~~~~~~i~~l~V~p~~rg~GiG~~L 84 (133)
T d1y7ra1 10 TCEDYCAL----RINAGMSPKTREAAEKGLPNALFTVTLYDKDRLIGMGRVIG-DGGTVFQIVDIAVLKSYQGQAYGSLI 84 (133)
T ss_dssp CHHHHHHH----HHHTTCCCCCHHHHHHHGGGCSEEEEEEETTEEEEEEEEEE-CSSSEEEEEEEEECGGGCSSSHHHHH
T ss_pred CHHHHHHH----HHHcCcCCCCHHHHHHHhcCCeEEEEEEECCEEEEEEEEEe-ccCCEEEEEEEEEeecccchHHHHHH
Confidence 45555555 222334456777776665 35678889999999998863 45678999999999999999999999
Q ss_pred HHHHHhhhHHHHHHcCCcccCccc-eeccccccc-ccCeeecCc
Q 007903 535 LGLCIWPLLSETRYDHISTNGFPF-LRGRTHSYY-RLKFNCSSK 576 (585)
Q Consensus 535 L~~~~~~a~~~A~~~gi~~~g~~~-~~~~a~~YY-rlGF~~~~~ 576 (585)
|++++ ++++++++....+.. -...+..|| ++||+..+.
T Consensus 85 l~~~~----~~~~~~g~~~~~l~~~a~~~a~~fY~k~GF~~~~~ 124 (133)
T d1y7ra1 85 MEHIM----KYIKNVSVESVYVSLIADYPADKLYVKFGFMPTEP 124 (133)
T ss_dssp HHHHH----HHHHHHCCTTCEEEEEEETTHHHHHHTTTCEECTT
T ss_pred HHHHH----HHHHHcCCCEEEEEEcCChHHHHHHHHCCCEEeCC
Confidence 99999 999999987643222 123445555 799998754
|
| >d1s3za_ d.108.1.1 (A:) Aminoglycoside N-acetyltransferase AAC(6')-IY {Salmonella enteritidis [TaxId: 149539]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Aminoglycoside N-acetyltransferase AAC(6')-IY species: Salmonella enteritidis [TaxId: 149539]
Probab=99.30 E-value=2.5e-12 Score=114.65 Aligned_cols=123 Identities=13% Similarity=0.020 Sum_probs=87.3
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHHhcc----CeEEEEEECCeEEEEEEEeeec-------cCCceEEe
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFF-------KEKCGEVA 517 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i----~~~~Va~~dg~IVG~~~l~~~~-------~~~~aeI~ 517 (585)
++||+++++|++++.+|...+...... ......+...+ ..++++..+++++|++.+.... ....++|.
T Consensus 3 m~Ir~~~~~d~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~va~~~~~~vG~~~~~~~~~~~~~~~~~~~~~i~ 81 (147)
T d1s3za_ 3 MDIRQMNKTHLEHWRGLRKQLWPGHPD-DAHLADGEEILQADHLASFIAMADGVAIGFADASIRHDYVNGCDSSPVVFLE 81 (147)
T ss_dssp EEEEECCGGGHHHHHHHHHHHSTTSCH-HHHHHHHHHHHHCSSEEEEEEEETTEEEEEEEEEEECSCCTTCSSSSEEEEE
T ss_pred eEEEECCHHHHHHHHHHHHHHCCCCCc-HHHHHHHHHHhhCCCcEEEEEEECCEEEEEEEEEeecCcccccCCCCeEEEE
Confidence 679999999999999996654322211 11112222222 4568889999999999876422 23568999
Q ss_pred eEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee--cccc-cccccCeeecCc
Q 007903 518 AIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR--GRTH-SYYRLKFNCSSK 576 (585)
Q Consensus 518 ~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~--~~a~-~YYrlGF~~~~~ 576 (585)
.|+|+|+|||+|||++||++++ ++|++.|+....+.... ..+. .|.++||+..+.
T Consensus 82 ~l~V~~~~rg~Gig~~Ll~~~~----~~a~~~g~~~i~l~~~~~N~~a~~fY~k~GF~~~~~ 139 (147)
T d1s3za_ 82 GIFVLPSFRQRGVAKQLIAAVQ----RWGTNKGCREMASDTSPENTISQKVHQALGFEETER 139 (147)
T ss_dssp EEEECGGGCSSSHHHHHHHHHH----HHHHHTTCSEEEEEECTTCHHHHHHHHHTTCEEEEE
T ss_pred EEEECHHHcCCcHHHHHHHHHH----HHhhhccccceEEEEcCCCHHHHHHHHHCCCEEECe
Confidence 9999999999999999999999 99999999875433222 2233 455799986654
|
| >d1mk4a_ d.108.1.1 (A:) Hypothetical protein YqiY {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein YqiY species: Bacillus subtilis [TaxId: 1423]
Probab=99.29 E-value=8.9e-13 Score=119.88 Aligned_cols=123 Identities=13% Similarity=0.182 Sum_probs=88.4
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHHhcc-CeEEEEEECCeEEEEEEEeeec-cCCceEEeeEEEccCCc
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL-DSFYVVEREGQIIACAALFPFF-KEKCGEVAAIGVSPECR 526 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i-~~~~Va~~dg~IVG~~~l~~~~-~~~~aeI~~L~V~PeyR 526 (585)
++||+++++|++.|.++++.............+.+.... ...||++.+|++|||+...... ....+++..++|+|+||
T Consensus 2 m~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~~r 81 (157)
T d1mk4a_ 2 MDIRTITSSDYEMVTSVLNEWWGGRQLKEKLPRLFFEHFQDTSFITSEHNSMTGFLIGFQSQSDPETAYIHFSGVHPDFR 81 (157)
T ss_dssp CEEEECCGGGHHHHHHHTTTSSTTCCCSCCCCTHHHHHCGGGCEEEESSSSEEEEEEEEECSSSTTEEEEEEEEECTTSC
T ss_pred cEEEeCCHHHHHHHHHHHHHHhcCCchhhHHHHhhhhccCceEEEEEECCEEEEEeeeeeeccCCccceeeEEEEEHHHc
Confidence 579999999999999997654322222111122222222 5578899999999997765432 34678999999999999
Q ss_pred CCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee--ccccccc-ccCeeecC
Q 007903 527 GQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR--GRTHSYY-RLKFNCSS 575 (585)
Q Consensus 527 GkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~--~~a~~YY-rlGF~~~~ 575 (585)
|+|+|++|+++++ +++++.|+......... .++..|| ++||+...
T Consensus 82 g~Gig~~Ll~~~~----~~~~~~g~~~v~~~~~~~N~~a~~~y~k~GF~~~~ 129 (157)
T d1mk4a_ 82 KMQIGKQLYDVFI----ETVKQRGCTRVKCVTSPVNKVSIAYHTKLGFDIEK 129 (157)
T ss_dssp HHHHHHHHHHHHH----HHHHTTTCCEEEEEECTTCHHHHHHHHHTTCEECC
T ss_pred CCcccchHHHHHH----HhhccccceEEEEEeccchHHHHHHHHHCCCEEee
Confidence 9999999999999 99999999875433222 2344455 79998764
|
| >d1y9wa1 d.108.1.1 (A:1-140) Probable acetyltransferase BC2806 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase BC2806 species: Bacillus cereus [TaxId: 1396]
Probab=99.29 E-value=2.1e-12 Score=115.66 Aligned_cols=117 Identities=14% Similarity=0.042 Sum_probs=87.2
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHHhcc--CeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCCc
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECR 526 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i--~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyR 526 (585)
..|+.++..|.+.|.+.+......... +.+.... ..++|+++++++||++.... ....++|..++|+|+||
T Consensus 4 ~~i~~~t~~~~~~I~~~~~~~~~~~~~-----~~~~~~~~~~~~~v~~~~~~ivG~~~~~~--~~~~~~i~~l~V~~~~r 76 (140)
T d1y9wa1 4 KHIENGTRIEGEYIKNKVIQYNMSILT-----DEVKQPMEEVSLVVKNEEGKIFGGVTGTM--YFYHLHIDFLWVDESVR 76 (140)
T ss_dssp CEEEECCHHHHHHHHHHHHHHHHHTSC-----GGGCCCCEEEEEEEECTTCCEEEEEEEEE--ETTEEEEEEEEECGGGT
T ss_pred chhcCCcHHHHHHHHHHHHHHHHhhCh-----HHHhCcccceEEEEEeCCCcEEEEEEEEE--ecCeeEEEEEEECcccc
Confidence 568899999999888875544333221 1122222 24677788999999998874 34578999999999999
Q ss_pred CCcHHHHHHHHHHhhhHHHHHHcCCcccCccceeccccccc-ccCeeecCc
Q 007903 527 GQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYY-RLKFNCSSK 576 (585)
Q Consensus 527 GkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YY-rlGF~~~~~ 576 (585)
|+|+|++||++++ ++|++.|+........+..+..|| |+||+..+.
T Consensus 77 g~GiG~~Ll~~~~----~~a~~~g~~~i~l~~~n~~A~~fY~k~GF~~~g~ 123 (140)
T d1y9wa1 77 HDGYGSQLLHEIE----GIAKEKGCRLILLDSFSFQAPEFYKKHGYREYGV 123 (140)
T ss_dssp TTTHHHHHHHHHH----HHHHHTTCCEEEEEEEGGGCHHHHHHTTCEEEEE
T ss_pred CCCcHHHHHHHHH----HHHHhccceEEEEeechhhHHHHHHhCCCEEEEE
Confidence 9999999999999 999999998754443344455555 799998753
|
| >d1cjwa_ d.108.1.1 (A:) Serotonin N-acetyltranferase {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Serotonin N-acetyltranferase species: Sheep (Ovis aries) [TaxId: 9940]
Probab=99.29 E-value=6.4e-12 Score=114.28 Aligned_cols=125 Identities=16% Similarity=0.118 Sum_probs=90.0
Q ss_pred cccccccccCHHHHHHHHHHHHH-ccccccCCHHHHHhcc----CeEEEEEECCeEEEEEEEeee--------------c
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVE-SGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPF--------------F 509 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~-~~~~~~~~~e~l~~~i----~~~~Va~~dg~IVG~~~l~~~--------------~ 509 (585)
.+||+++++|+++|.+|...... .....+++.+.+...+ ..+++++.+++++|++..... .
T Consensus 6 ~~iR~~t~~D~~~l~~l~~~~f~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~ 85 (166)
T d1cjwa_ 6 NEFRCLTPEDAAGVFEIEREAFISVSGNCPLNLDEVQHFLTLCPELSLGWFVEGRLVAFIIGSLWDEERLTQESLALHRP 85 (166)
T ss_dssp SEEECCCGGGHHHHHHHHHHHTHHHHSCCSCCHHHHHHHHHHCGGGEEEEEETTEEEEEEEEEEECSSSCCGGGGGCCCT
T ss_pred HHhccCCHHHHHHHHHHHHHhCCcccccCcccHHHHhhhhhcCCceEEEEEECCceeeeecccccccccchhhhhhcccC
Confidence 57999999999999999654321 2223456777666554 568899999999999876421 1
Q ss_pred cCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHc-CCcccCccceecccccccccCeeecCcc
Q 007903 510 KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYD-HISTNGFPFLRGRTHSYYRLKFNCSSKS 577 (585)
Q Consensus 510 ~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~-gi~~~g~~~~~~~a~~YYrlGF~~~~~~ 577 (585)
..+.++|..|+|+|+|||+|+|++||+.++ +++++. ++....+.........|.|+||+..+.+
T Consensus 86 ~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~----~~~~~~~~~~~i~l~~~~~ai~fY~k~GF~~~G~~ 150 (166)
T d1cjwa_ 86 RGHSAHLHALAVHRSFRQQGKGSVLLWRYL----HHVGAQPAVRRAVLMCEDALVPFYQRFGFHPAGPC 150 (166)
T ss_dssp TCCEEEEEEEEECTTSTTSSHHHHHHHHHH----HHHHTSTTCCEEEEEECGGGHHHHHTTTEEEEEEC
T ss_pred CCCEEEEEEEEECHHHccCCHHHHHHHHHH----HHHHHhCCCceEEEecCHHHHHHHHHCCCEEEcce
Confidence 235789999999999999999999999999 776665 4443322222223334558999998754
|
| >d1yx0a1 d.108.1.1 (A:1-151) Hypothetical protein YsnE {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein YsnE species: Bacillus subtilis [TaxId: 1423]
Probab=99.29 E-value=1.6e-12 Score=118.54 Aligned_cols=121 Identities=15% Similarity=0.178 Sum_probs=86.0
Q ss_pred cccccccccCHHHHHHHHHHHHHcccc-c------cCCHHHHHhccCeEEEEEECCeEEEEEEEeeeccCCceEEeeEEE
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGAL-V------RRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGV 521 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~-~------~~~~e~l~~~i~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V 521 (585)
+.||..+.+| +++..|+......... . ..+.+.+...-..+|+++.||++||++.+.+ ..++.++|..++|
T Consensus 1 M~I~~~~~~~-~~i~~L~~~~~~~~~~~~p~e~~~~l~~~~l~~~~~~~~va~~~~~~vG~~~~~~-~~~~~~~i~~~~V 78 (151)
T d1yx0a1 1 MHIKIDDLTG-RQVVSLVNEHLHSMTLMSPPESIHALGLEKLRGPEITFWSAWEGDELAGCGALKE-LDTRHGEIKSMRT 78 (151)
T ss_dssp CCEEEESSCC-HHHHHHHHHSSCCCCSCCCSSCCCCSCHHHHSSSSCEEEEEECSSSEEEEEEEEE-EETTEEECCCCCC
T ss_pred CeeEECCCCC-HHHHHHHHHHHHHHHhcCCchhhhccCHhHccCCCeEEEEEEECCEEEEEEEEEe-ccCceEEEEeeee
Confidence 3577777777 6777775432222110 0 1234445444467999999999999999874 4567899999999
Q ss_pred ccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccc----eecccc-cccccCeeecC
Q 007903 522 SPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPF----LRGRTH-SYYRLKFNCSS 575 (585)
Q Consensus 522 ~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~----~~~~a~-~YYrlGF~~~~ 575 (585)
+|+|||+|+|++||++++ ++|++.|++...+.. .+..+. .|+|+||+..+
T Consensus 79 ~p~~Rg~Glg~~Ll~~~~----~~A~~~g~~~i~L~t~~~~~n~~A~~lY~k~GF~~~~ 133 (151)
T d1yx0a1 79 SASHLRKGVAKQVLQHII----EEAEKRGYERLSLETGSMASFEPARKLYESFGFQYCE 133 (151)
T ss_dssp STTTCCSCHHHHHHHHHH----HHHHHHTCSCEECCCSSCTTHHHHHHHHHTTSEEECC
T ss_pred CHHHHhCChhHHHHHHHH----HHHHHCCCcEEEEEeccccchHHHHHHHHHcCCEECC
Confidence 999999999999999999 999999998754321 112234 45589999754
|
| >d1yvoa1 d.108.1.1 (A:4-172) Hypothetical protein PA4866 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein PA4866 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.28 E-value=6.7e-12 Score=115.02 Aligned_cols=122 Identities=20% Similarity=0.180 Sum_probs=86.8
Q ss_pred ccccccccCHHHHHHHHHHHHHccc----cccCCHHHHHhcc-------CeEEEE-EECCeEEEEEEEeeeccC---Cce
Q 007903 450 GTRTAKVTDLSGIKQIIQPLVESGA----LVRRTDEELLKAL-------DSFYVV-EREGQIIACAALFPFFKE---KCG 514 (585)
Q Consensus 450 ~IR~at~~D~~~I~~Li~~~~~~~~----~~~~~~e~l~~~i-------~~~~Va-~~dg~IVG~~~l~~~~~~---~~a 514 (585)
+||+++++|++.|.+|++....... ..+.+.+++...+ ..++|+ +.+++++|++.+.+.... +..
T Consensus 1 tiR~a~~~D~~~i~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~vG~~~~~~~~~~~~~~~~ 80 (169)
T d1yvoa1 1 SIRDAGVADLPGILAIYNDAVGNTTAIWNETPVDLANRQAWFDTRARQGYPILVASDAAGEVLGYASYGDWRPFEGFRGT 80 (169)
T ss_dssp CEEECCGGGHHHHHHHHHHHHHHCSSSSCCSCCCHHHHHHHHHHHHHHTCCEEEEECTTCCEEEEEEEEESSSSGGGTTE
T ss_pred CcccCcHHHHHHHHHHHHHHHhhcceecccCCCCHHHHHHHHHhhhccCCceEEEEecCCCEEEeeccccccccccccce
Confidence 5899999999999999877654332 1234555544433 335554 567899999988754321 345
Q ss_pred EEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee--cccc-cccccCeeecC
Q 007903 515 EVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR--GRTH-SYYRLKFNCSS 575 (585)
Q Consensus 515 eI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~--~~a~-~YYrlGF~~~~ 575 (585)
.+..++|+|+|||+|+|++|++.++ ++++++|+......... ..+. .|.++||+..+
T Consensus 81 ~~~~i~v~p~~rg~G~g~~l~~~~~----~~a~~~g~~~l~~~v~~~N~~s~~~y~k~GF~~~g 140 (169)
T d1yvoa1 81 VEHSVYVRDDQRGKGLGVQLLQALI----ERARAQGLHVMVAAIESGNAASIGLHRRLGFEISG 140 (169)
T ss_dssp EEEEEEECGGGTTSSHHHHHHHHHH----HHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEEE
T ss_pred EEEEeecChhhhcCCeeeeeeeeec----cccccccceEEEEEeccCcHHHHHHHhcCCcEEEE
Confidence 6678999999999999999999999 99999999875322222 2233 45579999764
|
| >d1ygha_ d.108.1.1 (A:) Catalytic domain of GCN5 histone acetyltransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Catalytic domain of GCN5 histone acetyltransferase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.26 E-value=6.9e-12 Score=115.83 Aligned_cols=121 Identities=12% Similarity=0.135 Sum_probs=82.1
Q ss_pred ccccccccCHHHHHHHHHH---HHHccccccCCHHHHHhcc-----CeEEEEEECCeEEEEEEEeeeccCCceEEeeEEE
Q 007903 450 GTRTAKVTDLSGIKQIIQP---LVESGALVRRTDEELLKAL-----DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGV 521 (585)
Q Consensus 450 ~IR~at~~D~~~I~~Li~~---~~~~~~~~~~~~e~l~~~i-----~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V 521 (585)
++|.++.+|.++-..++.. ..... +..+..+.+...+ ..++|++.++++||++.+.+....+.++|..++|
T Consensus 3 ~~r~i~~~~~~e~~~~L~~~~~if~~~-lp~~~~~~i~r~~~d~~~~~~~v~~~~~~iVG~~~~~~~~~~~~aeI~~laV 81 (164)
T d1ygha_ 3 EFRVVNNDNTKENMMVLTGLKNIFQKQ-LPKMPKEYIARLVYDRSHLSMAVIRKPLTVVGGITYRPFDKREFAEIVFCAI 81 (164)
T ss_dssp EEEEECCSSCHHHHHHHHHHHHHHHHH-CTTSCHHHHHHHHHCTTCEEEEEEETTTEEEEEEEEEEEGGGTEEEEEEEEE
T ss_pred EEEEEcCCCCHHHHHHHHHHHHHHHHH-cCCccHHHHHHHHhccCCceEEEEEeCCeEEEEEEEEecCCCCEEEEEEEEE
Confidence 4566676665554444322 22222 2233455555433 4688899999999999887666667899999999
Q ss_pred ccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceeccc-ccccccCeeecC
Q 007903 522 SPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRT-HSYYRLKFNCSS 575 (585)
Q Consensus 522 ~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a-~~YYrlGF~~~~ 575 (585)
+|+|||+|+|++||++++ +.+++.+....-+......+ ++|.++||+...
T Consensus 82 ~p~~rg~GiG~~L~~~l~----~~~k~~~~~~~~~~~~n~~A~~fY~k~GF~~~~ 132 (164)
T d1ygha_ 82 SSTEQVRGYGAHLMNHLK----DYVRNTSNIKYFLTYADNYAIGYFKKQGFTKEI 132 (164)
T ss_dssp CTTCCCTTHHHHHHHHHH----HHHHHHSCCCEEEEEECGGGHHHHHHTTCBSSC
T ss_pred CchhccCHHHHHHHHHHH----HHHHhhCceEEEEEecCHHHHHHHHhcCCEEec
Confidence 999999999999999999 88877765443332222333 445579997653
|
| >d1n71a_ d.108.1.1 (A:) Aminoglycoside 6'-N-acetyltransferase {Enterococcus faecium [TaxId: 1352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Aminoglycoside 6'-N-acetyltransferase species: Enterococcus faecium [TaxId: 1352]
Probab=99.26 E-value=9.6e-12 Score=116.09 Aligned_cols=98 Identities=10% Similarity=0.026 Sum_probs=72.9
Q ss_pred ccccccccCH---HHHHHHHHHHHHccccccCC---HHHHHhcc---CeEEEEEECCeEEEEEEEeeeccCCceEEeeEE
Q 007903 450 GTRTAKVTDL---SGIKQIIQPLVESGALVRRT---DEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIG 520 (585)
Q Consensus 450 ~IR~at~~D~---~~I~~Li~~~~~~~~~~~~~---~e~l~~~i---~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~ 520 (585)
.||.++.+|. +++.++.+ ..+...+. .+.+.+.. ..++++..+++++|++.+....+...++|..|+
T Consensus 2 iI~e~~~~~p~~~~~l~~l~~----~~~p~~~~~~~~~~~~~~~~~~~~~~va~~~~~iig~~~~~~~~~~~~~~I~~i~ 77 (180)
T d1n71a_ 2 IISEFDRNNPVLKDQLSDLLR----LTWPEEYGDSSAEEVEEMMNPERIAVAAVDQDELVGFIGAIPQYGITGWELHPLV 77 (180)
T ss_dssp EEEECCTTCHHHHHHHHHHHH----HHCTTTSSSTHHHHHHHHTCTTSEEEEEEETTEEEEEEEEEEEETTTEEEEEEEE
T ss_pred eEEEccccChHHHHHHHHHHH----HhCCcccCcchHHHHHHHhCCCCEEEEEEECCeEEEEEEEEEecCCCEEEEEEEE
Confidence 5777777774 55655533 22322221 23333333 578899999999999988765566789999999
Q ss_pred EccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccC
Q 007903 521 VSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNG 555 (585)
Q Consensus 521 V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g 555 (585)
|+|+|||+|+|++||++++ ++|++.|+....
T Consensus 78 V~p~~rg~GiG~~Ll~~~~----~~a~~~G~~~i~ 108 (180)
T d1n71a_ 78 VESSRRKNQIGTRLVNYLE----KEVASRGGITIY 108 (180)
T ss_dssp ECTTSCSSSHHHHHHHHHH----HHHHHTTCCEEE
T ss_pred EchHHhccHHHHHHHHHHH----HHHHHCCCCEEE
Confidence 9999999999999999999 999999987653
|
| >d2ae6a1 d.108.1.1 (A:1-161) Putative acetyltransferase EF0244 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Putative acetyltransferase EF0244 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.26 E-value=4.4e-12 Score=114.92 Aligned_cols=124 Identities=15% Similarity=0.168 Sum_probs=86.8
Q ss_pred cccccccccCHHHHHHHHHHHHHcccc----ccCCHHHHHhcc--CeEEEEEECCeEEEEEEEeeecc---CCceEEeeE
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGAL----VRRTDEELLKAL--DSFYVVEREGQIIACAALFPFFK---EKCGEVAAI 519 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~----~~~~~e~l~~~i--~~~~Va~~dg~IVG~~~l~~~~~---~~~aeI~~L 519 (585)
.+||+++++|++.|.+|.+........ .++....+...+ ..++|++.+|++||++.+.+... ....++..+
T Consensus 5 i~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~vG~~~~~~~~~~~~~~~~~~~~~ 84 (161)
T d2ae6a1 5 LTIRLVAEADWPALHALDQIIWTKKNTPAEIQPLSLAAYQEKMKDETIFVAISGQQLAGFIEVHPPTSLAAHQKQWLLSI 84 (161)
T ss_dssp EEEEECCGGGHHHHHHHHTTC-------------CCSHHHHHTTSSEEEEEEETTEEEEEEEEECSSSCGGGTTEEEEEE
T ss_pred eEEEeCCHHHHHHHHHHHHHHhhhcCCcccCChhhHHHHHHhCCCCcEEEEEECCEEEEEEeecccccccccceEEEEEE
Confidence 679999999999999996543322211 112223333333 67889999999999998875322 245788999
Q ss_pred EEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee--cccc-cccccCeeecCc
Q 007903 520 GVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR--GRTH-SYYRLKFNCSSK 576 (585)
Q Consensus 520 ~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~--~~a~-~YYrlGF~~~~~ 576 (585)
+|+|+|||+|+|++|++.++ +++++.|+......... ..+. .|.++||+..+.
T Consensus 85 ~v~~~~rg~Gig~~ll~~l~----~~~~~~g~~~i~~~~~~~N~~a~~~y~~~GF~~~g~ 140 (161)
T d2ae6a1 85 GVSPDFQDQGIGGSLLSYIK----DMAEISGIHKLSLRVMATNQEAIRFYEKHGFVQEAH 140 (161)
T ss_dssp EECGGGTTSSHHHHHHHHHH----HHHHHHTCCEEEEEEETTCHHHHHHHHHTTCEEEEE
T ss_pred EEeeccccccccccchhhee----eccccccchhheehhccccHHHHHHHHHCCCEEEEE
Confidence 99999999999999999999 88888899875332221 2233 455799997653
|
| >d2euia1 d.108.1.1 (A:1-153) Probable acetyltransferase PA4026 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase PA4026 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.25 E-value=3.5e-12 Score=114.74 Aligned_cols=123 Identities=18% Similarity=0.158 Sum_probs=87.3
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHHhc----c----C--eEEEEEECCeEEEEEEEeeecc----CCce
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKA----L----D--SFYVVEREGQIIACAALFPFFK----EKCG 514 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~----i----~--~~~Va~~dg~IVG~~~l~~~~~----~~~a 514 (585)
++||+|+++|++.|.+|+..+.... ..+...+..... + . .+++++.++++||++.+.+... .+.+
T Consensus 1 M~Ir~a~~~D~~~i~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~ 79 (153)
T d2euia1 1 MRIVQATLEHLDLLAPLFVKYREFY-GMLSYPESSRKFLEKRLRRKESVIYLALADEEDRLLGFCQLYPSFSSLSLKRVW 79 (153)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHTCSEEEEEECSSSCCEEEEEEEEEEEETTTTEEEE
T ss_pred CEEEECCHHHHHHHHHHHHHHHHHh-cCCCCHHHHHHHHHHHHhCCCCcEEEEEEecCCeEEEEEeeecccccccccceE
Confidence 4799999999999999987654321 112222322221 1 2 3445567899999998864322 3567
Q ss_pred EEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccce--eccccccc-ccCeeecCc
Q 007903 515 EVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFL--RGRTHSYY-RLKFNCSSK 576 (585)
Q Consensus 515 eI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~--~~~a~~YY-rlGF~~~~~ 576 (585)
+|..++|+|++||+|+|++||++++ ++|++.|+....+... +..++.|| ++||+..+.
T Consensus 80 ~i~~~~V~~~~r~~Gig~~Ll~~~~----~~ak~~g~~~i~l~~~~~N~~a~~~Y~k~GF~~~~~ 140 (153)
T d2euia1 80 ILNDIYVAEEARRQLVADHLLQHAK----QMARETHAVRMRVSTSVDNEVAQKVYESIGFREDQE 140 (153)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHHH----HHHHHTTEEEEEEEEETTCHHHHHHHHTTTCBCCCS
T ss_pred EecceeeeecccCcchhhHHHHHHh----hhHHHhhhccceEEecCCCHHHHHHHHHCCCEEcce
Confidence 8999999999999999999999999 9999999987544332 23445555 799997654
|
| >d1u6ma_ d.108.1.1 (A:) Putative acetyltransferase EF0945 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Putative acetyltransferase EF0945 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.24 E-value=1.2e-11 Score=114.01 Aligned_cols=123 Identities=20% Similarity=0.230 Sum_probs=88.7
Q ss_pred ccccccccCHHHHHHHHHHHHHcccc---ccCCHHHHHhcc-------------CeEEEEEECCeEEEEEEEeeecc---
Q 007903 450 GTRTAKVTDLSGIKQIIQPLVESGAL---VRRTDEELLKAL-------------DSFYVVEREGQIIACAALFPFFK--- 510 (585)
Q Consensus 450 ~IR~at~~D~~~I~~Li~~~~~~~~~---~~~~~e~l~~~i-------------~~~~Va~~dg~IVG~~~l~~~~~--- 510 (585)
.||+|+.+|+++|.+|+.....+... .....+.+...+ ..++|++.+++++|+....+...
T Consensus 2 ~IR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~e~~~~i~g~~~~~~~~~~~~ 81 (189)
T d1u6ma_ 2 LIRSATKEDGQAIARLVLVILKDMELPILEEVSEEQMIDLLAEATAYPTYRYGYQRILVYEHAGEVAGIAVGYPAEDEKI 81 (189)
T ss_dssp EEEECCGGGHHHHHHHHHHHHHHSCCGGGGTSCHHHHHHHHHHHHTSTTSTTCGGGEEEEEETTEEEEEEEEEEGGGTTT
T ss_pred EeeeCcHHHHHHHHHHHHHHHHHhhhhhccCCCHHHHHHHHHHHHhCcccccccceEEEEEEcCeEEEEEEEeccccccc
Confidence 58999999999999998776554321 122333322211 24789999999999988764211
Q ss_pred ---------------------------CCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceec--
Q 007903 511 ---------------------------EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRG-- 561 (585)
Q Consensus 511 ---------------------------~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~-- 561 (585)
++.++|..|+|+|+|||+|+|++||++++ ++|++.|+....+.....
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~----~~a~~~g~~~~~l~v~~~N~ 157 (189)
T d1u6ma_ 82 IDEPLREVFKKHGLAEDVRLFIEEETLPNEWYLDTISVDERFRGMGIGSKLLDALP----EVAKASGKQALGLNVDFDNP 157 (189)
T ss_dssp SSHHHHHHHHHTTSCTTCCCCCCCCCCTTEEEEEEEEECGGGTTSSHHHHHHHTHH----HHHHTTTCSEEEEEEETTCH
T ss_pred cchhhhhhhhhcccccccccccccccCCCEEEEEEEEECHHHcCCCcCcchhHHHH----HHHHhcCCceeEEEEcCCCH
Confidence 12478999999999999999999999999 999999988754333222
Q ss_pred ccc-cccccCeeecCc
Q 007903 562 RTH-SYYRLKFNCSSK 576 (585)
Q Consensus 562 ~a~-~YYrlGF~~~~~ 576 (585)
.+. .|.++||++.+.
T Consensus 158 ~a~~~Yek~GF~~~~~ 173 (189)
T d1u6ma_ 158 GARKLYASKGFKDVTT 173 (189)
T ss_dssp HHHHHHHTTTCEEEEE
T ss_pred HHHHHHHHCCCEEEEE
Confidence 233 455899998854
|
| >d2cy2a1 d.108.1.1 (A:1-174) Probable acetyltransferase TTHA1209 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase TTHA1209 species: Thermus thermophilus [TaxId: 274]
Probab=99.24 E-value=9.8e-12 Score=114.03 Aligned_cols=124 Identities=19% Similarity=0.175 Sum_probs=86.9
Q ss_pred cccccccccCHHHHHHHHHHHHHcccc--c------cCCHHH----HHhcc------Ce-EEEEEECCeEEEEEEEeeec
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGAL--V------RRTDEE----LLKAL------DS-FYVVEREGQIIACAALFPFF 509 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~--~------~~~~e~----l~~~i------~~-~~Va~~dg~IVG~~~l~~~~ 509 (585)
+.||+++++|+++|.+|.+......+. . ..+.+. +.+.+ .. +++.+.++++|||+.+.+..
T Consensus 1 i~IR~a~~~D~~~i~~i~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~ 80 (174)
T d2cy2a1 1 VRIRRAGLEDLPGVARVLVDTWRATYRGVVPEAFLEGLSYEGQAERWAQRLKTPTWPGRLFVAESESGEVVGFAAFGPDR 80 (174)
T ss_dssp CCEEECCGGGHHHHHHHHHHHHHHHSBTTBCHHHHHHCCHHHHHHHHHHHHHCTTCCCEEEEEECTTSCEEEEEEEEECC
T ss_pred CEEEECCHHHHHHHHHHHHHHHHHHhcccCCHHHHhccChHHHHHHHHHHHhcCCCCceEEEEEEcCCEEEeeeeccccc
Confidence 369999999999999997765443221 1 122222 22222 23 44555678999999886533
Q ss_pred ----cCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee--ccccccc-ccCeeecCc
Q 007903 510 ----KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR--GRTHSYY-RLKFNCSSK 576 (585)
Q Consensus 510 ----~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~--~~a~~YY-rlGF~~~~~ 576 (585)
....++|..++|+|+|||+|+|++|++.++ ++|+++|+......... ..++.|| |+||+..+.
T Consensus 81 ~~~~~~~~~~i~~l~v~~~~rg~Gig~~ll~~~~----~~a~~~g~~~~~l~v~~~N~~a~~~y~k~GF~~~g~ 150 (174)
T d2cy2a1 81 ASGFPGYTAELWAIYVLPTWQRKGLGRALFHEGA----RLLQAEGYGRMLVWVLKENPKGRGFYEHLGGVLLGE 150 (174)
T ss_dssp SCSCTTCCEEEEEEEECGGGCSSSHHHHHHHHHH----HHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEEEE
T ss_pred cccccCCceEEEEEEEcHHHhhCCCchHHHHHHH----HHHHHcCCCeEEEEEeCCCHHHHHHHHHCCCEEEeE
Confidence 245789999999999999999999999999 99999999875443322 2234455 799998754
|
| >d1vkca_ d.108.1.1 (A:) Putative acetyltransferase PF0028 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Putative acetyltransferase PF0028 species: Pyrococcus furiosus [TaxId: 2261]
Probab=99.22 E-value=2e-11 Score=109.90 Aligned_cols=89 Identities=13% Similarity=0.112 Sum_probs=66.3
Q ss_pred eEEEE-EECCeEEEEEEEeeec----cCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccce--ec
Q 007903 489 SFYVV-EREGQIIACAALFPFF----KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFL--RG 561 (585)
Q Consensus 489 ~~~Va-~~dg~IVG~~~l~~~~----~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~--~~ 561 (585)
.++++ +.+|++|||+.+.+.. ..+.++|..|+|+|+|||+|+|++||++++ ++|+++|+....+... +.
T Consensus 53 ~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~~~i~~l~V~~~~Rg~GiG~~Ll~~~~----~~a~~~g~~~i~L~v~~~n~ 128 (149)
T d1vkca_ 53 KFFVALNERSELLGHVWICITLDTVDYVKIAYIYDIEVVKWARGLGIGSALLRKAE----EWAKERGAKKIVLRVEIDNP 128 (149)
T ss_dssp EEEEEEETTCCEEEEEEEEEEECTTTCSEEEEEEEEEECGGGTTSSHHHHHHHHHH----HHHHHTTCSCEEECCCTTCT
T ss_pred eEEEEEecCCeEEEEEEEEeccCCCCCCcEEEEEEEEECHHHcCCChHHHHHHHHH----HHHHHCCCCEEEEEECCCCH
Confidence 45555 4578999999886432 235689999999999999999999999999 9999999987544321 22
Q ss_pred ccccccccCeeecCcccccc
Q 007903 562 RTHSYYRLKFNCSSKSFHIS 581 (585)
Q Consensus 562 ~a~~YYrlGF~~~~~~~~~~ 581 (585)
+.+.|.++||+..+..|..+
T Consensus 129 A~~~Y~k~GF~~~~~~m~k~ 148 (149)
T d1vkca_ 129 AVKWYEERGYKARALIMEKP 148 (149)
T ss_dssp HHHHHHHTTCCCCCCCCCCC
T ss_pred HHHHHHHCCCEEEEEEEEEE
Confidence 33345579999877666543
|
| >d1vhsa_ d.108.1.1 (A:) Putative phosphinothricin acetyltransferase YwnH {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Putative phosphinothricin acetyltransferase YwnH species: Bacillus subtilis [TaxId: 1423]
Probab=99.21 E-value=1e-11 Score=113.25 Aligned_cols=123 Identities=19% Similarity=0.225 Sum_probs=82.8
Q ss_pred cccccccccCHHHHHHHHHHHHHccc----cccCCHHHHH----hcc--CeEEEE-EECCeEEEEEEEeeeccC---Cce
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGA----LVRRTDEELL----KAL--DSFYVV-EREGQIIACAALFPFFKE---KCG 514 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~----~~~~~~e~l~----~~i--~~~~Va-~~dg~IVG~~~l~~~~~~---~~a 514 (585)
++||+++++|+++|.+|++....... ..+.+.+... ... ..++++ ..+|++||++.+.++... ...
T Consensus 2 ~~iR~a~~~D~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~ 81 (165)
T d1vhsa_ 2 LTLRLAEHRDLEAVVAIYNSTIASRMVTADTEPVTPEDRMEWFSGHTESRPLYVAEDENGNVAAWISFETFYGRPAYNKT 81 (165)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHTTTSSCSCSSCCCGGGGHHHHHTCCSSSCEEEEECTTSCEEEEEEEEESSSSGGGTTE
T ss_pred EEEEeCCHHHHHHHHHHHHHHHhhcccccccCCCCHHHHHHHHHhccccCCeEEEEecCCceEeeeeeeeccccccccce
Confidence 57999999999999999876554332 1122333222 222 334555 457899999988753321 122
Q ss_pred EEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccce---ecccccccccCeeecC
Q 007903 515 EVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFL---RGRTHSYYRLKFNCSS 575 (585)
Q Consensus 515 eI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~---~~~a~~YYrlGF~~~~ 575 (585)
....++|+|+|||+|+|++|+++++ ++|+++|+.+...... ......|.++||+..+
T Consensus 82 ~~~~~~v~~~~rg~Gig~~l~~~~~----~~~~~~g~~~i~~~v~~~N~~a~~~y~k~GF~~~g 141 (165)
T d1vhsa_ 82 AEVSIYIDEACRGKGVGSYLLQEAL----RIAPNLGIRSLMAFIFGHNKPSLKLFEKHGFAEWG 141 (165)
T ss_dssp EEEEEEECGGGCSSSHHHHHHHHHH----HHGGGGTCSEEEEEEETTCHHHHHHHHHTTCEEEE
T ss_pred EEEeeecCchhhcccccchhhhhhh----hhhccccceeEEEEEecCCHHHHHHHHHCCCEEEE
Confidence 3346999999999999999999999 8899999987532221 1233345589998754
|
| >d1qsma_ d.108.1.1 (A:) Histone acetyltransferase HPA2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Histone acetyltransferase HPA2 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.21 E-value=1.6e-11 Score=109.83 Aligned_cols=121 Identities=15% Similarity=0.115 Sum_probs=85.1
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHHh---c----c----CeEEEEEECCeEEEEEEEeeecc----CCc
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLK---A----L----DSFYVVEREGQIIACAALFPFFK----EKC 513 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~---~----i----~~~~Va~~dg~IVG~~~l~~~~~----~~~ 513 (585)
++||+++++|.+.+.+|++.+.... ..+.+.+.... . . ..+++++.++.+||++.+.+... ...
T Consensus 3 i~IR~~~~~D~e~~~~L~~~y~~fy-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivg~~~~~~~~~~~~~~~~ 81 (150)
T d1qsma_ 3 ITVRFVTENDKEGWQRLWKSYQDFY-EVSFPDDLDDFNFGRFLDPNIKMWAAVAVESSSEKIIGMINFFNHMTTWDFKDK 81 (150)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHT-TCCCCHHHHHHHHHHHHCTTSCEEEEEEEESSSCCEEEEEEEEEECCTTCSSCE
T ss_pred eEEEECCHHHHHHHHHHHHHHHHHh-cccCchHHHHHHHHHHhCCCcccceeeeehhhcCcEEEEEEEeeccccccccch
Confidence 5799999999999999976544321 11223332211 1 1 22344456789999998864332 346
Q ss_pred eEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee--ccccccc-ccCeeec
Q 007903 514 GEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR--GRTHSYY-RLKFNCS 574 (585)
Q Consensus 514 aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~--~~a~~YY-rlGF~~~ 574 (585)
++|..++|+|++||+|+|++||++++ ++|+++|+....+.... ..+..|| ++||+..
T Consensus 82 ~~l~~l~v~~~~rg~GiG~~L~~~~~----~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~GFk~~ 141 (150)
T d1qsma_ 82 IYINDLYVDENSRVKGAGGKLIQFVY----DEADKLGTPSVYWCTDESNHRAQLLYVKVGYKAP 141 (150)
T ss_dssp EEEEEEEECGGGCSSSHHHHHHHHHH----HHHHHTTCCCEEEEEETTCHHHHHHHHHHEEECS
T ss_pred heehhhhhhhcccCccHHHHHHHHHH----hhhcccccccceeEEccCCHHHHHHHHHcCCCCc
Confidence 78999999999999999999999999 99999999886544332 2344455 7999854
|
| >d2jdca1 d.108.1.1 (A:2-146) Probable acetyltransferase YitI {Bacillus licheniformis [TaxId: 1402]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase YitI species: Bacillus licheniformis [TaxId: 1402]
Probab=99.19 E-value=2.4e-11 Score=109.73 Aligned_cols=89 Identities=17% Similarity=0.135 Sum_probs=70.3
Q ss_pred CeEEEEEECCeEEEEEEEeeec-----cCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceecc
Q 007903 488 DSFYVVEREGQIIACAALFPFF-----KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGR 562 (585)
Q Consensus 488 ~~~~Va~~dg~IVG~~~l~~~~-----~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~ 562 (585)
...+++..++++||++.+.... ....++|..|+|+|+|||+|+|++||++++ ++|++.|+....+.. +..
T Consensus 38 ~~h~~a~~~~~iVg~~~~~~~~~~~~~~~~~~~l~~l~V~~~~rg~GiG~~Ll~~~~----~~a~~~g~~~i~l~a-~~~ 112 (145)
T d2jdca1 38 AFHLGGYYGGKLISIASFHQAEHSELQGQKQYQLRGMATLEGYREQKAGSSLIKHAE----EILRKRGADLLWCNA-RTS 112 (145)
T ss_dssp CEEEEEEETTEEEEEEEEEECCCTTSCCSSEEEEEEEEECTTSTTSSHHHHHHHHHH----HHHHHTTCCEEEEEE-EGG
T ss_pred cEEEEEEeCCEEEEEEEEEeccccccCCCCeEEEEEEEEeHHHhhhhHHHHHHHHHH----HHHHHcCCCEEEEec-cch
Confidence 3457889999999999886432 245678999999999999999999999999 999999998754332 334
Q ss_pred ccccc-ccCeeecCcccccc
Q 007903 563 THSYY-RLKFNCSSKSFHIS 581 (585)
Q Consensus 563 a~~YY-rlGF~~~~~~~~~~ 581 (585)
+..|| ++||+..+..|.++
T Consensus 113 A~~fY~k~GF~~~g~~f~~~ 132 (145)
T d2jdca1 113 ASGYYKKLGFSEQGEVFDTP 132 (145)
T ss_dssp GHHHHHHTTCEEEEEEEECT
T ss_pred HHHHHHHCCCEEeCcEeccC
Confidence 55556 79999988776654
|
| >d1ufha_ d.108.1.1 (A:) Putative acetyltransferase YycN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Putative acetyltransferase YycN species: Bacillus subtilis [TaxId: 1423]
Probab=99.18 E-value=1.9e-11 Score=108.60 Aligned_cols=129 Identities=9% Similarity=0.033 Sum_probs=87.6
Q ss_pred cccccccccCHHHHHHHHHHHHHccc--cccCCH--------HHHHhcc-------C--eEEEEEECCeEEEEEEEeeec
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGA--LVRRTD--------EELLKAL-------D--SFYVVEREGQIIACAALFPFF 509 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~--~~~~~~--------e~l~~~i-------~--~~~Va~~dg~IVG~~~l~~~~ 509 (585)
..||+++++|++.+.++......... ...|.. +.+...+ . .+++...+++++|++.+....
T Consensus 2 i~lRp~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~~~~~ 81 (155)
T d1ufha_ 2 IMLTPMQTEEFRSYLTYTTKHYAEEKVKAGTWLPEDAQLLSKQVFTDLLPRGLETPHHHLWSLKLNEKDIVGWLWIHAEP 81 (155)
T ss_dssp CEEEECCHHHHHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHCTTGGGSTTEEEEEEESSSSCEEEEEEEEECT
T ss_pred EEEEeCCHHHHHHHHHHHHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEEEEEEcCCeEEEEEEEEeec
Confidence 46899999999999998643211110 011111 1222211 1 234456789999999887432
Q ss_pred --cCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccce---ecccccccccCeeecCcccccc
Q 007903 510 --KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFL---RGRTHSYYRLKFNCSSKSFHIS 581 (585)
Q Consensus 510 --~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~---~~~a~~YYrlGF~~~~~~~~~~ 581 (585)
.++.++|..++|+|+|||+|+|+.||+.++ +++++.|+........ ......|.++||+..+..|..+
T Consensus 82 ~~~~~~~~i~~~~v~~~~rg~Gig~~ll~~~~----~~~~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~g~~m~k~ 154 (155)
T d1ufha_ 82 EHPQQEAFIYDFGLYEPYRGKGYAKQALAALD----QAARSMGIRKLSLHVFAHNQTARKLYEQTGFQETDVVMSKK 154 (155)
T ss_dssp TCTTCEEEEEEEEECGGGCSSSHHHHHHHHHH----HHHHHTTCCEEEECCCTTCHHHHHHHHHTTCCCCCCCCCCC
T ss_pred cCCCCceEEEEEEEEHHHcCCcccchHHHHHH----HHhhhcCCceeEEEEcCCCHHHHHHHHHCCCEEEeEEEEEE
Confidence 246789999999999999999999999999 8899999887433222 2234456689999888766544
|
| >d2fl4a1 d.108.1.1 (A:1-146) Probable spermine/spermidine acetyltransferase EF1086 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable spermine/spermidine acetyltransferase EF1086 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.18 E-value=7.3e-12 Score=112.18 Aligned_cols=121 Identities=11% Similarity=0.038 Sum_probs=83.1
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHHhcc----CeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccC
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPE 524 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i----~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~Pe 524 (585)
.+||+++++|++++.+|........+..+ ..+.+.... ..++++..++++||++.+.. ..+..++|..++|+|+
T Consensus 3 i~ir~~t~~d~~~i~~l~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~i~~~~~~vG~~~~~~-~~~~~~~i~~~~v~~~ 80 (146)
T d2fl4a1 3 IHFEKVTSDNRKAVENLQVFAEQQAFIES-MAENLKESDQFPEWESAGIYDGNQLIGYAMYGR-WQDGRVWLDRFLIDQR 80 (146)
T ss_dssp CCCCCCCTTTHHHHHTCCCTTCHHHHHHH-HHHHHHHHHHCTTEEEEEEEETTEEEEEEEEEE-CTTSCEEEEEEEECGG
T ss_pred EEEEECCHHHHHHHHHHHccccchhhhhh-HHHHHHHHhhCCCeEEEEEEECCEEEEEEEEEE-cCCCeEEEeeEEEcHH
Confidence 57999999999999988322221111100 111122111 35678889999999999984 4567889999999999
Q ss_pred CcCCcHHHHHHHHHHhhhHHHH-HHcCCcccCccce--ec-ccccccccCeeecC
Q 007903 525 CRGQGQGDKLLGLCIWPLLSET-RYDHISTNGFPFL--RG-RTHSYYRLKFNCSS 575 (585)
Q Consensus 525 yRGkGIGk~LL~~~~~~a~~~A-~~~gi~~~g~~~~--~~-~a~~YYrlGF~~~~ 575 (585)
|||+|||++|++.++ +++ +..++....+... +. ..+.|+++||+..+
T Consensus 81 ~rgkGiG~~ll~~~~----~~~~~~~~~~~i~l~v~~~N~~a~~~Y~k~GF~~~g 131 (146)
T d2fl4a1 81 FQGQGYGKAACRLLM----LKLIEKYQTNKLYLSVYDTNSSAIRLYQQLGFVFNG 131 (146)
T ss_dssp GTTSSHHHHHHHHHH----HHHHHHSSCSEEEEEECTTCHHHHHHHHHTTCEEEE
T ss_pred HcCCChhhhhhhhhc----cccccccCceEEEeecccccHHHHHHHHHCCCEEee
Confidence 999999999999998 554 4557776433222 22 33445589999875
|
| >d1bo4a_ d.108.1.1 (A:) Aminoglycoside 3-N-acetyltransferase {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Aminoglycoside 3-N-acetyltransferase species: Serratia marcescens [TaxId: 615]
Probab=99.17 E-value=1.1e-10 Score=102.31 Aligned_cols=118 Identities=13% Similarity=0.017 Sum_probs=80.3
Q ss_pred cccccccccCHHHHHHHHHHHHHcc------ccccCCHHHHHhcc----CeEEEEEECCeEEEEEEEeeec----cCCce
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESG------ALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFF----KEKCG 514 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~------~~~~~~~e~l~~~i----~~~~Va~~dg~IVG~~~l~~~~----~~~~a 514 (585)
+.++++.|+|++.+.+|+..+.+.. ...+.+.+.+...+ ..+++++.++++||++.+.+.. ....+
T Consensus 3 i~~~r~~P~d~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~~~ 82 (137)
T d1bo4a_ 3 IRTCRLGPDQVKSMRAALDLFGREFGDVATYSQHQPDSDYLGNLLRSKTFIALAAFDQEAVVGALAAYVLPKFEQPRSEI 82 (137)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHHHTTCHHHHHSSCCCHHHHHHHHHSSSEEEEEEEETTEEEEEEEEEEEECSSSSCEEE
T ss_pred EEEEeCCHhhHHHHHHHHHHHHHHhcchhhhccCCCcHHHHHHhhcCCCeEEEEEEECCeeeeecccccccCccCCCCEE
Confidence 3567788899998887754332211 01122334333333 3567888999999998876432 24567
Q ss_pred EEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccce--eccccccc-ccC
Q 007903 515 EVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFL--RGRTHSYY-RLK 570 (585)
Q Consensus 515 eI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~--~~~a~~YY-rlG 570 (585)
+|..|+|+|+|||+|+|++||++++ +++++.|+....+... +..+..|| ++|
T Consensus 83 ~i~~l~V~p~~Rg~Gig~~Ll~~~~----~~a~~~g~~~i~l~v~~~N~~a~~~y~~~G 137 (137)
T d1bo4a_ 83 YIYDLAVSGEHRRQGIATALINLLK----HEANALGAYVIYVQADYGDDPAVALYTKLG 137 (137)
T ss_dssp EEEEEEECTTSTTSSHHHHHHHHHH----HHHHHHTCCEEEEECCCSCCSSEEEEEEC-
T ss_pred EEEEEEEcHHHhhhchhhHHHHHHH----HHHHHcCCCEEEEEEeCCCHHHHHHHHhcC
Confidence 8999999999999999999999999 9999999987543322 22344454 566
|
| >d1xeba_ d.108.1.1 (A:) Hypothetical protein PA0115 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein PA0115 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.16 E-value=2.9e-11 Score=109.86 Aligned_cols=125 Identities=17% Similarity=0.207 Sum_probs=83.0
Q ss_pred ccccccccCHHHHHHHHHHHHHccccccCC-HHHHHhc-cCeEEEEEECCeEEEEEEEeeec-cCCceEEeeEEEccCCc
Q 007903 450 GTRTAKVTDLSGIKQIIQPLVESGALVRRT-DEELLKA-LDSFYVVEREGQIIACAALFPFF-KEKCGEVAAIGVSPECR 526 (585)
Q Consensus 450 ~IR~at~~D~~~I~~Li~~~~~~~~~~~~~-~e~l~~~-i~~~~Va~~dg~IVG~~~l~~~~-~~~~aeI~~L~V~PeyR 526 (585)
.+...+.+|+.++.+|.....-.....+.. .+..... -...+++..||++|||+.+.+.. ..+...|..++|+|+||
T Consensus 8 ~f~el~~~el~~i~~lR~~VFv~EQ~~~~~e~D~~D~~~~s~hl~~~~~~~~vg~~rl~~~~~~~~~~~i~rvaV~~~~R 87 (149)
T d1xeba_ 8 HHADLTLKELYALLQLRTEVFVVEQKCPYQEVDGLDLVGDTHHLMAWRDGQLLAYLRLLDPVRHEGQVVIGRVVSSSAAR 87 (149)
T ss_dssp EGGGCCHHHHHHHHHHHHHHHTTTTTCCCCSCCSCTTSTTCEEEEEEETTEEEEEEEEECSTTTTTCEEEEEEEECGGGT
T ss_pred ehHHCCHHHHHHHHHHHHHheEecCCCCCCCCcCCcccCceEEEEEEeCCeEEEEEEEeeccccCCcEEEEEEEEehhhh
Confidence 355667777778877755443221111111 1111111 14567889999999999887532 34578999999999999
Q ss_pred CCcHHHHHHHHHHhhhHHHHHHcCCcc-cCccceeccccccc-ccCeeecCcccc
Q 007903 527 GQGQGDKLLGLCIWPLLSETRYDHIST-NGFPFLRGRTHSYY-RLKFNCSSKSFH 579 (585)
Q Consensus 527 GkGIGk~LL~~~~~~a~~~A~~~gi~~-~g~~~~~~~a~~YY-rlGF~~~~~~~~ 579 (585)
|+|+|++||++++ +.+++++... ..+. -+..+..|| ++||++.+..|.
T Consensus 88 g~GiG~~L~~~~l----~~~~~~~~~~~i~l~-A~~~a~~FY~k~GF~~~g~~f~ 137 (149)
T d1xeba_ 88 GQGLGHQLMERAL----QAAERLWLDTPVYLS-AQAHLQAYYGRYGFVAVTEVYL 137 (149)
T ss_dssp TSSHHHHHHHHHH----HHHHHHHTTCCEEEE-EESTTHHHHHTTTEEECSCCEE
T ss_pred ccChhHHHHHHHH----HHHHHhCCCCEEEEe-ChHHHHHHHHHCCCEECCCccc
Confidence 9999999999999 7777765543 2221 133445566 799999998775
|
| >d1q2ya_ d.108.1.1 (A:) Probable acetyltransferase YjcF {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase YjcF species: Bacillus subtilis [TaxId: 1423]
Probab=99.16 E-value=3.2e-11 Score=108.32 Aligned_cols=115 Identities=14% Similarity=0.103 Sum_probs=80.6
Q ss_pred cccCHHHHHHHHHHHHHcccccc--CCHHHHHhccCeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCCcCCcHHH
Q 007903 455 KVTDLSGIKQIIQPLVESGALVR--RTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGD 532 (585)
Q Consensus 455 t~~D~~~I~~Li~~~~~~~~~~~--~~~e~l~~~i~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGkGIGk 532 (585)
+.+++.++.+|.....-.....| ...+.++ ....++++..++++||++.+.+ .++.++|..++|+|+|||+|+|+
T Consensus 8 ~~~el~~~~~iR~~VF~~Eq~ip~~~e~D~~D-~~~~h~v~~~~~~~vg~~~~~~--~~~~~~i~~l~V~~~~rg~GiG~ 84 (140)
T d1q2ya_ 8 NEEQLKDAFYVREEVFVKEQNVPAEEEIDELE-NESEHIVVYDGEKPVGAGRWRM--KDGYGKLERICVLKSHRSAGVGG 84 (140)
T ss_dssp SHHHHHHHHHHHHHHHTTTSCCCTTTTCCTTG-GGSEEEEEEETTEEEEEEEEEE--ETTEEEEEEEECCGGGTTTTHHH
T ss_pred CHHHHHHHHHHHHHHeeeccCCChhhhcCCCC-cccEEEEEeccccEEEEEeeec--ccceeeEeeeEEchhhcCCcHHH
Confidence 45566677766444332221112 1111111 1256788999999999999874 45689999999999999999999
Q ss_pred HHHHHHHhhhHHHHHHcCCcccCccceeccccccc-ccCeeecCcc
Q 007903 533 KLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYY-RLKFNCSSKS 577 (585)
Q Consensus 533 ~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YY-rlGF~~~~~~ 577 (585)
+||++++ +++++.|+....+.. +..+..|| ++||...+..
T Consensus 85 ~Ll~~~~----~~a~~~g~~~i~l~a-~~~a~~fY~k~GF~~~~~~ 125 (140)
T d1q2ya_ 85 IIMKALE----KAAADGGASGFILNA-QTQAVPFYKKHGYRVLSEK 125 (140)
T ss_dssp HHHHHHH----HHHHHTTCCSEEEEE-EGGGHHHHHHTTCEESCSC
T ss_pred HHHHHHH----HHHHHcCCCceEEeC-CHHHHHHHHHCcCEEcCCe
Confidence 9999999 999999998754433 23344455 7999988754
|
| >d2b5ga1 d.108.1.1 (A:3-169) Diamine acetyltransferase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Diamine acetyltransferase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.15 E-value=1.2e-11 Score=112.44 Aligned_cols=124 Identities=20% Similarity=0.132 Sum_probs=87.3
Q ss_pred cccccccccCHHHHHHHHHHHHHccc---cccCCHHHHHhcc------Ce--------EEEEEECCeEEEEEEEeeecc-
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGA---LVRRTDEELLKAL------DS--------FYVVEREGQIIACAALFPFFK- 510 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~---~~~~~~e~l~~~i------~~--------~~Va~~dg~IVG~~~l~~~~~- 510 (585)
.+||+++++|++.|.+|++.+..... ....+.+.+.... .. .+++..++++||++.+.+..+
T Consensus 2 f~IR~at~~D~~~i~~l~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~ 81 (167)
T d2b5ga1 2 FVIRPATAADCSDILRLIKELAKYEYMEEQVILTEKDLLEDGFGEHPFYHCLVAEVPKEHWTPEGHSIVGFAMYYFTYDP 81 (167)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHTCC----CCCCCHHHHHHHHSSSSCSCEEEEEECCGGGCCTTCCCEEEEEEEEEEEET
T ss_pred EEEEeCCHHHHHHHHHHHHHHHHHhcCcccccCCHHHHHhhccccchhhhhhhhccCceeEEeeCCeEEEEEEEEeeccc
Confidence 47999999999999999876543221 1223555554422 11 223445688999998765332
Q ss_pred --CCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee--ccccccc-ccCeeecCc
Q 007903 511 --EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR--GRTHSYY-RLKFNCSSK 576 (585)
Q Consensus 511 --~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~--~~a~~YY-rlGF~~~~~ 576 (585)
....+|..++|+|+|||+|+|++||++++ ++|++.|+....+.... ..+..|| ++||+..+.
T Consensus 82 ~~~~~~~i~~l~v~~~~rg~Gig~~L~~~l~----~~a~~~g~~~i~l~v~~~N~~A~~fY~k~GF~~~~~ 148 (167)
T d2b5ga1 82 WIGKLLYLEDFFVMSDYRGFGIGSEILKNLS----QVAMRCRCSSMHFLVAEWNEPSINFYKRRGASDLSS 148 (167)
T ss_dssp TTEEEEEEEEEEECGGGCSSSHHHHHHHHHH----HHHHHHTCSEEEEEEETTCHHHHHHHHTTTCEEHHH
T ss_pred ccccceecceeeeeeccccCCCchhhhhhhh----hhhcccCcceeeeecccCcHHHHHHHHHCCCEECcE
Confidence 24568889999999999999999999999 99999999886544332 2344455 799998643
|
| >d1z4ra1 d.108.1.1 (A:497-658) Catalytic domain of GCN5 histone acetyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Catalytic domain of GCN5 histone acetyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.15 E-value=5.5e-11 Score=109.45 Aligned_cols=83 Identities=12% Similarity=0.046 Sum_probs=68.6
Q ss_pred CeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceeccccccc
Q 007903 488 DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYY 567 (585)
Q Consensus 488 ~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YY 567 (585)
..++++..+|++||++.+.++.+.+.++|..++|+|+|||+|+|++||++++ +.+++.|+...-......+..+|.
T Consensus 52 ~~~~v~~~~~~iIG~i~~~~~~~~~~aeI~~laV~~~~qgkGiG~~Lm~~l~----~~~~~~g~~~i~~~~~~~A~~fY~ 127 (162)
T d1z4ra1 52 HKTLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTSNEQVKGYGTHLMNHLK----EYHIKHNILYFLTYADEYAIGYFK 127 (162)
T ss_dssp CEEEEEEETTEEEEEEEEEEETTTTEEEEEEEEECGGGCSSSHHHHHHHHHH----HHHHHTTCCEEEEEECGGGHHHHH
T ss_pred ceEEEEEECCEEEEEEEEEEECCCCEEEEEEEEEChhhhhhhHHHHHHHHHH----HHHHHCCCcEEEEecCcchHHHHH
Confidence 5778888999999999998777777899999999999999999999999999 999999998754333233344455
Q ss_pred ccCeeec
Q 007903 568 RLKFNCS 574 (585)
Q Consensus 568 rlGF~~~ 574 (585)
|.||+..
T Consensus 128 k~GF~~~ 134 (162)
T d1z4ra1 128 KQGFSKD 134 (162)
T ss_dssp HTTEESC
T ss_pred hCCCeEe
Confidence 7999754
|
| >d1wwza1 d.108.1.1 (A:1-157) Hypothetical protein PH1933 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein PH1933 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.15 E-value=2.1e-11 Score=109.15 Aligned_cols=84 Identities=18% Similarity=0.216 Sum_probs=63.7
Q ss_pred CeEEEEEECCeEEEEEEEeeec-----cCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccc-eec
Q 007903 488 DSFYVVEREGQIIACAALFPFF-----KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPF-LRG 561 (585)
Q Consensus 488 ~~~~Va~~dg~IVG~~~l~~~~-----~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~-~~~ 561 (585)
..++|+..|++++|++.+.... ..+.++|..|+|+|+|||+|+|++||++++ ++|++.+........ .+.
T Consensus 55 ~~~~v~~~~~~~vg~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~----~~a~~~~~~~~~~v~~~N~ 130 (157)
T d1wwza1 55 DGFFVAKVGDKIVGFIVCDKDWFSKYEGRIVGAIHEFVVDKKFQGKGIGRKLLITCL----DFLGKYNDTIELWVGEKNY 130 (157)
T ss_dssp GGEEEEEETTEEEEEEEEEEEEEETTTTEEEEEEEEEEECGGGTTSSHHHHHHHHHH----HHHHTTCSEEEEEEETTCH
T ss_pred CeEEEEEECCEEEEEEEeeccccccccCCcEEEEEEEEEEehhccchhHHHHHHHHH----HHHHHhCCceEEEEcCCCH
Confidence 5688999999999999886421 134678999999999999999999999999 888888865432211 112
Q ss_pred cc-ccccccCeeecC
Q 007903 562 RT-HSYYRLKFNCSS 575 (585)
Q Consensus 562 ~a-~~YYrlGF~~~~ 575 (585)
.+ +.|.++||+..+
T Consensus 131 ~a~~~Y~k~GF~~~g 145 (157)
T d1wwza1 131 GAMNLYEKFGFKKVG 145 (157)
T ss_dssp HHHHHHHHTTCEEEE
T ss_pred HHHHHHHHCCCEEEe
Confidence 33 345589999875
|
| >d2ozga2 d.108.1.10 (A:8-290) Putative acetyltransferase Ava4977 {Anabaena variabilis [TaxId: 1172]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: EF1021-like domain: Putative acetyltransferase Ava4977 species: Anabaena variabilis [TaxId: 1172]
Probab=99.13 E-value=6.1e-11 Score=118.17 Aligned_cols=117 Identities=21% Similarity=0.355 Sum_probs=87.5
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCH-HHHHhcc--CeEEEEEECCeEEEEEEEeeecc------CCceEEeeE
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTD-EELLKAL--DSFYVVEREGQIIACAALFPFFK------EKCGEVAAI 519 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~-e~l~~~i--~~~~Va~~dg~IVG~~~l~~~~~------~~~aeI~~L 519 (585)
..||+++++|++++.+|+.. .|..++.. +.+.+.+ +.++++.+|+++||++.+.+... -+.+.|..+
T Consensus 2 ~~~~ka~~~d~~~l~~l~~~----~F~~~~~~~~~~~~~~~~~~~~v~~~~~~ivg~~~~~~~~~~~~g~~~~~~~i~~v 77 (283)
T d2ozga2 2 FKYTKASQENIQQLGNILEQ----CFVMSFGDSEIYVKGIGLENFRVIYREQKVAGGLAILPMGQWWGGQRVPMAGIAAV 77 (283)
T ss_dssp EEEEECCTTTHHHHHHHHHH----HTTCCTTHHHHHHHHHCGGGEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred eEEEECCHHHHHHHHHHHHH----HcCCCcCcHHHHHHHhcCCCEEEEEECCEEEEEEEEEEeeeeECCeeeeEeeEEEE
Confidence 36899999999999999543 34333333 3344433 56889999999999999986421 145789999
Q ss_pred EEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceeccccccc-ccCeeecCc
Q 007903 520 GVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYY-RLKFNCSSK 576 (585)
Q Consensus 520 ~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YY-rlGF~~~~~ 576 (585)
+|+|+|||+|+|++||++++ +.+++.|+.-. .+......|| ++||+..+.
T Consensus 78 ~v~p~~rg~G~~~~L~~~~~----~~~~~~g~~~~---~l~~~~~~~Y~~~Gf~~~~~ 128 (283)
T d2ozga2 78 GIAPEYRGDGAAIALIQHTL----QEISEQDIPIS---VLYPATQRLYRKAGYEQAGS 128 (283)
T ss_dssp EECGGGTTSSHHHHHHHHHH----HHHHHTTCCEE---EECCSCHHHHHHTTCEEEEE
T ss_pred EECcccccCChHHHHHHHHH----HHHHhcCceEE---EccCCccchHHcCCCeEece
Confidence 99999999999999999999 88888887532 2334444455 799998754
|
| >d2g3aa1 d.108.1.1 (A:1-137) Probable acetyltransferase Atu2258 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase Atu2258 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.13 E-value=1.8e-11 Score=109.30 Aligned_cols=114 Identities=18% Similarity=0.123 Sum_probs=79.0
Q ss_pred ccccccccCHHHHHHHHHHHHHccccccCCHHHHHhcc---CeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCCc
Q 007903 450 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECR 526 (585)
Q Consensus 450 ~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i---~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyR 526 (585)
+++.+...|.+....+...+... ..+.+.... ..+++++.||++||++.... .....+|..++|+|+||
T Consensus 2 ~~~l~d~~d~e~~~~i~~~l~~~------~~~~~~~~~~~~~~~~v~d~~g~ivG~~~~~~--~~~~~~i~~l~V~p~~r 73 (137)
T d2g3aa1 2 NFVLSDVADAEAEKAIRDPLVAY------NLARFGESDKRDLNITIRNDDNSVTGGLVGHT--ARGWLYVQLLFVPEAMR 73 (137)
T ss_dssp CCCCCCSCCHHHHHHHHHHHHHH------HHHHHCCCCCEEEEEEEECTTCCEEEEEEEEE--ETTEEEEEEEECCGGGC
T ss_pred eEEEcCCCCHHHHHHHHHHHHHh------hHhhcCcccccceEEEEEeCCCCEEEEEEEEE--eCCeEEEEEEEEChhhc
Confidence 45566666777666664333211 111111111 24567777899999988774 34588999999999999
Q ss_pred CCcHHHHHHHHHHhhhHHHHHHcCCcccCccceeccccccc-ccCeeecC
Q 007903 527 GQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYY-RLKFNCSS 575 (585)
Q Consensus 527 GkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YY-rlGF~~~~ 575 (585)
|+|+|++||++++ ++|++.|+....+...+..+..|| |+||+..+
T Consensus 74 g~GiG~~Ll~~~~----~~a~~~g~~~i~l~~~n~~a~~fY~k~GF~~~g 119 (137)
T d2g3aa1 74 GQGIAPKLLAMAE----EEARKRGCMGAYIDTMNPDALRTYERYGFTKIG 119 (137)
T ss_dssp SSSHHHHHHHHHH----HHHHHTTCCEEEEEESCHHHHHHHHHHTCEEEE
T ss_pred CCChHHHHHHHHH----HHHHHcCCceEEEecccHhhHHHHHhCCCEEEE
Confidence 9999999999999 999999998764433333445555 79999774
|
| >d2ge3a1 d.108.1.1 (A:6-169) Probable acetyltransferase Atu2290 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase Atu2290 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.13 E-value=1.1e-10 Score=105.43 Aligned_cols=122 Identities=13% Similarity=0.267 Sum_probs=86.3
Q ss_pred cccccccccCHHHHHHHHHHHHHccc----cccCCHHHHHhcc-------CeEEEEEECCeEEEEEEEeeeccCC---ce
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGA----LVRRTDEELLKAL-------DSFYVVEREGQIIACAALFPFFKEK---CG 514 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~----~~~~~~e~l~~~i-------~~~~Va~~dg~IVG~~~l~~~~~~~---~a 514 (585)
.+||+++++|++.+.++++....... ..+.+.+.....+ ..+++++.++++||++.+....... .+
T Consensus 3 i~iR~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~ 82 (164)
T d2ge3a1 3 VTIKPIRAEHVESFHRALDAVSRERKYLSFLEAPPLEAVRAFVLDMIENDHPQFVAIADGDVIGWCDIRRQDRATRAHCG 82 (164)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHTTCSSCSSSSCCCHHHHHHHHHHHHHTTCCEEEEEETTEEEEEEEEEECCSTTTTTEE
T ss_pred EEEEECCHHHHHHHHHHHHHHHHhhhhhccCCCCCHHHHHHHHHHhhcCCceEEEEEECCEEEEEEEeeccccCCcCcEE
Confidence 57999999999999999876654322 1222333333222 5678899999999999987543322 23
Q ss_pred EEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee--cccc-cccccCeeecC
Q 007903 515 EVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR--GRTH-SYYRLKFNCSS 575 (585)
Q Consensus 515 eI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~--~~a~-~YYrlGF~~~~ 575 (585)
++ .++|+|+|||+|+|++|++.++ ++|++.++......... ..+. .|.++||+..+
T Consensus 83 ~~-~~~v~~~~rg~Gig~~l~~~~~----~~a~~~~~~~i~~~v~~~N~~s~~~y~k~GF~~~g 141 (164)
T d2ge3a1 83 TL-GMGILPAYRNKGLGARLMRRTL----DAAHEFGLHRIELSVHADNARAIALYEKIGFAHEG 141 (164)
T ss_dssp EE-EEEECGGGTTSSHHHHHHHHHH----HHHHHHTCCEEEEEEETTCHHHHHHHHHHTCEEEE
T ss_pred EE-EEEeChhhccccccccchhhhh----heeccccccccccccCcchHHHHHHHHHCCCEEEE
Confidence 44 5899999999999999999999 88888898875433221 2233 45579999764
|
| >d1y9ka1 d.108.1.1 (A:1-152) IAA acetyltransferase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: IAA acetyltransferase species: Bacillus cereus [TaxId: 1396]
Probab=99.11 E-value=4.8e-11 Score=108.58 Aligned_cols=113 Identities=17% Similarity=0.205 Sum_probs=81.4
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHHhcc--CeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCCc
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECR 526 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i--~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyR 526 (585)
..|+++.++++|...-+ ..+ .+.+.+...+ ..+||++++|++||++.+.. ..++.++|..++|+|+||
T Consensus 3 ~~ie~i~~~~~P~~ll~----~aD-----p~~~~i~~yl~~~~~~v~~~~g~ivG~~~~~~-~~~~~~~i~~l~V~p~~r 72 (152)
T d1y9ka1 3 VVIERIPKEAIPKSLLL----LAD-----PSERQIATYVQRGLTYVAKQGGSVIGVYVLLE-TRPKTMEIMNIAVAEHLQ 72 (152)
T ss_dssp CEEEEECGGGCCHHHHH----HHC-----CCHHHHHHHHHHSEEEEEECSSSEEEEEEEEE-CSTTEEEEEEEEECGGGC
T ss_pred eEEEecChhhCChhHHh----ccC-----CCHHHHHHHhcCCeEEEEEECCEEEEEEEEEE-cCCCEEEEEEEEEcHHHC
Confidence 34667777777653322 111 1234444433 67899999999999998873 567789999999999999
Q ss_pred CCcHHHHHHHHHHhhhHHHHHHcCCcccCccce--eccccccc-ccCeeecC
Q 007903 527 GQGQGDKLLGLCIWPLLSETRYDHISTNGFPFL--RGRTHSYY-RLKFNCSS 575 (585)
Q Consensus 527 GkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~--~~~a~~YY-rlGF~~~~ 575 (585)
|+|+|++||++++ ++|++.|+....+... +..+..|| ++||+..+
T Consensus 73 g~GiG~~Ll~~~~----~~a~~~g~~~i~l~t~~~n~~a~~fY~k~GF~~~~ 120 (152)
T d1y9ka1 73 GKGIGKKLLRHAV----ETAKGYGMSKLEVGTGNSSVSQLALYQKCGFRIFS 120 (152)
T ss_dssp SSSHHHHHHHHHH----HHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEEEE
T ss_pred CCCcchHHHHHHH----HHHHHcCCceEEEEeccCCHHHHHHHHHCCCEEEe
Confidence 9999999999999 9999999987543322 22344455 79999865
|
| >d2gana1 d.108.1.1 (A:1-182) Hypothetical protein PH0736 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein PH0736 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.10 E-value=2.4e-10 Score=106.30 Aligned_cols=110 Identities=25% Similarity=0.423 Sum_probs=80.4
Q ss_pred ccccccCHHHHHHHHHHHHHccccccCCHHHHHhccCeEEEEEECCeEEEEEEEeeec--------------cCCceEEe
Q 007903 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFF--------------KEKCGEVA 517 (585)
Q Consensus 452 R~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i~~~~Va~~dg~IVG~~~l~~~~--------------~~~~aeI~ 517 (585)
+...+.|.+.+..++.+.. ...+......++|++.||++||++.+.+.. ..+.++|.
T Consensus 40 ~~~~~~d~~~~~~~~~~~~---------~~~~~~~~~~~~va~~d~~ivG~~~l~~~~~~~~~~~~~~~~~~~~~~~~I~ 110 (182)
T d2gana1 40 RKPNPNDFNGFREVYEPFL---------KFRLSQEFDELYTYQKDNRIIGTIALVYKRIKEKGIWWVPEELMNEKVGLIE 110 (182)
T ss_dssp SCCCTTCHHHHHHHHHHHH---------HHHHHTTCSEEEEEEESSCEEEEEEEECSCGGGTCCTTCCGGGCSTTEEEEE
T ss_pred ccCCHHHHHHHHHHHHHHH---------HHHhcCCcceEEEEEECCEEEEEEEEeccCcccccccccccccCCCCEEEEE
Confidence 4567788888777744332 233444557799999999999999886421 23568999
Q ss_pred eEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccC--ccceecccccccccCeeec
Q 007903 518 AIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNG--FPFLRGRTHSYYRLKFNCS 574 (585)
Q Consensus 518 ~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g--~~~~~~~a~~YYrlGF~~~ 574 (585)
.|+|+|+|||+|||++||++++ +.|++.|+...- ++........|.|+||+..
T Consensus 111 ~l~V~p~~rg~GiG~~Ll~~~~----~~ak~~G~~~~l~~~~~n~~a~~fY~k~GF~~~ 165 (182)
T d2gana1 111 FFVVDPEFQGKGIGSTLLEFAV----KRLRSLGKDPYVVTFPNLEAYSYYYMKKGFREI 165 (182)
T ss_dssp EEEECTTSTTSSHHHHHHHHHH----HHHHHTTCEEEEEECGGGSHHHHHHHTTTEEEE
T ss_pred EEEECHhhcCCCHHHHHHHHHH----HHHHHcCCeEEEEEccCCHHHHHHHHHCCCEEe
Confidence 9999999999999999999999 999999986431 1221223334558999865
|
| >d2beia1 d.108.1.1 (A:3-169) Diamine acetyltransferase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Diamine acetyltransferase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.08 E-value=1e-10 Score=105.41 Aligned_cols=124 Identities=22% Similarity=0.188 Sum_probs=84.0
Q ss_pred cccccccccCHHHHHHHHHHHHH---ccccccCCHHHHHhcc------C--------eEEEEEECCeEEEEEEEeeec--
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVE---SGALVRRTDEELLKAL------D--------SFYVVEREGQIIACAALFPFF-- 509 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~---~~~~~~~~~e~l~~~i------~--------~~~Va~~dg~IVG~~~l~~~~-- 509 (585)
+.||+++++|+++|.+|++.+.. ......++.+.+...+ . ...+...++.++|++.+....
T Consensus 2 i~IR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 81 (167)
T d2beia1 2 VRIREAKEGDCGDILRLIRELAEFEKLSDQVKISEEALRADGFGDNPFYHCLVAEILPAPGKLLGPCVVGYGIYYFIYST 81 (167)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHHTC----CCCHHHHHHHHHSSSCSCEEEEEEEC-------CCEEEEEEEEEEEEET
T ss_pred EEEEeCCHHHHHHHHHHHHHHHHHhcCcccccCCHHHHHHhhccccchhhhhhhhcccccceeecceeeeEEEeeccccc
Confidence 47999999999999999875432 1223345666655432 1 122334567888988765432
Q ss_pred -cCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcccee--ccccccc-ccCeeecCc
Q 007903 510 -KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR--GRTHSYY-RLKFNCSSK 576 (585)
Q Consensus 510 -~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~--~~a~~YY-rlGF~~~~~ 576 (585)
..+..++..++|+|+|||+|+|++||++++ +++++.|+....+.... ..+..|| ++||+..+.
T Consensus 82 ~~~~~~~i~~~~v~~~~rg~GiG~~L~~~~~----~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~GF~~~~~ 148 (167)
T d2beia1 82 WKGRTIYLEDIYVMPEYRGQGIGSKIIKKVA----EVALDKGCSQFRLAVLDWNQRAMDLYKALGAQDLTE 148 (167)
T ss_dssp TTEEEEEEEEEEECGGGCSSSHHHHHHHHHH----HHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEHHH
T ss_pred ccccceeccceecCHhhcCCCcchhhHHHHH----HHHhhhcccccceeeccCCHHHHHHHHHCCCEEccE
Confidence 235678999999999999999999999999 99999999876543322 2344455 799997753
|
| >d1yvka1 d.108.1.1 (A:5-156) Hypothetical protein YvbK (BSu33890) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein YvbK (BSu33890) species: Bacillus subtilis [TaxId: 1423]
Probab=99.07 E-value=2.8e-10 Score=103.38 Aligned_cols=91 Identities=15% Similarity=0.140 Sum_probs=72.2
Q ss_pred HHHHHhcc--CeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCcc
Q 007903 480 DEELLKAL--DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFP 557 (585)
Q Consensus 480 ~e~l~~~i--~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~ 557 (585)
.+.+...+ ..+||+..+|++||++.+.+ .++..+++..++|+|+|||+|+|++|+++++ +++++.|+....+.
T Consensus 25 ~~~i~~~~~~~~~~v~~~~g~ivG~~~~~~-~~~~~~~l~~i~V~p~~rg~Gig~~Ll~~~~----~~a~~~g~~~~~l~ 99 (152)
T d1yvka1 25 KDIVDEYLERGECYTAWAGDELAGVYVLLK-TRPQTVEIVNIAVKESLQKKGFGKQLVLDAI----EKAKKLGADTIEIG 99 (152)
T ss_dssp HHHHHHHHHHSEEEEEEETTEEEEEEEEEE-CSTTEEEEEEEEECGGGTTSSHHHHHHHHHH----HHHHHTTCSEEEEE
T ss_pred HHHHHHHHhCCeEEEEEECCEEEEEEEEEe-cCCCEEEEEEeeeCHhHcCCCcccHHHHHHH----HHhhhhccccccee
Confidence 44454443 67899999999999999985 4567899999999999999999999999999 99999999875432
Q ss_pred ce--eccccccc-ccCeeecC
Q 007903 558 FL--RGRTHSYY-RLKFNCSS 575 (585)
Q Consensus 558 ~~--~~~a~~YY-rlGF~~~~ 575 (585)
.. +..++.|| ++||+..+
T Consensus 100 ~~~~n~~a~~fYek~GF~~~~ 120 (152)
T d1yvka1 100 TGNSSIHQLSLYQKCGFRIQA 120 (152)
T ss_dssp EETTCHHHHHHHHHTTCEEEE
T ss_pred eccCCHHHHHHHHHCCCEEEE
Confidence 22 22344455 79999775
|
| >d2hv2a2 d.108.1.10 (A:2-286) Hypothetical protein EF1021 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: EF1021-like domain: Hypothetical protein EF1021 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.03 E-value=5e-10 Score=111.37 Aligned_cols=117 Identities=13% Similarity=0.157 Sum_probs=86.0
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHH---HHHhcc--CeEEEEEECCeEEEEEEEeeec---c---CCceEEe
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDE---ELLKAL--DSFYVVEREGQIIACAALFPFF---K---EKCGEVA 517 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e---~l~~~i--~~~~Va~~dg~IVG~~~l~~~~---~---~~~aeI~ 517 (585)
.+||+++++|++++.+|+... +...+.++ .+.... ..+++++++|++||++.+.++. . -+.+.|.
T Consensus 3 ~~iR~l~~~d~~~i~~l~~~~----F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvg~~~~~~~~~~~~g~~~~~~~i~ 78 (285)
T d2hv2a2 3 KRVKKMGKEEMKEMFDLVIYA----FNQEPTAERQERFEKLLSHTQSYGFLIDEQLTSQVMATPFQVNFHGVRYPMAGIG 78 (285)
T ss_dssp EEEEECCGGGHHHHHHHHHHH----TTCCCCHHHHHHHHHHHHTSEEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEEE
T ss_pred cEEEECCHHHHHHHHHHHHHH----cCCCCChhHHHHHHHhhccCcEEEEEECCEEEEEEEEEEeEEEECCeeeeEEEEE
Confidence 479999999999999995543 32222222 222222 6788899999999999987542 1 1357899
Q ss_pred eEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceeccccc-ccccCeeecCc
Q 007903 518 AIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHS-YYRLKFNCSSK 576 (585)
Q Consensus 518 ~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~-YYrlGF~~~~~ 576 (585)
.++|+|+|||+|+|++||++++ +.+++.|+.... +...... |.++||+..+.
T Consensus 79 ~v~v~p~~rg~G~~~~l~~~~~----~~~~~~g~~~~~---l~~~~~~~Y~~~Gf~~~~~ 131 (285)
T d2hv2a2 79 YVASYPEYRGEGGISAIMKEML----ADLAKQKVALSY---LAPFSYPFYRQYGYEQTFE 131 (285)
T ss_dssp EEEECTTCCSSCHHHHHHHHHH----HHHHHTTCCEEE---ECCSCHHHHHTTTCEECCE
T ss_pred EEEECHHHcCCChHHHHHHHHH----HHHHHhCCceee---eeccchhhHhcCCcEEeee
Confidence 9999999999999999999999 889888876542 3333344 44799997654
|
| >d2i00a2 d.108.1.10 (A:10-300) Putative acetyltransferase EF2353 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: EF1021-like domain: Putative acetyltransferase EF2353 species: Enterococcus faecalis [TaxId: 1351]
Probab=98.99 E-value=6.3e-10 Score=110.81 Aligned_cols=122 Identities=17% Similarity=0.231 Sum_probs=85.9
Q ss_pred cccccccccCHHHHHHHHHHHHHccc----ccc-CCHHHHHhcc------CeEEEEEECCeEEEEEEEeeec---c---C
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGA----LVR-RTDEELLKAL------DSFYVVEREGQIIACAALFPFF---K---E 511 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~----~~~-~~~e~l~~~i------~~~~Va~~dg~IVG~~~l~~~~---~---~ 511 (585)
++||+++++|++++.+|.+....... ... .....+.... ..++++++||++||++.+.++. . -
T Consensus 1 m~iR~~~~~d~~~i~~L~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvg~~~~~~~~~~~~g~~~ 80 (291)
T d2i00a2 1 LTLKPVEEEHIDQFNELLSYVFQVTEADIEESGFENKRAFIKSKQPILELSKVFGWFHENQLISQIAIYPCEVNIHGALY 80 (291)
T ss_dssp CEEEECCGGGHHHHHHHHHHHCCCCHHHHHHTTCSSHHHHHHTTHHHHHHSEEEEEEETTEEEEEEEEEEEEEEETTEEE
T ss_pred CEEEECCHHHHHHHHHHHHHHcCcccccchhcchhhhHHHHHhhccccccCcEEEEEECCEEEEEEEEEEeEEEECCeee
Confidence 47999999999999999654321110 000 1122222221 5788999999999999987542 1 1
Q ss_pred CceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceeccccc-ccccCeeecCcc
Q 007903 512 KCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHS-YYRLKFNCSSKS 577 (585)
Q Consensus 512 ~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~-YYrlGF~~~~~~ 577 (585)
+.+.|..++|+|+|||+|+|++||++++ +.+++.|+.... +...... |.++||...+..
T Consensus 81 ~~~~i~~v~v~p~~r~~G~~~~L~~~~~----~~~~~~~~~~~~---l~~~~~~~Y~~~Gf~~~~~~ 140 (291)
T d2i00a2 81 KMGGVTGVGTYPEYANHGLMKDLIQTAL----EEMRQDKQWISY---LFPYNIPYYRRKGWEIMSDK 140 (291)
T ss_dssp EEEEEEEEEECGGGTTSCHHHHHHHHHH----HHHHHTTCCEEE---ECCSCHHHHHHTTCEEEEEE
T ss_pred eEEEEEEEEEchhhcCCChHHHHHHHHH----HHHHhcCCcEEE---eeccchhhHhcCCCEEeccE
Confidence 3578999999999999999999999999 888888876432 3333344 557999886543
|
| >d1m4ia_ d.108.1.1 (A:) Aminoglycoside 2'-N-acetyltransferase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Aminoglycoside 2'-N-acetyltransferase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.85 E-value=4.9e-09 Score=97.53 Aligned_cols=117 Identities=22% Similarity=0.221 Sum_probs=76.9
Q ss_pred ccccccccCH-----HHHHHHHHHHHHccccccCCHHHHHhcc-CeEEEEEECCeEEEEEEEeeec------cCCceEEe
Q 007903 450 GTRTAKVTDL-----SGIKQIIQPLVESGALVRRTDEELLKAL-DSFYVVEREGQIIACAALFPFF------KEKCGEVA 517 (585)
Q Consensus 450 ~IR~at~~D~-----~~I~~Li~~~~~~~~~~~~~~e~l~~~i-~~~~Va~~dg~IVG~~~l~~~~------~~~~aeI~ 517 (585)
++|.+...|+ +++..+ ....+...++.+.+.... ...+++..+++++|++.+.+.. ..+.++|.
T Consensus 7 T~R~~~~~dld~~~~~~i~~l----~~~aF~~d~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~~I~ 82 (181)
T d1m4ia_ 7 TARLVHTADLDSETRQDIRQM----VTGAFAGDFTETDWEHTLGGMHALIWHHGAIIAHAAVIQRRLIYRGNALRCGYVE 82 (181)
T ss_dssp CCEEEEGGGCCHHHHHHHHHH----HHHHTTTCCCHHHHHHTCSSEEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEEE
T ss_pred eeeecchhhCCHHHHHHHHHH----HHHhccCCCCHHHHhhhcCceEEEEEeCCceeEEEEEEEEEEecCCcccceEEEE
Confidence 4555554443 455555 344444445666666665 4556777899999998876321 12467899
Q ss_pred eEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccceeccccccc-ccCeeecCc
Q 007903 518 AIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRGRTHSYY-RLKFNCSSK 576 (585)
Q Consensus 518 ~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~~~~a~~YY-rlGF~~~~~ 576 (585)
.++|+|+|||+|+|++||++++ +.+++.+.... +. -+.....|| ++||+..+.
T Consensus 83 ~v~V~p~~Rg~Gig~~Ll~~~~----~~~r~~~~~~~-l~-~~~~~~~fY~~~G~~~~~~ 136 (181)
T d1m4ia_ 83 GVAVRADWRGQRLVSALLDAVE----QVMRGAYQLGA-LS-SSARARRLYASRGWLPWHG 136 (181)
T ss_dssp EEEECGGGTTSSHHHHHHHHHH----HHHHHHCSEEE-EE-CCTTTHHHHHHTTCEECCS
T ss_pred EEEEcHHHCCCHHHHHHHHHHH----HHHHhcCCEEE-Ee-cchhhHHHHHHcCCEEcCC
Confidence 9999999999999999999999 77776553211 11 123333455 799997643
|
| >d1r57a_ d.108.1.1 (A:) Hypothetical protein SA2309 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein SA2309 species: Staphylococcus aureus [TaxId: 1280]
Probab=98.70 E-value=1.2e-08 Score=86.25 Aligned_cols=62 Identities=26% Similarity=0.364 Sum_probs=56.3
Q ss_pred CeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCccc
Q 007903 488 DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTN 554 (585)
Q Consensus 488 ~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~ 554 (585)
..||+++++|+++|++.+.+ .+++..+|..++|.|+|||+|+|++|+++++ ++|++.|++..
T Consensus 11 ~~f~v~~~~g~~vg~~~~~~-~~~~~~~i~~~~V~p~~RG~Gig~~Lv~~~l----~~Ar~~g~kvv 72 (102)
T d1r57a_ 11 NKFYIGDDENNALAEITYRF-VDNNEINIDHTGVSDELGGQGVGKKLLKAVV----EHARENNLKII 72 (102)
T ss_dssp TEEEEESSSTTEEEEEEEEE-SSSSEEEEEEEEECCSSSTTCTHHHHHHHHH----HHHHHHTCEEE
T ss_pred CEEEEEEeCCceEEEEEEEE-cCCCEEEEEEEEEChHHCCccHHHHHHHHHH----HHHHHCCCEEE
Confidence 67999999999999999874 4567899999999999999999999999999 99999998753
|
| >d1p0ha_ d.108.1.1 (A:) Mycothiol synthase MshD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Mycothiol synthase MshD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.52 E-value=6.8e-08 Score=95.29 Aligned_cols=124 Identities=18% Similarity=0.095 Sum_probs=76.5
Q ss_pred cccccccccCHHHHHHHHHHHHHccc-cccCCHHHHHhcc-------------CeEEEEEECCeEEEEEEEeeecc-CCc
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGA-LVRRTDEELLKAL-------------DSFYVVEREGQIIACAALFPFFK-EKC 513 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~-~~~~~~e~l~~~i-------------~~~~Va~~dg~IVG~~~l~~~~~-~~~ 513 (585)
...+.....|...+.++......... ..++....+.... ...++++.+|+++|++.+....+ .+.
T Consensus 151 ~~~~~~~~~d~~~~~~l~~~~f~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vvG~~~~~~~~~~~~~ 230 (308)
T d1p0ha_ 151 VIRTYAGTSDDAELLRVNNAAFAGHPEQGGWTAVQLAERRGEAWFDPDGLILAFGDSPRERPGRLLGFHWTKVHPDHPGL 230 (308)
T ss_dssp EEEECCSGGGHHHHHHHHHHHTTTCTTTSSCCHHHHHHHHTSTTCCGGGEEEEEEC------CCEEEEEEEECCTTSTTE
T ss_pred eeecccchHHHHHHHHHHHhhhhhccccccchhHHHHHHHhccccCcccccceeeecccccCCeEEEEEEEEEcCCCCcE
Confidence 44566778888888888554433322 2234444443321 12345578999999998874332 467
Q ss_pred eEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCccc-----Cccc-----e--eccc-ccccccCeeecCc
Q 007903 514 GEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTN-----GFPF-----L--RGRT-HSYYRLKFNCSSK 576 (585)
Q Consensus 514 aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~-----g~~~-----~--~~~a-~~YYrlGF~~~~~ 576 (585)
++|..++|+|+|||+|||+.|+..++ ++++++|+... +... . +..+ +.|.++||+..+.
T Consensus 231 ~~i~~~~V~p~~RGrGlG~~Ll~~~~----~~~~~~g~~~~~~~~~g~~~i~L~V~~~N~~A~~lY~~~GF~~~~~ 302 (308)
T d1p0ha_ 231 GEVYVLGVDPAAQRRGLGQMLTSIGI----VSLARRLGGRKTLDPAVEPAVLLYVESDNVAAVRTYQSLGFTTYSV 302 (308)
T ss_dssp EEEEEEEECGGGCSSSHHHHHHHHHH----HHHHHHC---------CCCEEEEEEETTCHHHHHHHHHTTCEEEEE
T ss_pred EEEeccEECHHHcCCCHHHHHHHHHH----HHHHHhCCcceeeecCCccEEEEeccCCCHHHHHHHHHCCCEEece
Confidence 89999999999999999999999999 77877766542 2111 0 1122 3455799998754
|
| >d1sqha_ d.108.1.5 (A:) Hypothetical protein cg14615-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: Hypothetical protein cg14615-pa domain: Hypothetical protein cg14615-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.51 E-value=4.4e-08 Score=98.20 Aligned_cols=117 Identities=14% Similarity=0.052 Sum_probs=82.1
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHHhcc---CeEEEE-EECCeEEEEEEEeeeccCCceEEeeEEEccC
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVV-EREGQIIACAALFPFFKEKCGEVAAIGVSPE 524 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i---~~~~Va-~~dg~IVG~~~l~~~~~~~~aeI~~L~V~Pe 524 (585)
..+|+++++|++.+.+++ . ...+.+.+.+...+ ..+.++ .++|++||++... ..++|..++|+|+
T Consensus 168 ~~lr~l~~~da~~i~~~W----~--~~~~~s~~~i~~~i~~~~~~gl~~~e~G~lv~w~~~~-----~~g~l~~l~V~p~ 236 (297)
T d1sqha_ 168 FEIRRLRAEDAAMVHDSW----P--NKGEGSLTYLQALVRFNKSLGICRSDTGELIAWIFQN-----DFSGLGMLQVLPK 236 (297)
T ss_dssp EEEECCCGGGHHHHHHTC----T--TCSSSCHHHHHHHHHHSCEEEEEETTTCCEEEEEEEC-----TTSSEEEEEECGG
T ss_pred CEeecCCHHHHHHHHHhc----C--CCCcchHHHHHHHHhhCCeEEEEECCCCCEEEEEEEC-----CCEEEEEEEEChH
Confidence 479999999999988773 1 11233455554443 344444 4569999998654 2678999999999
Q ss_pred CcCCcHHHHHHHHHHhhhHHHHHHcCCcccCccce---ecccccccccCeeecCccccc
Q 007903 525 CRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFL---RGRTHSYYRLKFNCSSKSFHI 580 (585)
Q Consensus 525 yRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g~~~~---~~~a~~YYrlGF~~~~~~~~~ 580 (585)
|||+|+|++|+++++ +.+++.|+........ ......|.++||+..+....+
T Consensus 237 ~r~~G~g~~l~~~~~----~~~~~~g~~~v~~~v~~~N~~s~~ly~klGF~~~~~~~~~ 291 (297)
T d1sqha_ 237 AERRGLGGLLAAAMS----REIARGEEITLTAWIVATNWRSEALLKRIGYQKDLVNEWI 291 (297)
T ss_dssp GCSSSHHHHHHHHHH----HHHHHHSCSCEEEEEETTCHHHHHHHHHHTCEEEEEEEEE
T ss_pred hcCCCHHHHHHHHHH----HHHHHCCCCEEEEEEcCCcHHHHHHHHHCCCEEeeEEEEE
Confidence 999999999999999 8888888765322111 123345668999988765544
|
| >d1nsla_ d.108.1.1 (A:) Probable acetyltransferase YdaF {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase YdaF species: Bacillus subtilis [TaxId: 1423]
Probab=98.51 E-value=1.8e-07 Score=85.48 Aligned_cols=122 Identities=10% Similarity=0.012 Sum_probs=82.5
Q ss_pred cccccccccCHHHHHHHHHHHHHc--cc----cccCCHHHHHhcc------------CeEEEEEECCeEEEEEEEeee-c
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVES--GA----LVRRTDEELLKAL------------DSFYVVEREGQIIACAALFPF-F 509 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~--~~----~~~~~~e~l~~~i------------~~~~Va~~dg~IVG~~~l~~~-~ 509 (585)
..+|+++++|++.+.+++...... .+ ..+.+.+.+.+.+ ...++...+|++||++.+... .
T Consensus 11 l~LR~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~~~~~~~~ 90 (180)
T d1nsla_ 11 ITIRLLEPKDAERLAELIIQNQQRLGKWLFFAENPSSADTYRETIIPDWRRQYADLNGIEAGLLYDGSLCGMISLHNLDQ 90 (180)
T ss_dssp EEEEECCGGGHHHHHHHHHTTTTTTTTTSCC----CCHHHHHHTHHHHHHHHHHTTSCEEEEEEETTEEEEEEEEEEEET
T ss_pred EEEEeCCHHHHHHHHHHHhcChHHHhhhcccCCCCccHHHHHHHHHHHHHHhhhccCcEEEEEEECCcEEEEEEeeeccc
Confidence 679999999999999996421111 11 1122333332211 345666789999999988743 3
Q ss_pred cCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHH-HHcCCcccCccce---ecccccccccCeeecC
Q 007903 510 KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSET-RYDHISTNGFPFL---RGRTHSYYRLKFNCSS 575 (585)
Q Consensus 510 ~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A-~~~gi~~~g~~~~---~~~a~~YYrlGF~~~~ 575 (585)
....++|. ++|+|+|||+|+|++++..++ +++ ...++........ ....+.|.|+||+..+
T Consensus 91 ~~~~~eig-~~i~~~~~g~G~~~e~~~~~~----~~af~~~~~~~i~~~v~~~N~~s~~~~~k~GF~~eg 155 (180)
T d1nsla_ 91 VNRKAEIG-YWIAKEFEGKGIITAACRKLI----TYAFEELELNRVAICAAVGNEKSRAVPERIGFLEEG 155 (180)
T ss_dssp TTTEEEEE-EEECGGGTTSSHHHHHHHHHH----HHHHHTSCCSEEEEEEETTCHHHHHHHHHHTCEEEE
T ss_pred CCCeEEEE-Eeecccccccccchhhhhhhh----hccccccCcceeecccccccHHHHHHHHHCCCEEEE
Confidence 34678885 889999999999999999999 877 5668876533222 2234456689999864
|
| >d1yrea1 d.108.1.1 (A:11-193) Hypothetical protein PA3270 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein PA3270 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.41 E-value=3.7e-07 Score=84.04 Aligned_cols=124 Identities=9% Similarity=-0.036 Sum_probs=85.0
Q ss_pred ccccccccccCHHHHHHHHHHHHHc--cccccCCHHHHHhcc-------CeEEEEEECCeEEEEEEEeee-ccCCceEEe
Q 007903 448 YEGTRTAKVTDLSGIKQIIQPLVES--GALVRRTDEELLKAL-------DSFYVVEREGQIIACAALFPF-FKEKCGEVA 517 (585)
Q Consensus 448 ~~~IR~at~~D~~~I~~Li~~~~~~--~~~~~~~~e~l~~~i-------~~~~Va~~dg~IVG~~~l~~~-~~~~~aeI~ 517 (585)
...+|+++++|++.+.++....... ....+...+.+...+ ...++...+|++||++.+... +..+.++|.
T Consensus 9 ~l~Lrpl~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~iG~i~l~~~~~~~~~~eiG 88 (183)
T d1yrea1 9 ALRLEPLVEADIPELVSLAEANREALQYMDGPTRPDWYRQSLAEQREGRALPLAVRLGVQLVGTTRFAEFLPALPACEIG 88 (183)
T ss_dssp TEEEEECCGGGHHHHHHHHHTTTTTTTTSSSTTSHHHHHHHHHHHHTTSEEEEEEEETTEEEEEEEEEEEETTTTEEEEE
T ss_pred CEEEEECCHHHHHHHHHHHhCCHHHhccCCCCCCHHHHHHHHHHHhCCCceEEEEEECCEEEEEEEeeeccccCCeEEEE
Confidence 3579999999999999985432111 112233344333322 244677889999999998742 345688998
Q ss_pred eEEEccCCcCCcHHHHHHHHHHhhhHHHH-HHcCCcccCccc---eecccccccccCeeecC
Q 007903 518 AIGVSPECRGQGQGDKLLGLCIWPLLSET-RYDHISTNGFPF---LRGRTHSYYRLKFNCSS 575 (585)
Q Consensus 518 ~L~V~PeyRGkGIGk~LL~~~~~~a~~~A-~~~gi~~~g~~~---~~~~a~~YYrlGF~~~~ 575 (585)
.+.++|+|||+|+|++.+..++ +++ ...++...-... .......+.|+||+..+
T Consensus 89 ~~~l~~~~~g~G~~~ea~~~l~----~~af~~lg~~~i~~~v~~~N~aS~~~~~k~Gf~~eg 146 (183)
T d1yrea1 89 WTWLDQAQHGSGLNRMIKYLML----KHAFDNLRMVRVQLSTAASNLRAQGAIDKLGAQREG 146 (183)
T ss_dssp EEEECGGGTTTTHHHHHHHHHH----HHHHHTSCCSEEEEEEETTCHHHHHHHHHHTCEEEE
T ss_pred EEEecHHHcCCccchhHHHHHh----hhhhhccCcceEEeecccCCHHHHhhHhccCeEEEE
Confidence 7789999999999999999999 776 456887643221 12234457789998764
|
| >d1s7ka1 d.108.1.1 (A:3-176) L7/L12-Ribosomal-protein-serine acetyltransferase RimL {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: L7/L12-Ribosomal-protein-serine acetyltransferase RimL species: Salmonella typhimurium [TaxId: 90371]
Probab=98.38 E-value=9.1e-07 Score=80.41 Aligned_cols=123 Identities=11% Similarity=0.112 Sum_probs=80.5
Q ss_pred cccccccccccCHHHHHHHHHHHHH--ccccccC-----CHH----HHHhcc-------CeEEEEEECCeEEEEEEEeee
Q 007903 447 LYEGTRTAKVTDLSGIKQIIQPLVE--SGALVRR-----TDE----ELLKAL-------DSFYVVEREGQIIACAALFPF 508 (585)
Q Consensus 447 ~~~~IR~at~~D~~~I~~Li~~~~~--~~~~~~~-----~~e----~l~~~i-------~~~~Va~~dg~IVG~~~l~~~ 508 (585)
....+|+++++|++.+.+++..-.. ..+ .+| +.+ .+.... ..++++..++++||++.+...
T Consensus 7 ~~l~LR~~~~~d~~~l~~~~~~~~~~l~~~-~~~~~~~~~~e~~~~~i~~~~~~~~~~~~~~~~i~~~~~~iG~~~~~~~ 85 (174)
T d1s7ka1 7 TTLELRAADESHVPALHQLVLKNKAWLQQS-LDWPQYVTSQEETRKHVQGNILLHQRGYAKMYLIFCQNEMAGVLSFNAI 85 (174)
T ss_dssp SSEEEEECCGGGHHHHHHHHHHC--------------------CHHHHHHHHHHHHHTSCEEEEEEETTEEEEEEEEEEE
T ss_pred CCEEEEcCCHHHHHHHHHHHHcCHHHHHhh-cCCCCCCCCHHHHHHHHHHHHHHHHcCCCceeEEEEcCCceEEEeeccc
Confidence 3467999999999999998643110 011 111 111 121111 356777889999999998643
Q ss_pred -ccCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHH-HHcCCcccCcc---ceecccccccccCeeecC
Q 007903 509 -FKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSET-RYDHISTNGFP---FLRGRTHSYYRLKFNCSS 575 (585)
Q Consensus 509 -~~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A-~~~gi~~~g~~---~~~~~a~~YYrlGF~~~~ 575 (585)
+....++|. ++|+|+|||+|+|++++..++ +++ ...++.+.... ......+.+.|+||+..+
T Consensus 86 ~~~~~~~eig-~~i~~~~~gkG~~~ea~~~l~----~~~f~~~~~~~l~a~~~~~N~~S~~~~~k~Gf~~eG 152 (174)
T d1s7ka1 86 EPINKAAYIG-YWLDESFQGQGIMSQSLQALM----THYARRGDIRRFVIKCRVDNQASNAVARRNHFTLEG 152 (174)
T ss_dssp ETTTTEEEEE-EEECGGGCSSSHHHHHHHHHH----HHHHHHCSCCEEEEEEETTCHHHHHHHHHTTCEEEE
T ss_pred cCCCCeEEEE-EEEeehhccchhHHHHHHHHH----hhhhhhcCcccceeecccCcHHHHHHHHHCCCEEEE
Confidence 234567874 789999999999999999999 666 45677654222 222344557789999764
|
| >d1yk3a1 d.108.1.1 (A:10-207) Hypothetical protein Rv1347c/MT1389 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein Rv1347c/MT1389 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.31 E-value=5.4e-07 Score=83.99 Aligned_cols=123 Identities=11% Similarity=-0.060 Sum_probs=85.1
Q ss_pred cccccccccCHHHHHHHHHHHH-HccccccCCHHHHHhcc--------CeEEEEEECCeEEEEEEEeeec----------
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLV-ESGALVRRTDEELLKAL--------DSFYVVEREGQIIACAALFPFF---------- 509 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~-~~~~~~~~~~e~l~~~i--------~~~~Va~~dg~IVG~~~l~~~~---------- 509 (585)
..+|+++++|++.|.++++... ...+..+++.+...+.+ ..+++++.+++++|++.+....
T Consensus 34 ~~LR~~~~~D~~~l~~w~~dp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 113 (198)
T d1yk3a1 34 YGLRVAQLTDAEMLAEWMNRPHLAAAWEYDWPASRWRQHLNAQLEGTYSLPLIGSWHGTDGGYLELYWAAKDLISHYYDA 113 (198)
T ss_dssp EEEEECCGGGHHHHHHHHTSHHHHHHHCCCCCHHHHHHHHHHHHTSSSEEEEEEEETTEEEEEEEEEEGGGBGGGGSSCC
T ss_pred eEEEeCCHHHHHHHHHHHcChhhhhccCCCCCHHHHHHHHHHHhcCCccceEEEEECCEEEEEEEEEecccccccccccc
Confidence 4799999999999999975432 22233445555544332 3567888999999999886321
Q ss_pred cCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHH--HHcCCcccCccc---eecccccccccCeeecC
Q 007903 510 KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSET--RYDHISTNGFPF---LRGRTHSYYRLKFNCSS 575 (585)
Q Consensus 510 ~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A--~~~gi~~~g~~~---~~~~a~~YYrlGF~~~~ 575 (585)
.+....+..+.++|+|||+|+|++++..++ +++ +..++....... .....+.|.|+||+..+
T Consensus 114 ~~~~~~~~~~~~~~~~~GkG~gt~~l~~li----~~~f~~~~~~~ri~~~v~~~N~~s~rl~erlGF~~~g 180 (198)
T d1yk3a1 114 DPYDLGLHAAIADLSKVNRGFGPLLLPRIV----ASVFANEPRCRRIMFDPDHRNTATRRLCEWAGCKFLG 180 (198)
T ss_dssp CTTCEEEEEEESCHHHHTTTHHHHHHHHHH----HHHHHHCTTCCEEEECCBTTCHHHHHHHHHHTCEEEE
T ss_pred CCCceEEEEEEEChhhcCCcHHHHHHHHHH----HHHHhhcCCccEEEEEeCCCCHHHHHHHHHcCCEEEe
Confidence 123456778999999999999999999999 654 345766532221 22344457789999775
|
| >d2fcka1 d.108.1.1 (A:1-178) Putative ribosomal-protein-serine acetyltransferase VC1889 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Putative ribosomal-protein-serine acetyltransferase VC1889 species: Vibrio cholerae [TaxId: 666]
Probab=98.22 E-value=1.2e-06 Score=80.03 Aligned_cols=122 Identities=12% Similarity=0.011 Sum_probs=79.7
Q ss_pred cccccccccCHHHHHHHHHHHHH-ccc----cccCCHHHHHhcc-----------CeEEEE-E-ECCeEEEEEEEeee-c
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVE-SGA----LVRRTDEELLKAL-----------DSFYVV-E-REGQIIACAALFPF-F 509 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~-~~~----~~~~~~e~l~~~i-----------~~~~Va-~-~dg~IVG~~~l~~~-~ 509 (585)
..+|+++++|++.+.++++.... ..+ ..+.+.+.....+ ..+|++ . .++++||++.+... .
T Consensus 12 l~LR~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~iG~~~l~~~~~ 91 (178)
T d2fcka1 12 LQLRLITADEAEELVQCIRQSQTLHQWVDWCHALFSQQEAEQFIQATRLNWVKAEAYGFGVFERQTQTLVGMVAINEFYH 91 (178)
T ss_dssp EEEECCCGGGHHHHHHHHHTCSSGGGTSCC----CCHHHHHHHHHHHHHHHHTTSCEEEEEEETTTCCEEEEEEEEEEEG
T ss_pred EEEEeCCHHHHHHHHHHHcCCHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHcCCceEEEeeeccCCceEEEEeeccccc
Confidence 57999999999999998653211 111 1122333322211 234444 3 36899999998643 3
Q ss_pred cCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHH-HHcCCcccCcc---ceecccccccccCeeecC
Q 007903 510 KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSET-RYDHISTNGFP---FLRGRTHSYYRLKFNCSS 575 (585)
Q Consensus 510 ~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A-~~~gi~~~g~~---~~~~~a~~YYrlGF~~~~ 575 (585)
....++|. ++|+|+|||+|+|++++..++ +++ ...++.+.... ......+.|.++||+..+
T Consensus 92 ~~~~~eig-~~i~~~~~g~G~~~e~l~~l~----~~af~~~~~~~i~~~~~~~N~~s~~l~ek~GF~~eg 156 (178)
T d2fcka1 92 TFNMASLG-YWIGDRYQRQGYGKEALTALI----LFCFERLELTRLEIVCDPENVPSQALALRCGANREQ 156 (178)
T ss_dssp GGTEEEEE-EEECHHHHTTTHHHHHHHHHH----HHHHHTSCCSEEEEEECTTCHHHHHHHHHTTCEEEE
T ss_pred CCCeEEEE-Eeeecccccchhhhhhhheee----eeeccccCcceeeEecCCCcHHHHHHHHHCCCEEEE
Confidence 45678885 799999999999999999999 777 45577664221 122344567789999764
|
| >d1p0ha_ d.108.1.1 (A:) Mycothiol synthase MshD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Mycothiol synthase MshD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.22 E-value=3.5e-07 Score=90.03 Aligned_cols=95 Identities=15% Similarity=0.178 Sum_probs=66.9
Q ss_pred cccccCHHHHHHHHHHHHHccccccCCHHHHHhcc------CeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCCc
Q 007903 453 TAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL------DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECR 526 (585)
Q Consensus 453 ~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i------~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyR 526 (585)
.++++|.+.+.+|+.......-..+...+.+.... ..+++++.+|++|||+.+.+ ..+....+..++|+|+||
T Consensus 7 ~l~~~d~~~v~~l~~~~~~~d~~~p~~e~~~~~~~~~~~~~~~~~~~~~~g~~vG~~~~~~-~~~~~~~~~~~~V~P~~R 85 (308)
T d1p0ha_ 7 ALTADEQRSVRALVTATTAVDGVAPVGEQVLRELGQQRTEHLLVAGSRPGGPIIGYLNLSP-PRGAGGAMAELVVHPQSR 85 (308)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHSSCSSCHHHHHHTTSSSSEEEEEECSSTTCCEEEEEEEEC-C---CCCEEEEEECGGGC
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCCCccHHHHHhhhccCCCceEEEEEecCCEEEEEEEEEe-cCCCceeEEEEEECHHHh
Confidence 48999999999998766543333344444443322 22445667899999999874 344456777899999999
Q ss_pred CCcHHHHHHHHHHhhhHHHHHHcCCc
Q 007903 527 GQGQGDKLLGLCIWPLLSETRYDHIS 552 (585)
Q Consensus 527 GkGIGk~LL~~~~~~a~~~A~~~gi~ 552 (585)
|+|||++|+++++ +.++..+..
T Consensus 86 ~~GiG~~Ll~~~~----~~~~~~~~~ 107 (308)
T d1p0ha_ 86 RRGIGTAMARAAL----AKTAGRNQF 107 (308)
T ss_dssp SSSHHHHHHHHHH----HHTTTCCEE
T ss_pred cCCHHHHHHHHHH----HHHhhhccc
Confidence 9999999999999 665555443
|
| >d2fsra1 d.108.1.1 (A:4-167) Probable acetyltranferase Atu2435 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltranferase Atu2435 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=97.99 E-value=9e-06 Score=71.83 Aligned_cols=124 Identities=9% Similarity=-0.070 Sum_probs=82.0
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHHhcc-----------CeEEEE-E-ECCeEEEEEEEeeeccCCceE
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL-----------DSFYVV-E-REGQIIACAALFPFFKEKCGE 515 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i-----------~~~~Va-~-~dg~IVG~~~l~~~~~~~~ae 515 (585)
..+|+++++|++.+.++++......+..+++.....+.+ ..++++ . .++.++|++.+.........+
T Consensus 10 L~LRp~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ig~~~~~~~~~~~~~~ 89 (164)
T d2fsra1 10 LTLRPLAMADFPAYRDFMASPRSTGVGGPYDLPSTWGVFCHDLANWHFFGHGALMIDLGETGECIGQIGINHGPLFPEKE 89 (164)
T ss_dssp EEEECCCGGGHHHHHHHHHSGGGGGGTCCCCHHHHHHHHHHHHHHHHHHSCCEEEEEETTTTEEEEEEEEECSTTCSSCE
T ss_pred EEEecCCHHHHHHHHHHHcChhhhhcCCCCCcHHHHHHHHHHHHHHhhcCcceEEEEEcCCCeEEEEEEeeccCccccce
Confidence 479999999999999997544333333344443322221 234444 3 358899999887433334555
Q ss_pred EeeEEEccCCcCCcHHHHHHHHHHhhhHHHH-HHcCCcccCccc---eecccccccccCeeecCcc
Q 007903 516 VAAIGVSPECRGQGQGDKLLGLCIWPLLSET-RYDHISTNGFPF---LRGRTHSYYRLKFNCSSKS 577 (585)
Q Consensus 516 I~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A-~~~gi~~~g~~~---~~~~a~~YYrlGF~~~~~~ 577 (585)
+ .+.+.|+|+|+|+|..++..++ .++ +..++.+..... .....+.|.|+||+..+..
T Consensus 90 ~-g~~~~~~~~~~g~~~~~~~~~~----~~~~~~l~~~~v~~~v~~~N~~S~rl~ek~GF~~eg~~ 150 (164)
T d2fsra1 90 L-GWLLYEGHEGRGYAAEAAVALR----DWAFETLNLPTLVSYVSPQNRKSAAVAERIGGTLDPLA 150 (164)
T ss_dssp E-EEEECTTCTTSSHHHHHHHHHH----HHHHHHSCCSCEEEEECTTCHHHHHHHHHTTCEECTTS
T ss_pred E-eeEeeeeeccccccccceeEEE----eeccccccceeEEEEECcCCHHHHHHHHHCCCEEeeeE
Confidence 5 5799999999999999999999 543 567887643222 2234456789999987553
|
| >d1ylea1 d.108.1.8 (A:1-338) Arginine N-succinyltransferase, alpha chain, AstA {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: AstA-like domain: Arginine N-succinyltransferase, alpha chain, AstA species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.39 E-value=0.00015 Score=72.13 Aligned_cols=90 Identities=16% Similarity=0.184 Sum_probs=63.0
Q ss_pred cccccccccCHHHHHHHHHHHHHccccccCCHHHHHhcc-----------------CeEEEEEE--CCeEEEEEEEee--
Q 007903 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL-----------------DSFYVVER--EGQIIACAALFP-- 507 (585)
Q Consensus 449 ~~IR~at~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~i-----------------~~~~Va~~--dg~IVG~~~l~~-- 507 (585)
+.||+++.+|+++|.+|....-.--..+|.+.+.+.+.+ ..+||.++ .|+|||++.+..
T Consensus 2 lviRpv~~~Dl~~L~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~Sf~~~~~~~~~~~YlFVLED~~~g~vvGts~I~a~v 81 (338)
T d1ylea1 2 LVMRPAQAADLPQVQRLAADSPVGVTSLPDDAERLRDKILASEASFAAEVSYNGEESYFFVLEDSASGELVGCSAIVASA 81 (338)
T ss_dssp EEEEECCGGGHHHHHHHHHHSCTTCTTSCSCHHHHHHHHHHHHHHHHCTTCCCSCCEEEEEEEETTTCCEEEEEEEESST
T ss_pred eEEEeCchhhHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHHhccCCCCCCccEEEEEEeCCCCeEEEEEeEEEee
Confidence 468999999999999994322111124566666655443 25667776 589999998831
Q ss_pred -----e----------------------------ccCCceEEeeEEEccCCcCCcHHHHHHHHH
Q 007903 508 -----F----------------------------FKEKCGEVAAIGVSPECRGQGQGDKLLGLC 538 (585)
Q Consensus 508 -----~----------------------------~~~~~aeI~~L~V~PeyRGkGIGk~LL~~~ 538 (585)
+ .-..+.||..++++|+||+.|.|+.|=..-
T Consensus 82 G~~~Pfy~yr~~~~vh~S~~L~~~~~~~~L~L~~d~tg~sEl~tLfL~p~~R~~~~G~LLS~~R 145 (338)
T d1ylea1 82 GFSEPFYSFRNETFVHASRSLSIHNKIHVLSLCHDLTGNSLLTSFYVQRDLVQSVYAELNSRGR 145 (338)
T ss_dssp TSSSCCCEEEEEEEEEEETTTTEEEEEEEEEEECTTTTSEEEEEEEECGGGTTSHHHHHHHHHH
T ss_pred cCCCCcEEEEeCceeecccccCCccccceEEEeccCCCCeeEEEEEECHHHcCCcchhHHHHHH
Confidence 0 013567999999999999999998775543
|
| >d1ro5a_ d.108.1.3 (A:) Autoinducer synthesis protein LasI {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: Autoinducer synthetase domain: Autoinducer synthesis protein LasI species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.84 E-value=0.0016 Score=60.02 Aligned_cols=83 Identities=12% Similarity=0.132 Sum_probs=58.4
Q ss_pred CeEEEEEECCeEEEEEEEeeec--------------------cCCceEEeeEEEccCCcCCc----HHHHHHHHHHhhhH
Q 007903 488 DSFYVVEREGQIIACAALFPFF--------------------KEKCGEVAAIGVSPECRGQG----QGDKLLGLCIWPLL 543 (585)
Q Consensus 488 ~~~~Va~~dg~IVG~~~l~~~~--------------------~~~~aeI~~L~V~PeyRGkG----IGk~LL~~~~~~a~ 543 (585)
..++++..+|+++|++.+.+.. .+...|+.+++|+|++|+++ ++..|+..+.
T Consensus 54 ~~~lv~~~~g~~vG~~Rl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~E~sR~aV~~~~r~~~r~~~~~~~L~~~~~---- 129 (197)
T d1ro5a_ 54 PYYMLIQEDGQVFGCWRILDTTGPYMLKNTFPELLHGKEAPCSPHIWELSRFAINSGQKGSLGFSDCTLEAMRALA---- 129 (197)
T ss_dssp CEEEEEEETTEEEEEEEEEETTSCCHHHHTCGGGGTTCCCCCCTTEEEEEEEEECCSTTCCSCSHHHHHHHHHHHH----
T ss_pred cEEEEeccccceEEEEEeecCCCCCcccccchhhhcCccccCCCceEEEEEEEEccccccccchhHHHHHHHHHHH----
Confidence 4677778899999999986421 23467999999999996554 7788888888
Q ss_pred HHHHHcCCcccCccceecccccccccCeeec
Q 007903 544 SETRYDHISTNGFPFLRGRTHSYYRLKFNCS 574 (585)
Q Consensus 544 ~~A~~~gi~~~g~~~~~~~a~~YYrlGF~~~ 574 (585)
+++.++|+...-...-..-...|.++||.+.
T Consensus 130 ~~a~~~G~~~~~~~~~~~~~r~~~r~G~~~~ 160 (197)
T d1ro5a_ 130 RYSLQNDIQTLVTVTTVGVEKMMIRAGLDVS 160 (197)
T ss_dssp HHHHTTTCCEEEEEEEHHHHHHHHHTTCEEE
T ss_pred HHHHHCCCCEEEEEecHHHHHHHHHCCCcEE
Confidence 8999999886421111122233457998654
|
| >d1xmta_ d.108.1.1 (A:) Hypothetical protein AT1g77540 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein AT1g77540 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=96.38 E-value=0.0023 Score=52.20 Aligned_cols=41 Identities=20% Similarity=0.118 Sum_probs=36.1
Q ss_pred cCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCccc
Q 007903 510 KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTN 554 (585)
Q Consensus 510 ~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~ 554 (585)
.++...|....|.|++||||+|++|++.++ +.|++.|++-.
T Consensus 29 ~~~~i~i~HT~V~~~~rGqGia~~Lv~~al----~~ar~~g~kV~ 69 (95)
T d1xmta_ 29 NGKVMDLVHTYVPSFKRGLGLASHLCVAAF----EHASSHSISII 69 (95)
T ss_dssp TTTEEEEEEEECCGGGTTSCHHHHHHHHHH----HHHHHTTCEEE
T ss_pred CCcEEEEEEEEeCcccCCChHHHHHHHHHH----HHHHHCCCEEE
Confidence 345667889999999999999999999999 99999998754
|
| >d1lrza3 d.108.1.4 (A:166-244,A:310-412) Methicillin resistance protein FemA {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: FemXAB nonribosomal peptidyltransferases domain: Methicillin resistance protein FemA species: Staphylococcus aureus [TaxId: 1280]
Probab=95.50 E-value=0.018 Score=51.56 Aligned_cols=61 Identities=13% Similarity=-0.108 Sum_probs=50.2
Q ss_pred eEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcccC
Q 007903 489 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNG 555 (585)
Q Consensus 489 ~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~g 555 (585)
.++++..+|++||.+.+.. .++.++....+.+|++|..+.+..|+-+++ ++|.+.|+....
T Consensus 72 ~l~~a~~~~~~ia~~l~~~--~~~~~~y~~~~~~~~~~~~~~~~ll~~~~i----~~a~~~G~~~~D 132 (182)
T d1lrza3 72 LVPLAYINELPISAGFFFI--NPFEVVYYAGGTSNAFRHFAGSYAVQWEMI----NYALNHGIDRYN 132 (182)
T ss_dssp ECEEEEEEEEEEEEEEEEE--CSSCEEEEEEEECGGGGGGCHHHHHHHHHH----HHHHHTTCCEEE
T ss_pred eeeeeecCCccEEEEEEEe--echhheeeeceeccchhhcCchHHHHHHHH----HHHHHcCCcEEE
Confidence 4677788999999877653 345666666789999999999999999999 999999998743
|
| >d1kzfa_ d.108.1.3 (A:) Acyl-homoserinelactone synthase EsaI {Pantoea stewartii subsp. stewartii [TaxId: 66271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: Autoinducer synthetase domain: Acyl-homoserinelactone synthase EsaI species: Pantoea stewartii subsp. stewartii [TaxId: 66271]
Probab=94.07 E-value=0.024 Score=52.35 Aligned_cols=83 Identities=10% Similarity=-0.019 Sum_probs=58.7
Q ss_pred CeEEEEEECCeEEEEEEEeeec------------------cCCceEEeeEEEccCCcCC------cHHHHHHHHHHhhhH
Q 007903 488 DSFYVVEREGQIIACAALFPFF------------------KEKCGEVAAIGVSPECRGQ------GQGDKLLGLCIWPLL 543 (585)
Q Consensus 488 ~~~~Va~~dg~IVG~~~l~~~~------------------~~~~aeI~~L~V~PeyRGk------GIGk~LL~~~~~~a~ 543 (585)
..+++...+|++||++.+.+.. .....|+.+++|+|++|+. .+...|+..+.
T Consensus 52 ~~~lv~~~~g~~vG~~Rllp~~~~~~l~~~f~~l~~~~~~~~~i~E~sR~~V~~~~r~~~~~~~~~v~~~L~~~~~---- 127 (210)
T d1kzfa_ 52 TRYILGICEGQLVCSVRFTSLDRPNMITHTFQHCFSDVTLPAYGTESSRFFVDKARARALLGEHYPISQVLFLAMV---- 127 (210)
T ss_dssp CEEEEEEETTEEEEEEEEEETTSCCCCCCCTHHHHTTSCCCSSCEEEEEEEECHHHHHHHHCTTCCHHHHHHHHHH----
T ss_pred CEEEEEEcCCeEEEEEEecCCCCCcchhhcchhhccCCCCCCCeEEEEEEEeccccccccccccchHHHHHHHHHH----
Confidence 4577777899999999886421 2346899999999999865 37888999999
Q ss_pred HHHHHcCCcccCccceecccccccccCeeec
Q 007903 544 SETRYDHISTNGFPFLRGRTHSYYRLKFNCS 574 (585)
Q Consensus 544 ~~A~~~gi~~~g~~~~~~~a~~YYrlGF~~~ 574 (585)
+++.++|+...-......-...|.+.||.+.
T Consensus 128 ~~a~~~Gi~~~~~v~~~~~~r~~~r~G~~~~ 158 (210)
T d1kzfa_ 128 NWAQNNAYGNIYTIVSRAMLKILTRSGWQIK 158 (210)
T ss_dssp HHHHHTTCSEEEEEEEHHHHHHHHHHCCCCE
T ss_pred HHHHHCCCCEEEEEeCHHHHHHHHHCCCCeE
Confidence 9999999986422111112233556777543
|
| >d2giva1 d.108.1.1 (A:4-274) Probable histone acetyltransferase MYST1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable histone acetyltransferase MYST1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.66 E-value=0.13 Score=48.71 Aligned_cols=50 Identities=16% Similarity=0.191 Sum_probs=39.4
Q ss_pred eEEEEEEEeeeccCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCc
Q 007903 498 QIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHIS 552 (585)
Q Consensus 498 ~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~ 552 (585)
.+|||.+=.. .+....-+.+|.|.|.||++|+|+.|++..- +.++..|..
T Consensus 121 h~vGYFSKEk-~s~~~~NLsCIltlP~yQrkGyG~lLI~fSY----eLSr~E~~~ 170 (271)
T d2giva1 121 HIVGYFSKEK-ESPDGNNVACILTLPPYQRRGYGKFLIAFSY----ELSKLESTV 170 (271)
T ss_dssp EEEEEEEEES-SCTTCEEESCEEECGGGCSSSHHHHHHHHHH----HHHHHTTCC
T ss_pred eEEEeeeeEe-ccCCCceeeeeeccCHHHhcCHhHhHHhhhh----hhhhccCCC
Confidence 5999977653 2334467899999999999999999999988 777766643
|
| >d1boba_ d.108.1.1 (A:) Histone acetyltransferase HAT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Histone acetyltransferase HAT1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=92.57 E-value=0.16 Score=49.48 Aligned_cols=43 Identities=16% Similarity=0.375 Sum_probs=35.6
Q ss_pred CeEEEEEEEeeec-------------cCCceEEeeEEEccCCcCCcHHHHHHHHHH
Q 007903 497 GQIIACAALFPFF-------------KEKCGEVAAIGVSPECRGQGQGDKLLGLCI 539 (585)
Q Consensus 497 g~IVG~~~l~~~~-------------~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~ 539 (585)
..++||+..+.++ +.....|..+-|.|.|||+|+|++|++.+-
T Consensus 180 ~~~~Gy~T~Y~~~~Y~~~~~f~~~~~~~~R~RISQ~LILPPyQ~kG~G~~L~~~iy 235 (315)
T d1boba_ 180 KELIGFVTTYKYWHYLGAKSFDEDIDKKFRAKISQFLIFPPYQNKGHGSCLYEAII 235 (315)
T ss_dssp CCEEEEEEEEEECCC---------CCCCEEEEEEEEEECGGGCSSSHHHHHHHHHH
T ss_pred CcccceeeeeeeeeccccccccccccccccceeEEEEEeCccccCCchHHHHHHHH
Confidence 4799999987542 122467999999999999999999999998
|
| >d1ne9a2 d.108.1.4 (A:165-335) Peptidyltransferase FemX {Weissella viridescens [TaxId: 1629]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: FemXAB nonribosomal peptidyltransferases domain: Peptidyltransferase FemX species: Weissella viridescens [TaxId: 1629]
Probab=92.37 E-value=0.35 Score=41.99 Aligned_cols=94 Identities=14% Similarity=0.122 Sum_probs=55.6
Q ss_pred ccCHHHHHHHHHHHHHccccccCCHHHHHhc---c----CeEEEEEECCeEEEEEEEeeeccCCceEEeeEEEccCCcCC
Q 007903 456 VTDLSGIKQIIQPLVESGALVRRTDEELLKA---L----DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQ 528 (585)
Q Consensus 456 ~~D~~~I~~Li~~~~~~~~~~~~~~e~l~~~---i----~~~~Va~~dg~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGk 528 (585)
++|++.+.+++....+..-..+.+.+.+... + ..++++..+|++|+.+.+... ++.++...-+ .+++...
T Consensus 25 ~e~~~~f~~l~~~~~~r~g~~~~~~~~~~~l~~~~~~~~~~l~~~~~~g~~va~~l~~~~--~~~~~y~~~a-~~~~~~~ 101 (171)
T d1ne9a2 25 ATELDEFFKTYTTMAERHGITHRPIEYFQRMQAAFDADTMRIFVAEREGKLLSTGIALKY--GRKIWYMYAG-SMDGNTY 101 (171)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHSCTTTEEEEEEEETTEEEEEEEEEEE--TTEEEEEEEE-ECSSCCT
T ss_pred HHHHHHHHHHHHHHhccccCCCCCHHHHHHHHHhcCCCeEEEEEEEeCCeEEEEEEEEEE--CCEEEEEEcc-ccccccc
Confidence 3455555565544433332223333333222 2 346778889999998766532 3344433334 4455566
Q ss_pred cHHHHHHHHHHhhhHHHHHHcCCcccCc
Q 007903 529 GQGDKLLGLCIWPLLSETRYDHISTNGF 556 (585)
Q Consensus 529 GIGk~LL~~~~~~a~~~A~~~gi~~~g~ 556 (585)
.-+..|+-+++ +++++.|+....+
T Consensus 102 ~~~~~L~~~~i----~~~~~~G~~~~D~ 125 (171)
T d1ne9a2 102 YAPYAVQSEMI----QWALDTNTDLYDL 125 (171)
T ss_dssp THHHHHHHHHH----HHHHHTTCSEEEE
T ss_pred ccHHHHHHHHH----HHHHHcCCcEEEe
Confidence 66888888888 9999999987544
|
| >d1rxta1 d.108.1.2 (A:78-218) N-myristoyl transferase, NMT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-myristoyl transferase, NMT domain: N-myristoyl transferase, NMT species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.36 E-value=0.26 Score=42.21 Aligned_cols=56 Identities=13% Similarity=0.132 Sum_probs=46.2
Q ss_pred EECCeEEEEEEEeeec------cCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCcc
Q 007903 494 EREGQIIACAALFPFF------KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHIST 553 (585)
Q Consensus 494 ~~dg~IVG~~~l~~~~------~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~ 553 (585)
..++++|||+...|.. .-+..+|.-|+||+++|.+|++-.|++++. ..+...|+-+
T Consensus 63 ~~~~kLVgfIs~~P~~i~i~~~~~~~~~InFLCVhKklR~k~lAPvLI~Eit----Rr~n~~gI~q 124 (141)
T d1rxta1 63 VSSRKLVGFISAIPANIHIYDTEKKMVEINFLCVHKKLRSKRVAPVLIREIT----RRVHLEGIFQ 124 (141)
T ss_dssp SSSSCEEEEECCEECCCCCSSSCCCCEECCCCEECSSCCCSSSHHHHHHHHH----HHHTTTTCCC
T ss_pred ccCCeEEEEEeceEEEEEEeCCEeEEEEEEEEEEchhHhhcCCcHHHHHHHH----HHhhccCeEE
Confidence 4579999999887632 135789999999999999999999999998 7777777654
|
| >d2ozua1 d.108.1.1 (A:507-776) Histone acetyltransferase MYST3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Histone acetyltransferase MYST3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.70 E-value=0.25 Score=46.79 Aligned_cols=50 Identities=12% Similarity=0.170 Sum_probs=38.8
Q ss_pred eEEEEEEEeeeccCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCc
Q 007903 498 QIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHIS 552 (585)
Q Consensus 498 ~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~ 552 (585)
.+|||..=.. ......-+.+|.|.|.||++|+|+.|++..- +.++..|..
T Consensus 121 h~vGyFSKEk-~s~~~~NLsCIltLP~~QrkGyG~lLI~fSY----eLSr~Eg~~ 170 (270)
T d2ozua1 121 HLVGYFSKEK-HCQQKYNVSCIMILPQYQRKGYGRFLIDFSY----LLSKREGQA 170 (270)
T ss_dssp EEEEEEEEES-SCTTCEEESEEEECGGGTTSSHHHHHHHHHH----HHHHHTTCC
T ss_pred EEEeecceec-ccccCceeeeeeccchhhhcchhHHHHHHhh----hhhhccCCC
Confidence 5888866542 2233467999999999999999999999998 667766643
|
| >d1fy7a_ d.108.1.1 (A:) Histone acetyltransferase ESA1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Histone acetyltransferase ESA1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=90.63 E-value=0.24 Score=47.06 Aligned_cols=50 Identities=14% Similarity=0.139 Sum_probs=38.6
Q ss_pred eEEEEEEEeeeccCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCc
Q 007903 498 QIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHIS 552 (585)
Q Consensus 498 ~IVG~~~l~~~~~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~ 552 (585)
.+|||.+=.. ......-+.+|.|.|.||++|+|+.|++..- +.++..+..
T Consensus 124 h~vGyFSKEk-~s~~~nNLaCIltLP~~QrkGyG~~LI~fSY----eLSr~E~~~ 173 (273)
T d1fy7a_ 124 HLVGYFSKEK-ESADGYNVACILTLPQYQRMGYGKLLIEFSY----ELSKKENKV 173 (273)
T ss_dssp EEEEEEEEES-SCTTCEEESCEEECGGGCSSSHHHHHHHHHH----HHHHHTTCC
T ss_pred eeeeecceec-cccCCceeEEEEecChHHhcchhhhHHHHHH----HHhhhcccC
Confidence 5888866542 2223467999999999999999999999998 777766553
|
| >d1iyka1 d.108.1.2 (A:60-224) N-myristoyl transferase, NMT {Yeast (Candida albicans) [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-myristoyl transferase, NMT domain: N-myristoyl transferase, NMT species: Yeast (Candida albicans) [TaxId: 5476]
Probab=89.55 E-value=0.73 Score=40.32 Aligned_cols=56 Identities=14% Similarity=0.175 Sum_probs=45.6
Q ss_pred ECCeEEEEEEEeeec---c--C---CceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCccc
Q 007903 495 REGQIIACAALFPFF---K--E---KCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTN 554 (585)
Q Consensus 495 ~dg~IVG~~~l~~~~---~--~---~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~ 554 (585)
.++++|||+...|.. . + +..+|.-|+||+++|.+|++-.|++++. ..+...|+-+.
T Consensus 86 ~~~kLvgfIs~~P~~i~i~~~~~~~~~~~INFLCVhKklR~KrlAPvLI~Eit----Rr~n~~gI~qA 149 (165)
T d1iyka1 86 STGKLVAFIAATPVTFKLNKSNKVIDSVEINFLCIHKKLRNKRLAPVLIKEIT----RRVNKQNIWQA 149 (165)
T ss_dssp TTCCEEEEEEEEEEEEEETTTTEEEEEEEEEEEEECGGGTTSSCHHHHHHHHH----HHHHTTTCCCE
T ss_pred cCCcEEEEEecceEEEEEecCCcEEEEEEEEEEEEchhHhhcCCcHHHHHHHH----HHhhccCeEEE
Confidence 468999999887631 1 1 4588999999999999999999999998 77777777653
|
| >d1iica1 d.108.1.2 (A:34-218) N-myristoyl transferase, NMT {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-myristoyl transferase, NMT domain: N-myristoyl transferase, NMT species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=88.27 E-value=0.3 Score=43.92 Aligned_cols=56 Identities=13% Similarity=0.090 Sum_probs=45.5
Q ss_pred ECCeEEEEEEEeeec------cCCceEEeeEEEccCCcCCcHHHHHHHHHHhhhHHHHHHcCCccc
Q 007903 495 REGQIIACAALFPFF------KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTN 554 (585)
Q Consensus 495 ~dg~IVG~~~l~~~~------~~~~aeI~~L~V~PeyRGkGIGk~LL~~~~~~a~~~A~~~gi~~~ 554 (585)
.++++|||+...|.. .-+..+|.-|+||+++|.+|++-.|++++. ..+...|+-+.
T Consensus 108 ~~~KLvg~Is~~P~~i~i~~~~~~~~~VnFLCVhkk~R~K~lAPvLI~Eit----Rr~n~~~i~qa 169 (185)
T d1iica1 108 ETQKLVAFISAIPVTLGVRGKQVPSVEINFLCVHKQLRSKRLTPVLIKEIT----RRVNKCDIWHA 169 (185)
T ss_dssp TTCCEEEEEEEEEEEEEETTEEEEEEEEEEEEECGGGTTSSCHHHHHHHHH----HHHHTTTCCCE
T ss_pred cCCcEEEEEeeeEEEEEEcCeEEEEEEEEEEEEchhHhhcCCcHHHHHHHH----HHhcccCeEEE
Confidence 368999999887632 124678999999999999999999999998 77777777543
|