Citrus Sinensis ID: 007920


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-----
MLLISVSYGEFAPNEENNGFIYAKVFGGFEKIRSSICDLVTISRLLNATLVIPEIQESLRSKGISYKFKSFSYLYNEEQFIASLARDVIIVKSLPENLKAARKRNEFPTFKPKVSTSPNYYIQEVLPKLKRTQVIGLILTDGGCLQSILPPSMSELQRLRCRVAFHALQFRPEIEILGRLMVERLRAWGQPFLAYHPGLVRETLAYHGCAELFQDVHTELIQYRRAQMIRQGIVNEELSVDSHLRRDNGSCPLMPEEVGILLRAMGYPPKTIIYLAGSETFGGHRVLIPLRAMFSNLVDRTSLCSQKEFSDLIGPETSLPQDLFQPPPAKSEKQLKEEWNKAGPRPRPLSPPPDRPIYLHEKEGWYGWITESDTEPSPSAMDLRNQAHRLLWDALDYIVSVEADAFFPGFHNDGSKWPDFASLVMGQRLYESAASRTYRPDRKLLAELFNITRENMYHPKHNWTVSVKEHLNRSLDENGFIRQSLFSKPVSFLSHPLPECSCRTSSATVPNELKGKDGRFLYGGEDECPKWIQRGQEAGSLELAGGKTDESESSDYDELPESDDGDSKNGTTLVFDRDEEWDPND
ccEEcccccccccccccccEEEEEEcccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHcccccEEEccccHHHHHHccccccccccccccccHHHHHHHHHHHHHHccEEEEEEcccccccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccccEEEEcccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcccccccccccHHHHHccccccccHHHHHHHHHHcccccccEEEEEccccccccccHHHHHHHccccccccccccHHHHccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccEEEEccccEEEEcccccccccccHHHHHHHcccccccccccccccHHHHHHHHHHHccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccc
cEEEEccccccccccccccEEEEEEcccHHHHHHHHHHHHHHHHHHHHHEEcccccccccccccccccccHHHHccHHHHHHHHHHHcEHHHcccHHHHHHccccccccccccccccHHHHHHHHHHHHHHccEEEEEcccHHHHcccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccccEEEEEEcccccEEEEccccccccHHHHHHHHHHHHHHccccccccccEEcHHHHHHcccccccHHHHHHHHHHccccccEEEEEEEcccccccHHHHHHHHHccccccccccccHHHHHHccccccccccccEEccccccHHHHHHHHHHccccccccccccccccccccccccEEEEEcccccccccHHHHHHHHHHHHHHHHHHEEEEEccEEEEcccccccccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccccccHHHcccccHHHccccccccccccccccccccccccccEEEccccccHHHHHcccHHcccccccccccccccccccccccccccccccccccccHHcHcccccc
MLLISVsygefapneenngfiyAKVFGGFEKIRSSICDLVTISRLLNATLVIPEIQESLRskgisykfksfsYLYNEEQFIASLARDVIIVKSLPENLKAARkrnefptfkpkvstspnyyiqevlpklkrtQVIGLILtdggclqsilppsmsELQRLRCRVAFHALQFRPEIEILGRLMVERLRAWgqpflayhpglvretlayhgcAELFQDVHTELIQYRRAQMIRQGIVNeelsvdshlrrdngscplmpEEVGILLRamgyppktIIYLAgsetfgghrvlIPLRAMFSNlvdrtslcsqkefsdligpetslpqdlfqpppaksekQLKEEWnkagprprplspppdrpiylhekegwygwitesdtepspsamdLRNQAHRLLWDALDYIVSVeadaffpgfhndgskwpdfaSLVMGQRLYEsaasrtyrpdRKLLAELFNITrenmyhpkhnwTVSVKEHLNrsldengfirqslfskpvsflshplpecscrtssatvpnelkgkdgrflyggedecpkwIQRGQeagslelaggktdesessdydelpesddgdskngttlvfdrdeewdpnd
MLLISVSYgefapneennGFIYAKVFGGFEKIRSSICDLVTISRLLNATLVIPEIQESLRSKGISYKFKSFSYLYNEEQFIASLARDVIIVKSLPEnlkaarkrnefptfkpkvstspnyYIQEVLPKLKRTQVIGLILTDGGCLQSILPPSMSELQRLRCRVAFHALQFRPEIEILGRLMVERLRAWGQPFLAYHPGLVRETLAYHGCAELFQDVHTELIQYRRAQMIRQGIVNEELSVDSHLRRDNGSCPLMPEEVGILLRAMGYPPKTIIYLAGSETFGGHRVLIPLRAMFSNLVDRTSLCSQKEFSDLIGPETSLPQDLFQPPPAKSEKQLKEEwnkagprprplspppdrPIYLHEKEGWYGWITESDTEPSPSAMDLRNQAHRLLWDALDYIVSVEADAFFPGFHNDGSKWPDFASLVMGQRLYEsaasrtyrpdrKLLAELFNITRENMYHPKHNWTVSVKEHLNRSLDENGFIRQSLFSKPVSFLSHPLPECScrtssatvpnelkgKDGRFLYGGEDECPKWIQRGQEAGSlelaggktdesessdydelpesddgdskngttlvfdrdeewdpnd
MLLISVSYGEFAPNEENNGFIYAKVFGGFEKIRSSICDLVTISRLLNATLVIPEIQESLRSKGISYKFKSFSYLYNEEQFIASLARDVIIVKSLPENLKAARKRNEFPTFKPKVSTSPNYYIQEVLPKLKRTQVIGLILTDGGCLQSILPPSMSELQRLRCRVAFHALQFRPEIEILGRLMVERLRAWGQPFLAYHPGLVRETLAYHGCAELFQDVHTELIQYRRAQMIRQGIVNEELSVDSHLRRDNGSCPLMPEEVGILLRAMGYPPKTIIYLAGSETFGGHRVLIPLRAMFSNLVDRTSLCSQKEFSDLIGPETSLPQDLFQPPPAKSEKQLKEEWNKAGprprplspppdrpIYLHEKEGWYGWITESDTEPSPSAMDLRNQAHRLLWDALDYIVSVEADAFFPGFHNDGSKWPDFASLVMGQRLYESAASRTYRPDRKLLAELFNITRENMYHPKHNWTVSVKEHLNRSLDENGFIRQSLFSKPVSFLSHPLPECSCRTSSATVPNELKGKDGRFLYGGEDECPKWIQRGQEAGSLELAGGKTDESESSDYDELPESDDGDSKNGTTLVFDRDEEWDPND
***ISVSYGEFAPNEENNGFIYAKVFGGFEKIRSSICDLVTISRLLNATLVIPEIQESLRSKGISYKFKSFSYLYNEEQFIASLARDVIIVKSLPENL***************VSTSPNYYIQEVLPKLKRTQVIGLILTDGGCLQSILPPSMSELQRLRCRVAFHALQFRPEIEILGRLMVERLRAWGQPFLAYHPGLVRETLAYHGCAELFQDVHTELIQYRRAQMIRQGIVNEELSVDSHLRRDNGSCPLMPEEVGILLRAMGYPPKTIIYLAGSETFGGHRVLIPLRAMFSNLVDRTSLCSQ**************************************************IYLHEKEGWYGWIT***************QAHRLLWDALDYIVSVEADAFFPGFHNDGSKWPDFASLVMGQRLYESAASRTYRPDRKLLAELFNITRENMYHPKHNWTVSVKEHLNRSLDENGFIRQSLFSKPVSFLSHPLPECSC***************GRFLYGGEDECPKWI*****************************************************
*******************FIYAKVFGGFEKIRSSICDLVTISRLLNATLVIPEIQESLRS*G**YKFKSFSYLYNEEQFIASLARDVIIVKSLPENLKAARKRNEFPTFKPKVSTSPNYYIQEVLPKLKRTQVIGLILTDG***********SELQRLRCRVAFHALQFRPEIEILGRLMVERLRAWGQPFLAYHPGLVRETLAYHGCAELFQDVHTELIQYRRAQMIRQGIVN*************GSCPLMPEEVGILLRAMGYPPKTIIYLAGSETFGGHRVLIPLRAMFSNLVDRTSLCSQKEFSDLIGPETSLPQDLFQPPPAKSEKQLKEEWNKAGPRPRPLSPPPDRPIYLHEKEGWYGWI**********************WDALDYIVSVEADAFFPGFHNDGSKWPDFASLVMGQRLYESAASRTYRPDRKLLAELFNITRENMYHPKH*******************************LSHPLPEC*************************************************************************************
MLLISVSYGEFAPNEENNGFIYAKVFGGFEKIRSSICDLVTISRLLNATLVIPEIQESLRSKGISYKFKSFSYLYNEEQFIASLARDVIIVKSLPENLKAARKRNEFPTFKPKVSTSPNYYIQEVLPKLKRTQVIGLILTDGGCLQSILPPSMSELQRLRCRVAFHALQFRPEIEILGRLMVERLRAWGQPFLAYHPGLVRETLAYHGCAELFQDVHTELIQYRRAQMIRQGIVNEELSVDSHLRRDNGSCPLMPEEVGILLRAMGYPPKTIIYLAGSETFGGHRVLIPLRAMFSNLVDRTSLCSQKEFSDLIGPETSLPQDLFQPP*********************LSPPPDRPIYLHEKEGWYGWITESDTEPSPSAMDLRNQAHRLLWDALDYIVSVEADAFFPGFHNDGSKWPDFASLVMGQRLYESAASRTYRPDRKLLAELFNITRENMYHPKHNWTVSVKEHLNRSLDENGFIRQSLFSKPVSFLSHPLPECSCRTSSATVPNELKGKDGRFLYGGEDECPKWIQRGQEAGSL*************************SKNGTTLVFDRDEEWDPND
MLLISVSYGEFAPNEENNGFIYAKVFGGFEKIRSSICDLVTISRLLNATLVIPEIQESLRSKGISYKFKSFSYLYNEEQFIASLARDVIIVKSLPENLKAARKRNEFPTFKPKVSTSPNYYIQEVLPKLKRTQVIGLILTDGGCLQSILPPSMSELQRLRCRVAFHALQFRPEIEILGRLMVERLRAWGQPFLAYHPGLVRETLAYHGCAELFQDVHTELIQYRRAQMIRQGIVNEELSVDSHLRRDNGSCPLMPEEVGILLRAMGYPPKTIIYLAGSETFGGHRVLIPLRAMFSNLVDRTSLCSQKEFSDLIGPETSLPQDLFQPPPAKSEKQLKEEWNKAGPRPRPLSPPPDRPIYLHEKEGWYGWITESDTEPSPSAMDLRNQAHRLLWDALDYIVSVEADAFFPGFHNDGSKWPDFASLVMGQRLYESAASRTYRPDRKLLAELFNITRENMYHPKHNWTVSVKEHLNRSLDENGFIRQSLFSKPVSFLSHPLPECSCRTSSATVPNELKGKDGRFLYGGEDECPKWIQR***************************************************
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MLLISVSYGEFAPNEENNGFIYAKVFGGFEKIRSSICDLVTISRLLNATLVIPEIQESLRSKGISYKFKSFSYLYNEEQFIASLARDVIIVKSLPENLKAARKRNEFPTFKPKVSTSPNYYIQEVLPKLKRTQVIGLILTDGGCLQSILPPSMSELQRLRCRVAFHALQFRPEIEILGRLMVERLRAWGQPFLAYHPGLVRETLAYHGCAELFQDVHTELIQYRRAQMIRQGIVNEELSVDSHLRRDNGSCPLMPEEVGILLRAMGYPPKTIIYLAGSETFGGHRVLIPLRAMFSNLVDRTSLCSQKEFSDLIGPETSLPQDLFQPPPAKSEKQLKEEWNKAGPRPRPLSPPPDRPIYLHEKEGWYGWITESDTEPSPSAMDLRNQAHRLLWDALDYIVSVEADAFFPGFHNDGSKWPDFASLVMGQRLYESAASRTYRPDRKLLAELFNITRENMYHPKHNWTVSVKEHLNRSLDENGFIRQSLFSKPVSFLSHPLPECSCRTSSATVPNELKGKDGRFLYGGEDECPKWIQRGQEAGSLELAGGKTDESESSDYDELPESDDGDSKNGTTLVFDRDEEWDPND
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query585 2.2.26 [Sep-21-2011]
Q8W486519 Uncharacterized protein A no no 0.511 0.576 0.330 2e-39
>sp|Q8W486|Y1491_ARATH Uncharacterized protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=1 SV=1 Back     alignment and function desciption
 Score =  164 bits (414), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/324 (33%), Positives = 166/324 (51%), Gaps = 25/324 (7%)

Query: 13  PNEENNGFIYAKVFGGFEKIRSSICDLVTISRLLNATLVIPEIQESLRSKGISYKFKSFS 72
           P +E NG++  +  GG  + RS+IC+ V  +R++NATLV+PE    L +    +    F 
Sbjct: 84  PTKETNGYLRVRCNGGLNQQRSAICNAVLAARIMNATLVLPE----LDANSFWHDDSGFQ 139

Query: 73  YLYNEEQFIASLARDVIIVKSLPENLKAAR-KRNEFPTFKPKVSTSPNYYIQEVLPKLKR 131
            +Y+ E FI +L  DV IV  +P+  K  + K+ +    +P       +Y+   L  ++ 
Sbjct: 140 GIYDVEHFIETLKYDVKIVGKIPDVHKNGKTKKIKAFQIRPPRDAPIEWYLTTALKAMRE 199

Query: 132 TQVIGLILTDGGCLQSILPPSMSELQRLRCRVAFHALQFRPEIEILGRLMVERLRAWGQP 191
              I L        + I  P   E QRLRCRV +HAL+F+P I  L   +V++LR+ G  
Sbjct: 200 HSAIYLTPFSHRLAEEIDNP---EYQRLRCRVNYHALRFKPHIMKLSESIVDKLRSQGH- 255

Query: 192 FLAYHPGLVRETLAYHGCAELFQDVHTELI-QYRRAQMIRQGIVNEELSVDSHLRRDNGS 250
           F++ H     + LA+ GC ++F     +++ +YR+     + ++  E       RR  G 
Sbjct: 256 FMSIHLRFEMDMLAFAGCFDIFNPEEQKILRKYRKENFADKRLIYNE-------RRAIGK 308

Query: 251 CPLMPEEVGILLRAMGYPPKTIIYLAGSETFGGHRVLIPLRAMFSNLVDRTSLCSQKEFS 310
           CPL PEEVG++LRAM +   T IYLA  E FGG + + P R +F  L + +S+   +E S
Sbjct: 309 CPLTPEEVGLILRAMRFDNSTRIYLAAGELFGGEQFMKPFRTLFPRLDNHSSVDPSEELS 368

Query: 311 ----DLIGPE----TSLPQDLFQP 326
                LIG        L  D+F P
Sbjct: 369 ATSQGLIGSAVDYMVCLLSDIFMP 392





Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query585
298204800663 unnamed protein product [Vitis vinifera] 0.981 0.865 0.765 0.0
356507556663 PREDICTED: DUF246 domain-containing prot 0.981 0.865 0.727 0.0
30678946656 O-fucosyltransferase-like protein [Arabi 0.970 0.865 0.734 0.0
6006861638 putative auxin-independent growth promot 0.970 0.890 0.734 0.0
110736066656 putative auxin-independent growth promot 0.970 0.865 0.732 0.0
297833060656 hypothetical protein ARALYDRAFT_477634 [ 0.970 0.865 0.730 0.0
224144817652 predicted protein [Populus trichocarpa] 0.952 0.854 0.722 0.0
449446891658 PREDICTED: DUF246 domain-containing prot 0.977 0.869 0.705 0.0
356516146663 PREDICTED: DUF246 domain-containing prot 0.981 0.865 0.721 0.0
357436351669 DUF246 domain-containing protein [Medica 0.981 0.857 0.694 0.0
>gi|298204800|emb|CBI25298.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  898 bits (2321), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 445/581 (76%), Positives = 497/581 (85%), Gaps = 7/581 (1%)

Query: 12  APNEENNGFIYAKVFGGFEKIRSSICDLVTISRLLNATLVIPEIQESLRSKGISYKFKSF 71
            PNE+NNGFIYAK+ GGFEKIR  ICDLV ISRLLNATLVIPEIQ+S RSKGISYKF+SF
Sbjct: 83  VPNEKNNGFIYAKISGGFEKIRPLICDLVAISRLLNATLVIPEIQQSTRSKGISYKFRSF 142

Query: 72  SYLYNEEQFIASLARDVIIVKSLPENLKAARKRNEFPTFKPKVSTSPNYYIQEVLPKLKR 131
           SYLYNEEQFIASL  DVIIVKSLPE LK+ R+ NEFPTF+PK S+SP++YI+E+LP LK+
Sbjct: 143 SYLYNEEQFIASLKNDVIIVKSLPEKLKSGRRNNEFPTFRPKSSSSPSFYIKEILPNLKK 202

Query: 132 TQVIGLILTDGGCLQSILPPSMSELQRLRCRVAFHALQFRPEIEILGRLMVERLRAWGQP 191
            +VIGLILTDGGCLQSILPPSMSE QRLRCRVAF AL FRPEI++LGR MVERLR WGQP
Sbjct: 203 FKVIGLILTDGGCLQSILPPSMSEYQRLRCRVAFQALHFRPEIQVLGRRMVERLRDWGQP 262

Query: 192 FLAYHPGLVRETLAYHGCAELFQDVHTELIQYRRAQMIRQGIVNEELSVDSHLRRDNGSC 251
           FLA+HPGLVR+ LAYHGCAELFQDVHTELIQYRRAQ+I+QGIV EELSVDSHL ++ G C
Sbjct: 263 FLAFHPGLVRDALAYHGCAELFQDVHTELIQYRRAQLIKQGIVKEELSVDSHLHKEKGLC 322

Query: 252 PLMPEEVGILLRAMGYPPKTIIYLAGSETFGGHRVLIPLRAMFSNLVDRTSLCSQKEFSD 311
           PLMPEEVGILLRAMGYPPKTIIYLAGSETFGG RVLIPLRAMF+NLVDRTSLCS +E  D
Sbjct: 323 PLMPEEVGILLRAMGYPPKTIIYLAGSETFGGQRVLIPLRAMFANLVDRTSLCSSQELLD 382

Query: 312 LIGPETSLPQDLFQPPPAKSEKQLKEEWNKAGPRPRPLSPPPDRPIYLHEKEGWYGWITE 371
           L+GPET L  D F+ PPAK+E+QLKEEW KAGPRPRPL PPPDRPIY HEKEGWY WITE
Sbjct: 383 LVGPETPLSLDTFKFPPAKTEEQLKEEWKKAGPRPRPLPPPPDRPIYRHEKEGWYDWITE 442

Query: 372 SDTEPSPSAMDLRNQAHRLLWDALDYIVSVEADAFFPGFHNDGSKWPDFASLVMGQRLYE 431
           ++TEP PS MDLR +AHRLLWDALDYIVSVEADAFFPGF+NDG  WPDF+SLVMGQRLYE
Sbjct: 443 TETEPDPSPMDLRMEAHRLLWDALDYIVSVEADAFFPGFNNDGIGWPDFSSLVMGQRLYE 502

Query: 432 SAASRTYRPDRKLLAELFNITRENMYHPKHNWTVSVKEHLNRSLDENGFIRQSLFSKPVS 491
           + +SRTYRPDRK+LA+LFNITRENMYHPKHNWT+SV+E LN+S+ E G IR+SL SKP S
Sbjct: 503 NPSSRTYRPDRKILADLFNITRENMYHPKHNWTLSVQELLNKSMGEEGLIRESLLSKPNS 562

Query: 492 FLSHPLPECSCRTSSATVPNELKGKDGRFLYGGEDECPKWIQRGQEAGSLELAG---GKT 548
           FLSHPLPECSCR  S  +PN++KG DGR LYGGED CP+W+QRG E   ++       K 
Sbjct: 563 FLSHPLPECSCRIPSDEIPNQVKGNDGRLLYGGEDNCPEWMQRGMEMVKVDPGATERSKA 622

Query: 549 DESESSDY----DELPESDDGDSKNGTTLVFDRDEEWDPND 585
           DE E  DY    DE PE+DD      TTL FD+D+E DPND
Sbjct: 623 DEVELPDYETDLDEQPENDDTSGNTNTTLPFDQDDEMDPND 663




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356507556|ref|XP_003522530.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine max] Back     alignment and taxonomy information
>gi|30678946|ref|NP_187031.2| O-fucosyltransferase-like protein [Arabidopsis thaliana] gi|332640475|gb|AEE73996.1| O-fucosyltransferase-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|6006861|gb|AAF00637.1|AC009540_14 putative auxin-independent growth promoter protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|110736066|dbj|BAF00006.1| putative auxin-independent growth promoter protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297833060|ref|XP_002884412.1| hypothetical protein ARALYDRAFT_477634 [Arabidopsis lyrata subsp. lyrata] gi|297330252|gb|EFH60671.1| hypothetical protein ARALYDRAFT_477634 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|224144817|ref|XP_002325426.1| predicted protein [Populus trichocarpa] gi|222862301|gb|EEE99807.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449446891|ref|XP_004141204.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis sativus] gi|449489598|ref|XP_004158360.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356516146|ref|XP_003526757.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine max] Back     alignment and taxonomy information
>gi|357436351|ref|XP_003588451.1| DUF246 domain-containing protein [Medicago truncatula] gi|355477499|gb|AES58702.1| DUF246 domain-containing protein [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query585
TAIR|locus:2079404656 EDA30 "embryo sac development 0.970 0.865 0.715 7.2e-226
TAIR|locus:2102886677 AT3G30300 [Arabidopsis thalian 0.923 0.797 0.513 3.4e-141
TAIR|locus:2174754522 AT5G64600 [Arabidopsis thalian 0.487 0.545 0.346 1.3e-49
TAIR|locus:2010657519 AT1G04910 [Arabidopsis thalian 0.511 0.576 0.327 3.3e-49
TAIR|locus:2009467565 AT1G22460 [Arabidopsis thalian 0.490 0.507 0.324 3.3e-47
TAIR|locus:2130938549 AT4G16650 [Arabidopsis thalian 0.490 0.522 0.345 4.2e-47
TAIR|locus:2076552512 AT3G02250 [Arabidopsis thalian 0.482 0.550 0.354 1.6e-45
TAIR|locus:2143181508 AT5G15740 [Arabidopsis thalian 0.471 0.543 0.365 5.3e-45
TAIR|locus:2080285638 AT3G54100 [Arabidopsis thalian 0.468 0.429 0.347 7.5e-45
TAIR|locus:2014869499 AT1G14020 [Arabidopsis thalian 0.473 0.555 0.356 3.2e-43
TAIR|locus:2079404 EDA30 "embryo sac development arrest 30" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2180 (772.5 bits), Expect = 7.2e-226, P = 7.2e-226
 Identities = 414/579 (71%), Positives = 477/579 (82%)

Query:    12 APNEENNGFIYAKVFGGFEKIRSSICDLVTISRLLNATLVIPEIQESLRSKGISYKFKSF 71
             AP+ +NNGFIYAK+FGGF+KIRSSICDLVTISRLLNATLVIPE+QESLRSKGIS KFKSF
Sbjct:    84 APSSKNNGFIYAKIFGGFDKIRSSICDLVTISRLLNATLVIPELQESLRSKGISNKFKSF 143

Query:    72 SYLYNEEQFIASLARDVIIVKSLPENLKAARKRNEFPTFKPKVSTSPNYYIQEVLPKLKR 131
             SYLY+EEQFIA L  DVI++K+LPE+LKAARKRNEFP FKPK S SP +Y+++VLPKLK+
Sbjct:   144 SYLYDEEQFIAFLKNDVIVMKTLPESLKAARKRNEFPLFKPKNSASPKFYLEDVLPKLKK 203

Query:   132 TQVIGLILTDGGCLQSILPPSMSELQRLRCRVAFHALQFRPEIEILGRLMVERLRAWGQP 191
               VIGLI++DGGCLQS LP SM ELQRLRCRVAFHALQ RPEI++L + MV+RLR  GQP
Sbjct:   204 ANVIGLIVSDGGCLQSALPASMPELQRLRCRVAFHALQLRPEIQVLAKEMVDRLRKSGQP 263

Query:   192 FLAYHPGLVRETLAYHGCAELFQDVHTELIQYRRAQMIRQGIVNEELSVDSHLRRDNGSC 251
             FLAYHPGLVRE LAYHGCAELFQD+H+ELIQYRRAQMI+Q  + EEL VDS LRRDNG C
Sbjct:   264 FLAYHPGLVREKLAYHGCAELFQDIHSELIQYRRAQMIKQRFILEELIVDSRLRRDNGLC 323

Query:   252 PLMPEEVGILLRAMGYPPKTIIYLAGSETFGGHRVLIPLRAMFSNLVDRTSLCSQKEFSD 311
             PLMPEEVGILL+A+GY  K IIYLAGSE FGG RVLIPLRAMF NLVDRTSLCS +E S+
Sbjct:   324 PLMPEEVGILLKALGYSQKAIIYLAGSEIFGGQRVLIPLRAMFPNLVDRTSLCSTEELSE 383

Query:   312 LIGPETSLPQDLFQPPPAKSEKQLKEEWNKAGXXXXXXXXXXXXXIYLHEKEGWYGWITE 371
             L+GPET LP++ ++ PP KS+KQLKEEWNKAG             IY HEKEGWYGW+TE
Sbjct:   384 LVGPETPLPENTYKMPPRKSDKQLKEEWNKAGPRPRPLPPPPDRPIYQHEKEGWYGWLTE 443

Query:   372 SDTEPSPSAMDLRNQAHRLLWDALDYIVSVEADAFFPGFHNDGSKWPDFASLVMGQRLYE 431
             +DTEPSPS MDLRNQAHRLLWDALD+ VSVEAD FFPGF+NDGS WPDF+SLVMGQRLYE
Sbjct:   444 NDTEPSPSPMDLRNQAHRLLWDALDFAVSVEADVFFPGFNNDGSGWPDFSSLVMGQRLYE 503

Query:   432 SAASRTYRPDRKLLAELFNITRENMYHPKHNWTVSVKEHLNRSLDENGFIRQSLFSKPVS 491
               +SRTYR DRK++ ELFNITRE+MYHP  NWT+ V++HLN SL E+G IRQS+ SKP S
Sbjct:   504 RPSSRTYRLDRKVIQELFNITREDMYHPNRNWTLRVRKHLNSSLGESGLIRQSMLSKPRS 563

Query:   492 FLSHPLPECSCRTSSATVPNELKGKDGRFLYGGEDECPKWIQRGQEAGSLELAGGKTDES 551
             FLSHPLPECSCRTS+     +++  DGRFLYGGEDECPKWI+    AG   +   KTD+ 
Sbjct:   564 FLSHPLPECSCRTSALEDSRQIQSDDGRFLYGGEDECPKWIK---SAG---VEKSKTDDG 617

Query:   552 ESSDYD-----ELPESDDGDSKNGTTLVFDRDEEWDPND 585
             +  DYD     E  E+++  +K+     FD+DEEWDPND
Sbjct:   618 DQPDYDHDLLAEQSETEEEFAKSKVASAFDQDEEWDPND 656




GO:0005794 "Golgi apparatus" evidence=ISM;IDA
GO:0010197 "polar nucleus fusion" evidence=IMP
GO:0009507 "chloroplast" evidence=IDA
GO:0048868 "pollen tube development" evidence=IMP
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM
TAIR|locus:2102886 AT3G30300 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2174754 AT5G64600 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2010657 AT1G04910 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2009467 AT1G22460 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2130938 AT4G16650 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2076552 AT3G02250 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2143181 AT5G15740 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080285 AT3G54100 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2014869 AT1G14020 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00025295001
SubName- Full=Chromosome chr9 scaffold_33, whole genome shotgun sequence; (656 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query585
cd11299290 cd11299, O-FucT_plant, GDP-fucose protein O-fucosy 1e-96
pfam10250315 pfam10250, O-FucT, GDP-fucose protein O-fucosyltra 2e-84
cd11299290 cd11299, O-FucT_plant, GDP-fucose protein O-fucosy 4e-08
>gnl|CDD|211385 cd11299, O-FucT_plant, GDP-fucose protein O-fucosyltransferase, plant specific subfamily Back     alignment and domain information
 Score =  296 bits (759), Expect = 1e-96
 Identities = 114/291 (39%), Positives = 154/291 (52%), Gaps = 48/291 (16%)

Query: 20  FIYAKVFGGFEKIRSSICDLVTISRLLNATLVIPEIQESLRSKGISYKFKSFSYLYNEEQ 79
           ++     GG  + RS ICD V ++RLLNATLV+PE+        +      F  +Y+ + 
Sbjct: 1   YLLVSANGGLNQQRSQICDAVAVARLLNATLVLPELD----KNSVWGDSSKFGDIYDVDH 56

Query: 80  FIASLARDVIIVKSLPENLKAARKRNEFPTFKPKVSTSPNYYIQEVLPKLKRTQVIGLIL 139
           FI SL  DV +VK LPE L + +   E    +    +SP+YY++EVLP LK+  VI  + 
Sbjct: 57  FIKSLKDDVRVVKKLPEELASKKP--EITVKRVPSRSSPSYYLEEVLPLLKKHGVI-RLA 113

Query: 140 TDGGCLQSILPPSMSELQRLRCRVAFHALQFRPEIEILGRLMVERLRAWGQPFLAYHPGL 199
                L + L P   E+QRLRCRV FHAL+F PEIE LG  +V+RLR  G PFLA H   
Sbjct: 114 PFDSRLANDLLPP--EIQRLRCRVNFHALRFVPEIEELGDKLVDRLREAGGPFLALHLRF 171

Query: 200 VRETLAYHGCAELFQDVHTELIQYRRAQMIRQGIVNEELSVDSHLRRDNGSCPLMPEEVG 259
            ++ LA+ GC                                       G CPL PEEVG
Sbjct: 172 EKDMLAFSGC---------------------------------------GKCPLTPEEVG 192

Query: 260 ILLRAMGYPPKTIIYLAGSETFGGHRVLIPLRAMFSNLVDRTSLCSQKEFS 310
           +LLRA+G+P  T IYLA  E +GG R L PLR++F NL  + +L + +E +
Sbjct: 193 LLLRALGFPRSTRIYLAAGEIYGGERRLDPLRSIFPNLYTKETLATAEELA 243


Some members of this plant-specific family of O-fucosyltransferases have been annotated as auxin-independent growth promotors. The function of the protein seems unclear. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. Length = 290

>gnl|CDD|220652 pfam10250, O-FucT, GDP-fucose protein O-fucosyltransferase Back     alignment and domain information
>gnl|CDD|211385 cd11299, O-FucT_plant, GDP-fucose protein O-fucosyltransferase, plant specific subfamily Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 585
PF10250351 O-FucT: GDP-fucose protein O-fucosyltransferase; I 100.0
KOG3849386 consensus GDP-fucose protein O-fucosyltransferase 95.77
PF05830321 NodZ: Nodulation protein Z (NodZ); InterPro: IPR00 84.14
>PF10250 O-FucT: GDP-fucose protein O-fucosyltransferase; InterPro: IPR019378 This is a family of conserved proteins representing the enzyme responsible for adding O-fucose to EGF (epidermal growth factor-like) repeats Back     alignment and domain information
Probab=100.00  E-value=1.6e-52  Score=424.12  Aligned_cols=304  Identities=29%  Similarity=0.454  Sum_probs=203.3

Q ss_pred             EcCChhhHHHHHHHHHHHHHHhcceEeeccccccccccCCCC--CCCCCCccccHHHHHHHccccceeeccCchhHHhhc
Q 007920           25 VFGGFEKIRSSICDLVTISRLLNATLVIPEIQESLRSKGISY--KFKSFSYLYNEEQFIASLARDVIIVKSLPENLKAAR  102 (585)
Q Consensus        25 anGGLNQqR~~IcDaVaVARiLNATLVIP~Ld~~s~~~~d~s--d~s~F~DIFD~dhFI~sL~~DVrIVk~LP~~l~~~~  102 (585)
                      +.||+||||.+|++||++|++||+|||||.+..... |++.+  ..-.|+++||++||++.++.+|.+++.+|..+....
T Consensus         6 ~~GGfnNQr~~~~~a~~~A~~LnRTLVLPp~~~~~~-~~~~~~~~~ipf~~~fD~~~l~~~~~~vi~~~ef~~~~~~~~~   84 (351)
T PF10250_consen    6 CMGGFNNQRMGFENAVVFAKALNRTLVLPPFIKHYH-WKDQSKQRHIPFSDFFDVEHLRKFLRPVITMEEFLPKHWDEVF   84 (351)
T ss_dssp             -SSSHHHHHHHHHHHHHHHHHHT-EEE--EEEEESS-SS----EEEEEHHHHB-HHHHTTTS--EE-HHHHHHHHS-GGG
T ss_pred             CCCCHHHHHHHHHHHHHHHHHhCCEEEcCCcccccc-ccccccccccChhhhccHHHHHHHhhCceehheeccchhcccc
Confidence            789999999999999999999999999999999874 44432  122499999999999999999999999987776542


Q ss_pred             cc---------------------------CCCCccCCCC-CCChhHHHHhhhhhhhcc------ceEEEeecCCcccccC
Q 007920          103 KR---------------------------NEFPTFKPKV-STSPNYYIQEVLPKLKRT------QVIGLILTDGGCLQSI  148 (585)
Q Consensus       103 ~~---------------------------~~i~~~~vp~-~ss~~yY~~~VlP~L~k~------~VI~l~~~d~rla~~~  148 (585)
                      ..                           .....+.... ++.+.+|+++++|++.++      +|+.|..+...+..+.
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  164 (351)
T PF10250_consen   85 RLQYCWSPWESGSWDDNMKDGNPFGPFWDKFPIKFDPCEFWSSPSLYLEDVLPELREWNENSEHPVIAFTGFESRLPDNY  164 (351)
T ss_dssp             -EEEESS-B--------TTSSTTHHHHHHHTT---SEEE-E-TTSTTTT-STTHHHHHHHHTT-SEEEESS-SS-SS--G
T ss_pred             chhhcccccccccchhhccccccccccccccceeeccccccCCchhhHHHhhhHHhhhccccccccceeccccccchhcc
Confidence            21                           1112233333 678889999999999987      9999999988877765


Q ss_pred             CCCChhHHhhhhhhccccccccchHHHHHHHHHHHHHHhcCCCeEEeccchhhhhhhhhccccccchhHHHHHHHHHHHh
Q 007920          149 LPPSMSELQRLRCRVAFHALQFRPEIEILGRLMVERLRAWGQPFLAYHPGLVRETLAYHGCAELFQDVHTELIQYRRAQM  228 (585)
Q Consensus       149 LP~~~~eiQrLRCrvnf~ALrF~p~Ie~LG~~LV~RLR~~g~pyIALHLRfEkDMLAfSgC~~~~~~~~~el~~~rr~~~  228 (585)
                      +++   ++||        +|+|+++|+++|+++|++|+..+++|||+|||+|+||  +++|.+..   ...+++.-|.+ 
T Consensus       165 ~~~---~~~r--------~l~~~~~i~~~a~~~i~~~~~~~~~yiavHlR~~~D~--~~~C~~~~---~~~~~~~~~~~-  227 (351)
T PF10250_consen  165 LDR---DLQR--------YLRFSPEIRELADKFIKRLLAGGGPYIAVHLRRGKDW--FSACEFKG---ERHLLASPRCW-  227 (351)
T ss_dssp             GGG---GGGG--------G--B-HHHHHHHHHHHHHH----SSEEEEEE--SHHH--HHHHCT-T-------TTTHHHH-
T ss_pred             cCc---cceE--------EEecCHHHHHHHHHHHHHhhcccCceEEEeecccCch--HhhcccCC---chHHHHHhHhh-
Confidence            553   6777        9999999999999999999965679999999999999  99999743   44444443332 


Q ss_pred             hhccccccccccCchhhccCCCCCCCHHHHHHHHHhcCCCCCceEEEecccccCCccchhhHHHhccCccccccCCChhh
Q 007920          229 IRQGIVNEELSVDSHLRRDNGSCPLMPEEVGILLRAMGYPPKTIIYLAGSETFGGHRVLIPLRAMFSNLVDRTSLCSQKE  308 (585)
Q Consensus       229 ~k~~~~k~~~~i~~~~~R~~G~CPLTPeEVgl~LrALGf~~~T~IYlAaGeIyGG~~~m~pL~~~FPnl~~k~tLat~~E  308 (585)
                             ++..+.+...+..|.||++|++++.+++++|+.+.|.||||++++|||.+.|.+|+++||++++|++|.+.+|
T Consensus       228 -------~~~~~~~~~~~~~~~~p~~~~~~~~i~~~~~~~~~~~vYiAtd~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~  300 (351)
T PF10250_consen  228 -------GKKSINPEKKRRNGCCPSTPQEAKQILRALGKNNTTVVYIATDEIYGGERRLDPLKNMFPNVVTKDDLLSHEE  300 (351)
T ss_dssp             --------GGGTT-----HHHHS--HHHHHHHHHHHHHHHT-SEEEEEESS-----------HHHHHHHHGGGT--EE--
T ss_pred             -------ccccccchhhhhcCCCCChHHHHHHHHHHhccCCCCEEEEecCcccccchhHHHHHHHhhhhEeccccCCHHH
Confidence                   2335667788889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hccccCCCCCCCCCCCCCCCcchhHHHHHHHhhcCCCCCCCCCCCCCccccccccccccccccCCCCCCCchhhhhhhhh
Q 007920          309 FSDLIGPETSLPQDLFQPPPAKSEKQLKEEWNKAGPRPRPLSPPPDRPIYLHEKEGWYGWITESDTEPSPSAMDLRNQAH  388 (585)
Q Consensus       309 L~~f~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~rp~~~~~p~~rp~y~~~~e~~~~~~~~~~~e~~~s~~~~r~~~h  388 (585)
                      +++|.+                                                                          
T Consensus       301 ~~~~~~--------------------------------------------------------------------------  306 (351)
T PF10250_consen  301 LEPLND--------------------------------------------------------------------------  306 (351)
T ss_dssp             S-------------------------------------------------------------------------------
T ss_pred             hhhccc--------------------------------------------------------------------------
Confidence            999863                                                                          


Q ss_pred             hhhhhhhheeeeeccceeccccCCCCCCcCchHHhhhhccccccCC
Q 007920          389 RLLWDALDYIVSVEADAFFPGFHNDGSKWPDFASLVMGQRLYESAA  434 (585)
Q Consensus       389 ~l~~AALDYiV~l~SDvFvpt~~~~G~g~~Nma~~v~GhR~Y~g~~  434 (585)
                       .++|+|||+||+.||+||.+.   ||   .|+..|+++|.|.|..
T Consensus       307 -~~~a~vD~~i~~~s~~Figt~---~S---tfs~~i~~~R~~~g~~  345 (351)
T PF10250_consen  307 -DQLAMVDQEICSRSDVFIGTC---GS---TFSSNIARERHYRGKP  345 (351)
T ss_dssp             -S--HHHHHHHHHHSSEEEE-T---T----HHHHHHHHHHHHSSSS
T ss_pred             -cchhHHHHHHHhcCCEEEecC---cc---hhHHHhhcccCcCCCC
Confidence             235999999999999999874   43   8999999999999974



Six highly conserved cysteines are present as well as a DXD-like motif (ERD), conserved in mammals, Drosophila, and Caenorhabditis elegans. Both features are characteristic of several glycosyltransferase families. The enzyme is a membrane-bound protein released by proteolysis and, as for most glycosyltransferases, is strongly activated by manganese []. ; PDB: 3ZY6_A 3ZY3_A 3ZY5_A 3ZY2_A 3ZY4_A.

>KOG3849 consensus GDP-fucose protein O-fucosyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF05830 NodZ: Nodulation protein Z (NodZ); InterPro: IPR008716 The nodulation genes of Rhizobia are regulated by the nodD gene product in response to host-produced flavonoids and appear to encode enzymes involved in the production of a lipo-chitose signal molecule required for infection and nodule formation Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query585
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-05
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 52.5 bits (125), Expect = 3e-07
 Identities = 84/538 (15%), Positives = 148/538 (27%), Gaps = 181/538 (33%)

Query: 38  DLVTISRLLNATLVIPEIQESLRSKG--ISYKF--KSFSYLYNEEQFIASLARDVIIVKS 93
            ++     ++ TL +      L SK   +  KF  +     Y    F+ S  +      S
Sbjct: 53  HIIMSKDAVSGTLRLFWT---LLSKQEEMVQKFVEEVLRINYK---FLMSPIKTEQRQPS 106

Query: 94  LPENL-KAARKR--NEFPTFKPKVSTSPNYY--IQEVLPKLKRTQVIGLILTDG--GCLQ 146
           +   +    R R  N+   F     +    Y  +++ L +L+  + + +   DG  G  +
Sbjct: 107 MMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLI---DGVLGSGK 163

Query: 147 SILPPSMSELQRLRCRVAFH------ALQFRPE--IEILGRLMVERLRAWGQPFLAYHPG 198
           + +   +    +++C++ F            PE  +E+L +L                  
Sbjct: 164 TWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKL------------------ 205

Query: 199 LVRETLAYHGCAELFQDVHTELIQYRRAQMIRQGIVNEELSVDSHLRRDNGSCPLMPEEV 258
                       ++  +  +       +  I+  I     S+ + LRR            
Sbjct: 206 ----------LYQIDPNWTSRS---DHSSNIKLRIH----SIQAELRR------------ 236

Query: 259 GILLRAMGYP-----------PKTIIYLAGSETFGGH-RVLIPLRAMFSNLVD-----RT 301
             LL++  Y             K          F    ++L+  R  F  + D      T
Sbjct: 237 --LLKSKPYENCLLVLLNVQNAKAW------NAFNLSCKILLTTR--FKQVTDFLSAATT 286

Query: 302 SLCSQKEFSDLIGPETSLPQDLFQPPPAK----SEKQLKEEWNKAGPR-----PRPLSPP 352
           +  S    S  + P+      L      K      + L  E     PR        +   
Sbjct: 287 THISLDHHSMTLTPDEVK--SLL----LKYLDCRPQDLPREVLTTNPRRLSIIAESIRDG 340

Query: 353 PDRPIYLHEKEGWYGW----------ITESDTEP-SPSAMDLRNQAHRL----------- 390
                       W  W          I ES      P+  + R    RL           
Sbjct: 341 LAT---------WDNWKHVNCDKLTTIIESSLNVLEPA--EYRKMFDRLSVFPPSAHIPT 389

Query: 391 -----LWDALDYIVSVEADAFFPGFHNDGSKWPDFASLVMGQRLYESAASRTYR-PDRKL 444
                +W  +      +        H          SLV  Q         T   P   L
Sbjct: 390 ILLSLIWFDVIKS---DVMVVVNKLHK--------YSLVEKQP-----KESTISIPSIYL 433

Query: 445 LAELFNITRENMYHPKHNWTVSVKEHLN--RSLDENGFIRQSLFSKPVSFLSHPLPEC 500
                 +  EN Y   H    S+ +H N  ++ D +  I   L     S + H L   
Sbjct: 434 ---ELKVKLENEYA-LHR---SIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNI 484


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query585
4ap5_A408 GDP-fucose protein O-fucosyltransferase 2; GT-B, G 99.21
3zy2_A362 Putative GDP-fucose protein O-fucosyltransferase; 98.42
2de0_X526 Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran 94.47
>4ap5_A GDP-fucose protein O-fucosyltransferase 2; GT-B, GT68; HET: NAG; 3.00A {Homo sapiens} PDB: 4ap6_A* Back     alignment and structure
Probab=99.21  E-value=1.3e-10  Score=121.19  Aligned_cols=73  Identities=14%  Similarity=0.233  Sum_probs=52.3

Q ss_pred             CCCCceEEEEEc-C-ChhhHHHHHHHHHHHHHHhcce----EeeccccccccccCCC--CCCCCCCccccHHHHHHHccc
Q 007920           15 EENNGFIYAKVF-G-GFEKIRSSICDLVTISRLLNAT----LVIPEIQESLRSKGIS--YKFKSFSYLYNEEQFIASLAR   86 (585)
Q Consensus        15 ~~snGYL~V~an-G-GLNQqR~~IcDaVaVARiLNAT----LVIP~Ld~~s~~~~d~--sd~s~F~DIFD~dhFI~sL~~   86 (585)
                      ...++||+-..| | |+|.||...-.|.++|+.||.|    ||||-...-.-|....  +..-.|++.||++++    +.
T Consensus        19 ~~~~rYl~y~~~~g~Gfn~qrd~f~~~a~~a~~Lnrt~~~~LVLPPw~~~~h~~~~~~~~~~ipf~~fFDv~~L----~~   94 (408)
T 4ap5_A           19 ASRRRYLLYDVNPPEGFNLRRDVYIRIASLLKTLLKTEEWVLVLPPWGRLYHWQSPDIHQVRIPWSEFFDLPSL----NK   94 (408)
T ss_dssp             -CCCEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHTTSCEEEEECCBCCSCGGGSTTSCCCSBCGGGTBCHHHH----HT
T ss_pred             ccccceEEecCCCCCcccHHHHHHHHHHHHHHHHhCcCCcEEEeCCCcccccccCCcccceeccHHHhcCHHHH----Hh
Confidence            467899998664 4 8999999999999999999999    9999664211022221  112359999999864    44


Q ss_pred             cceee
Q 007920           87 DVIIV   91 (585)
Q Consensus        87 DVrIV   91 (585)
                      .|+||
T Consensus        95 ~vpVI   99 (408)
T 4ap5_A           95 NIPVI   99 (408)
T ss_dssp             TSCEE
T ss_pred             hCCee
Confidence            55555



>3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A* Back     alignment and structure
>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00