Citrus Sinensis ID: 007926

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580----
MRKWTIPSILLLLFLVALIPDQGRNIQAKAEDESDKLVDPPKVEEKLGAVPNGLSTDSDVAKREAESISKRSLRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIRLHLRDEAGEYLEESKLKELVKKYSEFINFPIYIWASKEVDVDVPTDEDDSSDEEEKAEKEEETEKSESESEDEDEDSEKKPKTKTVKETTFEWELLNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTNKANLKLYVRRVFISDEFDELLPKYLNFLKGLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKALDMIRKIAEEDPDESTGKDKKDVEKFSDDDDKKGQYTKFWNEFGKSIKLGIIEDAANRNRLAKLLRFERYLFYSLNLSYEYFYFSRISLPFVSASFSHGVCTLL
ccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccEEEEHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEEEEcccccEEEEEEccccccHHHHHHccccEEcccHHHHHHHHHccccccccccccccccEEEEEccEEEEEEEcccccEEEEEEcccccEEEEEcccccccccccEEEEEEcccccccccHHHHHHHHHHHcccccccEEEEEEcccccccccccccccHHHHHHHHHHHccccccccccccccccccccccccEEEccccEEccccccccccccccccHHHHHHHHHHHccccccccccEEEEEEEcccEEEEEEEEEccccccccHHHcccccccccEEEEccEEEEcccccccHHHHHccccccccccccccccHHHHHHccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHcccccccccccccHHHHHHHHccHHHHHHHHHccccccc
ccccHHHHHHHHHHHHHHccccccEEEEccccccccccccccHHcccccccccccccHHHHHHccHHHcccccccccEEEEccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHcccccccccEEEEEEHHHcEEEEEEccccccHHHHHHHHHcccHHHHHHHHHHHHccccHHHHHHHccHHHHHHHcEEEEEEEEEccccccEEEEEccccEEEEEEcccccccccEEEEEEEEccccHHHHcHHHHHHHHHHHcccccccEEEEEEEEccccccccHHHHHHHHHcccccccccccccccHHHHHHHccccccEEEEEEEEcHHHHHccccEEccccHHccHHHHHHHHHHHHccHHcccccEEEEEEEcccEEEEEEEEccccccccccccccccccccEEEEEEEEEEEccHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccccccccccHHHHHHHcccccccEEEEEcccccc
MRKWTIPSILLLLFLVALIpdqgrniqakaedesdklvdppkveeklgavpnglstdsDVAKREAESISKRSLRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLtdkevlgegdntkLEIQIKLDKEKKILSIrdrgigmtKEDLIKNLGTIAKSGTSAFVEKMQtsgdlnligqfgvGFYSVYLVADYVEVISkhnddkqyvweskadgafaisedtwneplgrgtEIRLHLRDEAGEYLEESKLKELVKKYSEFInfpiyiwaskevdvdvptdeddssdeeEKAEKEeeteksesesedededsekkpktktvKETTFEWELLNDVKAIwlrnpkevtEEEYAKFYHSLVkdfsdekplawshfnaegdvefkavlfvppkaphdlyesYYNTNKANLKLYVRRVFISDEFDELLPKYLNFLKglvdsdtlplnVSREMLQQHSSLKTIKKKLIRKALDMIRKIAeedpdestgkdkkdvekfsddddkkgqYTKFWNEFGKSIKLGIIEDAANRNRLAKLLRFERYLFYSLNLSyeyfyfsrislpfvsasfshgvctll
MRKWTIPSILLLLFLVALIPDQGRNIQAKaedesdklvdppkveeklgavpnglstdsdvaKREAEsiskrslrnnaekfEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLtdkevlgegdntkleiqikldkekkilsirdrgigmtkeDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGafaisedtwneplgrgTEIRLHLRDEAGEYLEESKLKELVKKYSEFINFPIYIWASKEVDVDVPtdeddssdeeekaekeeeteksesesedededsekkpktktvkettfewellndvkaiWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTNKANLKLYVRRVFISDEFDELLPKYLNFLKGLVDSDTLPLNVSREMlqqhsslktikkKLIRKALDMIRKiaeedpdestgkdkkdvekfsddddkkgqyTKFWNEFGKSIKLGIIEDAANRNRLAKLLRFERYLFYSLNLSYEYFYFSRISLPFVSASFSHGVCTLL
MRKWTIPSIllllflvalIPDQGRNIQAKAEDESDKLVDPPKVEEKLGAVPNGLSTDSDVAKREAESISKRSLRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIRLHLRDEAGeyleesklkelvkkyseFINFPIYIWASkevdvdvptdeddssdeeekaekeeeteksesesedededsekkpktktvkettfeweLLNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTNKANLKLYVRRVFISDEFDELLPKYLNFLKGLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKALDMIRKIAEEDPDESTGKDKKDVEKFSDDDDKKGQYTKFWNEFGKSIKLGIIEDAANRNRLAKLLRFERYLFYSLNLSYEYFYFSRISLPFVSASFSHGVCTLL
***WTIPSILLLLFLVALIPD**********************************************************FEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIRLHLRDEAGEYLEESKLKELVKKYSEFINFPIYIWASKEVD************************************************TTFEWELLNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTNKANLKLYVRRVFISDEFDELLPKYLNFLKGLVDSDTLPLNVS***********TIKKKLIRKALDMI*******************************YTKFWNEFGKSIKLGIIEDAANRNRLAKLLRFERYLFYSLNLSYEYFYFSRISLPFVSASFSHGVCT**
**KWTIPSILLLLFLVALIPDQGRN*********************************************************QAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFV**********LIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIRLHLRDEAGEYLEESKLKELVKKYSEFINFPIYIWASKEVD************************************************TTFEWELLNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTNKANLKLYVRRVFISDEFDELLPKYLNFLKGLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKALDMIRKIAEEDP*********************GQYTKFWNEFGKSIKLGIIEDAANRNRLAKLLRFERYLFY*LNLSYEYFYFSRISLPFVSASFSHGVCTLL
MRKWTIPSILLLLFLVALIPDQGRNIQA**********DPPKVEEKLGAVPNGLST*************KRSLRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIRLHLRDEAGEYLEESKLKELVKKYSEFINFPIYIWASKEVDV********************************************VKETTFEWELLNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTNKANLKLYVRRVFISDEFDELLPKYLNFLKGLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKALDMIRKIAE*********************DKKGQYTKFWNEFGKSIKLGIIEDAANRNRLAKLLRFERYLFYSLNLSYEYFYFSRISLPFVSASFSHGVCTLL
*RKWTIPSILLLLFLVALIPDQGRNIQAKAEDESDKLVDPPKVEEKL*AVPN***TD**VAKRE**********NNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIRLHLRDEAGEYLEESKLKELVKKYSEFINFPIYIWASKEVD***************************************KPKTKTVKETTFEWELLNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTNKANLKLYVRRVFISDEFDELLPKYLNFLKGLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKALDMIRKIAEE******************DDDKKGQYTKFWNEFGKSIKLGIIEDAANRNRLAKLLRFERYLFYSLNLSYEYFYFSRISLPFVSASFSHGVC***
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SSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MRKWTIPSILLLLFLVALIPDQGRNIQAKAEDESDKLVDPPKVEEKLGAVPNGLSTDSDVAKREAESISKRSLRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIRLHLRDEAGEYLEESKLKELVKKYSEFINFPIYIWASKEVDVDVPTDEDDSxxxxxxxxxxxxxxxxxxxxxxxxxxSEKKPKTKTVKETTFEWELLNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTNKANLKLYVRRVFISDEFDELLPKYLNFLKGLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKALDMIRKIAEEDPDESTGKDKKDVEKFSDDDDKKGQYTKFWNEFGKSIKLGIIEDAANRNRLAKLLRFERYLFYSLNLSYEYFYFSRISLPFVSASFSHGVCTLL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query584 2.2.26 [Sep-21-2011]
P35016 817 Endoplasmin homolog OS=Ca N/A no 0.936 0.669 0.832 0.0
Q9STX5 823 Endoplasmin homolog OS=Ar yes no 0.929 0.659 0.813 0.0
P36183 809 Endoplasmin homolog OS=Ho N/A no 0.924 0.667 0.806 0.0
Q66HD0 804 Endoplasmin OS=Rattus nor yes no 0.852 0.619 0.520 1e-136
Q95M18 804 Endoplasmin OS=Bos taurus yes no 0.851 0.618 0.523 1e-134
P08113 802 Endoplasmin OS=Mus muscul yes no 0.852 0.620 0.518 1e-134
P41148 804 Endoplasmin OS=Canis fami yes no 0.851 0.618 0.523 1e-133
P08110 795 Endoplasmin OS=Gallus gal yes no 0.804 0.591 0.537 1e-133
Q29092 804 Endoplasmin OS=Sus scrofa yes no 0.851 0.618 0.525 1e-133
Q4R520 804 Endoplasmin OS=Macaca fas N/A no 0.851 0.618 0.523 1e-132
>sp|P35016|ENPL_CATRO Endoplasmin homolog OS=Catharanthus roseus GN=HSP90 PE=2 SV=1 Back     alignment and function desciption
 Score =  863 bits (2230), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 456/548 (83%), Positives = 496/548 (90%), Gaps = 1/548 (0%)

Query: 1   MRKWTIPSILLLLFLVALIPDQGRNIQAKAEDESDKLVDPPKVEEKLGAVPNGLSTDSDV 60
           MRKWT+PS+L LL        QGR I A AE +SD  VDPPKVE+K+GAVPNGLSTDSDV
Sbjct: 1   MRKWTVPSVLFLLCPSLSSSCQGRKIHANAEADSDAPVDPPKVEDKIGAVPNGLSTDSDV 60

Query: 61  AKREAESISKRSLRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIR 120
           AKREAES+S R+LR++AEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIR
Sbjct: 61  AKREAESMSMRNLRSDAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIR 120

Query: 121 FLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAF 180
           FL+LTDKE+LGEGD  KLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAF
Sbjct: 121 FLALTDKEILGEGDTAKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAF 180

Query: 181 VEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWN 240
           VEKMQTSGDLNLIGQFGVGFYSVYLV DYVEVISKHNDDKQY+WESKADGAFAISED WN
Sbjct: 181 VEKMQTSGDLNLIGQFGVGFYSVYLVPDYVEVISKHNDDKQYIWESKADGAFAISEDVWN 240

Query: 241 EPLGRGTEIRLHLRDEAGEYLEESKLKELVKKYSEFINFPIYIWASKEVDVDVPTDEDDS 300
           EPLGRGTEIRLHLRDEA EYL+E KLKELVK+YSEFINFPIY+WASKEV+V+V   E+D 
Sbjct: 241 EPLGRGTEIRLHLRDEAQEYLDEFKLKELVKRYSEFINFPIYLWASKEVEVEV-PAEEDD 299

Query: 301 SDEEEKAEKEEETEKSESESEDEDEDSEKKPKTKTVKETTFEWELLNDVKAIWLRNPKEV 360
           S ++E  + E  + +   E E E E+ EKKPKTK VKETT+EWELLND+KAIWLRNPK+V
Sbjct: 300 SSDDEDNKSESSSSEEGEEEETEKEEDEKKPKTKKVKETTYEWELLNDMKAIWLRNPKDV 359

Query: 361 TEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTNKAN 420
           T++EY KFYHSL KDFS+EKPLAWSHF AEGDVEFKA   +PPKAP DLYESYYN+NK+N
Sbjct: 360 TDDEYTKFYHSLAKDFSEEKPLAWSHFTAEGDVEFKAFTLLPPKAPQDLYESYYNSNKSN 419

Query: 421 LKLYVRRVFISDEFDELLPKYLNFLKGLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKA 480
           LKLYVRRVFISDEFDELLPKYLNFLKGLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKA
Sbjct: 420 LKLYVRRVFISDEFDELLPKYLNFLKGLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKA 479

Query: 481 LDMIRKIAEEDPDESTGKDKKDVEKFSDDDDKKGQYTKFWNEFGKSIKLGIIEDAANRNR 540
           LDMIRKIA+EDPDE+  KDKK+VE+ +D+D+KKGQY KFWNEFGKSIKLGIIEDAANRNR
Sbjct: 480 LDMIRKIADEDPDEANDKDKKEVEESTDNDEKKGQYAKFWNEFGKSIKLGIIEDAANRNR 539

Query: 541 LAKLLRFE 548
           LAKLLRFE
Sbjct: 540 LAKLLRFE 547
May have a molecular chaperone role in the processing of secreted materials.
Catharanthus roseus (taxid: 4058)
>sp|Q9STX5|ENPL_ARATH Endoplasmin homolog OS=Arabidopsis thaliana GN=SHD PE=1 SV=1 Back     alignment and function description
>sp|P36183|ENPL_HORVU Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1 Back     alignment and function description
>sp|Q66HD0|ENPL_RAT Endoplasmin OS=Rattus norvegicus GN=Hsp90b1 PE=1 SV=2 Back     alignment and function description
>sp|Q95M18|ENPL_BOVIN Endoplasmin OS=Bos taurus GN=HSP90B1 PE=2 SV=1 Back     alignment and function description
>sp|P08113|ENPL_MOUSE Endoplasmin OS=Mus musculus GN=Hsp90b1 PE=1 SV=2 Back     alignment and function description
>sp|P41148|ENPL_CANFA Endoplasmin OS=Canis familiaris GN=HSP90B1 PE=1 SV=1 Back     alignment and function description
>sp|P08110|ENPL_CHICK Endoplasmin OS=Gallus gallus GN=HSP90B1 PE=1 SV=1 Back     alignment and function description
>sp|Q29092|ENPL_PIG Endoplasmin OS=Sus scrofa GN=HSP90B1 PE=2 SV=3 Back     alignment and function description
>sp|Q4R520|ENPL_MACFA Endoplasmin OS=Macaca fascicularis GN=HSP90B1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query584
224085900 823 predicted protein [Populus trichocarpa] 0.934 0.663 0.885 0.0
225457939 818 PREDICTED: endoplasmin homolog [Vitis vi 0.928 0.662 0.879 0.0
356553371 816 PREDICTED: endoplasmin homolog [Glycine 0.934 0.669 0.879 0.0
356564371 814 PREDICTED: endoplasmin homolog [Glycine 0.934 0.670 0.872 0.0
255538970 816 endoplasmin, putative [Ricinus communis] 0.933 0.667 0.866 0.0
365189292 812 Heat shock protein 90 [Nicotiana tabacum 0.936 0.673 0.863 0.0
357438459 818 Endoplasmin-like protein [Medicago trunc 0.934 0.667 0.846 0.0
449469875 817 PREDICTED: endoplasmin homolog [Cucumis 0.933 0.667 0.856 0.0
365189290 811 Heat shock protein 90 [Nicotiana tabacum 0.934 0.673 0.857 0.0
147865450 1084 hypothetical protein VITISV_028074 [Viti 0.912 0.491 0.831 0.0
>gi|224085900|ref|XP_002307732.1| predicted protein [Populus trichocarpa] gi|222857181|gb|EEE94728.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  942 bits (2435), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 485/548 (88%), Positives = 514/548 (93%), Gaps = 2/548 (0%)

Query: 1   MRKWTIPSILLLLFLVALIPDQGRNIQAKAEDESDKLVDPPKVEEKLGAVPNGLSTDSDV 60
           MRKWT+PS+LLLL L++LI DQG+ + AKAED+SD LVDPPKVEEKLGAVPNGLSTDSDV
Sbjct: 1   MRKWTVPSVLLLLCLLSLISDQGQKLHAKAEDDSDSLVDPPKVEEKLGAVPNGLSTDSDV 60

Query: 61  AKREAESISKRSLRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIR 120
            KRE+ESISKR+LRN AEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIR
Sbjct: 61  VKRESESISKRTLRNTAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIR 120

Query: 121 FLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAF 180
           FLSLTDKEVLGEGDN KL+IQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAF
Sbjct: 121 FLSLTDKEVLGEGDNAKLDIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAF 180

Query: 181 VEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWN 240
           VEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHN+DKQYVWESKADGAFAISEDTWN
Sbjct: 181 VEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNEDKQYVWESKADGAFAISEDTWN 240

Query: 241 EPLGRGTEIRLHLRDEAGEYLEESKLKELVKKYSEFINFPIYIWASKEVDVDVPTDEDDS 300
           EPLGRGTEIRLHLR+EAGEYLEESKLK+LVKKYSEFINFPIY+WASKEVDV+VP DED+S
Sbjct: 241 EPLGRGTEIRLHLREEAGEYLEESKLKDLVKKYSEFINFPIYLWASKEVDVEVPADEDES 300

Query: 301 SDEEEKAEKEEETEKSESESEDEDEDSEKKPKTKTVKETTFEWELLNDVKAIWLRNPKEV 360
           SDE+E   +   ++  +SE + EDED+E KPKTK +KETT+EWELLNDVKAIWLRNPKEV
Sbjct: 301 SDEDETTAESSSSDDGDSE-KSEDEDAEDKPKTKKIKETTYEWELLNDVKAIWLRNPKEV 359

Query: 361 TEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTNKAN 420
           TEEEY KFYHSL KD  DEKPLAWSHF AEGDVEFKAVLFVPPKAPHDLYESYYNTNKAN
Sbjct: 360 TEEEYTKFYHSLAKDLGDEKPLAWSHFTAEGDVEFKAVLFVPPKAPHDLYESYYNTNKAN 419

Query: 421 LKLYVRRVFISDEFDELLPKYLNFLKGLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKA 480
           LKLYVRRVFISDEFDELLPKYLNFL GLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKA
Sbjct: 420 LKLYVRRVFISDEFDELLPKYLNFLMGLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKA 479

Query: 481 LDMIRKIAEEDPDESTGKDKKDVEKFSDDDDKKGQYTKFWNEFGKSIKLGIIEDAANRNR 540
           LDMIRKIA+EDPDE+  KDKKDVE  S DD+KKGQY KFWNEFGKSIKLGIIED+ NRNR
Sbjct: 480 LDMIRKIADEDPDEANDKDKKDVEN-SSDDEKKGQYAKFWNEFGKSIKLGIIEDSVNRNR 538

Query: 541 LAKLLRFE 548
           LAKLLRFE
Sbjct: 539 LAKLLRFE 546

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225457939|ref|XP_002273785.1| PREDICTED: endoplasmin homolog [Vitis vinifera] gi|302142682|emb|CBI19885.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356553371|ref|XP_003545030.1| PREDICTED: endoplasmin homolog [Glycine max] Back     alignment and taxonomy information
>gi|356564371|ref|XP_003550428.1| PREDICTED: endoplasmin homolog [Glycine max] Back     alignment and taxonomy information
>gi|255538970|ref|XP_002510550.1| endoplasmin, putative [Ricinus communis] gi|223551251|gb|EEF52737.1| endoplasmin, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|365189292|dbj|BAL42333.1| Heat shock protein 90 [Nicotiana tabacum] Back     alignment and taxonomy information
>gi|357438459|ref|XP_003589505.1| Endoplasmin-like protein [Medicago truncatula] gi|355478553|gb|AES59756.1| Endoplasmin-like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|449469875|ref|XP_004152644.1| PREDICTED: endoplasmin homolog [Cucumis sativus] gi|449503954|ref|XP_004162237.1| PREDICTED: endoplasmin homolog [Cucumis sativus] Back     alignment and taxonomy information
>gi|365189290|dbj|BAL42332.1| Heat shock protein 90 [Nicotiana tabacum] Back     alignment and taxonomy information
>gi|147865450|emb|CAN79404.1| hypothetical protein VITISV_028074 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query584
UNIPROTKB|B9R8A7 816 RCOM_1598250 "Endoplasmin, put 0.489 0.350 0.835 6.6e-221
TAIR|locus:2135887 823 SHD "SHEPHERD" [Arabidopsis th 0.488 0.346 0.769 9.2e-213
UNIPROTKB|Q4R520 804 HSP90B1 "Endoplasmin" [Macaca 0.431 0.313 0.531 4e-120
UNIPROTKB|P14625 803 HSP90B1 "Endoplasmin" [Homo sa 0.431 0.313 0.531 4e-120
UNIPROTKB|Q5R6F7 804 HSP90B1 "Endoplasmin" [Pongo a 0.431 0.313 0.527 3.5e-119
FB|FBgn0039562 787 Gp93 "Glycoprotein 93" [Drosop 0.434 0.322 0.5 1.7e-115
WB|WBGene00011480 760 enpl-1 [Caenorhabditis elegans 0.388 0.298 0.529 3.5e-113
ASPGD|ASPL0000018308 700 hsp90 [Emericella nidulans (ta 0.351 0.292 0.570 4e-112
UNIPROTKB|G4MLM8 702 MGG_06759 "Heat shock protein 0.351 0.292 0.560 3.1e-110
UNIPROTKB|F1NWB7 795 HSP90B1 "Endoplasmin" [Gallus 0.412 0.303 0.536 4e-110
UNIPROTKB|B9R8A7 RCOM_1598250 "Endoplasmin, putative" [Ricinus communis (taxid:3988)] Back     alignment and assigned GO terms
 Score = 1200 (427.5 bits), Expect = 6.6e-221, Sum P(2) = 6.6e-221
 Identities = 239/286 (83%), Positives = 251/286 (87%)

Query:     1 MRKWTIPSIXXXXXXXXXIPDQGRNIQAKAEDESDKLVDPPKVEEKLGAVPNGLSTDSDV 60
             MRKWTIPS          I DQGRN+ A AE +S   VDPPKVEEKLGAVPNGLSTDSDV
Sbjct:     1 MRKWTIPSALLLLCLLSLISDQGRNLHANAEADSQNPVDPPKVEEKLGAVPNGLSTDSDV 60

Query:    61 AKREAESISKRSLRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIR 120
              KRE+ESISKRSLR++AEKF+FQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIR
Sbjct:    61 VKRESESISKRSLRSDAEKFQFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIR 120

Query:   121 FLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAF 180
             FL+LTDKEVLGEG+NTKL+IQIKLDKEKKILSIRD+GIGMTKEDLIKNLGTIAKSGTSAF
Sbjct:   121 FLALTDKEVLGEGENTKLDIQIKLDKEKKILSIRDKGIGMTKEDLIKNLGTIAKSGTSAF 180

Query:   181 VEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWN 240
             VEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQ+VWESKADGAFAISEDTWN
Sbjct:   181 VEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQHVWESKADGAFAISEDTWN 240

Query:   241 EPLGRGTEIRLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIWAS 286
             EPLGRGTEIRLHLRDEAG                 FINFPIY+WAS
Sbjct:   241 EPLGRGTEIRLHLRDEAGEYLEESKLKELVKKYSEFINFPIYLWAS 286
GO:0005783 "endoplasmic reticulum" evidence=IDA
TAIR|locus:2135887 SHD "SHEPHERD" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q4R520 HSP90B1 "Endoplasmin" [Macaca fascicularis (taxid:9541)] Back     alignment and assigned GO terms
UNIPROTKB|P14625 HSP90B1 "Endoplasmin" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q5R6F7 HSP90B1 "Endoplasmin" [Pongo abelii (taxid:9601)] Back     alignment and assigned GO terms
FB|FBgn0039562 Gp93 "Glycoprotein 93" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
WB|WBGene00011480 enpl-1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
ASPGD|ASPL0000018308 hsp90 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
UNIPROTKB|G4MLM8 MGG_06759 "Heat shock protein 90" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
UNIPROTKB|F1NWB7 HSP90B1 "Endoplasmin" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P02829HSP82_YEASTNo assigned EC number0.51690.75680.6234yesno
P41887HSP90_SCHPONo assigned EC number0.53580.750.6221yesno
Q29092ENPL_PIGNo assigned EC number0.52530.85100.6181yesno
P36183ENPL_HORVUNo assigned EC number0.80650.92460.6674N/Ano
Q9STX5ENPL_ARATHNo assigned EC number0.81380.92970.6597yesno
P40292HSP90_ASPFUNo assigned EC number0.52000.75680.6260yesno
Q95M18ENPL_BOVINNo assigned EC number0.52350.85100.6181yesno
P35016ENPL_CATRONo assigned EC number0.83210.93660.6695N/Ano
P41148ENPL_CANFANo assigned EC number0.52350.85100.6181yesno
O43109HSP90_PODASNo assigned EC number0.54230.74480.6205yesno
P14625ENPL_HUMANNo assigned EC number0.52350.85100.6189yesno
P08113ENPL_MOUSENo assigned EC number0.51890.85270.6209yesno
Q5R6F7ENPL_PONABNo assigned EC number0.52170.85100.6181yesno
Q66HD0ENPL_RATNo assigned EC number0.52070.85270.6194yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_fgenesh4_pg.C_LG_V1547
SubName- Full=Putative uncharacterized protein; (823 aa)
(Populus trichocarpa)
Predicted Functional Partners:
fgenesh4_pm.C_LG_XV000408
SubName- Full=Putative uncharacterized protein; (204 aa)
     •  0.800
fgenesh4_pm.C_LG_IV000317
SubName- Full=Putative uncharacterized protein; (354 aa)
     •  0.800
fgenesh4_pg.C_LG_II001977
cc-nbs-lrr resistance protein (920 aa)
     •  0.800
estExt_Genewise1_v1.C_440672
hypothetical protein (360 aa)
     •  0.800
eugene3.26620001
Predicted protein (75 aa)
  •     0.462

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query584
PRK05218 613 PRK05218, PRK05218, heat shock protein 90; Provisi 1e-175
COG0326 623 COG0326, HtpG, Molecular chaperone, HSP90 family [ 1e-158
PTZ00272 701 PTZ00272, PTZ00272, heat shock protein 83 kDa (Hsp 1e-143
pfam00183 529 pfam00183, HSP90, Hsp90 protein 1e-130
PTZ00130 814 PTZ00130, PTZ00130, heat shock protein 90; Provisi 1e-128
PRK14083 601 PRK14083, PRK14083, HSP90 family protein; Provisio 4e-32
cd00075103 cd00075, HATPase_c, Histidine kinase-like ATPases; 7e-10
smart00387111 smart00387, HATPase_c, Histidine kinase-like ATPas 2e-09
pfam02518111 pfam02518, HATPase_c, Histidine kinase-, DNA gyras 6e-09
pfam13589134 pfam13589, HATPase_c_3, Histidine kinase-, DNA gyr 9e-06
TIGR009271096 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger 1e-04
TIGR01052488 TIGR01052, top6b, DNA topoisomerase VI, B subunit 0.001
TIGR00585312 TIGR00585, mutl, DNA mismatch repair protein MutL 0.002
>gnl|CDD|235366 PRK05218, PRK05218, heat shock protein 90; Provisional Back     alignment and domain information 
 Score =  510 bits (1315), Expect = e-175
 Identities = 203/477 (42%), Positives = 280/477 (58%), Gaps = 90/477 (18%)

Query: 76  NAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDN 135
             E  EFQAEV +L+ ++I+SLYSNK+IFLRELISNASDA+DK+RF +LTD  +     +
Sbjct: 2   AMETGEFQAEVKQLLHLMIHSLYSNKEIFLRELISNASDAIDKLRFEALTDPALYEGDGD 61

Query: 136 TKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQ--TSGDLNLI 193
             L+I+I  DKE + L+I D GIGMT+E++I+NLGTIAKSGT  F+EK++     D  LI
Sbjct: 62  --LKIRISFDKEARTLTISDNGIGMTREEVIENLGTIAKSGTKEFLEKLKGDQKKDSQLI 119

Query: 194 GQFGVGFYSVYLVADYVEVISKH--NDDKQYVWESKADGAFAISEDTWNEPLGRGTEIRL 251
           GQFGVGFYS ++VAD V VI++      +   WES  +G + I E    E   RGTEI L
Sbjct: 120 GQFGVGFYSAFMVADKVTVITRSAGPAAEAVRWESDGEGEYTIEEIEKEE---RGTEITL 176

Query: 252 HLRDEAGEYLEESKLKELVKKYSEFINFPIYIWASKEVDVDVPTDEDDSSDEEEKAEKEE 311
           HL+++  E+L+E +++ ++KKYS+FI  PI +                        ++EE
Sbjct: 177 HLKEDEDEFLDEWRIRSIIKKYSDFIPVPIKLE-----------------------KEEE 213

Query: 312 ETEKSESESEDEDEDSEKKPKTKTVKETTFEWELLNDVKAIWLRNPKEVTEEEYAKFYHS 371
           ET                                +N   A+W R+  E+T+EEY +FY  
Sbjct: 214 ET--------------------------------INSASALWTRSKSEITDEEYKEFYKH 241

Query: 372 LVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTNKANLKLYVRRVFIS 431
           L  DF  + PL W H N EG  E+  +L++P KAP DL   +    K  LKLYV+RVFI 
Sbjct: 242 LAHDF--DDPLFWIHNNVEGPFEYTGLLYIPKKAPFDL---FNRDRKGGLKLYVKRVFIM 296

Query: 432 DEFDELLPKYLNFLKGLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKALDMIRKIAEED 491
           D+ +ELLP+YL F+KG++DS+ LPLNVSRE+LQ+   +K I+K + +K LD + K+A+ D
Sbjct: 297 DDAEELLPEYLRFVKGVIDSEDLPLNVSREILQEDRVVKKIRKAITKKVLDELEKLAKND 356

Query: 492 PDESTGKDKKDVEKFSDDDDKKGQYTKFWNEFGKSIKLGIIEDAANRNRLAKLLRFE 548
            ++                     Y KFW EFG  +K G+ ED ANR +LAKLLRF 
Sbjct: 357 REK---------------------YEKFWKEFGPVLKEGLYEDFANREKLAKLLRFA 392

Length = 613
>gnl|CDD|223403 COG0326, HtpG, Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|240341 PTZ00272, PTZ00272, heat shock protein 83 kDa (Hsp83); Provisional Back     alignment and domain information
>gnl|CDD|215774 pfam00183, HSP90, Hsp90 protein Back     alignment and domain information
>gnl|CDD|185466 PTZ00130, PTZ00130, heat shock protein 90; Provisional Back     alignment and domain information
>gnl|CDD|237603 PRK14083, PRK14083, HSP90 family protein; Provisional Back     alignment and domain information
>gnl|CDD|238030 cd00075, HATPase_c, Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins Back     alignment and domain information
>gnl|CDD|214643 smart00387, HATPase_c, Histidine kinase-like ATPases Back     alignment and domain information
>gnl|CDD|217081 pfam02518, HATPase_c, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Back     alignment and domain information
>gnl|CDD|222246 pfam13589, HATPase_c_3, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Back     alignment and domain information
>gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger Back     alignment and domain information
>gnl|CDD|233250 TIGR01052, top6b, DNA topoisomerase VI, B subunit Back     alignment and domain information
>gnl|CDD|233035 TIGR00585, mutl, DNA mismatch repair protein MutL Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 584
KOG0020 785 consensus Endoplasmic reticulum glucose-regulated 100.0
PTZ00130 814 heat shock protein 90; Provisional 100.0
COG0326 623 HtpG Molecular chaperone, HSP90 family [Posttransl 100.0
PTZ00272 701 heat shock protein 83 kDa (Hsp83); Provisional 100.0
KOG0019 656 consensus Molecular chaperone (HSP90 family) [Post 100.0
PRK05218 613 heat shock protein 90; Provisional 100.0
PRK14083 601 HSP90 family protein; Provisional 100.0
PF00183 531 HSP90: Hsp90 protein; InterPro: IPR001404 Molecula 100.0
PF13589137 HATPase_c_3: Histidine kinase-, DNA gyrase B-, and 99.68
TIGR00585312 mutl DNA mismatch repair protein MutL. All protein 99.4
COG1389538 DNA topoisomerase VI, subunit B [DNA replication, 99.22
PRK04184535 DNA topoisomerase VI subunit B; Validated 99.13
COG0323 638 MutL DNA mismatch repair enzyme (predicted ATPase) 99.13
PRK00095 617 mutL DNA mismatch repair protein; Reviewed 99.03
TIGR01052488 top6b DNA topoisomerase VI, B subunit. This model 99.01
PRK14868 795 DNA topoisomerase VI subunit B; Provisional 98.85
PRK14867 659 DNA topoisomerase VI subunit B; Provisional 98.42
PRK05559 631 DNA topoisomerase IV subunit B; Reviewed 98.37
TIGR01055 625 parE_Gneg DNA topoisomerase IV, B subunit, proteob 98.21
smart00433 594 TOP2c TopoisomeraseII. Eukaryotic DNA topoisomeras 98.2
KOG1979 694 consensus DNA mismatch repair protein - MLH1 famil 98.19
PF02518111 HATPase_c: Histidine kinase-, DNA gyrase B-, and H 98.13
PRK14939 756 gyrB DNA gyrase subunit B; Provisional 98.02
TIGR01059 654 gyrB DNA gyrase, B subunit. This model describes t 97.96
PRK05644 638 gyrB DNA gyrase subunit B; Validated 97.96
KOG1978 672 consensus DNA mismatch repair protein - MLH2/PMS1/ 97.81
cd00075103 HATPase_c Histidine kinase-like ATPases; This fami 97.44
KOG1977 1142 consensus DNA mismatch repair protein - MLH3 famil 97.14
PRK10755356 sensor protein BasS/PmrB; Provisional 97.08
TIGR02916679 PEP_his_kin putative PEP-CTERM system histidine ki 97.05
smart00387111 HATPase_c Histidine kinase-like ATPases. Histidine 97.01
PRK11100475 sensory histidine kinase CreC; Provisional 96.87
TIGR01058 637 parE_Gpos DNA topoisomerase IV, B subunit, Gram-po 96.87
PRK10549466 signal transduction histidine-protein kinase BaeS; 96.85
TIGR02938494 nifL_nitrog nitrogen fixation negative regulator N 96.82
TIGR01386457 cztS_silS_copS heavy metal sensor kinase. Members 96.77
PRK11086542 sensory histidine kinase DcuS; Provisional 96.69
PRK10604433 sensor protein RstB; Provisional 96.67
PRK09470461 cpxA two-component sensor protein; Provisional 96.62
PRK10364457 sensor protein ZraS; Provisional 96.55
PRK15347921 two component system sensor kinase SsrA; Provision 96.48
PRK11466914 hybrid sensory histidine kinase TorS; Provisional 96.38
PLN03237 1465 DNA topoisomerase 2; Provisional 96.34
PRK11360607 sensory histidine kinase AtoS; Provisional 96.33
TIGR02956968 TMAO_torS TMAO reductase sytem sensor TorS. This p 96.3
PRK11006430 phoR phosphate regulon sensor protein; Provisional 96.3
PRK10815485 sensor protein PhoQ; Provisional 96.25
PLN03128 1135 DNA topoisomerase 2; Provisional 96.22
COG0187 635 GyrB Type IIA topoisomerase (DNA gyrase/topo II, t 96.13
PTZ00108 1388 DNA topoisomerase 2-like protein; Provisional 95.96
PRK09303380 adaptive-response sensory kinase; Validated 95.7
TIGR02966333 phoR_proteo phosphate regulon sensor kinase PhoR. 95.68
PHA02569602 39 DNA topoisomerase II large subunit; Provisional 95.59
PRK15053545 dpiB sensor histidine kinase DpiB; Provisional 95.3
PRK11091779 aerobic respiration control sensor protein ArcB; P 95.28
PRK10841924 hybrid sensory kinase in two-component regulatory 95.22
COG4191603 Signal transduction histidine kinase regulating C4 95.15
PRK13837828 two-component VirA-like sensor kinase; Provisional 95.13
PRK10618894 phosphotransfer intermediate protein in two-compon 95.04
PRK03660146 anti-sigma F factor; Provisional 94.77
TIGR01925137 spIIAB anti-sigma F factor. This model describes t 94.75
PTZ00109 903 DNA gyrase subunit b; Provisional 94.66
PRK10490895 sensor protein KdpD; Provisional 94.54
COG0642336 BaeS Signal transduction histidine kinase [Signal 94.41
PRK09835482 sensor kinase CusS; Provisional 94.36
PRK10337449 sensor protein QseC; Provisional 94.26
PRK09467435 envZ osmolarity sensor protein; Provisional 94.14
PRK11107919 hybrid sensory histidine kinase BarA; Provisional 94.1
COG3290537 CitA Signal transduction histidine kinase regulati 93.97
TIGR03785703 marine_sort_HK proteobacterial dedicated sortase s 93.89
PRK099591197 hybrid sensory histidine kinase in two-component r 93.88
COG5000712 NtrY Signal transduction histidine kinase involved 93.49
PRK04069161 serine-protein kinase RsbW; Provisional 92.98
PF13581125 HATPase_c_2: Histidine kinase-like ATPase domain 92.98
TIGR01924159 rsbW_low_gc serine-protein kinase RsbW. This model 92.2
COG0643716 CheA Chemotaxis protein histidine kinase and relat 91.73
PRK10600569 nitrate/nitrite sensor protein NarX; Provisional 91.59
PRK13560807 hypothetical protein; Provisional 91.21
PRK10547670 chemotaxis protein CheA; Provisional 91.19
PRK11644495 sensory histidine kinase UhpB; Provisional 90.53
COG4585365 Signal transduction histidine kinase [Signal trans 90.45
COG3920221 Signal transduction histidine kinase [Signal trans 90.3
PRK11073348 glnL nitrogen regulation protein NR(II); Provision 89.9
KOG0787414 consensus Dehydrogenase kinase [Signal transductio 88.44
COG3850574 NarQ Signal transduction histidine kinase, nitrate 84.58
PRK13557540 histidine kinase; Provisional 83.58
COG2172146 RsbW Anti-sigma regulatory factor (Ser/Thr protein 83.07
COG4251750 Bacteriophytochrome (light-regulated signal transd 82.42
COG2972456 Predicted signal transduction protein with a C-ter 81.74
PRK10935565 nitrate/nitrite sensor protein NarQ; Provisional 80.22
>KOG0020 consensus Endoplasmic reticulum glucose-regulated protein (GRP94/endoplasmin), HSP90 family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
Probab=100.00  E-value=2.2e-154  Score=1213.34  Aligned_cols=531  Identities=61%  Similarity=0.995  Sum_probs=491.2

Q ss_pred             CCcccchhHHHHHHHHHhcCCCcccccccccccccccCCCcccccccCCCCCCCCCchhhhhhhhhhhh--------hhh
Q 007926            1 MRKWTIPSILLLLFLVALIPDQGRNIQAKAEDESDKLVDPPKVEEKLGAVPNGLSTDSDVAKREAESIS--------KRS   72 (584)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~   72 (584)
                      |+.+.+.+++||+.+++++++.....++             .+++++|.+++|++++.++++|++++|+        .|+
T Consensus         1 m~~~~lv~~~~L~~~~~l~ad~~~~~~~-------------~~ee~~~~~~e~sk~e~e~~~ree~si~lDgl~~~q~ke   67 (785)
T KOG0020|consen    1 MRKRTLVSVLLLFGFLFLLADDERKLHA-------------TAEEDLGDVTEGSKTEEEIGGREEESIQLDGLNVSQIKE   67 (785)
T ss_pred             CcchhHHHHHHHHHHHHhcccccccccc-------------chhhhccccCCCCcchhhhccccchheecccccHHHHHH
Confidence            8888888888888777888777665554             4667799999999999999999999998        899


Q ss_pred             hcccccceeeeechhchHhHHhhcCCCCchhHHHHhhhcHHHHHHHHHhhhccCccccCCCCCCccEEEEEEcCCccEEE
Q 007926           73 LRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILS  152 (584)
Q Consensus        73 ~~~~~e~~~Fqadv~rLl~lL~~sLYs~~~vfLRELIqNA~DA~~k~R~~sltd~~~~g~~~~~~l~I~I~~d~~~~~L~  152 (584)
                      +|+.+++|.||++|+|||+||+|+||+|+++|||||||||+||++|+|+++|+|+..+  +.++++.|+|..|++++.|+
T Consensus        68 lR~kaeKf~FQaEVnRmMklIINSLY~NKeIFLRELISNASDAlDKIRllaLtd~~~L--~~~~el~ikIK~Dke~klLh  145 (785)
T KOG0020|consen   68 LRSKAEKFEFQAEVNRMMKLIINSLYRNKEIFLRELISNASDALDKIRLLALTDKDVL--GETEELEIKIKADKEKKLLH  145 (785)
T ss_pred             HHHHhhhhhHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhhhhhhhheeeeeccChhHh--CcCcceEEEEeechhhCeee
Confidence            9999999999999999999999999999999999999999999999999999999999  67899999999999999999


Q ss_pred             EEECCCCCCHHHHHHHHHHHhccchhHHHHhhhhcCC-----CCccccccceeeEEEeecCEEEEEEeeCCCceeEEEec
Q 007926          153 IRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGD-----LNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESK  227 (584)
Q Consensus       153 I~DNGiGMT~eeL~~~LgtIa~Sg~~~f~~~l~~~~~-----~~~IGqFGIGF~S~FmVadkV~V~Sk~~~~~~~~W~s~  227 (584)
                      |+|+|||||++||++||||||+||+++|+++|++.++     .++||||||||||+|+|||+|+|+|+++++.+|+|+|+
T Consensus       146 i~DtGiGMT~edLi~NLGTIAkSGTs~Fl~Km~~~~~~~~~~~dlIGQFGVGFYsAfLVAD~vvVtsKhNdD~QyiWESd  225 (785)
T KOG0020|consen  146 ITDTGIGMTREDLIKNLGTIAKSGTSEFLEKMQDSGDSEGLMNDLIGQFGVGFYSAFLVADRVVVTSKHNDDSQYIWESD  225 (785)
T ss_pred             EecccCCccHHHHHHhhhhhhcccHHHHHHHhhccccchhhHHHHHHhcchhhhhhhhhcceEEEEeccCCccceeeecc
Confidence            9999999999999999999999999999999987544     38999999999999999999999999999999999999


Q ss_pred             CCCceEEEeCCCCCCCCCCcEEEEEeccccccccChHHHHHHHHHHhCCCCcceEeeecceeeccCCCCCCCCchHHHHh
Q 007926          228 ADGAFAISEDTWNEPLGRGTEIRLHLRDEAGEYLEESKLKELVKKYSEFINFPIYIWASKEVDVDVPTDEDDSSDEEEKA  307 (584)
Q Consensus       228 ~~~~f~I~~~~~~~~~~~GT~I~L~Lk~d~~e~l~~~~lk~lvkkys~fi~~PI~l~~~~~~~~~~~~~~~~~~~~~~~~  307 (584)
                      +. +|+|.++|++++++|||+|+|+|++++.+||++++|++||++||+||+|||++|.++++++++|.+|+++..++   
T Consensus       226 an-~FsvseDprg~tL~RGt~ItL~LkeEA~dyLE~dtlkeLvkkYSqFINFpI~lWsSKt~~~E~pvEEe~~t~e~---  301 (785)
T KOG0020|consen  226 AN-SFSVSEDPRGNTLGRGTEITLYLKEEAGDYLEEDTLKELVKKYSQFINFPISLWSSKTVEVEVPVEEEEETEED---  301 (785)
T ss_pred             Cc-ceeeecCCCCCcccCccEEEEEehhhhhhhcchhHHHHHHHHHHHhcCCceeeeeccceeeecccccccccccc---
Confidence            86 99999999999999999999999999999999999999999999999999999999999999998776443221   


Q ss_pred             hhhhhhccccCCCcccccccccCCCcccceeccceeEEecccCcccccCCCCCCHHHHHHHHHHhhcCCCCCCCceeeee
Q 007926          308 EKEEETEKSESESEDEDEDSEKKPKTKTVKETTFEWELLNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHF  387 (584)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~~~~~~we~iN~~~piW~r~~~~vt~eey~~Fyk~l~~~~~~~~PL~~~hf  387 (584)
                        + ..+++    ..++|+++++||||+|++|+|+|+.+|+.+|||+|+|++|+++||..|||++++++  .+||+|+||
T Consensus       302 --~-~ed~e----a~vEEee~EKpKTKKV~kT~wdWel~NdvKpIW~R~p~eV~EdEYt~FYkSlsKds--~dPma~~HF  372 (785)
T KOG0020|consen  302 --S-TEDKE----AAVEEEEEEKPKTKKVEKTVWDWELLNDVKPIWLRKPKEVTEDEYTKFYKSLSKDS--TDPMAYIHF  372 (785)
T ss_pred             --c-ccchh----hhhhhhhhccccccchhhcchhhhhhcccchhhccCchhcchHHHHHHHHhhhccc--cCccceeee
Confidence              0 00111    12233444569999999999999999999999999999999999999999999999  789999999


Q ss_pred             ecccceeeEEEEEeCCCCCcchhhhhhcccccCeeEEeeeeeeccccchhhhhhhhcccccccCCCcCCccchhhhhcch
Q 007926          388 NAEGDVEFKAVLFVPPKAPHDLYESYYNTNKANLKLYVRRVFISDEFDELLPKYLNFLKGLVDSDTLPLNVSREMLQQHS  467 (584)
Q Consensus       388 ~~eg~v~f~~llfiP~~~p~~~~~~~~~~~~~~ikLYvrrVfI~d~~~~llP~yl~FvkGVVDSddLpLNvSRE~lQ~~~  467 (584)
                      .+||+|+||+|||||+.+|.++|+.|+++...+||||||||||||+|.+|||+||+||||||||||||||||||+||||+
T Consensus       373 ~aEGeVtFksiLyVP~~~P~~lf~~Yg~~~~dniKLYVrrVFItDeF~dmmPkYLsFikGvVDSDdLPLNVSrE~LQQHk  452 (785)
T KOG0020|consen  373 TAEGEVTFKSILYVPKKAPRDLFDEYGSKKSDNIKLYVRRVFITDEFHDMMPKYLSFIKGVVDSDDLPLNVSRETLQQHK  452 (785)
T ss_pred             eccccEEEEEEEEeCCCCchHHHHHhccccccceeEEEEEEEecchHHHHhHHHHHHHhhccCcCcCcccccHHHHHHHH
Confidence            99999999999999999999999999878889999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcccccccCCCccchhHHHH-HHHHhchhceeeeccChhhHHHHhccce
Q 007926          468 SLKTIKKKLIRKALDMIRKIAEEDPDESTGKDKKDVEKFSDDDDKKGQYTK-FWNEFGKSIKLGIIEDAANRNRLAKLLR  546 (584)
Q Consensus       468 ~l~~Irk~lv~k~l~~l~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~y~k-f~~~fg~~lK~G~~eD~~nr~~la~Llr  546 (584)
                      +|++|||+||||+|+||++++.+                        +|.. ||++||++||+||+||++||.+||||||
T Consensus       453 llKvIkKKLvrK~LDmikKia~e------------------------~~~d~FW~EFgtniKLGviED~sNr~rLAKLLr  508 (785)
T KOG0020|consen  453 LLKVIKKKLVRKVLDMIKKIAGE------------------------KYDDIFWKEFGTNIKLGVIEDPSNRTRLAKLLR  508 (785)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcc------------------------ccchHHHHHhccceeeeeeeCcccHHHHHHHHh
Confidence            99999999999999999999987                        7766 9999999999999999999999999999


Q ss_pred             eeeccCCCccceee------------ehhhhc------CCchhHhhhhhcCcccc
Q 007926          547 FERYLFYSLNLSYE------------YFYFSR------ISLPFVSASFSHGVCTL  583 (584)
Q Consensus       547 f~ss~~~~~~~s~~------------~~y~~~------~~~p~~~~~~~~g~~~l  583 (584)
                      |+||++++..||++            +||+++      +++|||+++++||+||+
T Consensus       509 Fqss~~~~~~TsLdqYveRMK~kQ~~IyymaGssr~e~E~sPfvERLlkKGyEVi  563 (785)
T KOG0020|consen  509 FQSSNHPTKITSLDQYVERMKEKQDKIYYMAGSSRKEVEKSPFVERLLKKGYEVI  563 (785)
T ss_pred             hhccCCCCCcccHHHHHHHHhhccccEEEecCCcHhhhccCcHHHHHHhcCceEE
Confidence            99999999999985            467664      35999999999999997

>PTZ00130 heat shock protein 90; Provisional Back     alignment and domain information
>COG0326 HtpG Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PTZ00272 heat shock protein 83 kDa (Hsp83); Provisional Back     alignment and domain information
>KOG0019 consensus Molecular chaperone (HSP90 family) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK05218 heat shock protein 90; Provisional Back     alignment and domain information
>PRK14083 HSP90 family protein; Provisional Back     alignment and domain information
>PF00183 HSP90: Hsp90 protein; InterPro: IPR001404 Molecular chaperones, or heat shock proteins (Hsps) are ubiquitous proteins that act to maintain proper protein folding within the cell [] Back     alignment and domain information
>PF13589 HATPase_c_3: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PDB: 3IED_A 2XCM_B 2JKI_B 3OPD_A 2O1V_B 2GQP_A 2O1W_C 1YT2_A 1TC6_A 2H8M_B Back     alignment and domain information
>TIGR00585 mutl DNA mismatch repair protein MutL Back     alignment and domain information
>COG1389 DNA topoisomerase VI, subunit B [DNA replication, recombination, and repair] Back     alignment and domain information
>PRK04184 DNA topoisomerase VI subunit B; Validated Back     alignment and domain information
>COG0323 MutL DNA mismatch repair enzyme (predicted ATPase) [DNA replication, recombination, and repair] Back     alignment and domain information
>PRK00095 mutL DNA mismatch repair protein; Reviewed Back     alignment and domain information
>TIGR01052 top6b DNA topoisomerase VI, B subunit Back     alignment and domain information
>PRK14868 DNA topoisomerase VI subunit B; Provisional Back     alignment and domain information
>PRK14867 DNA topoisomerase VI subunit B; Provisional Back     alignment and domain information
>PRK05559 DNA topoisomerase IV subunit B; Reviewed Back     alignment and domain information
>TIGR01055 parE_Gneg DNA topoisomerase IV, B subunit, proteobacterial Back     alignment and domain information
>smart00433 TOP2c TopoisomeraseII Back     alignment and domain information
>KOG1979 consensus DNA mismatch repair protein - MLH1 family [Replication, recombination and repair] Back     alignment and domain information
>PF02518 HATPase_c: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; InterPro: IPR003594 This domain is found in several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases [], heat shock protein HSP90 [, , ], phytochrome-like ATPases and DNA mismatch repair proteins Back     alignment and domain information
>PRK14939 gyrB DNA gyrase subunit B; Provisional Back     alignment and domain information
>TIGR01059 gyrB DNA gyrase, B subunit Back     alignment and domain information
>PRK05644 gyrB DNA gyrase subunit B; Validated Back     alignment and domain information
>KOG1978 consensus DNA mismatch repair protein - MLH2/PMS1/Pms2 family [Replication, recombination and repair] Back     alignment and domain information
>cd00075 HATPase_c Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins Back     alignment and domain information
>KOG1977 consensus DNA mismatch repair protein - MLH3 family [Replication, recombination and repair] Back     alignment and domain information
>PRK10755 sensor protein BasS/PmrB; Provisional Back     alignment and domain information
>TIGR02916 PEP_his_kin putative PEP-CTERM system histidine kinase Back     alignment and domain information
>smart00387 HATPase_c Histidine kinase-like ATPases Back     alignment and domain information
>PRK11100 sensory histidine kinase CreC; Provisional Back     alignment and domain information
>TIGR01058 parE_Gpos DNA topoisomerase IV, B subunit, Gram-positive Back     alignment and domain information
>PRK10549 signal transduction histidine-protein kinase BaeS; Provisional Back     alignment and domain information
>TIGR02938 nifL_nitrog nitrogen fixation negative regulator NifL Back     alignment and domain information
>TIGR01386 cztS_silS_copS heavy metal sensor kinase Back     alignment and domain information
>PRK11086 sensory histidine kinase DcuS; Provisional Back     alignment and domain information
>PRK10604 sensor protein RstB; Provisional Back     alignment and domain information
>PRK09470 cpxA two-component sensor protein; Provisional Back     alignment and domain information
>PRK10364 sensor protein ZraS; Provisional Back     alignment and domain information
>PRK15347 two component system sensor kinase SsrA; Provisional Back     alignment and domain information
>PRK11466 hybrid sensory histidine kinase TorS; Provisional Back     alignment and domain information
>PLN03237 DNA topoisomerase 2; Provisional Back     alignment and domain information
>PRK11360 sensory histidine kinase AtoS; Provisional Back     alignment and domain information
>TIGR02956 TMAO_torS TMAO reductase sytem sensor TorS Back     alignment and domain information
>PRK11006 phoR phosphate regulon sensor protein; Provisional Back     alignment and domain information
>PRK10815 sensor protein PhoQ; Provisional Back     alignment and domain information
>PLN03128 DNA topoisomerase 2; Provisional Back     alignment and domain information
>COG0187 GyrB Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [DNA replication, recombination, and repair] Back     alignment and domain information
>PTZ00108 DNA topoisomerase 2-like protein; Provisional Back     alignment and domain information
>PRK09303 adaptive-response sensory kinase; Validated Back     alignment and domain information
>TIGR02966 phoR_proteo phosphate regulon sensor kinase PhoR Back     alignment and domain information
>PHA02569 39 DNA topoisomerase II large subunit; Provisional Back     alignment and domain information
>PRK15053 dpiB sensor histidine kinase DpiB; Provisional Back     alignment and domain information
>PRK11091 aerobic respiration control sensor protein ArcB; Provisional Back     alignment and domain information
>PRK10841 hybrid sensory kinase in two-component regulatory system with RcsB and YojN; Provisional Back     alignment and domain information
>COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms] Back     alignment and domain information
>PRK13837 two-component VirA-like sensor kinase; Provisional Back     alignment and domain information
>PRK10618 phosphotransfer intermediate protein in two-component regulatory system with RcsBC; Provisional Back     alignment and domain information
>PRK03660 anti-sigma F factor; Provisional Back     alignment and domain information
>TIGR01925 spIIAB anti-sigma F factor Back     alignment and domain information
>PTZ00109 DNA gyrase subunit b; Provisional Back     alignment and domain information
>PRK10490 sensor protein KdpD; Provisional Back     alignment and domain information
>COG0642 BaeS Signal transduction histidine kinase [Signal transduction mechanisms] Back     alignment and domain information
>PRK09835 sensor kinase CusS; Provisional Back     alignment and domain information
>PRK10337 sensor protein QseC; Provisional Back     alignment and domain information
>PRK09467 envZ osmolarity sensor protein; Provisional Back     alignment and domain information
>PRK11107 hybrid sensory histidine kinase BarA; Provisional Back     alignment and domain information
>COG3290 CitA Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms] Back     alignment and domain information
>TIGR03785 marine_sort_HK proteobacterial dedicated sortase system histidine kinase Back     alignment and domain information
>PRK09959 hybrid sensory histidine kinase in two-component regulatory system with EvgA; Provisional Back     alignment and domain information
>COG5000 NtrY Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation [Signal transduction mechanisms] Back     alignment and domain information
>PRK04069 serine-protein kinase RsbW; Provisional Back     alignment and domain information
>PF13581 HATPase_c_2: Histidine kinase-like ATPase domain Back     alignment and domain information
>TIGR01924 rsbW_low_gc serine-protein kinase RsbW Back     alignment and domain information
>COG0643 CheA Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms] Back     alignment and domain information
>PRK10600 nitrate/nitrite sensor protein NarX; Provisional Back     alignment and domain information
>PRK13560 hypothetical protein; Provisional Back     alignment and domain information
>PRK10547 chemotaxis protein CheA; Provisional Back     alignment and domain information
>PRK11644 sensory histidine kinase UhpB; Provisional Back     alignment and domain information
>COG4585 Signal transduction histidine kinase [Signal transduction mechanisms] Back     alignment and domain information
>COG3920 Signal transduction histidine kinase [Signal transduction mechanisms] Back     alignment and domain information
>PRK11073 glnL nitrogen regulation protein NR(II); Provisional Back     alignment and domain information
>KOG0787 consensus Dehydrogenase kinase [Signal transduction mechanisms] Back     alignment and domain information
>COG3850 NarQ Signal transduction histidine kinase, nitrate/nitrite-specific [Signal transduction mechanisms] Back     alignment and domain information
>PRK13557 histidine kinase; Provisional Back     alignment and domain information
>COG2172 RsbW Anti-sigma regulatory factor (Ser/Thr protein kinase) [Signal transduction mechanisms] Back     alignment and domain information
>COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction mechanisms] Back     alignment and domain information
>COG2972 Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms] Back     alignment and domain information
>PRK10935 nitrate/nitrite sensor protein NarQ; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query584
3peh_A281 Crystal Structure Of The N-Terminal Domain Of An Hs 3e-62
1qy5_A269 Crystal Structure Of The N-Domain Of The Er Hsp90 C 1e-60
1u2o_A236 Crystal Structure Of The N-Domain Of Grp94 Lacking 1e-60
1u0y_A273 N-Domain Of Grp94, With The Charged Domain, In Comp 2e-60
3ft5_A249 Structure Of Hsp90 Bound With A Novel Fragment Leng 5e-60
2xjg_A249 Structure Of Hsp90 With Small Molecule Inhibitor Bo 9e-60
2xjj_A249 Structre Of Hsp90 With Small Molecule Inhibitor Bou 9e-60
2esa_A236 Grp94 N-Terminal Domain Bound To Geldanamycin: Effe 1e-59
2o1u_A 666 Structure Of Full Length Grp94 With Amp-Pnp Bound L 1e-59
2o1u_A 666 Structure Of Full Length Grp94 With Amp-Pnp Bound L 2e-56
3k60_A223 Crystal Structure Of N-Terminal Domain Of Plasmodiu 1e-59
1uyi_A236 Human Hsp90-Alpha With 8-(2,5-Dimethoxy-Benzyl)-2-F 1e-59
2o1w_A506 Structure Of N-Terminal Plus Middle Domains (N+m) O 2e-59
2o1w_A506 Structure Of N-Terminal Plus Middle Domains (N+m) O 2e-56
3hhu_A224 Human Heat-Shock Protein 90 (Hsp90) In Complex With 2e-59
2jjc_A218 Hsp90 Alpha Atpase Domain With Bound Small Molecule 2e-59
3d0b_A232 Crystal Structure Of Benzamide Tetrahydro-4h-Carbaz 2e-59
2xdu_A236 Structre Of Hsp90 With Small Molecule Inhibitor Bou 2e-59
3qdd_A237 Hsp90a N-Terminal Domain In Complex With Biib021 Le 2e-59
3bm9_A226 Discovery Of Benzisoxazoles As Potent Inhibitors Of 2e-59
2bsm_A235 Novel, Potent Small Molecule Inhibitors Of The Mole 2e-59
1uy6_A236 Human Hsp90-Alpha With 9-Butyl-8-(3,4,5-Trimethoxy- 2e-59
2ye7_A252 Hsp90 Inhibitors And Drugs From Fragment And Virtua 2e-59
2yi0_A229 Structural Characterization Of 5-Aryl-4-(5-Substitu 2e-59
2fwy_A256 Structure Of Human Hsp90-Alpha Bound To The Potent 2e-59
1osf_A215 Human Hsp90 In Complex With 17-desmethoxy-17-n,n- D 2e-59
3k98_A232 Hsp90 N-Terminal Domain In Complex With (1r)-2-(5-C 2e-59
3eko_A226 Dihydroxylphenyl Amides As Inhibitors Of The Hsp90 2e-59
3inw_A228 Hsp90 N-Terminal Domain With Pochoxime A Length = 2 2e-59
3b24_A229 Hsp90 Alpha N-Terminal Domain In Complex With An Am 2e-59
2yjw_A209 Tricyclic Series Of Hsp90 Inhibitors Length = 209 2e-59
2qfo_A207 Hsp90 Complexed With A143571 And A516383 Length = 2 3e-59
4egh_A232 Hsp90-Alpha Atpase Domain In Complex With (4-Hydrox 3e-59
3tuh_A209 Crystal Structure Of The N-Terminal Domain Of An Hs 3e-59
2ye2_A252 Hsp90 Inhibitors And Drugs From Fragment And Virtua 3e-59
4awo_A230 Complex Of Hsp90 Atpase Domain With Tropane Derived 3e-59
3r4m_A228 Optimization Of Potent, Selective, And Orally Bioav 3e-59
3k97_A251 Hsp90 N-Terminal Domain In Complex With 4-Chloro-6- 3e-59
4eeh_A229 Hsp90 Alpha N-Terminal Domain In Complex With An In 3e-59
2ccs_A236 Human Hsp90 With 4-Chloro-6-(4-Piperazin-1-Yl-1h-Py 4e-59
2qf6_A207 Hsp90 Complexed With A56322 Length = 207 5e-59
1byq_A228 Hsp90 N-Terminal Domain Bound To Adp-Mg Length = 22 5e-59
2k5b_A210 Human Cdc37-Hsp90 Docking Model Based On Nmr Length 6e-59
2cg9_A 677 Crystal Structure Of An Hsp90-Sba1 Closed Chaperone 6e-59
2cg9_A 677 Crystal Structure Of An Hsp90-Sba1 Closed Chaperone 1e-46
1yc1_A264 Crystal Structures Of Human Hsp90alpha Complexed Wi 8e-59
2xcm_A214 Complex Of Hsp90 N-Terminal, Sgt1 Cs And Rar1 Chord 8e-59
1ah8_A220 Structure Of The Orthorhombic Form Of The N-Termina 1e-58
1a4h_A230 Structure Of The N-Terminal Domain Of The Yeast Hsp 1e-58
2bre_A219 Structure Of A Hsp90 Inhibitor Bound To The N-Termi 1e-58
1us7_A214 Complex Of Hsp90 And P50 Length = 214 1e-58
2yee_A252 Hsp90 Inhibitors And Drugs From Fragment And Virtua 1e-58
2xx2_A214 Macrolactone Inhibitor Bound To Hsp90 N-Term Length 1e-58
1am1_A213 Atp Binding Site In The Hsp90 Molecular Chaperone L 1e-58
1zw9_A240 Yeast Hsp82 In Complex With The Novel Hsp90 Inhibit 1e-58
2cgf_A225 A Radicicol Analogue Bound To The Atp Binding Site 1e-58
2jki_A223 Complex Of Hsp90 N-terminal And Sgt1 Cs Domain Leng 2e-58
1bgq_A225 Radicicol Bound To The Atp Binding Site Of The N-Te 2e-58
2wep_A220 Yeast Hsp90 N-Terminal Domain Li-Iv Mutant With Adp 3e-58
1uym_A220 Human Hsp90-Beta With Pu3 (9-Butyl-8(3,4,5-Trimetho 5e-58
3nmq_A239 Hsp90b N-Terminal Domain In Complex With Ec44, A Py 7e-58
2yge_A220 E88g-n92l Mutant Of N-term Hsp90 Complexed With Gel 7e-58
2ygf_A220 L89v, L93i And V136m Mutant Of N-term Hsp90 Complex 1e-57
3c0e_A240 Yeast Hsp82 N-Terminal Domain: Effects Of Mutants 9 1e-57
2yga_A220 E88g-n92l Mutant Of N-term Hsp90 Complexed With Gel 3e-57
3h80_A231 Crystal Structure Of The Amino-Terminal Domain Of H 3e-57
2o1t_A 450 Structure Of Middle Plus C-Terminal Domains (M+c) O 1e-55
4gqt_A227 N-Terminal Domain Of C. Elegans Hsp90 Length = 227 2e-54
3opd_A231 Crystal Structure Of The N-Terminal Domain Of An Hs 3e-54
3o6o_A214 Crystal Structure Of The N-Terminal Domain Of An Hs 3e-54
2akp_A186 Hsp90 Delta24-n210 Mutant Length = 186 3e-49
3q6m_A 448 Crystal Structure Of Human Mc-Hsp90 In C2221 Space 5e-48
3hjc_A 444 Crystal Structure Of The Carboxy-Terminal Domain Of 6e-46
3pry_A268 Crystal Structure Of The Middle Domain Of Human Hsp 1e-45
2cge_A 405 Crystal Structure Of An Hsp90-Sba1 Closed Chaperone 2e-45
1hk7_A288 Middle Domain Of Hsp90 Length = 288 3e-45
1usv_A260 The Structure Of The Complex Between Aha1 And Hsp90 4e-45
1usu_A260 The Structure Of The Complex Between Aha1 And Hsp90 5e-45
3ied_A272 Crystal Structure Of N-Terminal Domain Of Plasmodiu 3e-42
2iop_A 624 Crystal Structure Of Full-Length Htpg, The Escheric 5e-41
2iop_A 624 Crystal Structure Of Full-Length Htpg, The Escheric 5e-40
1y4s_A559 Conformation Rearrangement Of Heat Shock Protein 90 5e-41
1y4s_A 559 Conformation Rearrangement Of Heat Shock Protein 90 3e-40
2ior_A235 Crystal Structure Of The N-Terminal Domain Of Htpg, 7e-41
2gq0_A303 Crystal Structure Of The Middle Domain Of Htpg, The 4e-39
1y6z_A263 Middle Domain Of Plasmodium Falciparum Putative Hea 4e-37
>pdb|3PEH|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 From Plasmodium Falciparum, Pfl1070c In The Presence Of A Thienopyrimidine Derivative Length = 281 Back     alignment and structure 
Iteration: 1

 Score =  236 bits (602), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 123/207 (59%), Positives = 150/207 (72%), Gaps = 3/207 (1%)
Query: 78  EKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTK 137
           E  ++Q EV+RLMDII+NSLY+ K++FLRELISNA+DAL+KIRFLSL+D+ VLGE    K
Sbjct: 24  ESHQYQTEVTRLMDIIVNSLYTQKEVFLRELISNAADALEKIRFLSLSDESVLGE--EKK 81
Query: 138 LEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSG-DLNLIGQF 196
           LEI+I  +KEK ILSI D GIGMTK DLI NLGTIAKSGTS F+E +  SG D++LIGQF
Sbjct: 82  LEIRISANKEKNILSITDTGIGMTKVDLINNLGTIAKSGTSNFLEAISKSGGDMSLIGQF 141
Query: 197 GVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIRLHLRDE 256
           GVGFYS +LVAD V V +K+NDD+QY+WES AD  F I +D     L RGT I LHL+++
Sbjct: 142 GVGFYSAFLVADKVIVYTKNNDDEQYIWESTADAKFTIYKDPRGATLKRGTRISLHLKED 201
Query: 257 AGXXXXXXXXXXXXXXXXXFINFPIYI 283
           A                  FI FPIY+
Sbjct: 202 ATNLLNDKKLMDLISKYSQFIQFPIYL 228
>pdb|1QY5|A Chain A, Crystal Structure Of The N-Domain Of The Er Hsp90 Chaperone Grp94 In Complex With The Specific Ligand Neca Length = 269 Back     alignment and structure
>pdb|1U2O|A Chain A, Crystal Structure Of The N-Domain Of Grp94 Lacking The Charged Domain In Complex With Neca Length = 236 Back     alignment and structure
>pdb|1U0Y|A Chain A, N-Domain Of Grp94, With The Charged Domain, In Complex With The Novel Ligand N-Propyl Carboxyamido Adenosine Length = 273 Back     alignment and structure
>pdb|3FT5|A Chain A, Structure Of Hsp90 Bound With A Novel Fragment Length = 249 Back     alignment and structure
>pdb|2XJG|A Chain A, Structure Of Hsp90 With Small Molecule Inhibitor Bound Length = 249 Back     alignment and structure
>pdb|2XJJ|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound Length = 249 Back     alignment and structure
>pdb|2ESA|A Chain A, Grp94 N-Terminal Domain Bound To Geldanamycin: Effects Of Mutants 168- 169 Ks-Aa Length = 236 Back     alignment and structure
>pdb|2O1U|A Chain A, Structure Of Full Length Grp94 With Amp-Pnp Bound Length = 666 Back     alignment and structure
>pdb|2O1U|A Chain A, Structure Of Full Length Grp94 With Amp-Pnp Bound Length = 666 Back     alignment and structure
>pdb|3K60|A Chain A, Crystal Structure Of N-Terminal Domain Of Plasmodium Falciparum Hsp90 (Pf07_0029) Bound To Adp Length = 223 Back     alignment and structure
>pdb|1UYI|A Chain A, Human Hsp90-Alpha With 8-(2,5-Dimethoxy-Benzyl)-2-Fluoro-9- Pent-9h-Purin-6-Ylamine Length = 236 Back     alignment and structure
>pdb|2O1W|A Chain A, Structure Of N-Terminal Plus Middle Domains (N+m) Of Grp94 Length = 506 Back     alignment and structure
>pdb|2O1W|A Chain A, Structure Of N-Terminal Plus Middle Domains (N+m) Of Grp94 Length = 506 Back     alignment and structure
>pdb|3HHU|A Chain A, Human Heat-Shock Protein 90 (Hsp90) In Complex With {4-[3- (2,4-Dihydroxy-5-Isopropyl-Phenyl)-5-Thioxo- 1,5-Dihydro- [1,2,4]triazol-4-Yl]-Benzyl}-Carbamic Acid Ethyl Ester {zk 2819} Length = 224 Back     alignment and structure
>pdb|2JJC|A Chain A, Hsp90 Alpha Atpase Domain With Bound Small Molecule Fragment Length = 218 Back     alignment and structure
>pdb|3D0B|A Chain A, Crystal Structure Of Benzamide Tetrahydro-4h-Carbazol-4-One Bound To Hsp90 Length = 232 Back     alignment and structure
>pdb|2XDU|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound Length = 236 Back     alignment and structure
>pdb|3QDD|A Chain A, Hsp90a N-Terminal Domain In Complex With Biib021 Length = 237 Back     alignment and structure
>pdb|3BM9|A Chain A, Discovery Of Benzisoxazoles As Potent Inhibitors Of Chaperone Hsp90 Length = 226 Back     alignment and structure
>pdb|2BSM|A Chain A, Novel, Potent Small Molecule Inhibitors Of The Molecular Chaperone Hsp90 Discovered Through Structure-Based Design Length = 235 Back     alignment and structure
>pdb|1UY6|A Chain A, Human Hsp90-Alpha With 9-Butyl-8-(3,4,5-Trimethoxy-Benzyl)-9h-Purin-6-Ylamine Length = 236 Back     alignment and structure
>pdb|2YE7|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual Screening Length = 252 Back     alignment and structure
>pdb|2YI0|A Chain A, Structural Characterization Of 5-Aryl-4-(5-Substituted-2-4- Dihydroxyphenyl)-1,2,3-Thiadiazole Hsp90 Inhibitors. Length = 229 Back     alignment and structure
>pdb|2FWY|A Chain A, Structure Of Human Hsp90-Alpha Bound To The Potent Water Soluble Inhibitor Pu-H64 Length = 256 Back     alignment and structure
>pdb|1OSF|A Chain A, Human Hsp90 In Complex With 17-desmethoxy-17-n,n- Dimethylaminoethylamino-geldanamycin Length = 215 Back     alignment and structure
>pdb|3K98|A Chain A, Hsp90 N-Terminal Domain In Complex With (1r)-2-(5-Chloro-2, 4-Dihydroxybenzoyl)-N-Ethylisoindoline-1-Carboxamide Length = 232 Back     alignment and structure
>pdb|3EKO|A Chain A, Dihydroxylphenyl Amides As Inhibitors Of The Hsp90 Molecular Chaperone Length = 226 Back     alignment and structure
>pdb|3INW|A Chain A, Hsp90 N-Terminal Domain With Pochoxime A Length = 228 Back     alignment and structure
>pdb|3B24|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An Aminotriazine Fragment Molecule Length = 229 Back     alignment and structure
>pdb|2YJW|A Chain A, Tricyclic Series Of Hsp90 Inhibitors Length = 209 Back     alignment and structure
>pdb|2QFO|A Chain A, Hsp90 Complexed With A143571 And A516383 Length = 207 Back     alignment and structure
>pdb|4EGH|A Chain A, Hsp90-Alpha Atpase Domain In Complex With (4-Hydroxyphenyl)morpholin- 4-Yl Methanone Length = 232 Back     alignment and structure
>pdb|3TUH|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 In The Presence Of An The Inhibitor Ganetespib Length = 209 Back     alignment and structure
>pdb|2YE2|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual Screening Length = 252 Back     alignment and structure
>pdb|4AWO|A Chain A, Complex Of Hsp90 Atpase Domain With Tropane Derived Inhibitors Length = 230 Back     alignment and structure
>pdb|3R4M|A Chain A, Optimization Of Potent, Selective, And Orally Bioavailable Pyrrolodinopyrimidine-Containing Inhibitors Of Heat Shock Protein 90. Identification Of Development Candidate 2-Amino-4-{4-Chloro-2-[2-(4- Fluoro-1h-Pyrazol-1-Yl)ethoxy]-6-Methylphenyl}-N-(2,2- Difluoropropyl)-5,7-Dihydro-6h-Pyrrolo[3, 4-D]pyrimidine-6-Carboxamide Length = 228 Back     alignment and structure
>pdb|3K97|A Chain A, Hsp90 N-Terminal Domain In Complex With 4-Chloro-6-{[(2r)-2- (2-Methylphenyl)pyrrolidin-1-Yl]carbonyl}benzene-1, 3-Diol Length = 251 Back     alignment and structure
>pdb|4EEH|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An Inhibitor 3-(4- Hydroxy-Phenyl)-1h-Indazol-6-Ol Length = 229 Back     alignment and structure
>pdb|2CCS|A Chain A, Human Hsp90 With 4-Chloro-6-(4-Piperazin-1-Yl-1h-Pyrazol-3- Yl)-Benzene-1,2-Diol Length = 236 Back     alignment and structure
>pdb|2QF6|A Chain A, Hsp90 Complexed With A56322 Length = 207 Back     alignment and structure
>pdb|1BYQ|A Chain A, Hsp90 N-Terminal Domain Bound To Adp-Mg Length = 228 Back     alignment and structure
>pdb|2K5B|A Chain A, Human Cdc37-Hsp90 Docking Model Based On Nmr Length = 210 Back     alignment and structure
>pdb|2CG9|A Chain A, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone Complex Length = 677 Back     alignment and structure
>pdb|2CG9|A Chain A, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone Complex Length = 677 Back     alignment and structure
>pdb|1YC1|A Chain A, Crystal Structures Of Human Hsp90alpha Complexed With Dihydroxyphenylpyrazoles Length = 264 Back     alignment and structure
>pdb|2XCM|A Chain A, Complex Of Hsp90 N-Terminal, Sgt1 Cs And Rar1 Chord2 Domain Length = 214 Back     alignment and structure
>pdb|1AH8|A Chain A, Structure Of The Orthorhombic Form Of The N-Terminal Domain Of The Yeast Hsp90 Chaperone Length = 220 Back     alignment and structure
>pdb|1A4H|A Chain A, Structure Of The N-Terminal Domain Of The Yeast Hsp90 Chaperone In Complex With Geldanamycin Length = 230 Back     alignment and structure
>pdb|2BRE|A Chain A, Structure Of A Hsp90 Inhibitor Bound To The N-Terminus Of Yeast Hsp90. Length = 219 Back     alignment and structure
>pdb|1US7|A Chain A, Complex Of Hsp90 And P50 Length = 214 Back     alignment and structure
>pdb|2YEE|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual Screening Length = 252 Back     alignment and structure
>pdb|2XX2|A Chain A, Macrolactone Inhibitor Bound To Hsp90 N-Term Length = 214 Back     alignment and structure
>pdb|1AM1|A Chain A, Atp Binding Site In The Hsp90 Molecular Chaperone Length = 213 Back     alignment and structure
>pdb|1ZW9|A Chain A, Yeast Hsp82 In Complex With The Novel Hsp90 Inhibitor 8-(6-Bromo- Benzo[1, 3]dioxol-5-Ylsulfanyl)-9-(3-Isopropylamino-Propyl)- Adenine Length = 240 Back     alignment and structure
>pdb|2CGF|A Chain A, A Radicicol Analogue Bound To The Atp Binding Site Of The N- Terminal Domain Of The Yeast Hsp90 Chaperone Length = 225 Back     alignment and structure
>pdb|2JKI|A Chain A, Complex Of Hsp90 N-terminal And Sgt1 Cs Domain Length = 223 Back     alignment and structure
>pdb|1BGQ|A Chain A, Radicicol Bound To The Atp Binding Site Of The N-Terminal Domain Of The Yeast Hsp90 Chaperone Length = 225 Back     alignment and structure
>pdb|2WEP|A Chain A, Yeast Hsp90 N-Terminal Domain Li-Iv Mutant With Adp Length = 220 Back     alignment and structure
>pdb|1UYM|A Chain A, Human Hsp90-Beta With Pu3 (9-Butyl-8(3,4,5-Trimethoxy-Benzyl)-9h-Purin-6-Ylamine) Length = 220 Back     alignment and structure
>pdb|3NMQ|A Chain A, Hsp90b N-Terminal Domain In Complex With Ec44, A Pyrrolo-Pyrimidine Methoxypyridine Inhibitor Length = 239 Back     alignment and structure
>pdb|2YGE|A Chain A, E88g-n92l Mutant Of N-term Hsp90 Complexed With Geldanamycin Length = 220 Back     alignment and structure
>pdb|2YGF|A Chain A, L89v, L93i And V136m Mutant Of N-term Hsp90 Complexed With Geldanamycin Length = 220 Back     alignment and structure
>pdb|3C0E|A Chain A, Yeast Hsp82 N-Terminal Domain: Effects Of Mutants 98-99 Ks- Aa Length = 240 Back     alignment and structure
>pdb|2YGA|A Chain A, E88g-n92l Mutant Of N-term Hsp90 Complexed With Geldanamycin Length = 220 Back     alignment and structure
>pdb|3H80|A Chain A, Crystal Structure Of The Amino-Terminal Domain Of Hsp90 From Leishmania Major, Lmjf33.0312:m1-K213 Length = 231 Back     alignment and structure
>pdb|2O1T|A Chain A, Structure Of Middle Plus C-Terminal Domains (M+c) Of Grp94 Length = 450 Back     alignment and structure
>pdb|4GQT|A Chain A, N-Terminal Domain Of C. Elegans Hsp90 Length = 227 Back     alignment and structure
>pdb|3OPD|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 From Trypanosoma Brucei, Tb10.26.1080 In The Presence Of A Benzamide Derivative Length = 231 Back     alignment and structure
>pdb|3O6O|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 From Trypanosoma Brucei, Tb10.26.1080 In The Presence Of An The Inhibitor Biib021 Length = 214 Back     alignment and structure
>pdb|2AKP|A Chain A, Hsp90 Delta24-n210 Mutant Length = 186 Back     alignment and structure
>pdb|3Q6M|A Chain A, Crystal Structure Of Human Mc-Hsp90 In C2221 Space Group Length = 448 Back     alignment and structure
>pdb|3HJC|A Chain A, Crystal Structure Of The Carboxy-Terminal Domain Of Hsp90 From Leishmania Major, Lmjf33.0312 Length = 444 Back     alignment and structure
>pdb|3PRY|A Chain A, Crystal Structure Of The Middle Domain Of Human Hsp90-Beta Refined At 2.3 A Resolution Length = 268 Back     alignment and structure
>pdb|2CGE|A Chain A, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone Complex Length = 405 Back     alignment and structure
>pdb|1HK7|A Chain A, Middle Domain Of Hsp90 Length = 288 Back     alignment and structure
>pdb|1USV|A Chain A, The Structure Of The Complex Between Aha1 And Hsp90 Length = 260 Back     alignment and structure
>pdb|1USU|A Chain A, The Structure Of The Complex Between Aha1 And Hsp90 Length = 260 Back     alignment and structure
>pdb|3IED|A Chain A, Crystal Structure Of N-Terminal Domain Of Plasmodium Falciparum Hsp90 (Pf14_0417) In Complex With Amppn Length = 272 Back     alignment and structure
>pdb|2IOP|A Chain A, Crystal Structure Of Full-Length Htpg, The Escherichia Coli Hsp90, Bound To Adp Length = 624 Back     alignment and structure
>pdb|2IOP|A Chain A, Crystal Structure Of Full-Length Htpg, The Escherichia Coli Hsp90, Bound To Adp Length = 624 Back     alignment and structure
>pdb|1Y4S|A Chain A, Conformation Rearrangement Of Heat Shock Protein 90 Upon Adp Binding Length = 559 Back     alignment and structure
>pdb|1Y4S|A Chain A, Conformation Rearrangement Of Heat Shock Protein 90 Upon Adp Binding Length = 559 Back     alignment and structure
>pdb|2IOR|A Chain A, Crystal Structure Of The N-Terminal Domain Of Htpg, The Escherichia Coli Hsp90, Bound To Adp Length = 235 Back     alignment and structure
>pdb|2GQ0|A Chain A, Crystal Structure Of The Middle Domain Of Htpg, The E. Coli Hsp90 Length = 303 Back     alignment and structure
>pdb|1Y6Z|A Chain A, Middle Domain Of Plasmodium Falciparum Putative Heat Shock Protein Pf14_0417 Length = 263 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query584
2cg9_A 677 ATP-dependent molecular chaperone HSP82; chaperone 100.0
2o1u_A 666 Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, 100.0
1y4s_A559 Chaperone protein HTPG; HSP90, molecular chaperone 100.0
2ioq_A 624 Chaperone protein HTPG; heat shock protein, HSP90; 100.0
3pry_A268 Heat shock protein HSP 90-beta; structural genomic 100.0
1y6z_A263 Heat shock protein, putative; chaperone, structura 100.0
1usu_A260 Heat shock protein HSP82; chaperone/complex, chape 100.0
1hk7_A288 Heat shock protein HSP82; ATPase, chaperone; 2.5A 100.0
3hjc_A 444 Heat shock protein 83-1; sleeping sickness, struct 100.0
2gq0_A303 Chaperone protein HTPG; molecular chaperone, HSP90 100.0
3peh_A281 Endoplasmin homolog; structural genomics, structur 100.0
3q6m_A 448 Heat shock protein HSP 90-alpha; three domains, tr 100.0
2cge_A 405 ATP-dependent molecular chaperone HSP82; chaperone 100.0
1qy5_A269 Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: N 100.0
3ied_A272 Heat shock protein; HSP90, chaperone, structural g 100.0
3nmq_A239 Heat shock protein HSP 90-beta; ATPase, chaperone- 100.0
3o0i_A256 HSP90AA1 protein; HSP90 heat-shock proteins, chape 100.0
3t0h_A228 Heat shock protein HSP 90-alpha; chaperone, ATPase 100.0
2gqp_A236 Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, 100.0
2wer_A220 ATP-dependent molecular chaperone HSP82; ATPase, A 100.0
1yc1_A264 HSP 86, heat shock protein HSP 90-alpha; cell-cycl 100.0
2ior_A235 Chaperone protein HTPG; heat shock protein, HSP90; 100.0
1b63_A333 MUTL; DNA mismatch repair, ATPase; HET: ANP; 1.90A 99.72
1h7s_A365 PMS1 protein homolog 2; DNA repair, GHL ATPase, mi 99.55
3h4l_A367 DNA mismatch repair protein PMS1; ATP binding, DNA 99.45
3na3_A348 DNA mismatch repair protein MLH1; MUTL protein hom 99.29
1mu5_A471 Type II DNA topoisomerase VI subunit B; GHKL ATPas 98.91
3fv5_A201 DNA topoisomerase 4 subunit B; topoisomerase IV B 98.9
2zbk_B530 Type 2 DNA topoisomerase 6 subunit B; DNA binding 98.82
1kij_A390 DNA gyrase subunit B; topoisomerase, gyrase B-coum 98.75
2q2e_B 621 Type 2 DNA topoisomerase 6 subunit B; DNA-binding, 98.59
1s16_A390 Topoisomerase IV subunit B; two-domain protein com 98.56
1ei1_A391 DNA gyrase B, GYRB; ATPase domain, dimer, isomeras 98.4
4duh_A220 DNA gyrase subunit B; structure-based drug design, 98.38
3cwv_A369 DNA gyrase, B subunit, truncated; structural genom 98.33
4emv_A226 DNA topoisomerase IV, B subunit; protein-inhibitor 98.3
1zxm_A400 TOPO IIA ATPase, DNA topoisomerase II, alpha isozy 98.3
3lnu_A408 Topoisomerase IV subunit B; PARE, ATP-binding, nuc 97.99
3ttz_A198 DNA gyrase subunit B; protein-inhibitor complex, A 97.81
1pvg_A418 DNA topoisomerase II; GHKL ATPase domain; HET: DNA 97.65
4ew8_A268 Sensor protein DIVL; signal transduction, two-comp 97.3
1th8_A145 Anti-sigma F factor; SPOIIAB, SPOIIAA, anti-ANTI-s 97.26
3jz3_A222 Sensor protein QSEC; helix-turn-helix, kinase doma 97.15
2btz_A394 Pyruvate dehydrogenase kinase isoenzyme 2; GHKL mo 97.11
2e0a_A394 Pyruvate dehydrogenase kinase isozyme 4; PDK4, ATP 97.05
1y8o_A419 [pyruvate dehydrogenase [lipoamide]] kinase isozy; 96.94
3d36_A244 Sporulation kinase B; GHKL ATPase, four helix bund 96.7
1id0_A152 PHOQ histidine kinase; PHOQ/PHOP, signal transduct 96.61
3a0y_A152 Sensor protein; ATP-LID, kinase, phosphoprotein, t 96.59
2q8g_A407 [pyruvate dehydrogenase [lipoamide]] kinase isozy; 96.58
1b3q_A379 Protein (chemotaxis protein CHEA); histine kinase, 96.52
4gfh_A 1177 DNA topoisomerase 2; topoisomerase, protein-DNA co 96.32
3ehg_A128 Sensor kinase (YOCF protein); GHL ATPase domain, t 96.24
1ysr_A150 Sensor-type histidine kinase PRRB; ATP-binding dom 96.15
3ehh_A218 Sensor kinase (YOCF protein); four-helix bundle, G 96.13
1i58_A189 Chemotaxis protein CHEA; beta-alpha sandwich, sign 96.1
3sl2_A177 Sensor histidine kinase YYCG; ATP binding, intact 96.07
2c2a_A258 Sensor histidine kinase; phosphotransfer, PHOQ, se 96.04
1r62_A160 Nitrogen regulation protein NR(II); PII, histidine 95.81
3zxq_A124 Hypoxia sensor histidine kinase response regulato; 95.76
3zxo_A129 Redox sensor histidine kinase response regulator; 95.52
1gkz_A388 [3-methyl-2-oxobutanoate dehydrogenase [lipoamide] 95.04
3a0r_A349 Sensor protein; four helix bundle, PAS fold, kinas 94.98
1bxd_A161 ENVZ(290-450), protein (osmolarity sensor protein 94.88
4fpp_A247 Phosphotransferase; four helix bundle, bergerat fo 89.99
>2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae} Back     alignment and structure
Probab=100.00  E-value=3.8e-124  Score=1048.34  Aligned_cols=479  Identities=52%  Similarity=0.868  Sum_probs=401.0

Q ss_pred             ccceeeeechhchHhHHhhcCCCCchhHHHHhhhcHHHHHHHHHhhhccCccccCCCCCCccEEEEEEcCCccEEEEEEC
Q 007926           77 AEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDR  156 (584)
Q Consensus        77 ~e~~~Fqadv~rLl~lL~~sLYs~~~vfLRELIqNA~DA~~k~R~~sltd~~~~g~~~~~~l~I~I~~d~~~~~L~I~DN  156 (584)
                      .|+|.||||+++||+||+++||||+++|||||||||+||++|+|+.++++|+++  ...+++.|+|.+++++++|+|+||
T Consensus         3 ~e~~~Fqae~~~Ll~li~~sLYsnkeifLRELIsNA~DA~~k~r~~~ltd~~~~--~~~~~~~I~I~~d~~~~~I~I~Dn   80 (677)
T 2cg9_A            3 SETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQL--ETEPDLFIRITPKPEQKVLEIRDS   80 (677)
T ss_dssp             CEEEECCCCHHHHHHHHHHSCCSCTTHHHHHHHHHHHHHHHHHHHHTSSCTTTT--TTCCCCCEEEEEEGGGTEEEEEEC
T ss_pred             ccceehhhhHHHHHHHHHHhCCCCchHHHHHHhhCHHHHHHHHHHHhccChhhc--cCCCCcEEEEEEeCCCCEEEEEEC
Confidence            489999999999999999999999999999999999999999999999999987  566778999999988999999999


Q ss_pred             CCCCCHHHHHHHHHHHhccchhHHHHhhhhcCCCCccccccceeeEEEeecCEEEEEEeeCCCceeEEEecCCCceEEEe
Q 007926          157 GIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISE  236 (584)
Q Consensus       157 GiGMT~eeL~~~LgtIa~Sg~~~f~~~l~~~~~~~~IGqFGIGF~S~FmVadkV~V~Sk~~~~~~~~W~s~~~~~f~I~~  236 (584)
                      |+|||++||.++|++||+||+++|+++++.+.+...||||||||||+||||++|+|+|+++++.++.|+++|++.|+|.+
T Consensus        81 GiGMt~edl~~~l~tIA~Sgt~~f~~kl~~~~d~~~IGqFGvGFySaf~vadkV~V~Sk~~~~~~~~W~s~g~~~~ti~~  160 (677)
T 2cg9_A           81 GIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGVGFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTL  160 (677)
T ss_dssp             SCCCCHHHHHGGGSSSSSCTTHHHHSCCCSSCCCCCCCCTTCTTGGGGGTEEEEEEEEECTTSCEEEEEECSSSEEEEEE
T ss_pred             CCCCCHHHHHHHHHhHhccccHHHHHhhhcccchhhcCCCCchhHHHhhcCcEEEEEEccCCCceEEEEEcCCceEEEee
Confidence            99999999999999999999999998887656778999999999999999999999999998789999999999999998


Q ss_pred             CCCCCCCCCCcEEEEEeccccccccChHHHHHHHHHHhCCCCcceEeeecceeeccCCCCCCCCchH-HHHhhhhhhhcc
Q 007926          237 DTWNEPLGRGTEIRLHLRDEAGEYLEESKLKELVKKYSEFINFPIYIWASKEVDVDVPTDEDDSSDE-EEKAEKEEETEK  315 (584)
Q Consensus       237 ~~~~~~~~~GT~I~L~Lk~d~~e~l~~~~lk~lvkkys~fi~~PI~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  315 (584)
                      ++.+...++||+|+|||++++.+||+.++|+++|++||+||+|||+++..++.++++++++++++++ .++.+++.++++
T Consensus       161 ~~~~~~~~~GT~I~L~Lk~d~~e~l~~~~i~~lvkkys~fi~~PI~l~~~k~~~~~~~~~e~~~~~~~~~~e~~~~~~~~  240 (677)
T 2cg9_A          161 DEVNERIGRGTILRLFLKDDQLEYLEEKRIKEVIKRHSEFVAYPIQLVVTKEVEKEVPIPEEEKKDEEKKDEEKKDEDDK  240 (677)
T ss_dssp             CCSSCCCSSEEEEEEEECTTGGGGGCHHHHHHHHHHHSTTCSSCEEECCCCCCCCC------------------------
T ss_pred             cCCCCCCCCCeEEEEEEcchhhccccHHHHHHHHHHHHhhCCCCeEEeeccccccCcCcchhhhcccccccccccccccc
Confidence            6433466899999999999999999999999999999999999999987665544443322110000 000000001112


Q ss_pred             ccCCCcccccccccCCCcccceeccceeEEecccCcccccCCCCCCHHHHHHHHHHhhcCCCCCCCceeeeeecccceee
Q 007926          316 SESESEDEDEDSEKKPKTKTVKETTFEWELLNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEF  395 (584)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~k~v~~~~~~we~iN~~~piW~r~~~~vt~eey~~Fyk~l~~~~~~~~PL~~~hf~~eg~v~f  395 (584)
                      +.++ +++++++++++++|++++++++|++||+++|||+|+|++||+|||.+|||+++++|  ++||+|+||++||+++|
T Consensus       241 ~~~~-~~~~~~~~~~~~~k~~~~~~~e~e~iN~~~plW~r~~~eit~eeY~~FYk~l~~d~--~~pl~~~H~~veg~~~~  317 (677)
T 2cg9_A          241 KPKL-EEVDEEEEKKPKTKKVKEEVQEIEELNKTKPLWTRNPSDITQEEYNAFYKSISNDW--EDPLYVKHFSVEGQLEF  317 (677)
T ss_dssp             ----------------------CCCCCBCCCCCCCCTTSSCGGGCCTTTHHHHHHHHTTCC--SCCSEEEEEEECSSSCE
T ss_pred             cccc-ccccchhhhcccccccccccccceecccCCCCcccCcccCCHHHHHHHHHHhcCCC--CCchheEEecccccceE
Confidence            2222 22121111345678888888999999999999999999999999999999999999  99999999999999999


Q ss_pred             EEEEEeCCCCCcchhhhhhcccccCeeEEeeeeeeccccchhhhhhhhcccccccCCCcCCccchhhhhcchHHHHHHHH
Q 007926          396 KAVLFVPPKAPHDLYESYYNTNKANLKLYVRRVFISDEFDELLPKYLNFLKGLVDSDTLPLNVSREMLQQHSSLKTIKKK  475 (584)
Q Consensus       396 ~~llfiP~~~p~~~~~~~~~~~~~~ikLYvrrVfI~d~~~~llP~yl~FvkGVVDSddLpLNvSRE~lQ~~~~l~~Irk~  475 (584)
                      +||||||+++|+|+|++  ...+++|+||||||||+|+|++|||+||+||||||||+|||||||||+||+|++|++||+.
T Consensus       318 ~~lLyiP~~ap~d~~~~--~~~~~~ikLYv~rVfI~d~~~~llP~yL~FvkGVVDS~DLpLNvSRE~LQ~~~~lk~I~~~  395 (677)
T 2cg9_A          318 RAILFIPKRAPFDLFES--KKKKNNIKLYVRRVFITDEAEDLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIRKN  395 (677)
T ss_dssp             EEEEEECSSCCC-----------CCSEEEETTEEEEECSTTTSCGGGTTCEEEEEESSCCCCBTTTBCCCHHHHHHHHHH
T ss_pred             EEEEEEcCCCchhhhhh--hhccCCeEEEEeeeEeecChhhhchHHHHHheeecccCCCCcccCHHHhccCHHHHHHHHH
Confidence            99999999999999974  2457899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCcccccccCCCccchhHHHHHHHHhchhceeeeccChhhHHHHhccceeeeccCCCc
Q 007926          476 LIRKALDMIRKIAEEDPDESTGKDKKDVEKFSDDDDKKGQYTKFWNEFGKSIKLGIIEDAANRNRLAKLLRFERYLFYSL  555 (584)
Q Consensus       476 lv~k~l~~l~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~y~kf~~~fg~~lK~G~~eD~~nr~~la~Llrf~ss~~~~~  555 (584)
                      |++|+++||.+||++                      +++|++||++||++||+|+++|..||++|++||||+||+++..
T Consensus       396 l~kkvl~~l~~la~~----------------------~e~y~~f~~~fg~~lK~G~~eD~~nr~~l~~llrf~ss~~~~~  453 (677)
T 2cg9_A          396 IVKKLIEAFNEIAED----------------------SEQFEKFYSAFSKNIKLGVHEDTQNRAALAKLLRYNSTKSVDE  453 (677)
T ss_dssp             HHHHHHHHHHHHHSC----------------------SHHHHHHHHHHHHHHHHHHHHCSSSHHHHHTTCCBEESSCTTS
T ss_pred             HHHHHHHHHHHHHhC----------------------HHHHHHHHHHHhHHhhhhhccCHHHHHHHHhheEeeecCCCCc
Confidence            999999999999975                      3699999999999999999999999999999999999998777


Q ss_pred             cceee------------ehhhhcC------CchhHhhhhhcCccccC
Q 007926          556 NLSYE------------YFYFSRI------SLPFVSASFSHGVCTLL  584 (584)
Q Consensus       556 ~~s~~------------~~y~~~~------~~p~~~~~~~~g~~~ll  584 (584)
                      ++|++            +||++++      ++|+++++++||+|||+
T Consensus       454 ~~sL~eYv~rmke~Q~~IyY~t~~s~~~~~~sp~~E~~~~kg~EVl~  500 (677)
T 2cg9_A          454 LTSLTDYVTRMPEHQKNIYYITGESLKAVEKSPFLDALKAKNFEVLF  500 (677)
T ss_dssp             CBCSTTHHHHSCTTCCEEEEEECSCSTTTTTCGGGHHHHTTTCCEEE
T ss_pred             eeeHHHHHHhccccCceEEEEeCCCHHHHHhCcHHHHHHhCCceEEE
Confidence            88883            5777753      59999999999999985
>2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A Back     alignment and structure
>1y4s_A Chaperone protein HTPG; HSP90, molecular chaperone, ATPase; HET: ADP; 2.90A {Escherichia coli} PDB: 1y4u_A Back     alignment and structure
>2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A Back     alignment and structure
>3pry_A Heat shock protein HSP 90-beta; structural genomics, structural genomics consortium, SGC, HE protein, chaperone; 2.28A {Homo sapiens} SCOP: d.14.1.8 Back     alignment and structure
>1y6z_A Heat shock protein, putative; chaperone, structural genomics, structural genom consortium, SGC, unknown function; 1.88A {Plasmodium falciparum} Back     alignment and structure
>1usu_A Heat shock protein HSP82; chaperone/complex, chaperone, activator, HSP90; 2.15A {Saccharomyces cerevisiae} SCOP: d.14.1.8 PDB: 1usv_A Back     alignment and structure
>1hk7_A Heat shock protein HSP82; ATPase, chaperone; 2.5A {Saccharomyces cerevisiae} SCOP: d.14.1.8 Back     alignment and structure
>3hjc_A Heat shock protein 83-1; sleeping sickness, structura genomics, stress response protein, chaperone, structural GE consortium, SGC; 2.50A {Leishmania major} Back     alignment and structure
>2gq0_A Chaperone protein HTPG; molecular chaperone, HSP90, E. coli, hydrolase; 1.90A {Escherichia coli} Back     alignment and structure
>3peh_A Endoplasmin homolog; structural genomics, structural genomics consortium, SGC, HE protein, chaperone, ATP binding; HET: IBD; 2.75A {Plasmodium falciparum 3D7} PDB: 3pej_A* Back     alignment and structure
>3q6m_A Heat shock protein HSP 90-alpha; three domains, trimer of dimer, hexamer, chaperone; 3.00A {Homo sapiens} PDB: 3q6n_A Back     alignment and structure
>2cge_A ATP-dependent molecular chaperone HSP82; chaperone complex, heat shock protein, CO-chaperone, ATP-binding, heat shock; 3.0A {Saccharomyces cerevisiae} Back     alignment and structure
>1qy5_A Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: NEC; 1.75A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1qy8_A* 1qye_A* 1u0y_A* 1yt2_A* Back     alignment and structure
>3ied_A Heat shock protein; HSP90, chaperone, structural genomics, structura genomics consortium, SGC, stress response; HET: AN2; 2.01A {Plasmodium falciparum} Back     alignment and structure
>3nmq_A Heat shock protein HSP 90-beta; ATPase, chaperone-chaperone inhibitor complex; HET: 7PP; 2.20A {Homo sapiens} SCOP: d.122.1.1 Back     alignment and structure
>3o0i_A HSP90AA1 protein; HSP90 heat-shock proteins, chaperone-inhibitor complex; HET: P54; 1.47A {Homo sapiens} PDB: 2fwz_A* 2fwy_A* 2h55_A* Back     alignment and structure
>3t0h_A Heat shock protein HSP 90-alpha; chaperone, ATPase; 1.20A {Homo sapiens} SCOP: d.122.1.1 PDB: 3r4m_A 3t0z_A* 3t10_A* 3t1k_A* 3t2s_A* 1uyl_A 1uy7_A* 1uy8_A* 1uy9_A* 1uyc_A* 1uyd_A* 1uye_A* 1uyf_A* 1uyg_A* 1uyh_A* 1uyk_A* 1uy6_A 2cdd_A* 2uwd_A* 2vci_A* ... Back     alignment and structure
>2gqp_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, ligand, NECA, NPCA, adenosine; HET: PA7 PG4 1PE; 1.50A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1tc0_A* 1tbw_A* 1u0z_A* 1u2o_A* 1ysz_A* 1yt0_A* 1yt1_A* 2exl_A* 2fyp_A* 2gfd_A* 1tc6_A* 2h8m_A* 2hch_A* 2hg1_A* 3o2f_A* 2esa_A* Back     alignment and structure
>2wer_A ATP-dependent molecular chaperone HSP82; ATPase, ATP-binding, phosphoprotein, stress respo nucleotide-binding; HET: RDC; 1.60A {Saccharomyces cerevisiae} PDB: 2weq_A* 2wep_A* 1zwh_A* 1zw9_A* 2fxs_A* 3c11_A* 3c0e_A* 2yge_A* 2ygf_A* 2akp_A Back     alignment and structure
>1yc1_A HSP 86, heat shock protein HSP 90-alpha; cell-cycle, cancer, drug design, cell cycle; HET: 4BC; 1.70A {Homo sapiens} SCOP: d.122.1.1 PDB: 1yc3_A* 1yc4_A* Back     alignment and structure
>2ior_A Chaperone protein HTPG; heat shock protein, HSP90; HET: ADP; 1.65A {Escherichia coli} Back     alignment and structure
>1b63_A MUTL; DNA mismatch repair, ATPase; HET: ANP; 1.90A {Escherichia coli K12} SCOP: d.14.1.3 d.122.1.2 PDB: 1nhh_A* 1nhi_A* 1bkn_A 1nhj_A* 1b62_A* Back     alignment and structure
>1h7s_A PMS1 protein homolog 2; DNA repair, GHL ATPase, mismatch repair, HNPCC; 1.95A {Homo sapiens} SCOP: d.14.1.3 d.122.1.2 PDB: 1h7u_A* 1ea6_A* Back     alignment and structure
>3h4l_A DNA mismatch repair protein PMS1; ATP binding, DNA repair, DNA damage, nucleus, phosphop DNA binding protein, protein binding; HET: DNA ANP; 2.50A {Saccharomyces cerevisiae} Back     alignment and structure
>3na3_A DNA mismatch repair protein MLH1; MUTL protein homolog 1, DNA damag repair, structural genomics consortium, SGC, protein bindin; HET: DNA ATP; 2.50A {Homo sapiens} Back     alignment and structure
>1mu5_A Type II DNA topoisomerase VI subunit B; GHKL ATPase, helix two-turns helix; 2.00A {Sulfolobus shibatae} SCOP: a.156.1.3 d.14.1.3 d.122.1.2 PDB: 1mx0_A* 1z5b_A* 1z5a_A* 1z59_A* 1z5c_A* 2hkj_A* Back     alignment and structure
>3fv5_A DNA topoisomerase 4 subunit B; topoisomerase IV B subunit complex, antibiotic resistance, ATP-binding, nucleotide-binding; HET: DNA 1EU; 1.80A {Escherichia coli} PDB: 1s14_A* Back     alignment and structure
>2zbk_B Type 2 DNA topoisomerase 6 subunit B; DNA binding protein, decatenation, ATPase, drug design, DNA-binding, magnesium, metal-binding; HET: RDC; 3.56A {Sulfolobus shibatae} Back     alignment and structure
>1kij_A DNA gyrase subunit B; topoisomerase, gyrase B-coumarin complex, isomerase; HET: DNA NOV; 2.30A {Thermus thermophilus} SCOP: d.14.1.3 d.122.1.2 Back     alignment and structure
>2q2e_B Type 2 DNA topoisomerase 6 subunit B; DNA-binding, SPO11, ATPase; 4.00A {Methanosarcina mazei} Back     alignment and structure
>1s16_A Topoisomerase IV subunit B; two-domain protein complexed with ADPNP; HET: ANP; 2.10A {Escherichia coli} SCOP: d.14.1.3 d.122.1.2 Back     alignment and structure
>1ei1_A DNA gyrase B, GYRB; ATPase domain, dimer, isomerase; HET: DNA ANP; 2.30A {Escherichia coli} SCOP: d.14.1.3 d.122.1.2 Back     alignment and structure
>4duh_A DNA gyrase subunit B; structure-based drug design, antibacterial, DNA gyrase B, GY isomerase-isomerase inhibitor complex; HET: DNA RLI; 1.50A {Escherichia coli} PDB: 1aj6_A* 1kzn_A* 3g7e_A* Back     alignment and structure
>3cwv_A DNA gyrase, B subunit, truncated; structural genomics, unknown function, B-subunit binding, isomerase, nucleotide-binding, topoisomerase; HET: DNA; 1.95A {Myxococcus xanthus} Back     alignment and structure
>4emv_A DNA topoisomerase IV, B subunit; protein-inhibitor complex, ATP binding, structure-based drug antimicrobial, virtual screen; HET: DNA 0R9; 1.70A {Streptococcus pneumoniae GA47373} PDB: 4em7_A* Back     alignment and structure
>1zxm_A TOPO IIA ATPase, DNA topoisomerase II, alpha isozyme; GHKL nucleotide-binding fold; HET: DNA ANP; 1.87A {Homo sapiens} PDB: 1zxn_A* Back     alignment and structure
>3lnu_A Topoisomerase IV subunit B; PARE, ATP-binding, nucleotide-BI topoisomerase; 2.20A {Xanthomonas oryzae PV} PDB: 3lps_A* Back     alignment and structure
>3ttz_A DNA gyrase subunit B; protein-inhibitor complex, ATP-binding, structure-based drug antimicrobial, isomerase-isomerase inhibitor complex; HET: DNA 07N; 1.63A {Staphylococcus aureus} PDB: 3u2d_A* 3u2k_A* 3g75_A* 3g7b_A* Back     alignment and structure
>1pvg_A DNA topoisomerase II; GHKL ATPase domain; HET: DNA ANP; 1.80A {Saccharomyces cerevisiae} SCOP: d.14.1.3 d.122.1.2 PDB: 1qzr_A* Back     alignment and structure
>4ew8_A Sensor protein DIVL; signal transduction, two-component regulatory system, hiska GHKL domain, structural genomics; 2.50A {Caulobacter crescentus} Back     alignment and structure
>1th8_A Anti-sigma F factor; SPOIIAB, SPOIIAA, anti-ANTI-sigma, sporulation, serine kinase, transcription; HET: ADP; 2.40A {Geobacillus stearothermophilus} SCOP: d.122.1.3 PDB: 1thn_A* 1til_A* 1l0o_A* 1tid_A* Back     alignment and structure
>3jz3_A Sensor protein QSEC; helix-turn-helix, kinase domain, ATP-binding, cell inner MEM cell membrane, kinase, membrane, nucleotide-binding; 2.50A {Escherichia coli} Back     alignment and structure
>2btz_A Pyruvate dehydrogenase kinase isoenzyme 2; GHKL motif regulation, transferase; 2.2A {Homo sapiens} PDB: 2bu2_A* 2bu5_A* 2bu6_A* 2bu7_A* 2bu8_A* 3crk_A* 1jm6_A* 3crl_A* Back     alignment and structure
>2e0a_A Pyruvate dehydrogenase kinase isozyme 4; PDK4, ATP-binding, structural genomics, NPPSFA, NATI project on protein structural and functional analyses; HET: ANP; 1.86A {Homo sapiens} PDB: 2zdx_A* 2zdy_A* 2zkj_A* 3d2r_A* Back     alignment and structure
>1y8o_A [pyruvate dehydrogenase [lipoamide]] kinase isozy; pyruvate dehydrogenase kinase 3, lipoyl-bearing domain; HET: RED ADP; 2.48A {Homo sapiens} SCOP: a.29.5.1 d.122.1.4 PDB: 1y8n_A* 1y8p_A* 2pnr_A* 2q8i_A* Back     alignment and structure
>3d36_A Sporulation kinase B; GHKL ATPase, four helix bundle, class I two-component histidine kinase, phosphoprotein; HET: ADP; 2.03A {Geobacillus stearothermophilus} Back     alignment and structure
>1id0_A PHOQ histidine kinase; PHOQ/PHOP, signal transduction, transferase; HET: ANP; 1.60A {Escherichia coli} SCOP: d.122.1.3 PDB: 3cgz_A 3cgy_A Back     alignment and structure
>3a0y_A Sensor protein; ATP-LID, kinase, phosphoprotein, transferase, two-component regulatory system; 1.57A {Thermotoga maritima} PDB: 3a0t_A* 3a0x_A 3a0w_A 3a0z_A Back     alignment and structure
>2q8g_A [pyruvate dehydrogenase [lipoamide]] kinase isozy; GHKL ATPase/kinase family, pyruvate dehydrogenase complex, mitochondrial kinase; HET: AZX; 1.90A {Homo sapiens} PDB: 2q8f_A* 2q8h_A Back     alignment and structure
>1b3q_A Protein (chemotaxis protein CHEA); histine kinase, signal transduction, multi-domai protein, transferase; 2.60A {Thermotoga maritima} SCOP: a.30.2.1 b.40.7.1 d.122.1.3 PDB: 2ch4_A* 3ur1_A Back     alignment and structure
>4gfh_A DNA topoisomerase 2; topoisomerase, protein-DNA complex, DNA supercoiling, DNA replication; HET: DNA PTR TSP ANP; 4.41A {Saccharomyces cerevisiae} Back     alignment and structure
>3ehg_A Sensor kinase (YOCF protein); GHL ATPase domain, transferase; HET: ATP; 1.74A {Bacillus subtilis} Back     alignment and structure
>1ysr_A Sensor-type histidine kinase PRRB; ATP-binding domain, structural genomics, mycobacterium tuberculosis structural proteomics project; 1.78A {Mycobacterium tuberculosis} SCOP: d.122.1.3 PDB: 1ys3_A Back     alignment and structure
>3ehh_A Sensor kinase (YOCF protein); four-helix bundle, GHL ATPase domain, transferase; HET: MSE ADP; 2.10A {Bacillus subtilis} PDB: 3ehj_A* 3gie_A* 3gif_A* 3gig_A* 3ehf_A* Back     alignment and structure
>1i58_A Chemotaxis protein CHEA; beta-alpha sandwich, signaling protein, transferase; HET: ACP ADP; 1.60A {Thermotoga maritima} SCOP: d.122.1.3 PDB: 1i59_A* 1i5a_A* 1i5b_A* 1i5c_A* 1i5d_A* Back     alignment and structure
>3sl2_A Sensor histidine kinase YYCG; ATP binding, intact ATP, bergerat fold, TR; HET: ATP; 1.61A {Bacillus subtilis} Back     alignment and structure
>2c2a_A Sensor histidine kinase; phosphotransfer, PHOQ, selenomethionyl MAD, two-component systems, transferase; HET: ADP; 1.9A {Thermotoga maritima} SCOP: a.30.2.1 d.122.1.3 PDB: 3dge_A* Back     alignment and structure
>1r62_A Nitrogen regulation protein NR(II); PII, histidine kinase, two component system, transfera; 1.60A {Escherichia coli} SCOP: d.122.1.3 Back     alignment and structure
>3zxq_A Hypoxia sensor histidine kinase response regulato; transferase; 1.90A {Mycobacterium tuberculosis} Back     alignment and structure
>3zxo_A Redox sensor histidine kinase response regulator; transferase; HET: MSE; 1.90A {Mycobacterium tuberculosis} Back     alignment and structure
>1gkz_A [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase; transferase, mitochondrial protein kinase, potassium; HET: ADP; 2.2A {Rattus norvegicus} SCOP: a.29.5.1 d.122.1.4 PDB: 1gjv_A 1gkx_A* Back     alignment and structure
>3a0r_A Sensor protein; four helix bundle, PAS fold, kinase, phosphoprotein, transfe two-component regulatory system; 3.80A {Thermotoga maritima} Back     alignment and structure
>1bxd_A ENVZ(290-450), protein (osmolarity sensor protein (ENVZ)); histidine kinase, osmosensor, His-Asp phosphorelay system, signal transduction; HET: ANP; NMR {Escherichia coli BL21} SCOP: d.122.1.3 Back     alignment and structure
>4fpp_A Phosphotransferase; four helix bundle, bergerat fold, CCKA, CTRA, CPDR, bacterial cytoplasme; 2.20A {Caulobacter crescentus} PDB: 4fmt_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 584
d2iwxa1213 d.122.1.1 (A:2-214) HSP90 {Baker's yeast (Saccharo 5e-69
d2gqpa1227 d.122.1.1 (A:74-337) HSP90 {Dog (Canis familiaris) 2e-68
d1uyla_208 d.122.1.1 (A:) HSP90 {Human (Homo sapiens) [TaxId: 5e-64
d1usua_256 d.14.1.8 (A:) Heat shock protein hsp82 {Baker's ye 8e-47
d2hkja3219 d.122.1.2 (A:10-228) Topoisomerase VI-B subunit {A 0.001
d1h7sa2203 d.122.1.2 (A:29-231) DNA mismatch repair protein P 0.003
>d2iwxa1 d.122.1.1 (A:2-214) HSP90 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 213 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
superfamily: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
family: Heat shock protein 90, HSP90, N-terminal domain
domain: HSP90
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  220 bits (561), Expect = 5e-69
 Identities = 126/214 (58%), Positives = 169/214 (78%), Gaps = 2/214 (0%)

Query: 77  AEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNT 136
           +E FEFQAE+++LM +IIN++YSNK+IFLRELISNASDALDKIR+ SL+D + L      
Sbjct: 2   SETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLE--TEP 59

Query: 137 KLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQF 196
            L I+I    E+K+L IRD GIGMTK +LI NLGTIAKSGT AF+E +    D+++IGQF
Sbjct: 60  DLFIRITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQF 119

Query: 197 GVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIRLHLRDE 256
           GVGFYS++LVAD V+VISK NDD+QY+WES A G+F ++ D  NE +GRGT +RL L+D+
Sbjct: 120 GVGFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDD 179

Query: 257 AGEYLEESKLKELVKKYSEFINFPIYIWASKEVD 290
             EYLEE ++KE++K++SEF+ +PI +  +KEV+
Sbjct: 180 QLEYLEEKRIKEVIKRHSEFVAYPIQLVVTKEVE 213
>d2gqpa1 d.122.1.1 (A:74-337) HSP90 {Dog (Canis familiaris) [TaxId: 9615]} Length = 227 Back     information, alignment and structure
>d1uyla_ d.122.1.1 (A:) HSP90 {Human (Homo sapiens) [TaxId: 9606]} Length = 208 Back     information, alignment and structure
>d1usua_ d.14.1.8 (A:) Heat shock protein hsp82 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 256 Back     information, alignment and structure
>d2hkja3 d.122.1.2 (A:10-228) Topoisomerase VI-B subunit {Archaeon Sulfolobus shibatae [TaxId: 2286]} Length = 219 Back     information, alignment and structure
>d1h7sa2 d.122.1.2 (A:29-231) DNA mismatch repair protein PMS2 {Human (Homo sapiens) [TaxId: 9606]} Length = 203 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query584
d1usua_256 Heat shock protein hsp82 {Baker's yeast (Saccharom 100.0
d2gqpa1227 HSP90 {Dog (Canis familiaris) [TaxId: 9615]} 100.0
d2iwxa1213 HSP90 {Baker's yeast (Saccharomyces cerevisiae) [T 100.0
d1uyla_208 HSP90 {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1h7sa2203 DNA mismatch repair protein PMS2 {Human (Homo sapi 99.33
d2hkja3219 Topoisomerase VI-B subunit {Archaeon Sulfolobus sh 99.26
d1b63a2218 DNA mismatch repair protein MutL {Escherichia coli 99.12
d1pvga2239 DNA topoisomerase II {Baker's yeast (Saccharomyces 97.89
d1kija2212 DNA gyrase B {Thermus thermophilus [TaxId: 274]} 97.77
d1ei1a2219 DNA gyrase B {Escherichia coli [TaxId: 562]} 97.59
d1y8oa2125 Pyruvate dehydrogenase kinase {Human (Homo sapiens 97.53
d1gkza2193 Branched-chain alpha-ketoacid dehydrogenase kinase 97.36
d1ysra1148 Sensor-type histidine kinase PrrB {Mycobacterium t 97.11
d2c2aa2161 Sensor histidine kinase TM0853 {Thermotoga maritim 97.1
d1jm6a2190 Pyruvate dehydrogenase kinase {Rat (Rattus norvegi 97.09
d1bxda_161 Histidine kinase domain of the osmosensor EnvZ {Es 96.96
d1th8a_139 Anti-sigma factor spoIIab {Bacillus stearothermoph 96.88
d1id0a_146 Histidine kinase PhoQ domain {Escherichia coli [Ta 96.82
d1ixma_179 Sporulation response regulatory protein Spo0B {Bac 96.09
d1s14a_168 Topoisomerase IV subunit B {Escherichia coli [TaxI 95.31
d1r62a_156 Nitrogen regulation protein NtrB, C-terminal domai 91.67
>d1usua_ d.14.1.8 (A:) Heat shock protein hsp82 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Ribosomal protein S5 domain 2-like
superfamily: Ribosomal protein S5 domain 2-like
family: Hsp90 middle domain
domain: Heat shock protein hsp82
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.1e-66  Score=523.36  Aligned_cols=210  Identities=46%  Similarity=0.833  Sum_probs=189.2

Q ss_pred             cCcccccCCCCCCHHHHHHHHHHhhcCCCCCCCceeeeeecccceeeEEEEEeCCCCCcchhhhhhcccccCeeEEeeee
Q 007926          349 VKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTNKANLKLYVRRV  428 (584)
Q Consensus       349 ~~piW~r~~~~vt~eey~~Fyk~l~~~~~~~~PL~~~hf~~eg~v~f~~llfiP~~~p~~~~~~~~~~~~~~ikLYvrrV  428 (584)
                      .+|||+|+|++||+|||.+|||+++++|  ++||+|+||++||+++|+||||||+++|+++|..  ....++|+||||||
T Consensus         2 tkpiW~r~~~eit~eeY~~FYk~l~~~~--~~Pl~~iH~~~eg~~~~~~lLyiP~~~p~~~~~~--~~~~~~ikLY~~rV   77 (256)
T d1usua_           2 TKPLWTRNPSDITQEEYNAFYKSISNDW--EDPLYVKHFSVEGQLEFRAILFIPKRAPFDLFES--KKKKNNIKLYVRRV   77 (256)
T ss_dssp             CCCGGGSCGGGCCHHHHHHHHHHHHCCS--SCCSEEEEEEECSSSCEEEEEEECSSCCTTTTCC------CCEEEEETTE
T ss_pred             CCCCccCCchhCCHHHHHHHHHhhcCCc--cCCceeEEeeeeeeEEEEEEEEecccCcchhhhh--hhhcCCeEEEEEee
Confidence            5799999999999999999999999999  8999999999999999999999999999999864  24568999999999


Q ss_pred             eeccccchhhhhhhhcccccccCCCcCCccchhhhhcchHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcccccccCC
Q 007926          429 FISDEFDELLPKYLNFLKGLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKALDMIRKIAEEDPDESTGKDKKDVEKFSD  508 (584)
Q Consensus       429 fI~d~~~~llP~yl~FvkGVVDSddLpLNvSRE~lQ~~~~l~~Irk~lv~k~l~~l~~la~~~~~~~~~~~~~~~~~~~~  508 (584)
                      ||+|+|++|||+||+||||||||+|||||||||+||+|+++++|++.|++||+++|++++ +                  
T Consensus        78 fI~d~~~~llP~~L~FvkGVVDS~DlpLNVSRE~LQ~~~~l~kI~~~i~kkv~~~L~~~~-~------------------  138 (256)
T d1usua_          78 FITDEAEDLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIRKNIVKKLIEAFNEIA-E------------------  138 (256)
T ss_dssp             EEESCCTTSSCGGGTTCEEEEEESSCCSCC------CCHHHHHHHHHHHHHHHHHHHHHH-T------------------
T ss_pred             eeccchhhHHHHHHHHhhhccccccCCcccchhhhcccHHHHHHHHHHHHHHHHHHHHhh-h------------------
Confidence            999999999999999999999999999999999999999999999999999999998875 4                  


Q ss_pred             CccchhHHHHHHHHhchhceeeeccChhhHHHHhccceeeeccCCCccceee------------ehhhhcC------Cch
Q 007926          509 DDDKKGQYTKFWNEFGKSIKLGIIEDAANRNRLAKLLRFERYLFYSLNLSYE------------YFYFSRI------SLP  570 (584)
Q Consensus       509 ~~~~~~~y~kf~~~fg~~lK~G~~eD~~nr~~la~Llrf~ss~~~~~~~s~~------------~~y~~~~------~~p  570 (584)
                         ++++|.+||++||.+||+||++|..||++|++||||+||.+.+.++|++            +||+++.      ++|
T Consensus       139 ---d~eky~~fw~~fg~~lK~G~~~D~~~~e~l~~ll~f~ss~s~~e~~SL~eYvermke~Qk~IyYi~~~s~~~~~~sP  215 (256)
T d1usua_         139 ---DSEQFEKFYSAFSKNIKLGVHEDTQNRAALAKLLRYNSTKSVDELTSLTDYVTRMPEHQKNIYYITGESLKSVEKSP  215 (256)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHCTTTHHHHHTTCEEEETTEEEEEEEHHHHHHTSCTTCCEEEEEECSSHHHHHTCT
T ss_pred             ---CHHHHHHHHHHHhHHHhhhccccHHHHHHHHHhhhhhccCCCcceeeHHHHHhhccccccceEEEecCCHHHHHcCH
Confidence               5679999999999999999999999999999999999999888888884            5776654      599


Q ss_pred             hHhhhhhcCccccC
Q 007926          571 FVSASFSHGVCTLL  584 (584)
Q Consensus       571 ~~~~~~~~g~~~ll  584 (584)
                      +++++++||+|||+
T Consensus       216 ~lE~~k~kg~EVL~  229 (256)
T d1usua_         216 FLDALKAKNFEVLF  229 (256)
T ss_dssp             THHHHHHTTCCEEE
T ss_pred             HHHHHHHCCCEEEE
Confidence            99999999999996
>d2gqpa1 d.122.1.1 (A:74-337) HSP90 {Dog (Canis familiaris) [TaxId: 9615]} Back     information, alignment and structure
>d2iwxa1 d.122.1.1 (A:2-214) HSP90 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1uyla_ d.122.1.1 (A:) HSP90 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1h7sa2 d.122.1.2 (A:29-231) DNA mismatch repair protein PMS2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2hkja3 d.122.1.2 (A:10-228) Topoisomerase VI-B subunit {Archaeon Sulfolobus shibatae [TaxId: 2286]} Back     information, alignment and structure
>d1pvga2 d.122.1.2 (A:7-245) DNA topoisomerase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1kija2 d.122.1.2 (A:9-220) DNA gyrase B {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ei1a2 d.122.1.2 (A:2-220) DNA gyrase B {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1y8oa2 d.122.1.4 (A:177-301) Pyruvate dehydrogenase kinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gkza2 d.122.1.4 (A:186-378) Branched-chain alpha-ketoacid dehydrogenase kinase (BCK) {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1ysra1 d.122.1.3 (A:299-446) Sensor-type histidine kinase PrrB {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2c2aa2 d.122.1.3 (A:321-481) Sensor histidine kinase TM0853 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1jm6a2 d.122.1.4 (A:1177-1366) Pyruvate dehydrogenase kinase {Rat (Rattus norvegicus), isozyme 2 [TaxId: 10116]} Back     information, alignment and structure
>d1bxda_ d.122.1.3 (A:) Histidine kinase domain of the osmosensor EnvZ {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1th8a_ d.122.1.3 (A:) Anti-sigma factor spoIIab {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1id0a_ d.122.1.3 (A:) Histidine kinase PhoQ domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ixma_ d.123.1.1 (A:) Sporulation response regulatory protein Spo0B {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1s14a_ d.122.1.2 (A:) Topoisomerase IV subunit B {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1r62a_ d.122.1.3 (A:) Nitrogen regulation protein NtrB, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure