Citrus Sinensis ID: 007935
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 584 | 2.2.26 [Sep-21-2011] | |||||||
| C0LGS3 | 768 | Probable LRR receptor-lik | no | no | 0.962 | 0.731 | 0.289 | 2e-63 | |
| Q9M9C5 | 670 | Probable leucine-rich rep | no | no | 0.922 | 0.804 | 0.325 | 6e-61 | |
| Q9C9N5 | 685 | Probable inactive leucine | no | no | 0.703 | 0.6 | 0.331 | 1e-60 | |
| O48788 | 658 | Probable inactive recepto | no | no | 0.890 | 0.790 | 0.325 | 3e-58 | |
| Q94C77 | 757 | Receptor protein kinase-l | no | no | 0.712 | 0.549 | 0.335 | 5e-57 | |
| Q9M8T0 | 627 | Probable inactive recepto | no | no | 0.931 | 0.867 | 0.309 | 8e-53 | |
| Q9LVM0 | 654 | Probable inactive recepto | no | no | 0.909 | 0.811 | 0.305 | 1e-52 | |
| Q9C9Y8 | 640 | Probable inactive recepto | no | no | 0.936 | 0.854 | 0.299 | 9e-52 | |
| Q9FHK7 | 640 | Probable leucine-rich rep | no | no | 0.914 | 0.834 | 0.302 | 5e-51 | |
| Q9SCT4 | 836 | Probably inactive leucine | no | no | 0.851 | 0.594 | 0.304 | 1e-50 |
| >sp|C0LGS3|Y4372_ARATH Probable LRR receptor-like serine/threonine-protein kinase At4g37250 OS=Arabidopsis thaliana GN=At4g37250 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 244 bits (622), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 221/764 (28%), Positives = 322/764 (42%), Gaps = 202/764 (26%)
Query: 2 LLPLLFFALLLLFPAPLCFSLNQDGLALLALKAAIAQDPTRALDSWSESDSTPCHWSGIH 61
L+ ++FF + + +LN DGL L+ K+++ DP L +W+ +PC W GI
Sbjct: 5 LISVIFFFFCSVLSSS---ALNSDGLVLMKFKSSVLVDPLSLLQTWNYKHESPCSWRGIS 61
Query: 62 CIRN-RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDL 120
C + +V +L LPN L G +PS+LG L +L L L++N+F+ P+P + FNA L +LDL
Sbjct: 62 CNNDSKVLTLSLPNSQLLGSIPSDLGSLLTLQSLDLSNNSFNGPLPVSFFNARELRFLDL 121
Query: 121 AHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALT---------------- 164
+ N G IP I L NL L+LS N L G LP L LR LT
Sbjct: 122 SSNMISGEIPSAIGDLHNLLTLNLSDNALAGKLPTNLASLRNLTVVSLENNYFSGEIPGG 181
Query: 165 ---------------------------GTLNLSFNQFSGQIPEMYG-HFPVMVSLDLRNN 196
LN+SFNQ SG+IP G +FP V++DL N
Sbjct: 182 WRVVEFLDLSSNLINGSLPPDFGGYSLQYLNVSFNQISGEIPPEIGVNFPRNVTVDLSFN 241
Query: 197 NLSGEIPQVGSLLNQGPTAFSGNPGLCGFPLQSPCPEPENPKV-------HANPEVEDGP 249
NL+G IP LNQ FSGNPGLCG P ++PC P +P + + P + P
Sbjct: 242 NLTGPIPDSPVFLNQESNFFSGNPGLCGEPTRNPCLIPSSPSIVSEADVPTSTPAIAAIP 301
Query: 250 Q----NPKNTNFGYSGDVKDR-GRNGSVVVSVISGVSVVVGVVSVS-VWLFRRKRR--AR 301
NP D R G V++ ++ G +G+++V ++++R K+
Sbjct: 302 NTIGSNPVTDPNSQQTDPNPRTGLRPGVIIGIVVGDIAGIGILAVIFLYIYRCKKNKIVD 361
Query: 302 EGKMGKEEKTNDAVLVTD------------------------------------------ 319
K+ D + ++
Sbjct: 362 NNNNDKQRTETDTITLSTFSSSSSSPEESRRFRKWSCLRKDPETTPSEEEDEDDEDEESG 421
Query: 320 ---EEEGQKGKFFIIDEGFSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVA 376
+ K +D +E+E LL+ASAY++G + + IMYK V+ G V A
Sbjct: 422 YNANQRSGDNKLVTVDGEKEMEIETLLKASAYILGATGSSIMYKAVLEDGR------VFA 475
Query: 377 VRRLTE-GDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK--------------- 420
VRRL E G + RFKDFE + AI ++ HPN+VRL FY+ DEK
Sbjct: 476 VRRLGENGLSQRRFKDFEPHIRAIGKLVHPNLVRLCGFYWGTDEKLVIYDFVPNGSLVNP 535
Query: 421 -------------------LLISDFIRNGSLY----AALHG------------------- 438
L I+ I G Y +HG
Sbjct: 536 RYRKGGGSSSPYHLPWETRLKIAKGIARGLAYLHEKKHVHGNLKPSNILLGHDMEPKIGD 595
Query: 439 FGLNRLLPG---------TSKVTKNETIVTSG------------TGSRISAISNVYLAPE 477
FGL RLL G +S++ ++ TS + S + A+S Y APE
Sbjct: 596 FGLERLLTGETSYIRAGGSSRIFSSKRYTTSSREFSSIGPTPSPSPSSVGAMS-PYCAPE 654
Query: 478 ARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVID 537
+ K + K DVY FG++LLE+LTG++ G GL V R R + D
Sbjct: 655 S-FRSLKPSPKWDVYGFGVILLELLTGKIVSVEEIVLGNGLT--VEDGHRAVR----MAD 707
Query: 538 PALVKEIHAKRQ-VLATFHIALNCTELDPEFRPRMRTVSESLDR 580
A+ E+ K++ +L F + +C P+ RP M+ L+R
Sbjct: 708 VAIRGELDGKQEFLLDCFKLGYSCASPVPQKRPTMKESLAVLER 751
|
Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q9M9C5|Y1680_ARATH Probable leucine-rich repeat receptor-like protein kinase At1g68400 OS=Arabidopsis thaliana GN=At1g68400 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 235 bits (600), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 204/626 (32%), Positives = 300/626 (47%), Gaps = 87/626 (13%)
Query: 25 DGLALLALKAAIAQDPTRALDSWSESDSTPCHWSGIHCIRNRVTSLYLPNRNLTGYMPSE 84
D LL K + D T L+SW+ + + PC W+G+ C RNRVT L L + NLTG + S
Sbjct: 31 DSETLLNFK--LTADSTGKLNSWNTT-TNPCQWTGVSCNRNRVTRLVLEDINLTGSISSL 87
Query: 85 LGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144
L + LSL NN S PIP NL N T L L L++N F G P I +L L LDL
Sbjct: 88 TSLTSLRV-LSLKHNNLSGPIP-NLSNLTALKLLFLSNNQFSGNFPTSITSLTRLYRLDL 145
Query: 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ 204
S N +G +P L DL L S N+FSGQIP + + + ++ NN +G+IP
Sbjct: 146 SFNNFSGQIPPDLTDLTHLLTLRLES-NRFSGQIPNI--NLSDLQDFNVSGNNFNGQIPN 202
Query: 205 VGSLLNQGP-TAFSGNPGLCGFPLQSPCPEPENPKVHANP-EVEDGPQN-----PKNTNF 257
L+Q P + F+ NP LCG PL +P P E + P N P +
Sbjct: 203 S---LSQFPESVFTQNPSLCGAPLLKCTKLSSDPTKPGRPDEAKASPLNKPETVPSSPTS 259
Query: 258 GYSGDVKDRGRNGSVV--VSVISGVSVVVGVVSVSVW-LFRRKRRAREGKMGKEEKTNDA 314
+ GD + S + +++I G +++ VS+ ++ F R+ + K K +
Sbjct: 260 IHGGDKSNNTSRISTISLIAIILGDFIILSFVSLLLYYCFWRQYAVNKKKHSKILEGEKI 319
Query: 315 VLVTD-------------EEEGQKGKFFIIDEGFSLELEDLLRASAYVVGKSKNGIMYKV 361
V ++ ++ G KGK + ELEDLLRASA ++GK G YK
Sbjct: 320 VYSSNPYPTSTQNNNNQNQQVGDKGKMVFFEGTRRFELEDLLRASAEMLGKGGFGTAYKA 379
Query: 362 VVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKL 421
V+ G+ VAV+RL + K+FE ++E + R++H N+V LKA+Y+A +EKL
Sbjct: 380 VLEDGN------EVAVKRLKDAVTVAGKKEFEQQMEVLGRLRHTNLVSLKAYYFAREEKL 433
Query: 422 LISDFIRNGSLYAALHG----------------------------FGLNRLLPGTSKVTK 453
L+ D++ NGSL+ LHG G + L T K
Sbjct: 434 LVYDYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHGSCKTLKLTHGDIK 493
Query: 454 NETIVTSGTG--------------SRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLL 499
+ ++ +G S+ A SN Y APE I G K TQK DVYSFG++LL
Sbjct: 494 STNVLLDRSGNARVSDFGLSIFAPSQTVAKSNGYRAPEL-IDGRKHTQKSDVYSFGVLLL 552
Query: 500 EILTGRLP---DAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHI 556
EILTG+ P + G L V+ RE +EV D L++ + +++ I
Sbjct: 553 EILTGKCPNMVETGHSGGAVDLPRWVQSVVREEW-TAEVFDLELMRYKDIEEEMVGLLQI 611
Query: 557 ALNCTELDPEFRPRMRTVSESLDRVK 582
A+ CT + + RP+M V + ++ ++
Sbjct: 612 AMACTAVAADHRPKMGHVVKLIEDIR 637
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9C9N5|Y1668_ARATH Probable inactive leucine-rich repeat receptor-like protein kinase At1g66830 OS=Arabidopsis thaliana GN=At1g66830 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 234 bits (597), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 168/507 (33%), Positives = 245/507 (48%), Gaps = 96/507 (18%)
Query: 2 LLPLLFFALLLLFPAPLCFSLNQDGLALLALKAAIAQDPTRALDSWSESDSTPCHWSGIH 61
L +L F L F + SLN GLALL+ K +I +W+ SDS PC W G+
Sbjct: 4 LFLILCFILTHFFA--IATSLNDQGLALLSFKQSIQNQSDSVFTNWNSSDSNPCSWQGVT 61
Query: 62 CIRN-RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDL 120
C + RV S+ LPN+ L+G + +G L SL ++L N+F +P LF L L L
Sbjct: 62 CNYDMRVVSIRLPNKRLSGSLDPSIGSLLSLRHINLRDNDFQGKLPVELFGLKGLQSLVL 121
Query: 121 AHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGS---------------------------- 152
+ NSF G +P+ I +LK+L LDLS N NGS
Sbjct: 122 SGNSFSGFVPEEIGSLKSLMTLDLSENSFNGSISLSLIPCKKLKTLVLSKNSFSGDLPTG 181
Query: 153 ---------------------LPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSL 191
+PE + L L GTL+LS N FSG IP G+ P ++ +
Sbjct: 182 LGSNLVHLRTLNLSFNRLTGTIPEDVGSLENLKGTLDLSHNFFSGMIPTSLGNLPELLYV 241
Query: 192 DLRNNNLSGEIPQVGSLLNQGPTAFSGNPGLCGFPLQSPCPEPENPKVHANPEVEDGPQN 251
DL NNLSG IP+ LLN GP AF GNP LCG P++ C V +
Sbjct: 242 DLSYNNLSGPIPKFNVLLNAGPNAFQGNPFLCGLPIKISCSTRNTQVVPSQL-------- 293
Query: 252 PKNTNFGYSGDVKDRGRNGSVVVSVISGVSVVVGVVSVSVWLFRRKRRAREG-------- 303
Y+ R ++ + V+ ++ + S+ ++ + RK AR
Sbjct: 294 -------YTRRANHHSRLCIILTATGGTVAGIIFLASLFIY-YLRKASARANKDQNNRTC 345
Query: 304 -------KMGKEE----KTNDAVLVTDEEEGQKGKFFIIDEGFSLELEDLLRASAYVVGK 352
K K E KT ++ T +E + F +D +L+ LL+ASA+++GK
Sbjct: 346 HINEKLKKTTKPEFLCFKTGNSESETLDENKNQQVFMPMDPEIEFDLDQLLKASAFLLGK 405
Query: 353 SKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATW-RFKDFESEVEAIARVQHPNIVRLK 411
S+ G++YKVV+ G ++AVRRL D W R K+F ++VEA+A+++HPN++ LK
Sbjct: 406 SRIGLVYKVVLENG------LMLAVRRLE--DKGWLRLKEFLADVEAMAKIKHPNVLNLK 457
Query: 412 AFYYANDEKLLISDFIRNGSLYAALHG 438
A ++ +EKLLI D+I NG L +A+ G
Sbjct: 458 ACCWSPEEKLLIYDYIPNGDLGSAIQG 484
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Arabidopsis thaliana (taxid: 3702) |
| >sp|O48788|Y2267_ARATH Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana GN=At2g26730 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 226 bits (577), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 202/620 (32%), Positives = 291/620 (46%), Gaps = 100/620 (16%)
Query: 31 ALKAAIAQDPTRALDSWSESDSTPCHWSGIHCIRNR--VTSLYLPNRNLTGYMPS-ELGL 87
AL + Q P W+ESDS C+W G+ C N+ + SL LP L G +PS LG
Sbjct: 31 ALLTFLQQIPHENRLQWNESDSA-CNWVGVECNSNQSSIHSLRLPGTGLVGQIPSGSLGR 89
Query: 88 LNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSN 147
L L LSL SN S IP++ N T+L L L HN F G P L NL LD+SSN
Sbjct: 90 LTELRVLSLRSNRLSGQIPSDFSNLTHLRSLYLQHNEFSGEFPTSFTQLNNLIRLDISSN 149
Query: 148 LLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGS 207
GS+P + +L LTG L L N FSG +P + +V ++ NNNL+G IP S
Sbjct: 150 NFTGSIPFSVNNLTHLTG-LFLGNNGFSGNLPSISLG---LVDFNVSNNNLNGSIPS--S 203
Query: 208 LLNQGPTAFSGNPGLCGFPLQSPCPEPENPKVHANPEVEDGPQNPKNTNFGYSGDVKDRG 267
L +F+GN LCG PL+ PC +P NP N K +
Sbjct: 204 LSRFSAESFTGNVDLCGGPLK-PCK-----SFFVSPSPSPSLINPSN----RLSSKKSKL 253
Query: 268 RNGSVVVSVISGVSVVVGVVSVSVWLFRRKRRAREGKMGKEEK---------------TN 312
++V +++ V + ++++ ++L RKRR K+ K ++
Sbjct: 254 SKAAIVAIIVASALVALLLLALLLFLCLRKRRGSNEARTKQPKPAGVATRNVDLPPGASS 313
Query: 313 DAVLVTDEEEGQKGKF----FIIDEG--FSLELEDLLRASAYVVGKSKNGIMYKVVVGRG 366
VT G G+ + EG +S +LEDLLRASA V+GK G YK V+ G
Sbjct: 314 SKEEVTGTSSGMGGETERNKLVFTEGGVYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEG 373
Query: 367 SGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426
T V V+RL D K+FE+++E + +++HPN++ L+A+YY+ DEKLL+ DF
Sbjct: 374 ------TTVVVKRLK--DVMASKKEFETQMEVVGKIKHPNVIPLRAYYYSKDEKLLVFDF 425
Query: 427 IRNGSLYAALHGF----------------------GL------NRLLPGTSKVTK----- 453
+ GSL A LHG GL +L+ G K +
Sbjct: 426 MPTGSLSALLHGSRGSGRTPLDWDNRMRIAITAARGLAHLHVSAKLVHGNIKASNILLHP 485
Query: 454 -----------NETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEIL 502
N+ S +R++ Y APE + K T K DVYSFG++LLE+L
Sbjct: 486 NQDTCVSDYGLNQLFSNSSPPNRLAG----YHAPEV-LETRKVTFKSDVYSFGVLLLELL 540
Query: 503 TGRLPD-AGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCT 561
TG+ P+ A +G L V RE +EV D L++ + + +++ IA+ C
Sbjct: 541 TGKSPNQASLGEEGIDLPRWVLSVVREEW-TAEVFDVELMRYHNIEEEMVQLLQIAMACV 599
Query: 562 ELDPEFRPRMRTVSESLDRV 581
P+ RP M+ V ++ V
Sbjct: 600 STVPDQRPVMQEVLRMIEDV 619
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q94C77|RPKL_ARATH Receptor protein kinase-like protein At4g34220 OS=Arabidopsis thaliana GN=At4g34220 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 222 bits (566), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 187/558 (33%), Positives = 261/558 (46%), Gaps = 142/558 (25%)
Query: 6 LFFALLL---LFPAPLCFSLNQDGLALLALKAAIAQDPTRALDSWSESDSTPCHWSGIHC 62
L F+L+L LF +LN DG+ LL K +I DP L +W+ D+TPC W+G+ C
Sbjct: 8 LLFSLVLFHFLFVPTQLQALNTDGVLLLTFKYSILTDPLSVLRNWNYDDATPCLWTGVTC 67
Query: 63 IR---------NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNAT 113
RVTSL LPN++L G + +L + L L L+SN F+ +P ++FNAT
Sbjct: 68 TELGKPNTPDMFRVTSLVLPNKHLLGSITPDLFSIPYLRILDLSSNFFNGSLPDSVFNAT 127
Query: 114 ------------------------NLVYLDLAHNSFCGPIPDRIKTLKNLTH-------- 141
NL L+L+ N+F G IP I LKNLT
Sbjct: 128 ELQSISLGSNNLSGDLPKSVNSVTNLQLLNLSANAFTGEIPLNISLLKNLTVVSLSKNTF 187
Query: 142 -------------LDLSSNLLNGSLPEFLLDLRALT-GTLNLSFNQFSGQI-PEMYGHFP 186
LDLSSNLLNGSLP+ DL + LNLS N+ G+I P FP
Sbjct: 188 SGDIPSGFEAAQILDLSSNLLNGSLPK---DLGGKSLHYLNLSHNKVLGEISPNFAEKFP 244
Query: 187 VMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGLCGFPLQSPCPEPE----------- 235
++DL NNL+G IP SLLNQ +FSGN LCG PL+ C P
Sbjct: 245 ANATVDLSFNNLTGPIPSSLSLLNQKAESFSGNQELCGKPLKILCSIPSTLSNPPNISET 304
Query: 236 -NPKVHANPEVEDGPQNPKNTNFGYSGDVKDRGRN-GSVVVSVISGVSVVVGVVSVSVWL 293
+P + P P NP +G K + ++ V+ I G++ +G++ + V+
Sbjct: 305 TSPAIAVKPR-STAPINPLTEKPNQTGKSKLKPSTIAAITVADIVGLA-FIGLLVLYVYQ 362
Query: 294 FRRKRR---------------AREGKMGK------------EEKTN--DAVLVT------ 318
R++RR E K K E KT +++T
Sbjct: 363 VRKRRRYPESSKFSFFKFCLEKNEAKKSKPSTTEVTVPESPEAKTTCGSCIILTGGRYDE 422
Query: 319 ------DEEEGQKGKFF-----------------IIDEGFSLELEDLLRASAYVVGKSKN 355
D E Q + F +D L+L+ LL+ASAY++G +
Sbjct: 423 TSTSESDVENQQTVQAFTRTDGGQLKQSSQTQLVTVDGETRLDLDTLLKASAYILGTTGT 482
Query: 356 GIMYKVVVGRGSGMGAPTVVAVRRL-TEGDATWRFKDFESEVEAIARVQHPNIVRLKAFY 414
GI+YK V+ G T AVRR+ TE A + K+FE EV AIA+++HPN+VR++ F
Sbjct: 483 GIVYKAVLENG------TAFAVRRIETESCAAAKPKEFEREVRAIAKLRHPNLVRIRGFC 536
Query: 415 YANDEKLLISDFIRNGSL 432
+ +DEKLLISD++ NGSL
Sbjct: 537 WGDDEKLLISDYVPNGSL 554
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9M8T0|Y3288_ARATH Probable inactive receptor kinase At3g02880 OS=Arabidopsis thaliana GN=At3g02880 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 208 bits (530), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 199/644 (30%), Positives = 299/644 (46%), Gaps = 100/644 (15%)
Query: 3 LPLLFFALLLLFPAPLCFSLNQDGLALLALKAAIAQDPTRALDSWSESDSTPCHWSGIHC 62
L L L + + A + L D ALLA++ ++ P W+ S S+PC+W G+HC
Sbjct: 7 LSLSVVFLFVFYLAAVTSDLESDRRALLAVRNSVRGRPLL----WNMSASSPCNWHGVHC 62
Query: 63 IRNRVTSLYLPNRNLTGYMP-SELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLA 121
RVT+L LP L G +P +G L L LSL N+ S PIP++ N L YL L
Sbjct: 63 DAGRVTALRLPGSGLFGSLPIGGIGNLTQLKTLSLRFNSLSGPIPSDFSNLVLLRYLYLQ 122
Query: 122 HNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEM 181
N+F G IP + TL ++ ++L N +G +P+ + L TL L NQ SG IPE+
Sbjct: 123 GNAFSGEIPSLLFTLPSIIRINLGENKFSGRIPDNVNSATRLV-TLYLERNQLSGPIPEI 181
Query: 182 YGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGLCGFPLQSPCPEPENPKVHA 241
P+ ++ +N L+G IP SL + TAF GN LCG PL + C E E+P
Sbjct: 182 T--LPLQ-QFNVSSNQLNGSIPS--SLSSWPRTAFEGNT-LCGKPLDT-C-EAESP---- 229
Query: 242 NPEVEDGPQNPKNTNFGYSGDVKDRGR-NGSVVVSVISGVSVVVGVVSVSVWLFRRKRRA 300
N GP P + KD + + +V ++ G V + ++ + ++ RKR+
Sbjct: 230 NGGDAGGPNTPP--------EKKDSDKLSAGAIVGIVIGCVVGLLLLLLILFCLCRKRKK 281
Query: 301 REGKMGKE------EKTNDAVL------------VTDEEEGQKGK---FFIIDEGFSLEL 339
E + T+ A + T E G K FF+ G +L
Sbjct: 282 EENVPSRNVEAPVAAATSSAAIPKETVVVVPPAKATGSESGAVNKDLTFFVKSFG-EFDL 340
Query: 340 EDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAI 399
+ LL+ASA V+GK G YK G VVAV+RL D K+F + +
Sbjct: 341 DGLLKASAEVLGKGTVGSSYKASFEHG------LVVAVKRLR--DVVVPEKEFRERLHVL 392
Query: 400 ARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHGFGLNRLLP-----------GT 448
+ H N+V L A+Y++ DEKLL+ +++ GSL A LHG N P G
Sbjct: 393 GSMSHANLVTLIAYYFSRDEKLLVFEYMSKGSLSAILHGNKGNGRTPLNWETRAGIALGA 452
Query: 449 SK----------VTKNETIVTSG---TGSRISAISNVYLAP-------EARIYG------ 482
++ T + I +S + S + +S+ LAP RI G
Sbjct: 453 ARAISYLHSRDGTTSHGNIKSSNILLSDSYEAKVSDYGLAPIISSTSAPNRIDGYRAPEI 512
Query: 483 ---SKFTQKCDVYSFGIVLLEILTGRLPDAGPEN-DGKGLESLVRKAFRERRPLSEVIDP 538
K +QK DVYSFG+++LE+LTG+ P N +G L V+ ++ P S+V+DP
Sbjct: 513 TDARKISQKADVYSFGVLILELLTGKSPTHQQLNEEGVDLPRWVQSVTEQQTP-SDVLDP 571
Query: 539 ALVK-EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
L + + ++ I ++CT P+ RP M V+ ++ V
Sbjct: 572 ELTRYQPEGNENIIRLLKIGMSCTAQFPDSRPSMAEVTRLIEEV 615
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9LVM0|Y5830_ARATH Probable inactive receptor kinase At5g58300 OS=Arabidopsis thaliana GN=At5g58300 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 207 bits (528), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 189/618 (30%), Positives = 295/618 (47%), Gaps = 87/618 (14%)
Query: 22 LNQDGLALLALKAAIAQDPTRALDSWSESDSTPCHWSGIHCIRN--RVTSLYLPNRNLTG 79
LN D ALLA A++ R L+ W+ ++ W G+ C + V +L LP L G
Sbjct: 45 LNSDRQALLAFAASVPH--LRRLN-WNSTNHICKSWVGVTCTSDGTSVHALRLPGIGLLG 101
Query: 80 YMP-SELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKN 138
+P + LG L SL LSL SN S +P ++ + +L Y+ L HN+F G +P + +
Sbjct: 102 PIPPNTLGKLESLRILSLRSNLLSGNLPPDIHSLPSLDYIYLQHNNFSGEVPSFVS--RQ 159
Query: 139 LTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNL 198
L LDLS N G +P +L+ LTG L+L N+ SG +P + + L+L NN+L
Sbjct: 160 LNILDLSFNSFTGKIPATFQNLKQLTG-LSLQNNKLSGPVPNL--DTVSLRRLNLSNNHL 216
Query: 199 SGEIPQVGSLLNQGP-TAFSGNPGLCGFPLQSPCPEPENPKVHANPEVEDGPQNPKNTNF 257
+G IP S L P ++FSGN LCG PLQ PC +P P + P P F
Sbjct: 217 NGSIP---SALGGFPSSSFSGNTLLCGLPLQ-PCAT-SSPPPSLTPHISTPPLPP----F 267
Query: 258 GYSGDVKDRGRNGSVVVSVISGVSVVVGVVSVSVWLFRRKRRAREGKMGKEEKTNDAV-- 315
+ K + +++ G ++++ + + + +K+ RE + K + +
Sbjct: 268 PHKEGSKRKLHVSTIIPIAAGGAALLLLITVIILCCCIKKKDKREDSIVKVKTLTEKAKQ 327
Query: 316 -LVTDEEEGQKGKF-FIIDEGFSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPT 373
+ +E +K K F ++ +LEDLLRASA V+GK G YK V+ T
Sbjct: 328 EFGSGVQEPEKNKLVFFNGCSYNFDLEDLLRASAEVLGKGSYGTAYKAVLEES------T 381
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
V V+RL E A R +FE ++E I+RV HP++V L+A+YY+ DEKL++ D+ G+L
Sbjct: 382 TVVVKRLKEVAAGKR--EFEQQMEIISRVGNHPSVVPLRAYYYSKDEKLMVCDYYPAGNL 439
Query: 433 YAALHG--------FGLNRLLPGTSKVTKNETIVTSGTGSRIS----AISNV-------- 472
+ LHG + + T K + + G + S SNV
Sbjct: 440 SSLLHGNRGSEKTPLDWDSRVKITLSAAKGIAHLHAAGGPKFSHGNIKSSNVIMKQESDA 499
Query: 473 ----------------------YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAG 510
Y APE + K T K DVYSFG+++LE+LTG+ P
Sbjct: 500 CISDFGLTPLMAVPIAPMRGAGYRAPEV-METRKHTHKSDVYSFGVLILEMLTGKSPVQS 558
Query: 511 PENDG-----KGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDP 565
P D + ++S+VR+ + SEV D L++ + + +++ IA+ C P
Sbjct: 559 PSRDDMVDLPRWVQSVVREEWT-----SEVFDIELMRFQNIEEEMVQMLQIAMACVAQVP 613
Query: 566 EFRPRMRTVSESLDRVKL 583
E RP M V ++ +++
Sbjct: 614 EVRPTMDDVVRMIEEIRV 631
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9C9Y8|Y3868_ARATH Probable inactive receptor kinase At3g08680 OS=Arabidopsis thaliana GN=At3g08680 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 205 bits (521), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 194/647 (29%), Positives = 306/647 (47%), Gaps = 100/647 (15%)
Query: 1 MLLPLLFFALLLLFPAPLCFSLNQDGLALLALKAAIAQDPTRALDSWSESDSTPCHWSGI 60
++ LF + L + D ALL + + +R L+ W+ + W+GI
Sbjct: 4 IIAAFLFLLVTTFVSRCLSADIESDKQALLEFASLVPH--SRKLN-WNSTIPICASWTGI 60
Query: 61 HCIRN--RVTSLYLPNRNLTGYMPSE-LGLLNSLTRLSLASNNFSKPIPANLFNATNLVY 117
C +N RVT+L LP L G +P + L++L +SL SN+ IP+ + + +
Sbjct: 61 TCSKNNARVTALRLPGSGLYGPLPEKTFEKLDALRIISLRSNHLQGNIPSVILSLPFIRS 120
Query: 118 LDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQ 177
L N+F G IP + L +LDLS+N L+G++P L +L LT L+L N SG
Sbjct: 121 LYFHENNFSGTIPPVLS--HRLVNLDLSANSLSGNIPTSLQNLTQLT-DLSLQNNSLSGP 177
Query: 178 IPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGLCGFPLQSPCPEPENP 237
IP + P + L+L NNL+G +P S+ + ++F GN LCG PL +PCPE
Sbjct: 178 IPNLP---PRLKYLNLSFNNLNGSVPS--SVKSFPASSFQGNSLLCGAPL-TPCPENTTA 231
Query: 238 KVHANPEVEDGPQNPKNTNFGYSGDVKDRGRNGSVVVSVISGVSVVVGVVSVSVWLFRRK 297
+P + P TN G G K G++V + G ++ ++++ +K
Sbjct: 232 ---PSPSPTTPTEGPGTTNIG-RGTAKKVLSTGAIVGIAVGGSVLLFIILAIITLCCAKK 287
Query: 298 R----------RAREGKM-GKEEKTNDAVLVTDEEEGQKGKF-FIIDEGFSLELEDLLRA 345
R +A+ G+ K E+ V +E +K K F ++ +LEDLLRA
Sbjct: 288 RDGGQDSTAVPKAKPGRSDNKAEEFGSGV-----QEAEKNKLVFFEGSSYNFDLEDLLRA 342
Query: 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-H 404
SA V+GK G YK ++ G T V V+RL E A R +FE ++EA+ R+ H
Sbjct: 343 SAEVLGKGSYGTTYKAILEEG------TTVVVKRLKEVAAGKR--EFEQQMEAVGRISPH 394
Query: 405 PNIVRLKAFYYANDEKLLISDFIRNGSLYAALHG----------------------FGLN 442
N+ L+A+Y++ DEKLL+ D+ + G+ LHG G++
Sbjct: 395 VNVAPLRAYYFSKDEKLLVYDYYQGGNFSMLLHGNNEGGRAALDWETRLRICLEAARGIS 454
Query: 443 --------RLLPGTSK-----VTKNETIVTSGTG--------SRISAISNVYLAPEARIY 481
+LL G K +T+ + S G + I + S Y APEA I
Sbjct: 455 HIHSASGAKLLHGNIKSPNVLLTQELHVCVSDFGIAPLMSHHTLIPSRSLGYRAPEA-IE 513
Query: 482 GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDG-----KGLESLVRKAFRERRPLSEVI 536
K TQK DVYSFG++LLE+LTG+ ++ K ++S+VR+ + EV
Sbjct: 514 TRKHTQKSDVYSFGVLLLEMLTGKAAGKTTGHEEVVDLPKWVQSVVREEWT-----GEVF 568
Query: 537 DPALVKEIH-AKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582
D L+K+ H + +++ IA+ C P+ RP M V ++ ++
Sbjct: 569 DVELIKQQHNVEEEMVQMLQIAMACVSKHPDSRPSMEEVVNMMEEIR 615
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9FHK7|Y5516_ARATH Probable leucine-rich repeat receptor-like protein kinase At5g05160 OS=Arabidopsis thaliana GN=At5g05160 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 202 bits (515), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 196/647 (30%), Positives = 304/647 (46%), Gaps = 113/647 (17%)
Query: 7 FFALLLLFPAPLCFS-LNQDGLALLALKAAIAQDPTRALDSWSESDSTPCHWSGIHCIRN 65
FF LLL A L + L D ALL A++ P +W+++ S W GI C +
Sbjct: 13 FFFLLLAATAVLVSADLASDEQALLNFAASVPHPPKL---NWNKNLSLCSSWIGITCDES 69
Query: 66 ----RVTSLYLPNRNLTGYMP-SELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDL 120
RV ++ LP L G +P + LG L++L LSL SN+ +P+++ + +L YL L
Sbjct: 70 NPTSRVVAVRLPGVGLYGSIPPATLGKLDALKVLSLRSNSLFGTLPSDILSLPSLEYLYL 129
Query: 121 AHNSFCGPIP-DRIKTL-KNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQI 178
HN+F G + + + ++ K L LDLS N L+G++P L +L +T L L N F G I
Sbjct: 130 QHNNFSGELTTNSLPSISKQLVVLDLSYNSLSGNIPSGLRNLSQIT-VLYLQNNSFDGPI 188
Query: 179 PEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPT-AFSGNPGLCGFPLQ--------- 228
+ P + ++L NNLSG IP+ L + P +F GN LCG PL
Sbjct: 189 DSL--DLPSVKVVNLSYNNLSGPIPE---HLKKSPEYSFIGNSLLCGPPLNACSGGAISP 243
Query: 229 -SPCPEPENPKVHANPEVEDGPQNPKNTNFGYSGDVKDRGRNGSVVVSVISGVSVVV--- 284
S P P +H R ++ + +++++ G SV V
Sbjct: 244 SSNLPRPLTENLHP----------------------VRRRQSKAYIIAIVVGCSVAVLFL 281
Query: 285 GVVSVSVWLFRRKRRAREG------KMGKEEKTNDAVLVTDEEEGQKGKFFIIDE-GFSL 337
G+V + V L ++ ++ G +MG + ++ +K K F + +
Sbjct: 282 GIVFL-VCLVKKTKKEEGGGEGVRTQMGGVNSKKPQDFGSGVQDPEKNKLFFFERCNHNF 340
Query: 338 ELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVE 397
+LEDLL+ASA V+GK G YK V + T V V+RL E A+ K+FE ++E
Sbjct: 341 DLEDLLKASAEVLGKGSFGTAYKAV------LEDTTAVVVKRLREVVASK--KEFEQQME 392
Query: 398 AIARV-QHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHGFGLNR---------LLPG 447
+ ++ QH N V L A+YY+ DEKLL+ ++ GSL+ +HG +R + G
Sbjct: 393 IVGKINQHSNFVPLLAYYYSKDEKLLVYKYMTKGSLFGIMHGNRGDRGVDWETRMKIATG 452
Query: 448 TSK--------------VTKNETIVTSGTGSRISAISNV--------------YLAPEAR 479
TSK + + ++T +S S V Y APE
Sbjct: 453 TSKAISYLHSLKFVHGDIKSSNILLTEDLEPCLSDTSLVTLFNLPTHTPRTIGYNAPEV- 511
Query: 480 IYGSKFTQKCDVYSFGIVLLEILTGRLPDAGP----ENDGKGLESLVRKAFRERRPLSEV 535
I + +Q+ DVYSFG+V+LE+LTG+ P P E L VR RE +EV
Sbjct: 512 IETRRVSQRSDVYSFGVVILEMLTGKTPLTQPGLEDERVVIDLPRWVRSVVREEWT-AEV 570
Query: 536 IDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582
D L+K + + +++ +AL C +PE RP+M V+ ++ V+
Sbjct: 571 FDVELLKFQNIEEEMVQMLQLALACVARNPESRPKMEEVARMIEDVR 617
|
Probable leucine-rich repeat receptor-like protein kinase. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: - |
| >sp|Q9SCT4|IMK2_ARATH Probably inactive leucine-rich repeat receptor-like protein kinase IMK2 OS=Arabidopsis thaliana GN=IMK2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 201 bits (511), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 175/574 (30%), Positives = 273/574 (47%), Gaps = 77/574 (13%)
Query: 62 CIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLA 121
C + + + + + L+G +P E G L L L + N+ + IP + N ++LV L+L
Sbjct: 260 CKHSLLEEVSISHNQLSGSIPRECGGLPHLQSLDFSYNSINGTIPDSFSNLSSLVSLNLE 319
Query: 122 HNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEM 181
N GPIPD I L NLT L+L N +NG +PE + ++ + L+LS N F+G IP
Sbjct: 320 SNHLKGPIPDAIDRLHNLTELNLKRNKINGPIPETIGNISGIK-KLDLSENNFTGPIPLS 378
Query: 182 YGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGLCGFPLQSPCPEPENPK-VH 240
H + S ++ N LSG +P V S ++F GN LCG+ +PCP P++ +
Sbjct: 379 LVHLAKLSSFNVSYNTLSGPVPPVLS-KKFNSSSFLGNIQLCGYSSSNPCPAPDHHHPLT 437
Query: 241 ANPEVEDGPQNPKNTNFGYSGDVKDRGRNGSVVVSVISGVSVVVGVVSVSVWLFRRKRRA 300
+P P+ + VKD V++ I + ++ ++ + K+RA
Sbjct: 438 LSPTSSQEPRKHHHRKL----SVKD------VILIAIGALLAILLLLCCILLCCLIKKRA 487
Query: 301 ----REGKMGKEEKTNDAVLVTDEEEGQK--GKFFIIDEGFSLELEDLLRASAYVVGKSK 354
++GK EKT A + G + GK D F +DLL A+A ++GKS
Sbjct: 488 ALKQKDGKDKTSEKTVSAGVAGTASAGGEMGGKLVHFDGPFVFTADDLLCATAEIMGKST 547
Query: 355 NGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFY 414
G YK + G+ VAV+RL E T K+FE EV A+ +++H N++ L+A+Y
Sbjct: 548 YGTAYKATLEDGN------EVAVKRLRE-KTTKGVKEFEGEVTALGKIRHQNLLALRAYY 600
Query: 415 YA-NDEKLLISDFIRNGSLYAALHGFGLNRLLP-------------GTSKVTKNETIVTS 460
EKLL+ D++ GSL A LH G L+P G + + NE ++
Sbjct: 601 LGPKGEKLLVFDYMSKGSLSAFLHARGPETLIPWETRMKIAKGISRGLAHLHSNENMIHE 660
Query: 461 G-TGSRI---------------------SAISNV--------YLAPE-ARIYGSKFTQKC 489
T S I +A +NV Y APE ++I + + K
Sbjct: 661 NLTASNILLDEQTNAHIADYGLSRLMTAAAATNVIATAGTLGYRAPEFSKIKNA--SAKT 718
Query: 490 DVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA-KR 548
DVYS GI++LE+LTG+ P G +G L V +E +EV D L++E +
Sbjct: 719 DVYSLGIIILELLTGKSP--GEPTNGMDLPQWVASIVKEEW-TNEVFDLELMRETQSVGD 775
Query: 549 QVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582
++L T +AL+C + P RP V E L+ ++
Sbjct: 776 ELLNTLKLALHCVDPSPAARPEANQVVEQLEEIR 809
|
Arabidopsis thaliana (taxid: 3702) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 584 | ||||||
| 255587441 | 654 | ATP binding protein, putative [Ricinus c | 0.979 | 0.874 | 0.612 | 0.0 | |
| 297739718 | 739 | unnamed protein product [Vitis vinifera] | 0.970 | 0.767 | 0.601 | 0.0 | |
| 359481828 | 640 | PREDICTED: probable inactive leucine-ric | 0.970 | 0.885 | 0.587 | 0.0 | |
| 224120204 | 652 | predicted protein [Populus trichocarpa] | 0.958 | 0.858 | 0.605 | 0.0 | |
| 224139838 | 652 | predicted protein [Populus trichocarpa] | 0.986 | 0.883 | 0.599 | 0.0 | |
| 449464892 | 650 | PREDICTED: probable inactive leucine-ric | 0.946 | 0.850 | 0.575 | 0.0 | |
| 449476368 | 650 | PREDICTED: probable inactive leucine-ric | 0.946 | 0.850 | 0.575 | 0.0 | |
| 356503468 | 653 | PREDICTED: probable inactive leucine-ric | 0.984 | 0.880 | 0.555 | 0.0 | |
| 356572062 | 648 | PREDICTED: probable inactive leucine-ric | 0.977 | 0.881 | 0.56 | 0.0 | |
| 15230877 | 662 | leucine-rich repeat protein kinase-like | 0.953 | 0.841 | 0.540 | 1e-179 |
| >gi|255587441|ref|XP_002534272.1| ATP binding protein, putative [Ricinus communis] gi|223525595|gb|EEF28109.1| ATP binding protein, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 735 bits (1898), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/647 (61%), Positives = 464/647 (71%), Gaps = 75/647 (11%)
Query: 10 LLLLFPAPLCFSLNQDGLALLALKAAIAQDPTRALDSWSESDSTPCHWSGIHCIRNRVTS 69
L+ F APL FSL +DGLALLALKAAI DPTR LDSWS+SD TPCHW GI CI +RVTS
Sbjct: 11 FLIFFFAPLSFSLTRDGLALLALKAAITTDPTRVLDSWSDSDQTPCHWHGITCINHRVTS 70
Query: 70 LYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPI 129
L LPN++ TGY+PSELGLL+SLTRL+L+ NNFS+PIP++LFNAT+L LDL+HNS GP+
Sbjct: 71 LILPNKSFTGYLPSELGLLDSLTRLTLSHNNFSEPIPSHLFNATSLRSLDLSHNSLSGPV 130
Query: 130 PDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMV 189
P +IK+L+ LTHLDLSSN LNGSLP+ L +LR+L+GTLNLS+NQF+G+IP YG FPV V
Sbjct: 131 PTQIKSLQELTHLDLSSNFLNGSLPDVLTELRSLSGTLNLSYNQFTGEIPVSYGDFPVFV 190
Query: 190 SLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGLCGFPLQSPCPEPENPKVHANPEVEDGP 249
SLDLR+NNLSG++P VGSL+NQGPTAFSGNP LCGFPLQ+ CPE N N E P
Sbjct: 191 SLDLRHNNLSGKVPLVGSLVNQGPTAFSGNPSLCGFPLQTLCPEATNITSSENTE---NP 247
Query: 250 QNPKNTNFGYSGDV--KDRGRNGSVVVSVISGVSVVVGVVSVSVWLFRRKR--RAREGKM 305
+NP+N NFG + K R +NGSV V +ISGV VV+G VS+S WL R+K + KM
Sbjct: 248 ENPRNPNFGLLPQIEEKQREKNGSVAVPLISGVFVVIGAVSLSAWLLRKKWGGSGEKDKM 307
Query: 306 GKEEKTNDAVLVTD-EEEGQKGKFFIIDEGFSLELEDLLRASAYVVGKSKNGIMYKVVV- 363
GKEE T +D EEGQKGKF +IDEGF+LELEDLLRASAYVVGKS+NGI+YKVVV
Sbjct: 308 GKEESTGGNHASSDISEEGQKGKFVVIDEGFNLELEDLLRASAYVVGKSRNGIVYKVVVG 367
Query: 364 GRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLI 423
GRGSG PTVVAVRRL EGDATW+FK+FESEVEAI RV HPNIV+L+A+YYA+DEKLL+
Sbjct: 368 GRGSGTVVPTVVAVRRLNEGDATWKFKEFESEVEAIGRVHHPNIVQLRAYYYAHDEKLLV 427
Query: 424 SDFIRNGSLYAALHGFGLNRLLP------------------------------GTSKVTK 453
SD+IRNGSLY+ALHG N L P G K TK
Sbjct: 428 SDYIRNGSLYSALHGGPSNTLPPLSWAARLQVAQGTARGLMYVHECSPRKYVHGNLKSTK 487
Query: 454 -------NETIVTSGTGSRISAISNVYLAPEARIY----------GSKFTQKC------- 489
I + G +S S + + Y GSK + C
Sbjct: 488 ILLDDELQPYISSFGLTRLVSGTSKFSTSASKKQYLNQTTVNPTMGSKISAPCNFYLAPE 547
Query: 490 ------------DVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVID 537
DVYSFGI+L+E+LTGRLPDAG ENDGKGLESLVRK FRE RPLSE+ID
Sbjct: 548 ARGFSNKFSQKCDVYSFGIILMELLTGRLPDAGSENDGKGLESLVRKVFREERPLSEIID 607
Query: 538 PALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKLQ 584
PAL+ E+HAK+QV+A FHIALNCTELDPEFRPRMRTVSESLDR+KLQ
Sbjct: 608 PALLSEVHAKKQVVAVFHIALNCTELDPEFRPRMRTVSESLDRIKLQ 654
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297739718|emb|CBI29900.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 725 bits (1871), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/645 (60%), Positives = 460/645 (71%), Gaps = 78/645 (12%)
Query: 6 LFFALLLLFPAPLCFSLNQDGLALLALKAAIAQDPTRALDSWSESDSTPCHWSGIHCIRN 65
L A L+F L SLN DGL+LLALKAAI DPT LD+WSESD PCHW GI C
Sbjct: 107 LGLASFLIFFTCLSSSLNSDGLSLLALKAAIVSDPTGVLDTWSESDLVPCHWGGISCTHG 166
Query: 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSF 125
RVT ++LPNR+ TGY+PSELG L +L +LSLA+NNFSKPIP+ LFNAT L+ LDL+HNS
Sbjct: 167 RVTGVFLPNRSFTGYIPSELGALVNLRQLSLANNNFSKPIPSRLFNATTLLSLDLSHNSL 226
Query: 126 CGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHF 185
GP+P ++K LK L HLDLSSNLLNGSLPE L +L L G+LNLS N+FSG++P YG
Sbjct: 227 SGPLPTQVKALKYLVHLDLSSNLLNGSLPEELAELENLAGSLNLSHNRFSGEVPASYGKI 286
Query: 186 PVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGLCGFPLQSPCPEPENPKVHANPEV 245
P+MVSLDLR+NNL+G+IPQ+GSLLNQGPTAFSGNP LCGFPLQ+PCPE NPK+ NPE
Sbjct: 287 PLMVSLDLRHNNLTGKIPQIGSLLNQGPTAFSGNPSLCGFPLQTPCPEASNPKIFVNPE- 345
Query: 246 EDGPQNPKNTNFGYSGDVKDRGRN------GSVVVSVISGVSVVVGVVSVSVWLFRRKRR 299
NP+ N + D G GSV V +ISG+SVVVGVVSVSVWLFR+KR
Sbjct: 346 -----NPRKPNPSFPNGAADEGEERQKIGGGSVAVPLISGISVVVGVVSVSVWLFRKKRS 400
Query: 300 AREGKMGKEEKTNDAVLVTDEEEGQKGKFFIIDEGFSLELEDLLRASAYVVGKSKNGIMY 359
+ EGK+G+E+ + E+EGQKGKF ++DEGF LELEDLLRASAYVVGKS++GI+Y
Sbjct: 401 SGEGKIGREKLAKEV-----EDEGQKGKFVVVDEGFGLELEDLLRASAYVVGKSRSGIVY 455
Query: 360 KVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDE 419
+VV GR SG +PTVVAVRRL+EGD TWR KDFESEVEAIARV H NIVRL+A+YYANDE
Sbjct: 456 RVVAGRVSG-ASPTVVAVRRLSEGDGTWRLKDFESEVEAIARVHHQNIVRLRAYYYANDE 514
Query: 420 KLLISDF----------------------------IRNGSLYAALH-------------- 437
KLL+SDF I G+ +H
Sbjct: 515 KLLVSDFIRNGSLHTALHGGPSNTLPPLSWAARLKIAQGAARGLMHIHECSPRKYVHGNI 574
Query: 438 ----------------GFGLNRLLPGTSKVTKNETIVTSGT--GSRISAISNVYLAPEAR 479
GFGL RL+ G S +N V++ + GS+ SA S YLAPEAR
Sbjct: 575 KSSKILLDDHLQPYVSGFGLTRLVSGASSKKQNSHQVSTNSVLGSKASANSIAYLAPEAR 634
Query: 480 IYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPA 539
+ G++FTQKCDVYSFGIVL+E+LT RLPDAGPENDGKGLESLVRK FR+ RPLSE+IDPA
Sbjct: 635 VSGTRFTQKCDVYSFGIVLMEVLTARLPDAGPENDGKGLESLVRKVFRDERPLSEIIDPA 694
Query: 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKLQ 584
L+ E++AK+QVL+ FH+ALNCTELDPE RPRMRTVSESLDR+K Q
Sbjct: 695 LLHEVYAKKQVLSAFHVALNCTELDPELRPRMRTVSESLDRIKSQ 739
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359481828|ref|XP_002277291.2| PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/645 (58%), Positives = 451/645 (69%), Gaps = 78/645 (12%)
Query: 6 LFFALLLLFPAPLCFSLNQDGLALLALKAAIAQDPTRALDSWSESDSTPCHWSGIHCIRN 65
L A L+F L SLN DGL+LLALKAAI DPT LD+WSESD PCHW GI C
Sbjct: 8 LGLASFLIFFTCLSSSLNSDGLSLLALKAAIVSDPTGVLDTWSESDLVPCHWGGISCTHG 67
Query: 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSF 125
RVT ++LPNR+ TGY+PSELG L +L +LSLA+NNFSKPIP+ LFNAT L+ LDL+HNS
Sbjct: 68 RVTGVFLPNRSFTGYIPSELGALVNLRQLSLANNNFSKPIPSRLFNATTLLSLDLSHNSL 127
Query: 126 CGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHF 185
GP+P ++K LK L HLDLSSNLLNGSLPE L +L L G+LNLS N+FSG++P YG
Sbjct: 128 SGPLPTQVKALKYLVHLDLSSNLLNGSLPEELAELENLAGSLNLSHNRFSGEVPASYGKI 187
Query: 186 PVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGLCGFPLQSPCPEPENPKVHANPEV 245
P+MVSLDLR+NNL+G+IPQ+GSLLNQGPTAFSGNP LCGFPLQ+PCPE NPK+ NPE
Sbjct: 188 PLMVSLDLRHNNLTGKIPQIGSLLNQGPTAFSGNPSLCGFPLQTPCPEASNPKIFVNPE- 246
Query: 246 EDGPQNPKNTNFGYSGDVKDRGRN------GSVVVSVISGVSVVVGVVSVSVWLFRRKRR 299
NP+ N + D G GSV V +ISG+SVVVGVVSVSVWLFR+KR
Sbjct: 247 -----NPRKPNPSFPNGAADEGEERQKIGGGSVAVPLISGISVVVGVVSVSVWLFRKKRS 301
Query: 300 AREGKMGKEEKTNDAVLVTDEEEGQKGKFFIIDEGFSLELEDLLRASAYVVGKSKNGIMY 359
+ EGK+G+E+ + E+EGQKGKF ++DEGF LELEDLLRASAYVVGKS++GI+Y
Sbjct: 302 SGEGKIGREKLAKEV-----EDEGQKGKFVVVDEGFGLELEDLLRASAYVVGKSRSGIVY 356
Query: 360 KVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDE 419
+VV GR SG +PTVVAVRRL+EGD TWR KDFESEVEAIARV H NIVRL+A+YYANDE
Sbjct: 357 RVVAGRVSG-ASPTVVAVRRLSEGDGTWRLKDFESEVEAIARVHHQNIVRLRAYYYANDE 415
Query: 420 KLLISDFIRNGSLYAALHGFGLNRLLP--------------------------------- 446
KLL+SDFIRNGSL+ ALHG N L P
Sbjct: 416 KLLVSDFIRNGSLHTALHGGPSNTLPPLSWAARLKIAQGAARGLMHIHECSPRKYVHGNI 475
Query: 447 GTSKVTKNETI--VTSGTG-SRI-----SAISNVYLAPEARIYGSKFTQKCDVY------ 492
+SK+ ++ + SG G +R+ S N + + GSK + Y
Sbjct: 476 KSSKILLDDHLQPYVSGFGLTRLVSGASSKKQNSHQVSTNSVLGSKASANSIAYLAPEAR 535
Query: 493 -------------SFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPA 539
SFGIVL+E+LT RLPDAGPENDGKGLESLVRK FR+ RPLSE+IDPA
Sbjct: 536 VSGTRFTQKCDVYSFGIVLMEVLTARLPDAGPENDGKGLESLVRKVFRDERPLSEIIDPA 595
Query: 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKLQ 584
L+ E++AK+QVL+ FH+ALNCTELDPE RPRMRTVSESLDR+K Q
Sbjct: 596 LLHEVYAKKQVLSAFHVALNCTELDPELRPRMRTVSESLDRIKSQ 640
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224120204|ref|XP_002330990.1| predicted protein [Populus trichocarpa] gi|222872920|gb|EEF10051.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 684 bits (1765), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/637 (60%), Positives = 458/637 (71%), Gaps = 77/637 (12%)
Query: 18 LCFSLNQDGLALLALKAAIAQDPTRALDSWSESDSTPCHWSGIHCIRNRVTSLYLPNRNL 77
L SLN DGLALLALKAAI DPT L SW+E+D TPCHW GI CI +RVTSL LPN+NL
Sbjct: 23 LSLSLNTDGLALLALKAAITTDPTDTLASWTETDPTPCHWHGITCINHRVTSLSLPNKNL 82
Query: 78 TGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLK 137
TGY+PSELGLL+SLTRL+L+ NNFSK IP +LFNA+ L +LDL+HNS GPIP +I++L+
Sbjct: 83 TGYIPSELGLLDSLTRLTLSRNNFSKLIPLHLFNASTLRFLDLSHNSLSGPIPAKIESLQ 142
Query: 138 NLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNN 197
LTHLDLSSN LNGSLP L+ L++LTGTLNLS+N FSG+IP YG FPVM+ LDLR+NN
Sbjct: 143 ALTHLDLSSNCLNGSLPASLIKLKSLTGTLNLSYNSFSGEIPGSYGFFPVMLGLDLRHNN 202
Query: 198 LSGEIPQVGSLLNQGPTAFSGNPGLCGFPLQSPCPEPENPKVHANPEVEDGPQNPKNTNF 257
LSG++P VGSL+NQGPTAF+GNP LCGFPLQ+PCPE N + D P+NPK N
Sbjct: 203 LSGKVPLVGSLVNQGPTAFAGNPSLCGFPLQTPCPEA------VNITISDNPENPKGPNP 256
Query: 258 GY-SGDVKD-RGRNGSVVVSVISGVSVVVGVVSVSVWLFRRKRRAREGKMGKEE-KTNDA 314
+ G V++ + + S+ V +ISGVSVV+GVVSVS WL+R+K A EGK+GKE+ +D
Sbjct: 257 VFIPGSVENVKIKTESIAVPLISGVSVVIGVVSVSAWLYRKKWWANEGKVGKEKIDKSDN 316
Query: 315 VLVTDEEEGQKGKFFIIDEGFSLELEDLLRASAYVVGKSKNGIMYKVVV-GRGSGMGAPT 373
VT +EEGQ GKF +IDEGF LELEDLLRASA VVGKS+ GI+YKVVV GRGSG P
Sbjct: 317 NEVTFKEEGQDGKFLVIDEGFDLELEDLLRASASVVGKSRTGIVYKVVVGGRGSGTVVPM 376
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLY 433
VVAVRRL+E DATW+ K+FESEVEAI RV HPNI RL+A+Y+A+DEKLL+SDFIRNGSLY
Sbjct: 377 VVAVRRLSEDDATWKLKEFESEVEAIGRVHHPNIARLRAYYFAHDEKLLVSDFIRNGSLY 436
Query: 434 AALHGFGLNRLLP-------------------------------GTSKVTKN-------- 454
+ALHG G + LP G K TK
Sbjct: 437 SALHG-GPSNTLPVLSWAARLKIAQGTARGLMYIHEHSPRKHVHGNLKSTKILLDDELQP 495
Query: 455 -------ETIVTSGTGSRISAISNVY--------------------LAPEARIYGSKFTQ 487
+V+SG+ SA +Y LAPEAR+ G KFTQ
Sbjct: 496 YISSFGLARLVSSGSKFTTSASKKLYLNQTISSATGLKISAPYNVYLAPEARVSGRKFTQ 555
Query: 488 KCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAK 547
KCDVYSFGIVL+E+LTGRLPDA PENDGKGL+SLVR FRE RPLSE+IDPAL+ E+HA+
Sbjct: 556 KCDVYSFGIVLMELLTGRLPDARPENDGKGLDSLVRNMFREERPLSEIIDPALLSEVHAE 615
Query: 548 RQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKLQ 584
R V+A FHIALNCTELDPE RPRMRTVSE+LD +KL
Sbjct: 616 RHVVAVFHIALNCTELDPELRPRMRTVSENLDCIKLH 652
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224139838|ref|XP_002323301.1| predicted protein [Populus trichocarpa] gi|222867931|gb|EEF05062.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 680 bits (1754), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/657 (59%), Positives = 467/657 (71%), Gaps = 81/657 (12%)
Query: 2 LLPLLFFALLLLFP---APLCFSLNQDGLALLALKAAIAQDPTRALDSWSESDSTPCHWS 58
++P A L+LF PL SLN DGLALLALKAAI DPT L SWSE+D TPCHW
Sbjct: 3 VIPFKVTACLILFTFTNLPLLSSLNTDGLALLALKAAITADPTDTLASWSETDPTPCHWH 62
Query: 59 GIHCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYL 118
GI CI +RVTSL LP++N TGY+P ELGLL SLTRL+L+ NNFSK IP++LFNAT L +L
Sbjct: 63 GITCINDRVTSLSLPDKNFTGYIPFELGLLGSLTRLTLSRNNFSKSIPSHLFNATTLRFL 122
Query: 119 DLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQI 178
DL+HNS GPIP + +L+ LTHLDLSSN LNGSLP L L++LTG LNLS+N FSG+I
Sbjct: 123 DLSHNSLSGPIPANVVSLEALTHLDLSSNCLNGSLPASLNKLKSLTGALNLSYNSFSGEI 182
Query: 179 PEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGLCGFPLQSPCPEPENPK 238
P YG FPVMVSLDLR+NNLSG++P GSL+NQGPTAF+GNP LCGFPLQ+ CPE
Sbjct: 183 PGSYGFFPVMVSLDLRHNNLSGKVPLFGSLVNQGPTAFAGNPSLCGFPLQTACPEA---- 238
Query: 239 VHANPEVEDGPQNPKNTN-FGYSGDV-KDRGRNGSVVVSVISGVSVVVGVVSVSVWLFRR 296
N V D P+NPK+ N + G V K + + GSV V +ISG SVV+GVV+VSVWL+R+
Sbjct: 239 --VNITVSDNPENPKDPNPVLFPGSVGKVKVKTGSVAVPLISGFSVVIGVVTVSVWLYRK 296
Query: 297 KRRAREGKMGKEEKTN--DAVLVTDEEEGQKGKFFIIDEGFSLELEDLLRASAYVVGKSK 354
KRRA EGKMGKEEK D VT EE QKGKF ++DEGF++ELEDLLRASAYVVGKS+
Sbjct: 297 KRRADEGKMGKEEKIEKGDNNEVTFNEEEQKGKFVVMDEGFNMELEDLLRASAYVVGKSR 356
Query: 355 NGIMYKVVVGRGSGMGA-PTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAF 413
+GI+YKVVVG G A PTVVAVRRL+EGDATW+ K+FESEVEAI RV HPNI RL+A+
Sbjct: 357 SGIVYKVVVGGGGSGTAMPTVVAVRRLSEGDATWKLKEFESEVEAIERVHHPNIARLRAY 416
Query: 414 YYANDEKLLISD---------------------------------------FIRNGSLYA 434
Y+A+DEKLL+SD +I S
Sbjct: 417 YFAHDEKLLVSDFIRNGSLYSALHGGPSNTLPVLSWTARLKIAQGTARGLMYIHEHSPRK 476
Query: 435 ALHG-------------------FGLNRLLPGTSKVTK--------NETIVTSGTGSRIS 467
+HG FGL RL+ +SK N+TI +S G +IS
Sbjct: 477 YVHGNLKSTKILLDDELQPYISSFGLTRLVWNSSKFATSASKKQYLNQTI-SSAMGLKIS 535
Query: 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 527
A SN+YLAPEAR+ GSKF+QKCDVYSFGIVL+E+LTGRLP AG ENDG+GLESLVRK F+
Sbjct: 536 APSNIYLAPEARVSGSKFSQKCDVYSFGIVLMELLTGRLPGAGSENDGEGLESLVRKVFQ 595
Query: 528 ERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKLQ 584
E RPLSE+IDPAL+ E+HAK+QV+A FHI+LNCTELDPE RPRMRTVSESLDR+KL
Sbjct: 596 EERPLSEIIDPALLSEVHAKKQVIAVFHISLNCTELDPELRPRMRTVSESLDRIKLH 652
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449464892|ref|XP_004150163.1| PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/636 (57%), Positives = 448/636 (70%), Gaps = 83/636 (13%)
Query: 23 NQDGLALLALKAAIAQDPTRALDSWSESDSTPCHWSGIHCIRNRVTSLYLPNRNLTGYMP 82
N DGL+LLALKAAI DP+ L+SWSE DSTPCHW GI C R+RVT L LPN+ LTGY+P
Sbjct: 24 NSDGLSLLALKAAIESDPSHVLESWSEFDSTPCHWPGIVCTRDRVTQLSLPNKGLTGYIP 83
Query: 83 SELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHL 142
SELGLL+SL RLSLA NNFSKPIP++L+NATNLV LDL+HN+ G + D+I L+ L HL
Sbjct: 84 SELGLLDSLRRLSLAFNNFSKPIPSHLYNATNLVVLDLSHNALSGSLSDQIGDLRKLRHL 143
Query: 143 DLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEI 202
DLSSN LNGSLP L DL L GTLNLS+N+FSG++P +G+ P++V+LD+R+NNL+G+I
Sbjct: 144 DLSSNALNGSLPNRLTDLTELVGTLNLSYNRFSGEVPPSFGNLPLIVNLDVRHNNLTGKI 203
Query: 203 PQVGSLLNQGPTAFSGNPGLCGFPLQSPCPEPENPKVHANPEVEDGPQNPKNTNFGYS-- 260
PQVGSLLNQGPTAFSGNP LCGFPLQ+PCPE +NP + PE PQNPK+ N +
Sbjct: 204 PQVGSLLNQGPTAFSGNPSLCGFPLQTPCPEAQNPNIF--PE---NPQNPKSVNGNFQGY 258
Query: 261 ---GDVKDRGRNGSVVVSVISGVSVVVGVVSVSVWLFRRKR---RAREGKMGKEEKTNDA 314
+ G GS V+V+S + +VGVVSV+VW FRRK R EGK GK ++
Sbjct: 259 GSGRESGGGGVAGSATVAVVSSIIALVGVVSVTVWWFRRKTAVGRPEEGKTGKGSPEGES 318
Query: 315 VLVTDEEEGQKGKFFIIDEGFSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTV 374
+ EGQ GKF ++DEG +LELEDLLRASAYVVGKS++GI+YKVV GRGS GA ++
Sbjct: 319 C---GDLEGQDGKFVVMDEGMNLELEDLLRASAYVVGKSRSGIVYKVVAGRGSTAGA-SI 374
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VAVRRL + DAT FKDFE+E+E+I R+ HPNIVRL+A+YYA+DEKLL++DFI+NGSL+A
Sbjct: 375 VAVRRLNDTDATLTFKDFENEIESIGRINHPNIVRLRAYYYASDEKLLVTDFIKNGSLHA 434
Query: 435 ALHG------------------------------FGLNRLLPGTSKVTK----------- 453
ALHG FG + + G K TK
Sbjct: 435 ALHGSPSSSLLPLPWAARLKIAQGAARGLAYIHEFGARKYVHGNIKSTKILLDDDFEPYI 494
Query: 454 -------------------------NETIVTSGTGSRISAISNVYLAPEARIYGSKFTQK 488
++ +++S G+ IS S +YLAPE R +G K+TQK
Sbjct: 495 SGFGLGRLGQGVPKFSATSSKKLSSSQNMISSIMGTSISTPSPMYLAPEVREFGGKYTQK 554
Query: 489 CDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKR 548
CDVYSFGIVLLE+L+GRLPDAG ENDGKGLE VRKAF+E RPL+EVID ALV EI+AK+
Sbjct: 555 CDVYSFGIVLLEVLSGRLPDAGSENDGKGLECFVRKAFQEERPLTEVIDQALVPEIYAKK 614
Query: 549 QVLATFHIALNCTELDPEFRPRMRTVSESLDRVKLQ 584
QV++ FHIALNCTELDPE RPRMRT+SESLDRVK Q
Sbjct: 615 QVVSMFHIALNCTELDPELRPRMRTISESLDRVKSQ 650
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449476368|ref|XP_004154718.1| PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/636 (57%), Positives = 447/636 (70%), Gaps = 83/636 (13%)
Query: 23 NQDGLALLALKAAIAQDPTRALDSWSESDSTPCHWSGIHCIRNRVTSLYLPNRNLTGYMP 82
N DGL+LLALKAAI DP+ L+SWSE DSTPCHW GI C R+RVT L LPN+ LTGY+P
Sbjct: 24 NSDGLSLLALKAAIESDPSHVLESWSEFDSTPCHWPGIVCTRDRVTQLSLPNKGLTGYIP 83
Query: 83 SELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHL 142
SELGLL+SL RLSLA NNFSKPIP +L+NATNLV LDL+HN+ G + D+I L+ L HL
Sbjct: 84 SELGLLDSLRRLSLAFNNFSKPIPTHLYNATNLVVLDLSHNALSGSLSDQIGDLRKLRHL 143
Query: 143 DLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEI 202
DLSSN LNGSLP L DL L GTLNLS+N+FSG++P +G+ P++V+LD+R+NNL+G+I
Sbjct: 144 DLSSNALNGSLPNRLTDLTELVGTLNLSYNRFSGEVPPSFGNLPLIVNLDVRHNNLTGKI 203
Query: 203 PQVGSLLNQGPTAFSGNPGLCGFPLQSPCPEPENPKVHANPEVEDGPQNPKNTNFGYS-- 260
PQVGSLLNQGPTAFSGNP LCGFPLQ+PCPE +NP + PE PQNPK+ N +
Sbjct: 204 PQVGSLLNQGPTAFSGNPSLCGFPLQTPCPEAQNPNIF--PE---NPQNPKSVNGNFQGY 258
Query: 261 ---GDVKDRGRNGSVVVSVISGVSVVVGVVSVSVWLFRRKR---RAREGKMGKEEKTNDA 314
+ G GS V+V+S + +VGVVSV+VW FRRK R EGK GK ++
Sbjct: 259 GSGRESGGGGVAGSATVAVVSSIIALVGVVSVTVWWFRRKTAVGRPEEGKTGKGSPEGES 318
Query: 315 VLVTDEEEGQKGKFFIIDEGFSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTV 374
+ EGQ GKF ++DEG +LELEDLLRASAYVVGKS++GI+YKVV GRGS GA ++
Sbjct: 319 C---GDLEGQDGKFVVMDEGMNLELEDLLRASAYVVGKSRSGIVYKVVAGRGSTAGA-SI 374
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VAVRRL + DAT FKDFE+E+E+I R+ HPNIVRL+A+YYA+DEKLL++DFI+NGSL+A
Sbjct: 375 VAVRRLNDTDATLTFKDFENEIESIGRINHPNIVRLRAYYYASDEKLLVTDFIKNGSLHA 434
Query: 435 ALHG------------------------------FGLNRLLPGTSKVTK----------- 453
ALHG FG + + G K TK
Sbjct: 435 ALHGSPSSSLLPLPWAARLKIAQGAARGLAYIHEFGARKYVHGNIKSTKILLDDDFEPYI 494
Query: 454 -------------------------NETIVTSGTGSRISAISNVYLAPEARIYGSKFTQK 488
++ +++S G+ IS S +YLAPE R +G K+TQK
Sbjct: 495 SGFGLGRLGQGVPKFSATSSKKLSSSQNMISSIMGTSISTPSPMYLAPEVREFGGKYTQK 554
Query: 489 CDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKR 548
CDVYSFGIVLLE+L+GRLPDAG ENDGKGLE VRKAF+E RPL+EVID ALV EI+AK+
Sbjct: 555 CDVYSFGIVLLEVLSGRLPDAGSENDGKGLECFVRKAFQEERPLTEVIDQALVPEIYAKK 614
Query: 549 QVLATFHIALNCTELDPEFRPRMRTVSESLDRVKLQ 584
QV++ FHIALNCTELDPE RPRMRT+SESLDRVK Q
Sbjct: 615 QVVSMFHIALNCTELDPELRPRMRTISESLDRVKSQ 650
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356503468|ref|XP_003520530.1| PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 659 bits (1699), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/653 (55%), Positives = 441/653 (67%), Gaps = 78/653 (11%)
Query: 1 MLLPLLFFALLLLFPAPLCFSLNQDGLALLALKAAIAQDPTRALDSWSESDSTPCHWSGI 60
++L L+ +L L +P+ SLN DGL+LLALKAA+ DPT L SWSE+D TPCHW GI
Sbjct: 10 VILSLVLRSLYLCL-SPMT-SLNSDGLSLLALKAAVDADPTGVLTSWSETDVTPCHWPGI 67
Query: 61 HCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDL 120
C ++VT L LP +NLTGY+PSELG L SL RLSL NNFS IP +LFNA +L+ LDL
Sbjct: 68 SCTGDKVTQLSLPRKNLTGYIPSELGFLTSLKRLSLPYNNFSNAIPPSLFNARSLIVLDL 127
Query: 121 AHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPE 180
+HNS G +P+++++LK L HLDLS N LNGSLPE L DL +L GTLNLSFN FSG IP
Sbjct: 128 SHNSLSGSLPNQLRSLKFLRHLDLSDNSLNGSLPETLSDLTSLAGTLNLSFNHFSGGIPA 187
Query: 181 MYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGLCGFPLQSPCPEPENPKVH 240
G+ PV VSLDLRNNNL+G+IPQ+G+LLNQGPTAFSGNPGLCGFPLQS CPE + P +
Sbjct: 188 TLGNLPVAVSLDLRNNNLTGKIPQMGTLLNQGPTAFSGNPGLCGFPLQSACPEAQKPGIF 247
Query: 241 ANPEVEDG-PQNPKNTN-FGYSGDVKDRGRNGSVVVSVISGVSVVVGVVSVSVWLFRRKR 298
ANPE DG PQNP + G VK G GSV V VISG+SV VG VS+S+W+FRR+
Sbjct: 248 ANPE--DGFPQNPNALHPDGNYERVKQHG-GGSVAVLVISGLSVAVGAVSLSLWVFRRRW 304
Query: 299 RAREGKMGKEEKTNDAVLVTDEEEGQKGKFFIIDEGFSLELEDLLRASAYVVGKSKNGIM 358
EGK+ K D V D EGQ+GKF ++DEGF LELEDLLRASAYVVGKS++GI+
Sbjct: 305 GGEEGKL-VGPKLEDNV---DAGEGQEGKFVVVDEGFELELEDLLRASAYVVGKSRSGIV 360
Query: 359 YKVV-VGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV--------- 408
YKVV VG+G A VVAVRRL+EGDATWRFK+FESEVEAIARV+HPN+V
Sbjct: 361 YKVVGVGKGLSSAAANVVAVRRLSEGDATWRFKEFESEVEAIARVRHPNVVPLRAYYFAR 420
Query: 409 ----------------------------------RLKAFYYANDEKLLISDF-------- 426
RLK A + I +F
Sbjct: 421 DEKLIITDFIRNGSLHTALHGGPSNSLPPLSWAVRLKIAQEAARGLMYIHEFSGRKYIHG 480
Query: 427 -------IRNGSLYAALHGFGLNRLLPGTSKVTK--------NETIVTSGTGSRISAISN 471
+ + L+ + GFGL RL G +K N++ +T+ S+++A N
Sbjct: 481 NIKSTKILLDDELHPYVSGFGLTRLGLGPTKSATMAPKRNSLNQSSITTAMSSKVAASLN 540
Query: 472 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP 531
YLAPE R G KFTQKCDVYSFGIVLLE+LTGR+PD G END K LES VRKAF+E +P
Sbjct: 541 HYLAPEVRNTGGKFTQKCDVYSFGIVLLELLTGRMPDFGAENDHKVLESFVRKAFKEEKP 600
Query: 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKLQ 584
LS++IDPAL+ E++AK+QV+ FHIALNCTELDPE RPRM+TVSE+LD +K+Q
Sbjct: 601 LSDIIDPALIPEVYAKKQVIVAFHIALNCTELDPELRPRMKTVSENLDHIKIQ 653
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356572062|ref|XP_003554189.1| PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 658 bits (1698), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/650 (56%), Positives = 441/650 (67%), Gaps = 79/650 (12%)
Query: 5 LLFFALLLLFPAPLCFSLNQDGLALLALKAAIAQDPTRALDSWSESDSTPCHWSGIHCIR 64
L+ F + L P P SLN DGL+LLALKAA+ DPT L SWSE+D TPCHW G+ C
Sbjct: 7 LISFLIFSLTPTPTT-SLNSDGLSLLALKAAVDSDPTGVLSSWSETDGTPCHWPGVSCSG 65
Query: 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNS 124
++V+ + LPN+ L+GY+PSELG L SL RLSL NNFS IP +LFNAT+L+ LDL+HNS
Sbjct: 66 DKVSQVSLPNKTLSGYIPSELGFLTSLKRLSLPHNNFSNAIPPSLFNATSLIVLDLSHNS 125
Query: 125 FCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGH 184
G +P +++LK L H+DLS N LNGSLPE L DL +L GTLNLSFN FSG IP G+
Sbjct: 126 LSGSLPTELRSLKFLRHVDLSDNSLNGSLPETLSDLTSLAGTLNLSFNHFSGGIPASLGN 185
Query: 185 FPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGLCGFPLQSPCPEPENPKVHANPE 244
PV VSLDLRNNNL+G+IPQ GSLLNQGPTAFSGNPGLCGFPLQS CPE + P + ANPE
Sbjct: 186 LPVSVSLDLRNNNLTGKIPQKGSLLNQGPTAFSGNPGLCGFPLQSACPEAQKPGIFANPE 245
Query: 245 VEDG-PQNPKNTN-FGYSGDVKDRGRNGSVVVSVISGVSVVVGVVSVSVWLFRRKRRARE 302
DG PQNP + G VK G GSV V VISG+SV VG VS+S+W+FRR+ E
Sbjct: 246 --DGFPQNPNALHPDGNDQRVKQHG-GGSVAVLVISGLSVAVGAVSLSLWVFRRRWGGEE 302
Query: 303 GKMGKEEKTNDAVLVTDEEEGQKGKFFIIDEGFSLELEDLLRASAYVVGKSKNGIMYKVV 362
GK+G + N+ D EGQ+GKF ++DEGF LELEDLLRASAYV+GKS++GI+YKVV
Sbjct: 303 GKLGGPKLENE----VDGGEGQEGKFVVVDEGFELELEDLLRASAYVIGKSRSGIVYKVV 358
Query: 363 -VGRGSG--MGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV----------- 408
VG+GS GA VVAVRRL+EGDATWRFK+FESEVEAIARV+HPN+V
Sbjct: 359 GVGKGSSSAAGAANVVAVRRLSEGDATWRFKEFESEVEAIARVRHPNVVPLRAYYFAHDE 418
Query: 409 --------------------------------RLKAFYYANDEKLLISDF---------- 426
RLK A + I +F
Sbjct: 419 KLLITDFIRNGSLHTALHGGPSNSLPPISWAARLKIAQEAARGLMYIHEFSGRKYIHGNI 478
Query: 427 -----IRNGSLYAALHGFGLNRLLPGTSKVTK--------NETIVTSGTGSRISAISNVY 473
+ + L+ + GFGL RL G +K T N++ +T+ S+++A SN Y
Sbjct: 479 KSTKILLDDELHPYVSGFGLARLGLGPTKSTTMAPKRNSLNQSSITTAISSKVAASSNHY 538
Query: 474 LAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLS 533
LAPE R G KFTQKCDVYSFGIVLLE+LTGR+PD GPEND K LES VRKAF+E +PLS
Sbjct: 539 LAPEVRFTGGKFTQKCDVYSFGIVLLELLTGRMPDFGPENDDKVLESFVRKAFKEEQPLS 598
Query: 534 EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583
++IDPAL+ E++AK+QV+A FHIALNCTELDPE RPRM+TVSESLD +K+
Sbjct: 599 DIIDPALIPEVYAKKQVIAAFHIALNCTELDPELRPRMKTVSESLDHIKI 648
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15230877|ref|NP_191342.1| leucine-rich repeat protein kinase-like protein [Arabidopsis thaliana] gi|6729526|emb|CAB67611.1| receptor-like protein kinase [Arabidopsis thaliana] gi|224589606|gb|ACN59336.1| leucine-rich repeat receptor-like protein kinase [Arabidopsis thaliana] gi|332646186|gb|AEE79707.1| leucine-rich repeat protein kinase-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 635 bits (1639), Expect = e-179, Method: Compositional matrix adjust.
Identities = 346/640 (54%), Positives = 433/640 (67%), Gaps = 83/640 (12%)
Query: 22 LNQDGLALLALKAAIAQDPTRALDSWSESDSTPCHWSGIHCIRNRVTSLYLPNRNLTGYM 81
LN DGL+LLALK+AI +DPTR + SWSESD TPCHW GI C RVTSL L R L+GY+
Sbjct: 25 LNPDGLSLLALKSAILRDPTRVMTSWSESDPTPCHWPGIICTHGRVTSLVLSGRRLSGYI 84
Query: 82 PSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTH 141
PS+LGLL+SL +L LA NNFSKP+P LFNA NL Y+DL+HNS GPIP +I++LKNLTH
Sbjct: 85 PSKLGLLDSLIKLDLARNNFSKPVPTRLFNAVNLRYIDLSHNSISGPIPAQIQSLKNLTH 144
Query: 142 LDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGE 201
+D SSNLLNGSLP+ L L +L GTLNLS+N FSG+IP YG FPV VSLDL +NNL+G+
Sbjct: 145 IDFSSNLLNGSLPQSLTQLGSLVGTLNLSYNSFSGEIPPSYGRFPVFVSLDLGHNNLTGK 204
Query: 202 IPQVGSLLNQGPTAFSGNPGLCGFPLQSPCP-EPENPKVHANPEVEDGPQNPK--NTNFG 258
IPQ+GSLLNQGPTAF+GN LCGFPLQ C E NPK+ A P+ E PK N +F
Sbjct: 205 IPQIGSLLNQGPTAFAGNSELCGFPLQKLCKDEGTNPKLVA-PKPEGSQILPKKPNPSFI 263
Query: 259 YSGDVKDRGRNGSVVVSVISGVSVVVGVVSVSVWLFRRKRRAREGKMGKEEKTNDAVLVT 318
K++ GSV VS+ISGVS+V+G VS+SVWL RRK + + EK N A +
Sbjct: 264 DKDGRKNKPITGSVTVSLISGVSIVIGAVSISVWLIRRKLSS---TVSTPEKNNTAAPLD 320
Query: 319 D--EEEGQKGKFFIIDEGFSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPT--- 373
D +EE ++GKF ++DEGF LELEDLLRASAYVVGKS++GI+Y+VV G GSG A T
Sbjct: 321 DAADEEEKEGKFVVMDEGFELELEDLLRASAYVVGKSRSGIVYRVVAGMGSGTVAATFTS 380
Query: 374 --VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK----------- 420
VVAVRRL++GDATWR KDFE+EVEAI+RVQHPNIVRL+A+YYA DE+
Sbjct: 381 STVVAVRRLSDGDATWRRKDFENEVEAISRVQHPNIVRLRAYYYAEDERLLITDYIRNGS 440
Query: 421 ---------------------LLISDFIRNGSLYAA------------------------ 435
LLI+ G +Y
Sbjct: 441 LYSALHGGPSNTLPSLSWPERLLIAQGTARGLMYIHEYSPRKYVHGNLKSTKILLDDELL 500
Query: 436 --LHGFGLNRLLPGTSKV---------TKNETIVTSGTG-SRISAISNVYLAPEARIY-G 482
+ GFGL RL+ G SK+ + ++T +TS T +RI+A + YLAPEAR G
Sbjct: 501 PRISGFGLTRLVSGYSKLIGSLSATRQSLDQTYLTSATTVTRITAPTVAYLAPEARASSG 560
Query: 483 SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVK 542
K +QKCDVYSFG+VL+E+LTGRLP+A +N+G+ L +VR +E +PLSE++DP ++
Sbjct: 561 CKLSQKCDVYSFGVVLMELLTGRLPNASSKNNGEELVRVVRNWVKEEKPLSEILDPEILN 620
Query: 543 EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582
+ HA +QV+A H+ALNCTE+DPE RPRMR+VSESL R+K
Sbjct: 621 KGHADKQVIAAIHVALNCTEMDPEVRPRMRSVSESLGRIK 660
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 584 | ||||||
| TAIR|locus:2095773 | 662 | AT3G57830 [Arabidopsis thalian | 0.777 | 0.685 | 0.503 | 1.6e-111 | |
| TAIR|locus:2053751 | 646 | AT2G42290 [Arabidopsis thalian | 0.705 | 0.637 | 0.510 | 2.2e-105 | |
| TAIR|locus:2008793 | 719 | AT1G67510 [Arabidopsis thalian | 0.301 | 0.244 | 0.430 | 6.3e-86 | |
| TAIR|locus:2033000 | 702 | AT1G25320 [Arabidopsis thalian | 0.607 | 0.505 | 0.367 | 6.8e-69 | |
| TAIR|locus:2038706 | 716 | AT2G01210 [Arabidopsis thalian | 0.190 | 0.155 | 0.495 | 8.3e-59 | |
| TAIR|locus:2202359 | 670 | AT1G68400 [Arabidopsis thalian | 0.659 | 0.574 | 0.326 | 1.1e-58 | |
| TAIR|locus:2033379 | 685 | AT1G66830 [Arabidopsis thalian | 0.279 | 0.237 | 0.359 | 3.9e-55 | |
| TAIR|locus:2043858 | 658 | AT2G26730 [Arabidopsis thalian | 0.626 | 0.556 | 0.323 | 4.4e-52 | |
| TAIR|locus:2115120 | 768 | AT4G37250 [Arabidopsis thalian | 0.306 | 0.233 | 0.331 | 1.3e-45 | |
| TAIR|locus:2058598 | 773 | AT2G23300 [Arabidopsis thalian | 0.193 | 0.146 | 0.483 | 2.5e-44 |
| TAIR|locus:2095773 AT3G57830 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1101 (392.6 bits), Expect = 1.6e-111, P = 1.6e-111
Identities = 238/473 (50%), Positives = 292/473 (61%)
Query: 21 SLNQDGXXXXXXXXXXXQDPTRALDSWSESDSTPCHWSGIHCIRNRVTSLYLPNRNLTGY 80
SLN DG +DPTR + SWSESD TPCHW GI C RVTSL L R L+GY
Sbjct: 24 SLNPDGLSLLALKSAILRDPTRVMTSWSESDPTPCHWPGIICTHGRVTSLVLSGRRLSGY 83
Query: 81 MPXXXXXXXXXXXXXXXXXXFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLT 140
+P FSKP+P LFNA NL Y+DL+HNS GPIP +I++LKNLT
Sbjct: 84 IPSKLGLLDSLIKLDLARNNFSKPVPTRLFNAVNLRYIDLSHNSISGPIPAQIQSLKNLT 143
Query: 141 HXXXXXXXXXXXXPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSG 200
H P+ L L +L GTLNLS+N FSG+IP YG FPV VSLDL +NNL+G
Sbjct: 144 HIDFSSNLLNGSLPQSLTQLGSLVGTLNLSYNSFSGEIPPSYGRFPVFVSLDLGHNNLTG 203
Query: 201 EIPQVGSLLNQGPTAFSGNPGLCGFPLQSPCP-EPENPKVHANPEVEDGPQNPK--NTNF 257
+IPQ+GSLLNQGPTAF+GN LCGFPLQ C E NPK+ A P+ E PK N +F
Sbjct: 204 KIPQIGSLLNQGPTAFAGNSELCGFPLQKLCKDEGTNPKLVA-PKPEGSQILPKKPNPSF 262
Query: 258 GYSGDVKDRGRNXXXXXXXXXXXXXXXXXXXXXXWLFRRKRRAREGKMGKEEKTNDAVLV 317
K++ WL RRK + + EK N A +
Sbjct: 263 IDKDGRKNKPITGSVTVSLISGVSIVIGAVSISVWLIRRKLSST---VSTPEKNNTAAPL 319
Query: 318 TD--EEEGQKGKFFIIDEGFSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPT-- 373
D +EE ++GKF ++DEGF LELEDLLRASAYVVGKS++GI+Y+VV G GSG A T
Sbjct: 320 DDAADEEEKEGKFVVMDEGFELELEDLLRASAYVVGKSRSGIVYRVVAGMGSGTVAATFT 379
Query: 374 ---VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNG 430
VVAVRRL++GDATWR KDFE+EVEAI+RVQHPNIVRL+A+YYA DE+LLI+D+IRNG
Sbjct: 380 SSTVVAVRRLSDGDATWRRKDFENEVEAISRVQHPNIVRLRAYYYAEDERLLITDYIRNG 439
Query: 431 SLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGS 483
SLY+ALHG G + LP S ++ GT + I Y +P ++G+
Sbjct: 440 SLYSALHG-GPSNTLPSLS--WPERLLIAQGTARGLMYIHE-Y-SPRKYVHGN 487
|
|
| TAIR|locus:2053751 AT2G42290 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1043 (372.2 bits), Expect = 2.2e-105, P = 2.2e-105
Identities = 216/423 (51%), Positives = 263/423 (62%)
Query: 19 CFSLNQDGXXXXXXXXXXXQDPTRALDSWSESDSTPCHWSGIHCIRNRVTSLYLPNRNLT 78
C SLN DG DPTR + WSESD TPCHWSGI C RVT+L L ++L+
Sbjct: 21 CSSLNSDGLSLLALKSAVDNDPTRVMTHWSESDPTPCHWSGIVCTNGRVTTLVLFGKSLS 80
Query: 79 GYMPXXXXXXXXXXXXXXXXXXFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKN 138
GY+P FSK IP LF AT L Y+DL+HNS GPIP +IK++K+
Sbjct: 81 GYIPSELGLLNSLNRLDLAHNNFSKTIPVRLFEATKLRYIDLSHNSLSGPIPAQIKSMKS 140
Query: 139 LTHXXXXXXXXXXXXPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNL 198
L H PE L +L +L GTLN SFNQF+G+IP YG F V VSLD +NNL
Sbjct: 141 LNHLDFSSNHLNGSLPESLTELGSLVGTLNFSFNQFTGEIPPSYGRFRVHVSLDFSHNNL 200
Query: 199 SGEIPQVGSLLNQGPTAFSGNPGLCGFPLQSPCPEPENPK-VHANPEVEDGPQNPKNTNF 257
+G++PQVGSLLNQGP AF+GN LCGFPLQ+PC + + P V A PE Q P N +
Sbjct: 201 TGKVPQVGSLLNQGPNAFAGNSHLCGFPLQTPCEKIKTPNFVAAKPEGTQELQKP-NPSV 259
Query: 258 GYSGDVKDRGRNXXXXXXXXXXXXXXXX--XXXXXXWLFRRKRRAREGKMGKEEKTNDAV 315
+ D K++ + WL RRKR + +G E KT V
Sbjct: 260 ISNDDAKEKKQQITGSVTVSLISGVSVVIGAVSLSVWLIRRKRSS-DG-YNSETKTTTVV 317
Query: 316 LVTDEEEGQKGKFFIIDEGFSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVV 375
DEE GQ+GKF DEGF LELEDLLRASAYV+GKS++GI+Y+VV S TVV
Sbjct: 318 SEFDEE-GQEGKFVAFDEGFELELEDLLRASAYVIGKSRSGIVYRVVAAESSS----TVV 372
Query: 376 AVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAA 435
AVRRL++G+ TWRFKDF +EVE+I R+ HPNIVRL+A+YYA DEKLLI+DFI NGSLY+A
Sbjct: 373 AVRRLSDGNDTWRFKDFVNEVESIGRINHPNIVRLRAYYYAEDEKLLITDFINNGSLYSA 432
Query: 436 LHG 438
LHG
Sbjct: 433 LHG 435
|
|
| TAIR|locus:2008793 AT1G67510 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 327 (120.2 bits), Expect = 6.3e-86, Sum P(3) = 6.3e-86
Identities = 77/179 (43%), Positives = 95/179 (53%)
Query: 69 SLYLPNRNLTGYMPXXXXXXXXXXXXXXXXXXFSKPIPANLFNATNLVYLDLAHNSFCGP 128
S++L NL+G +P S + +L L L L+ N+F G
Sbjct: 124 SIFLYGNNLSGTLPPSICKLPKLQNLDLSMNSLSGTLSPDLNKCKQLQRLILSANNFSGE 183
Query: 129 IPDRI-KTLKNLTHXXXXXXXXXXXXPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPV 187
IP I L NL P+ + +L++L+GTLNLSFN SGQIP G+ PV
Sbjct: 184 IPGDIWPELTNLAQLDLSANEFSGEIPKDIGELKSLSGTLNLSFNHLSGQIPNSLGNLPV 243
Query: 188 MVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGLCGFPLQSPCPEP-EN-PKVHANPE 244
VSLDLRNN+ SGEIPQ GS NQGPTAF NP LCGFPLQ C + EN P +PE
Sbjct: 244 TVSLDLRNNDFSGEIPQSGSFSNQGPTAFLNNPKLCGFPLQKTCKDTDENSPGTRKSPE 302
|
|
| TAIR|locus:2033000 AT1G25320 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 498 (180.4 bits), Expect = 6.8e-69, Sum P(2) = 6.8e-69
Identities = 143/389 (36%), Positives = 198/389 (50%)
Query: 69 SLYLPNRNLTGYMPXXXXXXXXXXXXXXXXXXFSKPIPANLFNATNLVYLDLAHNSFCGP 128
SL L L+G +P + IP ++ L DL+ N+ G
Sbjct: 119 SLVLYGNFLSGSIPNEIGDLKFLQILDLSRNSLNGSIPESVLKCNRLRSFDLSQNNLTGS 178
Query: 129 IPDRI-KTLKNLTHXXXXXXXXXXXXPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPV 187
+P ++L +L P+ L +L L GTL+LS N FSG IP G+ P
Sbjct: 179 VPSGFGQSLASLQKLDLSSNNLIGLVPDDLGNLTRLQGTLDLSHNSFSGSIPASLGNLPE 238
Query: 188 MVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGLCGFPLQSPC-PEPENPKVHANPEVE 246
V ++L NNLSG IPQ G+L+N+GPTAF GNP LCG PL+ PC P+ ++ ++P V
Sbjct: 239 KVYVNLAYNNLSGPIPQTGALVNRGPTAFLGNPRLCGPPLKDPCLPDTDSSST-SHPFV- 296
Query: 247 DGPQNPKNTNFGYSGDVKDRGRNXXXXXXXXXXXXXXXXXXXXXX---WL---FRRKRRA 300
P N G G K G + +L RR
Sbjct: 297 -----PDNNEQGGGGSKKGEGLSKTAIVAIVVCDFIGICIVGFLFSCCYLKICARRNSVD 351
Query: 301 REG----KMGKEEKTN-----DAVLVTDEE--EGQKGKFFIIDEGFSLELEDLLRASAYV 349
EG K GKE+K + D E E Q+ ++D+ +L+L++LL+ASA+V
Sbjct: 352 EEGYVLEKEGKEKKGSFCFRRDGSESPSSENLEPQQD-LVLLDKHIALDLDELLKASAFV 410
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK NGI+YKVV+ G VAVRRL EG + R K+F++EVEAI +++HPNIV
Sbjct: 411 LGKGGNGIVYKVVLEDG------LTVAVRRLGEGGSQ-RCKEFQTEVEAIGKLRHPNIVS 463
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHG 438
LKA+Y++ +EKLLI D+I NGSL ALHG
Sbjct: 464 LKAYYWSVEEKLLIYDYIPNGSLTNALHG 492
|
|
| TAIR|locus:2038706 AT2G01210 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 267 (99.0 bits), Expect = 8.3e-59, Sum P(3) = 8.3e-59
Identities = 59/119 (49%), Positives = 84/119 (70%)
Query: 331 IDEGFSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFK 390
+D + LE+LL+ASA+V+GKS GI+YKVV+ G +AVRRL EG + RFK
Sbjct: 391 LDAQVAFNLEELLKASAFVLGKSGIGIVYKVVLENG------LTLAVRRLGEGGSQ-RFK 443
Query: 391 DFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHGF-GLNRLLPGT 448
+F++EVEAI +++HPNI L+A+Y++ DEKLLI D++ NG+L ALHG G+ + P T
Sbjct: 444 EFQTEVEAIGKLKHPNIASLRAYYWSVDEKLLIYDYVSNGNLATALHGKPGMMTIAPLT 502
|
|
| TAIR|locus:2202359 AT1G68400 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 453 (164.5 bits), Expect = 1.1e-58, Sum P(2) = 1.1e-58
Identities = 138/423 (32%), Positives = 200/423 (47%)
Query: 39 DPTRALDSWSESDSTPCHWSGIHCIRNRVTSLYLPNRNLTGYMPXXXXXXXXXXXXXXXX 98
D T L+SW+ + + PC W+G+ C RNRVT L L + NLTG +
Sbjct: 43 DSTGKLNSWNTT-TNPCQWTGVSCNRNRVTRLVLEDINLTGSI-SSLTSLTSLRVLSLKH 100
Query: 99 XXFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHXXXXXXXXXXXXPEFLL 158
S PIP NL N T L L L++N F G P I +L L P L
Sbjct: 101 NNLSGPIP-NLSNLTALKLLFLSNNQFSGNFPTSITSLTRLYRLDLSFNNFSGQIPPDLT 159
Query: 159 DLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGP-TAFS 217
DL L TL L N+FSGQIP + + + ++ NN +G+IP + L+Q P + F+
Sbjct: 160 DLTHLL-TLRLESNRFSGQIPNI--NLSDLQDFNVSGNNFNGQIP---NSLSQFPESVFT 213
Query: 218 GNPGLCGFPL------QSPCPEPENP-KVHANP--EVEDGPQNPKNTNFGYSGDVKDRGR 268
NP LCG PL S +P P + A+P + E P +P + + G + R
Sbjct: 214 QNPSLCGAPLLKCTKLSSDPTKPGRPDEAKASPLNKPETVPSSPTSIHGGDKSNNTSRIS 273
Query: 269 NXXXXXXXXXXXXXXXXXXXXXXWLFRRK---RRAREGKMGKEEK----TNDAVLVT--- 318
+ F R+ + + K+ + EK +N T
Sbjct: 274 TISLIAIILGDFIILSFVSLLLYYCFWRQYAVNKKKHSKILEGEKIVYSSNPYPTSTQNN 333
Query: 319 ---DEEEGQKGKFFIIDEGFSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVV 375
+++ G KGK + ELEDLLRASA ++GK G YK V+ G+ V
Sbjct: 334 NNQNQQVGDKGKMVFFEGTRRFELEDLLRASAEMLGKGGFGTAYKAVLEDGNE------V 387
Query: 376 AVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAA 435
AV+RL + K+FE ++E + R++H N+V LKA+Y+A +EKLL+ D++ NGSL+
Sbjct: 388 AVKRLKDAVTVAGKKEFEQQMEVLGRLRHTNLVSLKAYYFAREEKLLVYDYMPNGSLFWL 447
Query: 436 LHG 438
LHG
Sbjct: 448 LHG 450
|
|
| TAIR|locus:2033379 AT1G66830 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 246 (91.7 bits), Expect = 3.9e-55, Sum P(3) = 3.9e-55
Identities = 59/164 (35%), Positives = 78/164 (47%)
Query: 69 SLYLPNRNLTGYMPXXXXXXXXXXXXXXXXXXFSKPIPANLFNATNLVYLDLAHNSFCGP 128
SL L + +G++P F+ I +L L L L+ NSF G
Sbjct: 118 SLVLSGNSFSGFVPEEIGSLKSLMTLDLSENSFNGSISLSLIPCKKLKTLVLSKNSFSGD 177
Query: 129 IPDRI-KTLKNLTHXXXXXXXXXXXXPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPV 187
+P + L +L PE + L L GTL+LS N FSG IP G+ P
Sbjct: 178 LPTGLGSNLVHLRTLNLSFNRLTGTIPEDVGSLENLKGTLDLSHNFFSGMIPTSLGNLPE 237
Query: 188 MVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGLCGFPLQSPC 231
++ +DL NNLSG IP+ LLN GP AF GNP LCG P++ C
Sbjct: 238 LLYVDLSYNNLSGPIPKFNVLLNAGPNAFQGNPFLCGLPIKISC 281
|
|
| TAIR|locus:2043858 AT2G26730 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 422 (153.6 bits), Expect = 4.4e-52, Sum P(2) = 4.4e-52
Identities = 135/417 (32%), Positives = 184/417 (44%)
Query: 47 WSESDSTPCHWSGIHCIRNR--VTSLYLPNRNLTGYMPXXXXXXXXXXXXXXXXXX-FSK 103
W+ESDS C+W G+ C N+ + SL LP L G +P S
Sbjct: 47 WNESDSA-CNWVGVECNSNQSSIHSLRLPGTGLVGQIPSGSLGRLTELRVLSLRSNRLSG 105
Query: 104 PIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHXXXXXXXXXXXXPEFLLDLRAL 163
IP++ N T+L L L HN F G P L NL P + +L L
Sbjct: 106 QIPSDFSNLTHLRSLYLQHNEFSGEFPTSFTQLNNLIRLDISSNNFTGSIPFSVNNLTHL 165
Query: 164 TGTLNLSFNQFSGQIPEM-YGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGL 222
TG L L N FSG +P + G +V ++ NNNL+G IP SL +F+GN L
Sbjct: 166 TG-LFLGNNGFSGNLPSISLG----LVDFNVSNNNLNGSIPS--SLSRFSAESFTGNVDL 218
Query: 223 CGFPLQSPCPEPENPKVHANPEVEDGPQNPKNTNFGYSGDVKDRGRNXXXXXXXXXXXXX 282
CG PL+ PC +P NP N K +
Sbjct: 219 CGGPLK-PCKS-----FFVSPSPSPSLINPSNR----LSSKKSKLSKAAIVAIIVASALV 268
Query: 283 XXXXXXXXXWLFRRKRRAREGKMGKEEK-----TNDAVL----------VTDEEEGQKGK 327
+L RKRR K+ K T + L VT G G+
Sbjct: 269 ALLLLALLLFLCLRKRRGSNEARTKQPKPAGVATRNVDLPPGASSSKEEVTGTSSGMGGE 328
Query: 328 F----FIIDEG--FSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLT 381
+ EG +S +LEDLLRASA V+GK G YK V+ G T V V+RL
Sbjct: 329 TERNKLVFTEGGVYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEG------TTVVVKRLK 382
Query: 382 EGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHG 438
+ A+ K+FE+++E + +++HPN++ L+A+YY+ DEKLL+ DF+ GSL A LHG
Sbjct: 383 DVMASK--KEFETQMEVVGKIKHPNVIPLRAYYYSKDEKLLVFDFMPTGSLSALLHG 437
|
|
| TAIR|locus:2115120 AT4G37250 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 248 (92.4 bits), Expect = 1.3e-45, Sum P(3) = 1.3e-45
Identities = 61/184 (33%), Positives = 83/184 (45%)
Query: 21 SLNQDGXXXXXXXXXXXQDPTRALDSWSESDSTPCHWSGIHCIRN-RVTSLYLPNRNLTG 79
+LN DG DP L +W+ +PC W GI C + +V +L LPN L G
Sbjct: 21 ALNSDGLVLMKFKSSVLVDPLSLLQTWNYKHESPCSWRGISCNNDSKVLTLSLPNSQLLG 80
Query: 80 YMPXXXXXXXXXXXXXXXXXXFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNL 139
+P F+ P+P + FNA L +LDL+ N G IP I L NL
Sbjct: 81 SIPSDLGSLLTLQSLDLSNNSFNGPLPVSFFNARELRFLDLSSNMISGEIPSAIGDLHNL 140
Query: 140 THXXXXXXXXXXXXPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLS 199
P L LR LT ++L N FSG+IP G + V+ LDL +N ++
Sbjct: 141 LTLNLSDNALAGKLPTNLASLRNLT-VVSLENNYFSGEIP---GGWRVVEFLDLSSNLIN 196
Query: 200 GEIP 203
G +P
Sbjct: 197 GSLP 200
|
|
| TAIR|locus:2058598 AT2G23300 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 255 (94.8 bits), Expect = 2.5e-44, Sum P(3) = 2.5e-44
Identities = 59/122 (48%), Positives = 79/122 (64%)
Query: 322 EGQKGKFFIIDEGFS-LELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRL 380
E +KG ID G LE+E LL+ASAY++G + + IMYK V+ G TV+AVRRL
Sbjct: 432 ENKKGTLVTIDGGEKELEVETLLKASAYILGATGSSIMYKTVLEDG------TVLAVRRL 485
Query: 381 TEGDATW--RFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHG 438
E + RFKDFE+ + AI ++ HPN+VRL+ FY+ DEKL+I DF+ NGSL A +
Sbjct: 486 GENGLSQQRRFKDFEAHIRAIGKLVHPNLVRLRGFYWGTDEKLVIYDFVPNGSLVNARYR 545
Query: 439 FG 440
G
Sbjct: 546 KG 547
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | GSVIVG00025523001 | SubName- Full=Chromosome chr8 scaffold_34, whole genome shotgun sequence; (640 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 584 | |||
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 8e-40 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 2e-27 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 2e-26 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 8e-20 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 1e-19 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 3e-19 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 1e-18 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 1e-16 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 1e-15 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 2e-15 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 5e-15 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 1e-14 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 1e-13 | |
| pfam08263 | 42 | pfam08263, LRRNT_2, Leucine rich repeat N-terminal | 2e-13 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 3e-13 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 3e-13 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 2e-12 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 6e-12 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 1e-10 | |
| cd05051 | 296 | cd05051, PTKc_DDR, Catalytic domain of the Protein | 2e-10 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 7e-10 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 1e-09 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 3e-09 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 5e-09 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 1e-08 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 5e-08 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 7e-08 | |
| cd05057 | 279 | cd05057, PTKc_EGFR_like, Catalytic domain of Epide | 2e-07 | |
| cd05081 | 284 | cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) | 2e-07 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 2e-07 | |
| cd06630 | 268 | cd06630, STKc_MEKK1, Catalytic domain of the Prote | 4e-07 | |
| cd06620 | 284 | cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of | 5e-07 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 7e-07 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 1e-06 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 2e-06 | |
| cd05065 | 269 | cd05065, PTKc_EphR_B, Catalytic domain of the Prot | 2e-06 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 4e-06 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 4e-06 | |
| cd05044 | 269 | cd05044, PTKc_c-ros, Catalytic domain of the Prote | 5e-06 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 7e-06 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 9e-06 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 9e-06 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 1e-05 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 1e-05 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 1e-05 | |
| cd05053 | 293 | cd05053, PTKc_FGFR, Catalytic domain of the Protei | 1e-05 | |
| cd05066 | 267 | cd05066, PTKc_EphR_A, Catalytic domain of the Prot | 1e-05 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 1e-05 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 1e-05 | |
| cd05073 | 260 | cd05073, PTKc_Hck, Catalytic domain of the Protein | 1e-05 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 2e-05 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 2e-05 | |
| PHA02988 | 283 | PHA02988, PHA02988, hypothetical protein; Provisio | 4e-05 | |
| cd05063 | 268 | cd05063, PTKc_EphR_A2, Catalytic domain of the Pro | 4e-05 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 5e-05 | |
| cd05095 | 296 | cd05095, PTKc_DDR2, Catalytic domain of the Protei | 6e-05 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 7e-05 | |
| cd05064 | 266 | cd05064, PTKc_EphR_A10, Catalytic domain of the Pr | 9e-05 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 9e-05 | |
| cd06621 | 287 | cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of | 1e-04 | |
| cd06917 | 277 | cd06917, STKc_NAK1_like, Catalytic domain of Funga | 1e-04 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 2e-04 | |
| cd05097 | 295 | cd05097, PTKc_DDR_like, Catalytic domain of Discoi | 2e-04 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 2e-04 | |
| cd00116 | 319 | cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribo | 2e-04 | |
| cd06615 | 308 | cd06615, PKc_MEK, Catalytic domain of the dual-spe | 2e-04 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 3e-04 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 3e-04 | |
| cd05094 | 291 | cd05094, PTKc_TrkC, Catalytic domain of the Protei | 3e-04 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 3e-04 | |
| cd05582 | 318 | cd05582, STKc_RSK_N, N-terminal catalytic domain o | 3e-04 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 4e-04 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 5e-04 | |
| cd05090 | 283 | cd05090, PTKc_Ror1, Catalytic domain of the Protei | 5e-04 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 9e-04 | |
| cd05092 | 280 | cd05092, PTKc_TrkA, Catalytic domain of the Protei | 9e-04 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 0.001 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 0.002 | |
| cd05113 | 256 | cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro | 0.002 | |
| cd05572 | 262 | cd05572, STKc_cGK_PKG, Catalytic domain of the Pro | 0.002 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 0.002 | |
| cd05032 | 277 | cd05032, PTKc_InsR_like, Catalytic domain of Insul | 0.002 | |
| cd06619 | 279 | cd06619, PKc_MKK5, Catalytic domain of the dual-sp | 0.002 | |
| cd05096 | 304 | cd05096, PTKc_DDR1, Catalytic domain of the Protei | 0.002 | |
| cd06651 | 266 | cd06651, STKc_MEKK3, Catalytic domain of the Prote | 0.003 | |
| cd05075 | 272 | cd05075, PTKc_Axl, Catalytic domain of the Protein | 0.004 | |
| cd05620 | 316 | cd05620, STKc_nPKC_delta, Catalytic domain of the | 0.004 | |
| cd05055 | 302 | cd05055, PTKc_PDGFR, Catalytic domain of the Prote | 0.004 | |
| cd06629 | 272 | cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o | 0.004 | |
| cd05576 | 237 | cd05576, STKc_RPK118_like, Catalytic domain of the | 0.004 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 0.004 | |
| cd06643 | 282 | cd06643, STKc_SLK, Catalytic domain of the Protein | 0.004 | |
| cd05109 | 279 | cd05109, PTKc_HER2, Catalytic domain of the Protei | 0.004 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 155 bits (393), Expect = 8e-40
Identities = 159/583 (27%), Positives = 246/583 (42%), Gaps = 129/583 (22%)
Query: 67 VTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFC 126
V L + N NL G + S + SL LSLA N F +P + F + L LDL+ N F
Sbjct: 430 VYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLP-DSFGSKRLENLDLSRNQFS 488
Query: 127 GPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFP 186
G +P ++ +L L L LS N L+G +P+ L + L +L+LS NQ SGQIP + P
Sbjct: 489 GAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLV-SLDLSHNQLSGQIPASFSEMP 547
Query: 187 VMVSLDLRNNNLSGEIP----------QV--------GSLLNQG------PTAFSGNPGL 222
V+ LDL N LSGEIP QV GSL + G +A +GN L
Sbjct: 548 VLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDL 607
Query: 223 CGFPLQS---PCPEPENPKVHANPEVEDGPQNPKNTNFGYSGDVKDRGRNGSVVVSVISG 279
CG S PC +V P + ++ G
Sbjct: 608 CGGDTTSGLPPC-----KRVRKTP-------------------------SWWFYITCTLG 637
Query: 280 VSVVVGVVSVSVWLFRRKRRAREGKMGKEEKTNDAVLVTDEEEGQKGKFFIIDEGFSLEL 339
+V+ +V+ ++F R R E K V +E+ + +FF S+ +
Sbjct: 638 AFLVLALVA-FGFVFIRGRNNLELKR-----------VENEDGTWELQFFDSKVSKSITI 685
Query: 340 EDLLRA--SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVE 397
D+L + V+ + K G YK G + V+ + + ++ SE+
Sbjct: 686 NDILSSLKEENVISRGKKGASYK-----GKSIKNGMQFVVKEINDVNSI-----PSSEIA 735
Query: 398 AIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHGFGLNR---LLPGTSKVTK- 453
+ ++QHPNIV+L + LI ++I +L L R + G +K +
Sbjct: 736 DMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRNLSWERRRKIAIGIAKALRF 795
Query: 454 ---------------NETIVTSGTGS---RIS-----------AISNVYLAPEARIYGSK 484
E I+ G R+S IS+ Y+APE R
Sbjct: 796 LHCRCSPAVVVGNLSPEKIIIDGKDEPHLRLSLPGLLCTDTKCFISSAYVAPETR-ETKD 854
Query: 485 FTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEV-----IDPA 539
T+K D+Y FG++L+E+LTG+ P A E G S+V A R S+ IDP+
Sbjct: 855 ITEKSDIYGFGLILIELLTGKSP-ADAEFGVHG--SIVEWA---RYCYSDCHLDMWIDPS 908
Query: 540 LVKEIHA-KRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
+ ++ + +++ ++AL+CT DP RP V ++L+
Sbjct: 909 IRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESA 951
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 117 bits (295), Expect = 2e-27
Identities = 80/231 (34%), Positives = 121/231 (52%), Gaps = 31/231 (13%)
Query: 4 PLLFFALLLLFPAPLCFSLNQDGLALLALKAAIAQDPTRALDSWSESDSTPCHWSGIHCI 63
P L F L LF + L LL+ K++I DP + L +W+ S + C W GI C
Sbjct: 10 PYLIFMLFFLFLNFSMLHAEELEL-LLSFKSSI-NDPLKYLSNWNSS-ADVCLWQGITCN 66
Query: 64 R-NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFN-ATNLVYLDLA 121
+RV S+ L +N++G + S + L + ++L++N S PIP ++F +++L YL+L+
Sbjct: 67 NSSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLS 126
Query: 122 HNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFL--------LDL--RALTGT----- 166
+N+F G IP ++ NL LDLS+N+L+G +P + LDL L G
Sbjct: 127 NNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSL 184
Query: 167 --------LNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIP-QVGSL 208
L L+ NQ GQIP G + + L NNLSGEIP ++G L
Sbjct: 185 TNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGL 235
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 114 bits (287), Expect = 2e-26
Identities = 60/135 (44%), Positives = 80/135 (59%), Gaps = 1/135 (0%)
Query: 70 LYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPI 129
+YL NL+G +P E+G L SL L L NN + PIP++L N NL YL L N GPI
Sbjct: 217 IYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPI 276
Query: 130 PDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMV 189
P I +L+ L LDLS N L+G +PE ++ L+ L L+L N F+G+IP P +
Sbjct: 277 PPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLE-ILHLFSNNFTGKIPVALTSLPRLQ 335
Query: 190 SLDLRNNNLSGEIPQ 204
L L +N SGEIP+
Sbjct: 336 VLQLWSNKFSGEIPK 350
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 93.4 bits (232), Expect = 8e-20
Identities = 54/134 (40%), Positives = 77/134 (57%), Gaps = 1/134 (0%)
Query: 70 LYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPI 129
L L + L G +P ELG + SL + L NN S IP + T+L +LDL +N+ GPI
Sbjct: 193 LTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPI 252
Query: 130 PDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMV 189
P + LKNL +L L N L+G +P + L+ L +L+LS N SG+IPE+ +
Sbjct: 253 PSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLI-SLDLSDNSLSGEIPELVIQLQNLE 311
Query: 190 SLDLRNNNLSGEIP 203
L L +NN +G+IP
Sbjct: 312 ILHLFSNNFTGKIP 325
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 93.0 bits (231), Expect = 1e-19
Identities = 53/129 (41%), Positives = 72/129 (55%), Gaps = 1/129 (0%)
Query: 77 LTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTL 136
L G +P+ L L SL L+LASN IP L +L ++ L +N+ G IP I L
Sbjct: 176 LVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGL 235
Query: 137 KNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNN 196
+L HLDL N L G +P L +L+ L L L N+ SG IP ++SLDL +N
Sbjct: 236 TSLNHLDLVYNNLTGPIPSSLGNLKNLQ-YLFLYQNKLSGPIPPSIFSLQKLISLDLSDN 294
Query: 197 NLSGEIPQV 205
+LSGEIP++
Sbjct: 295 SLSGEIPEL 303
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 91.8 bits (228), Expect = 3e-19
Identities = 58/157 (36%), Positives = 81/157 (51%), Gaps = 9/157 (5%)
Query: 70 LYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPI 129
L+L + N TG +P L L L L L SN FS IP NL NL LDL+ N+ G I
Sbjct: 313 LHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEI 372
Query: 130 PDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMV 189
P+ + + NL L L SN L G +P+ L R+L + L N FSG++P + P++
Sbjct: 373 PEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLR-RVRLQDNSFSGELPSEFTKLPLVY 431
Query: 190 SLDLRNNNLSG-------EIPQVGSLLNQGPTAFSGN 219
LD+ NNNL G ++P + +L+ F G
Sbjct: 432 FLDISNNNLQGRINSRKWDMPSL-QMLSLARNKFFGG 467
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 89.5 bits (222), Expect = 1e-18
Identities = 53/143 (37%), Positives = 73/143 (51%), Gaps = 4/143 (2%)
Query: 62 CIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVY-LDL 120
C + L L + +L G +P LG SL R+ L N+FS +P+ F LVY LD+
Sbjct: 377 CSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSE-FTKLPLVYFLDI 435
Query: 121 AHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPE 180
++N+ G I R + +L L L+ N G LP+ R L+LS NQFSG +P
Sbjct: 436 SNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGSKR--LENLDLSRNQFSGAVPR 493
Query: 181 MYGHFPVMVSLDLRNNNLSGEIP 203
G ++ L L N LSGEIP
Sbjct: 494 KLGSLSELMQLKLSENKLSGEIP 516
|
Length = 968 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 79.9 bits (198), Expect = 1e-16
Identities = 61/261 (23%), Positives = 94/261 (36%), Gaps = 70/261 (26%)
Query: 365 RGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424
+G G G T VAV+ L EG + ++F E + ++ HPNIVRL + +++
Sbjct: 21 KGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNIVRLLGVCTQGEPLYIVT 80
Query: 425 DFIRNGSLYAALH----GFGLNRLL----------------------------------- 445
+++ G L L L LL
Sbjct: 81 EYMPGGDLLDFLRKHGEKLTLKDLLQMALQIAKGMEYLESKNFVHRDLAARNCLVTENLV 140
Query: 446 -----PGTSKVTKNETIVTSGTGSRISAISNV-YLAPEARIYGSKFTQKCDVYSFGIVLL 499
G S+ + G ++ + ++APE+ + KFT K DV+SFG++L
Sbjct: 141 VKISDFGLSRDIYEDDYYRKRGGGKL----PIKWMAPES-LKDGKFTSKSDVWSFGVLLW 195
Query: 500 EILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALV-KEIHAKRQVLATFHIA 557
EI T G P G N V + + L P E++ +
Sbjct: 196 EIFTLGEQPYPGMSN------EEVLELLEDGYRLPR---PENCPDELY---------ELM 237
Query: 558 LNCTELDPEFRPRMRTVSESL 578
L C DPE RP + E L
Sbjct: 238 LQCWAYDPEDRPTFSELVEDL 258
|
Length = 258 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 76.9 bits (190), Expect = 1e-15
Identities = 48/199 (24%), Positives = 79/199 (39%), Gaps = 59/199 (29%)
Query: 362 VVGRGSG--------MGAPTVVAVRRL-TEGDATWRFKDFESEVEAIARVQHPNIVRLKA 412
+G GS G +VAV+ L + + + + E+ + R+ HPNIVRL
Sbjct: 6 KLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLID 65
Query: 413 FYYANDEKLLISDFIRNGSLY-------------------------AALHGFGL------ 441
+ D L+ ++ G L+ LH G+
Sbjct: 66 AFEDKDHLYLVMEYCEGGDLFDYLSRGGPLSEDEAKKIALQILRGLEYLHSNGIIHRDLK 125
Query: 442 --NRLL--PGTSKVT---------KNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQK 488
N LL G K+ K+ + +T+ G+ Y+APE + G+ + K
Sbjct: 126 PENILLDENGVVKIADFGLAKKLLKSSSSLTTFVGTP------WYMAPEVLLGGNGYGPK 179
Query: 489 CDVYSFGIVLLEILTGRLP 507
DV+S G++L E+LTG+ P
Sbjct: 180 VDVWSLGVILYELLTGKPP 198
|
Length = 260 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 79.9 bits (197), Expect = 2e-15
Identities = 52/139 (37%), Positives = 73/139 (52%), Gaps = 1/139 (0%)
Query: 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSF 125
++ SL L + +L+G +P + L +L L L SNNF+ IP L + L L L N F
Sbjct: 285 KLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKF 344
Query: 126 CGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHF 185
G IP + NLT LDLS+N L G +PE L L L L N G+IP+ G
Sbjct: 345 SGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLF-KLILFSNSLEGEIPKSLGAC 403
Query: 186 PVMVSLDLRNNNLSGEIPQ 204
+ + L++N+ SGE+P
Sbjct: 404 RSLRRVRLQDNSFSGELPS 422
|
Length = 968 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 77.9 bits (192), Expect = 5e-15
Identities = 43/116 (37%), Positives = 64/116 (55%), Gaps = 3/116 (2%)
Query: 118 LDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQ 177
L L + G IP+ I L++L ++LS N + G++P L + +L L+LS+N F+G
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLE-VLDLSYNSFNGS 481
Query: 178 IPEMYGHFPVMVSLDLRNNNLSGEIPQV--GSLLNQGPTAFSGNPGLCGFPLQSPC 231
IPE G + L+L N+LSG +P G LL++ F+ N GLCG P C
Sbjct: 482 IPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPGLRAC 537
|
Length = 623 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 77.2 bits (190), Expect = 1e-14
Identities = 55/153 (35%), Positives = 74/153 (48%), Gaps = 25/153 (16%)
Query: 76 NLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNS----------- 124
NLTG +PS LG L +L L L N S PIP ++F+ L+ LDL+ NS
Sbjct: 247 NLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQ 306
Query: 125 -------------FCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSF 171
F G IP + +L L L L SN +G +P+ L LT L+LS
Sbjct: 307 LQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLT-VLDLST 365
Query: 172 NQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ 204
N +G+IPE + L L +N+L GEIP+
Sbjct: 366 NNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPK 398
|
Length = 968 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 71.0 bits (175), Expect = 1e-13
Identities = 37/177 (20%), Positives = 71/177 (40%), Gaps = 50/177 (28%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLY 433
+VA++ + + + E++ + +++HPNIVRL + D+ L+ ++ G L+
Sbjct: 26 LVAIKVIKKKKIKKDRERILREIKILKKLKHPNIVRLYDVFEDEDKLYLVMEYCEGGDLF 85
Query: 434 -------------------------AALHGFGL--------NRLLP----------GTSK 450
LH G+ N LL G ++
Sbjct: 86 DLLKKRGRLSEDEARFYLRQILSALEYLHSKGIVHRDLKPENILLDEDGHVKLADFGLAR 145
Query: 451 VTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 507
+T+ G+ Y+APE + G + + D++S G++L E+LTG+ P
Sbjct: 146 QLDPGEKLTTFVGTPE------YMAPE-VLLGKGYGKAVDIWSLGVILYELLTGKPP 195
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|219766 pfam08263, LRRNT_2, Leucine rich repeat N-terminal domain | Back alignment and domain information |
|---|
Score = 64.3 bits (157), Expect = 2e-13
Identities = 21/41 (51%), Positives = 28/41 (68%)
Query: 22 LNQDGLALLALKAAIAQDPTRALDSWSESDSTPCHWSGIHC 62
LN D ALLA K+++ DP+ AL SW+ S S PC W+G+ C
Sbjct: 1 LNDDRDALLAFKSSLNGDPSGALSSWNPSSSDPCSWTGVTC 41
|
Leucine Rich Repeats pfam00560 are short sequence motifs present in a number of proteins with diverse functions and cellular locations. Leucine Rich Repeats are often flanked by cysteine rich domains. This domain is often found at the N-terminus of tandem leucine rich repeats. Length = 42 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 72.6 bits (178), Expect = 3e-13
Identities = 48/141 (34%), Positives = 73/141 (51%), Gaps = 2/141 (1%)
Query: 64 RNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHN 123
N +T L L NLTG +P L +L +L L SN+ IP +L +L + L N
Sbjct: 355 HNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDN 414
Query: 124 SFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYG 183
SF G +P L + LD+S+N L G + D+ +L L+L+ N+F G +P+ +G
Sbjct: 415 SFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQ-MLSLARNKFFGGLPDSFG 473
Query: 184 HFPVMVSLDLRNNNLSGEIPQ 204
+ +LDL N SG +P+
Sbjct: 474 S-KRLENLDLSRNQFSGAVPR 493
|
Length = 968 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 69.5 bits (171), Expect = 3e-13
Identities = 64/276 (23%), Positives = 101/276 (36%), Gaps = 89/276 (32%)
Query: 360 KVVVG--RGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR-------- 409
+V G +G G VAV+ L E + + ++F E + ++ HPN+V+
Sbjct: 14 EVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNVVKLLGVCTEE 73
Query: 410 --------------LKAFYYANDEKLLISDFIR------NGSLYAALHG----------- 438
L ++ N KL +SD + G Y L
Sbjct: 74 EPLYIVMEYMEGGDLLSYLRKNRPKLSLSDLLSFALQIARGMEY--LESKNFIHRDLAAR 131
Query: 439 --------------FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNV-YLAPEARIYGS 483
FGL+R L K G ++ + ++APE+ G
Sbjct: 132 NCLVGENLVVKISDFGLSRDLYDDDYYRK--------RGGKL----PIRWMAPESLKEG- 178
Query: 484 KFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVK 542
KFT K DV+SFG++L EI T G P G N + + ++ +R +P + P +
Sbjct: 179 KFTSKSDVWSFGVLLWEIFTLGEQPYPGMSN--EEVLEYLKNGYRLPQPPN---CPPEL- 232
Query: 543 EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 578
+ + L C DPE RP + E L
Sbjct: 233 -----------YDLMLQCWAEDPEDRPTFSELVEIL 257
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 66.5 bits (163), Expect = 2e-12
Identities = 36/192 (18%), Positives = 68/192 (35%), Gaps = 64/192 (33%)
Query: 362 VVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKL 421
V VA++ + + D++ ++ E+E + ++ HPNIV+L + +
Sbjct: 8 TVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLY 67
Query: 422 LISDFIRNGSLY--------------------------AALH------------------ 437
L+ ++ GSL LH
Sbjct: 68 LVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDS 127
Query: 438 --------GFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKC 489
FGL++LL + K GT + Y+APE + +++K
Sbjct: 128 DNGKVKLADFGLSKLLTSDKSLLKT----IVGTPA--------YMAPEVLLGKGYYSEKS 175
Query: 490 DVYSFGIVLLEI 501
D++S G++L E+
Sbjct: 176 DIWSLGVILYEL 187
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 65.8 bits (161), Expect = 6e-12
Identities = 65/262 (24%), Positives = 101/262 (38%), Gaps = 88/262 (33%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
T VAV+ L G T + F E + + +++H +V+L A + ++++++ GSL
Sbjct: 31 TKVAVKTLKPG--TMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSKGSL 88
Query: 433 YAALHG----------------------------------------------------FG 440
L FG
Sbjct: 89 LDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFG 148
Query: 441 LNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLE 500
L RL+ + T+ G++ I + APEA YG +FT K DV+SFGI+L E
Sbjct: 149 LARLI--------EDDEYTAREGAKFP-IK--WTAPEAANYG-RFTIKSDVWSFGILLTE 196
Query: 501 ILT-GRLPDAGPENDGKGLESL--VRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIA 557
I+T GR+P G N E L V + +R RP P +E++ +
Sbjct: 197 IVTYGRVPYPGMTNR----EVLEQVERGYRMPRP------PNCPEELY---------DLM 237
Query: 558 LNCTELDPEFRPRMRTVSESLD 579
L C + DPE RP + L+
Sbjct: 238 LQCWDKDPEERPTFEYLQSFLE 259
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 62.1 bits (151), Expect = 1e-10
Identities = 63/260 (24%), Positives = 101/260 (38%), Gaps = 84/260 (32%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
T VAV+ L G T KDF +E + + +++HP +++L A + ++++ ++ GSL
Sbjct: 31 TPVAVKTLKPG--TMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKYGSL 88
Query: 433 YAALHG----------------------------------------------------FG 440
L G FG
Sbjct: 89 LEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFG 148
Query: 441 LNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLE 500
L R++ E I + G++ + APEA +Y ++F+ K DV+SFGI+L E
Sbjct: 149 LARVI--------KEDIYEAREGAKFPI---KWTAPEAALY-NRFSIKSDVWSFGILLTE 196
Query: 501 ILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALN 559
I+T GR+P G N E L + R P L + I L+
Sbjct: 197 IVTYGRMPYPGMTN----AEVLQQVDQGYRMPCPPGCPKEL-------------YDIMLD 239
Query: 560 CTELDPEFRPRMRTVSESLD 579
C + DP+ RP T+ L+
Sbjct: 240 CWKEDPDDRPTFETLQWKLE 259
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Score = 61.6 bits (150), Expect = 2e-10
Identities = 58/287 (20%), Positives = 91/287 (31%), Gaps = 87/287 (30%)
Query: 359 YKVVVGRGSGM-GAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN 417
+ + AP +VAV+ L + +DF EV+ ++R+ PNI RL +
Sbjct: 32 FSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLLGVCTVD 91
Query: 418 DEKLLISDFIRNGSL------YAALHGF---GLNRLLPGTSK------------------ 450
+I +++ NG L + A L T
Sbjct: 92 PPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNF 151
Query: 451 -----------VTKNETIVTSGTGSRISAISNVYLAPEAR------------IYGSKFTQ 487
V KN TI + G + S+ Y + R + KFT
Sbjct: 152 VHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTT 211
Query: 488 KCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIH-- 545
K DV++FG+ L EILT +P + D +++
Sbjct: 212 KSDVWAFGVTLWEILT----------------------LCREQPYEHLTDQQVIENAGHF 249
Query: 546 ---AKRQVL---------ATFHIALNCTELDPEFRPRMRTVSESLDR 580
RQ+ + + L C D E RP R + L R
Sbjct: 250 FRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 59.8 bits (145), Expect = 7e-10
Identities = 60/246 (24%), Positives = 102/246 (41%), Gaps = 60/246 (24%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++ L D + +DF+ EV+A+ R++H +++ L A + +I++ + GSL A
Sbjct: 33 VAIKILKS-DDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEKGSLLA 91
Query: 435 AL-----HGFGLNRLL-------PGTSKVTKNETI----------VTSGTGSRISAI--- 469
L + L+ G + + + +I V +++
Sbjct: 92 FLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLA 151
Query: 470 ----SNVYL-----------APEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPEN 513
+VYL APEA +G F+ K DV+SFGI+L E+ T G++P G N
Sbjct: 152 RLIKEDVYLSSDKKIPYKWTAPEAASHG-TFSTKSDVWSFGILLYEMFTYGQVPYPGMNN 210
Query: 514 DGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRT 573
+ + +R P +EI+ I L C +PE RP +
Sbjct: 211 --HEVYDQITAGYRMPCP------AKCPQEIY---------KIMLECWAAEPEDRPSFKA 253
Query: 574 VSESLD 579
+ E LD
Sbjct: 254 LREELD 259
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 59.1 bits (144), Expect = 1e-09
Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 19/107 (17%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
++APE+ G KFT K DV+SFG++L EI T G P G N + ++K +R +P
Sbjct: 170 WMAPESLKEG-KFTSKSDVWSFGVLLWEIFTLGEEPYPGMSN--AEVLEYLKKGYRLPKP 226
Query: 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 578
+ P + + + L C DPE RP + E L
Sbjct: 227 PN---CPPEL------------YKLMLQCWAEDPEDRPTFSELVEIL 258
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 57.6 bits (140), Expect = 3e-09
Identities = 60/262 (22%), Positives = 106/262 (40%), Gaps = 66/262 (25%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPT--VVAVRRL-TEGDATWRFKDFESEVEAIARVQHP 405
++G+ G++YK G+ T VA++++ E K E++ + ++HP
Sbjct: 7 LIGRGAFGVVYK-------GLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHP 59
Query: 406 NIVRLKAFYYANDEKLLISDFIRNGSLYAALHGFG----------LNRLLPG-----TSK 450
NIV+ +D +I ++ NGSL + FG + ++L G
Sbjct: 60 NIVKYIGSIETSDSLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQG 119
Query: 451 V------------TKNETIVTS--GTGSRISAISNV---------YLAPEARIYGSKFTQ 487
V TK+ + + G ++++ +S ++APE I S +
Sbjct: 120 VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEV-IEMSGAST 178
Query: 488 KCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAK 547
D++S G ++E+LTG P P D + +L R + PL E I P L
Sbjct: 179 ASDIWSLGCTVIELLTGN-P---PYYDLNPMAALFRIVQDDHPPLPEGISPEL------- 227
Query: 548 RQVLATFHIALNCTELDPEFRP 569
+ L + C + DP RP
Sbjct: 228 KDFL------MQCFQKDPNLRP 243
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 58.1 bits (140), Expect = 5e-09
Identities = 50/162 (30%), Positives = 71/162 (43%), Gaps = 4/162 (2%)
Query: 74 NRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRI 133
N N SEL L +LT L L +NN + P +NL LDL+ N +P +
Sbjct: 101 NLNRLRSNISELLELTNLTSLDLDNNNITDIPPLIGLLKSNLKELDLSDNKIE-SLPSPL 159
Query: 134 KTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDL 193
+ L NL +LDLS N L+ LP+ L +L L L+LS N+ S +P + LDL
Sbjct: 160 RNLPNLKNLDLSFNDLS-DLPKLLSNLSNLN-NLDLSGNKIS-DLPPEIELLSALEELDL 216
Query: 194 RNNNLSGEIPQVGSLLNQGPTAFSGNPGLCGFPLQSPCPEPE 235
NN++ + + +L N S N E
Sbjct: 217 SNNSIIELLSSLSNLKNLSGLELSNNKLEDLPESIGNLSNLE 258
|
Length = 394 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 56.2 bits (136), Expect = 1e-08
Identities = 45/170 (26%), Positives = 69/170 (40%), Gaps = 42/170 (24%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++ L G + + DF +E + + HPNI+RL+ + ++I++++ NGSL
Sbjct: 35 VAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITEYMENGSLDK 94
Query: 435 AL-------HGFGLNRLLPGTSK---------------------VTKNETIVTSGTG-SR 465
L L +L G + V N S G SR
Sbjct: 95 FLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSR 154
Query: 466 I------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT 503
I + APEA Y KFT DV+SFGIV+ E+++
Sbjct: 155 RLEDSEATYTTKGGKIPIRWTAPEAIAYR-KFTSASDVWSFGIVMWEVMS 203
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 54.1 bits (131), Expect = 5e-08
Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 19/108 (17%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
++APE+ + FT K DV+SFG++L EI T G P G N+ + +RK +R +P
Sbjct: 173 WMAPES-LKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNE--EVLEYLRKGYRLPKP 229
Query: 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579
+ ++ + + L+C +LDPE RP + E L+
Sbjct: 230 ------------EYCPDEL---YELMLSCWQLDPEDRPTFSELVERLE 262
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 53.9 bits (130), Expect = 7e-08
Identities = 59/265 (22%), Positives = 94/265 (35%), Gaps = 73/265 (27%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK--LLISDFIRNGS 431
VAV+ L DFE E+E + + H NIV+ K + LI +++ +GS
Sbjct: 35 QVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIMEYLPSGS 94
Query: 432 LYAALHG----FGLNRLLPGTSKVTKN-ETIVTSGTGSRISAISNVYL------------ 474
L L L RLL +S++ K + + + R A N+ +
Sbjct: 95 LRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFG 154
Query: 475 -------------------------APEARIYGSKFTQKCDVYSFGIVLLEILT-GR--- 505
APE + SKF+ DV+SFG+ L E+ T G
Sbjct: 155 LAKVLPEDKDYYYVKEPGESPIFWYAPEC-LRTSKFSSASDVWSFGVTLYELFTYGDPSQ 213
Query: 506 ------LPDAGPENDGKGLESLVR---KAFRERRPLSEVIDPALVKEIHAKRQVLATFHI 556
L G + L+ + R RP P+ E++ +
Sbjct: 214 SPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRP------PSCPDEVY---------DL 258
Query: 557 ALNCTELDPEFRPRMRTVSESLDRV 581
C E +P+ RP + +DR+
Sbjct: 259 MKLCWEAEPQDRPSFADLILIVDRL 283
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 52.4 bits (126), Expect = 2e-07
Identities = 59/283 (20%), Positives = 98/283 (34%), Gaps = 80/283 (28%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+G G +YK V G VA++ L E + K+ E +A V HP++V
Sbjct: 14 VLGSGAFGTVYKGV-WIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVV 72
Query: 409 RL---------------------------------------------KAFYYANDEKLLI 423
RL K Y +++L+
Sbjct: 73 RLLGICLSSQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVH 132
Query: 424 SDFI-RNGSLYAALH----GFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEA 478
D RN + H FGL +LL K E G ++ ++A E+
Sbjct: 133 RDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAE-------GGKVPI---KWMALES 182
Query: 479 RIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVID 537
++ +T K DV+S+G+ + E++T G P G + L+ K R +P ID
Sbjct: 183 ILHR-IYTHKSDVWSYGVTVWELMTFGAKPYEGI--PAVEIPDLLEKGERLPQPPICTID 239
Query: 538 PALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580
+ + + C +D E RP + + +
Sbjct: 240 ---------------VYMVLVKCWMIDAESRPTFKELINEFSK 267
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279 |
| >gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 52.5 bits (126), Expect = 2e-07
Identities = 66/266 (24%), Positives = 101/266 (37%), Gaps = 73/266 (27%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAF-YYANDEKL-LISDFIRNGS 431
VVAV++L A +DFE E+E + +QH NIV+ K Y A L L+ +++ GS
Sbjct: 35 VVAVKKLQHSTAE-HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGS 93
Query: 432 LYAAL----HGFGLNRLLPGTSKVTKN-ETIVTSGTGSRISAISNVYLAPEARI----YG 482
L L +LL S++ K E + + R A N+ + E R+ +G
Sbjct: 94 LRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFG 153
Query: 483 --------------------------------SKFTQKCDVYSFGIVLLEILT----GRL 506
SKF+ DV+SFG+VL E+ T
Sbjct: 154 LTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCS 213
Query: 507 PDA------GPENDGKG----LESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHI 556
P A G + G+ L L++ R P P EI+A I
Sbjct: 214 PPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAP------PGCPAEIYA---------I 258
Query: 557 ALNCTELDPEFRPRMRTVSESLDRVK 582
C DP RP ++ ++ ++
Sbjct: 259 MKECWNNDPSQRPSFSELALQVEAIR 284
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 52.2 bits (125), Expect = 2e-07
Identities = 52/183 (28%), Positives = 83/183 (45%), Gaps = 46/183 (25%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
T VA++ L +G + + F +E + ++QHP +VRL A + +I++++ NGSL
Sbjct: 31 TKVAIKSLKQG--SMSPEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIITEYMENGSL 87
Query: 433 YAAL-----HGFGLNRLLPGTSKVT--------KN---------ETIVTSGTGSRISAI- 469
L +N+L+ +++ KN +V+ +I+
Sbjct: 88 VDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFG 147
Query: 470 ------SNVYLA------------PEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG 510
N Y A PEA YG+ FT K DV+SFGI+L EI+T GR+P G
Sbjct: 148 LARLIEDNEYTAREGAKFPIKWTAPEAINYGT-FTIKSDVWSFGILLTEIVTYGRIPYPG 206
Query: 511 PEN 513
N
Sbjct: 207 MTN 209
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 51.4 bits (123), Expect = 4e-07
Identities = 59/254 (23%), Positives = 98/254 (38%), Gaps = 60/254 (23%)
Query: 363 VGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLL 422
V G+ M V VR T + + E+ +AR+ HP+I+R+ + L
Sbjct: 22 VKTGTLMAVKQVTYVRN-TSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80
Query: 423 ISDFIRNGSLYAALHGFG----------LNRLLPGTSKVTKNE---------TIVTSGTG 463
+++ GS+ L +G +LL G S + +N+ ++ TG
Sbjct: 81 FVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTG 140
Query: 464 SRI------SAI------------------SNVYLAPEARIYGSKFTQKCDVYSFGIVLL 499
R+ +A + ++APE + G ++ + CDV+S G V++
Sbjct: 141 QRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEV-LRGEQYGRSCDVWSVGCVII 199
Query: 500 EILTGRLPDAGPENDGKGLESLVRKAFRERRP-LSEVIDPALVKEIHAKRQVLATFHIAL 558
E+ T + P E L + + A P + E + P L R V L
Sbjct: 200 EMATAKPP-WNAEKHSNHLALIFKIASATTAPSIPEHLSPGL-------RDVT------L 245
Query: 559 NCTELDPEFRPRMR 572
C EL PE RP R
Sbjct: 246 RCLELQPEDRPPSR 259
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268 |
| >gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 51.3 bits (123), Expect = 5e-07
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 7/62 (11%)
Query: 462 TGSRISAISN------VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDG 515
+G I++I++ Y++PE RI G K+T K DV+S GI ++E+ G+ P A D
Sbjct: 151 SGELINSIADTFVGTSTYMSPE-RIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDD 209
Query: 516 KG 517
G
Sbjct: 210 DG 211
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 50.6 bits (122), Expect = 7e-07
Identities = 44/200 (22%), Positives = 79/200 (39%), Gaps = 58/200 (29%)
Query: 362 VVGRGS------GMGAPT--VVAVRRL-TEGDATWRFKDFESEVEAIARVQHPNIVRLKA 412
++GRGS + T ++AV+ + GD+ + E E+ ++ +QHPNIVR
Sbjct: 7 LLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYG 66
Query: 413 FYYANDEK--LLISDFIRNGSLYAALHGFGL----------------------------- 441
++ + +++ GSL + L FG
Sbjct: 67 SERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRD 126
Query: 442 ----NRLLP----------GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQ 487
N L+ G +K + GTGS + ++APE I G ++ +
Sbjct: 127 IKGANILVDSDGVVKLADFGCAKR-LGDIETGEGTGSVRG--TPYWMAPEV-IRGEEYGR 182
Query: 488 KCDVYSFGIVLLEILTGRLP 507
D++S G ++E+ TG+ P
Sbjct: 183 AADIWSLGCTVIEMATGKPP 202
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 49.6 bits (118), Expect = 1e-06
Identities = 73/283 (25%), Positives = 110/283 (38%), Gaps = 90/283 (31%)
Query: 341 DLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIA 400
++ R S ++ K NG +V +G +G T VAV+ L G T + F E + +
Sbjct: 2 EIPRESLQLIKKLGNGQFGEVWMGTWNGN---TKVAVKTLKPG--TMSPESFLEEAQIMK 56
Query: 401 RVQHPNIVRLKAFY----------YANDEKLLISDFIRNG-------------------- 430
+++H +V+L A Y + LL DF+++G
Sbjct: 57 KLRHDKLVQLYAVVSEEPIYIVTEYMSKGSLL--DFLKDGEGRALKLPNLVDMAAQVAAG 114
Query: 431 -----------------------SLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRIS 467
L + FGL RL + NE G I
Sbjct: 115 MAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARL------IEDNEYTARQGAKFPIK 168
Query: 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAF 526
+ APEA +YG +FT K DV+SFGI+L E++T GR+P G N+ + LE + R
Sbjct: 169 -----WTAPEAALYG-RFTIKSDVWSFGILLTELVTKGRVPYPG-MNNREVLEQVERGY- 220
Query: 527 RERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRP 569
R P + +L + L C + DPE RP
Sbjct: 221 --RMPCPQDCPISL-------------HELMLQCWKKDPEERP 248
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 2e-06
Identities = 56/248 (22%), Positives = 92/248 (37%), Gaps = 67/248 (27%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++ + EG DF E + + ++ HPN+V+L ++++++ NG L
Sbjct: 31 VAIKMIREG--AMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLN 88
Query: 435 AL----HGFGLNRLLPGTSKVTK----------------------NETIV---------- 458
L G LL S V + E V
Sbjct: 89 YLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLAR 148
Query: 459 -------TSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG 510
TS G++ V AP S+F+ K DV+SFG+++ E+ + G++P
Sbjct: 149 YVLDDQYTSSQGTKFP----VKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYER 204
Query: 511 PENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPR 570
N + +ES V +R RP A +V + I +C PE RP
Sbjct: 205 FSN-SEVVES-VSAGYRLYRPKL------------APTEV---YTIMYSCWHEKPEDRPA 247
Query: 571 MRTVSESL 578
+ + L
Sbjct: 248 FKKLLSQL 255
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Score = 49.1 bits (117), Expect = 2e-06
Identities = 41/173 (23%), Positives = 72/173 (41%), Gaps = 45/173 (26%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL-- 432
VA++ L G + +DF SE + + HPNI+ L+ + ++I++F+ NG+L
Sbjct: 35 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEFMENGALDS 94
Query: 433 --------YAALHGFGLNRLLP----------------------------------GTSK 450
+ + G+ R + G S+
Sbjct: 95 FLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSR 154
Query: 451 VTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT 503
+++T + T S I + APEA Y KFT DV+S+GIV+ E+++
Sbjct: 155 FLEDDTSDPTYTSSLGGKIPIRWTAPEAIAY-RKFTSASDVWSYGIVMWEVMS 206
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 48.1 bits (114), Expect = 4e-06
Identities = 47/145 (32%), Positives = 73/145 (50%), Gaps = 29/145 (20%)
Query: 391 DFESEV-EAIARVQHPNIVR--LKAFYYANDEKLLISDFIRNGSLYAALHGFGLNRLLPG 447
DF +++ E +A ++ N + L+A AN +L+S+ SL + FGL R+
Sbjct: 107 DFSAQIAEGMAYIERKNYIHRDLRA---AN---VLVSE-----SLMCKIADFGLARV--- 152
Query: 448 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRL 506
+ NE G I + APEA +GS FT K DV+SFGI+L EI+T G++
Sbjct: 153 ---IEDNEYTAREGAKFPIK-----WTAPEAINFGS-FTIKSDVWSFGILLYEIVTYGKI 203
Query: 507 PDAGPENDGKGLESLVRKAFRERRP 531
P G N + S +++ +R R
Sbjct: 204 PYPGMSN--SDVMSALQRGYRMPRM 226
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 48.2 bits (115), Expect = 4e-06
Identities = 55/227 (24%), Positives = 88/227 (38%), Gaps = 56/227 (24%)
Query: 392 FESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL-------------YAALHG 438
F +E + ++HPN+V+L + ++++++ GSL A G
Sbjct: 47 FLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLG 106
Query: 439 FGL----------------------NRLLP--GTSKVTKNETIVTSGTGSRISAISNVYL 474
F L N L+ +KV+ + G + +
Sbjct: 107 FALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPVKWT 166
Query: 475 APEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLS 533
APEA + KF+ K DV+SFGI+L EI + GR+P P K + V K +R P
Sbjct: 167 APEA-LREKKFSTKSDVWSFGILLWEIYSFGRVP--YPRIPLKDVVPHVEKGYRMEAP-- 221
Query: 534 EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580
E P + + + +C ELDP RP + + E L
Sbjct: 222 EGCPPEV-------------YKVMKDCWELDPAKRPTFKQLREQLAL 255
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Score = 47.9 bits (114), Expect = 5e-06
Identities = 64/272 (23%), Positives = 98/272 (36%), Gaps = 78/272 (28%)
Query: 362 VVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKL 421
++G GSG P VAV+ L +G K+F E ++ HPNIV+L N+ +
Sbjct: 19 ILGPGSG---PIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQY 75
Query: 422 LISDFIRNGSLYAALHGFGLNRLLP-----------------GTSKVTKNETI------- 457
+I + + G L + L + R P G + + I
Sbjct: 76 IIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAAR 135
Query: 458 -----VTSGTGSRISAI----------SNVY-------------LAPEARIYGSKFTQKC 489
R+ I + Y +APE+ + G KFT +
Sbjct: 136 NCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDG-KFTTQS 194
Query: 490 DVYSFGIVLLEILT-GRLPDAGPENDGKGLESL--VRKAFRERRPLSEVIDPALVKEIHA 546
DV+SFG+++ EILT G+ P N E L V R ++P +I
Sbjct: 195 DVWSFGVLMWEILTLGQQPYPALNN----QEVLQHVTAGGRLQKP------ENCPDKI-- 242
Query: 547 KRQVLATFHIALNCTELDPEFRPRMRTVSESL 578
+ + NC DP RP + E L
Sbjct: 243 -------YQLMTNCWAQDPSERPTFDRIQEIL 267
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 47.2 bits (113), Expect = 7e-06
Identities = 37/174 (21%), Positives = 70/174 (40%), Gaps = 44/174 (25%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLY 433
VA++ + + + +E++ + + +HPNIV+ Y DE ++ +F GSL
Sbjct: 27 EVAIKVIKLESKE-KKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSLK 85
Query: 434 AALHGFGLNRLLPGT--SKVTK----------NETIV------------TSG-------- 461
L N+ L + + V K + I+ + G
Sbjct: 86 DLLKST--NQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFG 143
Query: 462 -------TGSRISAI-SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 507
T +R + + + ++APE I G + K D++S GI +E+ G+ P
Sbjct: 144 LSAQLSDTKARNTMVGTPYWMAPE-VINGKPYDYKADIWSLGITAIELAEGKPP 196
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 47.7 bits (113), Expect = 9e-06
Identities = 66/301 (21%), Positives = 110/301 (36%), Gaps = 89/301 (29%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
+G+ + G + K R G T VAV+ L E ++ +D SE + +V HP+++
Sbjct: 7 TLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVI 66
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALH----------GFGLNRLL-----PGTSKVTK 453
+L + LLI ++ + GSL + L G NR P +T
Sbjct: 67 KLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTM 126
Query: 454 NETI-----VTSGTG--------SRISAISNVYLAPEARIYGSKFTQKCDVY-------- 492
+ I ++ G R A NV +A ++ S F DVY
Sbjct: 127 GDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKR 186
Query: 493 ---------------------------SFGIVLLEILT---GRLPDAGPENDGKGLESLV 522
SFG++L EI+T P PE L +L+
Sbjct: 187 SKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPER----LFNLL 242
Query: 523 RKAFRERRP--LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580
+ +R RP SE +++ L C + +P+ RP +S+ L++
Sbjct: 243 KTGYRMERPENCSE-----------------EMYNLMLTCWKQEPDKRPTFADISKELEK 285
Query: 581 V 581
+
Sbjct: 286 M 286
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 47.3 bits (113), Expect = 9e-06
Identities = 21/43 (48%), Positives = 30/43 (69%), Gaps = 2/43 (4%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDG 515
Y+APE RI G+ ++ K D++S G+ L+E+ TGR P PEND
Sbjct: 165 YMAPE-RIQGNDYSVKSDIWSLGLSLIELATGRFP-YPPENDP 205
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 47.0 bits (111), Expect = 1e-05
Identities = 42/132 (31%), Positives = 58/132 (43%), Gaps = 30/132 (22%)
Query: 439 FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVL 498
FGL RL + NE G I + APEA +YG +FT K DV+SFGI+L
Sbjct: 146 FGLARL------IEDNEYTARQGAKFPIK-----WTAPEAALYG-RFTIKSDVWSFGILL 193
Query: 499 LEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIA 557
E+ T GR+P G N + + V + +R P P + +H +
Sbjct: 194 TELTTKGRVPYPGMVN--REVLDQVERGYRMPCP------PECPESLH---------DLM 236
Query: 558 LNCTELDPEFRP 569
C +PE RP
Sbjct: 237 CQCWRKEPEERP 248
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 47.1 bits (112), Expect = 1e-05
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 19/106 (17%)
Query: 475 APEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLS 533
APEA YG ++T + DV+S+GI+L E + G P G N + + +R P
Sbjct: 163 APEALNYG-RYTSESDVWSYGILLWETFSLGDTPYPGMSN--QQTRERIESGYRMPAPQL 219
Query: 534 EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579
P + + + L C DPE RP + L
Sbjct: 220 C---PEEI------------YRLMLQCWAYDPENRPSFSEIYNELQ 250
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 47.1 bits (113), Expect = 1e-05
Identities = 47/254 (18%), Positives = 83/254 (32%), Gaps = 105/254 (41%)
Query: 390 KDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAA-------------- 435
+D +EV+ + ++ HPNI++ + + ++ ++ G L
Sbjct: 44 EDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEE 103
Query: 436 ---------------LHG-------------------------FGLNRLLPGTSKVTKNE 455
LH FG++++L T + K
Sbjct: 104 QILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAK-- 161
Query: 456 TIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDG 515
T+V GT YL+PE + K D++S G VL E+ T + P +G
Sbjct: 162 TVV--GTPY--------YLSPE-LCQNKPYNYKSDIWSLGCVLYELCTLKHP-----FEG 205
Query: 516 KGLESLVRKAFRERRP---------LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPE 566
+ L L K + + P L ++ L K DPE
Sbjct: 206 ENLLELALKILKGQYPPIPSQYSSELRNLVSSLLQK---------------------DPE 244
Query: 567 FRPRMRTVSESLDR 580
RP ++++ L
Sbjct: 245 ERP---SIAQILQS 255
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 1e-05
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 31/116 (26%)
Query: 473 YLAPEA---RIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG---PENDGKGLESLVRKA 525
++APEA R+Y T + DV+SFG++L EI T G P G E L L+++
Sbjct: 200 WMAPEALFDRVY----THQSDVWSFGVLLWEIFTLGGSPYPGIPVEE-----LFKLLKEG 250
Query: 526 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
+R +P + + +H+ +C P RP + + E LDR+
Sbjct: 251 YRMEKPQNCTQE---------------LYHLMRDCWHEVPSQRPTFKQLVEDLDRM 291
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293 |
| >gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Score = 46.8 bits (111), Expect = 1e-05
Identities = 59/251 (23%), Positives = 99/251 (39%), Gaps = 63/251 (25%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL-- 432
VA++ L G + +DF SE + + HPNI+ L+ + +++++++ NGSL
Sbjct: 35 VAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDA 94
Query: 433 --------YAALHGFGLNRLLPGTSK-----------VTKNETIVTSGTGSRIS--AISN 471
+ + G+ R + K + +V S ++S +S
Sbjct: 95 FLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSR 154
Query: 472 V-------------------YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGP 511
V + APEA Y KFT DV+S+GIV+ E+++ G P
Sbjct: 155 VLEDDPEAAYTTRGGKIPIRWTAPEAIAY-RKFTSASDVWSYGIVMWEVMSYGERPYWEM 213
Query: 512 ENDGKGLESLVRKAFRERRPLSEVID-PALVKEIHAKRQVLATFHIALNCTELDPEFRPR 570
N V KA E L +D PA A + L+C + D RP+
Sbjct: 214 SNQD------VIKAIEEGYRLPAPMDCPA------------ALHQLMLDCWQKDRNERPK 255
Query: 571 MRTVSESLDRV 581
+ LD++
Sbjct: 256 FEQIVSILDKL 266
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 46.8 bits (111), Expect = 1e-05
Identities = 55/251 (21%), Positives = 94/251 (37%), Gaps = 68/251 (27%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLY 433
VAV+ L E T ++F E + ++HPN+V+L +I++F+ G+L
Sbjct: 33 TVAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 90
Query: 434 AALH-------------------GFGLNRL---------------LPGTSKVTK------ 453
L + L L G + + K
Sbjct: 91 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 150
Query: 454 ----NETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPD 508
T+ G++ + APE+ Y +KF+ K DV++FG++L EI T G P
Sbjct: 151 SRLMTGDTYTAHAGAKFPI---KWTAPESLAY-NKFSIKSDVWAFGVLLWEIATYGMSP- 205
Query: 509 AGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFR 568
P D + L+ K +R RP E P + + + A C + +P R
Sbjct: 206 -YPGIDLSQVYELLEKGYRMERP--EGCPPKVYELMRA-------------CWQWNPSDR 249
Query: 569 PRMRTVSESLD 579
P + ++ +
Sbjct: 250 PSFAEIHQAFE 260
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 46.4 bits (111), Expect = 1e-05
Identities = 40/153 (26%), Positives = 63/153 (41%), Gaps = 51/153 (33%)
Query: 399 IARVQHPNIVRLKAFYYANDEKL-LISDFIRNGSL-----------------YAA----- 435
++R+ HP IV+L + + +EKL L+ ++ G L YAA
Sbjct: 47 LSRINHPFIVKLH-YAFQTEEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLA 105
Query: 436 ---LHGFGL--------NRLLP----------GTSKVTKNETIVTSGTGSRISAISNVYL 474
LH G+ N LL G +K +E T+ + YL
Sbjct: 106 LEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNT-----FCGTPEYL 160
Query: 475 APEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 507
APE + G + + D +S G++L E+LTG+ P
Sbjct: 161 APEV-LLGKGYGKAVDWWSLGVLLYEMLTGKPP 192
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Score = 46.6 bits (110), Expect = 1e-05
Identities = 40/125 (32%), Positives = 61/125 (48%), Gaps = 23/125 (18%)
Query: 391 DFESEV-EAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHGFGLNRLLPGTS 449
DF +++ E +A ++ N + L ++ + + SL + FGL R+
Sbjct: 106 DFSAQIAEGMAFIEQRNYIH---------RDLRAANILVSASLVCKIADFGLARV----- 151
Query: 450 KVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPD 508
+ NE G I + APEA +GS FT K DV+SFGI+L+EI+T GR+P
Sbjct: 152 -IEDNEYTAREGAKFPIK-----WTAPEAINFGS-FTIKSDVWSFGILLMEIVTYGRIPY 204
Query: 509 AGPEN 513
G N
Sbjct: 205 PGMSN 209
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 46.0 bits (110), Expect = 2e-05
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 360 KVVVG--RGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN 417
+V G +G G G VAV+ L E + + ++F E + ++ HPNIV+L
Sbjct: 14 EVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNIVKLLGVCTEE 73
Query: 418 DEKLLISDFIRNGSL 432
+ +++ +++ G L
Sbjct: 74 EPLMIVMEYMPGGDL 88
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 41.8 bits (99), Expect = 2e-05
Identities = 24/61 (39%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 138 NLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNN 197
NL LDLS+N L L L L+LS N + PE + P + SLDL NN
Sbjct: 1 NLKSLDLSNNRLTVIPDGAFKGLPNLK-VLDLSGNNLTSISPEAFSGLPSLRSLDLSGNN 59
Query: 198 L 198
L
Sbjct: 60 L 60
|
Length = 60 |
| >gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 45.5 bits (108), Expect = 4e-05
Identities = 40/160 (25%), Positives = 67/160 (41%), Gaps = 47/160 (29%)
Query: 392 FESEVEAIARVQHPNIVRLKAFYYANDEKL----LISDFIRNGSLYAALHG--------- 438
E+E++ + R+ NI+++ F + L LI ++ G L L
Sbjct: 65 TENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKEKDLSFKTK 124
Query: 439 --------FGLNRLLPGTSK-----------VTKN----------ETIVTSGTGSRISAI 469
GL L T+K VT+N E I++S ++ +
Sbjct: 125 LDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPFKNVNFM 184
Query: 470 SNVYLAPE--ARIYGSKFTQKCDVYSFGIVLLEILTGRLP 507
VY + + I+ S++T K D+YS G+VL EI TG++P
Sbjct: 185 --VYFSYKMLNDIF-SEYTIKDDIYSLGVVLWEIFTGKIP 221
|
Length = 283 |
| >gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Score = 45.3 bits (107), Expect = 4e-05
Identities = 59/251 (23%), Positives = 99/251 (39%), Gaps = 63/251 (25%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL-- 432
VA++ L G + +DF SE + + H NI+RL+ ++I++++ NG+L
Sbjct: 36 VAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEYMENGALDK 95
Query: 433 --------YAALHGFGLNRLLPGTSKVTKN-----------ETIVTSGTGSRIS--AISN 471
+++ G+ R + K + +V S ++S +S
Sbjct: 96 YLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSR 155
Query: 472 V-------------------YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGP 511
V + APEA Y KFT DV+SFGIV+ E+++ G P
Sbjct: 156 VLEDDPEGTYTTSGGKIPIRWTAPEAIAY-RKFTSASDVWSFGIVMWEVMSFGERPYWDM 214
Query: 512 ENDGKGLESLVRKAFRERRPLSEVID-PALVKEIHAKRQVLATFHIALNCTELDPEFRPR 570
N V KA + L +D P+ A + + L C + D RPR
Sbjct: 215 SNHE------VMKAINDGFRLPAPMDCPS------------AVYQLMLQCWQQDRARRPR 256
Query: 571 MRTVSESLDRV 581
+ LD++
Sbjct: 257 FVDIVNLLDKL 267
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 45.0 bits (106), Expect = 5e-05
Identities = 33/84 (39%), Positives = 44/84 (52%), Gaps = 13/84 (15%)
Query: 431 SLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCD 490
+L + FGL RL + NE G I + APEA +YG +FT K D
Sbjct: 138 NLVCKIADFGLARL------IEDNEYTARQGAKFPIK-----WTAPEAALYG-RFTIKSD 185
Query: 491 VYSFGIVLLEILT-GRLPDAGPEN 513
V+SFGI+L E++T GR+P G N
Sbjct: 186 VWSFGILLTELVTKGRVPYPGMVN 209
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Score = 44.9 bits (106), Expect = 6e-05
Identities = 44/187 (23%), Positives = 73/187 (39%), Gaps = 60/187 (32%)
Query: 372 PTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGS 431
P +VAV+ L E DF E++ ++R++ PNI+RL A +D +I++++ NG
Sbjct: 46 PVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGD 105
Query: 432 LYAALHGFGLNRLLPGTSKVTKNETIVTSGT----GSRISA------------------- 468
L+ F L+R P + + ++ T ++I++
Sbjct: 106 ----LNQF-LSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRN 160
Query: 469 ----------------ISNVYLAPEARIYG----------------SKFTQKCDVYSFGI 496
N+Y RI G KFT DV++FG+
Sbjct: 161 CLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGV 220
Query: 497 VLLEILT 503
L EILT
Sbjct: 221 TLWEILT 227
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 44.7 bits (106), Expect = 7e-05
Identities = 24/98 (24%), Positives = 41/98 (41%), Gaps = 2/98 (2%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
+G+ G ++ +VAV+ L E + KDFE E E + QH NIV
Sbjct: 12 ELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIV 71
Query: 409 RLKAFYYANDEKLLISDFIRNGSL--YAALHGFGLNRL 444
+ D +++ +++ +G L + HG L
Sbjct: 72 KFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFL 109
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Score = 44.1 bits (104), Expect = 9e-05
Identities = 56/250 (22%), Positives = 96/250 (38%), Gaps = 65/250 (26%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL-- 432
VA+ L G + + + F +E + + H NIVRL+ + +++++++ NG+L
Sbjct: 36 VAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYMSNGALDS 95
Query: 433 -----YAALHGFGLNRLLPGTSKVTK--------------NETIVTSGTGSRISA----- 468
L L +LPG + K ++ +V S +IS
Sbjct: 96 FLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQ 155
Query: 469 ---ISNVYL-----------APEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP--DAGP 511
+Y APEA Y F+ DV+SFGIV+ E+++ G P D
Sbjct: 156 EDKSEAIYTTMSGKSPVLWAAPEAIQYH-HFSSASDVWSFGIVMWEVMSYGERPYWDMSG 214
Query: 512 ENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFH-IALNCTELDPEFRPR 570
++ K +E FR + A R H + L+C + + RPR
Sbjct: 215 QDVIKAVED----GFR----------------LPAPRNCPNLLHQLMLDCWQKERGERPR 254
Query: 571 MRTVSESLDR 580
+ L +
Sbjct: 255 FSQIHSILSK 264
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 44.7 bits (104), Expect = 9e-05
Identities = 45/233 (19%), Positives = 75/233 (32%), Gaps = 56/233 (24%)
Query: 390 KDFESEVEAIARVQHP-NIVRLKAFYYANDEKLLISDFIRNGSLY--------------- 433
+ F E++ +A + HP NIV+L F+ L+ +++ GSL
Sbjct: 42 ERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSES 101
Query: 434 -------------AALHGFGL--------NRLLP-----------GTSKVTKNETIVTSG 461
LH G+ N LL G +K+ + +S
Sbjct: 102 EALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSI 161
Query: 462 TGSRISAI-SNVYLAPE--ARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGL 518
+++ + Y+APE + + + D++S GI L E+LTG P
Sbjct: 162 PALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPP--FEGEKNSSA 219
Query: 519 ESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRM 571
S K E + L A + DP+ R
Sbjct: 220 TSQTLKIILELPT--PSLASPLSPSNPELISKAA-SDLLKKLLAKDPKNRLSS 269
|
Length = 384 |
| >gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 1e-04
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 507
Y+APE RI G ++ DV+S G+ LLE+ R P
Sbjct: 169 YMAPE-RIQGKPYSITSDVWSLGLTLLEVAQNRFP 202
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287 |
| >gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 1e-04
Identities = 43/209 (20%), Positives = 80/209 (38%), Gaps = 55/209 (26%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPT--VVAVRRL---TEGDATWRFKDFESEVEAIARVQ 403
++G+ G +Y+ G PT VVA++ + T D D + EV +++++
Sbjct: 8 LIGRGAYGAVYR-------GKHVPTGRVVALKIINLDTPDDDV---SDIQREVALLSQLR 57
Query: 404 H---PNIVRLKAFYYANDEKLLISDFIRNGSL------------YAA------------L 436
PNI + Y +I ++ GS+ Y + +
Sbjct: 58 QSQPPNITKYYGSYLKGPRLWIIMEYAEGGSVRTLMKAGPIAEKYISVIIREVLVALKYI 117
Query: 437 HGFGL--------NRLLPGTSKVTKNE----TIVTSGTGSRISAISNVY-LAPEARIYGS 483
H G+ N L+ T V + ++ + R + + Y +APE G
Sbjct: 118 HKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGK 177
Query: 484 KFTQKCDVYSFGIVLLEILTGRLPDAGPE 512
+ K D++S GI + E+ TG P + +
Sbjct: 178 YYDTKADIWSLGITIYEMATGNPPYSDVD 206
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 43.3 bits (103), Expect = 2e-04
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 370 GAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRN 429
G T VAV+ L E + KDF E + ++ HPN+VRL + L+ +++
Sbjct: 21 GKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80
Query: 430 GSL 432
G L
Sbjct: 81 GDL 83
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 43.4 bits (102), Expect = 2e-04
Identities = 20/63 (31%), Positives = 37/63 (58%)
Query: 370 GAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRN 429
G P +VAV+ L DF E++ ++R+++PNI+RL ++D +I++++ N
Sbjct: 42 GQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMEN 101
Query: 430 GSL 432
G L
Sbjct: 102 GDL 104
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 43.0 bits (101), Expect = 2e-04
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 19/109 (17%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
+ APEA + KF+ K DV+S+G++L E+ + GR P P+ K ++ V K +R P
Sbjct: 163 WTAPEALKHK-KFSSKSDVWSYGVLLWEVFSYGRAP--YPKMSLKEVKECVEKGYRMEPP 219
Query: 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580
+ A VL T +C E +P+ RP + E L++
Sbjct: 220 ----------EGCPADVYVLMT-----SCWETEPKKRPSFHKLREKLEK 253
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|238064 cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 2e-04
Identities = 38/164 (23%), Positives = 57/164 (34%), Gaps = 28/164 (17%)
Query: 66 RVTSLYLPNRNLTGY----MPSELGLLNSLTRLSLASNNFSKPIPANLFNA----TNLVY 117
+ L L L G + L L L+LA+N L NL
Sbjct: 138 ALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEV 197
Query: 118 LDLAHNSF----CGPIPDRIKTLKNLTHLDLSSNLL-NGSLPEFLLDLRALTG---TLNL 169
LDL +N + + + +LK+L L+L N L + L + TL+L
Sbjct: 198 LDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSL 257
Query: 170 SFN--------QFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQV 205
S N + + E ++ LDLR N E Q+
Sbjct: 258 SCNDITDDGAKDLAEVLAEK----ESLLELDLRGNKFGEEGAQL 297
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). Length = 319 |
| >gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 2e-04
Identities = 19/49 (38%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESL 521
Y++PE R+ G+ +T + D++S G+ L+E+ GR P P D K LE++
Sbjct: 164 YMSPE-RLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPP--DAKELEAM 209
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 38.7 bits (91), Expect = 3e-04
Identities = 27/62 (43%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 114 NLVYLDLAHNSFCGPIPDRI-KTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFN 172
NL LDL++N IPD K L NL LDLS N L PE L +L +L+LS N
Sbjct: 1 NLKSLDLSNNRLTV-IPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLR-SLDLSGN 58
Query: 173 QF 174
Sbjct: 59 NL 60
|
Length = 60 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 38.7 bits (91), Expect = 3e-04
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 90 SLTRLSLASNNFSKPIPANLFNA-TNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNL 148
+L L L++N + IP F NL LDL+ N+ P+ L +L LDLS N
Sbjct: 1 NLKSLDLSNNRLTV-IPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNN 59
Query: 149 L 149
L
Sbjct: 60 L 60
|
Length = 60 |
| >gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Score = 42.7 bits (100), Expect = 3e-04
Identities = 46/191 (24%), Positives = 78/191 (40%), Gaps = 59/191 (30%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLY 433
+VAV+ L + R KDF+ E E + +QH +IV+ D +++ +++++G L
Sbjct: 37 LVAVKALKDPTLAAR-KDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLN 95
Query: 434 AAL--HG-----------------FGLNRLLPGTSKVTKNETIVTS-------------- 460
L HG GL+++L S++ + S
Sbjct: 96 KFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCL 155
Query: 461 -GTG----------SRISAISNVY------------LAPEARIYGSKFTQKCDVYSFGIV 497
G SR ++ Y + PE+ +Y KFT + DV+SFG++
Sbjct: 156 VGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY-RKFTTESDVWSFGVI 214
Query: 498 LLEILT-GRLP 507
L EI T G+ P
Sbjct: 215 LWEIFTYGKQP 225
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 3e-04
Identities = 37/174 (21%), Positives = 65/174 (37%), Gaps = 54/174 (31%)
Query: 389 FKDFESEVEAIARVQHPNIVRLKAFYYA---NDEKLLI-SDFIRNGSLYAALHGFGL--- 441
K+ E++ + ++HPN+V+ YY + EK+ I ++ G+L L +
Sbjct: 43 IKEIADEMKVLELLKHPNLVK----YYGVEVHREKVYIFMEYCSGGTLEELLEHGRILDE 98
Query: 442 -------NRLLPG-----TSKVT----KNETI----------VTSGTGSRISAISNV--- 472
+LL G + + K I G ++ +
Sbjct: 99 HVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGE 158
Query: 473 ----------YLAPEARIYGSKFTQK---CDVYSFGIVLLEILTGRLPDAGPEN 513
Y+APE I G K D++S G V+LE+ TG+ P + +N
Sbjct: 159 EVQSLAGTPAYMAPEV-ITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDN 211
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 42.9 bits (101), Expect = 3e-04
Identities = 79/284 (27%), Positives = 112/284 (39%), Gaps = 86/284 (30%)
Query: 362 VVGRGSGMGAPTVVAVRRLTEGD------------ATWRFKD---FESEVEAIARVQHPN 406
V+G+GS G V VR++T D AT + +D + E + +A V HP
Sbjct: 3 VLGQGS-FG--KVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPF 59
Query: 407 IVRLKAFYYANDEKLLISDFIRNGSL-----------------YAA--------LHGFGL 441
IV+L + + LI DF+R G L Y A LH G+
Sbjct: 60 IVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGI 119
Query: 442 --------NRLL--PGTSKVT----KNETIVTSGTGSRISAISNV-YLAPEARIYGSKFT 486
N LL G K+T E+I S V Y+APE + T
Sbjct: 120 IYRDLKPENILLDEEGHIKLTDFGLSKESI--DHEKKAYSFCGTVEYMAPEV-VNRRGHT 176
Query: 487 QKCDVYSFGIVLLEILTGRLPDAG-----------------PENDGKGLESLVRKAFRER 529
Q D +SFG+++ E+LTG LP G P+ +SL+R F+ R
Sbjct: 177 QSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRALFK-R 235
Query: 530 RPLSEV-IDPALVKEIHAKRQVLATFHIALNC---TELDPEFRP 569
P + + P V+EI KR + I N E+ P F+P
Sbjct: 236 NPANRLGAGPDGVEEI--KRHPFFS-TIDWNKLYRREIKPPFKP 276
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 42.3 bits (99), Expect = 4e-04
Identities = 63/286 (22%), Positives = 112/286 (39%), Gaps = 69/286 (24%)
Query: 335 FSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFES 394
++L +++L +GK + G V++G G VAV+ + + DAT + F +
Sbjct: 1 WALNMKEL--KLLQTIGKGEFG---DVMLGDYRG----NKVAVKCI-KNDAT--AQAFLA 48
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLI-SDFIRNGSLYAALHGFG------------- 440
E + +++H N+V+L L I ++++ GSL L G
Sbjct: 49 EASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFS 108
Query: 441 ---------------LNRLLPGTSKVTKNETIVTS---GTGSRISAISNV------YLAP 476
++R L + + + + G S+ + + AP
Sbjct: 109 LDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAP 168
Query: 477 EARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEV 535
EA + KF+ K DV+SFGI+L EI + GR+P P K + V K ++ P +
Sbjct: 169 EA-LREKKFSTKSDVWSFGILLWEIYSFGRVP--YPRIPLKDVVPRVEKGYKMDAP--DG 223
Query: 536 IDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
P + + + C LD RP + E L+ +
Sbjct: 224 CPPVV-------------YDVMKQCWHLDAATRPSFLQLREQLEHI 256
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 41.8 bits (98), Expect = 5e-04
Identities = 53/255 (20%), Positives = 93/255 (36%), Gaps = 47/255 (18%)
Query: 370 GAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK--LLISDFI 427
G +VAV+ L ++ E+ + + H NIV+ K K LI +++
Sbjct: 31 GTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYV 90
Query: 428 RNGSL--YAALHGFGLNRLLPGTSKVTK-----------------------NETIVTSGT 462
GSL Y H L +LL ++ + N+ +V G
Sbjct: 91 PLGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGD 150
Query: 463 GSRISAISN---------------VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 507
A+ + A E + +KF+ DV+SFG+ L E+LT
Sbjct: 151 FGLAKAVPEGHEYYRVREDGDSPVFWYAVEC-LKENKFSYASDVWSFGVTLYELLTHCDS 209
Query: 508 DAGPENDGKGLESL-VRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPE 566
P K E + ++ L E+++ + + K + + NC E + +
Sbjct: 210 KQSPPK--KFEEMIGPKQGQMTVVRLIELLERGM-RLPCPKNCPQEVYILMKNCWETEAK 266
Query: 567 FRPRMRTVSESLDRV 581
FRP R++ L +
Sbjct: 267 FRPTFRSLIPILKEM 281
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 5e-04
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 19/107 (17%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
++ PEA +YG KF+ D++SFG+VL EI + G P G N + + +VRK R+ P
Sbjct: 192 WMPPEAIMYG-KFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN--QEVIEMVRK--RQLLP 246
Query: 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 578
SE P + + + C + P RPR + + L
Sbjct: 247 CSEDCPPRM-------------YSLMTECWQEGPSRRPRFKDIHTRL 280
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 41.3 bits (97), Expect = 9e-04
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 4/46 (8%)
Query: 463 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP 507
G + I ++ PE+ +Y KFT + DV+SFG+VL EI T G+ P
Sbjct: 182 GHTMLPIR--WMPPESIMYR-KFTTESDVWSFGVVLWEIFTYGKQP 224
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Score = 41.1 bits (96), Expect = 9e-04
Identities = 45/192 (23%), Positives = 76/192 (39%), Gaps = 60/192 (31%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRN--- 429
+VAV+ L E + R +DF+ E E + +QH +IVR L++ +++R+
Sbjct: 36 MLVAVKALKEASESAR-QDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMVFEYMRHGDL 94
Query: 430 ---------------GSLYAALHGFGLNRLLPGTSKV------------------TKN-- 454
G A L ++L S++ T+N
Sbjct: 95 NRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCL 154
Query: 455 ---ETIVTSG---------------TGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 496
+V G G R + + ++ PE+ +Y KFT + D++SFG+
Sbjct: 155 VGQGLVVKIGDFGMSRDIYSTDYYRVGGR-TMLPIRWMPPESILY-RKFTTESDIWSFGV 212
Query: 497 VLLEILT-GRLP 507
VL EI T G+ P
Sbjct: 213 VLWEIFTYGKQP 224
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 41.0 bits (97), Expect = 0.001
Identities = 45/227 (19%), Positives = 81/227 (35%), Gaps = 71/227 (31%)
Query: 340 EDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAI 399
DL R V+G+ +G++YKV + +G + A++++ K E++ +
Sbjct: 1 SDLERVK--VLGQGSSGVVYKVR-HKPTG----KIYALKKIHVDGDEEFRKQLLRELKTL 53
Query: 400 ARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL-------------------YAALHG-- 438
+ P +V+ +Y E ++ +++ GSL L G
Sbjct: 54 RSCESPYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLD 113
Query: 439 ------------------------------FGLNRLLPGTSKVTKNETIVTSGTGSRISA 468
FG++++L T T V GT
Sbjct: 114 YLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQC--NTFV--GTV----- 164
Query: 469 ISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDG 515
Y++PE RI G ++ D++S G+ LLE G+ P P
Sbjct: 165 ---TYMSPE-RIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPS 207
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 40.7 bits (95), Expect = 0.002
Identities = 37/126 (29%), Positives = 53/126 (42%), Gaps = 23/126 (18%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG 127
+L L + N +P E+ LL++L L L SNN + ++L N NL L+L++N
Sbjct: 189 NNLDL-SGNKISDLPPEIELLSALEELDL-SNNSIIELLSSLSNLKNLSGLELSNNKLED 246
Query: 128 PI---------------------PDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGT 166
+ +L NL LDLS N L+ +LP L L L
Sbjct: 247 LPESIGNLSNLETLDLSNNQISSISSLGSLTNLRELDLSGNSLSNALPLIALLLLLLELL 306
Query: 167 LNLSFN 172
LNL
Sbjct: 307 LNLLLT 312
|
Length = 394 |
| >gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 0.002
Identities = 37/177 (20%), Positives = 71/177 (40%), Gaps = 50/177 (28%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++ + EG + +F E + + ++ H +V+L ++++++ NG L
Sbjct: 31 VAIKMIKEGSMSE--DEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLN 88
Query: 435 AL----HGFGLNRLLP--------------------------------GTSKVTKN---- 454
L F ++LL G KV+
Sbjct: 89 YLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSR 148
Query: 455 ---ETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP 507
+ TS GS+ + PE +Y SKF+ K DV++FG+++ E+ + G++P
Sbjct: 149 YVLDDEYTSSVGSKFPV---RWSPPEVLLY-SKFSSKSDVWAFGVLMWEVYSLGKMP 201
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256 |
| >gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 39.9 bits (94), Expect = 0.002
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEND 514
Y+APE I + D +S GI+L E+LTGR P + D
Sbjct: 158 YVAPEI-ILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDED 198
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 0.002
Identities = 34/108 (31%), Positives = 49/108 (45%), Gaps = 21/108 (19%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
++ PEA +YG KFT + D++SFG+VL EI + G P G N V + R R+
Sbjct: 192 WMPPEAILYG-KFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQE------VIEMIRSRQL 244
Query: 532 LSEVID-PALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 578
L D PA V + + + C P RPR + + L
Sbjct: 245 LPCPEDCPARV------------YALMIECWNEIPARRPRFKDIHTRL 280
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 0.002
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPEND 514
++APE+ G FT K DV+SFG+VL E+ T P G N+
Sbjct: 187 WMAPESLKDG-VFTTKSDVWSFGVVLWEMATLAEQPYQGLSNE 228
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277 |
| >gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Score = 39.9 bits (93), Expect = 0.002
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 470 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 507
+N Y+APE RI G ++ DV+S GI +E+ GR P
Sbjct: 156 TNAYMAPE-RISGEQYGIHSDVWSLGISFMELALGRFP 192
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279 |
| >gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Score = 39.9 bits (93), Expect = 0.002
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 370 GAPTVVAVRRLTEGDATWRFK-DFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIR 428
G P +VAV+ L DA + DF EV+ ++R++ PNI+RL D +I++++
Sbjct: 44 GRPLLVAVKIL-RPDANKNARNDFLKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYME 102
Query: 429 NGSL 432
NG L
Sbjct: 103 NGDL 106
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304 |
| >gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Score = 39.3 bits (91), Expect = 0.003
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 447 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRL 506
G SK + +TI SGTG R + +++PE I G + +K DV+S G ++E+LT +
Sbjct: 151 GASK--RLQTICMSGTGIRSVTGTPYWMSPEV-ISGEGYGRKADVWSLGCTVVEMLTEKP 207
Query: 507 P 507
P
Sbjct: 208 P 208
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266 |
| >gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Score = 39.2 bits (91), Expect = 0.004
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 25/121 (20%)
Query: 465 RISAISNVYLAPEA---RIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLES 520
RI+ + ++A E+ R+Y T K DV+SFG+ + EI T G+ P G EN +
Sbjct: 172 RIAKMPVKWIAIESLADRVY----TTKSDVWSFGVTMWEIATRGQTPYPGVEN--SEIYD 225
Query: 521 LVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580
+R+ R ++P + +D + + +C L+P+ RP T+ L++
Sbjct: 226 YLRQGNRLKQP-PDCLD--------------GLYSLMSSCWLLNPKDRPSFETLRCELEK 270
Query: 581 V 581
Sbjct: 271 A 271
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272 |
| >gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Score = 39.5 bits (92), Expect = 0.004
Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEND-----------------G 515
Y+APE + G K+T D +SFG++L E+L G+ P G + D
Sbjct: 162 YIAPEI-LQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPRWIT 220
Query: 516 KGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVS 575
K + ++ K F ER P + +V I AL ELDP F+P++++ S
Sbjct: 221 KESKDILEKLF-ERDPTRRL---GVVGNIRGHPFFKTINWTALEKRELDPPFKPKVKSPS 276
Query: 576 E 576
+
Sbjct: 277 D 277
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316 |
| >gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 39.4 bits (92), Expect = 0.004
Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 18/98 (18%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
++APE+ I+ +T + DV+S+GI+L EI + G P G D K L+++ +R +P
Sbjct: 209 WMAPES-IFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSK-FYKLIKEGYRMAQP 266
Query: 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRP 569
HA ++ + I C + DP RP
Sbjct: 267 ------------EHAPAEI---YDIMKTCWDADPLKRP 289
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302 |
| >gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 39.4 bits (92), Expect = 0.004
Identities = 44/219 (20%), Positives = 81/219 (36%), Gaps = 57/219 (26%)
Query: 394 SEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHGFG----------LNR 443
SE+E + + H NIV+ F + + +++ GS+ + L +G +
Sbjct: 57 SEIETLKDLDHLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQ 116
Query: 444 LLPGTSKV---------TKNETIVTSGTGS-RIS--AIS----NVY-------------- 473
+L G + + K + ++ G +IS IS ++Y
Sbjct: 117 VLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFW 176
Query: 474 LAPEA-RIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR-- 530
+APE Y ++ K D++S G V+LE+ GR P + E + K +R
Sbjct: 177 MAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAA-----MFKLGNKRSAP 231
Query: 531 PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRP 569
P+ + L C ++P+ RP
Sbjct: 232 PIPPDVSMNLSPV---------ALDFLNACFTINPDNRP 261
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272 |
| >gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Score = 39.1 bits (91), Expect = 0.004
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
A+ N+Y APE S+ T+ CD +S G +L E+LTG+
Sbjct: 143 AVENMYCAPEVGGI-SEETEACDWWSLGAILFELLTGK 179
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 39.0 bits (91), Expect = 0.004
Identities = 54/199 (27%), Positives = 76/199 (38%), Gaps = 56/199 (28%)
Query: 378 RRLTEGDATWRFKDFESEVEAIA-----RVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
R L E D WRF F + +A ++ H +I L F A D + I D
Sbjct: 96 RPLPE-DQVWRF--FIQILLGLAHLHSKKILHRDIKSLNLFLDAYDN-VKIGDL------ 145
Query: 433 YAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVY 492
G+ +LL + TIV GT YL+PE + +K DV+
Sbjct: 146 -------GVAKLLSDNTNFAN--TIV--GT--------PYYLSPEL-CEDKPYNEKSDVW 185
Query: 493 SFGIVLLEILTGRLP-DAGPENDGKGLESLVRKAFRER-RPLSEVIDPALVKEIHAKRQV 550
+ G+VL E TG+ P DA N G +L+ K R P+S++ L + I
Sbjct: 186 ALGVVLYECCTGKHPFDA--NNQG----ALILKIIRGVFPPVSQMYSQQLAQLIDQ---- 235
Query: 551 LATFHIALNCTELDPEFRP 569
C D RP
Sbjct: 236 ---------CLTKDYRQRP 245
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Score = 38.8 bits (90), Expect = 0.004
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
++G+ +G KV + G V+A ++ + + +D+ E++ +A HPNIV
Sbjct: 9 IIGELGDGAFGKVYKAQNKETG---VLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIV 65
Query: 409 R-LKAFYYANDEKLLISDFIRNGSLYAAL 436
+ L AFYY N+ +LI +F G++ A +
Sbjct: 66 KLLDAFYYENNLWILI-EFCAGGAVDAVM 93
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282 |
| >gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Score = 38.8 bits (90), Expect = 0.004
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 21/111 (18%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVRKAFRERR 530
++A E+ I +FT + DV+S+G+ + E++T G P D P + + L+ K R +
Sbjct: 177 WMALES-ILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPARE---IPDLLEKGERLPQ 232
Query: 531 PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
P P ++ + I + C +D E RPR R + + R+
Sbjct: 233 P------PICTIDV---------YMIMVKCWMIDSECRPRFRELVDEFSRM 268
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 584 | |||
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 99.98 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 99.98 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 99.97 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 99.97 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 99.97 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 99.97 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 99.97 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 99.97 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 99.97 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 99.97 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 99.97 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 99.97 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 99.97 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 99.96 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 99.96 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 99.96 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 99.96 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 99.96 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 99.96 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 99.96 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 99.96 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 99.96 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 99.96 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 99.96 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 99.96 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 99.96 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 99.96 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 99.96 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 99.96 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 99.96 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 99.96 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 99.96 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 99.96 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 99.96 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 99.96 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 99.96 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 99.96 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 99.96 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 99.96 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 99.96 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 99.96 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 99.95 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 99.95 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 99.95 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 99.95 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 99.95 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 99.95 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 99.95 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 99.95 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 99.95 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 99.95 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 99.95 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 99.95 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 99.95 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 99.95 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 99.95 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 99.95 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 99.95 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 99.95 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 99.95 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 99.95 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 99.95 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 99.95 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 99.95 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 99.95 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 99.95 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 99.95 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 99.95 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 99.95 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 99.95 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 99.95 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 99.95 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 99.95 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 99.95 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 99.95 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 99.95 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 99.95 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 99.95 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 99.95 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 99.95 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 99.95 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 99.95 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 99.95 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 99.95 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 99.95 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 99.95 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 99.95 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 99.95 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 99.95 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 99.95 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 99.95 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 99.95 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 99.95 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 99.95 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 99.95 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 99.95 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 99.95 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 99.95 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 99.95 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 99.95 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 99.95 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 99.95 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 99.95 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 99.95 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 99.95 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 99.95 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 99.95 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 99.94 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 99.94 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 99.94 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 99.94 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 99.94 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 99.94 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 99.94 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 99.94 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 99.94 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 99.94 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 99.94 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 99.94 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 99.94 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 99.94 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 99.94 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 99.94 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 99.94 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 99.94 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 99.94 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 99.94 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 99.94 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 99.94 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 99.94 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 99.94 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.94 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 99.94 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 99.94 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 99.94 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 99.94 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 99.94 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 99.94 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 99.94 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 99.94 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 99.94 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 99.94 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 99.94 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 99.94 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 99.94 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 99.94 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 99.94 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 99.94 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 99.94 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 99.94 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 99.94 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 99.94 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 99.94 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 99.94 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 99.94 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 99.94 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 99.94 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 99.94 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 99.94 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 99.94 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 99.94 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 99.94 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 99.94 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 99.94 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 99.94 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 99.94 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 99.94 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 99.94 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 99.94 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 99.94 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 99.94 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 99.94 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 99.94 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 99.94 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 99.94 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 99.94 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 99.94 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 99.94 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 99.94 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 99.94 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 99.94 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 99.93 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 99.93 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 99.93 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 99.93 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 99.93 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 99.93 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 99.93 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 99.93 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 99.93 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 99.93 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 99.93 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 99.93 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 99.93 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 99.93 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 99.93 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 99.93 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 99.93 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 99.93 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 99.93 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 99.93 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 99.93 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 99.93 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 99.93 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 99.93 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 99.93 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 99.93 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 99.93 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 99.93 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 99.93 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 99.93 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 99.93 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 99.93 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 99.93 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 99.93 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 99.93 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 99.93 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 99.93 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 99.93 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 99.93 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 99.93 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 99.93 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 99.93 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 99.93 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 99.93 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 99.93 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 99.92 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 99.92 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 99.92 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 99.92 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 99.92 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 99.92 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 99.92 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 99.92 | |
| PTZ00284 | 467 | protein kinase; Provisional | 99.92 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 99.92 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 99.92 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 99.92 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 99.92 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 99.92 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 99.92 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 99.92 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 99.92 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 99.92 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 99.92 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 99.92 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 99.92 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 99.92 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 99.92 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 99.92 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 99.92 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 99.92 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 99.92 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 99.92 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 99.92 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 99.92 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 99.92 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 99.92 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 99.92 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 99.92 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 99.92 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 99.92 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 99.92 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 99.92 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 99.92 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 99.92 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 99.92 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 99.92 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 99.92 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 99.91 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 99.91 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 99.91 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 99.91 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 99.91 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 99.91 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 99.91 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 99.91 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 99.91 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.91 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 99.91 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 99.91 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 99.91 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 99.91 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 99.91 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 99.91 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 99.91 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 99.91 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 99.91 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 99.91 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 99.91 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 99.91 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.91 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 99.9 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 99.9 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 99.9 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 99.9 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 99.9 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 99.9 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 99.9 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 99.9 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 99.9 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 99.9 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 99.9 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 99.9 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 99.9 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 99.89 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 99.89 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.89 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 99.89 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.89 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.88 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 99.88 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.88 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 99.88 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.88 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.87 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.87 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.87 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.86 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 99.86 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 99.86 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.85 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.85 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.85 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.83 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.82 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 99.82 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.82 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.82 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.81 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.81 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.79 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.78 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.78 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.74 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.74 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.73 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.71 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.71 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.7 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.7 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.68 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.68 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.66 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.63 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.58 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 99.55 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 99.53 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 99.52 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 99.48 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.48 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 99.47 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.45 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 99.44 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.43 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.42 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 99.38 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.37 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.31 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.3 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.25 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 99.22 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 99.21 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 99.19 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 99.15 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 99.14 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 99.13 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 99.11 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 99.1 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 99.1 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.09 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 99.07 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 99.05 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 99.04 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.04 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.01 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 99.01 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 98.99 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 98.97 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 98.97 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 98.96 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 98.95 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 98.92 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 98.9 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.89 | |
| PF08263 | 43 | LRRNT_2: Leucine rich repeat N-terminal domain; In | 98.86 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 98.86 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.81 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 98.81 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 98.81 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 98.8 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 98.76 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 98.74 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 98.73 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 98.63 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 98.62 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 98.6 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 98.57 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 98.57 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 98.54 | |
| KOG4579 | 177 | consensus Leucine-rich repeat (LRR) protein associ | 98.45 | |
| KOG3207 | 505 | consensus Beta-tubulin folding cofactor E [Posttra | 98.45 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 98.43 | |
| smart00090 | 237 | RIO RIO-like kinase. | 98.38 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 98.38 | |
| KOG3207 | 505 | consensus Beta-tubulin folding cofactor E [Posttra | 98.35 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 98.32 | |
| KOG4579 | 177 | consensus Leucine-rich repeat (LRR) protein associ | 98.26 | |
| PF12799 | 44 | LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_ | 98.25 | |
| KOG0531 | 414 | consensus Protein phosphatase 1, regulatory subuni | 98.2 | |
| KOG4658 | 889 | consensus Apoptotic ATPase [Signal transduction me | 98.18 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 98.14 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 98.12 | |
| KOG4658 | 889 | consensus Apoptotic ATPase [Signal transduction me | 98.08 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 98.07 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 98.05 | |
| KOG0531 | 414 | consensus Protein phosphatase 1, regulatory subuni | 98.03 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 98.01 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 98.01 | |
| PF12799 | 44 | LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_ | 97.99 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 97.73 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 97.71 | |
| PRK15386 | 426 | type III secretion protein GogB; Provisional | 97.58 | |
| KOG1644 | 233 | consensus U2-associated snRNP A' protein [RNA proc | 97.46 | |
| KOG1909 | 382 | consensus Ran GTPase-activating protein [RNA proce | 97.44 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 97.31 | |
| KOG2982 | 418 | consensus Uncharacterized conserved protein [Funct | 97.29 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 97.28 | |
| KOG2739 | 260 | consensus Leucine-rich acidic nuclear protein [Cel | 97.27 | |
| KOG1909 | 382 | consensus Ran GTPase-activating protein [RNA proce | 97.27 | |
| KOG1644 | 233 | consensus U2-associated snRNP A' protein [RNA proc | 97.22 | |
| PRK15386 | 426 | type III secretion protein GogB; Provisional | 97.05 | |
| KOG3665 | 699 | consensus ZYG-1-like serine/threonine protein kina | 97.0 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 96.99 | |
| COG0661 | 517 | AarF Predicted unusual protein kinase [General fun | 96.95 | |
| KOG2739 | 260 | consensus Leucine-rich acidic nuclear protein [Cel | 96.94 |
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-55 Score=510.12 Aligned_cols=459 Identities=27% Similarity=0.465 Sum_probs=303.2
Q ss_pred CEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecc
Q 007935 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLS 145 (584)
Q Consensus 66 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls 145 (584)
.++.|+|++|++.+.+|..+ ..++|+.|+|++|++++.+|..+.++++|+.|+|++|++++.+|..+.++++|+.|+|+
T Consensus 453 ~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 531 (968)
T PLN00113 453 SLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLS 531 (968)
T ss_pred CCcEEECcCceeeeecCccc-ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECC
Confidence 45555555555555555544 23567777777777777777777778888888888888888888888888888888888
Q ss_pred cCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCCCCCCC
Q 007935 146 SNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGLCGF 225 (584)
Q Consensus 146 ~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~l~~~ 225 (584)
+|.++|.+|..+.++++|+ .|+|++|+++|.+|..+.++++|+.|++++|+++|.+|..+.+..+....+.||+.+|+.
T Consensus 532 ~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~ 610 (968)
T PLN00113 532 HNQLSGQIPASFSEMPVLS-QLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGG 610 (968)
T ss_pred CCcccccCChhHhCcccCC-EEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCC
Confidence 8888888888888888888 888888888888888888888888888888888888887777777777778888888874
Q ss_pred CCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCCccEEEeehhHHHHHHHHhhhheeeeehhhhhcc
Q 007935 226 PLQS---PCPEPENPKVHANPEVEDGPQNPKNTNFGYSGDVKDRGRNGSVVVSVISGVSVVVGVVSVSVWLFRRKRRARE 302 (584)
Q Consensus 226 ~~~~---~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~vv~~~~~vl~vv~~~~~~~~r~~~~~~ 302 (584)
+... +|.. ..+.....++++++.+++++++++++++++++|+++.+.
T Consensus 611 ~~~~~~~~c~~------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (968)
T PLN00113 611 DTTSGLPPCKR------------------------------VRKTPSWWFYITCTLGAFLVLALVAFGFVFIRGRNNLEL 660 (968)
T ss_pred ccccCCCCCcc------------------------------ccccceeeeehhHHHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 3210 1100 001111112222222222222222222222222221111
Q ss_pred ccCCcccccccccccccccccCCCceeeecC--CcccchhhHhhhc--ceeceeecCceEEEEEecCCCCCCCceEEEEE
Q 007935 303 GKMGKEEKTNDAVLVTDEEEGQKGKFFIIDE--GFSLELEDLLRAS--AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVR 378 (584)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~--~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK 378 (584)
.+. +. .. .......++. ...++++++.... .++||+|+||.||+|+....+ ..||||
T Consensus 661 ~~~---~~-~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~-----~~vavK 721 (968)
T PLN00113 661 KRV---EN-ED----------GTWELQFFDSKVSKSITINDILSSLKEENVISRGKKGASYKGKSIKNG-----MQFVVK 721 (968)
T ss_pred ccc---cc-cc----------ccccccccccccchhhhHHHHHhhCCcccEEccCCCeeEEEEEECCCC-----cEEEEE
Confidence 100 00 00 0001111111 1234555554443 468999999999999986554 899999
Q ss_pred EecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeecccCCcHHHHHhcc-------------------
Q 007935 379 RLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHGF------------------- 439 (584)
Q Consensus 379 ~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~GsL~~~L~~~------------------- 439 (584)
+++.... ...+|++++++++|||||+++|+|.+++..++|||||++|+|.++++..
T Consensus 722 ~~~~~~~-----~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~l~~~~~~~i~~~ia~~L~yL 796 (968)
T PLN00113 722 EINDVNS-----IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRNLSWERRRKIAIGIAKALRFL 796 (968)
T ss_pred EccCCcc-----ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhcCCHHHHHHHHHHHHHHHHHh
Confidence 9875422 1235789999999999999999999999999999999999998777531
Q ss_pred --------cccccCCCCccccccCeEE-ecCC-----CcccccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCC
Q 007935 440 --------GLNRLLPGTSKVTKNETIV-TSGT-----GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505 (584)
Q Consensus 440 --------g~~~~~~~~~~i~~~~~~~-~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~ 505 (584)
-|+++++.|+.+..+.... ..+. ......+|..|||||++.. ..++.|+|||||||++|||+||+
T Consensus 797 H~~~~~~iiH~dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~sDv~S~Gvvl~el~tg~ 875 (968)
T PLN00113 797 HCRCSPAVVVGNLSPEKIIIDGKDEPHLRLSLPGLLCTDTKCFISSAYVAPETRET-KDITEKSDIYGFGLILIELLTGK 875 (968)
T ss_pred ccCCCCCeecCCCCHHhEEECCCCceEEEeccccccccCCCccccccccCcccccC-CCCCcccchhhHHHHHHHHHhCC
Confidence 2344455554443332211 1111 1122357789999999554 68999999999999999999999
Q ss_pred CCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhh-hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 506 LPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKE-IHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 506 ~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.||+........+.+|.+...... .....+|+.+... ....+++.++.+++.+||+.||++||||+||+++|+++.
T Consensus 876 ~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~ 952 (968)
T PLN00113 876 SPADAEFGVHGSIVEWARYCYSDC-HLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESAS 952 (968)
T ss_pred CCCCcccCCCCcHHHHHHHhcCcc-chhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhh
Confidence 999755444556677766544332 2334455544321 122356678899999999999999999999999999874
|
|
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=335.82 Aligned_cols=239 Identities=32% Similarity=0.495 Sum_probs=195.4
Q ss_pred cccchhhHhhhc-----ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceee
Q 007935 335 FSLELEDLLRAS-----AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409 (584)
Q Consensus 335 ~~~~~~~l~~~~-----~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~ 409 (584)
..|+++++..|| .++||+|+||.||+|.+.++ +.||||++....... .++|.+|++++++++|||+|+
T Consensus 63 ~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~------~~vAVK~~~~~~~~~-~~eF~~Ei~~ls~l~H~Nlv~ 135 (361)
T KOG1187|consen 63 RSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDG------TVVAVKRLSSNSGQG-EREFLNEVEILSRLRHPNLVK 135 (361)
T ss_pred ceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCC------CEEEEEEecCCCCcc-hhHHHHHHHHHhcCCCcCccc
Confidence 458889999887 37999999999999999998 799999988754432 367999999999999999999
Q ss_pred eeEEEEeCC-ceeEeeecccCCcHHHHHhcc--------------------------------cccccCCCCccccccCe
Q 007935 410 LKAFYYAND-EKLLISDFIRNGSLYAALHGF--------------------------------GLNRLLPGTSKVTKNET 456 (584)
Q Consensus 410 l~g~~~~~~-~~~lV~Ey~~~GsL~~~L~~~--------------------------------g~~~~~~~~~~i~~~~~ 456 (584)
|+|||.+.+ +.+||||||++|+|.++||+. -|+++++.|+.++.+-.
T Consensus 136 LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~ 215 (361)
T KOG1187|consen 136 LLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFN 215 (361)
T ss_pred EEEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCC
Confidence 999999999 499999999999999888752 23555555555555555
Q ss_pred EEecCCCccc---c---------cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCC-CCCCcHHHHHH
Q 007935 457 IVTSGTGSRI---S---------AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPE-NDGKGLESLVR 523 (584)
Q Consensus 457 ~~~~~~~~~~---~---------~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~-~~~~~l~~~~~ 523 (584)
.+..|||... . .||.+|+|||+... ...|+|+|||||||+|+||+||+.|.+... .....+..|+.
T Consensus 216 aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~-g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~ 294 (361)
T KOG1187|consen 216 AKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYAST-GKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAK 294 (361)
T ss_pred EEccCccCcccCCccccceeeecCCCCccCChhhhcc-CCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHH
Confidence 5666765211 1 79999999999666 589999999999999999999999887543 33445888887
Q ss_pred HHhhcCCCCccccChhhh-hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 524 KAFRERRPLSEVIDPALV-KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 524 ~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
...... .+.+++||.+. ......+++.++.++|.+|++.+|++||+|.||+++|+.+.
T Consensus 295 ~~~~~~-~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~ 353 (361)
T KOG1187|consen 295 PLLEEG-KLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGIL 353 (361)
T ss_pred HHHHCc-chhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence 777666 57899999987 33222368899999999999999999999999999997765
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-39 Score=334.43 Aligned_cols=219 Identities=26% Similarity=0.380 Sum_probs=181.0
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
..+.||+|+||+||+|+..........+.||||.++...+.+.+++|.||+++++.++|||||+|+|+|.+++..++|+|
T Consensus 490 ~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvFE 569 (774)
T KOG1026|consen 490 FKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVFE 569 (774)
T ss_pred ehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEEE
Confidence 35679999999999999887765666689999999998777677999999999999999999999999999999999999
Q ss_pred cccCCcHHHHHhc-----------------------------------------ccccccCCCCccccccCeEEecCCCc
Q 007935 426 FIRNGSLYAALHG-----------------------------------------FGLNRLLPGTSKVTKNETIVTSGTGS 464 (584)
Q Consensus 426 y~~~GsL~~~L~~-----------------------------------------~g~~~~~~~~~~i~~~~~~~~~~~~~ 464 (584)
||..|||.+||.. |.|+|+..+|..|...-.+++.|+|.
T Consensus 570 Ym~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VKIsDfGL 649 (774)
T KOG1026|consen 570 YMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVKISDFGL 649 (774)
T ss_pred ecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceEEEeccccc
Confidence 9999999999852 46888888999998888999999986
Q ss_pred ccc-------------cCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCC
Q 007935 465 RIS-------------AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERR 530 (584)
Q Consensus 465 ~~~-------------~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~ 530 (584)
+.. .-..+||+||.++. .+||++||||||||||||++| |+.||.+...++ ..+. .+.+.
T Consensus 650 sRdiYssDYYk~~~~t~lPIRWMppEsIly-~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~E--VIe~----i~~g~ 722 (774)
T KOG1026|consen 650 SRDIYSSDYYKVRGNTLLPIRWMPPESILY-GKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQE--VIEC----IRAGQ 722 (774)
T ss_pred chhhhhhhhhcccCCceeeeecCCHHHhhc-CcccchhhhhhhhhhhhhhhccccCcccccchHH--HHHH----HHcCC
Confidence 542 12456999999887 589999999999999999999 999998754432 2222 22221
Q ss_pred CCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 531 PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 531 ~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
-+ ..++.+..++++||..||+.+|++||+++||-.+|+...
T Consensus 723 lL-----------~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~ 763 (774)
T KOG1026|consen 723 LL-----------SCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWA 763 (774)
T ss_pred cc-----------cCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHH
Confidence 11 122345567888999999999999999999999998764
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-36 Score=286.17 Aligned_cols=219 Identities=24% Similarity=0.371 Sum_probs=182.2
Q ss_pred cchhhHhhhcceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEe
Q 007935 337 LELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYA 416 (584)
Q Consensus 337 ~~~~~l~~~~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~ 416 (584)
+++.|+. ..++||+|..|+|||++++.++ +.+|+|.+.........+++.+|++++.+.+||+||++||.|..
T Consensus 76 i~~~dle--~~~~lG~G~gG~V~kv~Hk~t~-----~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~ 148 (364)
T KOG0581|consen 76 ISLSDLE--RLGVLGSGNGGTVYKVRHKPTG-----KIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYS 148 (364)
T ss_pred cCHHHhh--hhhhcccCCCcEEEEEEEcCCC-----eEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEe
Confidence 4455554 3468999999999999999987 89999999776666667899999999999999999999999999
Q ss_pred CCc-eeEeeecccCCcHHHHHh-------------------------c---ccccccCCCCccccccCeEEecCCCcc--
Q 007935 417 NDE-KLLISDFIRNGSLYAALH-------------------------G---FGLNRLLPGTSKVTKNETIVTSGTGSR-- 465 (584)
Q Consensus 417 ~~~-~~lV~Ey~~~GsL~~~L~-------------------------~---~g~~~~~~~~~~i~~~~~~~~~~~~~~-- 465 (584)
++. ..++||||++|||.+.+. + ..|+|+++.|..+...+.++..|||.+
T Consensus 149 ~~~~isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~ 228 (364)
T KOG0581|consen 149 NGEEISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGI 228 (364)
T ss_pred CCceEEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHH
Confidence 994 999999999999965553 2 257999999999999999999999843
Q ss_pred -------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC-CCcc-cc
Q 007935 466 -------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR-PLSE-VI 536 (584)
Q Consensus 466 -------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~~-~~ 536 (584)
..+||..|||||. ..|..|+.++||||||++++|+.+|+.||........+..+++..+..+.. .+++ .+
T Consensus 229 lvnS~a~tfvGT~~YMsPER-i~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~f 307 (364)
T KOG0581|consen 229 LVNSIANTFVGTSAYMSPER-ISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEF 307 (364)
T ss_pred hhhhhcccccccccccChhh-hcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccC
Confidence 3589999999998 556799999999999999999999999998754445567777777776443 3444 37
Q ss_pred ChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 537 DPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 537 d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
++++..++.. |+++||.+|||+.|+++
T Consensus 308 S~ef~~FV~~-------------CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 308 SPEFRSFVSC-------------CLRKDPSERPSAKQLLQ 334 (364)
T ss_pred CHHHHHHHHH-------------HhcCCcccCCCHHHHhc
Confidence 7777665544 99999999999999975
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-37 Score=305.43 Aligned_cols=211 Identities=26% Similarity=0.369 Sum_probs=173.4
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
..+.||+|-||.||.|.+... ..||||.++...... +.|.+|+++|++|+|+|||+++|+|..++.++||||
T Consensus 210 l~~~LG~G~FG~V~~g~~~~~------~~vavk~ik~~~m~~--~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE 281 (468)
T KOG0197|consen 210 LIRELGSGQFGEVWLGKWNGS------TKVAVKTIKEGSMSP--EAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTE 281 (468)
T ss_pred HHHHhcCCccceEEEEEEcCC------CcccceEEeccccCh--hHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEE
Confidence 456799999999999999887 689999998863332 789999999999999999999999999999999999
Q ss_pred cccCCcHHHHHhc-----------------------------ccccccCCCCccccccCeEEecCCCccccc--------
Q 007935 426 FIRNGSLYAALHG-----------------------------FGLNRLLPGTSKVTKNETIVTSGTGSRISA-------- 468 (584)
Q Consensus 426 y~~~GsL~~~L~~-----------------------------~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~-------- 468 (584)
||++|+|.+||+. +.|+|+.+.|+++..+..+++.|||.+...
T Consensus 282 ~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~ 361 (468)
T KOG0197|consen 282 YMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTAS 361 (468)
T ss_pred ecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCCCceeec
Confidence 9999999999974 258999999999999999999999865432
Q ss_pred ----CCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCC-CccccChhhhh
Q 007935 469 ----ISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP-LSEVIDPALVK 542 (584)
Q Consensus 469 ----gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~d~~~~~ 542 (584)
....|.|||.+.. ..++.|||||||||+||||+| |+.||... ...+.+...-++.+- -++
T Consensus 362 ~~~kfPIkWtAPEa~~~-~~FS~kSDVWSFGVlL~E~fT~G~~py~~m-----sn~ev~~~le~GyRlp~P~-------- 427 (468)
T KOG0197|consen 362 EGGKFPIKWTAPEALNY-GKFSSKSDVWSFGVLLWELFTYGRVPYPGM-----SNEEVLELLERGYRLPRPE-------- 427 (468)
T ss_pred CCCCCCceecCHHHHhh-CCcccccceeehhhhHHHHhccCCCCCCCC-----CHHHHHHHHhccCcCCCCC--------
Confidence 2345999999776 589999999999999999999 99998753 333444333332221 112
Q ss_pred hhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 543 EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 543 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
.|...++++|..||+.+|++|||++.+...|+++..
T Consensus 428 -----~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~ 463 (468)
T KOG0197|consen 428 -----GCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFT 463 (468)
T ss_pred -----CCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhh
Confidence 233456779999999999999999999999988754
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-36 Score=299.89 Aligned_cols=213 Identities=27% Similarity=0.367 Sum_probs=166.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc-chhhHhHHHHHHHHHhcCCCceeeeeEEEEeCC-ceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPNIVRLKAFYYAND-EKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~-~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~-~~~lV~ 424 (584)
...||+|+||+||+|.+.+. ..||||++..... ....++|.+|+.+|++++|||||+++|+|.+.. ..++||
T Consensus 46 ~~~iG~G~~g~V~~~~~~g~------~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVt 119 (362)
T KOG0192|consen 46 EEVLGSGSFGTVYKGKWRGT------DVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVT 119 (362)
T ss_pred hhhcccCCceeEEEEEeCCc------eeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEE
Confidence 34599999999999999886 4599999987532 222579999999999999999999999999988 799999
Q ss_pred ecccCCcHHHHHhc---------------------------c---cccccCCCCccccccC-eEEecCCCccc-------
Q 007935 425 DFIRNGSLYAALHG---------------------------F---GLNRLLPGTSKVTKNE-TIVTSGTGSRI------- 466 (584)
Q Consensus 425 Ey~~~GsL~~~L~~---------------------------~---g~~~~~~~~~~i~~~~-~~~~~~~~~~~------- 466 (584)
|||++|+|.++||. . .|+|+++.|..+..+. .+++.|||...
T Consensus 120 Ey~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~ 199 (362)
T KOG0192|consen 120 EYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKT 199 (362)
T ss_pred EeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeeccccc
Confidence 99999999888754 1 3577777888787775 88888887431
Q ss_pred ----ccCCCcccCcccccc-CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHh-hc-CCCCccccChh
Q 007935 467 ----SAISNVYLAPEARIY-GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF-RE-RRPLSEVIDPA 539 (584)
Q Consensus 467 ----~~gt~~y~aPE~~~~-~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~-~~-~~~~~~~~d~~ 539 (584)
..||..|||||++.. ...|+.|+|||||||+||||+||+.||.+... .+.+.... .. ++.++...++.
T Consensus 200 ~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~-----~~~~~~v~~~~~Rp~~p~~~~~~ 274 (362)
T KOG0192|consen 200 SMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP-----VQVASAVVVGGLRPPIPKECPPH 274 (362)
T ss_pred cccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHhcCCCCCCCccCCHH
Confidence 478999999999653 36899999999999999999999999986432 22222222 22 22223333333
Q ss_pred hhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 540 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
+..++.+||+.||+.||++.|++..|+.+..
T Consensus 275 -------------l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~ 305 (362)
T KOG0192|consen 275 -------------LSSLMERCWLVDPSRRPSFLEIVSRLESIMS 305 (362)
T ss_pred -------------HHHHHHHhCCCCCCcCCCHHHHHHHHHHHHH
Confidence 3446777999999999999999999998753
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-37 Score=316.42 Aligned_cols=216 Identities=26% Similarity=0.390 Sum_probs=178.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
+++||.|.||.||+|+++..+... ..||||.++....+.++.+|+.|+.||.+++||||++|.|+.......++|.||
T Consensus 634 e~VIGaGEFGEVc~GrLk~pgkre--~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEy 711 (996)
T KOG0196|consen 634 EKVIGAGEFGEVCSGRLKLPGKRE--ITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITEY 711 (996)
T ss_pred EEEEecccccceecccccCCCCcc--eeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhhh
Confidence 689999999999999998765332 789999999988778889999999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc----------------------------ccccccCCCCccccccCeEEecCCCcccc-----------
Q 007935 427 IRNGSLYAALHG----------------------------FGLNRLLPGTSKVTKNETIVTSGTGSRIS----------- 467 (584)
Q Consensus 427 ~~~GsL~~~L~~----------------------------~g~~~~~~~~~~i~~~~~~~~~~~~~~~~----------- 467 (584)
|+||+|..||+. +.|+|+.++|+++..+-..+.+|||.+..
T Consensus 712 MENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~ytt 791 (996)
T KOG0196|consen 712 MENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTT 791 (996)
T ss_pred hhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeecccCCCccccc
Confidence 999999999974 24788888898888888888888875531
Q ss_pred ---cCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhh
Q 007935 468 ---AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKE 543 (584)
Q Consensus 468 ---~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~ 543 (584)
.....|.|||.+.. +++|.+||||||||||||.++ |.+||-+..+. +... ...+...++.-
T Consensus 792 ~GGKIPiRWTAPEAIa~-RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQ--dVIk----aIe~gyRLPpP-------- 856 (996)
T KOG0196|consen 792 LGGKIPIRWTAPEAIAY-RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ--DVIK----AIEQGYRLPPP-------- 856 (996)
T ss_pred cCCccceeecChhHhhh-cccCchhhccccceEEEEecccCCCcccccchH--HHHH----HHHhccCCCCC--------
Confidence 22356999999666 799999999999999999988 99998765432 1222 22233333332
Q ss_pred hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 544 IHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 544 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
++|...+++||+.||++|..+||++.||+.+|+++-
T Consensus 857 ---mDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklI 892 (996)
T KOG0196|consen 857 ---MDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLI 892 (996)
T ss_pred ---CCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHh
Confidence 245557788999999999999999999999999874
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-35 Score=282.54 Aligned_cols=213 Identities=21% Similarity=0.362 Sum_probs=162.6
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcch------hhHhHHHHHHHHHhcCCCceeeeeEEEEeCCc
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATW------RFKDFESEVEAIARVQHPNIVRLKAFYYANDE 419 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~------~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~ 419 (584)
..+.+|+|+||.|-+|..++++ +.||||++++..... ......+|+++|++++|||||++++++...+.
T Consensus 176 i~~~LGsGafg~Vkla~e~~tg-----k~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds 250 (475)
T KOG0615|consen 176 ISKTLGSGAFGLVKLAYEKKTG-----KQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS 250 (475)
T ss_pred eeeeecCCceeEEEEEEEcccC-----cEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence 4578999999999999998887 899999998762211 11234699999999999999999999999999
Q ss_pred eeEeeecccCCcHHH-------------------------HHhccc--ccccCCCCcccccc---CeEEecCCCc-----
Q 007935 420 KLLISDFIRNGSLYA-------------------------ALHGFG--LNRLLPGTSKVTKN---ETIVTSGTGS----- 464 (584)
Q Consensus 420 ~~lV~Ey~~~GsL~~-------------------------~L~~~g--~~~~~~~~~~i~~~---~~~~~~~~~~----- 464 (584)
.|+|||||+||+|++ |||+.| |+|++++|+.+..+ -.+++.|||.
T Consensus 251 ~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g 330 (475)
T KOG0615|consen 251 SYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSG 330 (475)
T ss_pred eEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhccc
Confidence 999999999999954 456655 68999999887666 3455677763
Q ss_pred -----ccccCCCcccCccccccCC--CCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccC
Q 007935 465 -----RISAISNVYLAPEARIYGS--KFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVID 537 (584)
Q Consensus 465 -----~~~~gt~~y~aPE~~~~~~--~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d 537 (584)
.+.+||+.|.|||++.... .+..|+|+||+|||||-+++|.+||.+...+. . +..+...++..+....+
T Consensus 331 ~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~-s---l~eQI~~G~y~f~p~~w 406 (475)
T KOG0615|consen 331 EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP-S---LKEQILKGRYAFGPLQW 406 (475)
T ss_pred cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc-c---HHHHHhcCcccccChhh
Confidence 2458999999999975432 23458999999999999999999998754432 1 22333344433332222
Q ss_pred hhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 538 PALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.++ .++..+++.++|..||++|||+.|+++
T Consensus 407 ~~I---------seea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 407 DRI---------SEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred hhh---------hHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 222 124566888899999999999999985
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-34 Score=288.71 Aligned_cols=207 Identities=21% Similarity=0.284 Sum_probs=175.3
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC--CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEe
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG--DATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLI 423 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV 423 (584)
.+++||+|||+.||+++....+ ..||+|++.+. .....++...+||+|.++|+|||||+++++|++.+++|+|
T Consensus 22 ~g~~LGkGgFA~cYe~~~~~tg-----e~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYiv 96 (592)
T KOG0575|consen 22 RGRFLGKGGFARCYEARDLDTG-----EVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIV 96 (592)
T ss_pred eeeeeccCcceEEEEEEEcCCC-----cEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEE
Confidence 4678999999999999996665 89999999875 3444568899999999999999999999999999999999
Q ss_pred eecccCCcHHHHH-------------------------hcc--cccccCCCCccccccCeEEecCCCccc----------
Q 007935 424 SDFIRNGSLYAAL-------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 424 ~Ey~~~GsL~~~L-------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
.|+|++|+|.+++ |+. -|+|++-+|..+..+..+++.|||.+.
T Consensus 97 LELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk~ 176 (592)
T KOG0575|consen 97 LELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERKK 176 (592)
T ss_pred EEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCcccccc
Confidence 9999999996554 333 468888899888888889999988543
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIH 545 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~ 545 (584)
.+||+.|+|||++. ...++..+||||+|||||.|++|++||+ ...+.+....+......++..++.+..+++.
T Consensus 177 TlCGTPNYIAPEVl~-k~gHsfEvDiWSlGcvmYtLL~G~PPFe-----tk~vkety~~Ik~~~Y~~P~~ls~~A~dLI~ 250 (592)
T KOG0575|consen 177 TLCGTPNYIAPEVLN-KSGHSFEVDIWSLGCVMYTLLVGRPPFE-----TKTVKETYNKIKLNEYSMPSHLSAEAKDLIR 250 (592)
T ss_pred eecCCCcccChhHhc-cCCCCCchhhhhhhhHHHhhhhCCCCcc-----cchHHHHHHHHHhcCcccccccCHHHHHHHH
Confidence 48999999999965 4788999999999999999999999998 3457777777777777777777777665554
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 546 AKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
. .|++||.+|||+++|+.
T Consensus 251 ~-------------lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 251 K-------------LLRPNPSERPSLDEVLD 268 (592)
T ss_pred H-------------HhcCCcccCCCHHHHhc
Confidence 4 99999999999999984
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=277.16 Aligned_cols=156 Identities=23% Similarity=0.346 Sum_probs=136.3
Q ss_pred eceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeecc
Q 007935 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (584)
Q Consensus 349 ~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 427 (584)
.||+|+||+||+|+++..+ ..||||.+.+.. ....++....|+++|+.++|||||+|+++++.++..|||||||
T Consensus 17 ~iG~GsfavVykg~h~~~~-----~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEyC 91 (429)
T KOG0595|consen 17 EIGSGSFAVVYKGRHKKSG-----TEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVMEYC 91 (429)
T ss_pred hccCcceEEEEEeEeccCC-----ceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEEeC
Confidence 3999999999999999887 899999998763 4445577899999999999999999999999999999999999
Q ss_pred cCCcHHHHHhcc---------------------------cccccCCCCcccccc------CeEEecCCCcc---------
Q 007935 428 RNGSLYAALHGF---------------------------GLNRLLPGTSKVTKN------ETIVTSGTGSR--------- 465 (584)
Q Consensus 428 ~~GsL~~~L~~~---------------------------g~~~~~~~~~~i~~~------~~~~~~~~~~~--------- 465 (584)
.+|||.+||+.+ .|+|+++.|+.+... -..++.|||..
T Consensus 92 ~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~a 171 (429)
T KOG0595|consen 92 NGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGSMA 171 (429)
T ss_pred CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchhHH
Confidence 999999998753 479999999876654 34566777743
Q ss_pred -cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCC
Q 007935 466 -ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAG 510 (584)
Q Consensus 466 -~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~ 510 (584)
..+|++.|||||++.. ++|+.|+|+||.|+++||+++|+.||+.
T Consensus 172 ~tlcGSplYMAPEV~~~-~~YdAKADLWSiG~Ilyq~l~g~~Pf~a 216 (429)
T KOG0595|consen 172 ETLCGSPLYMAPEVIMS-QQYDAKADLWSIGTILYQCLTGKPPFDA 216 (429)
T ss_pred HHhhCCccccCHHHHHh-ccccchhhHHHHHHHHHHHHhCCCCccc
Confidence 3489999999999665 7999999999999999999999999985
|
|
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=310.72 Aligned_cols=219 Identities=25% Similarity=0.386 Sum_probs=177.9
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
..++||+|+||.||+|...+-.+......||||.+++..+.+...+|.+|..+|++++|||||+++|+|.+....++++|
T Consensus 696 l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~le 775 (1025)
T KOG1095|consen 696 LLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILLE 775 (1025)
T ss_pred eeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEeh
Confidence 46899999999999999988765544678999999998777778999999999999999999999999999999999999
Q ss_pred cccCCcHHHHHhc----------------------------------ccccccCCCCccccccCeEEecCCCcccc----
Q 007935 426 FIRNGSLYAALHG----------------------------------FGLNRLLPGTSKVTKNETIVTSGTGSRIS---- 467 (584)
Q Consensus 426 y~~~GsL~~~L~~----------------------------------~g~~~~~~~~~~i~~~~~~~~~~~~~~~~---- 467 (584)
||++|||..||++ |.|+|+.++|+.+.....+++.|||....
T Consensus 776 yM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~ 855 (1025)
T KOG1095|consen 776 YMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGLARDIYDK 855 (1025)
T ss_pred hcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccchhHhhhhc
Confidence 9999999999864 46788888898888888888888885441
Q ss_pred ---------cCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccC
Q 007935 468 ---------AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVID 537 (584)
Q Consensus 468 ---------~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d 537 (584)
.-...|||||.+.+ ..+|+|+|||||||+|||++| |..||.+... .+.+.....+.+ +.
T Consensus 856 ~yyr~~~~a~lPvkWm~PEsl~d-~iFtskSDvWsFGVllWEifslG~~PY~~~~n-----~~v~~~~~~ggR-L~---- 924 (1025)
T KOG1095|consen 856 DYYRKHGEAMLPVKWMPPESLKD-GIFTSKSDVWSFGVLLWEIFSLGATPYPSRSN-----FEVLLDVLEGGR-LD---- 924 (1025)
T ss_pred hheeccCccccceecCCHHHHhh-cccccccchhhhHHHHHHHHhCCCCCCCCcch-----HHHHHHHHhCCc-cC----
Confidence 11246999999877 589999999999999999999 9999985433 222222222221 11
Q ss_pred hhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 538 PALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.+..|..+++++|..||+.+|++||++..+++.+.++.
T Consensus 925 -------~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~ 962 (1025)
T KOG1095|consen 925 -------PPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAIS 962 (1025)
T ss_pred -------CCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhh
Confidence 11234456778999999999999999999999888764
|
|
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=280.94 Aligned_cols=211 Identities=25% Similarity=0.406 Sum_probs=173.7
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
..+.||-|.||.||.|.|++.. ..||||.++... ...++|+.|+.+|+.++|||+|+|+|+|..+..+|||.|
T Consensus 271 MkhKLGGGQYGeVYeGvWKkys-----lTvAVKtLKEDt--MeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTE 343 (1157)
T KOG4278|consen 271 MKHKLGGGQYGEVYEGVWKKYS-----LTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITE 343 (1157)
T ss_pred eeeccCCCcccceeeeeeeccc-----eeeehhhhhhcc--hhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEe
Confidence 4678999999999999999886 899999998743 345999999999999999999999999999999999999
Q ss_pred cccCCcHHHHHhc-----------------------------ccccccCCCCccccccCeEEecCCCcccc---------
Q 007935 426 FIRNGSLYAALHG-----------------------------FGLNRLLPGTSKVTKNETIVTSGTGSRIS--------- 467 (584)
Q Consensus 426 y~~~GsL~~~L~~-----------------------------~g~~~~~~~~~~i~~~~~~~~~~~~~~~~--------- 467 (584)
||.+|+|.+||++ |.|+++.+.|+.+..+..++..+||....
T Consensus 344 fM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAH 423 (1157)
T KOG4278|consen 344 FMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAH 423 (1157)
T ss_pred cccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhcCCceecc
Confidence 9999999999974 57899999999988888888888874331
Q ss_pred c---CCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhh
Q 007935 468 A---ISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKE 543 (584)
Q Consensus 468 ~---gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~ 543 (584)
+ ....|.|||.+.. ..++.|+|||+|||+|||+.| |..||.+.+.. ....++.+.++.+.+
T Consensus 424 AGAKFPIKWTAPEsLAy-NtFSiKSDVWAFGVLLWEIATYGMsPYPGidlS--qVY~LLEkgyRM~~P------------ 488 (1157)
T KOG4278|consen 424 AGAKFPIKWTAPESLAY-NTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYGLLEKGYRMDGP------------ 488 (1157)
T ss_pred cCccCcccccCcccccc-cccccchhhHHHHHHHHHHHhcCCCCCCCccHH--HHHHHHhccccccCC------------
Confidence 2 2345999999766 589999999999999999999 88999853321 223334444433322
Q ss_pred hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhh
Q 007935 544 IHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581 (584)
Q Consensus 544 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 581 (584)
+.|..++++||..||+.+|.+||+++|+-++++.+
T Consensus 489 ---eGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtm 523 (1157)
T KOG4278|consen 489 ---EGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETM 523 (1157)
T ss_pred ---CCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHH
Confidence 23445678899999999999999999999999876
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-33 Score=264.07 Aligned_cols=199 Identities=22% Similarity=0.353 Sum_probs=166.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC--CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG--DATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
-++||+|+||+||.++..+++ +.+|+|++++. ......+...+|..+|.+++||.||+++-.|++.+..|||+
T Consensus 30 lkviGkG~fGkV~~Vrk~dt~-----kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVl 104 (357)
T KOG0598|consen 30 LKVIGKGSFGKVFQVRKKDTG-----KIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVL 104 (357)
T ss_pred eeeeeccCCceEEEEEEcccC-----ceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEE
Confidence 478999999999999999887 89999999887 22334577899999999999999999999999999999999
Q ss_pred ecccCCcHHHHH-------------------------hccc--ccccCCCCccccccCeEEecCCCc-----------cc
Q 007935 425 DFIRNGSLYAAL-------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGS-----------RI 466 (584)
Q Consensus 425 Ey~~~GsL~~~L-------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~-----------~~ 466 (584)
||+.||.|+.+| |+.| ++|++++|+.+..+++++..|+|. ..
T Consensus 105 d~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~~t~t 184 (357)
T KOG0598|consen 105 DYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGDATRT 184 (357)
T ss_pred eccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcccCCCcccc
Confidence 999999996555 4444 489999999999999999988863 33
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcC-CCCccccChhhhhhhh
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER-RPLSEVIDPALVKEIH 545 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~d~~~~~~~~ 545 (584)
.+||+.|||||++.. ..|+..+|.||+||++|||++|.+||.. .+...+.+.....+ ...+..++++..+.+.
T Consensus 185 fcGT~eYmAPEil~~-~gy~~~vDWWsLGillYeML~G~pPF~~-----~~~~~~~~~I~~~k~~~~p~~ls~~ardll~ 258 (357)
T KOG0598|consen 185 FCGTPEYMAPEILLG-KGYDKAVDWWSLGILLYEMLTGKPPFYA-----EDVKKMYDKILKGKLPLPPGYLSEEARDLLK 258 (357)
T ss_pred ccCCccccChHHHhc-CCCCcccchHhHHHHHHHHhhCCCCCcC-----ccHHHHHHHHhcCcCCCCCccCCHHHHHHHH
Confidence 589999999999666 6899999999999999999999999984 34566777777766 3344557777665444
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCC
Q 007935 546 AKRQVLATFHIALNCTELDPEFRP 569 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RP 569 (584)
. .+..||++|-
T Consensus 259 ~-------------LL~rdp~~RL 269 (357)
T KOG0598|consen 259 K-------------LLKRDPRQRL 269 (357)
T ss_pred H-------------HhccCHHHhc
Confidence 4 8999999995
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=257.20 Aligned_cols=207 Identities=23% Similarity=0.330 Sum_probs=164.4
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCC-CcchhhHhHHHHHHHHHhcCCCceeeeeE-EEEeCCc-eeEee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARVQHPNIVRLKA-FYYANDE-KLLIS 424 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g-~~~~~~~-~~lV~ 424 (584)
+.||+|.||.|||+....++ ..||.|.++-+ .+...++....|+.+|++++|||||++++ .+.++.+ .+|||
T Consensus 25 ~~IG~GsFg~vykv~~~~~g-----~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivm 99 (375)
T KOG0591|consen 25 KKIGRGSFGEVYKVQCLLDG-----KLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVM 99 (375)
T ss_pred HHHcCCcchheEEeeeccCc-----chhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHH
Confidence 46999999999999987776 89999999865 34445678999999999999999999999 4555555 89999
Q ss_pred ecccCCcHHHHHhc-----------------------------------ccccccCCCCccccccCeEEecCCCcc----
Q 007935 425 DFIRNGSLYAALHG-----------------------------------FGLNRLLPGTSKVTKNETIVTSGTGSR---- 465 (584)
Q Consensus 425 Ey~~~GsL~~~L~~-----------------------------------~g~~~~~~~~~~i~~~~~~~~~~~~~~---- 465 (584)
|||+.|||...++. .-|+|+++.|+.+..++.++..|+|..
T Consensus 100 E~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~ 179 (375)
T KOG0591|consen 100 ELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLS 179 (375)
T ss_pred HhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhc
Confidence 99999999766542 137899999998888888888887732
Q ss_pred -------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC-Cc-ccc
Q 007935 466 -------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP-LS-EVI 536 (584)
Q Consensus 466 -------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~-~~-~~~ 536 (584)
..+||+.||+||.+. +..|+.||||||+||++|||+.-++||.+ .++.++.+++.....+ ++ +.+
T Consensus 180 s~~tfA~S~VGTPyYMSPE~i~-~~~Y~~kSDiWslGCllyEMcaL~~PF~g-----~n~~~L~~KI~qgd~~~~p~~~Y 253 (375)
T KOG0591|consen 180 SKTTFAHSLVGTPYYMSPERIH-ESGYNFKSDIWSLGCLLYEMCALQSPFYG-----DNLLSLCKKIEQGDYPPLPDEHY 253 (375)
T ss_pred chhHHHHhhcCCCcccCHHHHh-cCCCCcchhHHHHHHHHHHHHhcCCCccc-----ccHHHHHHHHHcCCCCCCcHHHh
Confidence 248999999999954 47999999999999999999999999985 3666776666655432 33 333
Q ss_pred ChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHH
Q 007935 537 DPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 578 (584)
Q Consensus 537 d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L 578 (584)
+. .+.+|+..|+..||+.||+...+++.+
T Consensus 254 S~-------------~l~~li~~ci~vd~~~RP~t~~~v~di 282 (375)
T KOG0591|consen 254 ST-------------DLRELINMCIAVDPEQRPDTVPYVQDI 282 (375)
T ss_pred hh-------------HHHHHHHHHccCCcccCCCcchHHHHH
Confidence 33 334466669999999999865555444
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-32 Score=262.53 Aligned_cols=215 Identities=21% Similarity=0.310 Sum_probs=169.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
..+||.|..++||+|+....+ ..||||++....-....+.+.+|++.|+.++|||||+++..|..+.+.|+||.|
T Consensus 31 ~e~IG~G~sa~V~~A~c~p~~-----e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpf 105 (516)
T KOG0582|consen 31 QEVIGVGASAVVYLARCIPTN-----EVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPF 105 (516)
T ss_pred EEEEeccceeEeeeeeecccC-----CEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehh
Confidence 468999999999999988776 899999998875555568999999999999999999999999999999999999
Q ss_pred ccCCcHH---------------------------HHHhccc--ccccCCCCccccccCeEEecCCCc-------------
Q 007935 427 IRNGSLY---------------------------AALHGFG--LNRLLPGTSKVTKNETIVTSGTGS------------- 464 (584)
Q Consensus 427 ~~~GsL~---------------------------~~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~------------- 464 (584)
|.+||+. +|||..| |++++++|+.|..++.+...||+.
T Consensus 106 Ma~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~~~ 185 (516)
T KOG0582|consen 106 MAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQVT 185 (516)
T ss_pred hcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeecccCceeeE
Confidence 9999984 5666555 699999999999999999888752
Q ss_pred --ccccCCCcccCccc-cccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCcc--ccChh
Q 007935 465 --RISAISNVYLAPEA-RIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSE--VIDPA 539 (584)
Q Consensus 465 --~~~~gt~~y~aPE~-~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~d~~ 539 (584)
....||+.|||||+ ......|+.|+||||||++..||.+|..||..... +.-++. .+...++... ..+.+
T Consensus 186 rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pP----mkvLl~-tLqn~pp~~~t~~~~~d 260 (516)
T KOG0582|consen 186 RFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPP----MKVLLL-TLQNDPPTLLTSGLDKD 260 (516)
T ss_pred eeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCCh----HHHHHH-HhcCCCCCcccccCChH
Confidence 23479999999999 44446799999999999999999999999975332 222222 2333332111 11221
Q ss_pred hhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 540 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
-. ...-..+.+++-.|+++||.+|||++++++
T Consensus 261 ~~-----k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 261 ED-----KKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred Hh-----hhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 11 112235667788899999999999999974
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.9e-33 Score=274.24 Aligned_cols=202 Identities=22% Similarity=0.335 Sum_probs=158.4
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeecc
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 427 (584)
+-+|.|+.|.||.|++.+ ..||||+++.-. ..+|+-|++|+||||+.+.|+|.....++||||||
T Consensus 130 eWlGSGaQGAVF~Grl~n-------etVAVKKV~elk--------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfC 194 (904)
T KOG4721|consen 130 EWLGSGAQGAVFLGRLHN-------ETVAVKKVRELK--------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFC 194 (904)
T ss_pred hhhccCcccceeeeeccC-------ceehhHHHhhhh--------hhhHHHHHhccCcceeeEeeeecCCceeEEeeecc
Confidence 469999999999999988 589999887532 25788999999999999999999999999999999
Q ss_pred cCCcHHHHHh---------------------------cccccccCCCCccccccCeEEecCCCccc----------ccCC
Q 007935 428 RNGSLYAALH---------------------------GFGLNRLLPGTSKVTKNETIVTSGTGSRI----------SAIS 470 (584)
Q Consensus 428 ~~GsL~~~L~---------------------------~~g~~~~~~~~~~i~~~~~~~~~~~~~~~----------~~gt 470 (584)
+.|-|+..|+ ...|+|++.-|++|..+..+++.|||++. .+||
T Consensus 195 a~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSFaGT 274 (904)
T KOG4721|consen 195 AQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSFAGT 274 (904)
T ss_pred ccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhhhhhhhhhhhh
Confidence 9999965554 34678899999999999999999998653 4899
Q ss_pred CcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHHHH
Q 007935 471 NVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQV 550 (584)
Q Consensus 471 ~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 550 (584)
..|||||++.. ...++|+||||||||||||+||..||.+.+.... .|=...-....+++.. +.
T Consensus 275 VaWMAPEvIrn-ePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAI---IwGVGsNsL~LpvPst-------------cP 337 (904)
T KOG4721|consen 275 VAWMAPEVIRN-EPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAI---IWGVGSNSLHLPVPST-------------CP 337 (904)
T ss_pred HhhhCHHHhhc-CCcccccceehhHHHHHHHHhcCCCccccchhee---EEeccCCcccccCccc-------------Cc
Confidence 99999999554 7999999999999999999999999975332210 0000000001112222 22
Q ss_pred HHHHHHHhcccCCCCCCCCChHHHHHHHHhh
Q 007935 551 LATFHIALNCTELDPEFRPRMRTVSESLDRV 581 (584)
Q Consensus 551 ~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 581 (584)
.-+.-|+..||+..|..||++++|+..|+-.
T Consensus 338 ~GfklL~Kqcw~sKpRNRPSFrqil~HldIa 368 (904)
T KOG4721|consen 338 DGFKLLLKQCWNSKPRNRPSFRQILLHLDIA 368 (904)
T ss_pred hHHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence 2333477779999999999999999988743
|
|
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.1e-32 Score=269.15 Aligned_cols=220 Identities=23% Similarity=0.323 Sum_probs=173.9
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
..+.||+|-||.|..+..... ..||||.++.......+++|.+||++|++++|||||+|+|+|..++..++|+|
T Consensus 542 ~~ekiGeGqFGEVhLCeveg~------lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~E 615 (807)
T KOG1094|consen 542 FKEKIGEGQFGEVHLCEVEGP------LKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITE 615 (807)
T ss_pred hhhhhcCcccceeEEEEecCc------eEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHH
Confidence 367899999999999998875 89999999988666667999999999999999999999999999999999999
Q ss_pred cccCCcHHHHHhc-----------------------------ccccccCCCCccccccCeEEecCCCcccc---------
Q 007935 426 FIRNGSLYAALHG-----------------------------FGLNRLLPGTSKVTKNETIVTSGTGSRIS--------- 467 (584)
Q Consensus 426 y~~~GsL~~~L~~-----------------------------~g~~~~~~~~~~i~~~~~~~~~~~~~~~~--------- 467 (584)
||++|+|.+||.. |.|+|+.+.|+.+....++++.++|.+..
T Consensus 616 YmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~v 695 (807)
T KOG1094|consen 616 YMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRV 695 (807)
T ss_pred HHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccCCceee
Confidence 9999999988853 46788888888888888888888865431
Q ss_pred ----cCCCcccCccccccCCCCCCccchhhHHHHHHHHHh--CCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhh
Q 007935 468 ----AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT--GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALV 541 (584)
Q Consensus 468 ----~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt--G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~ 541 (584)
+-...|||+|.+.. .++|++||||+|||++||+++ ...||.....+. ..+-.....+.... .....
T Consensus 696 qgr~vlpiRwmawEsill-gkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~--vven~~~~~~~~~~-~~~l~---- 767 (807)
T KOG1094|consen 696 QGRAVLPIRWMAWESILL-GKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQ--VVENAGEFFRDQGR-QVVLS---- 767 (807)
T ss_pred ecceeeeeeehhHHHHHh-ccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHH--HHHhhhhhcCCCCc-ceecc----
Confidence 22467999999887 489999999999999999976 788997544321 22222222222211 11111
Q ss_pred hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 542 KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 542 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.+.-+...+++++++||..|..+||+++++...|++..
T Consensus 768 ---~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~~ 805 (807)
T KOG1094|consen 768 ---RPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQEDA 805 (807)
T ss_pred ---CCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHhc
Confidence 11123456788999999999999999999999888753
|
|
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-31 Score=262.55 Aligned_cols=223 Identities=22% Similarity=0.275 Sum_probs=167.9
Q ss_pred cccchhhHhhhcceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcc--hhhHhHHHHHHHHHhcCCCceeeeeE
Q 007935 335 FSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT--WRFKDFESEVEAIARVQHPNIVRLKA 412 (584)
Q Consensus 335 ~~~~~~~l~~~~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~--~~~~~f~~Ei~~l~~l~HpnIV~l~g 412 (584)
..++.+++.......||+|++|.||+|... + +.||||+++..... ...+.|.+|+.+|++++|||||+++|
T Consensus 13 ~~i~~~~i~~~~~~~i~~g~~~~v~~~~~~-~------~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g 85 (283)
T PHA02988 13 KCIESDDIDKYTSVLIKENDQNSIYKGIFN-N------KEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYG 85 (283)
T ss_pred eecCHHHcCCCCCeEEeeCCceEEEEEEEC-C------EEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEee
Confidence 345677777677789999999999999984 3 79999999765222 22467889999999999999999999
Q ss_pred EEEe----CCceeEeeecccCCcHHHHHhc-------------------------c---cccccCCCCccccccCeEEec
Q 007935 413 FYYA----NDEKLLISDFIRNGSLYAALHG-------------------------F---GLNRLLPGTSKVTKNETIVTS 460 (584)
Q Consensus 413 ~~~~----~~~~~lV~Ey~~~GsL~~~L~~-------------------------~---g~~~~~~~~~~i~~~~~~~~~ 460 (584)
++.+ ....++||||+++|+|.++++. . -|+++.+.|..+..+...+..
T Consensus 86 ~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~ 165 (283)
T PHA02988 86 FIIDIVDDLPRLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKII 165 (283)
T ss_pred eEEecccCCCceEEEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEc
Confidence 9977 3468899999999999777642 1 256677777777777777777
Q ss_pred CCCccc--------ccCCCcccCcccccc-CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC-
Q 007935 461 GTGSRI--------SAISNVYLAPEARIY-GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR- 530 (584)
Q Consensus 461 ~~~~~~--------~~gt~~y~aPE~~~~-~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~- 530 (584)
++|... ..|+..|+|||++.. ...++.++|||||||++|||+||+.||.... ..++.........
T Consensus 166 dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~-----~~~~~~~i~~~~~~ 240 (283)
T PHA02988 166 CHGLEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLT-----TKEIYDLIINKNNS 240 (283)
T ss_pred ccchHhhhccccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHhcCCC
Confidence 776432 357889999998543 1578999999999999999999999997532 2233333222211
Q ss_pred -CCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 531 -PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 531 -~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
+++...+ ..+.+++.+||+.||++|||+.|+++.|++++
T Consensus 241 ~~~~~~~~-------------~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 241 LKLPLDCP-------------LEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred CCCCCcCc-------------HHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 1111122 23456788899999999999999999999876
|
|
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.6e-32 Score=273.65 Aligned_cols=218 Identities=24% Similarity=0.340 Sum_probs=169.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC--CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG--DATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|++...+.... ..||||..+.. .....+++|.+|+++|++++|||||+++|++..+...++||
T Consensus 162 ~kkLGeGaFGeV~~G~l~~~~~~~~-~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivm 240 (474)
T KOG0194|consen 162 GKKLGEGAFGEVFKGKLKLKNGFKV-VPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLVM 240 (474)
T ss_pred cceeecccccEEEEEEEEecCCcee-eeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEEE
Confidence 3789999999999999987653222 22999999852 44556789999999999999999999999999999999999
Q ss_pred ecccCCcHHHHHhcc----------------------------cccccCCCCccccccCeEEecCCCccccc--------
Q 007935 425 DFIRNGSLYAALHGF----------------------------GLNRLLPGTSKVTKNETIVTSGTGSRISA-------- 468 (584)
Q Consensus 425 Ey~~~GsL~~~L~~~----------------------------g~~~~~~~~~~i~~~~~~~~~~~~~~~~~-------- 468 (584)
|+|+||+|.+||..+ -|+|+.++|+++..+..++++|||.+...
T Consensus 241 El~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~~~~ 320 (474)
T KOG0194|consen 241 ELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVMKKF 320 (474)
T ss_pred EecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccccCCcceeeccc
Confidence 999999999888643 36778888888888888889999864321
Q ss_pred ---CCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCCC-ccccChhhhhh
Q 007935 469 ---ISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPL-SEVIDPALVKE 543 (584)
Q Consensus 469 ---gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~d~~~~~~ 543 (584)
-...|+|||.+..+ .|++|+|||||||++||+++ |..||.+.. ..+....+.....+. .....|
T Consensus 321 ~~klPirWLAPEtl~~~-~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~-----~~~v~~kI~~~~~r~~~~~~~p----- 389 (474)
T KOG0194|consen 321 LKKLPIRWLAPETLNTG-IFSFKTDVWSFGVLLWEIFENGAEPYPGMK-----NYEVKAKIVKNGYRMPIPSKTP----- 389 (474)
T ss_pred cccCcceecChhhhccC-ccccccchhheeeeEEeeeccCCCCCCCCC-----HHHHHHHHHhcCccCCCCCCCH-----
Confidence 23579999997775 89999999999999999999 898998532 233333332322211 111122
Q ss_pred hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 544 IHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 544 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
..+..++..||..+|++||||.++.+.|+.+..
T Consensus 390 -------~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~ 422 (474)
T KOG0194|consen 390 -------KELAKVMKQCWKKDPEDRPTMSTIKKKLEALEK 422 (474)
T ss_pred -------HHHHHHHHHhccCChhhccCHHHHHHHHHHHHh
Confidence 233446668999999999999999999998753
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.7e-32 Score=270.13 Aligned_cols=205 Identities=22% Similarity=0.326 Sum_probs=166.0
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeecc
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 427 (584)
..||+|+.|.||.++....+ +.||||++...... ..+-+.+|+.+|+..+|+|||++++.|...++.|+|||||
T Consensus 279 ~kigqgaSG~vy~A~~~~~~-----~~VaiK~m~l~~Q~-~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym 352 (550)
T KOG0578|consen 279 KKIGQGATGGVYVARKISTK-----QEVAIKRMDLRKQP-KKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM 352 (550)
T ss_pred hhhccccccceeeeeeccCC-----ceEEEEEEEeccCC-chhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence 46999999999999987776 78999999875433 3367899999999999999999999999999999999999
Q ss_pred cCCcH------------------------HHHHhccc--ccccCCCCccccccCeEEecCCCcc-----------cccCC
Q 007935 428 RNGSL------------------------YAALHGFG--LNRLLPGTSKVTKNETIVTSGTGSR-----------ISAIS 470 (584)
Q Consensus 428 ~~GsL------------------------~~~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~~gt 470 (584)
++|+| .+|||+.| |+|++.+|+....++.++..+||.. ..+||
T Consensus 353 ~ggsLTDvVt~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~TmVGT 432 (550)
T KOG0578|consen 353 EGGSLTDVVTKTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRSTMVGT 432 (550)
T ss_pred CCCchhhhhhcccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccCccccccCC
Confidence 99999 36677766 5778888888888888888887632 35899
Q ss_pred CcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC--CccccChhhhhhhhHHH
Q 007935 471 NVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP--LSEVIDPALVKEIHAKR 548 (584)
Q Consensus 471 ~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~ 548 (584)
+.|||||+..+ ..|++|+||||+|++++||+-|++||.. +..+..+..-....... .++.+++.+++++
T Consensus 433 PYWMAPEVvtr-k~YG~KVDIWSLGIMaIEMveGEPPYln----E~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL---- 503 (550)
T KOG0578|consen 433 PYWMAPEVVTR-KPYGPKVDIWSLGIMAIEMVEGEPPYLN----ENPLRALYLIATNGTPKLKNPEKLSPELKDFL---- 503 (550)
T ss_pred CCccchhhhhh-cccCccccchhhhhHHHHHhcCCCCccC----CChHHHHHHHhhcCCCCcCCccccCHHHHHHH----
Confidence 99999999555 7899999999999999999999999974 23344333333333222 3556677666544
Q ss_pred HHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 549 QVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 549 ~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+||+.|+++||++.|+++
T Consensus 504 ---------~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 504 ---------DRCLVVDVEQRASAKELLE 522 (550)
T ss_pred ---------HHHhhcchhcCCCHHHHhc
Confidence 4499999999999999985
|
|
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-32 Score=263.92 Aligned_cols=205 Identities=20% Similarity=0.337 Sum_probs=163.6
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeecc
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 427 (584)
..||+|+||.||||.....+ +.||+|.+........++++.+|+.+++.++|+||.++||.+..+...+++||||
T Consensus 19 ~~IgrGsfG~Vyk~~d~~t~-----k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~ 93 (467)
T KOG0201|consen 19 ELIGRGSFGEVYKAIDNKTK-----KVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYC 93 (467)
T ss_pred hhccccccceeeeeeecccc-----ceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHh
Confidence 57999999999999998887 8999999998877777789999999999999999999999999999999999999
Q ss_pred cCCcHHHHH-------------------------hc--ccccccCCCCccccccCeEEecCCCcc-----------cccC
Q 007935 428 RNGSLYAAL-------------------------HG--FGLNRLLPGTSKVTKNETIVTSGTGSR-----------ISAI 469 (584)
Q Consensus 428 ~~GsL~~~L-------------------------~~--~g~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~~g 469 (584)
.+|++.+.| |. ..|+++++.|+.+..++.++..+||.. ..+|
T Consensus 94 ~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~tfvG 173 (467)
T KOG0201|consen 94 GGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKTFVG 173 (467)
T ss_pred cCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechhhccccccc
Confidence 999985443 33 357888888988888877777777632 3589
Q ss_pred CCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhc-CCCCccccChhhhhhhhHHH
Q 007935 470 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE-RRPLSEVIDPALVKEIHAKR 548 (584)
Q Consensus 470 t~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~ 548 (584)
|+.|||||++. +..|+.|+||||+|++.+||.+|.+|+...+... .+ -..... .+.+...+++.
T Consensus 174 TPfwMAPEVI~-~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmr-vl----flIpk~~PP~L~~~~S~~--------- 238 (467)
T KOG0201|consen 174 TPFWMAPEVIK-QSGYDTKADIWSLGITAIELAKGEPPHSKLHPMR-VL----FLIPKSAPPRLDGDFSPP--------- 238 (467)
T ss_pred cccccchhhhc-cccccchhhhhhhhHHHHHHhcCCCCCcccCcce-EE----EeccCCCCCccccccCHH---------
Confidence 99999999965 5789999999999999999999999998644311 00 001111 11122223333
Q ss_pred HHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 549 QVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 549 ~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+.+++..|+++||+.||++.++++
T Consensus 239 ----~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 239 ----FKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred ----HHHHHHHHhhcCcccCcCHHHHhh
Confidence 344666699999999999999985
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-31 Score=268.58 Aligned_cols=222 Identities=23% Similarity=0.316 Sum_probs=170.4
Q ss_pred cchhhHhhhcceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC-CcchhhHhHHHHHHHHHhcCCCceeeeeEEEE
Q 007935 337 LELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARVQHPNIVRLKAFYY 415 (584)
Q Consensus 337 ~~~~~l~~~~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~ 415 (584)
+..+++. ....||+|.||+||+|++.+ .||||.++.. ..++..+.|.+|+.++++-||.||+=++|||.
T Consensus 389 Ip~~ev~--l~~rIGsGsFGtV~Rg~whG--------dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~ 458 (678)
T KOG0193|consen 389 IPPEEVL--LGERIGSGSFGTVYRGRWHG--------DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACM 458 (678)
T ss_pred cCHHHhh--ccceeccccccceeeccccc--------ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhc
Confidence 4445544 45789999999999999976 4999999876 34446789999999999999999999999998
Q ss_pred eCCceeEeeecccCCcHHHHHhc----------------------------ccccccCCCCccccccCeEEecCCCccc-
Q 007935 416 ANDEKLLISDFIRNGSLYAALHG----------------------------FGLNRLLPGTSKVTKNETIVTSGTGSRI- 466 (584)
Q Consensus 416 ~~~~~~lV~Ey~~~GsL~~~L~~----------------------------~g~~~~~~~~~~i~~~~~~~~~~~~~~~- 466 (584)
.++. .+|..+|+|-+|+.|||. ..|+|++..|+.+..+..+++.|||...
T Consensus 459 ~p~~-AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatv 537 (678)
T KOG0193|consen 459 NPPL-AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATV 537 (678)
T ss_pred CCce-eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceee
Confidence 8877 999999999999988873 1467777788888888889998887432
Q ss_pred ------------ccCCCcccCccccccC--CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCC
Q 007935 467 ------------SAISNVYLAPEARIYG--SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPL 532 (584)
Q Consensus 467 ------------~~gt~~y~aPE~~~~~--~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 532 (584)
..|...|||||++... ..|+..+||||||+|+|||+||..||.....+. .+ | .....
T Consensus 538 k~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dq-Ii--f---mVGrG--- 608 (678)
T KOG0193|consen 538 KTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQ-II--F---MVGRG--- 608 (678)
T ss_pred eeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhh-eE--E---Eeccc---
Confidence 2567779999986543 468999999999999999999999998322221 11 1 01111
Q ss_pred ccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 533 SEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 533 ~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
...++... ....+..++.+|+..||..++++||.+.+|+..|+.+.
T Consensus 609 --~l~pd~s~--~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~ 654 (678)
T KOG0193|consen 609 --YLMPDLSK--IRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELL 654 (678)
T ss_pred --ccCccchh--hhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhh
Confidence 11111111 11245567788999999999999999999999887763
|
|
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.9e-30 Score=262.25 Aligned_cols=219 Identities=23% Similarity=0.318 Sum_probs=160.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCC-ceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYAND-EKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~-~~~lV~ 424 (584)
.+.||+|+||.||+|.............||||+++........+.+.+|+.++.++ +|||||+++++|...+ ..++||
T Consensus 12 ~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ 91 (338)
T cd05102 12 GKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPLMVIV 91 (338)
T ss_pred eeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCceEEEE
Confidence 56799999999999986432222233689999998654444457799999999999 8999999999987654 588999
Q ss_pred ecccCCcHHHHHh-------------------------------------------------------------------
Q 007935 425 DFIRNGSLYAALH------------------------------------------------------------------- 437 (584)
Q Consensus 425 Ey~~~GsL~~~L~------------------------------------------------------------------- 437 (584)
||+++|+|.++++
T Consensus 92 ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 171 (338)
T cd05102 92 EFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPL 171 (338)
T ss_pred ecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccccccCCC
Confidence 9999999976664
Q ss_pred --------------------cc--cccccCCCCccccccCeEEecCCCccc-------------ccCCCcccCccccccC
Q 007935 438 --------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI-------------SAISNVYLAPEARIYG 482 (584)
Q Consensus 438 --------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~-------------~~gt~~y~aPE~~~~~ 482 (584)
+. -|+++++.|+.+..+..++..++|... ..++..|||||++..
T Consensus 172 ~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~- 250 (338)
T cd05102 172 TMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFD- 250 (338)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcHHhhc-
Confidence 22 256777788777767777777776432 124567999998654
Q ss_pred CCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC-CCCccccChhhhhhhhHHHHHHHHHHHHhcc
Q 007935 483 SKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER-RPLSEVIDPALVKEIHAKRQVLATFHIALNC 560 (584)
Q Consensus 483 ~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~C 560 (584)
..++.++|||||||++|||++ |+.||.+.... ..+........ ...+...+ ..+.+++.+|
T Consensus 251 ~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~-------------~~l~~li~~c 313 (338)
T cd05102 251 KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIN----EEFCQRLKDGTRMRAPENAT-------------PEIYRIMLAC 313 (338)
T ss_pred CCCCcccCHHHHHHHHHHHHhCCCCCCCCCCcc----HHHHHHHhcCCCCCCCCCCC-------------HHHHHHHHHH
Confidence 679999999999999999997 99999753321 11111111111 11112222 2455688889
Q ss_pred cCCCCCCCCChHHHHHHHHhhhc
Q 007935 561 TELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 561 l~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
|+.||++|||+.|++++|+++..
T Consensus 314 l~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 314 WQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred ccCChhhCcCHHHHHHHHHHHHh
Confidence 99999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.2e-31 Score=260.62 Aligned_cols=204 Identities=19% Similarity=0.308 Sum_probs=168.6
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCC-CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
+.||+|+||.||||+.+.+. +.||+|.+.+. ...++.+...+|++|+++++|||||.++++|++..+.++|.||
T Consensus 8 e~iG~Gsfg~VYKgrrK~t~-----~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~ 82 (808)
T KOG0597|consen 8 EMIGEGSFGRVYKGRRKYTI-----QVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEY 82 (808)
T ss_pred HHhcCCccceeeecccccce-----eEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehh
Confidence 35999999999999988876 89999999776 4444567899999999999999999999999999999999999
Q ss_pred ccCCcHHHHH-------------------------hcc--cccccCCCCccccccCeEEecCCCcc-----------ccc
Q 007935 427 IRNGSLYAAL-------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSR-----------ISA 468 (584)
Q Consensus 427 ~~~GsL~~~L-------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~~ 468 (584)
+.+ +|+.+| |+. -|+++++.|+.+...+.++..+||.. ...
T Consensus 83 a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vltsik 161 (808)
T KOG0597|consen 83 AVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLTSIK 161 (808)
T ss_pred hhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccCceeeeecc
Confidence 987 986555 333 35788888888888888888777632 247
Q ss_pred CCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHH
Q 007935 469 ISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKR 548 (584)
Q Consensus 469 gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 548 (584)
||+.|||||+.. ++.|+..+|.||+||++||+.+|++||. ...+.++++.+..+....+...+..+..++
T Consensus 162 GtPlYmAPElv~-e~pyd~~sDlWslGcilYE~~~G~PPF~-----a~si~~Lv~~I~~d~v~~p~~~S~~f~nfl---- 231 (808)
T KOG0597|consen 162 GTPLYMAPELVE-EQPYDHTSDLWSLGCILYELYVGQPPFY-----ARSITQLVKSILKDPVKPPSTASSSFVNFL---- 231 (808)
T ss_pred CcccccCHHHHc-CCCccchhhHHHHHHHHHHHhcCCCCch-----HHHHHHHHHHHhcCCCCCcccccHHHHHHH----
Confidence 999999999854 6899999999999999999999999997 345777888887776665665665555444
Q ss_pred HHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 549 QVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 549 ~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
...+.+||.+|.|-.+++.
T Consensus 232 ---------~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 232 ---------QGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred ---------HHHhhcChhhcccHHHHhc
Confidence 4489999999999888764
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=253.16 Aligned_cols=209 Identities=21% Similarity=0.313 Sum_probs=158.5
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCC--ceeEe
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAND--EKLLI 423 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~--~~~lV 423 (584)
..+.||+|+||.||++...+.+ ...|||.+....... .+.+.+|+.+|++++|||||+++|...... ..++.
T Consensus 21 ~~~~lG~Gs~G~V~l~~~~~~g-----~~~AvK~v~~~~~~~-~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~ 94 (313)
T KOG0198|consen 21 KGKLLGRGSFGSVYLATNKKTG-----ELMAVKSVELEDSPT-SESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIF 94 (313)
T ss_pred hhccccCccceEEEEEEecCCC-----cceeeeeeecccchh-HHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEee
Confidence 4578999999999999998854 789999998753332 477899999999999999999999865555 58999
Q ss_pred eecccCCcHHHHH--------------------------hc--ccccccCCCCccccc-cCeEEecCCCcc---------
Q 007935 424 SDFIRNGSLYAAL--------------------------HG--FGLNRLLPGTSKVTK-NETIVTSGTGSR--------- 465 (584)
Q Consensus 424 ~Ey~~~GsL~~~L--------------------------~~--~g~~~~~~~~~~i~~-~~~~~~~~~~~~--------- 465 (584)
|||+++|+|.+++ |+ +-|+++++.|+.+.. +..++..|||..
T Consensus 95 mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~ 174 (313)
T KOG0198|consen 95 MEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTK 174 (313)
T ss_pred eeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCcccccccccccc
Confidence 9999999996554 42 346888888888877 578888888722
Q ss_pred -----cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcC--CCCccccCh
Q 007935 466 -----ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER--RPLSEVIDP 538 (584)
Q Consensus 466 -----~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~d~ 538 (584)
...||+.|||||++..+.....++||||+||++.||+||++||... .....+.-...... +.+++.+++
T Consensus 175 ~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~----~~~~~~~~~ig~~~~~P~ip~~ls~ 250 (313)
T KOG0198|consen 175 SDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF----FEEAEALLLIGREDSLPEIPDSLSD 250 (313)
T ss_pred ccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh----cchHHHHHHHhccCCCCCCCcccCH
Confidence 2468999999999765433345999999999999999999999752 11222222222222 234555555
Q ss_pred hhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHH
Q 007935 539 ALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSES 577 (584)
Q Consensus 539 ~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 577 (584)
...+ ++.+|++.||++|||+.++++.
T Consensus 251 ~a~~-------------Fl~~C~~~~p~~Rpta~eLL~h 276 (313)
T KOG0198|consen 251 EAKD-------------FLRKCFKRDPEKRPTAEELLEH 276 (313)
T ss_pred HHHH-------------HHHHHhhcCcccCcCHHHHhhC
Confidence 5544 5555999999999999999864
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-30 Score=260.52 Aligned_cols=206 Identities=20% Similarity=0.314 Sum_probs=177.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC--CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG--DATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
++.||.|+-|.|..|++..+| +.+|||.+.+. ..+.....+.+||-+|+-+.||||+++++++++..+.|+|.
T Consensus 17 gkTLG~Gstg~vrlakh~~TG-----qlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 17 GKTLGKGSTGCVRLAKHAETG-----QLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred cccccCCCCceehhhhccccc-----ceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 456999999999999999887 89999999765 22223467889999999999999999999999999999999
Q ss_pred ecccCCcHHHHHhc---------------------------ccccccCCCCccccccCeEEecCCCcc----------cc
Q 007935 425 DFIRNGSLYAALHG---------------------------FGLNRLLPGTSKVTKNETIVTSGTGSR----------IS 467 (584)
Q Consensus 425 Ey~~~GsL~~~L~~---------------------------~g~~~~~~~~~~i~~~~~~~~~~~~~~----------~~ 467 (584)
||+++|.|++||-. +.|+|++++|..++..+.+++.+||.. ..
T Consensus 92 Eyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gklLeTS 171 (786)
T KOG0588|consen 92 EYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKLLETS 171 (786)
T ss_pred EecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccCCcccccc
Confidence 99999999988743 247889999988888888999998853 35
Q ss_pred cCCCcccCccccccCCCC-CCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhH
Q 007935 468 AISNVYLAPEARIYGSKF-TQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 546 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~-~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 546 (584)
+|++.|.|||++.. ..| +.++||||.|||||.|+||+.||+ ++++..+..++.++...++..++++.++++..
T Consensus 172 CGSPHYA~PEIV~G-~pYdG~~sDVWSCGVILfALLtG~LPFd-----DdNir~LLlKV~~G~f~MPs~Is~eaQdLLr~ 245 (786)
T KOG0588|consen 172 CGSPHYAAPEIVSG-RPYDGRPSDVWSCGVILFALLTGKLPFD-----DDNIRVLLLKVQRGVFEMPSNISSEAQDLLRR 245 (786)
T ss_pred CCCcccCCchhhcC-CCCCCCccccchhHHHHHHHHhCCCCCC-----CccHHHHHHHHHcCcccCCCcCCHHHHHHHHH
Confidence 89999999999554 555 689999999999999999999998 46788888898888888888888888765554
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 547 KRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 547 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
++..||.+|.|++||++
T Consensus 246 -------------ml~VDp~~RiT~~eI~k 262 (786)
T KOG0588|consen 246 -------------MLDVDPSTRITTEEILK 262 (786)
T ss_pred -------------HhccCccccccHHHHhh
Confidence 99999999999999986
|
|
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-31 Score=272.45 Aligned_cols=223 Identities=21% Similarity=0.320 Sum_probs=173.3
Q ss_pred hhHhhhcceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCc
Q 007935 340 EDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDE 419 (584)
Q Consensus 340 ~~l~~~~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~ 419 (584)
+|......++||+|+||+||||.+... +.....+||+|.+......+..++|++|+-+|++++|||+++|+|+|....
T Consensus 694 kEtelkk~kvLGsgAfGtV~kGiw~Pe-ge~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~- 771 (1177)
T KOG1025|consen 694 KETELKKDKVLGSGAFGTVYKGIWIPE-GENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST- 771 (1177)
T ss_pred hhhhhhhhceeccccceeEEeeeEecC-CceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-
Confidence 444445678999999999999988765 334447899999988766656689999999999999999999999998765
Q ss_pred eeEeeecccCCcHHHHHhcc----------------------------cccccCCCCccccccCeEEecCCCccc-----
Q 007935 420 KLLISDFIRNGSLYAALHGF----------------------------GLNRLLPGTSKVTKNETIVTSGTGSRI----- 466 (584)
Q Consensus 420 ~~lV~Ey~~~GsL~~~L~~~----------------------------g~~~~~~~~~~i~~~~~~~~~~~~~~~----- 466 (584)
..||++||+.|+|.+|++.. .|+++..+|+.+.....++..+||...
T Consensus 772 ~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d 851 (1177)
T KOG1025|consen 772 LQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPD 851 (1177)
T ss_pred HHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCcc
Confidence 89999999999999988631 467888888888877888887776432
Q ss_pred --------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccC
Q 007935 467 --------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVID 537 (584)
Q Consensus 467 --------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d 537 (584)
..-.+.|||-|.+.. ..|+.++|||||||++||++| |..||++...+ .+.+.++..-+..+
T Consensus 852 ~~ey~~~~gK~pikwmale~i~~-~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~--eI~dlle~geRLsq------- 921 (1177)
T KOG1025|consen 852 EKEYSAPGGKVPIKWMALESIRI-RKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAE--EIPDLLEKGERLSQ------- 921 (1177)
T ss_pred cccccccccccCcHHHHHHHhhc-cCCCchhhhhhhhhhHHHHHhcCCCccCCCCHH--HhhHHHhccccCCC-------
Confidence 122445888888554 789999999999999999999 99999864432 23333333222111
Q ss_pred hhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 538 PALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
+.-+..+++.++.+||..|++.||+++++...+.++.
T Consensus 922 --------PpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~a 958 (1177)
T KOG1025|consen 922 --------PPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMA 958 (1177)
T ss_pred --------CCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHh
Confidence 1224456788999999999999999999999888764
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-30 Score=239.22 Aligned_cols=221 Identities=19% Similarity=0.269 Sum_probs=164.2
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcch-hhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATW-RFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~-~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
..+|+|+||+|||++.++++ +.||||++....++. ..+-.+|||++|++++|+|+|.|+++|......+||+||
T Consensus 8 gkvGEGSYGvV~KCrnk~Tg-----qIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~ 82 (396)
T KOG0593|consen 8 GKVGEGSYGVVMKCRNKDTG-----QIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEY 82 (396)
T ss_pred hccccCcceEEEEeccCCcc-----cEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeee
Confidence 36899999999999999988 999999998875533 345578999999999999999999999999999999999
Q ss_pred ccCCcHH-------------------------HHHh--cccccccCCCCccccccCeEEecCCCccc-----------cc
Q 007935 427 IRNGSLY-------------------------AALH--GFGLNRLLPGTSKVTKNETIVTSGTGSRI-----------SA 468 (584)
Q Consensus 427 ~~~GsL~-------------------------~~L~--~~g~~~~~~~~~~i~~~~~~~~~~~~~~~-----------~~ 468 (584)
|+.--|. .|+| +..|+|++++|+.|...+.++..|||... .+
T Consensus 83 ~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTDYV 162 (396)
T KOG0593|consen 83 CDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTDYV 162 (396)
T ss_pred cchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCCcchhhhhh
Confidence 9874432 1122 23589999999999999999998887432 35
Q ss_pred CCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHh-----------hcCCC-----C
Q 007935 469 ISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF-----------RERRP-----L 532 (584)
Q Consensus 469 gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~-----------~~~~~-----~ 532 (584)
.|.+|.|||.+....+|+..+||||.||++.||+||.+-|.+...-+ .+. .++..+ ...+- +
T Consensus 163 ATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiD-QLy-~I~ktLG~L~prhq~iF~~N~~F~Gv~l 240 (396)
T KOG0593|consen 163 ATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDID-QLY-LIRKTLGNLIPRHQSIFSSNPFFHGVRL 240 (396)
T ss_pred hhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHH-HHH-HHHHHHcccCHHHHHHhccCCceeeeec
Confidence 68899999998877899999999999999999999998887643211 111 111111 11111 1
Q ss_pred ccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 533 SEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 533 ~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
++.-+++-...-. ..-..-+++++..|++.||++|++.+|++.
T Consensus 241 P~~~~~epLe~k~-p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 241 PEPEHPEPLERKY-PKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred CCCCCccchhhhc-ccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 1111111100000 012236789999999999999999999873
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=255.92 Aligned_cols=206 Identities=20% Similarity=0.281 Sum_probs=167.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC----CcchhhHhHHHHHHHHHhcC-CCceeeeeEEEEeCCcee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG----DATWRFKDFESEVEAIARVQ-HPNIVRLKAFYYANDEKL 421 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~----~~~~~~~~f~~Ei~~l~~l~-HpnIV~l~g~~~~~~~~~ 421 (584)
.+.||+|+||+||.|.....+ ..||||.+.+. ......+.+.+|+.++++++ ||||++++.++......+
T Consensus 22 ~~~lG~GsfgkV~~a~~~~t~-----~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~ 96 (370)
T KOG0583|consen 22 GRTLGSGSFGKVKLAKHRLTG-----EKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKIY 96 (370)
T ss_pred eeeecCCCCeeEEEeeeccCC-----CeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeEE
Confidence 467999999999999988776 89999977664 11123356778999999998 999999999999999999
Q ss_pred EeeecccCCcHHHHHhc-------------------------c--cccccCCCCcccccc-CeEEecCCCcc--------
Q 007935 422 LISDFIRNGSLYAALHG-------------------------F--GLNRLLPGTSKVTKN-ETIVTSGTGSR-------- 465 (584)
Q Consensus 422 lV~Ey~~~GsL~~~L~~-------------------------~--g~~~~~~~~~~i~~~-~~~~~~~~~~~-------- 465 (584)
+||||+.+|+|++++.+ . -|+|++++|..+..+ ..++..|||.+
T Consensus 97 ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~~~ 176 (370)
T KOG0583|consen 97 IVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISPGEDG 176 (370)
T ss_pred EEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccCCCCC
Confidence 99999999999877643 3 368899999888887 88888777633
Q ss_pred ---cccCCCcccCccccccCCCC-CCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCcccc-Chhh
Q 007935 466 ---ISAISNVYLAPEARIYGSKF-TQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVI-DPAL 540 (584)
Q Consensus 466 ---~~~gt~~y~aPE~~~~~~~~-~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-d~~~ 540 (584)
..+||+.|+|||++.....| ..++||||+||+||.|++|+.||++ .....+.+........++..+ ++++
T Consensus 177 ~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d-----~~~~~l~~ki~~~~~~~p~~~~S~~~ 251 (370)
T KOG0583|consen 177 LLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDD-----SNVPNLYRKIRKGEFKIPSYLLSPEA 251 (370)
T ss_pred cccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCC-----ccHHHHHHHHhcCCccCCCCcCCHHH
Confidence 24799999999996653316 4899999999999999999999985 345566666667766777777 6666
Q ss_pred hhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHH
Q 007935 541 VKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVS 575 (584)
Q Consensus 541 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~ 575 (584)
.. ++.+|+..||.+|+|+.||+
T Consensus 252 ~~-------------Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 252 RS-------------LIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred HH-------------HHHHHcCCCcccCCCHHHHh
Confidence 54 55559999999999999998
|
|
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-30 Score=257.90 Aligned_cols=225 Identities=24% Similarity=0.342 Sum_probs=177.3
Q ss_pred chhhHhhhcceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC
Q 007935 338 ELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN 417 (584)
Q Consensus 338 ~~~~l~~~~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~ 417 (584)
.+..-.....++||+|-||.||+|.+.+.. .+....||||..+.....+..+.|++|..+|++++|||||+|+|+|.+
T Consensus 385 el~Re~Itl~r~iG~GqFGdVy~gvYt~~~-kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e- 462 (974)
T KOG4257|consen 385 ELRRELITLKRLIGEGQFGDVYKGVYTDPE-KGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE- 462 (974)
T ss_pred eeehhhccHHHhhcCCcccceeeeEecccc-cCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-
Confidence 333333345688999999999999987653 233368999999987666667899999999999999999999999966
Q ss_pred CceeEeeecccCCcHHHHHhc----------------------------ccccccCCCCccccccCeEEecCCCcccc--
Q 007935 418 DEKLLISDFIRNGSLYAALHG----------------------------FGLNRLLPGTSKVTKNETIVTSGTGSRIS-- 467 (584)
Q Consensus 418 ~~~~lV~Ey~~~GsL~~~L~~----------------------------~g~~~~~~~~~~i~~~~~~~~~~~~~~~~-- 467 (584)
...++|||+++-|.|.+||.. |.|+|+..+|+.+.....++..|||.+..
T Consensus 463 ~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~e 542 (974)
T KOG4257|consen 463 QPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLE 542 (974)
T ss_pred cceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhcc
Confidence 578999999999999988853 57899999999998888888888885432
Q ss_pred ----------cCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCCCcccc
Q 007935 468 ----------AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVI 536 (584)
Q Consensus 468 ----------~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 536 (584)
.-...|||||.+.. .++|++||||-|||.+||++. |..||.+-.+.+... .+ .-.++.+.++..
T Consensus 543 d~~yYkaS~~kLPIKWmaPESINf-RrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~--~i--EnGeRlP~P~nC 617 (974)
T KOG4257|consen 543 DDAYYKASRGKLPIKWMAPESINF-RRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIG--HI--ENGERLPCPPNC 617 (974)
T ss_pred ccchhhccccccceeecCccccch-hcccchhhHHHHHHHHHHHHHhcCCccccccccceEE--Ee--cCCCCCCCCCCC
Confidence 22445999999554 799999999999999999987 999999755443211 01 112344455555
Q ss_pred ChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 537 DPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 537 d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.|.+ +.++.+||+.||.+||++.|+...|..+.
T Consensus 618 Pp~L-------------YslmskcWayeP~kRPrftei~~~lsdv~ 650 (974)
T KOG4257|consen 618 PPAL-------------YSLMSKCWAYEPSKRPRFTEIKAILSDVL 650 (974)
T ss_pred ChHH-------------HHHHHHHhccCcccCCcHHHHHHHHHHHH
Confidence 5554 44777899999999999999999988774
|
|
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-30 Score=263.81 Aligned_cols=212 Identities=21% Similarity=0.316 Sum_probs=166.4
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.++||+|.||+|++|.|...++ ....||||.++.........+|++|+.+|-+|+|||+|+|||+..+ ....+|+|+
T Consensus 115 ~e~LG~GsFgvV~rg~Wt~psg--k~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~EL 191 (1039)
T KOG0199|consen 115 YELLGEGSFGVVKRGTWTQPSG--KHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFEL 191 (1039)
T ss_pred HHHhcCcceeeEeeccccCCCC--cEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhh
Confidence 4679999999999999987543 3378999999987555466899999999999999999999999988 788999999
Q ss_pred ccCCcHHHHHhc-----------------------------ccccccCCCCccccccCeEEecCCCcccc----------
Q 007935 427 IRNGSLYAALHG-----------------------------FGLNRLLPGTSKVTKNETIVTSGTGSRIS---------- 467 (584)
Q Consensus 427 ~~~GsL~~~L~~-----------------------------~g~~~~~~~~~~i~~~~~~~~~~~~~~~~---------- 467 (584)
++.|+|.+.||+ +.|+|+...|..+.....+++.|||....
T Consensus 192 aplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm 271 (1039)
T KOG0199|consen 192 APLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVM 271 (1039)
T ss_pred cccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCCCcceEe
Confidence 999999988875 24677777887777777788888875432
Q ss_pred ----cCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhh
Q 007935 468 ----AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVK 542 (584)
Q Consensus 468 ----~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~ 542 (584)
.-...|.|||.+.. ..++.+||||+|||++|||+| |+.||.+... .++.+..- .+..
T Consensus 272 ~p~rkvPfAWCaPEsLrh-~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g-----~qIL~~iD-~~er----------- 333 (1039)
T KOG0199|consen 272 APQRKVPFAWCAPESLRH-RKFSHASDVWMYGVTIWEMFTYGEEPWVGCRG-----IQILKNID-AGER----------- 333 (1039)
T ss_pred cCCCcCcccccCHhHhcc-ccccccchhhhhhhhHHhhhccCCCCCCCCCH-----HHHHHhcc-cccc-----------
Confidence 12345999999665 689999999999999999999 8899975322 22222221 1111
Q ss_pred hhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHH
Q 007935 543 EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579 (584)
Q Consensus 543 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~ 579 (584)
+-....|.++++++|+.||..+|++|||+..|.+.+-
T Consensus 334 LpRPk~csedIY~imk~cWah~paDRptFsair~~~~ 370 (1039)
T KOG0199|consen 334 LPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLV 370 (1039)
T ss_pred CCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHH
Confidence 1123456678899999999999999999999985543
|
|
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-29 Score=260.28 Aligned_cols=219 Identities=21% Similarity=0.297 Sum_probs=158.3
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
..+.||+|+||.||+|+............||||+++........+.+.+|+++++.+ +|||||+++++|.+.+..++||
T Consensus 39 ~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~lv~ 118 (375)
T cd05104 39 FGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTLVIT 118 (375)
T ss_pred hhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcceeee
Confidence 357899999999999986432222223789999997654444457899999999999 8999999999999999999999
Q ss_pred ecccCCcHHHHHhc------------------------------------------------------------------
Q 007935 425 DFIRNGSLYAALHG------------------------------------------------------------------ 438 (584)
Q Consensus 425 Ey~~~GsL~~~L~~------------------------------------------------------------------ 438 (584)
||+++|+|.++++.
T Consensus 119 E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (375)
T cd05104 119 EYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQD 198 (375)
T ss_pred hhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccceecccc
Confidence 99999999877742
Q ss_pred ----------------------------------cc--ccccCCCCccccccCeEEecCCCccc-------------ccC
Q 007935 439 ----------------------------------FG--LNRLLPGTSKVTKNETIVTSGTGSRI-------------SAI 469 (584)
Q Consensus 439 ----------------------------------~g--~~~~~~~~~~i~~~~~~~~~~~~~~~-------------~~g 469 (584)
.| |+++++.|+.+..+...+..++|... ..+
T Consensus 199 ~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~ 278 (375)
T cd05104 199 VTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARL 278 (375)
T ss_pred cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCcccccccCCCCC
Confidence 12 45666666666655556666666321 123
Q ss_pred CCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHH
Q 007935 470 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKR 548 (584)
Q Consensus 470 t~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 548 (584)
+..|+|||++.. ..++.++|||||||++|||+| |..||.....+. .....+....+ ...+...+
T Consensus 279 ~~~y~aPE~~~~-~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~-~~~~~~~~~~~--~~~~~~~~----------- 343 (375)
T cd05104 279 PVKWMAPESIFN-CVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS-KFYKMIKEGYR--MLSPECAP----------- 343 (375)
T ss_pred CcceeChhHhcC-CCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH-HHHHHHHhCcc--CCCCCCCC-----------
Confidence 456999999554 689999999999999999998 888987533221 12222221111 11111111
Q ss_pred HHHHHHHHHhcccCCCCCCCCChHHHHHHHHhh
Q 007935 549 QVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581 (584)
Q Consensus 549 ~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 581 (584)
.++.+++.+||+.||++||||.||+++|++.
T Consensus 344 --~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 344 --SEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred --HHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 2455688889999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.7e-30 Score=248.01 Aligned_cols=219 Identities=21% Similarity=0.278 Sum_probs=162.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHh--cCCCceeeeeEEEEeCC----ce
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIAR--VQHPNIVRLKAFYYAND----EK 420 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~--l~HpnIV~l~g~~~~~~----~~ 420 (584)
..+||+|.||.||||.+.+ +.||||++... ..+.|.+|-.|.+- ++|+||++++++-.... ++
T Consensus 215 ~eli~~Grfg~V~KaqL~~-------~~VAVKifp~~----~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~ey 283 (534)
T KOG3653|consen 215 LELIGRGRFGCVWKAQLDN-------RLVAVKIFPEQ----EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEY 283 (534)
T ss_pred HHHhhcCccceeehhhccC-------ceeEEEecCHH----HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccce
Confidence 3569999999999999977 69999999753 23678888888665 58999999999876655 79
Q ss_pred eEeeecccCCcHHHHHhcc-----------------------------------cccccCCCCccccccCeEEecCCCcc
Q 007935 421 LLISDFIRNGSLYAALHGF-----------------------------------GLNRLLPGTSKVTKNETIVTSGTGSR 465 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~~L~~~-----------------------------------g~~~~~~~~~~i~~~~~~~~~~~~~~ 465 (584)
+||+||.++|+|.+||... .|+|++..|+.+..|....+.|||..
T Consensus 284 wLVt~fh~kGsL~dyL~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLA 363 (534)
T KOG3653|consen 284 WLVTEFHPKGSLCDYLKANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLA 363 (534)
T ss_pred eEEeeeccCCcHHHHHHhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecccee
Confidence 9999999999999998642 36777888888888888888887743
Q ss_pred -------------cccCCCcccCccccccCCCCC-----CccchhhHHHHHHHHHhCCCC------------CCCCCCCC
Q 007935 466 -------------ISAISNVYLAPEARIYGSKFT-----QKCDVYSFGIVLLEILTGRLP------------DAGPENDG 515 (584)
Q Consensus 466 -------------~~~gt~~y~aPE~~~~~~~~~-----~ksDV~SfGvvl~ElltG~~p------------~~~~~~~~ 515 (584)
..+||.+|||||++...-.+. .+.||||+|.|||||+++-.- |+..-...
T Consensus 364 l~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~h 443 (534)
T KOG3653|consen 364 LRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNH 443 (534)
T ss_pred EEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCC
Confidence 247999999999965432233 368999999999999986433 22222223
Q ss_pred CcHHHHHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 516 KGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 516 ~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
..+.++...+.+.+.. |.+.+.......+..+.+.+..||..||+.|.|+.-|.+++.++.
T Consensus 444 Pt~e~mq~~VV~kK~R------P~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~ 504 (534)
T KOG3653|consen 444 PTLEEMQELVVRKKQR------PKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELM 504 (534)
T ss_pred CCHHHHHHHHHhhccC------CCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHh
Confidence 3445554444444432 222222333356677788899999999999999999988877663
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.3e-30 Score=252.51 Aligned_cols=207 Identities=18% Similarity=0.218 Sum_probs=171.2
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC--CcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeE
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG--DATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLL 422 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~l 422 (584)
++++||+|+|++||+|+....+ +.+|||++.+. ..+...+-..+|-.+|.+| .||.||+|+-.|+++...|+
T Consensus 77 Fg~~lGeGSYStV~~A~~~~t~-----keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYF 151 (604)
T KOG0592|consen 77 FGKILGEGSYSTVVLAREKATG-----KEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYF 151 (604)
T ss_pred hhheeccccceeEEEeeecCCC-----ceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEE
Confidence 5678999999999999998876 89999999876 2233346678899999999 89999999999999999999
Q ss_pred eeecccCCcHHHHHh-------------------------ccc--ccccCCCCccccccCeEEecCCCcc----------
Q 007935 423 ISDFIRNGSLYAALH-------------------------GFG--LNRLLPGTSKVTKNETIVTSGTGSR---------- 465 (584)
Q Consensus 423 V~Ey~~~GsL~~~L~-------------------------~~g--~~~~~~~~~~i~~~~~~~~~~~~~~---------- 465 (584)
|+||++||+|.++|+ +.| |+|++++|+++..|+.+++.|||+.
T Consensus 152 vLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~ 231 (604)
T KOG0592|consen 152 VLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQ 231 (604)
T ss_pred EEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhhccc
Confidence 999999999966654 444 7999999999999999999888732
Q ss_pred --------------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC
Q 007935 466 --------------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP 531 (584)
Q Consensus 466 --------------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~ 531 (584)
..+||..|.+||++.. ...+..+|+|+|||+||.|+.|++||.+. +-...++++..-...
T Consensus 232 ~~~~~~~~a~s~~~SFVGTAeYVSPElL~~-~~~~~~sDiWAlGCilyQmlaG~PPFra~-----NeyliFqkI~~l~y~ 305 (604)
T KOG0592|consen 232 ENPVDPNQASSRRSSFVGTAEYVSPELLND-SPAGPSSDLWALGCILYQMLAGQPPFRAA-----NEYLIFQKIQALDYE 305 (604)
T ss_pred cCccCcccccCcccceeeeecccCHHHhcC-CCCCcccchHHHHHHHHHHhcCCCCCccc-----cHHHHHHHHHHhccc
Confidence 2479999999999655 68899999999999999999999999852 233455666666667
Q ss_pred CccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 532 ~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+++.+++.+.+ |+.+.|..||.+|+|..||-+
T Consensus 306 fp~~fp~~a~d-------------Lv~KLLv~dp~~Rlt~~qIk~ 337 (604)
T KOG0592|consen 306 FPEGFPEDARD-------------LIKKLLVRDPSDRLTSQQIKA 337 (604)
T ss_pred CCCCCCHHHHH-------------HHHHHHccCccccccHHHHhh
Confidence 77777776655 444589999999999988754
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-30 Score=252.34 Aligned_cols=221 Identities=19% Similarity=0.286 Sum_probs=166.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcC-CCceeeeeEEEEeCC-ceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-HPNIVRLKAFYYAND-EKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~-HpnIV~l~g~~~~~~-~~~lV~ 424 (584)
.+.||.|.||.||+|+....+ ..||||++++.-...+.-.=+||++.|++++ |||||++.+++.+.+ ..|+||
T Consensus 15 i~klGDGTfGsV~la~~~~~~-----~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVf 89 (538)
T KOG0661|consen 15 IRKLGDGTFGSVYLAKSKETG-----ELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVF 89 (538)
T ss_pred HHHhcCCcceeEEEeeecCCC-----ceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeH
Confidence 356999999999999988876 7899999988733332233478999999998 999999999999988 899999
Q ss_pred ecccCCcHHHHH--------------------------hc--ccccccCCCCccccccCeEEecCCCccc----------
Q 007935 425 DFIRNGSLYAAL--------------------------HG--FGLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 425 Ey~~~GsL~~~L--------------------------~~--~g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
|||+. +|++.+ |. |=|+|++++|+.|.....+++.|||..+
T Consensus 90 E~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpPYTe 168 (538)
T KOG0661|consen 90 EFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSKPPYTE 168 (538)
T ss_pred Hhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEecccccccccccCCCcch
Confidence 99986 775444 33 3489999999998878888889998643
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhh--c--------------CC
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR--E--------------RR 530 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~--~--------------~~ 530 (584)
.+.|.+|.|||++++...|+.+.||||+|||++|+.+-++-|.+...-+ .+..+ ..++. . ..
T Consensus 169 YVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~D-qi~KI-c~VLGtP~~~~~~eg~~La~~mnf 246 (538)
T KOG0661|consen 169 YVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEID-QIYKI-CEVLGTPDKDSWPEGYNLASAMNF 246 (538)
T ss_pred hhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHH-HHHHH-HHHhCCCccccchhHHHHHHHhcc
Confidence 4689999999999988899999999999999999999998888643211 11111 11111 0 01
Q ss_pred CCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHH
Q 007935 531 PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSES 577 (584)
Q Consensus 531 ~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 577 (584)
.++....-.+...+.. ...+.++++.+|++.||++|||+.|+++.
T Consensus 247 ~~P~~~~~~l~~L~p~--~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 247 RFPQVKPSPLKDLLPN--ASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred CCCcCCCCChHHhCcc--cCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 1122222222222221 45678899999999999999999999863
|
|
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-29 Score=256.52 Aligned_cols=202 Identities=18% Similarity=0.282 Sum_probs=167.8
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC--CcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeE
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG--DATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLL 422 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~l 422 (584)
...+||+|+||+|+.+..+.++ ..+|||.+++. -..+.++....|..|+... +||.+++|+.+|++.++.|+
T Consensus 372 ~l~vLGkGsFGkV~lae~k~~~-----e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~f 446 (694)
T KOG0694|consen 372 LLAVLGRGSFGKVLLAELKGTN-----EYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFF 446 (694)
T ss_pred EEEEeccCcCceEEEEEEcCCC-----cEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEE
Confidence 4579999999999999999887 89999999987 3445568888999998877 59999999999999999999
Q ss_pred eeecccCCcH------------------------HHHHhcccc--cccCCCCccccccCeEEecCCC-----------cc
Q 007935 423 ISDFIRNGSL------------------------YAALHGFGL--NRLLPGTSKVTKNETIVTSGTG-----------SR 465 (584)
Q Consensus 423 V~Ey~~~GsL------------------------~~~L~~~g~--~~~~~~~~~i~~~~~~~~~~~~-----------~~ 465 (584)
||||+.||++ .+|||+.|+ +|++-+|+.++.++.+++.||| ++
T Consensus 447 vmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~~Ts 526 (694)
T KOG0694|consen 447 VMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGDRTS 526 (694)
T ss_pred EEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccCCCCCccc
Confidence 9999999997 477888776 7888899888888999998876 34
Q ss_pred cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhh
Q 007935 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIH 545 (584)
Q Consensus 466 ~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~ 545 (584)
+.+||+.|||||++. +..|+.++|.|||||+||||++|+.||.+. +-.++...+..++...+..++.+
T Consensus 527 TfCGTpey~aPEil~-e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gd-----dEee~FdsI~~d~~~yP~~ls~e------ 594 (694)
T KOG0694|consen 527 TFCGTPEFLAPEVLT-EQSYTRAVDWWGLGVLLYEMLVGESPFPGD-----DEEEVFDSIVNDEVRYPRFLSKE------ 594 (694)
T ss_pred cccCChhhcChhhhc-cCcccchhhHHHHHHHHHHHHcCCCCCCCC-----CHHHHHHHHhcCCCCCCCcccHH------
Confidence 568999999999955 579999999999999999999999999853 33455566665555544444443
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCCh
Q 007935 546 AKRQVLATFHIALNCTELDPEFRPRM 571 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RPt~ 571 (584)
.+.|+.+.+.++|++|--+
T Consensus 595 -------a~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 595 -------AIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred -------HHHHHHHHhccCcccccCC
Confidence 3557777999999999766
|
|
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.6e-29 Score=257.87 Aligned_cols=220 Identities=21% Similarity=0.296 Sum_probs=161.4
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
..+.||+|+||.||+|+....+.......||||+++........+.+.+|+++++++ +|||||+++++|.+.+..++||
T Consensus 42 ~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~lv~ 121 (374)
T cd05106 42 FGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVLVIT 121 (374)
T ss_pred ehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCeEEeH
Confidence 457899999999999987554433344689999998654444457789999999999 8999999999999999999999
Q ss_pred ecccCCcHHHHHhc------------------------------------------------------------------
Q 007935 425 DFIRNGSLYAALHG------------------------------------------------------------------ 438 (584)
Q Consensus 425 Ey~~~GsL~~~L~~------------------------------------------------------------------ 438 (584)
||+++|+|.++++.
T Consensus 122 ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (374)
T cd05106 122 EYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEE 201 (374)
T ss_pred hhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccccchh
Confidence 99999999877632
Q ss_pred -----------------------------c--cccccCCCCccccccCeEEecCCCccc-------------ccCCCccc
Q 007935 439 -----------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI-------------SAISNVYL 474 (584)
Q Consensus 439 -----------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~-------------~~gt~~y~ 474 (584)
. -|+++++.|+.+..+...+..|+|... ..++..||
T Consensus 202 ~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~ 281 (374)
T cd05106 202 DTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWM 281 (374)
T ss_pred ccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCcccee
Confidence 1 246666677666666666666765432 12345799
Q ss_pred CccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHHHHHHH
Q 007935 475 APEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLAT 553 (584)
Q Consensus 475 aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 553 (584)
|||++.. ..++.++|||||||++|||++ |+.||....... .......... ....+...++ ++
T Consensus 282 aPE~~~~-~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~-~~~~~~~~~~--~~~~~~~~~~-------------~l 344 (374)
T cd05106 282 APESIFD-CVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS-KFYKMVKRGY--QMSRPDFAPP-------------EI 344 (374)
T ss_pred CHHHhcC-CCCCccccHHHHHHHHHHHHhCCCCCCccccccH-HHHHHHHccc--CccCCCCCCH-------------HH
Confidence 9999654 679999999999999999998 999997533221 1111111111 1111222222 34
Q ss_pred HHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 554 FHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 554 ~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.+++.+||+.||++|||+.+|+++|+++-
T Consensus 345 ~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 345 YSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 55777899999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-29 Score=246.32 Aligned_cols=212 Identities=27% Similarity=0.440 Sum_probs=149.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||.|.||.||+|.+.. ........|+||.++........++|.+|++.+++++||||++++|+|...+..++||||
T Consensus 4 ~~~ig~G~fg~v~~~~~~~-~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQ-KDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEESSEEEEEEEEES-TTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred eeEEccCCCcEEEEEEEEc-ccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 4679999999999999983 122333899999997654444468999999999999999999999999988889999999
Q ss_pred ccCCcHHHHHhcc-----------------------------cccccCCCCccccccCeEEecCCCccc-----------
Q 007935 427 IRNGSLYAALHGF-----------------------------GLNRLLPGTSKVTKNETIVTSGTGSRI----------- 466 (584)
Q Consensus 427 ~~~GsL~~~L~~~-----------------------------g~~~~~~~~~~i~~~~~~~~~~~~~~~----------- 466 (584)
+++|+|.++|+.. -|.++.+.++.+..+..++..+++...
T Consensus 83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~~ 162 (259)
T PF07714_consen 83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKND 162 (259)
T ss_dssp -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEES
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999998888653 134444455556556666666665322
Q ss_pred --ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCC-CCccccChhhhh
Q 007935 467 --SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERR-PLSEVIDPALVK 542 (584)
Q Consensus 467 --~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~d~~~~~ 542 (584)
......|+|||.+.. ..++.++||||||+++||++| |+.||... ....+......... +.+..++.
T Consensus 163 ~~~~~~~~~~aPE~~~~-~~~~~ksDVysfG~~l~ei~~~~~~p~~~~-----~~~~~~~~~~~~~~~~~~~~~~~---- 232 (259)
T PF07714_consen 163 SSQQLPLRYLAPEVLKD-GEYTKKSDVYSFGMLLYEILTLGKFPFSDY-----DNEEIIEKLKQGQRLPIPDNCPK---- 232 (259)
T ss_dssp TTSESGGGGS-HHHHHH-SEESHHHHHHHHHHHHHHHHTTSSGTTTTS-----CHHHHHHHHHTTEETTSBTTSBH----
T ss_pred ccccccccccccccccc-cccccccccccccccccccccccccccccc-----ccccccccccccccceeccchhH----
Confidence 134567999999655 568999999999999999999 78888642 22333333322211 11222222
Q ss_pred hhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHH
Q 007935 543 EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 578 (584)
Q Consensus 543 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L 578 (584)
.+.+++..||+.||++||||.++++.|
T Consensus 233 ---------~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 233 ---------DIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp ---------HHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ---------HHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 345678889999999999999999886
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.1e-29 Score=243.65 Aligned_cols=215 Identities=21% Similarity=0.325 Sum_probs=159.3
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
..+.||+|+||.||+|.+...+ .....||+|.++........+.|.+|+.++++++|||||+++|++..++..++|||
T Consensus 9 ~~~~ig~G~fg~V~~~~~~~~~--~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 86 (266)
T cd05064 9 IERILGTGRFGELCRGCLKLPS--KRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTE 86 (266)
T ss_pred EeeeecccCCCeEEEEEEecCC--CceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEEEE
Confidence 4567999999999999875321 12278999999876444445789999999999999999999999999999999999
Q ss_pred cccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc-----------
Q 007935 426 FIRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI----------- 466 (584)
Q Consensus 426 y~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~----------- 466 (584)
|+++|+|.+++.. . -|+++.+.|+.+..+...+..+++...
T Consensus 87 ~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~ 166 (266)
T cd05064 87 YMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTM 166 (266)
T ss_pred eCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccccccchhccc
Confidence 9999999776643 2 256777777777666666666665321
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC-CCCccccChhhhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER-RPLSEVIDPALVKE 543 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~d~~~~~~ 543 (584)
..++..|+|||++.. ..++.++|||||||++||+++ |+.||.... ............ .+.+..+
T Consensus 167 ~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~ell~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~------- 233 (266)
T cd05064 167 SGKSPVLWAAPEAIQY-HHFSSASDVWSFGIVMWEVMSYGERPYWDMS-----GQDVIKAVEDGFRLPAPRNC------- 233 (266)
T ss_pred CCCCceeecCHHHHhh-CCccchhHHHHHHHHHHHHhcCCCCCcCcCC-----HHHHHHHHHCCCCCCCCCCC-------
Confidence 124567999998554 689999999999999999875 999997532 122222222111 1111111
Q ss_pred hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhh
Q 007935 544 IHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581 (584)
Q Consensus 544 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 581 (584)
...+.+++..||+.+|++||++.||.+.|.++
T Consensus 234 ------~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 234 ------PNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred ------CHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 12455688889999999999999999999765
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-29 Score=247.93 Aligned_cols=219 Identities=17% Similarity=0.270 Sum_probs=163.8
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC--CceeEee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN--DEKLLIS 424 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~--~~~~lV~ 424 (584)
+.||+|.||.||||+...++ +.||+|+++... ......-..|||.||++|+|||||+|.+...+. ..+|||+
T Consensus 123 ~kIGeGTyg~VYkAr~~~tg-----kivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVF 197 (560)
T KOG0600|consen 123 EKIGEGTYGQVYKARDLETG-----KIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVF 197 (560)
T ss_pred HHhcCcchhheeEeeecccC-----cEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEE
Confidence 46999999999999998887 899999998763 333446678999999999999999999999887 6899999
Q ss_pred ecccCCcH--------------------------HHHHhccc--ccccCCCCccccccCeEEecCCCccc----------
Q 007935 425 DFIRNGSL--------------------------YAALHGFG--LNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 425 Ey~~~GsL--------------------------~~~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
|||++ || .+|+|..| |+|++..|++|..++..++.|||...
T Consensus 198 eYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~~ 276 (560)
T KOG0600|consen 198 EYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAPY 276 (560)
T ss_pred ecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCCCccc
Confidence 99997 66 36667665 68899999999888999999998543
Q ss_pred --ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcC----CC---Cc--cc
Q 007935 467 --SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER----RP---LS--EV 535 (584)
Q Consensus 467 --~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~----~~---~~--~~ 535 (584)
.+-|.+|.|||.++....|+.++|+||.||||.||++|++.|.+...- ..+..+++ ..... ++ ++ ..
T Consensus 277 T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEv-eQl~kIfk-lcGSP~e~~W~~~kLP~~~~ 354 (560)
T KOG0600|consen 277 TSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEV-EQLHKIFK-LCGSPTEDYWPVSKLPHATI 354 (560)
T ss_pred ccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHH-HHHHHHHH-HhCCCChhccccccCCcccc
Confidence 246889999999888889999999999999999999999998863221 11111111 11100 00 00 11
Q ss_pred c------ChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 536 I------DPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 536 ~------d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+ ...+... ...-....++|+..+|..||.+|.|+.++++
T Consensus 355 ~kp~~~y~r~l~E~--~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 355 FKPQQPYKRRLRET--FKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred cCCCCcccchHHHH--hccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 1 1111111 0111245678888899999999999999874
|
|
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.3e-29 Score=255.93 Aligned_cols=210 Identities=20% Similarity=0.283 Sum_probs=158.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|+....+ +.||||.+.........+.|.+|++++++++|+|||++++++.+.+..++||||
T Consensus 79 ~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 153 (353)
T PLN00034 79 VNRIGSGAGGTVYKVIHRPTG-----RLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF 153 (353)
T ss_pred hhhccCCCCeEEEEEEECCCC-----CEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence 357999999999999987655 799999997654444457899999999999999999999999999999999999
Q ss_pred ccCCcHH---------------------HHHhccc--ccccCCCCccccccCeEEecCCCcc-----------cccCCCc
Q 007935 427 IRNGSLY---------------------AALHGFG--LNRLLPGTSKVTKNETIVTSGTGSR-----------ISAISNV 472 (584)
Q Consensus 427 ~~~GsL~---------------------~~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~~gt~~ 472 (584)
+++|+|. .|||+.| |+++++.|+.+..++.++..++|.. ...||..
T Consensus 154 ~~~~~L~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~ 233 (353)
T PLN00034 154 MDGGSLEGTHIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSSVGTIA 233 (353)
T ss_pred CCCCcccccccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceecccccccccccccCcc
Confidence 9999883 5567655 6778888888877777787777642 2368899
Q ss_pred ccCcccccc----CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhc-CCCCccccChhhhhhhhHH
Q 007935 473 YLAPEARIY----GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE-RRPLSEVIDPALVKEIHAK 547 (584)
Q Consensus 473 y~aPE~~~~----~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~ 547 (584)
|+|||++.. +...+.++|||||||++|||++|+.||.... ...+.......... .......+++
T Consensus 234 y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~--------- 302 (353)
T PLN00034 234 YMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGR--QGDWASLMCAICMSQPPEAPATASR--------- 302 (353)
T ss_pred ccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCC--CccHHHHHHHHhccCCCCCCCccCH---------
Confidence 999998532 2334569999999999999999999997322 12222222222211 1111222222
Q ss_pred HHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 548 RQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 548 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
++.+++.+||+.||++|||+.|+++
T Consensus 303 ----~l~~li~~~l~~~P~~Rpt~~ell~ 327 (353)
T PLN00034 303 ----EFRHFISCCLQREPAKRWSAMQLLQ 327 (353)
T ss_pred ----HHHHHHHHHccCChhhCcCHHHHhc
Confidence 3456777899999999999999986
|
|
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.6e-29 Score=258.15 Aligned_cols=218 Identities=20% Similarity=0.272 Sum_probs=158.1
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcC-CCceeeeeEEEEeCCceeEee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-HPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~-HpnIV~l~g~~~~~~~~~lV~ 424 (584)
..++||+|+||.||+|+............||||+++........+.|.+|++++++++ |||||+++++|.+.+..++||
T Consensus 41 ~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~lv~ 120 (400)
T cd05105 41 LGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIIT 120 (400)
T ss_pred hhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceEEEE
Confidence 3468999999999999875543333336899999976544444578999999999996 999999999999999999999
Q ss_pred ecccCCcHHHHHhcc-----------------------------------------------------------------
Q 007935 425 DFIRNGSLYAALHGF----------------------------------------------------------------- 439 (584)
Q Consensus 425 Ey~~~GsL~~~L~~~----------------------------------------------------------------- 439 (584)
|||++|+|.++|+..
T Consensus 121 Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (400)
T cd05105 121 EYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEASKY 200 (400)
T ss_pred EecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhhhhhh
Confidence 999999998877531
Q ss_pred --------------------------------------------------------c--ccccCCCCccccccCeEEecC
Q 007935 440 --------------------------------------------------------G--LNRLLPGTSKVTKNETIVTSG 461 (584)
Q Consensus 440 --------------------------------------------------------g--~~~~~~~~~~i~~~~~~~~~~ 461 (584)
+ |+++.+.|+.+..+..++..+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~~kL~D 280 (400)
T cd05105 201 SDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICD 280 (400)
T ss_pred hhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCCEEEEEe
Confidence 1 344445555555555555666
Q ss_pred CCccc-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhh
Q 007935 462 TGSRI-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFR 527 (584)
Q Consensus 462 ~~~~~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~ 527 (584)
+|... ..++..|||||++.. ..++.++|||||||++|||++ |..||.....+. .......
T Consensus 281 fGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~-----~~~~~~~ 354 (400)
T cd05105 281 FGLARDIMHDSNYVSKGSTFLPVKWMAPESIFD-NLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS-----TFYNKIK 354 (400)
T ss_pred CCcceeccccccccccCCcCCCcceEChhhhcC-CCCCchhhHHHHHHHHHHHHHCCCCCCcccchhH-----HHHHHHh
Confidence 65321 235567999998554 678999999999999999997 999987532211 1111111
Q ss_pred cCC--CCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 528 ERR--PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 528 ~~~--~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
... +....+ ...+.+++.+||+.||++|||+.+|.++|+++-
T Consensus 355 ~~~~~~~~~~~-------------~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 355 SGYRMAKPDHA-------------TQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred cCCCCCCCccC-------------CHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 111 111111 224566888899999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-29 Score=252.90 Aligned_cols=200 Identities=23% Similarity=0.318 Sum_probs=155.4
Q ss_pred ceeecCceEEEEEecCCCCCCCceEEEEEEecCC--CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeecc
Q 007935 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG--DATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (584)
Q Consensus 350 iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 427 (584)
||+|+||.||+|+...++ +.||+|.++.. ......+.+.+|++++++++|||||++++++.+.+..++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~-----~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 75 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQ-----RIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFI 75 (312)
T ss_pred CCcCCCeEEEEEEECCCC-----CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCC
Confidence 699999999999988765 78999999753 12334467889999999999999999999999999999999999
Q ss_pred cCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCccc-----------ccC
Q 007935 428 RNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI-----------SAI 469 (584)
Q Consensus 428 ~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~-----------~~g 469 (584)
++|+|.+++. .. -|+++++.|+.+..++.++..++|... ..|
T Consensus 76 ~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 155 (312)
T cd05585 76 NGGELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCG 155 (312)
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccC
Confidence 9999976663 22 357777788777777777777766321 358
Q ss_pred CCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHHH
Q 007935 470 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQ 549 (584)
Q Consensus 470 t~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 549 (584)
|+.|+|||++. +..++.++|||||||++|||+||+.||... ...............++..+++.+
T Consensus 156 t~~y~aPE~~~-~~~~~~~~DvwslGvil~el~tg~~pf~~~-----~~~~~~~~~~~~~~~~~~~~~~~~--------- 220 (312)
T cd05585 156 TPEYLAPELLL-GHGYTKAVDWWTLGVLLYEMLTGLPPFYDE-----NVNEMYRKILQEPLRFPDGFDRDA--------- 220 (312)
T ss_pred CcccCCHHHHc-CCCCCCccceechhHHHHHHHhCCCCcCCC-----CHHHHHHHHHcCCCCCCCcCCHHH---------
Confidence 99999999955 468999999999999999999999999742 234444454444444444444444
Q ss_pred HHHHHHHHhcccCCCCCCCCChHH
Q 007935 550 VLATFHIALNCTELDPEFRPRMRT 573 (584)
Q Consensus 550 ~~~~~~l~~~Cl~~~P~~RPt~~e 573 (584)
.+++.+||+.||++||++..
T Consensus 221 ----~~li~~~L~~dp~~R~~~~~ 240 (312)
T cd05585 221 ----KDLLIGLLSRDPTRRLGYNG 240 (312)
T ss_pred ----HHHHHHHcCCCHHHcCCCCC
Confidence 34666799999999986433
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-29 Score=245.24 Aligned_cols=219 Identities=22% Similarity=0.320 Sum_probs=167.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc--CCCceeeeeEEEEeCC----ce
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV--QHPNIVRLKAFYYAND----EK 420 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l--~HpnIV~l~g~~~~~~----~~ 420 (584)
.+.||+|.||.||+|.+++ ..||||++...+. +.+.||.+|...+ ||+||..+++.-..++ +.
T Consensus 216 ~e~IGkGRyGEVwrG~wrG-------e~VAVKiF~srdE----~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQL 284 (513)
T KOG2052|consen 216 QEIIGKGRFGEVWRGRWRG-------EDVAVKIFSSRDE----RSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQL 284 (513)
T ss_pred EEEecCccccceeeccccC-------CceEEEEecccch----hhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEE
Confidence 4789999999999999987 4899999986433 6789999998865 9999999998765543 58
Q ss_pred eEeeecccCCcHHHHHhcc----------------------------------cccccCCCCccccccCeEEecCCC---
Q 007935 421 LLISDFIRNGSLYAALHGF----------------------------------GLNRLLPGTSKVTKNETIVTSGTG--- 463 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~~L~~~----------------------------------g~~~~~~~~~~i~~~~~~~~~~~~--- 463 (584)
+||.||-++|||+|||... .|+|++..|+.|..++...+.|.|
T Consensus 285 wLvTdYHe~GSL~DyL~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv 364 (513)
T KOG2052|consen 285 WLVTDYHEHGSLYDYLNRNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 364 (513)
T ss_pred EEeeecccCCcHHHHHhhccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeE
Confidence 9999999999999999642 478888888888887766665544
Q ss_pred ------------cccccCCCcccCccccccCC---CCC--CccchhhHHHHHHHHHhC----------CCCCCCCCCCCC
Q 007935 464 ------------SRISAISNVYLAPEARIYGS---KFT--QKCDVYSFGIVLLEILTG----------RLPDAGPENDGK 516 (584)
Q Consensus 464 ------------~~~~~gt~~y~aPE~~~~~~---~~~--~ksDV~SfGvvl~ElltG----------~~p~~~~~~~~~ 516 (584)
....+||.+|||||++...- .+. ..+||||||.|+||+..+ +.||.+....+.
T Consensus 365 ~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DP 444 (513)
T KOG2052|consen 365 RHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDP 444 (513)
T ss_pred EecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCC
Confidence 33458999999999964321 111 368999999999999863 688887766666
Q ss_pred cHHHHHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 517 GLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 517 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
..+++..-..-++ +.+.++++. ...+.+..+.++|..||..+|..|-|+-.|-+.|.++.
T Consensus 445 s~eeMrkVVCv~~--~RP~ipnrW----~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~ 504 (513)
T KOG2052|consen 445 SFEEMRKVVCVQK--LRPNIPNRW----KSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLS 504 (513)
T ss_pred CHHHHhcceeecc--cCCCCCccc----ccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHh
Confidence 6666544433222 222333333 33467778899999999999999999999998888875
|
|
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-29 Score=226.45 Aligned_cols=214 Identities=20% Similarity=0.274 Sum_probs=170.5
Q ss_pred cchhhHhhhcceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEE
Q 007935 337 LELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFY 414 (584)
Q Consensus 337 ~~~~~l~~~~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~ 414 (584)
++++++. .++.||+|.||.||.|+.+... -.||+|++-+.. ......++.||++|-+.|+||||.++++||
T Consensus 19 ~~l~dfe--igr~LgkgkFG~vYlarekks~-----~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~f 91 (281)
T KOG0580|consen 19 WTLDDFE--IGRPLGKGKFGNVYLAREKKSL-----FIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYF 91 (281)
T ss_pred cchhhcc--ccccccCCccccEeEeeeccCC-----cEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhhe
Confidence 3444432 4678999999999999998876 799999997652 222347899999999999999999999999
Q ss_pred EeCCceeEeeecccCCcHHHHHhcc-----------------------------cccccCCCCccccccCeEEecCCCcc
Q 007935 415 YANDEKLLISDFIRNGSLYAALHGF-----------------------------GLNRLLPGTSKVTKNETIVTSGTGSR 465 (584)
Q Consensus 415 ~~~~~~~lV~Ey~~~GsL~~~L~~~-----------------------------g~~~~~~~~~~i~~~~~~~~~~~~~~ 465 (584)
.+....||++||.++|+++..|.+. -|++++++|..+...+..+..+||-+
T Consensus 92 hd~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGws 171 (281)
T KOG0580|consen 92 HDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWS 171 (281)
T ss_pred eccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCce
Confidence 9999999999999999999888631 46888888888877788888887733
Q ss_pred ---------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCcccc
Q 007935 466 ---------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVI 536 (584)
Q Consensus 466 ---------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 536 (584)
+.+||..|.+||. ..+..++.++|+|++||+.||++.|.+||.... ..+..+....-+..++..+
T Consensus 172 V~~p~~kR~tlcgt~dyl~pEm-v~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~-----~~etYkrI~k~~~~~p~~i 245 (281)
T KOG0580|consen 172 VHAPSNKRKTLCGTLDYLPPEM-VEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS-----HSETYKRIRKVDLKFPSTI 245 (281)
T ss_pred eecCCCCceeeecccccCCHhh-cCCCCccchhhHHHHHHHHHHHHhcCCchhhhh-----hHHHHHHHHHccccCCccc
Confidence 3589999999998 556889999999999999999999999998543 2333344444343445555
Q ss_pred ChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 537 DPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 537 d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+....+ ++.+|+..+|.+|.+..|++.
T Consensus 246 s~~a~d-------------lI~~ll~~~p~~r~~l~~v~~ 272 (281)
T KOG0580|consen 246 SGGAAD-------------LISRLLVKNPIERLALTEVMD 272 (281)
T ss_pred ChhHHH-------------HHHHHhccCccccccHHHHhh
Confidence 555444 566699999999999999875
|
|
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.9e-29 Score=252.94 Aligned_cols=205 Identities=20% Similarity=0.279 Sum_probs=158.4
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
++||+|+||.||+++...++ +.||||+++... .......+.+|++++++++||||+++++++.+++..++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e 75 (323)
T cd05571 1 KLLGKGTFGKVILVREKATG-----KYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVME 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCC-----CEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEe
Confidence 36999999999999987765 899999997642 22334678899999999999999999999999999999999
Q ss_pred cccCCcHHHHH-------------------------hcc--cccccCCCCccccccCeEEecCCCcc-----------cc
Q 007935 426 FIRNGSLYAAL-------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSR-----------IS 467 (584)
Q Consensus 426 y~~~GsL~~~L-------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~ 467 (584)
|+++|+|.+++ |+. -|+++++.|+.+..++.++..++|.. ..
T Consensus 76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~ 155 (323)
T cd05571 76 YANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF 155 (323)
T ss_pred CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccce
Confidence 99999996655 333 35778888887777777777777632 13
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHH
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAK 547 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 547 (584)
.||+.|||||++. +..++.++|||||||++|||+||+.||... ...............++..+++.+
T Consensus 156 ~gt~~y~aPE~~~-~~~~~~~~DiwSlG~il~elltg~~Pf~~~-----~~~~~~~~~~~~~~~~p~~~~~~~------- 222 (323)
T cd05571 156 CGTPEYLAPEVLE-DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ-----DHEKLFELILMEEIRFPRTLSPEA------- 222 (323)
T ss_pred ecCccccChhhhc-CCCCCccccCcccchhhhhhhcCCCCCCCC-----CHHHHHHHHHcCCCCCCCCCCHHH-------
Confidence 5899999999954 468999999999999999999999999742 223333333333333344444443
Q ss_pred HHHHHHHHHHhcccCCCCCCCC-----ChHHHHH
Q 007935 548 RQVLATFHIALNCTELDPEFRP-----RMRTVSE 576 (584)
Q Consensus 548 ~~~~~~~~l~~~Cl~~~P~~RP-----t~~ev~~ 576 (584)
.+++.+||+.||++|| ++.++++
T Consensus 223 ------~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 223 ------KSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred ------HHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 4466779999999999 7888864
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.3e-29 Score=251.07 Aligned_cols=158 Identities=20% Similarity=0.289 Sum_probs=132.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+++....+ ..||+|.+.........+.|.+|++++++++|||||++++++..++..++||||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~-----~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (331)
T cd06649 10 ISELGAGNGGVVTKVQHKPSG-----LIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 84 (331)
T ss_pred EEeecCCCCEEEEEEEECCCC-----cEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeec
Confidence 357999999999999988765 789999998654444457899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHh-------------------------cc---cccccCCCCccccccCeEEecCCCccc---------ccC
Q 007935 427 IRNGSLYAALH-------------------------GF---GLNRLLPGTSKVTKNETIVTSGTGSRI---------SAI 469 (584)
Q Consensus 427 ~~~GsL~~~L~-------------------------~~---g~~~~~~~~~~i~~~~~~~~~~~~~~~---------~~g 469 (584)
+++|+|.++++ +. -|+++++.|+.+..++.++..++|... ..|
T Consensus 85 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~g 164 (331)
T cd06649 85 MDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG 164 (331)
T ss_pred CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccccccccCCC
Confidence 99999976653 22 267778888877777777777776432 358
Q ss_pred CCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCC
Q 007935 470 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAG 510 (584)
Q Consensus 470 t~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~ 510 (584)
|..|+|||++. +..++.++|||||||++|||+||+.||..
T Consensus 165 ~~~y~aPE~~~-~~~~~~~~DiwslG~il~el~tg~~p~~~ 204 (331)
T cd06649 165 TRSYMSPERLQ-GTHYSVQSDIWSMGLSLVELAIGRYPIPP 204 (331)
T ss_pred CcCcCCHhHhc-CCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 89999999954 46799999999999999999999999974
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-28 Score=245.80 Aligned_cols=222 Identities=25% Similarity=0.346 Sum_probs=159.4
Q ss_pred ceeceeecCceEEEEEecCCCC-----------CCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEE
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSG-----------MGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYY 415 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~-----------~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~ 415 (584)
.+.||+|+||.||+|.+..+.. ......||+|.++........++|.+|++++.+++|||||++++++.
T Consensus 10 ~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 89 (304)
T cd05096 10 KEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVCV 89 (304)
T ss_pred eeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEe
Confidence 4579999999999998754321 11235799999987544444578999999999999999999999999
Q ss_pred eCCceeEeeecccCCcHHHHHh--------------------------------------------cc--cccccCCCCc
Q 007935 416 ANDEKLLISDFIRNGSLYAALH--------------------------------------------GF--GLNRLLPGTS 449 (584)
Q Consensus 416 ~~~~~~lV~Ey~~~GsL~~~L~--------------------------------------------~~--g~~~~~~~~~ 449 (584)
+.+..++||||+++|+|.+++. +. -|+++++.|+
T Consensus 90 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp~Ni 169 (304)
T cd05096 90 DEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNC 169 (304)
T ss_pred cCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCcchhhe
Confidence 9999999999999999976653 22 2567777887
Q ss_pred cccccCeEEecCCCccc-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh--CCCCCCCCCCC
Q 007935 450 KVTKNETIVTSGTGSRI-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT--GRLPDAGPEND 514 (584)
Q Consensus 450 ~i~~~~~~~~~~~~~~~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt--G~~p~~~~~~~ 514 (584)
.+..+..++..++|... ..++..|||||++.. ..++.++|||||||++|||++ +..||......
T Consensus 170 ll~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~ 248 (304)
T cd05096 170 LVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILM-GKFTTASDVWAFGVTLWEILMLCKEQPYGELTDE 248 (304)
T ss_pred EEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhc-CCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHH
Confidence 77777777888876432 123668999998654 579999999999999999987 56677643221
Q ss_pred CCcHHHHHHHHhhcC-CCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHh
Q 007935 515 GKGLESLVRKAFRER-RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580 (584)
Q Consensus 515 ~~~l~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 580 (584)
.....+....... ........+. +...+.+++.+||+.||++|||+.||.+.|++
T Consensus 249 --~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 249 --QVIENAGEFFRDQGRQVYLFRPPP---------CPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred --HHHHHHHHHhhhccccccccCCCC---------CCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 1222222211111 0000000111 12345678899999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.5e-29 Score=251.25 Aligned_cols=205 Identities=20% Similarity=0.280 Sum_probs=157.2
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
++||+|+||.||+++....+ ..||+|.++... .......+.+|++++++++||||+++++++...+..++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E 75 (323)
T cd05595 1 KLLGKGTFGKVILVREKATG-----RYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVME 75 (323)
T ss_pred CeeeeCCCEEEEEEEECCCC-----CEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEe
Confidence 36999999999999987665 799999997641 22334678899999999999999999999999999999999
Q ss_pred cccCCcHHHHH-------------------------hccc--ccccCCCCccccccCeEEecCCCcc-----------cc
Q 007935 426 FIRNGSLYAAL-------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSR-----------IS 467 (584)
Q Consensus 426 y~~~GsL~~~L-------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~ 467 (584)
|+++|+|.+++ |+.| |+++++.|+.+..++.++..++|.. ..
T Consensus 76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~ 155 (323)
T cd05595 76 YANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF 155 (323)
T ss_pred CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccc
Confidence 99999996554 3333 5777888887777777777777632 23
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHH
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAK 547 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 547 (584)
.||..|+|||++.. ..++.++|||||||++|||++|+.||.... ..............++..+++.+
T Consensus 156 ~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~g~~Pf~~~~-----~~~~~~~~~~~~~~~p~~~~~~~------- 222 (323)
T cd05595 156 CGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-----HERLFELILMEEIRFPRTLSPEA------- 222 (323)
T ss_pred cCCcCcCCcccccC-CCCCchhchhhhHHHHHHHHhCCCCCCCCC-----HHHHHHHHhcCCCCCCCCCCHHH-------
Confidence 58899999999554 678999999999999999999999997422 22333333333333444444444
Q ss_pred HHHHHHHHHHhcccCCCCCCCC-----ChHHHHH
Q 007935 548 RQVLATFHIALNCTELDPEFRP-----RMRTVSE 576 (584)
Q Consensus 548 ~~~~~~~~l~~~Cl~~~P~~RP-----t~~ev~~ 576 (584)
.+++.+||+.||++|| ++.++++
T Consensus 223 ------~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 223 ------KSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred ------HHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 3466679999999998 7888764
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.4e-29 Score=251.11 Aligned_cols=205 Identities=16% Similarity=0.206 Sum_probs=158.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|+....+ +.||||.++... .....+.+.+|++++++++|||||++++++.+++..++||
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 23 GETLGTGSFGRVRIAKHKGTG-----EYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred EEEEEecCCeEEEEEEECCCC-----CEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 467999999999999988765 799999997542 2223467899999999999999999999999999999999
Q ss_pred ecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCcc--------cccC
Q 007935 425 DFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR--------ISAI 469 (584)
Q Consensus 425 Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~--------~~~g 469 (584)
||+++|+|.+++. +. -|+++++.|+.+..++.++..++|.. ...|
T Consensus 98 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~g 177 (329)
T PTZ00263 98 EFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTFTLCG 177 (329)
T ss_pred cCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCCcceecC
Confidence 9999999976653 33 35777778877777777777777643 2368
Q ss_pred CCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHHH
Q 007935 470 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQ 549 (584)
Q Consensus 470 t~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 549 (584)
|+.|+|||++.. ..++.++|||||||++|||+||+.||.+. ...............++..+++.+
T Consensus 178 t~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~~pf~~~-----~~~~~~~~i~~~~~~~p~~~~~~~--------- 242 (329)
T PTZ00263 178 TPEYLAPEVIQS-KGHGKAVDWWTMGVLLYEFIAGYPPFFDD-----TPFRIYEKILAGRLKFPNWFDGRA--------- 242 (329)
T ss_pred ChhhcCHHHHcC-CCCCCcceeechHHHHHHHHcCCCCCCCC-----CHHHHHHHHhcCCcCCCCCCCHHH---------
Confidence 999999999554 67899999999999999999999999742 222333333333333444444443
Q ss_pred HHHHHHHHhcccCCCCCCCCC-----hHHHH
Q 007935 550 VLATFHIALNCTELDPEFRPR-----MRTVS 575 (584)
Q Consensus 550 ~~~~~~l~~~Cl~~~P~~RPt-----~~ev~ 575 (584)
.+++.+||+.||.+||+ +.+++
T Consensus 243 ----~~li~~~L~~dP~~R~~~~~~~~~~ll 269 (329)
T PTZ00263 243 ----RDLVKGLLQTDHTKRLGTLKGGVADVK 269 (329)
T ss_pred ----HHHHHHHhhcCHHHcCCCCCCCHHHHh
Confidence 35677799999999997 56665
|
|
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-28 Score=244.46 Aligned_cols=210 Identities=19% Similarity=0.171 Sum_probs=154.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|....++ +.||||.+.... .......+.+|++++++++|+||+++++++.+++..++||
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~-----~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~ 79 (285)
T cd05631 5 YRVLGKGGFGEVCACQVRATG-----KMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVL 79 (285)
T ss_pred EEEEecCCCEEEEEEEEecCC-----ceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEE
Confidence 467999999999999987765 899999987542 2222356889999999999999999999999999999999
Q ss_pred ecccCCcHHHHHh---------------------------cc--cccccCCCCccccccCeEEecCCCcc----------
Q 007935 425 DFIRNGSLYAALH---------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR---------- 465 (584)
Q Consensus 425 Ey~~~GsL~~~L~---------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~---------- 465 (584)
||+++|+|.+++. .. -|+++.+.|+.+..+..++..++|..
T Consensus 80 e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 159 (285)
T cd05631 80 TIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVR 159 (285)
T ss_pred EecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCeec
Confidence 9999999965553 22 35667777777766666777776542
Q ss_pred cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhh
Q 007935 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIH 545 (584)
Q Consensus 466 ~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~ 545 (584)
...||..|||||++.. ..++.++|||||||++|||++|+.||....... ....+..............+++
T Consensus 160 ~~~g~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~------- 230 (285)
T cd05631 160 GRVGTVGYMAPEVINN-EKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERV-KREEVDRRVKEDQEEYSEKFSE------- 230 (285)
T ss_pred CCCCCCCccCHhhhcC-CCCCcccCchhHHHHHHHHHhCCCCCCCCCcch-hHHHHHHHhhcccccCCccCCH-------
Confidence 2357899999999654 689999999999999999999999998533211 1112222111111122222333
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCC-----hHHHHH
Q 007935 546 AKRQVLATFHIALNCTELDPEFRPR-----MRTVSE 576 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RPt-----~~ev~~ 576 (584)
.+.+++.+||+.||++||+ ++|+++
T Consensus 231 ------~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 231 ------DAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred ------HHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 3445777799999999997 777775
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.8e-30 Score=258.67 Aligned_cols=209 Identities=22% Similarity=0.313 Sum_probs=163.4
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
..-++|+|.||+||.|+..++. ..+|||.+....+ ...+-...||.+.++++|+|||+++|.|.+++..-+.||
T Consensus 579 ervVLGKGTYG~VYA~RD~~tq-----vrIaIKEIpekds-r~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFME 652 (1226)
T KOG4279|consen 579 ERVVLGKGTYGTVYAARDMDTQ-----VRIAIKEIPEKDS-REVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFME 652 (1226)
T ss_pred ceEEeecCceeEEEeeccccce-----eEEEeeecccccc-hhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEee
Confidence 3468999999999999998886 7899999987543 334778899999999999999999999999999999999
Q ss_pred cccCCcHHHHHhc----------------------------c--cccccCCCCcccccc-CeEEecCCCcc---------
Q 007935 426 FIRNGSLYAALHG----------------------------F--GLNRLLPGTSKVTKN-ETIVTSGTGSR--------- 465 (584)
Q Consensus 426 y~~~GsL~~~L~~----------------------------~--g~~~~~~~~~~i~~~-~~~~~~~~~~~--------- 465 (584)
-++||+|.+.|+. . .|++++.+|..|..- +.+++++||++
T Consensus 653 qVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~ 732 (1226)
T KOG4279|consen 653 QVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPC 732 (1226)
T ss_pred cCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccCCcc
Confidence 9999999666643 2 467788888776554 67777888753
Q ss_pred --cccCCCcccCccccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHh-hcCCCCccccChhhh
Q 007935 466 --ISAISNVYLAPEARIYG-SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF-RERRPLSEVIDPALV 541 (584)
Q Consensus 466 --~~~gt~~y~aPE~~~~~-~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~d~~~~ 541 (584)
...||..|||||++..| ..|+.++|||||||++.||.||++||...... -..+++-.. ...+++++.++
T Consensus 733 TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgsp---qAAMFkVGmyKvHP~iPeels---- 805 (1226)
T KOG4279|consen 733 TETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSP---QAAMFKVGMYKVHPPIPEELS---- 805 (1226)
T ss_pred ccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCCh---hHhhhhhcceecCCCCcHHHH----
Confidence 24799999999998766 35899999999999999999999999754332 222333222 22233333222
Q ss_pred hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 542 KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 542 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+...++++|.++||.+||++.++++
T Consensus 806 ---------aeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 806 ---------AEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred ---------HHHHHHHHHHcCCCcccCccHHHhcc
Confidence 24455888899999999999999875
|
|
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.1e-28 Score=250.17 Aligned_cols=219 Identities=21% Similarity=0.251 Sum_probs=158.0
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcC-CCceeeeeEEEEeCCceeEee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-HPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~-HpnIV~l~g~~~~~~~~~lV~ 424 (584)
..+.||+|+||.||+|++.........+.||||+++........+.+.+|++++.++. |||||+++|+|.+.+..++||
T Consensus 41 ~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~iv~ 120 (401)
T cd05107 41 LGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYIIT 120 (401)
T ss_pred hhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcEEEE
Confidence 4578999999999999976533333347899999986544444467999999999997 999999999999999999999
Q ss_pred ecccCCcHHHHHhccc----------------------------------------------------------------
Q 007935 425 DFIRNGSLYAALHGFG---------------------------------------------------------------- 440 (584)
Q Consensus 425 Ey~~~GsL~~~L~~~g---------------------------------------------------------------- 440 (584)
||+++|+|.++|+..+
T Consensus 121 E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (401)
T cd05107 121 EYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGTVK 200 (401)
T ss_pred eccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcchhhhh
Confidence 9999999988886421
Q ss_pred -------------------------------------------------------------ccccCCCCccccccCeEEe
Q 007935 441 -------------------------------------------------------------LNRLLPGTSKVTKNETIVT 459 (584)
Q Consensus 441 -------------------------------------------------------------~~~~~~~~~~i~~~~~~~~ 459 (584)
|+++.+.|+.+..+...+.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~~~kL 280 (401)
T cd05107 201 YADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKI 280 (401)
T ss_pred hhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeCCCEEEE
Confidence 3444445544544455555
Q ss_pred cCCCccc-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHH
Q 007935 460 SGTGSRI-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKA 525 (584)
Q Consensus 460 ~~~~~~~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~ 525 (584)
.++|... ..++..|||||++.. ..++.++|||||||++|||++ |+.||...... .......
T Consensus 281 ~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~----~~~~~~~ 355 (401)
T cd05107 281 CDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFN-NLYTTLSDVWSFGILLWEIFTLGGTPYPELPMN----EQFYNAI 355 (401)
T ss_pred EecCcceecccccccccCCCcCCCCceeChHHhcC-CCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCch----HHHHHHH
Confidence 5655321 234667999998554 578999999999999999998 89998643221 1111111
Q ss_pred hhcC-CCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 526 FRER-RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 526 ~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.... ...+..++ ..+.+++.+||+.+|.+||+++||++.|+++-
T Consensus 356 ~~~~~~~~p~~~~-------------~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 356 KRGYRMAKPAHAS-------------DEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred HcCCCCCCCCCCC-------------HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 1111 11111122 24556788899999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.2e-28 Score=240.83 Aligned_cols=216 Identities=25% Similarity=0.371 Sum_probs=161.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|.............||+|.++........++|.+|++++++++||||+++++++...+..+++|||
T Consensus 10 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~ 89 (283)
T cd05048 10 LEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEY 89 (283)
T ss_pred hhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEEEEec
Confidence 35699999999999998765434445789999998654444457799999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc-----------------------------------------c--cccccCCCCccccccCeEEecCCC
Q 007935 427 IRNGSLYAALHG-----------------------------------------F--GLNRLLPGTSKVTKNETIVTSGTG 463 (584)
Q Consensus 427 ~~~GsL~~~L~~-----------------------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~ 463 (584)
+++|+|.+++.. . -|.++.+.|+.+..+..++..+++
T Consensus 90 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~L~dfg 169 (283)
T cd05048 90 LAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVKISDFG 169 (283)
T ss_pred CCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCCcEEECCCc
Confidence 999999877742 1 245666677666666666666665
Q ss_pred ccc-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC
Q 007935 464 SRI-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER 529 (584)
Q Consensus 464 ~~~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~ 529 (584)
... ..++..|+|||++.. ..++.++|||||||++|||+| |..||.+... .+.........
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~il~el~~~g~~p~~~~~~-----~~~~~~i~~~~ 243 (283)
T cd05048 170 LSRDIYSADYYRVQSKSLLPVRWMPPEAILY-GKFTTESDIWSFGVVLWEIFSYGLQPYYGFSN-----QEVIEMIRSRQ 243 (283)
T ss_pred ceeeccccccccccCCCcccccccCHHHhcc-CcCchhhhHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHHHHcCC
Confidence 321 234677999998655 578999999999999999998 9999875322 22222222111
Q ss_pred -CCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhh
Q 007935 530 -RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581 (584)
Q Consensus 530 -~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 581 (584)
...+..+ ..++.+++.+||+.||++||++.||++.|+++
T Consensus 244 ~~~~~~~~-------------~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 244 LLPCPEDC-------------PARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred cCCCcccC-------------CHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 1111112 23456688889999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.8e-29 Score=246.65 Aligned_cols=206 Identities=18% Similarity=0.181 Sum_probs=158.4
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|....++ +.||+|++.... .....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 6 IKTVGTGTFGRVHLVRDRISE-----HYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred eeeeecCCCeEEEEEEEcCCC-----CEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 457999999999999988665 799999997532 2223467889999999999999999999999999999999
Q ss_pred ecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCccc--------ccC
Q 007935 425 DFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI--------SAI 469 (584)
Q Consensus 425 Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~--------~~g 469 (584)
||+++|+|.++++ +. -|+++.+.|+.+..++.++..++|... ..|
T Consensus 81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~g 160 (291)
T cd05612 81 EYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWTLCG 160 (291)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCCcccccC
Confidence 9999999976653 22 356777778777777777777776432 358
Q ss_pred CCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHHH
Q 007935 470 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQ 549 (584)
Q Consensus 470 t~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 549 (584)
|+.|+|||++. +..++.++|||||||++|||+||+.||... ...............++..+++.+
T Consensus 161 t~~y~aPE~~~-~~~~~~~~DiwSlG~il~~l~~g~~pf~~~-----~~~~~~~~i~~~~~~~~~~~~~~~--------- 225 (291)
T cd05612 161 TPEYLAPEVIQ-SKGHNKAVDWWALGILIYEMLVGYPPFFDD-----NPFGIYEKILAGKLEFPRHLDLYA--------- 225 (291)
T ss_pred ChhhcCHHHHc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHhCCcCCCccCCHHH---------
Confidence 89999999854 467899999999999999999999999752 223333333333333444444443
Q ss_pred HHHHHHHHhcccCCCCCCCCC-----hHHHHH
Q 007935 550 VLATFHIALNCTELDPEFRPR-----MRTVSE 576 (584)
Q Consensus 550 ~~~~~~l~~~Cl~~~P~~RPt-----~~ev~~ 576 (584)
.+++.+||+.||.+||+ +.|+++
T Consensus 226 ----~~li~~~l~~dp~~R~~~~~~~~~~~l~ 253 (291)
T cd05612 226 ----KDLIKKLLVVDRTRRLGNMKNGADDVKN 253 (291)
T ss_pred ----HHHHHHHcCCCHHHccCCccCCHHHHhc
Confidence 44677799999999995 777764
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-28 Score=248.53 Aligned_cols=205 Identities=20% Similarity=0.246 Sum_probs=158.5
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
++||+|+||.||+++....+ +.||||++.... .....+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~-----~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~E 75 (328)
T cd05593 1 KLLGKGTFGKVILVREKASG-----KYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVME 75 (328)
T ss_pred CeeeeCCCEEEEEEEECCCC-----CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEe
Confidence 36999999999999987765 899999997642 23334678999999999999999999999999999999999
Q ss_pred cccCCcHHHHH-------------------------hcc--cccccCCCCccccccCeEEecCCCccc-----------c
Q 007935 426 FIRNGSLYAAL-------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSRI-----------S 467 (584)
Q Consensus 426 y~~~GsL~~~L-------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~-----------~ 467 (584)
|+++|+|.+++ |.. .|+++++.|+.+..++.++..++|... .
T Consensus 76 y~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~ 155 (328)
T cd05593 76 YVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTF 155 (328)
T ss_pred CCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccc
Confidence 99999996554 333 357788888877777777777776321 3
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHH
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAK 547 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 547 (584)
.||+.|+|||++.. ..++.++|||||||++|||+||+.||... ...............++..+++++
T Consensus 156 ~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltG~~Pf~~~-----~~~~~~~~~~~~~~~~p~~~~~~~------- 222 (328)
T cd05593 156 CGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQ-----DHEKLFELILMEDIKFPRTLSADA------- 222 (328)
T ss_pred cCCcCccChhhhcC-CCCCccCCccccchHHHHHhhCCCCCCCC-----CHHHHHHHhccCCccCCCCCCHHH-------
Confidence 58999999999544 67899999999999999999999999742 223333333333333444444443
Q ss_pred HHHHHHHHHHhcccCCCCCCCC-----ChHHHHH
Q 007935 548 RQVLATFHIALNCTELDPEFRP-----RMRTVSE 576 (584)
Q Consensus 548 ~~~~~~~~l~~~Cl~~~P~~RP-----t~~ev~~ 576 (584)
.+++.+||+.||++|| ++.|+++
T Consensus 223 ------~~li~~~L~~dP~~R~~~~~~~~~~il~ 250 (328)
T cd05593 223 ------KSLLSGLLIKDPNKRLGGGPDDAKEIMR 250 (328)
T ss_pred ------HHHHHHHcCCCHHHcCCCCCCCHHHHhc
Confidence 4466679999999997 8888874
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=244.79 Aligned_cols=201 Identities=21% Similarity=0.305 Sum_probs=154.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC--CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG--DATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
-.+||+|+||.||.|+.+++| ..+|+|++++. ....+++....|-.+|...++|+||+|+..|++.+..||||
T Consensus 146 Lk~IgkGAfGeVrLarKk~Tg-----~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiM 220 (550)
T KOG0605|consen 146 LKVIGKGAFGEVRLARKKDTG-----EIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIM 220 (550)
T ss_pred heeeccccceeEEEEEEccCC-----cEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEE
Confidence 468999999999999999987 89999999987 23344577889999999999999999999999999999999
Q ss_pred ecccCCcHHHHH-------------------------h--cccccccCCCCccccccCeEEecCCCcc------------
Q 007935 425 DFIRNGSLYAAL-------------------------H--GFGLNRLLPGTSKVTKNETIVTSGTGSR------------ 465 (584)
Q Consensus 425 Ey~~~GsL~~~L-------------------------~--~~g~~~~~~~~~~i~~~~~~~~~~~~~~------------ 465 (584)
||++|||+...| | ++.|+|++++|.+|...++++.+|||.+
T Consensus 221 EylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~ 300 (550)
T KOG0605|consen 221 EYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESY 300 (550)
T ss_pred EecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhhhhhhhh
Confidence 999999985444 3 3468999999988877777776555410
Q ss_pred ----------------------------------------------cccCCCcccCccccccCCCCCCccchhhHHHHHH
Q 007935 466 ----------------------------------------------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLL 499 (584)
Q Consensus 466 ----------------------------------------------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ 499 (584)
..+||+.|||||+++. ..|+..+|.||+|||+|
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~-kgY~~~cDwWSLG~Imy 379 (550)
T KOG0605|consen 301 RLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLG-KGYGKECDWWSLGCIMY 379 (550)
T ss_pred cchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhc-CCCCccccHHHHHHHHH
Confidence 0268999999999665 67999999999999999
Q ss_pred HHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC--CccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCC
Q 007935 500 EILTGRLPDAGPENDGKGLESLVRKAFRERRP--LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPR 570 (584)
Q Consensus 500 ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt 570 (584)
||+.|-+||.+... .+..+.....+.. .++..+.. .+..+++.+|+. ||++|--
T Consensus 380 EmLvGyPPF~s~tp-----~~T~rkI~nwr~~l~fP~~~~~s-----------~eA~DLI~rll~-d~~~RLG 435 (550)
T KOG0605|consen 380 EMLVGYPPFCSETP-----QETYRKIVNWRETLKFPEEVDLS-----------DEAKDLITRLLC-DPENRLG 435 (550)
T ss_pred HHHhCCCCCCCCCH-----HHHHHHHHHHhhhccCCCcCccc-----------HHHHHHHHHHhc-CHHHhcC
Confidence 99999999985332 3333333332211 11111111 234556777888 9999964
|
|
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.2e-28 Score=235.92 Aligned_cols=206 Identities=21% Similarity=0.345 Sum_probs=155.4
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||++....+ ..+|+|.+...... .++|.+|++++++++||||+++++++.+.+..++||||
T Consensus 9 ~~~lg~G~~~~vy~~~~~~~------~~~a~K~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~ 80 (256)
T cd05114 9 MKELGSGQFGVVHLGKWRAQ------IKVAIKAINEGAMS--EEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEF 80 (256)
T ss_pred eeEecCCcCceEEEEEeccC------ceEEEEecccCCcc--HHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEc
Confidence 35699999999999988765 68999998754322 36899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc------------
Q 007935 427 IRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI------------ 466 (584)
Q Consensus 427 ~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~------------ 466 (584)
+++|+|.++++. . -|+++.+.|..+..+...+..+++...
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~ 160 (256)
T cd05114 81 MENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSG 160 (256)
T ss_pred CCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCceeccCC
Confidence 999999877753 1 256666777777666666676665322
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCC-CccccChhhhhhh
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP-LSEVIDPALVKEI 544 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~d~~~~~~~ 544 (584)
..++..|+|||++. +..++.++||||||+++|||++ |+.||.... ..+........... .+...+
T Consensus 161 ~~~~~~y~aPE~~~-~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~-----~~~~~~~i~~~~~~~~~~~~~------- 227 (256)
T cd05114 161 AKFPVKWSPPEVFN-FSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKS-----NYEVVEMISRGFRLYRPKLAS------- 227 (256)
T ss_pred CCCchhhCChhhcc-cCccchhhhhHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHHHCCCCCCCCCCCC-------
Confidence 12345799999954 4678999999999999999999 899986422 22223332222211 111111
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHH
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~ 579 (584)
..+.+++.+||+.+|++||++.|+++.|.
T Consensus 228 ------~~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 228 ------MTVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred ------HHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 24567888999999999999999999873
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.3e-28 Score=234.82 Aligned_cols=208 Identities=26% Similarity=0.372 Sum_probs=155.4
Q ss_pred eceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeeccc
Q 007935 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIR 428 (584)
Q Consensus 349 ~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~ 428 (584)
.||+|+||.||+|.....+ +.||+|.+...........|.+|++++++++||||++++++|...+..++||||++
T Consensus 2 ~lg~g~~g~vy~~~~~~~~-----~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 76 (252)
T cd05084 2 RIGRGNFGEVFSGRLRADN-----TPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQ 76 (252)
T ss_pred ccCcccCccEEEEEEecCC-----ceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeecc
Confidence 5899999999999987655 78999998765444445779999999999999999999999999999999999999
Q ss_pred CCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCcccc-------------
Q 007935 429 NGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRIS------------- 467 (584)
Q Consensus 429 ~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~~------------- 467 (584)
+|+|.++++. . .|+++.+.|+.+..++..+..+++....
T Consensus 77 ~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 156 (252)
T cd05084 77 GGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMK 156 (252)
T ss_pred CCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCC
Confidence 9999777642 2 3566677777776666677777654321
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhc-CCCCccccChhhhhhhh
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRE-RRPLSEVIDPALVKEIH 545 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~d~~~~~~~~ 545 (584)
..+..|+|||.+.. ..++.++|||||||++|||++ |..||..... .......... ....+...
T Consensus 157 ~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~--------- 221 (252)
T cd05084 157 QIPVKWTAPEALNY-GRYSSESDVWSFGILLWEAFSLGAVPYANLSN-----QQTREAIEQGVRLPCPELC--------- 221 (252)
T ss_pred CCceeecCchhhcC-CCCChHHHHHHHHHHHHHHHhCCCCCccccCH-----HHHHHHHHcCCCCCCcccC---------
Confidence 11345999998554 578999999999999999998 8888864221 1111111111 11111111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHh
Q 007935 546 AKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 580 (584)
...+.+++.+||+.+|++|||+.|+.++|++
T Consensus 222 ----~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 252 (252)
T cd05084 222 ----PDAVYRLMERCWEYDPGQRPSFSTVHQELQS 252 (252)
T ss_pred ----CHHHHHHHHHHcCCChhhCcCHHHHHHHHhC
Confidence 1245668888999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-28 Score=225.83 Aligned_cols=190 Identities=17% Similarity=0.263 Sum_probs=160.7
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEe
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLI 423 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV 423 (584)
.-..+|.|+||.|..++.+.++ ..+|+|++++.. ...+.+...+|..+|+.+.||++|++++.|.+.+..|+|
T Consensus 48 ~~~tlGtGSFGrV~LVr~k~~g-----~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymv 122 (355)
T KOG0616|consen 48 RLKTLGTGSFGRVHLVREKHSG-----NYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMV 122 (355)
T ss_pred heeeeccCccceEEEEEEccCC-----ceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEE
Confidence 3467999999999999998876 899999998762 233446678999999999999999999999999999999
Q ss_pred eecccCCcHHHHHhc-------------------------cc--ccccCCCCccccccCeEEecCCCcc--------ccc
Q 007935 424 SDFIRNGSLYAALHG-------------------------FG--LNRLLPGTSKVTKNETIVTSGTGSR--------ISA 468 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~~-------------------------~g--~~~~~~~~~~i~~~~~~~~~~~~~~--------~~~ 468 (584)
|||++||.|+.||+. .+ .++++++|..++.++.++..|||.+ +.+
T Consensus 123 meyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT~TlC 202 (355)
T KOG0616|consen 123 MEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRTWTLC 202 (355)
T ss_pred EeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecCcEEEec
Confidence 999999999877764 22 3889999999999999999888743 358
Q ss_pred CCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhH
Q 007935 469 ISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 546 (584)
Q Consensus 469 gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 546 (584)
||+.|+|||++.. ..|+.++|.|||||++|||+.|.+||.... -..+..++...+..++..+++.+++++..
T Consensus 203 GTPeYLAPEii~s-k~ynkavDWWalGVLIYEMlaG~pPF~~~~-----~~~iY~KI~~~~v~fP~~fs~~~kdLl~~ 274 (355)
T KOG0616|consen 203 GTPEYLAPEIIQS-KGYNKAVDWWALGVLIYEMLAGYPPFYDDN-----PIQIYEKILEGKVKFPSYFSSDAKDLLKK 274 (355)
T ss_pred CCccccChHHhhc-CCCCcchhHHHHHHHHHHHHcCCCCCcCCC-----hHHHHHHHHhCcccCCcccCHHHHHHHHH
Confidence 9999999999554 789999999999999999999999998532 25566777777777899999998876655
|
|
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.2e-28 Score=237.97 Aligned_cols=215 Identities=26% Similarity=0.380 Sum_probs=159.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|...+.........||||.++........+.|.+|++++++++||||+++++++...+..++||||
T Consensus 10 ~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 89 (280)
T cd05049 10 KRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPIMVFEY 89 (280)
T ss_pred HhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeEEEEec
Confidence 35799999999999988654322334789999998754443457899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcc-----------------------------------------cccccCCCCccccccCeEEecCCCcc
Q 007935 427 IRNGSLYAALHGF-----------------------------------------GLNRLLPGTSKVTKNETIVTSGTGSR 465 (584)
Q Consensus 427 ~~~GsL~~~L~~~-----------------------------------------g~~~~~~~~~~i~~~~~~~~~~~~~~ 465 (584)
+++|+|.++++.. -|+++.+.|+.+..+...+..+++..
T Consensus 90 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~kl~d~g~~ 169 (280)
T cd05049 90 MEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVKIGDFGMS 169 (280)
T ss_pred CCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeEEECCcccc
Confidence 9999998777421 24556667766666666666666533
Q ss_pred c-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCC
Q 007935 466 I-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531 (584)
Q Consensus 466 ~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~ 531 (584)
. ..++..|+|||++.. ..++.++|||||||++|||++ |+.||..... .............
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~-----~~~~~~~~~~~~~ 243 (280)
T cd05049 170 RDVYTTDYYRVGGHTMLPIRWMPPESIMY-RKFTTESDVWSFGVVLWEIFTYGKQPWYGLSN-----EEVIECITQGRLL 243 (280)
T ss_pred eecccCcceecCCCCcccceecChhhhcc-CCcchhhhHHHHHHHHHHHHhcCCCCCCCCCH-----HHHHHHHHcCCcC
Confidence 2 123567999998554 679999999999999999999 9999874322 2222222222111
Q ss_pred -CccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHh
Q 007935 532 -LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580 (584)
Q Consensus 532 -~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 580 (584)
....++ ..+.+++.+||+.||++||++.||++.|++
T Consensus 244 ~~~~~~~-------------~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 244 QRPRTCP-------------SEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred CCCCCCC-------------HHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 111122 245668888999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.2e-28 Score=247.46 Aligned_cols=207 Identities=19% Similarity=0.233 Sum_probs=157.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|.....+. ..||+|++.... .....+.+.+|+++++.++|||||++++++.+++..++||
T Consensus 35 ~~~ig~G~~g~Vy~a~~~~~~~----~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 110 (340)
T PTZ00426 35 IRTLGTGSFGRVILATYKNEDF----PPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLVL 110 (340)
T ss_pred EEEEeecCCeEEEEEEEECCCC----eEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEEE
Confidence 4679999999999998755421 589999986531 2233467899999999999999999999999999999999
Q ss_pred ecccCCcHHHHHh-------------------------ccc--ccccCCCCccccccCeEEecCCCcc--------cccC
Q 007935 425 DFIRNGSLYAALH-------------------------GFG--LNRLLPGTSKVTKNETIVTSGTGSR--------ISAI 469 (584)
Q Consensus 425 Ey~~~GsL~~~L~-------------------------~~g--~~~~~~~~~~i~~~~~~~~~~~~~~--------~~~g 469 (584)
||+++|+|.+++. +.| |+++++.|+.+..++.++..++|.. ...|
T Consensus 111 Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~~~~~~g 190 (340)
T PTZ00426 111 EFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRTYTLCG 190 (340)
T ss_pred eCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCCcceecC
Confidence 9999999976653 333 5778888888877777777777643 2368
Q ss_pred CCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHHH
Q 007935 470 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQ 549 (584)
Q Consensus 470 t~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 549 (584)
|+.|||||++.. ..++.++|||||||++|||+||+.||.... ..............++..+++.+
T Consensus 191 t~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~Pf~~~~-----~~~~~~~i~~~~~~~p~~~~~~~--------- 255 (340)
T PTZ00426 191 TPEYIAPEILLN-VGHGKAADWWTLGIFIYEILVGCPPFYANE-----PLLIYQKILEGIIYFPKFLDNNC--------- 255 (340)
T ss_pred ChhhcCHHHHhC-CCCCccccccchhhHHHHHhcCCCCCCCCC-----HHHHHHHHhcCCCCCCCCCCHHH---------
Confidence 999999999554 678999999999999999999999997532 12223333333333334444433
Q ss_pred HHHHHHHHhcccCCCCCCCC-----ChHHHHH
Q 007935 550 VLATFHIALNCTELDPEFRP-----RMRTVSE 576 (584)
Q Consensus 550 ~~~~~~l~~~Cl~~~P~~RP-----t~~ev~~ 576 (584)
.+++.+|++.||++|+ +++|+++
T Consensus 256 ----~~li~~~l~~dp~~R~~~~~~~~~~~~~ 283 (340)
T PTZ00426 256 ----KHLMKKLLSHDLTKRYGNLKKGAQNVKE 283 (340)
T ss_pred ----HHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence 3467779999999995 7888764
|
|
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.9e-28 Score=244.48 Aligned_cols=223 Identities=14% Similarity=0.163 Sum_probs=155.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|+....+ +.||||.++..........+.+|+.++++++|||||++++++.+++..++||||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (303)
T cd07869 10 LEKLGEGSYATVYKGKSKVNG-----KLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEY 84 (303)
T ss_pred eeeEEecCCEEEEEEEECCCC-----CEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEEC
Confidence 357999999999999987655 799999997653333335688999999999999999999999999999999999
Q ss_pred ccCCcHHHHH--------------------------hccc--ccccCCCCccccccCeEEecCCCccc-----------c
Q 007935 427 IRNGSLYAAL--------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSRI-----------S 467 (584)
Q Consensus 427 ~~~GsL~~~L--------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~-----------~ 467 (584)
++ |+|.+++ |+.| |+++++.|+.+..++.++..++|... .
T Consensus 85 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 163 (303)
T cd07869 85 VH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSNE 163 (303)
T ss_pred CC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCCccCCCC
Confidence 96 5665444 3333 57778888777777777777776421 3
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcC--CCCc-----cccC---
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER--RPLS-----EVID--- 537 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~--~~~~-----~~~d--- 537 (584)
.||..|+|||++.....++.++||||+||++|||+||+.||.+.......+...... .... .... ...+
T Consensus 164 ~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 242 (303)
T cd07869 164 VVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLV-LGTPNEDTWPGVHSLPHFKPER 242 (303)
T ss_pred cccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHH-hCCCChhhccchhhcccccccc
Confidence 568889999986554568999999999999999999999997532211111111110 0000 0000 0000
Q ss_pred ------hhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 538 ------PALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 538 ------~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
..+............+.+++.+|++.||++|||+.|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 243 FTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred ccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 011100000011235668899999999999999999985
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=234.74 Aligned_cols=209 Identities=24% Similarity=0.353 Sum_probs=158.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|...+.+ +.||+|.+.... ...++|.+|++++++++||||+++++++..++..++||||
T Consensus 11 ~~~ig~g~~~~v~~~~~~~~~-----~~~~~K~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (263)
T cd05052 11 KHKLGGGQYGEVYEGVWKKYS-----LTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 83 (263)
T ss_pred eeecCCcccceEEEEEEecCC-----ceEEEEEecCCc--hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEe
Confidence 467999999999999987755 799999987542 2347899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc---------------------------c--cccccCCCCccccccCeEEecCCCcccc----------
Q 007935 427 IRNGSLYAALHG---------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRIS---------- 467 (584)
Q Consensus 427 ~~~GsL~~~L~~---------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~~---------- 467 (584)
+++|+|.+++.. . -|+++.+.|+.+..+..++..+++....
T Consensus 84 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~ 163 (263)
T cd05052 84 MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 163 (263)
T ss_pred CCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccceeeccC
Confidence 999999777642 2 2566777777776667777777653221
Q ss_pred --cCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhc-CCCCccccChhhhhh
Q 007935 468 --AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRE-RRPLSEVIDPALVKE 543 (584)
Q Consensus 468 --~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~d~~~~~~ 543 (584)
.++..|+|||++. +..++.++|||||||++|||+| |..||.+. ...+........ ....+..++
T Consensus 164 ~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~il~el~t~g~~p~~~~-----~~~~~~~~~~~~~~~~~~~~~~------ 231 (263)
T cd05052 164 GAKFPIKWTAPESLA-YNKFSIKSDVWAFGVLLWEIATYGMSPYPGI-----DLSQVYELLEKGYRMERPEGCP------ 231 (263)
T ss_pred CCCCccccCCHHHhc-cCCCCchhHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHHHCCCCCCCCCCCC------
Confidence 2345799999854 4688999999999999999998 99998642 222332222221 111112222
Q ss_pred hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhh
Q 007935 544 IHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581 (584)
Q Consensus 544 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 581 (584)
..+.+++.+||+.+|++|||+.+++++|+++
T Consensus 232 -------~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 232 -------PKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred -------HHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 2455688889999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.9e-28 Score=244.91 Aligned_cols=208 Identities=20% Similarity=0.280 Sum_probs=156.6
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC---cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD---ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~---~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
+.||+|+||.||+++...+. ...+.||||.++... .......+.+|++++++++||||+++++++.+++..++||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~--~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 79 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGA--DTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLIL 79 (323)
T ss_pred ceeeecCCeEEEEEEEcccC--CCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEE
Confidence 46999999999999875432 122789999997531 2222356789999999999999999999999999999999
Q ss_pred ecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCcc-----------c
Q 007935 425 DFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR-----------I 466 (584)
Q Consensus 425 Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~-----------~ 466 (584)
||+++|+|.++++ +. -|+++++.|+.+..++.++..++|.. .
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 159 (323)
T cd05584 80 EYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHT 159 (323)
T ss_pred eCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCcccc
Confidence 9999999976653 33 35777778877777777777777632 1
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhH
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 546 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 546 (584)
..||..|+|||++.. ..++.++|||||||++|||++|+.||.... ..............++..+++.+
T Consensus 160 ~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~G~~pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~~------ 227 (323)
T cd05584 160 FCGTIEYMAPEILMR-SGHGKAVDWWSLGALMYDMLTGAPPFTAEN-----RKKTIDKILKGKLNLPPYLTPEA------ 227 (323)
T ss_pred cCCCccccChhhccC-CCCCCcceecccHHHHHHHhcCCCCCCCCC-----HHHHHHHHHcCCCCCCCCCCHHH------
Confidence 358899999999554 678999999999999999999999997522 23333444444433444444433
Q ss_pred HHHHHHHHHHHhcccCCCCCCCC-----ChHHHHH
Q 007935 547 KRQVLATFHIALNCTELDPEFRP-----RMRTVSE 576 (584)
Q Consensus 547 ~~~~~~~~~l~~~Cl~~~P~~RP-----t~~ev~~ 576 (584)
.+++.+||+.||++|| ++.++++
T Consensus 228 -------~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 228 -------RDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred -------HHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 4577779999999999 7777754
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.6e-28 Score=245.71 Aligned_cols=204 Identities=16% Similarity=0.239 Sum_probs=155.7
Q ss_pred eceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEeee
Q 007935 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 349 ~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
+||+|+||.||+|+...++ +.||||.++... .....+.+..|.+++..+ +||||+++++++.+++..++|||
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E 76 (321)
T cd05591 2 VLGKGSFGKVMLAELKGTD-----EVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVME 76 (321)
T ss_pred ccccCCCeEEEEEEECCCC-----CEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEe
Confidence 6999999999999987765 799999997641 223346688899999876 89999999999999999999999
Q ss_pred cccCCcHHHHH-------------------------hccc--ccccCCCCccccccCeEEecCCCccc-----------c
Q 007935 426 FIRNGSLYAAL-------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSRI-----------S 467 (584)
Q Consensus 426 y~~~GsL~~~L-------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~-----------~ 467 (584)
|+++|+|..++ |+.| |+++.+.|+.+..++.++..++|... .
T Consensus 77 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~ 156 (321)
T cd05591 77 YVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTF 156 (321)
T ss_pred CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCCcccccc
Confidence 99999996544 4333 57778888877777777777776322 3
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHH
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAK 547 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 547 (584)
.||..|+|||++. +..++.++|||||||++|||+||+.||.... ...............+..+++.
T Consensus 157 ~gt~~y~aPE~~~-~~~~~~~~DvwslG~il~el~tg~~Pf~~~~-----~~~~~~~i~~~~~~~p~~~~~~-------- 222 (321)
T cd05591 157 CGTPDYIAPEILQ-ELEYGPSVDWWALGVLMYEMMAGQPPFEADN-----EDDLFESILHDDVLYPVWLSKE-------- 222 (321)
T ss_pred ccCccccCHHHHc-CCCCCCccceechhHHHHHHhcCCCCCCCCC-----HHHHHHHHHcCCCCCCCCCCHH--------
Confidence 5889999999854 4688999999999999999999999997432 2333444443333333333333
Q ss_pred HHHHHHHHHHhcccCCCCCCCC-------ChHHHHH
Q 007935 548 RQVLATFHIALNCTELDPEFRP-------RMRTVSE 576 (584)
Q Consensus 548 ~~~~~~~~l~~~Cl~~~P~~RP-------t~~ev~~ 576 (584)
+.+++..|++.||++|| ++.++++
T Consensus 223 -----~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05591 223 -----AVSILKAFMTKNPNKRLGCVASQGGEDAIKQ 253 (321)
T ss_pred -----HHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence 34577779999999999 6777653
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.4e-28 Score=245.07 Aligned_cols=205 Identities=15% Similarity=0.253 Sum_probs=153.0
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCC--CcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG--DATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
++||+|+||.||+|+...++ +.||+|.++.. ......+.+.+|+.++.++ +|||||++++++.+++..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 75 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTE-----RIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVI 75 (329)
T ss_pred CeeeeCCCeEEEEEEECCCC-----CEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEE
Confidence 36999999999999988765 79999999864 2223346688999998887 8999999999999999999999
Q ss_pred ecccCCcHHHHH-------------------------hcc--cccccCCCCccccccCeEEecCCCcc-----------c
Q 007935 425 DFIRNGSLYAAL-------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSR-----------I 466 (584)
Q Consensus 425 Ey~~~GsL~~~L-------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~-----------~ 466 (584)
||+++|+|..++ |.. -|+++++.|+.+..++.++..++|.. .
T Consensus 76 E~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~ 155 (329)
T cd05618 76 EYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTST 155 (329)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCcccc
Confidence 999999996554 333 36778888888877777777777632 2
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCC---CCcHHHHH-HHHhhcCCCCccccChhhhh
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEND---GKGLESLV-RKAFRERRPLSEVIDPALVK 542 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~---~~~l~~~~-~~~~~~~~~~~~~~d~~~~~ 542 (584)
..||..|+|||++. +..++.++|||||||++|||+||+.||...... ......+. .........++..+++
T Consensus 156 ~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~---- 230 (329)
T cd05618 156 FCGTPNYIAPEILR-GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSV---- 230 (329)
T ss_pred ccCCccccCHHHHc-CCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCCCCCCH----
Confidence 35889999999955 468899999999999999999999999632111 11122222 2222222223333333
Q ss_pred hhhHHHHHHHHHHHHhcccCCCCCCCCCh
Q 007935 543 EIHAKRQVLATFHIALNCTELDPEFRPRM 571 (584)
Q Consensus 543 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~ 571 (584)
.+.+++.+||+.||++||++
T Consensus 231 ---------~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 231 ---------KAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred ---------HHHHHHHHHhcCCHHHcCCC
Confidence 33457777999999999984
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.5e-28 Score=241.91 Aligned_cols=222 Identities=17% Similarity=0.206 Sum_probs=155.4
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|+...++ +.||||+++... .....+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~-----~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 6 LGVVGEGAYGVVLKCRHKETK-----EIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred EEEecccCCEEEEEEEECCCC-----cEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 457999999999999998765 789999997652 22334678899999999999999999999999999999999
Q ss_pred cccCCcHH-------------------------HHHhccc--ccccCCCCccccccCeEEecCCCccc------------
Q 007935 426 FIRNGSLY-------------------------AALHGFG--LNRLLPGTSKVTKNETIVTSGTGSRI------------ 466 (584)
Q Consensus 426 y~~~GsL~-------------------------~~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~------------ 466 (584)
|++++.+. .|||+.| |+++.+.|+.+..++.++..++|...
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 160 (287)
T cd07848 81 YVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTE 160 (287)
T ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccccccccc
Confidence 99988663 3334433 56677777777766777776665321
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhh-----------cCCCCccc
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR-----------ERRPLSEV 535 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~-----------~~~~~~~~ 535 (584)
..||..|+|||++.. ..++.++|||||||++|||++|+.||....... .+... ..... ........
T Consensus 161 ~~~~~~y~aPE~~~~-~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 237 (287)
T cd07848 161 YVATRWYRSPELLLG-APYGKAVDMWSVGCILGELSDGQPLFPGESEID-QLFTI-QKVLGPLPAEQMKLFYSNPRFHGL 237 (287)
T ss_pred cccccccCCcHHHcC-CCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHH-HHHHH-HHhhCCCCHHHHHhhhccchhccc
Confidence 357889999999654 678999999999999999999999997532211 11110 00000 00000000
Q ss_pred cChhhhh-----hhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 536 IDPALVK-----EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 536 ~d~~~~~-----~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
..+.... ..........+.+++.+||+.||++|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 238 RFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred ccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0000000 0000012235788999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.5e-28 Score=244.80 Aligned_cols=199 Identities=16% Similarity=0.220 Sum_probs=153.5
Q ss_pred eceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEeee
Q 007935 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 349 ~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
+||+|+||.||+|+...++ +.||||.++... .....+.+.+|..++..+ +||||+++++++.+.+..++|||
T Consensus 2 ~lg~G~~g~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~E 76 (320)
T cd05590 2 VLGKGSFGKVMLARLKESG-----RLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVME 76 (320)
T ss_pred eeeeCCCeEEEEEEEcCCC-----CEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEc
Confidence 6999999999999987765 799999997541 223346788899999887 79999999999999999999999
Q ss_pred cccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCcc-----------cc
Q 007935 426 FIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR-----------IS 467 (584)
Q Consensus 426 y~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~ 467 (584)
|+++|+|.++++ +. -|+++++.|+.+..++.++..++|.. ..
T Consensus 77 y~~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~ 156 (320)
T cd05590 77 FVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTF 156 (320)
T ss_pred CCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCccccc
Confidence 999999976553 33 35777888887777777777777632 23
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHH
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAK 547 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 547 (584)
.||+.|||||++. +..++.++|||||||++|||++|+.||... ....+...........+..+++.
T Consensus 157 ~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~el~~g~~Pf~~~-----~~~~~~~~i~~~~~~~~~~~~~~-------- 222 (320)
T cd05590 157 CGTPDYIAPEILQ-EMLYGPSVDWWAMGVLLYEMLCGHAPFEAE-----NEDDLFEAILNDEVVYPTWLSQD-------- 222 (320)
T ss_pred ccCccccCHHHHc-CCCCCCccchhhhHHHHHHHhhCCCCCCCC-----CHHHHHHHHhcCCCCCCCCCCHH--------
Confidence 5899999999854 467899999999999999999999999742 22333344443333333334433
Q ss_pred HHHHHHHHHHhcccCCCCCCCCCh
Q 007935 548 RQVLATFHIALNCTELDPEFRPRM 571 (584)
Q Consensus 548 ~~~~~~~~l~~~Cl~~~P~~RPt~ 571 (584)
+.+++.+|++.||++||++
T Consensus 223 -----~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 223 -----AVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred -----HHHHHHHHcccCHHHCCCC
Confidence 3456777999999999998
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.9e-28 Score=219.71 Aligned_cols=220 Identities=16% Similarity=0.257 Sum_probs=163.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchh-hHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWR-FKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~-~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+++|+|.||.||+|+...++ +.||||+++.....+. .....|||+.|+.++|+|||.++++|-..+...||+|
T Consensus 7 ~~~lGEG~~gvVyka~d~~t~-----~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 7 LEKLGEGTYGVVYKARDTETG-----KRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred hhhhcCcceEEEEEEEecCCC-----cEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 457999999999999988877 8999999987733322 2567899999999999999999999999999999999
Q ss_pred cccCCcHHHHH--------------------------hcc--cccccCCCCccccccCeEEecCCCcccc----------
Q 007935 426 FIRNGSLYAAL--------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSRIS---------- 467 (584)
Q Consensus 426 y~~~GsL~~~L--------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~~---------- 467 (584)
||+. +|...+ |.. -|+|+++.|..|..++.++..|||....
T Consensus 82 fm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~~ 160 (318)
T KOG0659|consen 82 FMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQTH 160 (318)
T ss_pred eccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCccccc
Confidence 9986 775444 333 3789999999999999999988875443
Q ss_pred -cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH--Hhh--cCCCCcccc---C--
Q 007935 468 -AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRK--AFR--ERRPLSEVI---D-- 537 (584)
Q Consensus 468 -~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~--~~~--~~~~~~~~~---d-- 537 (584)
+.|.+|.|||.+...+.|+..+||||.||++.||+-|.+-|.+. .++.++..- .+. ....+++.. |
T Consensus 161 ~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~----sDidQL~~If~~LGTP~~~~WP~~~~lpdY~ 236 (318)
T KOG0659|consen 161 QVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGD----SDIDQLSKIFRALGTPTPDQWPEMTSLPDYV 236 (318)
T ss_pred ceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCC----chHHHHHHHHHHcCCCCcccCccccccccHH
Confidence 45788999999887789999999999999999999988666542 223322211 111 111111110 0
Q ss_pred ------hhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHH
Q 007935 538 ------PALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSES 577 (584)
Q Consensus 538 ------~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 577 (584)
+.....+. ..+....++++..++..||.+|+|+.|++++
T Consensus 237 ~~~~~P~~~~~~lf-~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 237 KIQQFPKPPLNNLF-PAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred HHhcCCCCcccccc-ccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 00000000 1133456899999999999999999999864
|
|
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.1e-27 Score=232.38 Aligned_cols=214 Identities=26% Similarity=0.374 Sum_probs=159.4
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|.+...+. ....||||.++........++|.+|+.++++++||||+++++++.+.+..++||||
T Consensus 9 ~~~lg~g~~g~vy~~~~~~~~~--~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~ 86 (266)
T cd05033 9 EKVIGGGEFGEVCRGRLKLPGK--KEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITEY 86 (266)
T ss_pred eeEecCCccceEEEEEEccCCC--CcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEEEEc
Confidence 4679999999999999865421 12689999998665444557899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc------------
Q 007935 427 IRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI------------ 466 (584)
Q Consensus 427 ~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~------------ 466 (584)
+++|+|.++++. . .|+++.+.|+.+..+...+..+++...
T Consensus 87 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 166 (266)
T cd05033 87 MENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTK 166 (266)
T ss_pred CCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhcccccccceecc
Confidence 999999777643 2 345667777777666666666665322
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC-CCCccccChhhhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER-RPLSEVIDPALVKE 543 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~d~~~~~~ 543 (584)
..++..|+|||.+.. ..++.++||||||+++|||++ |..||.... ............ .+.+...
T Consensus 167 ~~~~~~~y~~Pe~~~~-~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~------- 233 (266)
T cd05033 167 GGKIPIRWTAPEAIAY-RKFTSASDVWSFGIVMWEVMSYGERPYWDMS-----NQDVIKAVEDGYRLPPPMDC------- 233 (266)
T ss_pred CCCCCccccChhhhcc-CCCccccchHHHHHHHHHHHccCCCCCCCCC-----HHHHHHHHHcCCCCCCCCCC-------
Confidence 123467999998544 678999999999999999998 999986422 122222222111 1111111
Q ss_pred hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhh
Q 007935 544 IHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581 (584)
Q Consensus 544 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 581 (584)
...+.+++.+||+.+|++||++.||++.|+++
T Consensus 234 ------~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 234 ------PSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred ------CHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 12456788899999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-27 Score=235.44 Aligned_cols=216 Identities=17% Similarity=0.238 Sum_probs=159.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC--CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG--DATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|+...++ +.||||.++.. ......+.|.+|++++++++||||+++++++.+.+..++||
T Consensus 7 ~~~l~~g~~~~v~~~~~~~~~-----~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 7 EKKIGRGQFSEVYRATCLLDR-----KPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred eeeeccCCCeeEEEEEEeCCC-----CEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 357999999999999987665 79999988643 22333467899999999999999999999999999999999
Q ss_pred ecccCCcHHHHHh-----------------------------ccc--ccccCCCCccccccCeEEecCCCcc--------
Q 007935 425 DFIRNGSLYAALH-----------------------------GFG--LNRLLPGTSKVTKNETIVTSGTGSR-------- 465 (584)
Q Consensus 425 Ey~~~GsL~~~L~-----------------------------~~g--~~~~~~~~~~i~~~~~~~~~~~~~~-------- 465 (584)
||+++|+|.+++. +.| |.++.++|+.+..+..+...+++..
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~ 161 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 161 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchhH
Confidence 9999999976552 222 4556666666666666666666532
Q ss_pred ---cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhh
Q 007935 466 ---ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVK 542 (584)
Q Consensus 466 ---~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~ 542 (584)
...|+..|+|||.+.. ..++.++|||||||++|||+||+.||..... ....+......... +....
T Consensus 162 ~~~~~~~~~~~~aPE~~~~-~~~~~~~Di~slG~~l~el~~g~~p~~~~~~---~~~~~~~~~~~~~~--~~~~~----- 230 (267)
T cd08228 162 AAHSLVGTPYYMSPERIHE-NGYNFKSDIWSLGCLLYEMAALQSPFYGDKM---NLFSLCQKIEQCDY--PPLPT----- 230 (267)
T ss_pred HHhcCCCCccccChhhhcc-CCCCchhhHHHHHHHHHHHhcCCCCCccccc---cHHHHHHHHhcCCC--CCCCh-----
Confidence 1357788999998554 6789999999999999999999999864322 22333322221111 11110
Q ss_pred hhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 543 EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 543 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
......+.+++.+||+.+|++||++.||++.|++++
T Consensus 231 ----~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 231 ----EHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred ----hhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 011234567888899999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.4e-28 Score=245.84 Aligned_cols=213 Identities=15% Similarity=0.163 Sum_probs=159.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|+....+ +.||||+++... .....+.+.+|++++.+++|||||++++++.+.+..++||
T Consensus 6 ~~~ig~G~~g~Vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 6 LTQVGQGGYGQVFLAKKKDTG-----EIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred EEEEeecCCeEEEEEEECCCC-----CEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 457999999999999988765 799999997642 2223467899999999999999999999999999999999
Q ss_pred ecccCCcHHHHHhc-------------------------c--cccccCCCCccccccCeEEecCCCccc--------ccC
Q 007935 425 DFIRNGSLYAALHG-------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI--------SAI 469 (584)
Q Consensus 425 Ey~~~GsL~~~L~~-------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~--------~~g 469 (584)
||+++|+|.++++. . -|+++.+.|+.+..++.++..++|... ..|
T Consensus 81 e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~~~~g 160 (333)
T cd05600 81 EYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANSVVG 160 (333)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCcccccccCCccc
Confidence 99999999777642 2 357777788777777777777776432 468
Q ss_pred CCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC--CccccChhhhhhhhHH
Q 007935 470 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP--LSEVIDPALVKEIHAK 547 (584)
Q Consensus 470 t~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~ 547 (584)
|+.|+|||++.. ..++.++|||||||++|||++|+.||.... ..+........... .+...++. .
T Consensus 161 t~~y~aPE~~~~-~~~~~~~DvwslG~il~ell~g~~pf~~~~-----~~~~~~~i~~~~~~~~~~~~~~~~-------~ 227 (333)
T cd05600 161 SPDYMAPEVLRG-KGYDFTVDYWSLGCMLYEFLCGFPPFSGST-----PNETWENLKYWKETLQRPVYDDPR-------F 227 (333)
T ss_pred CccccChhHhcC-CCCCCccceecchHHHhhhhhCCCCCCCCC-----HHHHHHHHHhccccccCCCCCccc-------c
Confidence 999999999554 689999999999999999999999997532 22222222111110 01111111 0
Q ss_pred HHHHHHHHHHhcccCCCCCCCCChHHHHHH
Q 007935 548 RQVLATFHIALNCTELDPEFRPRMRTVSES 577 (584)
Q Consensus 548 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 577 (584)
....++.+++.+||..+|++||++.|+++.
T Consensus 228 ~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 228 NLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred ccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 112245667888999999999999999853
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.7e-28 Score=244.00 Aligned_cols=159 Identities=20% Similarity=0.332 Sum_probs=131.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||++....++ ..||+|.+.........+.|.+|++++++++|||||+++++|.+++..++||||
T Consensus 10 ~~~lg~g~~g~V~~~~~~~~~-----~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (333)
T cd06650 10 ISELGAGNGGVVFKVSHKPSG-----LIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 84 (333)
T ss_pred eccccCCCCEEEEEEEECCCC-----cEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEec
Confidence 457999999999999988765 789999987653434447799999999999999999999999999999999999
Q ss_pred ccCCcHHHHHh-------------------------c---ccccccCCCCccccccCeEEecCCCcc---------cccC
Q 007935 427 IRNGSLYAALH-------------------------G---FGLNRLLPGTSKVTKNETIVTSGTGSR---------ISAI 469 (584)
Q Consensus 427 ~~~GsL~~~L~-------------------------~---~g~~~~~~~~~~i~~~~~~~~~~~~~~---------~~~g 469 (584)
+++|+|.++++ + .-|++++++|+.+..++.++..++|.. ...|
T Consensus 85 ~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~ 164 (333)
T cd06650 85 MDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG 164 (333)
T ss_pred CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhccccCCC
Confidence 99999976653 2 125677777777766676777777633 2358
Q ss_pred CCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCC
Q 007935 470 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGP 511 (584)
Q Consensus 470 t~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~ 511 (584)
|..|+|||++. +..++.++|||||||++|||++|+.||...
T Consensus 165 ~~~y~aPE~~~-~~~~~~~~DvwslG~il~~l~~g~~p~~~~ 205 (333)
T cd06650 165 TRSYMSPERLQ-GTHYSVQSDIWSMGLSLVEMAIGRYPIPPP 205 (333)
T ss_pred CccccCHHHhc-CCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 88999999954 467899999999999999999999999753
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-27 Score=234.93 Aligned_cols=215 Identities=21% Similarity=0.315 Sum_probs=158.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|.............||||++..........+|.+|+.++++++||||+++++++.+++..++||||
T Consensus 11 ~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~e~ 90 (277)
T cd05062 11 SRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMEL 90 (277)
T ss_pred eeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeEEEEec
Confidence 46799999999999987543222233789999987644334456799999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc-------------------------------------ccccccCCCCccccccCeEEecCCCccc---
Q 007935 427 IRNGSLYAALHG-------------------------------------FGLNRLLPGTSKVTKNETIVTSGTGSRI--- 466 (584)
Q Consensus 427 ~~~GsL~~~L~~-------------------------------------~g~~~~~~~~~~i~~~~~~~~~~~~~~~--- 466 (584)
+++|+|.++++. .-|.++.+.|+.+..+..++..+++...
T Consensus 91 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~ 170 (277)
T cd05062 91 MTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 170 (277)
T ss_pred CCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEECCCCCccccC
Confidence 999999877753 1245666677767666667777766421
Q ss_pred ----------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC-CCCcc
Q 007935 467 ----------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER-RPLSE 534 (584)
Q Consensus 467 ----------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~ 534 (584)
..++..|||||++.. ..++.++|||||||++|||++ |..||.+.. ............ ...+.
T Consensus 171 ~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~~~~p~~~~~-----~~~~~~~~~~~~~~~~~~ 244 (277)
T cd05062 171 ETDYYRKGGKGLLPVRWMSPESLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGMS-----NEQVLRFVMEGGLLDKPD 244 (277)
T ss_pred CcceeecCCCCccCHhhcChhHhhc-CCcCchhHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHHHcCCcCCCCC
Confidence 133567999999554 678999999999999999999 788886432 222222222211 11111
Q ss_pred ccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHh
Q 007935 535 VIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580 (584)
Q Consensus 535 ~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 580 (584)
... ..+.+++.+||+.+|++|||+.|++++|++
T Consensus 245 ~~~-------------~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 245 NCP-------------DMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred CCC-------------HHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 111 245668888999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-27 Score=236.81 Aligned_cols=217 Identities=26% Similarity=0.375 Sum_probs=160.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|+.....+......||+|.+.........+++.+|+.++++++|||||++++.|..++..++||||
T Consensus 5 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (290)
T cd05045 5 GKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEY 84 (290)
T ss_pred cccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEEEEe
Confidence 35799999999999987654333334689999987654444457899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc-------------------------------------------------c--cccccCCCCccccccC
Q 007935 427 IRNGSLYAALHG-------------------------------------------------F--GLNRLLPGTSKVTKNE 455 (584)
Q Consensus 427 ~~~GsL~~~L~~-------------------------------------------------~--g~~~~~~~~~~i~~~~ 455 (584)
+++|+|.+++.. . -|+++.+.|+.+..+.
T Consensus 85 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill~~~~ 164 (290)
T cd05045 85 AKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGR 164 (290)
T ss_pred cCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEEcCCC
Confidence 999999877642 1 2466666777666666
Q ss_pred eEEecCCCccc-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHH
Q 007935 456 TIVTSGTGSRI-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESL 521 (584)
Q Consensus 456 ~~~~~~~~~~~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~ 521 (584)
.++..++|... ..++..|+|||+... ..++.++||||||+++|||+| |+.||.+.. ...+
T Consensus 165 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~-----~~~~ 238 (290)
T cd05045 165 KMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFD-HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIA-----PERL 238 (290)
T ss_pred cEEeccccccccccCccchhcccCCCCCccccCHHHHcc-CCcchHhHHHHHHHHHHHHHhcCCCCCCCCC-----HHHH
Confidence 66666665321 134567999998544 678999999999999999999 999986422 2222
Q ss_pred HHHHhhc-CCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 522 VRKAFRE-RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 522 ~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
....... ..+.+..++ ..+.+++.+||+.+|++||++.|+++.|+++-
T Consensus 239 ~~~~~~~~~~~~~~~~~-------------~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~ 287 (290)
T cd05045 239 FNLLKTGYRMERPENCS-------------EEMYNLMLTCWKQEPDKRPTFADISKELEKMM 287 (290)
T ss_pred HHHHhCCCCCCCCCCCC-------------HHHHHHHHHHccCCcccCCCHHHHHHHHHHHH
Confidence 2221111 111111111 24566888899999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=254.08 Aligned_cols=207 Identities=19% Similarity=0.269 Sum_probs=157.0
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
..+.||+|++|.||+|....... ..||+|.+.... ......+.+|+.++++++|||||++++++.+++..++|||
T Consensus 71 ~~~~lg~G~~g~vy~a~~~~~~~----~~vv~K~~~~~~-~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E 145 (478)
T PTZ00267 71 LTTLVGRNPTTAAFVATRGSDPK----EKVVAKFVMLND-ERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIME 145 (478)
T ss_pred EEEEEEeCCCcEEEEEEEcCCCC----eEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEE
Confidence 35689999999999998766511 678888775532 2333678889999999999999999999999999999999
Q ss_pred cccCCcHHHHHhc-----------------------------c--cccccCCCCccccccCeEEecCCCccc--------
Q 007935 426 FIRNGSLYAALHG-----------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI-------- 466 (584)
Q Consensus 426 y~~~GsL~~~L~~-----------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~-------- 466 (584)
|+++|+|.++|+. . -|+++++.|+.+..++.++..+||...
T Consensus 146 ~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~ 225 (478)
T PTZ00267 146 YGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSL 225 (478)
T ss_pred CCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCcccc
Confidence 9999999766532 2 367888888888777777777765321
Q ss_pred -----ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC-CCccccChhh
Q 007935 467 -----SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR-PLSEVIDPAL 540 (584)
Q Consensus 467 -----~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~d~~~ 540 (584)
..||+.|||||++.. ..++.++|||||||++|||+||+.||... .............. +.+..+++
T Consensus 226 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~Pf~~~-----~~~~~~~~~~~~~~~~~~~~~s~-- 297 (478)
T PTZ00267 226 DVASSFCGTPYYLAPELWER-KRYSKKADMWSLGVILYELLTLHRPFKGP-----SQREIMQQVLYGKYDPFPCPVSS-- 297 (478)
T ss_pred ccccccCCCccccCHhHhCC-CCCCcHHhHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHhCCCCCCCccCCH--
Confidence 248999999998544 68999999999999999999999999742 22333333332221 22222333
Q ss_pred hhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 541 VKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 541 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||+.||++||++.+++.
T Consensus 298 -----------~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 298 -----------GMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred -----------HHHHHHHHHhccChhhCcCHHHHHh
Confidence 3455777799999999999999874
|
|
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.3e-28 Score=244.23 Aligned_cols=209 Identities=16% Similarity=0.264 Sum_probs=155.4
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
++||+|+||.||+++....+ +.||||.++... .....+.+.+|+.++.++ +|||||++++++.+.+..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~-----~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~ 75 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTR-----RIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVI 75 (329)
T ss_pred CeEeeCCCeEEEEEEECCCC-----CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEE
Confidence 36999999999999987765 899999998642 223346688999999999 7999999999999999999999
Q ss_pred ecccCCcHHHHH-------------------------hccc--ccccCCCCccccccCeEEecCCCcc-----------c
Q 007935 425 DFIRNGSLYAAL-------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSR-----------I 466 (584)
Q Consensus 425 Ey~~~GsL~~~L-------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~-----------~ 466 (584)
||+++|+|.+++ |..| |++++++|+.+..++.++..++|.. .
T Consensus 76 e~~~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~ 155 (329)
T cd05588 76 EFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTST 155 (329)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccCCCcccc
Confidence 999999996555 3333 5777778877777777777777632 2
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCC---CCcHHHHHHH-HhhcCCCCccccChhhhh
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEND---GKGLESLVRK-AFRERRPLSEVIDPALVK 542 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~---~~~l~~~~~~-~~~~~~~~~~~~d~~~~~ 542 (584)
..||..|+|||++. +..++.++|||||||++|||+||+.||+..... ......+... .......++..+++.
T Consensus 156 ~~gt~~y~aPE~~~-~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~--- 231 (329)
T cd05588 156 FCGTPNYIAPEILR-GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRSLSVK--- 231 (329)
T ss_pred ccCCccccCHHHHc-CCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCCCCCCHH---
Confidence 35889999999955 468899999999999999999999999642211 1112222222 222222333333333
Q ss_pred hhhHHHHHHHHHHHHhcccCCCCCCCCC------hHHHH
Q 007935 543 EIHAKRQVLATFHIALNCTELDPEFRPR------MRTVS 575 (584)
Q Consensus 543 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt------~~ev~ 575 (584)
+.+++.+|++.||.+||+ +.+++
T Consensus 232 ----------~~~li~~~L~~dP~~R~~~~~~~~~~~i~ 260 (329)
T cd05588 232 ----------ASSVLKGFLNKDPKERLGCHPQTGFRDIK 260 (329)
T ss_pred ----------HHHHHHHHhccCHHHcCCCCCCCCHHHHh
Confidence 345777799999999998 55665
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=238.51 Aligned_cols=222 Identities=15% Similarity=0.176 Sum_probs=156.1
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|....++ ..||+|.++..........+.+|++++++++||||+++++++.+++..++||||
T Consensus 10 ~~~lg~G~~g~Vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 10 LDKLGEGTYATVFKGRSKLTE-----NLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred eeEEecCCCEEEEEEEECCCC-----CEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 457999999999999987765 799999997653333346788999999999999999999999999999999999
Q ss_pred ccCCcHHHHH--------------------------hcc--cccccCCCCccccccCeEEecCCCcc-----------cc
Q 007935 427 IRNGSLYAAL--------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSR-----------IS 467 (584)
Q Consensus 427 ~~~GsL~~~L--------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~ 467 (584)
+++ +|.+++ |+. -|++++++|+.+..++.++..++|.. ..
T Consensus 85 ~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~~~~ 163 (288)
T cd07871 85 LDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNE 163 (288)
T ss_pred CCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCccccCc
Confidence 985 776555 333 35777778877777777777777643 13
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC--CCccccC--------
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR--PLSEVID-------- 537 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~d-------- 537 (584)
.++..|+|||++..+..++.++||||+||++|||+||+.||.+..... .+... ........ ..+...+
T Consensus 164 ~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (288)
T cd07871 164 VVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKE-ELHLI-FRLLGTPTEETWPGITSNEEFRSYL 241 (288)
T ss_pred eecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHH-HHHhCCCChHHhhccccchhhhccc
Confidence 568889999986655678999999999999999999999997532211 11111 11111000 0000000
Q ss_pred -hhhh--hhhh-HHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 538 -PALV--KEIH-AKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 538 -~~~~--~~~~-~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+... .... ......+..+++.+|++.||.+|||++|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 242 FPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred cCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0000 0000 0001235678999999999999999999975
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.5e-27 Score=236.34 Aligned_cols=216 Identities=23% Similarity=0.329 Sum_probs=160.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|+............|++|.++... ....+.|.+|++++++++||||+++++++.+.+..++||||
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 88 (291)
T cd05094 10 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT-LAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEY 88 (291)
T ss_pred eeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc-HHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEEEec
Confidence 35799999999999987654333334679999987643 23346799999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcc-------------------------------------------cccccCCCCccccccCeEEecCCC
Q 007935 427 IRNGSLYAALHGF-------------------------------------------GLNRLLPGTSKVTKNETIVTSGTG 463 (584)
Q Consensus 427 ~~~GsL~~~L~~~-------------------------------------------g~~~~~~~~~~i~~~~~~~~~~~~ 463 (584)
+++|+|.++++.. -|+++.+.|+.+..+..++..+++
T Consensus 89 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~l~dfg 168 (291)
T cd05094 89 MKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFG 168 (291)
T ss_pred CCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEECCCC
Confidence 9999998887431 245566677666666666666665
Q ss_pred ccc-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC
Q 007935 464 SRI-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER 529 (584)
Q Consensus 464 ~~~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~ 529 (584)
... ..++..|+|||++. +..++.++|||||||++|||+| |+.||..... ...........
T Consensus 169 ~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~-----~~~~~~~~~~~ 242 (291)
T cd05094 169 MSRDVYSTDYYRVGGHTMLPIRWMPPESIM-YRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN-----TEVIECITQGR 242 (291)
T ss_pred cccccCCCceeecCCCCCcceeecChHHhc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHhCCC
Confidence 321 23466799999854 4688999999999999999999 9999864321 22222222211
Q ss_pred CC-CccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 530 RP-LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 530 ~~-~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.. ..... ...+.+++.+||+.+|++|||+.+|+++|+++.
T Consensus 243 ~~~~~~~~-------------~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~ 283 (291)
T cd05094 243 VLERPRVC-------------PKEVYDIMLGCWQREPQQRLNIKEIYKILHALG 283 (291)
T ss_pred CCCCCccC-------------CHHHHHHHHHHcccChhhCcCHHHHHHHHHHHH
Confidence 11 11111 224567888899999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.3e-27 Score=235.04 Aligned_cols=216 Identities=21% Similarity=0.335 Sum_probs=159.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||++.............+|+|.+.... ....+.|.+|++++++++||||+++++++...+..++||||
T Consensus 10 ~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 88 (288)
T cd05093 10 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-DNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEY 88 (288)
T ss_pred ccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEc
Confidence 46799999999999986543222233679999987643 33347899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc--------------------------------------c--cccccCCCCccccccCeEEecCCCccc
Q 007935 427 IRNGSLYAALHG--------------------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI 466 (584)
Q Consensus 427 ~~~GsL~~~L~~--------------------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~ 466 (584)
+++|+|.++++. . -|+++.+.|+.+..+..++..+++...
T Consensus 89 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~ 168 (288)
T cd05093 89 MKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSR 168 (288)
T ss_pred CCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEeccCCccc
Confidence 999999877642 1 246666777766666666666665332
Q ss_pred -------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC-CC
Q 007935 467 -------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER-RP 531 (584)
Q Consensus 467 -------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~-~~ 531 (584)
..++..|+|||++. +..++.++|||||||++|||+| |+.||..... ........... ..
T Consensus 169 ~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~-----~~~~~~i~~~~~~~ 242 (288)
T cd05093 169 DVYSTDYYRVGGHTMLPIRWMPPESIM-YRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN-----NEVIECITQGRVLQ 242 (288)
T ss_pred cccCCceeecCCCCCccccccCHHHhc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHHcCCcCC
Confidence 12356799999854 4678999999999999999999 8999864321 22222222221 11
Q ss_pred CccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 532 ~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.....++ .+.+++.+||+.||.+|||+.|+.+.|+++.
T Consensus 243 ~~~~~~~-------------~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~ 280 (288)
T cd05093 243 RPRTCPK-------------EVYDLMLGCWQREPHMRLNIKEIHSLLQNLA 280 (288)
T ss_pred CCCCCCH-------------HHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence 1122222 3566888899999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.5e-28 Score=246.28 Aligned_cols=204 Identities=20% Similarity=0.271 Sum_probs=158.3
Q ss_pred eceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 349 ~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
+||+|+||.||++.....+ +.||+|.++... .......+.+|++++.+++||||+++++++.+++..++||||
T Consensus 2 ~lG~G~~g~V~~~~~~~~~-----~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~ 76 (325)
T cd05594 2 LLGKGTFGKVILVKEKATG-----RYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEY 76 (325)
T ss_pred eeeeCCCEEEEEEEECCCC-----CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeC
Confidence 6999999999999987665 799999997642 223346788999999999999999999999999999999999
Q ss_pred ccCCcHHHH-------------------------Hhc-c--cccccCCCCccccccCeEEecCCCcc-----------cc
Q 007935 427 IRNGSLYAA-------------------------LHG-F--GLNRLLPGTSKVTKNETIVTSGTGSR-----------IS 467 (584)
Q Consensus 427 ~~~GsL~~~-------------------------L~~-~--g~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~ 467 (584)
+++|+|..+ ||. . -|+++++.|+.+..++.++..++|.. ..
T Consensus 77 ~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~ 156 (325)
T cd05594 77 ANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTF 156 (325)
T ss_pred CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccc
Confidence 999998544 453 2 36788888888877777888777632 13
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHH
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAK 547 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 547 (584)
.||..|||||++.. ..++.++|||||||++|||+||+.||.... ..............++..+++++
T Consensus 157 ~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tG~~Pf~~~~-----~~~~~~~i~~~~~~~p~~~~~~~------- 223 (325)
T cd05594 157 CGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-----HEKLFELILMEEIRFPRTLSPEA------- 223 (325)
T ss_pred cCCcccCCHHHHcc-CCCCCccccccccceeeeeccCCCCCCCCC-----HHHHHHHHhcCCCCCCCCCCHHH-------
Confidence 58999999999544 678999999999999999999999997422 23333333333333444455444
Q ss_pred HHHHHHHHHHhcccCCCCCCCC-----ChHHHHH
Q 007935 548 RQVLATFHIALNCTELDPEFRP-----RMRTVSE 576 (584)
Q Consensus 548 ~~~~~~~~l~~~Cl~~~P~~RP-----t~~ev~~ 576 (584)
.+++.+||+.||++|+ ++.++++
T Consensus 224 ------~~li~~~L~~dP~~R~~~~~~~~~~il~ 251 (325)
T cd05594 224 ------KSLLSGLLKKDPKQRLGGGPDDAKEIMQ 251 (325)
T ss_pred ------HHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence 3466679999999996 8888874
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-27 Score=241.64 Aligned_cols=201 Identities=20% Similarity=0.289 Sum_probs=151.7
Q ss_pred eceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEeee
Q 007935 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 349 ~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
+||+|+||.||+|+....+ +.||||.++... .....+.+..|..++... +||||+++++++..++..++|||
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e 76 (316)
T cd05592 2 VLGKGSFGKVMLAELKGTN-----EFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVME 76 (316)
T ss_pred eeeeCCCeEEEEEEECCCC-----CEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEc
Confidence 6999999999999987765 789999997642 222335667788887765 89999999999999999999999
Q ss_pred cccCCcHHHHHh-------------------------ccc--ccccCCCCccccccCeEEecCCCccc-----------c
Q 007935 426 FIRNGSLYAALH-------------------------GFG--LNRLLPGTSKVTKNETIVTSGTGSRI-----------S 467 (584)
Q Consensus 426 y~~~GsL~~~L~-------------------------~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~-----------~ 467 (584)
|+++|+|.++++ +.| |+++++.|+.+..++.++..++|... .
T Consensus 77 ~~~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~ 156 (316)
T cd05592 77 YLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTF 156 (316)
T ss_pred CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccccc
Confidence 999999976553 333 57777788777777777777776332 3
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHH
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAK 547 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 547 (584)
.||..|+|||++. +..++.++|||||||++|||++|+.||.+.. ..............++..+++.+
T Consensus 157 ~gt~~y~aPE~~~-~~~~~~~~DvwslG~il~ell~G~~Pf~~~~-----~~~~~~~i~~~~~~~~~~~~~~~------- 223 (316)
T cd05592 157 CGTPDYIAPEILK-GQKYNESVDWWSFGVLLYEMLIGQSPFHGED-----EDELFDSILNDRPHFPRWISKEA------- 223 (316)
T ss_pred cCCccccCHHHHc-CCCCCCcccchhHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHcCCCCCCCCCCHHH-------
Confidence 5899999999854 4678999999999999999999999997532 23333333333333333333333
Q ss_pred HHHHHHHHHHhcccCCCCCCCCChHH
Q 007935 548 RQVLATFHIALNCTELDPEFRPRMRT 573 (584)
Q Consensus 548 ~~~~~~~~l~~~Cl~~~P~~RPt~~e 573 (584)
.+++.+||+.||++||++.+
T Consensus 224 ------~~ll~~~l~~~P~~R~~~~~ 243 (316)
T cd05592 224 ------KDCLSKLFERDPTKRLGVDG 243 (316)
T ss_pred ------HHHHHHHccCCHHHcCCChH
Confidence 34667799999999999763
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.2e-27 Score=231.65 Aligned_cols=215 Identities=21% Similarity=0.315 Sum_probs=155.5
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEe-CCceeEeeec
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYA-NDEKLLISDF 426 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~-~~~~~lV~Ey 426 (584)
++||+|+||.||+|...+.. .....||+|++.........+.|.+|+.++++++||||+++++++.. ++..++||||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 78 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSD--GQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPY 78 (262)
T ss_pred CcccccCCceEEEEEEecCC--CceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEec
Confidence 36899999999999875432 11268999998654444445789999999999999999999998864 5568999999
Q ss_pred ccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc------------
Q 007935 427 IRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI------------ 466 (584)
Q Consensus 427 ~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~------------ 466 (584)
+++|+|.++++. . -|+++.+.|+.+..+...+..++|...
T Consensus 79 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 158 (262)
T cd05058 79 MKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHN 158 (262)
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcceeecc
Confidence 999999877643 1 356677777777666666666665321
Q ss_pred ---ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhC-CCCCCCCCCCCCcHHHHHHHHhhcCCC-CccccChhhh
Q 007935 467 ---SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTG-RLPDAGPENDGKGLESLVRKAFRERRP-LSEVIDPALV 541 (584)
Q Consensus 467 ---~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG-~~p~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~d~~~~ 541 (584)
..++..|+|||++.. ..++.++|||||||++|||++| .+||... ............... ....+.
T Consensus 159 ~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~---- 228 (262)
T cd05058 159 HTGAKLPVKWMALESLQT-QKFTTKSDVWSFGVLLWELMTRGAPPYPDV-----DSFDITVYLLQGRRLLQPEYCP---- 228 (262)
T ss_pred cccCcCCccccChhHhcc-CccchHHHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHHhcCCCCCCCCcCC----
Confidence 134567999998554 6789999999999999999995 5556431 122233332222211 111111
Q ss_pred hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 542 KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 542 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
..+.+++..||+.+|++||++.||++.|+++..
T Consensus 229 ---------~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 229 ---------DPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred ---------HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 245668888999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.2e-28 Score=241.37 Aligned_cols=206 Identities=18% Similarity=0.260 Sum_probs=168.1
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCC-CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCc-eeEeee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDE-KLLISD 425 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~-~~lV~E 425 (584)
+.+|+|+||.++.++++..+ +.+++|.+... .....++...+|+.++++++|||||.+.+.+.+++. .+|||+
T Consensus 10 ~~iG~GafG~a~lvrhk~~~-----~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~ 84 (426)
T KOG0589|consen 10 RQVGRGAFGSALLVRHKSDD-----KLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVME 84 (426)
T ss_pred hhcCccccchhhhhhhccCC-----ceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEe
Confidence 57999999999999988776 79999999876 334445678999999999999999999999999998 999999
Q ss_pred cccCCcHHHHH---------------------------hcc--cccccCCCCccccccCeEEecCCCc-----------c
Q 007935 426 FIRNGSLYAAL---------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGS-----------R 465 (584)
Q Consensus 426 y~~~GsL~~~L---------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~-----------~ 465 (584)
|++||++.+.+ |+. -|+|++..|+....++.+...+||. .
T Consensus 85 Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~a~ 164 (426)
T KOG0589|consen 85 YCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSLAS 164 (426)
T ss_pred ecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCchhhhh
Confidence 99999996554 322 3678888888888887777777763 2
Q ss_pred cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcC-CCCccccChhhhhhh
Q 007935 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER-RPLSEVIDPALVKEI 544 (584)
Q Consensus 466 ~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~d~~~~~~~ 544 (584)
...||+.||.||.+ .+..|+.|+||||+||++|||++-+++|.. .++..++.+..+.. .+++..+..++..
T Consensus 165 tvvGTp~YmcPEil-~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a-----~~m~~Li~ki~~~~~~Plp~~ys~el~~-- 236 (426)
T KOG0589|consen 165 TVVGTPYYMCPEIL-SDIPYNEKSDIWSLGCCLYEMCTLKPAFKA-----SNMSELILKINRGLYSPLPSMYSSELRS-- 236 (426)
T ss_pred eecCCCcccCHHHh-CCCCCCccCcchhhcchHHHHHhcccccCc-----cchHHHHHHHhhccCCCCCccccHHHHH--
Confidence 35899999999995 458999999999999999999999999974 45566666666554 4566666666655
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChHHHHHH
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSES 577 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 577 (584)
++..|+..+|..||++.+++.+
T Consensus 237 -----------lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 237 -----------LVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred -----------HHHHHhhcCCccCCCHHHHhhC
Confidence 4444999999999999999865
|
|
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.5e-28 Score=249.67 Aligned_cols=206 Identities=18% Similarity=0.274 Sum_probs=153.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||+||+|+....+ +.||||++.... .....+.+.+|++++++++|||||++++++.+.+..++||
T Consensus 6 ~~~LG~G~~g~Vy~~~~~~~~-----~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~ 80 (381)
T cd05626 6 IKTLGIGAFGEVCLACKVDTH-----ALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (381)
T ss_pred EEEEeecCCEEEEEEEECCCC-----CEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEE
Confidence 357999999999999987765 799999997642 2233467899999999999999999999999999999999
Q ss_pred ecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCcc------------
Q 007935 425 DFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR------------ 465 (584)
Q Consensus 425 Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~------------ 465 (584)
||+++|+|.+++. .. -|+++++.|+.+..++.++..++|..
T Consensus 81 E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~ 160 (381)
T cd05626 81 DYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYY 160 (381)
T ss_pred ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCcccccccccccc
Confidence 9999999976653 33 35778888887776677777666531
Q ss_pred ----------------------------------------------cccCCCcccCccccccCCCCCCccchhhHHHHHH
Q 007935 466 ----------------------------------------------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLL 499 (584)
Q Consensus 466 ----------------------------------------------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ 499 (584)
...||..|||||++.. ..++.++|||||||++|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~DiwSlG~il~ 239 (381)
T cd05626 161 QKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLR-KGYTQLCDWWSVGVILF 239 (381)
T ss_pred cccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcC-CCCCCccceeehhhHHH
Confidence 1358999999999554 67899999999999999
Q ss_pred HHHhCCCCCCCCCCCCCcHHHHHHHHhh--cCCCCc--cccChhhhhhhhHHHHHHHHHHHHh--cccCCCCCCCCChHH
Q 007935 500 EILTGRLPDAGPENDGKGLESLVRKAFR--ERRPLS--EVIDPALVKEIHAKRQVLATFHIAL--NCTELDPEFRPRMRT 573 (584)
Q Consensus 500 ElltG~~p~~~~~~~~~~l~~~~~~~~~--~~~~~~--~~~d~~~~~~~~~~~~~~~~~~l~~--~Cl~~~P~~RPt~~e 573 (584)
||+||+.||...... ........ .....+ ..++++..+ ++. .|+..+|..||++.|
T Consensus 240 elltG~~Pf~~~~~~-----~~~~~i~~~~~~~~~~~~~~~s~~~~d-------------li~~ll~~~~~~~~R~~~~~ 301 (381)
T cd05626 240 EMLVGQPPFLAPTPT-----ETQLKVINWENTLHIPPQVKLSPEAVD-------------LITKLCCSAEERLGRNGADD 301 (381)
T ss_pred HHHhCCCCCcCCCHH-----HHHHHHHccccccCCCCCCCCCHHHHH-------------HHHHHccCcccccCCCCHHH
Confidence 999999999753221 11111111 111111 123333332 333 277778888999999
Q ss_pred HHH
Q 007935 574 VSE 576 (584)
Q Consensus 574 v~~ 576 (584)
+++
T Consensus 302 ~l~ 304 (381)
T cd05626 302 IKA 304 (381)
T ss_pred Hhc
Confidence 975
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.4e-27 Score=232.66 Aligned_cols=212 Identities=23% Similarity=0.304 Sum_probs=157.7
Q ss_pred eceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEeeecc
Q 007935 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISDFI 427 (584)
Q Consensus 349 ~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~Ey~ 427 (584)
+||+|+||.||+|...+++. ...+|+|.++........+.|.+|++++.++ +||||+++++++...+..++||||+
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~---~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~ 78 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGL---RMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA 78 (270)
T ss_pred cCCCCCCceEEEEEEcCCCC---eeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeC
Confidence 68999999999999876531 1467999887543344447899999999999 8999999999999999999999999
Q ss_pred cCCcHHHHHhc-----------------------------------------c--cccccCCCCccccccCeEEecCCCc
Q 007935 428 RNGSLYAALHG-----------------------------------------F--GLNRLLPGTSKVTKNETIVTSGTGS 464 (584)
Q Consensus 428 ~~GsL~~~L~~-----------------------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~ 464 (584)
++|+|.++++. . -|+++.+.|..+..+...+..+++.
T Consensus 79 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl 158 (270)
T cd05047 79 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGL 158 (270)
T ss_pred CCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCC
Confidence 99999877642 1 2566667777676666677777764
Q ss_pred cc----------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCC-CC
Q 007935 465 RI----------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERR-PL 532 (584)
Q Consensus 465 ~~----------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~-~~ 532 (584)
.. ...+..|+|||++. +..++.++|||||||++|||+| |+.||.+.. ............. ..
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~apE~~~-~~~~~~~~Di~slG~il~el~~~g~~pf~~~~-----~~~~~~~~~~~~~~~~ 232 (270)
T cd05047 159 SRGQEVYVKKTMGRLPVRWMAIESLN-YSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT-----CAELYEKLPQGYRLEK 232 (270)
T ss_pred ccccchhhhccCCCCccccCChHHHc-cCCCCchhhHHHHHHHHHHHHcCCCCCccccC-----HHHHHHHHhCCCCCCC
Confidence 31 12345699999854 4678999999999999999997 999996422 2222222221111 11
Q ss_pred ccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 533 SEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 533 ~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
....+ ..+.+++.+||+.+|.+|||+.++++.|+++-
T Consensus 233 ~~~~~-------------~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 233 PLNCD-------------DEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred CCcCC-------------HHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 11111 24567888899999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-27 Score=242.28 Aligned_cols=201 Identities=18% Similarity=0.282 Sum_probs=150.1
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHH---HhcCCCceeeeeEEEEeCCcee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAI---ARVQHPNIVRLKAFYYANDEKL 421 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l---~~l~HpnIV~l~g~~~~~~~~~ 421 (584)
.+.||+|+||.||+|.....+ +.||||.++... .....+.+.+|+.++ ++++||||+++++++.+.+..+
T Consensus 4 ~~~lg~G~~g~Vy~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~ 78 (324)
T cd05589 4 LAVLGRGHFGKVLLAEYKKTG-----ELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVC 78 (324)
T ss_pred EEEEeecCCEEEEEEEECCCC-----CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEE
Confidence 357999999999999987765 799999997542 222335677777655 5678999999999999999999
Q ss_pred EeeecccCCcHHHHH------------------------hccc--ccccCCCCccccccCeEEecCCCcc----------
Q 007935 422 LISDFIRNGSLYAAL------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSR---------- 465 (584)
Q Consensus 422 lV~Ey~~~GsL~~~L------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~---------- 465 (584)
+||||+++|+|..++ |+.| |+++.+.|+.+..++.++..++|..
T Consensus 79 lv~E~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~ 158 (324)
T cd05589 79 FVMEYAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDRT 158 (324)
T ss_pred EEEcCCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCCcc
Confidence 999999999996544 4433 5777778877777777777777632
Q ss_pred -cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhh
Q 007935 466 -ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEI 544 (584)
Q Consensus 466 -~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~ 544 (584)
...||+.|||||++. +..++.++|||||||++|||++|+.||.+.. ...............+..+++.
T Consensus 159 ~~~~g~~~y~aPE~~~-~~~~~~~~DiwslG~il~el~~G~~pf~~~~-----~~~~~~~i~~~~~~~p~~~~~~----- 227 (324)
T cd05589 159 STFCGTPEFLAPEVLT-ETSYTRAVDWWGLGVLIYEMLVGESPFPGDD-----EEEVFDSIVNDEVRYPRFLSRE----- 227 (324)
T ss_pred cccccCccccCHhHhc-CCCCCcccchhhHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhCCCCCCCCCCHH-----
Confidence 135889999999854 4688999999999999999999999997432 2333333333333333333333
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCCh
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRM 571 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~ 571 (584)
+.+++.+||+.||.+||++
T Consensus 228 --------~~~li~~~L~~dP~~R~~~ 246 (324)
T cd05589 228 --------AISIMRRLLRRNPERRLGS 246 (324)
T ss_pred --------HHHHHHHHhhcCHhHcCCC
Confidence 3457777999999999953
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-27 Score=237.09 Aligned_cols=207 Identities=17% Similarity=0.237 Sum_probs=151.1
Q ss_pred ceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeecc
Q 007935 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (584)
Q Consensus 350 iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 427 (584)
||+|+||+||++.....+ +.||||.+.... .....+.+..|++++++++||||+++.+++.+++..++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~-----~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 75 (280)
T cd05608 1 LGKGGFGEVSACQMRATG-----KLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIM 75 (280)
T ss_pred CCCCCceeEEEEEEccCC-----cEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCC
Confidence 699999999999987665 799999997542 2223366789999999999999999999999999999999999
Q ss_pred cCCcHHHHH-----------------------------hccc--ccccCCCCccccccCeEEecCCCccc----------
Q 007935 428 RNGSLYAAL-----------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 428 ~~GsL~~~L-----------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
++|+|..++ |+.| |+++.+.|+.+..+..++..++|...
T Consensus 76 ~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~ 155 (280)
T cd05608 76 NGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTK 155 (280)
T ss_pred CCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcccc
Confidence 999996555 2223 46666777766666666666665432
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIH 545 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~ 545 (584)
..||..|+|||++.. ..++.++|||||||++|||++|+.||....... ................+..+++
T Consensus 156 ~~~g~~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~------- 226 (280)
T cd05608 156 GYAGTPGFMAPELLQG-EEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKELKQRILNDSVTYPDKFSP------- 226 (280)
T ss_pred ccCCCcCccCHHHhcC-CCCCccccHHHHHHHHHHHHhCCCCCCCCCcch-hHHHHHHhhcccCCCCcccCCH-------
Confidence 257889999999654 688999999999999999999999997532211 1122222222222112222222
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCC-----ChHHHHH
Q 007935 546 AKRQVLATFHIALNCTELDPEFRP-----RMRTVSE 576 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RP-----t~~ev~~ 576 (584)
.+.+++.+||+.||++|| +++++++
T Consensus 227 ------~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 227 ------ASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred ------HHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 344577779999999999 6677764
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=99.95 E-value=3e-27 Score=230.17 Aligned_cols=206 Identities=23% Similarity=0.345 Sum_probs=154.8
Q ss_pred eceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeeccc
Q 007935 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIR 428 (584)
Q Consensus 349 ~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~ 428 (584)
+||+|+||.||+|...++ ..||+|.++..........|.+|++++++++||||+++++++...+..++||||++
T Consensus 2 ~ig~g~~g~vy~~~~~~~------~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 75 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDK------TPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVP 75 (250)
T ss_pred ccCCCCCceEEEEEecCC------cEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCC
Confidence 689999999999987654 78999998765444444679999999999999999999999999999999999999
Q ss_pred CCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc------------cc
Q 007935 429 NGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI------------SA 468 (584)
Q Consensus 429 ~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~------------~~ 468 (584)
+|+|.+++.. . -|+++.++|+.+..+...+..+++... ..
T Consensus 76 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~ 155 (250)
T cd05085 76 GGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQ 155 (250)
T ss_pred CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCC
Confidence 9999877642 1 356677777777666766777765332 12
Q ss_pred CCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCC-CCccccChhhhhhhhH
Q 007935 469 ISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERR-PLSEVIDPALVKEIHA 546 (584)
Q Consensus 469 gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~d~~~~~~~~~ 546 (584)
++..|+|||++.. ..++.++|||||||++||+++ |..||.... ............. ..+..+
T Consensus 156 ~~~~y~aPE~~~~-~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~---------- 219 (250)
T cd05085 156 IPIKWTAPEALNY-GRYSSESDVWSYGILLWETFSLGVCPYPGMT-----NQQAREQVEKGYRMSCPQKC---------- 219 (250)
T ss_pred CcccccCHHHhcc-CCCCchhHHHHHHHHHHHHhcCCCCCCCCCC-----HHHHHHHHHcCCCCCCCCCC----------
Confidence 3456999998544 678999999999999999999 999986432 1222222111111 111111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCChHHHHHHHH
Q 007935 547 KRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579 (584)
Q Consensus 547 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~ 579 (584)
...+.+++.+||+.+|++||++.|+++.|.
T Consensus 220 ---~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 220 ---PDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred ---CHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 124566888899999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-27 Score=234.75 Aligned_cols=215 Identities=20% Similarity=0.241 Sum_probs=150.2
Q ss_pred eceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeeccc
Q 007935 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIR 428 (584)
Q Consensus 349 ~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~ 428 (584)
.||+|+||.||+|...++. ....+|+|.++..........|.+|+.++++++||||+++++++.+....++||||++
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGY---TPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCP 78 (269)
T ss_pred cccccCCceEEEEEEcCCC---CceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCC
Confidence 5899999999999875432 1267999998765443444679999999999999999999999999999999999999
Q ss_pred CCcHHHHHhcc--------------------------------cccccCCCCccccccCeEEecCCCccc----------
Q 007935 429 NGSLYAALHGF--------------------------------GLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 429 ~GsL~~~L~~~--------------------------------g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
+|+|.++++.. -|+++.+.|+.+..+..++..+++...
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~ 158 (269)
T cd05087 79 LGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVT 158 (269)
T ss_pred CCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcceeec
Confidence 99998877531 245666667666666666666665321
Q ss_pred ---ccCCCcccCccccccC------CCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCCCcccc
Q 007935 467 ---SAISNVYLAPEARIYG------SKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVI 536 (584)
Q Consensus 467 ---~~gt~~y~aPE~~~~~------~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 536 (584)
..++..|+|||++... ..++.++|||||||++|||++ |+.||...... ............ ...
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~----~~~~~~~~~~~~---~~~ 231 (269)
T cd05087 159 PDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDE----QVLTYTVREQQL---KLP 231 (269)
T ss_pred CCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChH----HHHHHHhhcccC---CCC
Confidence 2356779999985421 135789999999999999996 99999643221 111111111111 111
Q ss_pred ChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHH
Q 007935 537 DPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579 (584)
Q Consensus 537 d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~ 579 (584)
++.+.... ...+.+++..|| .+|++|||++||++.|+
T Consensus 232 ~~~~~~~~-----~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 232 KPRLKLPL-----SDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCccCCCC-----ChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 12111100 113445777798 58999999999999875
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.5e-28 Score=242.28 Aligned_cols=205 Identities=18% Similarity=0.260 Sum_probs=155.1
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
+.||+|+||.||+|+...++ +.||||.++... .....+.+.+|++++..+ +||||+++++++.+.+..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~ 75 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTD-----ELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVM 75 (318)
T ss_pred CeeeeCCCeEEEEEEECCCC-----CEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEE
Confidence 36999999999999987765 799999998641 223346788999999988 7999999999999999999999
Q ss_pred ecccCCcHHHHHh-------------------------ccc--ccccCCCCccccccCeEEecCCCcc-----------c
Q 007935 425 DFIRNGSLYAALH-------------------------GFG--LNRLLPGTSKVTKNETIVTSGTGSR-----------I 466 (584)
Q Consensus 425 Ey~~~GsL~~~L~-------------------------~~g--~~~~~~~~~~i~~~~~~~~~~~~~~-----------~ 466 (584)
||+++|+|..++. +.| |+++.+.|+.+..++.++..++|.. .
T Consensus 76 e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 155 (318)
T cd05570 76 EYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTST 155 (318)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccc
Confidence 9999999965553 333 5667777777777777777776632 1
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhH
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 546 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 546 (584)
..||..|+|||++. +..++.++|||||||++|||+||+.||.... ...............+..+++
T Consensus 156 ~~g~~~y~aPE~~~-~~~~~~~~DiwslGvil~~l~~G~~pf~~~~-----~~~~~~~i~~~~~~~~~~~~~-------- 221 (318)
T cd05570 156 FCGTPDYIAPEILS-YQPYGPAVDWWALGVLLYEMLAGQSPFEGDD-----EDELFQSILEDEVRYPRWLSK-------- 221 (318)
T ss_pred eecCccccCHHHhc-CCCCCcchhhhhHHHHHHHHhhCCCCCCCCC-----HHHHHHHHHcCCCCCCCcCCH--------
Confidence 35889999999954 4689999999999999999999999997422 233333333333222333333
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCCh-----HHHHH
Q 007935 547 KRQVLATFHIALNCTELDPEFRPRM-----RTVSE 576 (584)
Q Consensus 547 ~~~~~~~~~l~~~Cl~~~P~~RPt~-----~ev~~ 576 (584)
.+.+++.+||+.||++||++ .++++
T Consensus 222 -----~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 222 -----EAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred -----HHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 34557778999999999999 77754
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.9e-27 Score=233.87 Aligned_cols=214 Identities=24% Similarity=0.397 Sum_probs=156.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|.....+ ......||+|.+.........+.|.+|++++++++|||||++++++..++..++||||
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~-~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 88 (283)
T cd05090 10 MEELGECAFGKIYKGHLYLPG-MDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCMLFEY 88 (283)
T ss_pred eeeccccCCcceEEEEEecCC-CCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEEEEc
Confidence 367999999999999864321 1122789999998654444457899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHh------------------------------------------cc--cccccCCCCccccccCeEEecCC
Q 007935 427 IRNGSLYAALH------------------------------------------GF--GLNRLLPGTSKVTKNETIVTSGT 462 (584)
Q Consensus 427 ~~~GsL~~~L~------------------------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~ 462 (584)
+++|+|.++++ +. -|+++.+.|..+..+..++..++
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~kl~df 168 (283)
T cd05090 89 LNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDL 168 (283)
T ss_pred CCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCCcEEeccc
Confidence 99999987763 22 24666677777766666666666
Q ss_pred Cccc-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhc
Q 007935 463 GSRI-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRE 528 (584)
Q Consensus 463 ~~~~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~ 528 (584)
+... ..++..|+|||++.. ..++.++|||||||++|||++ |..||.+.. ...........
T Consensus 169 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~~g~~p~~~~~-----~~~~~~~~~~~ 242 (283)
T cd05090 169 GLSREIYSADYYRVQPKSLLPIRWMPPEAIMY-GKFSSDSDIWSFGVVLWEIFSFGLQPYYGFS-----NQEVIEMVRKR 242 (283)
T ss_pred cccccccCCcceecccCCCccceecChHHhcc-CCCCchhhhHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHHHcC
Confidence 5432 234557999998654 578999999999999999999 999986422 12222222111
Q ss_pred C-CCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHh
Q 007935 529 R-RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580 (584)
Q Consensus 529 ~-~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 580 (584)
. .+.+..+++ ++.+++.+||+.||++||++.+|.+.|..
T Consensus 243 ~~~~~~~~~~~-------------~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 243 QLLPCSEDCPP-------------RMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred CcCCCCCCCCH-------------HHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 1 112222232 34557778999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-27 Score=235.31 Aligned_cols=211 Identities=20% Similarity=0.327 Sum_probs=157.5
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeecc
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 427 (584)
++||+|+||.||+|....++ +.||+|.+.........++|.+|++++++++||||+++++++...+..++||||+
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (279)
T cd06619 7 EILGHGNGGTVYKAYHLLTR-----RILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM 81 (279)
T ss_pred eeeccCCCeEEEEEEEcCCC-----cEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence 57999999999999987665 7899999876544444477999999999999999999999999999999999999
Q ss_pred cCCcHH---------------------HHHhccc--ccccCCCCccccccCeEEecCCCcc---------cccCCCcccC
Q 007935 428 RNGSLY---------------------AALHGFG--LNRLLPGTSKVTKNETIVTSGTGSR---------ISAISNVYLA 475 (584)
Q Consensus 428 ~~GsL~---------------------~~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~---------~~~gt~~y~a 475 (584)
++|+|. +|||+.| |.++.+.|+.+..+..++..++|.. ...||..|+|
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~a 161 (279)
T cd06619 82 DGGSLDVYRKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYVGTNAYMA 161 (279)
T ss_pred CCCChHHhhcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCCCCChhhcC
Confidence 999884 4456555 5667777777777777777777643 2367889999
Q ss_pred ccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCc--HHHHHHHHhhcCCC-C-ccccChhhhhhhhHHHHHH
Q 007935 476 PEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKG--LESLVRKAFRERRP-L-SEVIDPALVKEIHAKRQVL 551 (584)
Q Consensus 476 PE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~--l~~~~~~~~~~~~~-~-~~~~d~~~~~~~~~~~~~~ 551 (584)
||++.. ..++.++|||||||++|||++|+.||......... .............+ . ....++
T Consensus 162 PE~~~~-~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 227 (279)
T cd06619 162 PERISG-EQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSE------------- 227 (279)
T ss_pred ceeecC-CCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCH-------------
Confidence 999554 67899999999999999999999999753322111 11221111111111 0 111222
Q ss_pred HHHHHHhcccCCCCCCCCChHHHHHH
Q 007935 552 ATFHIALNCTELDPEFRPRMRTVSES 577 (584)
Q Consensus 552 ~~~~l~~~Cl~~~P~~RPt~~ev~~~ 577 (584)
++.+++.+||+.+|++||+++|+++.
T Consensus 228 ~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 228 KFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred HHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 34567888999999999999999753
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=240.87 Aligned_cols=203 Identities=18% Similarity=0.291 Sum_probs=152.6
Q ss_pred eceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEeee
Q 007935 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 349 ~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.||+|+||.||+|....++ +.||||.++... .....+.+..|..++... +||||+++++++.+.+..++|||
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~e 76 (316)
T cd05619 2 MLGKGSFGKVFLAELKGTN-----QFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVME 76 (316)
T ss_pred eeeeCCCEEEEEEEECCCC-----CEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEe
Confidence 6999999999999988765 789999997641 122336677888888865 99999999999999999999999
Q ss_pred cccCCcHHHHHh-------------------------ccc--ccccCCCCccccccCeEEecCCCccc-----------c
Q 007935 426 FIRNGSLYAALH-------------------------GFG--LNRLLPGTSKVTKNETIVTSGTGSRI-----------S 467 (584)
Q Consensus 426 y~~~GsL~~~L~-------------------------~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~-----------~ 467 (584)
|+++|+|.+++. +.| |+++++.|+.+..++.++..++|... .
T Consensus 77 y~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 156 (316)
T cd05619 77 YLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTF 156 (316)
T ss_pred CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeee
Confidence 999999976653 333 57777777777777777777776321 3
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHH
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAK 547 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 547 (584)
.||..|+|||++. +..++.++|||||||++|||++|+.||.... ...............+..++.
T Consensus 157 ~gt~~y~aPE~~~-~~~~~~~~DvwslG~il~el~~G~~pf~~~~-----~~~~~~~i~~~~~~~~~~~~~--------- 221 (316)
T cd05619 157 CGTPDYIAPEILL-GQKYNTSVDWWSFGVLLYEMLIGQSPFHGHD-----EEELFQSIRMDNPCYPRWLTR--------- 221 (316)
T ss_pred cCCccccCHHHHc-CCCCCchhhhhhHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhCCCCCCccCCH---------
Confidence 5789999999955 4679999999999999999999999997532 223333322222222222333
Q ss_pred HHHHHHHHHHhcccCCCCCCCCChH-HHH
Q 007935 548 RQVLATFHIALNCTELDPEFRPRMR-TVS 575 (584)
Q Consensus 548 ~~~~~~~~l~~~Cl~~~P~~RPt~~-ev~ 575 (584)
.+.+++.+||+.||++||++. ++.
T Consensus 222 ----~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 222 ----EAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred ----HHHHHHHHHhccCHhhcCCChHHHH
Confidence 234577779999999999997 554
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.5e-27 Score=239.11 Aligned_cols=214 Identities=20% Similarity=0.322 Sum_probs=158.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|++...+. .....||||.++........++|.+|+.+++.++||||++++|+|... ..++|+||
T Consensus 12 ~~~lg~G~~g~Vy~~~~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~v~e~ 89 (316)
T cd05108 12 IKVLGSGAFGTVYKGLWIPEGE-KVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQL 89 (316)
T ss_pred eeeeecCCCceEEEEEEecCCC-ccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cceeeeec
Confidence 4679999999999999765432 222469999997654444457899999999999999999999999764 67899999
Q ss_pred ccCCcHHHHHh--------------------------ccc--ccccCCCCccccccCeEEecCCCcccc-----------
Q 007935 427 IRNGSLYAALH--------------------------GFG--LNRLLPGTSKVTKNETIVTSGTGSRIS----------- 467 (584)
Q Consensus 427 ~~~GsL~~~L~--------------------------~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~~----------- 467 (584)
+++|+|.++++ +.| |+++++.|+.+..+..++..++|....
T Consensus 90 ~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 169 (316)
T cd05108 90 MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAE 169 (316)
T ss_pred CCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccccCCCcceecc
Confidence 99999976654 333 577888888887777777777764321
Q ss_pred --cCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC--CCCccccChhhhh
Q 007935 468 --AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER--RPLSEVIDPALVK 542 (584)
Q Consensus 468 --~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~d~~~~~ 542 (584)
.++..|+|||++.. ..++.++|||||||++|||+| |+.||.+.. ..++.. ..... .+.+...+
T Consensus 170 ~~~~~~~y~apE~~~~-~~~~~~~Di~slGv~l~el~t~g~~p~~~~~-----~~~~~~-~~~~~~~~~~~~~~~----- 237 (316)
T cd05108 170 GGKVPIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYDGIP-----ASEISS-ILEKGERLPQPPICT----- 237 (316)
T ss_pred CCccceeecChHHhcc-CCCCchhhhHHHHHHHHHHHcCCCCCCCCCC-----HHHHHH-HHhCCCCCCCCCCCC-----
Confidence 23457999998554 688999999999999999998 999987422 122211 11111 11111122
Q ss_pred hhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 543 EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 543 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
..+.+++.+||+.+|++||++.+++..|.++.
T Consensus 238 --------~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~ 269 (316)
T cd05108 238 --------IDVYMIMVKCWMIDADSRPKFRELIIEFSKMA 269 (316)
T ss_pred --------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 23456888899999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-27 Score=236.35 Aligned_cols=208 Identities=20% Similarity=0.235 Sum_probs=152.0
Q ss_pred ceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeecc
Q 007935 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (584)
Q Consensus 350 iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 427 (584)
||+|+||.||++.....+ +.||+|++.... .....+.+..|++++++++||||+++++++.++...++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~-----~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 75 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTG-----KMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLM 75 (277)
T ss_pred CCCCCceEEEEEEEccCC-----cEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecC
Confidence 699999999999988765 899999997531 1122345677999999999999999999999999999999999
Q ss_pred cCCcHHHHHh---------------------------cc--cccccCCCCccccccCeEEecCCCcc----------ccc
Q 007935 428 RNGSLYAALH---------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR----------ISA 468 (584)
Q Consensus 428 ~~GsL~~~L~---------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~----------~~~ 468 (584)
++|+|.++++ +. -|+++.+.|+.+..+..++..+++.. ...
T Consensus 76 ~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 155 (277)
T cd05607 76 NGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRA 155 (277)
T ss_pred CCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccC
Confidence 9999965553 22 35677777777766666666666532 235
Q ss_pred CCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCC-ccccChhhhhhhhHH
Q 007935 469 ISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPL-SEVIDPALVKEIHAK 547 (584)
Q Consensus 469 gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~ 547 (584)
|+..|+|||++.. ..++.++||||+||++|||++|+.||...... .....+........... ...+++
T Consensus 156 ~~~~y~aPE~~~~-~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--------- 224 (277)
T cd05607 156 GTNGYMAPEILKE-EPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEK-VAKEELKRRTLEDEVKFEHQNFTE--------- 224 (277)
T ss_pred CCCCccCHHHHcc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCcch-hhHHHHHHHhhccccccccccCCH---------
Confidence 7889999999655 56999999999999999999999999753221 11222222222211111 011222
Q ss_pred HHHHHHHHHHhcccCCCCCCCCChHHHHHH
Q 007935 548 RQVLATFHIALNCTELDPEFRPRMRTVSES 577 (584)
Q Consensus 548 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 577 (584)
++.+++.+||+.||++||+++|+++.
T Consensus 225 ----~~~~li~~~L~~~P~~R~~~~~~~~~ 250 (277)
T cd05607 225 ----ESKDICRLFLAKKPEDRLGSREKNDD 250 (277)
T ss_pred ----HHHHHHHHHhccCHhhCCCCccchhh
Confidence 34567888999999999999776643
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3e-27 Score=237.06 Aligned_cols=214 Identities=22% Similarity=0.291 Sum_probs=157.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|.....+. ...+|+|.++........+.|.+|++++.++ +||||+++++++.+++..++|||
T Consensus 12 ~~~lg~G~~g~V~~a~~~~~~~---~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 88 (303)
T cd05088 12 QDVIGEGNFGQVLKARIKKDGL---RMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIE 88 (303)
T ss_pred eeeecCCCCceEEEEEEccCCc---eeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEEE
Confidence 4679999999999999865431 1467888887544444457899999999999 89999999999999999999999
Q ss_pred cccCCcHHHHHh-----------------------------------------ccc--ccccCCCCccccccCeEEecCC
Q 007935 426 FIRNGSLYAALH-----------------------------------------GFG--LNRLLPGTSKVTKNETIVTSGT 462 (584)
Q Consensus 426 y~~~GsL~~~L~-----------------------------------------~~g--~~~~~~~~~~i~~~~~~~~~~~ 462 (584)
|+++|+|.++++ +.| |+++.+.|..+..+..++..++
T Consensus 89 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~kl~df 168 (303)
T cd05088 89 YAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADF 168 (303)
T ss_pred eCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCcEEeCcc
Confidence 999999977764 222 4666677777766667777777
Q ss_pred Cccc----------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC-C
Q 007935 463 GSRI----------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER-R 530 (584)
Q Consensus 463 ~~~~----------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~-~ 530 (584)
|... ..++..|+|||++. +..++.++|||||||++|||+| |..||..... .+......... .
T Consensus 169 g~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-----~~~~~~~~~~~~~ 242 (303)
T cd05088 169 GLSRGQEVYVKKTMGRLPVRWMAIESLN-YSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-----AELYEKLPQGYRL 242 (303)
T ss_pred ccCcccchhhhcccCCCcccccCHHHHh-ccCCcccccchhhhhHHHHHHhcCCCCcccCCh-----HHHHHHHhcCCcC
Confidence 6432 12355799999854 4678999999999999999998 9999864322 22222221111 0
Q ss_pred CCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 531 PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 531 ~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
..+..++ ..+.+++.+||+.+|++||++.+++++|+++.
T Consensus 243 ~~~~~~~-------------~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~ 281 (303)
T cd05088 243 EKPLNCD-------------DEVYDLMRQCWREKPYERPSFAQILVSLNRML 281 (303)
T ss_pred CCCCCCC-------------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 0111111 23566888899999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.2e-27 Score=231.62 Aligned_cols=208 Identities=26% Similarity=0.361 Sum_probs=155.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|...++ ..||+|.+..... ..+.|.+|+.++++++|+||+++++++.+.+..++||||
T Consensus 11 ~~~lg~g~~g~v~~~~~~~~------~~v~iK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05072 11 VKKLGAGQFGEVWMGYYNNS------TKVAVKTLKPGTM--SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEY 82 (261)
T ss_pred eeecCCcCCceEEEEEecCC------ceEEEEEccCCch--hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEec
Confidence 35799999999999997665 6899999875432 247899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc---------------------------c--cccccCCCCccccccCeEEecCCCccc-----------
Q 007935 427 IRNGSLYAALHG---------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI----------- 466 (584)
Q Consensus 427 ~~~GsL~~~L~~---------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~----------- 466 (584)
+++|+|.++++. . -|+++.+.|+.+..+...+..+++...
T Consensus 83 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~ 162 (261)
T cd05072 83 MAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTARE 162 (261)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCCceeccC
Confidence 999999877643 1 245566677666666666666655322
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC-CCCccccChhhhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER-RPLSEVIDPALVKE 543 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~d~~~~~~ 543 (584)
..++..|+|||++.. ..++.++|||||||++|||+| |+.||..... ........... .+....++
T Consensus 163 ~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~------ 230 (261)
T cd05072 163 GAKFPIKWTAPEAINF-GSFTIKSDVWSFGILLYEIVTYGKIPYPGMSN-----SDVMSALQRGYRMPRMENCP------ 230 (261)
T ss_pred CCccceecCCHHHhcc-CCCChhhhhhhhHHHHHHHHccCCCCCCCCCH-----HHHHHHHHcCCCCCCCCCCC------
Confidence 124557999998544 678999999999999999999 9999864221 12222221111 11111111
Q ss_pred hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhh
Q 007935 544 IHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581 (584)
Q Consensus 544 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 581 (584)
..+.+++.+||+.+|++||+++++.+.|+++
T Consensus 231 -------~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 231 -------DELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred -------HHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 2456688889999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.4e-28 Score=231.41 Aligned_cols=204 Identities=19% Similarity=0.346 Sum_probs=164.6
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCC--CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG--DATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
+.+|+|.||.|-+|+....+ +.||||.+++. .+.+..-.+.|||+||+.++||||++++.+|...+.+.||||
T Consensus 59 etLGkGTYGKVk~A~e~~sg-----R~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivME 133 (668)
T KOG0611|consen 59 ETLGKGTYGKVKLAYEHKSG-----REVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVME 133 (668)
T ss_pred HHhcCCcccceeehhhccCC-----cEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEE
Confidence 35999999999999886655 89999999876 333444568899999999999999999999999999999999
Q ss_pred cccCCcHHHHHhcc---------------------------cccccCCCCccccccCeEEecCCCcc----------ccc
Q 007935 426 FIRNGSLYAALHGF---------------------------GLNRLLPGTSKVTKNETIVTSGTGSR----------ISA 468 (584)
Q Consensus 426 y~~~GsL~~~L~~~---------------------------g~~~~~~~~~~i~~~~~~~~~~~~~~----------~~~ 468 (584)
|..+|.|++|+... .|++++.+|+.++.+.++++.+||.+ ..+
T Consensus 134 YaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfLqTFC 213 (668)
T KOG0611|consen 134 YASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFLQTFC 213 (668)
T ss_pred ecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhccccHHHHhc
Confidence 99999999998542 46888888988888899999998853 358
Q ss_pred CCCcccCccccccCCCC-CCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHH
Q 007935 469 ISNVYLAPEARIYGSKF-TQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAK 547 (584)
Q Consensus 469 gt~~y~aPE~~~~~~~~-~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 547 (584)
|++.|.+||+ ..|..| .+.+|-||+||+||.|+.|..||++ .+...+++++.++...-++. |.
T Consensus 214 GSPLYASPEI-vNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG-----~Dhk~lvrQIs~GaYrEP~~--PS-------- 277 (668)
T KOG0611|consen 214 GSPLYASPEI-VNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDG-----RDHKRLVRQISRGAYREPET--PS-------- 277 (668)
T ss_pred CCcccCCccc-cCCCCCCCCccchhhHHHHHHHHhhcccccCC-----chHHHHHHHhhcccccCCCC--Cc--------
Confidence 9999999998 555666 5899999999999999999999985 33455566655544321111 11
Q ss_pred HHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 548 RQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 548 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
...-++.+++..+|++|.|+.+|..
T Consensus 278 ----dA~gLIRwmLmVNP~RRATieDiAs 302 (668)
T KOG0611|consen 278 ----DASGLIRWMLMVNPERRATIEDIAS 302 (668)
T ss_pred ----hHHHHHHHHHhcCcccchhHHHHhh
Confidence 1123777899999999999999874
|
|
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.3e-27 Score=230.98 Aligned_cols=216 Identities=26% Similarity=0.384 Sum_probs=160.0
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
..+.||+|+||.||+|+....+.. ...||+|.++........+.|.+|++++++++||||+++++++.+.+..++|||
T Consensus 9 ~~~~lg~g~~g~vy~~~~~~~~~~--~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (268)
T cd05063 9 KQKVIGAGEFGEVFRGILKMPGRK--EVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITE 86 (268)
T ss_pred EeeEecCCCCccEEEEEEecCCCC--ceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEE
Confidence 356899999999999998754311 258999999765444445789999999999999999999999999999999999
Q ss_pred cccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCcccc----------
Q 007935 426 FIRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRIS---------- 467 (584)
Q Consensus 426 y~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~~---------- 467 (584)
|+++|+|.++++. . -|+++.+.|+.+..+...+..+++....
T Consensus 87 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 166 (268)
T cd05063 87 YMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYT 166 (268)
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceeccccccccee
Confidence 9999999777643 2 3566777777776666666666653321
Q ss_pred ----cCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhh
Q 007935 468 ----AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVK 542 (584)
Q Consensus 468 ----~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~ 542 (584)
..+..|+|||++.. ..++.++|||||||++|||+| |+.||..... ..+........ ..+...
T Consensus 167 ~~~~~~~~~y~~PE~~~~-~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~-----~~~~~~i~~~~-~~~~~~------ 233 (268)
T cd05063 167 TSGGKIPIRWTAPEAIAY-RKFTSASDVWSFGIVMWEVMSFGERPYWDMSN-----HEVMKAINDGF-RLPAPM------ 233 (268)
T ss_pred ccCCCcCceecCHHHhhc-CCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH-----HHHHHHHhcCC-CCCCCC------
Confidence 12346999998554 678999999999999999998 9999864321 22222222111 111100
Q ss_pred hhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhh
Q 007935 543 EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581 (584)
Q Consensus 543 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 581 (584)
.....+.+++.+||+.+|++||++.+|++.|+++
T Consensus 234 -----~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 234 -----DCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred -----CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 1123456788889999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.9e-28 Score=243.49 Aligned_cols=201 Identities=21% Similarity=0.273 Sum_probs=151.3
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHH-HHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVE-AIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~-~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
++||+|+||+||+|+...++ +.||||++.... .....+++.+|.. +++.++|||||++++++.+.+..++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~ 75 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADG-----KFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVL 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCC-----CEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEE
Confidence 36999999999999998765 899999997542 1222345666665 567899999999999999999999999
Q ss_pred ecccCCcHHHHH-------------------------hccc--ccccCCCCccccccCeEEecCCCcc-----------c
Q 007935 425 DFIRNGSLYAAL-------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSR-----------I 466 (584)
Q Consensus 425 Ey~~~GsL~~~L-------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~-----------~ 466 (584)
||+++|+|..++ |+.| |+++.+.|+.+..++.++..++|.. .
T Consensus 76 e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 155 (323)
T cd05575 76 DYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTST 155 (323)
T ss_pred cCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCcccc
Confidence 999999996554 3333 5777778887777777777777632 1
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhH
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 546 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 546 (584)
..||+.|+|||++. +..++.++|||||||++|||++|+.||... ...+...........+...+++.
T Consensus 156 ~~gt~~y~aPE~~~-~~~~~~~~DvwslG~il~ell~g~~pf~~~-----~~~~~~~~i~~~~~~~~~~~~~~------- 222 (323)
T cd05575 156 FCGTPEYLAPEVLR-KQPYDRTVDWWCLGAVLYEMLYGLPPFYSR-----DTAEMYDNILNKPLRLKPNISVS------- 222 (323)
T ss_pred ccCChhhcChhhhc-CCCCCccccccccchhhhhhhcCCCCCCCC-----CHHHHHHHHHcCCCCCCCCCCHH-------
Confidence 35889999999955 467999999999999999999999999742 23344444443333333333333
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCChH
Q 007935 547 KRQVLATFHIALNCTELDPEFRPRMR 572 (584)
Q Consensus 547 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ 572 (584)
+.+++.+|++.||++||++.
T Consensus 223 ------~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 223 ------ARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred ------HHHHHHHHhhcCHHhCCCCC
Confidence 34577779999999999985
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.5e-29 Score=225.10 Aligned_cols=209 Identities=20% Similarity=0.275 Sum_probs=154.1
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCC-CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
++||+|.|+.||++....++ +.+|+|.+... -.....+++.+|+.|...++|||||+|.+.+.+.+..|+|+|+
T Consensus 17 e~igkG~FSvVrRc~~~~tg-----~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~ 91 (355)
T KOG0033|consen 17 EELGKGAFSVVRRCVHKTTG-----LEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDL 91 (355)
T ss_pred HHHccCchHHHHHHHhccch-----HHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEec
Confidence 46999999999999988877 66677766543 1222347889999999999999999999999999999999999
Q ss_pred ccCCcHH-------------------------HHHhcc--cccccCCCCcccccc---CeEEecCCCcc----------c
Q 007935 427 IRNGSLY-------------------------AALHGF--GLNRLLPGTSKVTKN---ETIVTSGTGSR----------I 466 (584)
Q Consensus 427 ~~~GsL~-------------------------~~L~~~--g~~~~~~~~~~i~~~---~~~~~~~~~~~----------~ 466 (584)
|.||+|. +|.|.. .|++++++|..+... .+++..+||.. .
T Consensus 92 m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~~G 171 (355)
T KOG0033|consen 92 VTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAWHG 171 (355)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCCcccccc
Confidence 9999983 334444 467888877654332 44555555432 3
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhH
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 546 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 546 (584)
.+||++|||||++.. .+|+..+|||+.||+||-|+.|.+||.+.+.. ..++++....+.-..+..+.++++.++
T Consensus 172 ~~GtP~fmaPEvvrk-dpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~-rlye~I~~g~yd~~~~~w~~is~~Ak~---- 245 (355)
T KOG0033|consen 172 FAGTPGYLSPEVLKK-DPYSKPVDIWACGVILYILLVGYPPFWDEDQH-RLYEQIKAGAYDYPSPEWDTVTPEAKS---- 245 (355)
T ss_pred ccCCCcccCHHHhhc-CCCCCcchhhhhhHHHHHHHhCCCCCCCccHH-HHHHHHhccccCCCCcccCcCCHHHHH----
Confidence 479999999999554 79999999999999999999999999853221 122222222222222234445555444
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 547 KRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 547 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
++.+|+..||.+|.|+.|.++
T Consensus 246 ---------LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 246 ---------LIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred ---------HHHHHhccChhhhccHHHHhC
Confidence 566699999999999999874
|
|
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-27 Score=234.17 Aligned_cols=213 Identities=20% Similarity=0.291 Sum_probs=158.4
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
+.||+|+||.||++....++ ..||||.+.... .....++|.+|+.++++++||||+++++++.+++..++|||
T Consensus 8 ~~ig~g~~g~v~~~~~~~~~-----~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 82 (267)
T cd08229 8 KKIGRGQFSEVYRATCLLDG-----VPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLE 82 (267)
T ss_pred hhhcccCCeEEEEEeecCCC-----ceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEE
Confidence 56999999999999986655 799999886532 22334689999999999999999999999999999999999
Q ss_pred cccCCcHHHHHhc-----------------------------c--cccccCCCCccccccCeEEecCCCcc---------
Q 007935 426 FIRNGSLYAALHG-----------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSR--------- 465 (584)
Q Consensus 426 y~~~GsL~~~L~~-----------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~--------- 465 (584)
|+++++|.++++. . -|+++.+.|+.+..++.+...+++..
T Consensus 83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~ 162 (267)
T cd08229 83 LADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA 162 (267)
T ss_pred ecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCCcc
Confidence 9999999776642 2 24556666666666666666666532
Q ss_pred --cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC-C-ccccChhhh
Q 007935 466 --ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP-L-SEVIDPALV 541 (584)
Q Consensus 466 --~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~-~-~~~~d~~~~ 541 (584)
...|+..|+|||++. +..++.++||||||+++|||++|..||..... ....+.........+ . ...++
T Consensus 163 ~~~~~~~~~~~ape~~~-~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~---- 234 (267)
T cd08229 163 AHSLVGTPYYMSPERIH-ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM---NLYSLCKKIEQCDYPPLPSDHYS---- 234 (267)
T ss_pred cccccCCcCccCHHHhc-CCCccchhhHHHHHHHHHHHHhCCCCcccccc---hHHHHhhhhhcCCCCCCCccccc----
Confidence 235778899999854 46789999999999999999999999864322 122222222111111 1 11122
Q ss_pred hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 542 KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 542 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
..+.+++.+||+.||++||||.+|+++++++.
T Consensus 235 ---------~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 235 ---------EELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred ---------HHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 24556778899999999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-27 Score=239.40 Aligned_cols=204 Identities=20% Similarity=0.233 Sum_probs=154.1
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
++||+|+||.||+|+....+ ..||+|.++... .....+.+..|..++... +||||+++++++.+.+..++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~-----~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 75 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKG-----EYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCC-----CEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEE
Confidence 36999999999999988765 799999997642 122346678888888765 8999999999999999999999
Q ss_pred ecccCCcHHHHH-------------------------hcc--cccccCCCCccccccCeEEecCCCcc-----------c
Q 007935 425 DFIRNGSLYAAL-------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSR-----------I 466 (584)
Q Consensus 425 Ey~~~GsL~~~L-------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~-----------~ 466 (584)
||+++|+|.+++ |+. -|++++++|+.+..++.++..++|.. .
T Consensus 76 E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 155 (316)
T cd05620 76 EFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRAST 155 (316)
T ss_pred CCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceec
Confidence 999999996555 333 36778888887777777777777632 2
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhH
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 546 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 546 (584)
..||..|+|||++.. ..++.++|||||||++|||++|+.||.... ..............++..+++++
T Consensus 156 ~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~el~~g~~Pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~~------ 223 (316)
T cd05620 156 FCGTPDYIAPEILQG-LKYTFSVDWWSFGVLLYEMLIGQSPFHGDD-----EDELFESIRVDTPHYPRWITKES------ 223 (316)
T ss_pred cCCCcCccCHHHHcC-CCCCcccchhhhHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhCCCCCCCCCCHHH------
Confidence 358999999999554 689999999999999999999999997422 22333333323333333344333
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCChH-HHH
Q 007935 547 KRQVLATFHIALNCTELDPEFRPRMR-TVS 575 (584)
Q Consensus 547 ~~~~~~~~~l~~~Cl~~~P~~RPt~~-ev~ 575 (584)
.+++.+||+.||++||++. ++.
T Consensus 224 -------~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 224 -------KDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred -------HHHHHHHccCCHHHcCCChHHHH
Confidence 3466779999999999985 554
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.9e-27 Score=234.27 Aligned_cols=214 Identities=23% Similarity=0.310 Sum_probs=158.4
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.++||+|+||.||+|...+.+.. ..+++|.++........+.|.+|+++++++ +||||+++++++.+.+..++|||
T Consensus 7 ~~~lg~g~~g~v~~~~~~~~~~~---~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e 83 (297)
T cd05089 7 EDVIGEGNFGQVIRAMIKKDGLK---MNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIE 83 (297)
T ss_pred eeeecCCCcceEEEEEecCCCCc---ceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEE
Confidence 45799999999999998765311 357888887543333447799999999999 79999999999999999999999
Q ss_pred cccCCcHHHHHhc-----------------------------------------c--cccccCCCCccccccCeEEecCC
Q 007935 426 FIRNGSLYAALHG-----------------------------------------F--GLNRLLPGTSKVTKNETIVTSGT 462 (584)
Q Consensus 426 y~~~GsL~~~L~~-----------------------------------------~--g~~~~~~~~~~i~~~~~~~~~~~ 462 (584)
|+++|+|.++++. . -|+++.+.|..+..+...+..++
T Consensus 84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~df 163 (297)
T cd05089 84 YAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIADF 163 (297)
T ss_pred ecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEECCc
Confidence 9999999877642 1 25667777777766666777777
Q ss_pred Cccc----------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC-C
Q 007935 463 GSRI----------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER-R 530 (584)
Q Consensus 463 ~~~~----------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~-~ 530 (584)
|... ...+..|+|||+... ..++.++|||||||++|||+| |+.||.... ...+........ .
T Consensus 164 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwSlG~il~el~t~g~~pf~~~~-----~~~~~~~~~~~~~~ 237 (297)
T cd05089 164 GLSRGEEVYVKKTMGRLPVRWMAIESLNY-SVYTTKSDVWSFGVLLWEIVSLGGTPYCGMT-----CAELYEKLPQGYRM 237 (297)
T ss_pred CCCccccceeccCCCCcCccccCchhhcc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHHhcCCCC
Confidence 6432 122456999998544 678999999999999999998 999997432 222333222211 1
Q ss_pred CCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 531 PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 531 ~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
..+..+++ .+.+++.+||+.+|.+|||++++++.|+.+.
T Consensus 238 ~~~~~~~~-------------~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~ 276 (297)
T cd05089 238 EKPRNCDD-------------EVYELMRQCWRDRPYERPPFAQISVQLSRML 276 (297)
T ss_pred CCCCCCCH-------------HHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 11222222 3456788899999999999999999998774
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.95 E-value=8e-27 Score=233.77 Aligned_cols=217 Identities=22% Similarity=0.290 Sum_probs=158.6
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
..+.||+|+||.||++.............||||+++........+.|.+|+++++++ +||||+++++++...+..++||
T Consensus 39 ~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 118 (302)
T cd05055 39 FGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILVIT 118 (302)
T ss_pred EcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceEEEE
Confidence 457899999999999986433222333689999998654444457899999999999 8999999999999999999999
Q ss_pred ecccCCcHHHHHhc---------------------------cc--ccccCCCCccccccCeEEecCCCccc---------
Q 007935 425 DFIRNGSLYAALHG---------------------------FG--LNRLLPGTSKVTKNETIVTSGTGSRI--------- 466 (584)
Q Consensus 425 Ey~~~GsL~~~L~~---------------------------~g--~~~~~~~~~~i~~~~~~~~~~~~~~~--------- 466 (584)
||+++|+|.++++. .+ |.++.+.|+.+..+...+..+++...
T Consensus 119 e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~ 198 (302)
T cd05055 119 EYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYV 198 (302)
T ss_pred EcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCcccccccCCCcee
Confidence 99999999877653 22 45566677666655666666665322
Q ss_pred ----ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCC--CccccChh
Q 007935 467 ----SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP--LSEVIDPA 539 (584)
Q Consensus 467 ----~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~d~~ 539 (584)
..++..|+|||++.. ..++.++|||||||++|||+| |..||...... .. .......... .+...+
T Consensus 199 ~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~----~~-~~~~~~~~~~~~~~~~~~-- 270 (302)
T cd05055 199 VKGNARLPVKWMAPESIFN-CVYTFESDVWSYGILLWEIFSLGSNPYPGMPVD----SK-FYKLIKEGYRMAQPEHAP-- 270 (302)
T ss_pred ecCCCCcccccCCHhhhcc-CCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCch----HH-HHHHHHcCCcCCCCCCCC--
Confidence 124567999998554 578999999999999999998 99998753221 11 1111111111 111122
Q ss_pred hhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhh
Q 007935 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581 (584)
Q Consensus 540 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 581 (584)
.++.+++.+||+.+|++|||+.|+++.|+++
T Consensus 271 -----------~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 271 -----------AEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred -----------HHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 2456688889999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.9e-27 Score=240.33 Aligned_cols=219 Identities=21% Similarity=0.315 Sum_probs=159.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeC-CceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYAN-DEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~-~~~~lV~ 424 (584)
.++||+|+||.||+|...+.+.....+.||+|+++........+.+.+|++++.++ +||||++++++|... ...+++|
T Consensus 12 ~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~~~v~ 91 (337)
T cd05054 12 GKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 91 (337)
T ss_pred hcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCEEEEE
Confidence 46799999999999987654433444789999998654444446788999999999 899999999988754 5688999
Q ss_pred ecccCCcHHHHHh-------------------------------------------------------------------
Q 007935 425 DFIRNGSLYAALH------------------------------------------------------------------- 437 (584)
Q Consensus 425 Ey~~~GsL~~~L~------------------------------------------------------------------- 437 (584)
||+++|+|.++++
T Consensus 92 ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 171 (337)
T cd05054 92 EYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLT 171 (337)
T ss_pred ecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhhcCCC
Confidence 9999999977653
Q ss_pred -------------------ccc--ccccCCCCccccccCeEEecCCCccc-------------ccCCCcccCccccccCC
Q 007935 438 -------------------GFG--LNRLLPGTSKVTKNETIVTSGTGSRI-------------SAISNVYLAPEARIYGS 483 (584)
Q Consensus 438 -------------------~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~-------------~~gt~~y~aPE~~~~~~ 483 (584)
+.| |+++.+.|+.+..+..++..++|... ..++..|||||++.. .
T Consensus 172 ~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~ 250 (337)
T cd05054 172 LEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFD-K 250 (337)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHHhcC-C
Confidence 222 46677777777766777777776432 134567999998554 6
Q ss_pred CCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccC
Q 007935 484 KFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTE 562 (584)
Q Consensus 484 ~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~ 562 (584)
.++.++|||||||++|||++ |+.||.+..... .+.. ....... ...+. ....++.+++.+||+
T Consensus 251 ~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~-~~~~----~~~~~~~--~~~~~---------~~~~~~~~l~~~cl~ 314 (337)
T cd05054 251 VYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE-EFCR----RLKEGTR--MRAPE---------YATPEIYSIMLDCWH 314 (337)
T ss_pred CCCccccHHHHHHHHHHHHHcCCCCCCCCCccH-HHHH----HHhccCC--CCCCc---------cCCHHHHHHHHHHcc
Confidence 89999999999999999998 999997532221 1111 1111110 00000 111346678899999
Q ss_pred CCCCCCCChHHHHHHHHhhh
Q 007935 563 LDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 563 ~~P~~RPt~~ev~~~L~~i~ 582 (584)
.+|++||++.|+++.|+++-
T Consensus 315 ~~p~~RPs~~ell~~l~~~~ 334 (337)
T cd05054 315 NNPEDRPTFSELVEILGDLL 334 (337)
T ss_pred CChhhCcCHHHHHHHHHHHH
Confidence 99999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.9e-27 Score=233.57 Aligned_cols=211 Identities=19% Similarity=0.282 Sum_probs=149.9
Q ss_pred eceeecCceEEEEEecCCC-------------------CCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceee
Q 007935 349 VVGKSKNGIMYKVVVGRGS-------------------GMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409 (584)
Q Consensus 349 ~iG~G~~g~Vy~~~~~~~~-------------------~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~ 409 (584)
.||+|+||.||+|.+...+ .......||+|.+..... ...++|.+|+.++++++|||||+
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~l~h~niv~ 80 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHR-DIALAFFETASLMSQVSHIHLAF 80 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHH-HHHHHHHHHHHHHhcCCCCCeee
Confidence 5899999999999864321 112235699999876432 23367899999999999999999
Q ss_pred eeEEEEeCCceeEeeecccCCcHHHHHh--------------------------ccc--ccccCCCCccccccC------
Q 007935 410 LKAFYYANDEKLLISDFIRNGSLYAALH--------------------------GFG--LNRLLPGTSKVTKNE------ 455 (584)
Q Consensus 410 l~g~~~~~~~~~lV~Ey~~~GsL~~~L~--------------------------~~g--~~~~~~~~~~i~~~~------ 455 (584)
++++|.+.+..++||||+++|+|..+++ +.| |+++++.|+.+...+
T Consensus 81 ~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~ 160 (274)
T cd05076 81 VHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTS 160 (274)
T ss_pred EEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCcc
Confidence 9999999999999999999999976653 223 566777776654321
Q ss_pred -eEEecCCCcc-------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHH-hCCCCCCCCCCCCCcHHHHHHHHh
Q 007935 456 -TIVTSGTGSR-------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEIL-TGRLPDAGPENDGKGLESLVRKAF 526 (584)
Q Consensus 456 -~~~~~~~~~~-------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ell-tG~~p~~~~~~~~~~l~~~~~~~~ 526 (584)
.++..+++.. ...++..|+|||.+..+..++.++|||||||++||++ +|+.||....... .... .
T Consensus 161 ~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~--~~~~----~ 234 (274)
T cd05076 161 PFIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE--KERF----Y 234 (274)
T ss_pred ceeeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH--HHHH----H
Confidence 2344555432 2346788999998655457899999999999999995 7999987532211 1111 1
Q ss_pred hcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHH
Q 007935 527 RERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579 (584)
Q Consensus 527 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~ 579 (584)
......+....+ .+.+++.+||+.+|++||||.+|++.|.
T Consensus 235 ~~~~~~~~~~~~-------------~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 235 EKKHRLPEPSCK-------------ELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred HhccCCCCCCCh-------------HHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 111112221222 3456888899999999999999998873
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.7e-27 Score=239.88 Aligned_cols=206 Identities=16% Similarity=0.266 Sum_probs=154.2
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
+.||+|+||.||+|+...++ +.||+|+++... .....+.+.+|+.++.++ +||||+++++++.+.+..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~ 75 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKND-----QIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVI 75 (327)
T ss_pred CeeeeCCCeEEEEEEECCCC-----CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEE
Confidence 36999999999999988776 899999998642 223346788999999998 6999999999999999999999
Q ss_pred ecccCCcHHHHH-------------------------hccc--ccccCCCCccccccCeEEecCCCcc-----------c
Q 007935 425 DFIRNGSLYAAL-------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSR-----------I 466 (584)
Q Consensus 425 Ey~~~GsL~~~L-------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~-----------~ 466 (584)
||+++|+|..++ |..| |+++++.|+.+..++.++..++|.. .
T Consensus 76 e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~ 155 (327)
T cd05617 76 EYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTST 155 (327)
T ss_pred eCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceec
Confidence 999999996554 3333 6778888887777777777777632 2
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCC-CCcHHHHH-HHHhhcCCCCccccChhhhhhh
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEND-GKGLESLV-RKAFRERRPLSEVIDPALVKEI 544 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~-~~~l~~~~-~~~~~~~~~~~~~~d~~~~~~~ 544 (584)
..||+.|+|||++. +..++.++|||||||++|||+||+.||...... ........ .........++..+++.+
T Consensus 156 ~~gt~~y~aPE~~~-~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~---- 230 (327)
T cd05617 156 FCGTPNYIAPEILR-GEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPRFLSVKA---- 230 (327)
T ss_pred ccCCcccCCHHHHC-CCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCCCCCCHHH----
Confidence 35899999999955 468899999999999999999999999643221 11222222 222222223333344333
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChH
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRMR 572 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ 572 (584)
.+++.+||+.||++|+++.
T Consensus 231 ---------~~li~~~L~~dP~~R~~~~ 249 (327)
T cd05617 231 ---------SHVLKGFLNKDPKERLGCQ 249 (327)
T ss_pred ---------HHHHHHHhccCHHHcCCCC
Confidence 4567779999999999853
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.2e-27 Score=228.71 Aligned_cols=208 Identities=26% Similarity=0.399 Sum_probs=156.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|++|.||+|...++ +.||+|.++.... ..++|.+|++++++++||||+++++++...+..++||||
T Consensus 11 ~~~lg~g~~~~v~~~~~~~~------~~v~iK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05068 11 LRKLGAGQFGEVWEGLWNNT------TPVAVKTLKPGTM--DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTEL 82 (261)
T ss_pred EEEecccCCccEEEEEecCC------eEEEEEeeCCCcc--cHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeec
Confidence 46899999999999997665 7899999976432 237899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc---------------------------c--cccccCCCCccccccCeEEecCCCcccc---------c
Q 007935 427 IRNGSLYAALHG---------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRIS---------A 468 (584)
Q Consensus 427 ~~~GsL~~~L~~---------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~~---------~ 468 (584)
+++|+|.+++.. . .|+++.+.|+.+..++.++..+++.... .
T Consensus 83 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 162 (261)
T cd05068 83 MKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEARE 162 (261)
T ss_pred ccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccC
Confidence 999999877642 2 3566777777777777677777653321 1
Q ss_pred C---CCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC-CCCccccChhhhhh
Q 007935 469 I---SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER-RPLSEVIDPALVKE 543 (584)
Q Consensus 469 g---t~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~d~~~~~~ 543 (584)
| +..|+|||+.. +..++.++||||||+++|||+| |+.||.+.. ............ .+.....
T Consensus 163 ~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~------- 229 (261)
T cd05068 163 GAKFPIKWTAPEAAL-YNRFSIKSDVWSFGILLTEIVTYGRMPYPGMT-----NAEVLQQVDQGYRMPCPPGC------- 229 (261)
T ss_pred CCcCceeccCccccc-cCCCCchhhHHHHHHHHHHHHhcCCCCCCCCC-----HHHHHHHHHcCCCCCCCCcC-------
Confidence 2 34699999854 4678999999999999999999 999986422 122222221111 1111111
Q ss_pred hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhh
Q 007935 544 IHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581 (584)
Q Consensus 544 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 581 (584)
...+.+++.+|++.+|++||++.++.+.|+++
T Consensus 230 ------~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 230 ------PKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred ------CHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 13456788899999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=5e-28 Score=244.45 Aligned_cols=205 Identities=23% Similarity=0.338 Sum_probs=152.4
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
+.||+|+||.||+++...+. ..++.||+|+++... .......+.+|++++++++|||||++++++.+++..|+||||
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 79 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGP--DAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDF 79 (318)
T ss_pred ceeeeCCCEEEEEEEEeccC--CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcC
Confidence 46999999999999864321 112799999997642 222235678899999999999999999999999999999999
Q ss_pred ccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCcc-----------ccc
Q 007935 427 IRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR-----------ISA 468 (584)
Q Consensus 427 ~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~~ 468 (584)
+++|+|.++++ +. -|+++.+.|+.+..++.++..++|.. ...
T Consensus 80 ~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~ 159 (318)
T cd05582 80 LRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC 159 (318)
T ss_pred CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceeccc
Confidence 99999976654 22 35667777777776777777776532 135
Q ss_pred CCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHH
Q 007935 469 ISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKR 548 (584)
Q Consensus 469 gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 548 (584)
||..|+|||++.. ..++.++|||||||++|||+||+.||.... ..............++..+++.+
T Consensus 160 g~~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tg~~p~~~~~-----~~~~~~~i~~~~~~~p~~~~~~~-------- 225 (318)
T cd05582 160 GTVEYMAPEVVNR-RGHTQSADWWSFGVLMFEMLTGSLPFQGKD-----RKETMTMILKAKLGMPQFLSPEA-------- 225 (318)
T ss_pred CChhhcCHHHHcC-CCCCCccceeccceEeeeeccCCCCCCCCC-----HHHHHHHHHcCCCCCCCCCCHHH--------
Confidence 7889999998544 678999999999999999999999997422 23333333333333344444443
Q ss_pred HHHHHHHHHhcccCCCCCCCCChHH
Q 007935 549 QVLATFHIALNCTELDPEFRPRMRT 573 (584)
Q Consensus 549 ~~~~~~~l~~~Cl~~~P~~RPt~~e 573 (584)
.+++.+||+.||++||++.+
T Consensus 226 -----~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 226 -----QSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred -----HHHHHHHhhcCHhHcCCCCC
Confidence 34667799999999999655
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.8e-27 Score=232.60 Aligned_cols=218 Identities=23% Similarity=0.331 Sum_probs=162.1
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
..+.||+|+||.||++.............||+|.+..........++.+|++++.++ +||||+++++++..++..++||
T Consensus 16 ~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~li~ 95 (293)
T cd05053 16 LGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVV 95 (293)
T ss_pred EeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEEEE
Confidence 346799999999999998654333334789999998654444456799999999999 8999999999999999999999
Q ss_pred ecccCCcHHHHHhc-----------------------------------------c--cccccCCCCccccccCeEEecC
Q 007935 425 DFIRNGSLYAALHG-----------------------------------------F--GLNRLLPGTSKVTKNETIVTSG 461 (584)
Q Consensus 425 Ey~~~GsL~~~L~~-----------------------------------------~--g~~~~~~~~~~i~~~~~~~~~~ 461 (584)
||+++|+|.++++. . -|+++.+.|+.+..+..++..+
T Consensus 96 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~~~~kL~D 175 (293)
T cd05053 96 EYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTEDHVMKIAD 175 (293)
T ss_pred EeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCCCeEEeCc
Confidence 99999999877642 1 2466677777776667777777
Q ss_pred CCccc-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhh
Q 007935 462 TGSRI-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFR 527 (584)
Q Consensus 462 ~~~~~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~ 527 (584)
++... ..++..|+|||++.. ..++.++|||||||++|||++ |..||... ...+.......
T Consensus 176 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~-----~~~~~~~~~~~ 249 (293)
T cd05053 176 FGLARDIHHIDYYRKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLLWEIFTLGGSPYPGI-----PVEELFKLLKE 249 (293)
T ss_pred cccccccccccceeccCCCCCCccccCHHHhcc-CCcCcccceeehhhHHHHHhcCCCCCCCCC-----CHHHHHHHHHc
Confidence 66332 123457999998544 678999999999999999998 99998642 22222222221
Q ss_pred cCC-CCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 528 ERR-PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 528 ~~~-~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
... ..+.. ....+.+++.+||..||++|||+.|+++.|+++-
T Consensus 250 ~~~~~~~~~-------------~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 250 GYRMEKPQN-------------CTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred CCcCCCCCC-------------CCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 111 11111 1224567888999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.4e-27 Score=228.04 Aligned_cols=209 Identities=20% Similarity=0.264 Sum_probs=152.4
Q ss_pred ceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeecccC
Q 007935 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRN 429 (584)
Q Consensus 350 iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~ 429 (584)
||+|+||.||+|.+.... ....||+|.+.........+.|.+|+.++++++||||+++++++. .+..++||||+++
T Consensus 3 ig~G~~g~v~~~~~~~~~---~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~ 78 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRK---KQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASG 78 (257)
T ss_pred cCCCCcccEEEEEEecCC---CceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCC
Confidence 899999999999875321 115799999977544444577999999999999999999999885 4578999999999
Q ss_pred CcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc--------------c
Q 007935 430 GSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI--------------S 467 (584)
Q Consensus 430 GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~--------------~ 467 (584)
|+|.++++. . -|.++.+.|+.+..+...+..++|... .
T Consensus 79 ~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 158 (257)
T cd05115 79 GPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAG 158 (257)
T ss_pred CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCC
Confidence 999877742 2 256677777766666666666665321 1
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCC-CCccccChhhhhhhh
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERR-PLSEVIDPALVKEIH 545 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~d~~~~~~~~ 545 (584)
.++..|+|||++.. ..++.++|||||||++||+++ |+.||..... ..+......... ..+...+
T Consensus 159 ~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~-------- 224 (257)
T cd05115 159 KWPLKWYAPECINF-RKFSSRSDVWSYGITMWEAFSYGQKPYKKMKG-----PEVMSFIEQGKRLDCPAECP-------- 224 (257)
T ss_pred CCCcccCCHHHHcc-CCCCchhhHHHHHHHHHHHhcCCCCCcCcCCH-----HHHHHHHHCCCCCCCCCCCC--------
Confidence 22467999998554 678999999999999999997 9999975321 222222222111 1111222
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhh
Q 007935 546 AKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 581 (584)
.++.+++.+||..+|++||++.+|.+.|+.+
T Consensus 225 -----~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 225 -----PEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred -----HHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 2445678889999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=7e-28 Score=239.88 Aligned_cols=207 Identities=20% Similarity=0.307 Sum_probs=160.0
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCC--CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG--DATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
+.||.|+||.||-|+...+. ..||||++.-. .....-.+++.|+..|.+++|||+|.+.|+|..+...|||||
T Consensus 32 rEIGHGSFGAVYfArd~~n~-----evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 32 REIGHGSFGAVYFARDVRNS-----EVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHhcCCccceeEEeeccCcc-----ceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 45999999999999998876 89999999765 222233679999999999999999999999999999999999
Q ss_pred cccCCcH--------------------------HHHHhc--ccccccCCCCccccccCeEEecCCCccc-------ccCC
Q 007935 426 FIRNGSL--------------------------YAALHG--FGLNRLLPGTSKVTKNETIVTSGTGSRI-------SAIS 470 (584)
Q Consensus 426 y~~~GsL--------------------------~~~L~~--~g~~~~~~~~~~i~~~~~~~~~~~~~~~-------~~gt 470 (584)
||-| |- ..|||. ..|+|++++|+.+...+.++..|||+.. .+||
T Consensus 107 YClG-SAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAnsFvGT 185 (948)
T KOG0577|consen 107 YCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPANSFVGT 185 (948)
T ss_pred HHhc-cHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcCchhcccCC
Confidence 9965 43 244544 3589999999998888999999998643 5899
Q ss_pred CcccCccccc--cCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHH
Q 007935 471 NVYLAPEARI--YGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKR 548 (584)
Q Consensus 471 ~~y~aPE~~~--~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 548 (584)
+.|||||+++ ..+.|+-|+||||+|++..||.-.++|+..+. .+..+ ..+.....| ..-.+++..
T Consensus 186 PywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMN----AMSAL-YHIAQNesP--tLqs~eWS~------ 252 (948)
T KOG0577|consen 186 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN----AMSAL-YHIAQNESP--TLQSNEWSD------ 252 (948)
T ss_pred ccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCch----HHHHH-HHHHhcCCC--CCCCchhHH------
Confidence 9999999863 34689999999999999999999999976421 12222 122222211 112333322
Q ss_pred HHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 549 QVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 549 ~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++..|+++-|.+|||..++++
T Consensus 253 ---~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 253 ---YFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred ---HHHHHHHHHHhhCcccCCcHHHHhh
Confidence 3455777899999999999999875
|
|
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.7e-27 Score=231.77 Aligned_cols=215 Identities=22% Similarity=0.311 Sum_probs=159.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|....+......+.||+|+++........+.|.+|+.++++++|||||++++++.+.+..++++||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~e~ 89 (283)
T cd05091 10 MEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMIFSY 89 (283)
T ss_pred HHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEEEEc
Confidence 35699999999999998654333334789999998654433446789999999999999999999999999999999999
Q ss_pred ccCCcHHHHHh-----------------------------------------cc--cccccCCCCccccccCeEEecCCC
Q 007935 427 IRNGSLYAALH-----------------------------------------GF--GLNRLLPGTSKVTKNETIVTSGTG 463 (584)
Q Consensus 427 ~~~GsL~~~L~-----------------------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~ 463 (584)
+++++|.+++. +. -|+++++.|+.+..+..++..++|
T Consensus 90 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~kl~Dfg 169 (283)
T cd05091 90 CSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVKISDLG 169 (283)
T ss_pred CCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCCceEecccc
Confidence 99999877763 11 356677777777666667777776
Q ss_pred ccc-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC
Q 007935 464 SRI-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER 529 (584)
Q Consensus 464 ~~~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~ 529 (584)
... ..+++.|+|||++.. ..++.++|||||||++|||+| |..||.+. ...++........
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~~g~~p~~~~-----~~~~~~~~i~~~~ 243 (283)
T cd05091 170 LFREVYAADYYKLMGNSLLPIRWMSPEAIMY-GKFSIDSDIWSYGVVLWEVFSYGLQPYCGY-----SNQDVIEMIRNRQ 243 (283)
T ss_pred cccccccchheeeccCccCCccccCHHHHhc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHHHcCC
Confidence 321 234568999999654 578999999999999999998 88888642 2223333332222
Q ss_pred C-CCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHh
Q 007935 530 R-PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580 (584)
Q Consensus 530 ~-~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 580 (584)
. +.+... ...+.+++..||+.+|++||+++||++.|+.
T Consensus 244 ~~~~~~~~-------------~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 244 VLPCPDDC-------------PAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred cCCCCCCC-------------CHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 1 111111 1235568888999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.9e-27 Score=230.65 Aligned_cols=208 Identities=19% Similarity=0.259 Sum_probs=162.7
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcch-------------hhHhHHHHHHHHHhcCCCceeeeeEEE
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATW-------------RFKDFESEVEAIARVQHPNIVRLKAFY 414 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~-------------~~~~f~~Ei~~l~~l~HpnIV~l~g~~ 414 (584)
..||+|.||.|-+|+....+ +.||||++.+..-.. ..+...+||.+|++++|||||+|+++.
T Consensus 103 ~eiG~G~yGkVkLar~~~~~-----~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEvL 177 (576)
T KOG0585|consen 103 KEIGSGQYGKVKLARDEVDG-----KLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEVL 177 (576)
T ss_pred hhhcCCccceEEEEeecCCC-----cEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEee
Confidence 46999999999999988776 899999997641110 125788999999999999999999998
Q ss_pred EeC--CceeEeeecccCCcH-------------------------HHHHhccc--ccccCCCCccccccCeEEecCCCcc
Q 007935 415 YAN--DEKLLISDFIRNGSL-------------------------YAALHGFG--LNRLLPGTSKVTKNETIVTSGTGSR 465 (584)
Q Consensus 415 ~~~--~~~~lV~Ey~~~GsL-------------------------~~~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~ 465 (584)
.+. +..|||+|||..|.+ .+|||..| |+|+++.|.++..++.+++.|||..
T Consensus 178 DDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VKIsDFGVs 257 (576)
T KOG0585|consen 178 DDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVKISDFGVS 257 (576)
T ss_pred cCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEEeecccee
Confidence 764 579999999999976 47777665 7999999999999999999888743
Q ss_pred c----------------ccCCCcccCccccccCC---CCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHh
Q 007935 466 I----------------SAISNVYLAPEARIYGS---KFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF 526 (584)
Q Consensus 466 ~----------------~~gt~~y~aPE~~~~~~---~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~ 526 (584)
. ..||+.|||||....+. ..+.+.||||+||+||.|+.|+.||.+ ....++..++.
T Consensus 258 ~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~-----~~~~~l~~KIv 332 (576)
T KOG0585|consen 258 NEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFD-----DFELELFDKIV 332 (576)
T ss_pred eecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCccc-----chHHHHHHHHh
Confidence 3 37999999999865532 345789999999999999999999974 33455556665
Q ss_pred hcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 527 RERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 527 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.....+++. ++ ....+-+|++++|++||++|.+..+|..
T Consensus 333 n~pL~fP~~--pe---------~~e~~kDli~~lL~KdP~~Ri~l~~ik~ 371 (576)
T KOG0585|consen 333 NDPLEFPEN--PE---------INEDLKDLIKRLLEKDPEQRITLPDIKL 371 (576)
T ss_pred cCcccCCCc--cc---------ccHHHHHHHHHHhhcChhheeehhhhee
Confidence 544333222 11 1223455788899999999999998854
|
|
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.2e-27 Score=237.96 Aligned_cols=219 Identities=22% Similarity=0.327 Sum_probs=157.5
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeC-CceeEe
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYAN-DEKLLI 423 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~-~~~~lV 423 (584)
..+.||+|+||.||+|.....+.....+.||||+++........+.+.+|+.++.++ +|||||+++++|... ...++|
T Consensus 11 ~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv 90 (343)
T cd05103 11 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 90 (343)
T ss_pred ccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCceEEE
Confidence 456799999999999986543333334799999998654444456789999999999 789999999988764 457899
Q ss_pred eecccCCcHHHHHhc-----------------------------------------------------------------
Q 007935 424 SDFIRNGSLYAALHG----------------------------------------------------------------- 438 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~~----------------------------------------------------------------- 438 (584)
|||+++|+|.++++.
T Consensus 91 ~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (343)
T cd05103 91 VEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQED 170 (343)
T ss_pred EeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhhhhh
Confidence 999999999877642
Q ss_pred ---------------------------c--cccccCCCCccccccCeEEecCCCccc-------------ccCCCcccCc
Q 007935 439 ---------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI-------------SAISNVYLAP 476 (584)
Q Consensus 439 ---------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~-------------~~gt~~y~aP 476 (584)
. -|+++.+.|+.+..+..++..+++... ..++..|+||
T Consensus 171 ~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP 250 (343)
T cd05103 171 LYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP 250 (343)
T ss_pred hhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcceECc
Confidence 1 245566666666656666666665322 1235679999
Q ss_pred cccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhc-CCCCccccChhhhhhhhHHHHHHHHH
Q 007935 477 EARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRE-RRPLSEVIDPALVKEIHAKRQVLATF 554 (584)
Q Consensus 477 E~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~ 554 (584)
|++.. ..++.++|||||||++|||++ |..||...... .......... ....+...++ ++.
T Consensus 251 E~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-------------~~~ 312 (343)
T cd05103 251 ETIFD-RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EEFCRRLKEGTRMRAPDYTTP-------------EMY 312 (343)
T ss_pred HHhcC-CCCCchhhHHHHHHHHHHHHHCCCCCCCCcccc----HHHHHHHhccCCCCCCCCCCH-------------HHH
Confidence 98544 678999999999999999997 99998753221 1111111111 1111222222 356
Q ss_pred HHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 555 HIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 555 ~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
+++.+||+.||++|||+.||++.|+.+-
T Consensus 313 ~~~~~cl~~~p~~Rps~~eil~~l~~~~ 340 (343)
T cd05103 313 QTMLDCWHGEPSQRPTFSELVEHLGNLL 340 (343)
T ss_pred HHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 6888899999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.3e-27 Score=234.58 Aligned_cols=210 Identities=20% Similarity=0.223 Sum_probs=152.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.++||+|+||.||++.....+ +.||||.+.... .....+.+.+|+.++++++|||||++++++.+++..++||
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (285)
T cd05605 5 YRVLGKGGFGEVCACQVRATG-----KMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVL 79 (285)
T ss_pred EEEEecCCCeEEEEEEEcCCC-----ceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEE
Confidence 357999999999999987655 799999997542 1222356789999999999999999999999999999999
Q ss_pred ecccCCcHHHHHh---------------------------ccc--ccccCCCCccccccCeEEecCCCccc---------
Q 007935 425 DFIRNGSLYAALH---------------------------GFG--LNRLLPGTSKVTKNETIVTSGTGSRI--------- 466 (584)
Q Consensus 425 Ey~~~GsL~~~L~---------------------------~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~--------- 466 (584)
||+++|+|.++++ +.| |+++.+.|+.+..+..+...+++...
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 159 (285)
T cd05605 80 TLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIR 159 (285)
T ss_pred eccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCccc
Confidence 9999999976653 222 45666666666555666666665322
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIH 545 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~ 545 (584)
..|+..|+|||++.. ..++.++|||||||++|||++|+.||.+.... .....+...........+..+++
T Consensus 160 ~~~~~~~y~aPE~~~~-~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~------- 230 (285)
T cd05605 160 GRVGTVGYMAPEVVKN-ERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEK-VKREEVERRVKEDQEEYSEKFSE------- 230 (285)
T ss_pred cccCCCCccCcHHhcC-CCCCccccchhHHHHHHHHHHCCCCCCCCchh-hHHHHHHHHhhhcccccCcccCH-------
Confidence 357889999999654 67899999999999999999999999753221 11112222211111112222222
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCC-----ChHHHHH
Q 007935 546 AKRQVLATFHIALNCTELDPEFRP-----RMRTVSE 576 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RP-----t~~ev~~ 576 (584)
.+.+++.+||+.||++|| ++.++++
T Consensus 231 ------~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 231 ------AARSICRQLLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred ------HHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence 344577889999999999 7778754
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-27 Score=240.51 Aligned_cols=201 Identities=19% Similarity=0.263 Sum_probs=150.8
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHH-HHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVE-AIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~-~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
++||+|+||.||+|+....+ +.||+|.+.... .....+.+.+|.. +++.++|||||++++++.+.+..++||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 75 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDG-----SFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVL 75 (321)
T ss_pred CeeeeCCCEEEEEEEECCCC-----CEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEE
Confidence 36999999999999987765 799999997542 2222355666665 578899999999999999999999999
Q ss_pred ecccCCcHHHHH-------------------------hccc--ccccCCCCccccccCeEEecCCCccc-----------
Q 007935 425 DFIRNGSLYAAL-------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSRI----------- 466 (584)
Q Consensus 425 Ey~~~GsL~~~L-------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~----------- 466 (584)
||+++|+|..++ |+.| |+++++.|+.+..++.++..++|...
T Consensus 76 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 155 (321)
T cd05603 76 DYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTST 155 (321)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCcccc
Confidence 999999996544 4333 57788888888777778877776321
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhH
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 546 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 546 (584)
..||+.|+|||++. +..++.++|||||||++|||++|+.||... +...+..........++...+.
T Consensus 156 ~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~el~~g~~pf~~~-----~~~~~~~~i~~~~~~~~~~~~~-------- 221 (321)
T cd05603 156 FCGTPEYLAPEVLR-KEPYDRTVDWWCLGAVLYEMLYGLPPFYSR-----DVSQMYDNILHKPLQLPGGKTV-------- 221 (321)
T ss_pred ccCCcccCCHHHhc-CCCCCCcCcccccchhhhhhhcCCCCCCCC-----CHHHHHHHHhcCCCCCCCCCCH--------
Confidence 35789999999954 467899999999999999999999999742 2333333333333222222222
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCChH
Q 007935 547 KRQVLATFHIALNCTELDPEFRPRMR 572 (584)
Q Consensus 547 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ 572 (584)
.+.+++.+|++.||.+||++.
T Consensus 222 -----~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 222 -----AACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred -----HHHHHHHHHccCCHhhcCCCC
Confidence 345677789999999999764
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.7e-27 Score=234.15 Aligned_cols=221 Identities=23% Similarity=0.339 Sum_probs=155.6
Q ss_pred eeceeecCceEEEEEecCCCC---------CCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCC
Q 007935 348 YVVGKSKNGIMYKVVVGRGSG---------MGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAND 418 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~---------~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~ 418 (584)
+.||+|+||.||++.....+. ......||+|.++........+.|.+|++++++++||||+++++++...+
T Consensus 11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~ 90 (295)
T cd05097 11 EKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSDD 90 (295)
T ss_pred hccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEcCCC
Confidence 569999999999998754321 12235699999986544444567999999999999999999999999999
Q ss_pred ceeEeeecccCCcHHHHHh-------------------------------------ccc--ccccCCCCccccccCeEEe
Q 007935 419 EKLLISDFIRNGSLYAALH-------------------------------------GFG--LNRLLPGTSKVTKNETIVT 459 (584)
Q Consensus 419 ~~~lV~Ey~~~GsL~~~L~-------------------------------------~~g--~~~~~~~~~~i~~~~~~~~ 459 (584)
..++||||+++|+|.++++ +.| |+++.+.|..+..+..++.
T Consensus 91 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~~~~~kl 170 (295)
T cd05097 91 PLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNHYTIKI 170 (295)
T ss_pred ccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcCCCcEEe
Confidence 9999999999999876653 223 5666777777766666666
Q ss_pred cCCCccc-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh--CCCCCCCCCCCCCcHHHHHHH
Q 007935 460 SGTGSRI-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT--GRLPDAGPENDGKGLESLVRK 524 (584)
Q Consensus 460 ~~~~~~~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt--G~~p~~~~~~~~~~l~~~~~~ 524 (584)
.+++... ..++..|+|||+... ..++.++|||||||++|||++ |..||.....+ ........
T Consensus 171 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~--~~~~~~~~ 247 (295)
T cd05097 171 ADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILL-GKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDE--QVIENTGE 247 (295)
T ss_pred cccccccccccCcceeccCcCcCceeecChhhhcc-CCcCchhhHHHHHHHHHHHHHcCCCCCCcccChH--HHHHHHHH
Confidence 6665321 123567999998554 578999999999999999998 56777642211 11111111
Q ss_pred Hhhc-CCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHh
Q 007935 525 AFRE-RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580 (584)
Q Consensus 525 ~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 580 (584)
.... .........+. ....+.+++.+||+.||++||||.+|++.|++
T Consensus 248 ~~~~~~~~~~~~~~~~---------~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 248 FFRNQGRQIYLSQTPL---------CPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred hhhhccccccCCCCCC---------CCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 1111 01000000111 11256778999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.1e-27 Score=227.54 Aligned_cols=206 Identities=19% Similarity=0.273 Sum_probs=155.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC-CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|++|.||+|....++ +.|++|.+... ......+++.+|++++++++||||+++++++.+++..++|||
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~-----~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08529 5 LNKIGKGSFGVVFKVVRKADK-----RVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVME 79 (256)
T ss_pred eEEecCCCCeEEEEEEEcCCC-----cEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEE
Confidence 467999999999999987765 78999998754 233345789999999999999999999999999999999999
Q ss_pred cccCCcHHHHHhcc-----------------------------cccccCCCCccccccCeEEecCCCcc-----------
Q 007935 426 FIRNGSLYAALHGF-----------------------------GLNRLLPGTSKVTKNETIVTSGTGSR----------- 465 (584)
Q Consensus 426 y~~~GsL~~~L~~~-----------------------------g~~~~~~~~~~i~~~~~~~~~~~~~~----------- 465 (584)
|+++++|.++++.. -|+++.+.|+.+..+...+..+++..
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~ 159 (256)
T cd08529 80 YAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFAN 159 (256)
T ss_pred eCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCccchhh
Confidence 99999998777531 24566667766666666666665422
Q ss_pred cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcC-CCCccccChhhhhhh
Q 007935 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER-RPLSEVIDPALVKEI 544 (584)
Q Consensus 466 ~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~d~~~~~~~ 544 (584)
...|+..|+|||+... ..++.++|||||||++|||+||+.||.... -........... .++...+++
T Consensus 160 ~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~------ 227 (256)
T cd08529 160 TIVGTPYYLSPELCED-KPYNEKSDVWALGVVLYECCTGKHPFDANN-----QGALILKIIRGVFPPVSQMYSQ------ 227 (256)
T ss_pred ccccCccccCHHHhcC-CCCCCccchHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHcCCCCCCccccCH------
Confidence 1257788999999654 578999999999999999999999997432 122222222221 112222222
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||+.+|++||++.++++
T Consensus 228 -------~~~~~i~~~l~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 228 -------QLAQLIDQCLTKDYRQRPDTFQLLR 252 (256)
T ss_pred -------HHHHHHHHHccCCcccCcCHHHHhh
Confidence 4456788899999999999999986
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.8e-27 Score=228.16 Aligned_cols=206 Identities=21% Similarity=0.344 Sum_probs=153.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|...+. ..||||.+...... .++|.+|+.++.+++||||+++++++.+.+..++||||
T Consensus 9 ~~~lg~G~~~~vy~~~~~~~------~~~aik~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd05113 9 LKELGTGQFGVVKYGKWRGQ------YDVAIKMIKEGSMS--EDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEY 80 (256)
T ss_pred eeEecCcccceEEEEEecCC------CcEEEEEcCCCccc--HHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEc
Confidence 35799999999999987664 57999998754322 36799999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc------------
Q 007935 427 IRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI------------ 466 (584)
Q Consensus 427 ~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~------------ 466 (584)
+++|+|.++++. . -|+++.+.|..+..+..++..+++...
T Consensus 81 ~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~ 160 (256)
T cd05113 81 MSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVG 160 (256)
T ss_pred CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCceeecCC
Confidence 999999777642 2 356667777777666666666665322
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCC-CccccChhhhhhh
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP-LSEVIDPALVKEI 544 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~d~~~~~~~ 544 (584)
..++..|+|||+... ..++.++|||||||++|||+| |+.||..... ............. .....+
T Consensus 161 ~~~~~~y~~pe~~~~-~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~------- 227 (256)
T cd05113 161 SKFPVRWSPPEVLLY-SKFSSKSDVWAFGVLMWEVYSLGKMPYERFNN-----SETVEKVSQGLRLYRPHLAS------- 227 (256)
T ss_pred CccChhhCCHHHHhc-CcccchhHHHHHHHHHHHHhcCCCCCcCcCCH-----HHHHHHHhcCCCCCCCCCCC-------
Confidence 124457999998544 578999999999999999999 9999864221 2222222222211 111111
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHH
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~ 579 (584)
..+.+++.+||+.+|.+||++.++++.|+
T Consensus 228 ------~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 228 ------EKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred ------HHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 24566888899999999999999998774
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-26 Score=227.05 Aligned_cols=213 Identities=24% Similarity=0.313 Sum_probs=155.9
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeecc
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 427 (584)
+.||+|+||.||+|+.....+ ....||+|.+.........+++.+|++++++++|||||++++++. .+..++||||+
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~--~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~ 77 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSG--KEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELA 77 (257)
T ss_pred CccCccCceeEEEeEeeccCC--CcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeC
Confidence 369999999999998755432 226899999987644334578999999999999999999999875 55789999999
Q ss_pred cCCcHHHHHhc-------------------------c--cccccCCCCccccccCeEEecCCCccc--------------
Q 007935 428 RNGSLYAALHG-------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI-------------- 466 (584)
Q Consensus 428 ~~GsL~~~L~~-------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~-------------- 466 (584)
++|+|.++++. . -|+++.+.|..+..+..++..+++...
T Consensus 78 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~ 157 (257)
T cd05060 78 PLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTA 157 (257)
T ss_pred CCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccccC
Confidence 99999877743 2 356677777777666666666654321
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCC-CCccccChhhhhhh
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERR-PLSEVIDPALVKEI 544 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~d~~~~~~~ 544 (584)
..++..|+|||... +..++.++|||||||++|||++ |+.||..... .+.......... +.+..++
T Consensus 158 ~~~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~------- 224 (257)
T cd05060 158 GRWPLKWYAPECIN-YGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG-----AEVIAMLESGERLPRPEECP------- 224 (257)
T ss_pred ccccccccCHHHhc-CCCCCccchHHHHHHHHHHHHcCCCCCcccCCH-----HHHHHHHHcCCcCCCCCCCC-------
Confidence 11235799999854 4678999999999999999998 9999875321 222222211111 1111121
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
..+.+++.+||..+|++||++.++++.|+++.
T Consensus 225 ------~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 225 ------QEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred ------HHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 24556888899999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.3e-27 Score=229.74 Aligned_cols=217 Identities=19% Similarity=0.275 Sum_probs=160.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC--CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG--DATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|....++ +.||+|.++.. ......+.+.+|++++++++|+||+++++++.+.+..++||
T Consensus 7 ~~~lg~g~~~~v~~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 7 EKKIGKGQFSVVYKAICLLDG-----RVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred eeeeccCCceEEEEEEEcCCC-----CEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 457999999999999998555 78999988643 22233578999999999999999999999999999999999
Q ss_pred ecccCCcHHHHHhc-----------------------------cc--ccccCCCCccccccCeEEecCCCcc--------
Q 007935 425 DFIRNGSLYAALHG-----------------------------FG--LNRLLPGTSKVTKNETIVTSGTGSR-------- 465 (584)
Q Consensus 425 Ey~~~GsL~~~L~~-----------------------------~g--~~~~~~~~~~i~~~~~~~~~~~~~~-------- 465 (584)
||+++|+|.+++.. .| |+++.+.|+.+..++..+..+++..
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~ 161 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 161 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCCc
Confidence 99999999776632 22 4566666766666666666665422
Q ss_pred ---cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhh
Q 007935 466 ---ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVK 542 (584)
Q Consensus 466 ---~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~ 542 (584)
...++..|+|||++. +..++.++|||||||++|||++|+.||.... .....+......... .....+
T Consensus 162 ~~~~~~~~~~y~apE~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---~~~~~~~~~~~~~~~--~~~~~~---- 231 (267)
T cd08224 162 AAHSLVGTPYYMSPERIH-ENGYNFKSDIWSLGCLLYEMAALQSPFYGDK---MNLYSLCKKIEKCDY--PPLPAD---- 231 (267)
T ss_pred ccceecCCccccCHHHhc-cCCCCchhcHHHHHHHHHHHHHCCCCcccCC---ccHHHHHhhhhcCCC--CCCChh----
Confidence 135778899999854 4678999999999999999999999986432 223333322221111 111000
Q ss_pred hhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 543 EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 543 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
.....+.+++.+||..+|++|||+.+|+++|++++.
T Consensus 232 -----~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~~ 267 (267)
T cd08224 232 -----HYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMHA 267 (267)
T ss_pred -----hcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhcC
Confidence 112245568888999999999999999999999863
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-26 Score=227.23 Aligned_cols=210 Identities=20% Similarity=0.264 Sum_probs=152.0
Q ss_pred eceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeecc
Q 007935 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (584)
Q Consensus 349 ~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 427 (584)
.||+|+||.||+|.+.... ....||+|+++... .....++|.+|+.++++++||||++++|++. .+..++||||+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~ 77 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKK---SEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELA 77 (257)
T ss_pred cCCCcCCcceEEeEEecCC---CceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecC
Confidence 5899999999999764221 11789999987543 2234578999999999999999999999885 55779999999
Q ss_pred cCCcHHHHHh-------------------------ccc--ccccCCCCccccccCeEEecCCCccc--------------
Q 007935 428 RNGSLYAALH-------------------------GFG--LNRLLPGTSKVTKNETIVTSGTGSRI-------------- 466 (584)
Q Consensus 428 ~~GsL~~~L~-------------------------~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~-------------- 466 (584)
++|+|.+++. +.| |+++.+.|..+..+..++..+++...
T Consensus 78 ~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 157 (257)
T cd05116 78 ELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTH 157 (257)
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCC
Confidence 9999976663 333 56677777777666666666665321
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhc-CCCCccccChhhhhhh
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRE-RRPLSEVIDPALVKEI 544 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~d~~~~~~~ 544 (584)
..++..|+|||.+. +..++.++|||||||++|||+| |+.||..... ..+....... ..+.+...++
T Consensus 158 ~~~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-----~~~~~~i~~~~~~~~~~~~~~------ 225 (257)
T cd05116 158 GKWPVKWYAPECMN-YYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG-----NEVTQMIESGERMECPQRCPP------ 225 (257)
T ss_pred CCCCccccCHhHhc-cCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHHCCCCCCCCCCCCH------
Confidence 12346899999854 4578899999999999999998 9999975321 1222222211 1122233333
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhh
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 581 (584)
++.+++.+||+.||++||++.+|.++|++.
T Consensus 226 -------~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 226 -------EMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred -------HHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 344577789999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-26 Score=228.95 Aligned_cols=215 Identities=19% Similarity=0.241 Sum_probs=150.2
Q ss_pred eceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeeccc
Q 007935 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIR 428 (584)
Q Consensus 349 ~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~ 428 (584)
.||+|+||.||++....+.. ...+++|.++........+.|.+|+.+++.++|||||+++++|.+....++||||++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~---~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTG---VARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCE 78 (268)
T ss_pred cCCCCcCceEEEEEEEcCCC---cceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCC
Confidence 58999999999998655421 145778877765444445789999999999999999999999999999999999999
Q ss_pred CCcHHHHHhc-----------------------------c--cccccCCCCccccccCeEEecCCCccc-----------
Q 007935 429 NGSLYAALHG-----------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI----------- 466 (584)
Q Consensus 429 ~GsL~~~L~~-----------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~----------- 466 (584)
+|+|.++++. . -|+++.+.|+.+..+..++..++|...
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 158 (268)
T cd05086 79 LGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETE 158 (268)
T ss_pred CCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchhhhcc
Confidence 9999877753 1 246667777767666667777766321
Q ss_pred --ccCCCcccCcccccc------CCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccC
Q 007935 467 --SAISNVYLAPEARIY------GSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVID 537 (584)
Q Consensus 467 --~~gt~~y~aPE~~~~------~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d 537 (584)
..++..|+|||++.. ...++.++|||||||++|||++ |..||.... ..+.......... ....+
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~-----~~~~~~~~~~~~~--~~~~~ 231 (268)
T cd05086 159 DDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLS-----DREVLNHVIKDQQ--VKLFK 231 (268)
T ss_pred cCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHhhcc--cccCC
Confidence 246778999998532 1245789999999999999997 566775321 1222222222211 11222
Q ss_pred hhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHH
Q 007935 538 PALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579 (584)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~ 579 (584)
+.+..... ..+.+++..|| .+|++||+++||++.|.
T Consensus 232 ~~~~~~~~-----~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 232 PQLELPYS-----ERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CccCCCCc-----HHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 22211111 13445677799 57999999999998874
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-27 Score=241.84 Aligned_cols=204 Identities=21% Similarity=0.244 Sum_probs=152.0
Q ss_pred eceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHH-HHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVE-AIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 349 ~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~-~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
+||+|+||.||+|+...++ +.||+|++.... .....+.+.+|.. +++.++||||+++++++..++..++|||
T Consensus 2 ~lG~G~~g~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e 76 (325)
T cd05604 2 VIGKGSFGKVLLAKRKLDG-----KCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLD 76 (325)
T ss_pred ceeeCCCeEEEEEEECCCC-----CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEc
Confidence 6999999999999987765 899999997541 2223356667765 4677899999999999999999999999
Q ss_pred cccCCcHHHHH-------------------------hccc--ccccCCCCccccccCeEEecCCCcc-----------cc
Q 007935 426 FIRNGSLYAAL-------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSR-----------IS 467 (584)
Q Consensus 426 y~~~GsL~~~L-------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~ 467 (584)
|+++|+|..++ |+.| |+++++.|+.+..++.++..++|.. ..
T Consensus 77 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~ 156 (325)
T cd05604 77 FVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTF 156 (325)
T ss_pred CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcccc
Confidence 99999996554 4333 6778888888877777777777632 13
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHH
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAK 547 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 547 (584)
.||..|||||++.. ..++.++|||||||++|||++|+.||... ...............+....+.
T Consensus 157 ~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~G~~pf~~~-----~~~~~~~~~~~~~~~~~~~~~~--------- 221 (325)
T cd05604 157 CGTPEYLAPEVIRK-QPYDNTVDWWCLGAVLYEMLYGLPPFYCR-----DVAEMYDNILHKPLVLRPGASL--------- 221 (325)
T ss_pred cCChhhCCHHHHcC-CCCCCcCccccccceehhhhcCCCCCCCC-----CHHHHHHHHHcCCccCCCCCCH---------
Confidence 58899999999554 67899999999999999999999999742 2233333333332222222222
Q ss_pred HHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 548 RQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 548 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+|++.+|.+||++++.++
T Consensus 222 ----~~~~ll~~ll~~~p~~R~~~~~~~~ 246 (325)
T cd05604 222 ----TAWSILEELLEKDRQRRLGAKEDFL 246 (325)
T ss_pred ----HHHHHHHHHhccCHHhcCCCCCCHH
Confidence 3345777799999999999874443
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-26 Score=228.32 Aligned_cols=214 Identities=21% Similarity=0.365 Sum_probs=156.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCc------
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDE------ 419 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~------ 419 (584)
.+.||+|+||.||+|.....+. ....||||+++... .....+.|.+|++.+++++||||+++++++.+.+.
T Consensus 4 ~~~lg~G~~g~v~~~~~~~~~~--~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 81 (273)
T cd05035 4 GKILGEGEFGSVMEGQLSQDDG--SQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPK 81 (273)
T ss_pred ccccCcCCCceEEEEEEecCCC--CcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcc
Confidence 4579999999999999865321 12689999997642 23334689999999999999999999999877554
Q ss_pred eeEeeecccCCcHHHHHh-------------------------------ccc--ccccCCCCccccccCeEEecCCCccc
Q 007935 420 KLLISDFIRNGSLYAALH-------------------------------GFG--LNRLLPGTSKVTKNETIVTSGTGSRI 466 (584)
Q Consensus 420 ~~lV~Ey~~~GsL~~~L~-------------------------------~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~ 466 (584)
.++||||+++|+|..+++ +.+ |+++.+.|+.+..+..++..++|...
T Consensus 82 ~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~ 161 (273)
T cd05035 82 PMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLSK 161 (273)
T ss_pred cEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCcccee
Confidence 799999999999976652 222 46677777777666677777766432
Q ss_pred -------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC-CC
Q 007935 467 -------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER-RP 531 (584)
Q Consensus 467 -------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~-~~ 531 (584)
..++..|+|||++. +..++.++|||||||++|||++ |..||.+... .++........ ..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~pe~~~-~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~-----~~~~~~~~~~~~~~ 235 (273)
T cd05035 162 KIYSGDYYRQGRIAKMPVKWIAIESLA-DRVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN-----HEIYDYLRHGNRLK 235 (273)
T ss_pred eccccccccccccccCCccccCHhhcc-cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHHcCCCCC
Confidence 12356799999854 4678999999999999999999 8888865322 12222222111 11
Q ss_pred CccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhh
Q 007935 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581 (584)
Q Consensus 532 ~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 581 (584)
.+..+ ..++.+++.+||+.||++|||+.|+++.|+++
T Consensus 236 ~~~~~-------------~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 236 QPEDC-------------LDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CCcCC-------------CHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11111 22456788889999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.9e-27 Score=237.67 Aligned_cols=201 Identities=18% Similarity=0.267 Sum_probs=153.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLI 423 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV 423 (584)
.+.||+|+||.||+|+...++ +.||||.++... .....+.+..|..++..+ +|++|+++++++.+.+..++|
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv 79 (323)
T cd05616 5 LMVLGKGSFGKVMLAERKGTD-----ELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFV 79 (323)
T ss_pred EEEEeeCCCeEEEEEEECCCC-----CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEE
Confidence 467999999999999987765 799999997642 222335678888888887 689999999999999999999
Q ss_pred eecccCCcHHHHH-------------------------hccc--ccccCCCCccccccCeEEecCCCccc----------
Q 007935 424 SDFIRNGSLYAAL-------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 424 ~Ey~~~GsL~~~L-------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
|||+++|+|.+++ |+.| |+++++.|+.+..++.++..++|...
T Consensus 80 ~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~~ 159 (323)
T cd05616 80 MEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTK 159 (323)
T ss_pred EcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCCCccc
Confidence 9999999996555 3333 57778888888777778887776432
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIH 545 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~ 545 (584)
..||+.|+|||++.. ..++.++|||||||++|||+||+.||.... ..............++..+++
T Consensus 160 ~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltg~~Pf~~~~-----~~~~~~~i~~~~~~~p~~~s~------- 226 (323)
T cd05616 160 TFCGTPDYIAPEIIAY-QPYGKSVDWWAFGVLLYEMLAGQAPFEGED-----EDELFQSIMEHNVAYPKSMSK------- 226 (323)
T ss_pred cCCCChhhcCHHHhcC-CCCCCccchhchhHHHHHHHhCCCCCCCCC-----HHHHHHHHHhCCCCCCCcCCH-------
Confidence 358999999999554 689999999999999999999999997532 223333333333333333333
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCCh
Q 007935 546 AKRQVLATFHIALNCTELDPEFRPRM 571 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RPt~ 571 (584)
++.+++.+|++.||++|++.
T Consensus 227 ------~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 227 ------EAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred ------HHHHHHHHHcccCHHhcCCC
Confidence 33457778999999999985
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.4e-27 Score=240.15 Aligned_cols=204 Identities=22% Similarity=0.260 Sum_probs=151.8
Q ss_pred eceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHH-HHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVE-AIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 349 ~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~-~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.||+|+||.||+|+...++ +.||+|++.... .....+.+.+|.. +++.++||||+++++++.+.+..++|||
T Consensus 2 ~lg~G~fg~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e 76 (325)
T cd05602 2 VIGKGSFGKVLLARHKAEE-----KFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLD 76 (325)
T ss_pred eeeeCCCeEEEEEEECCCC-----CEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEe
Confidence 6999999999999987765 789999997542 1122244555554 5678899999999999999999999999
Q ss_pred cccCCcHHHHH-------------------------hccc--ccccCCCCccccccCeEEecCCCcc-----------cc
Q 007935 426 FIRNGSLYAAL-------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSR-----------IS 467 (584)
Q Consensus 426 y~~~GsL~~~L-------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~ 467 (584)
|+++|+|.+++ |+.| |+++++.|+.+..++.++..++|.. ..
T Consensus 77 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~ 156 (325)
T cd05602 77 YINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTF 156 (325)
T ss_pred CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcccc
Confidence 99999996555 3333 6778888888877777777777632 23
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHH
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAK 547 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 547 (584)
.||+.|||||++. +..++.++|||||||++|||++|+.||.... ..................+++.+
T Consensus 157 ~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~el~~g~~pf~~~~-----~~~~~~~i~~~~~~~~~~~~~~~------- 223 (325)
T cd05602 157 CGTPEYLAPEVLH-KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN-----TAEMYDNILNKPLQLKPNITNSA------- 223 (325)
T ss_pred cCCccccCHHHHc-CCCCCCccccccccHHHHHHhcCCCCCCCCC-----HHHHHHHHHhCCcCCCCCCCHHH-------
Confidence 5899999999854 4689999999999999999999999997422 23333333333222233333333
Q ss_pred HHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 548 RQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 548 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+++.+|++.||.+||++.+.+.
T Consensus 224 ------~~li~~~l~~~p~~R~~~~~~~~ 246 (325)
T cd05602 224 ------RHLLEGLLQKDRTKRLGAKDDFM 246 (325)
T ss_pred ------HHHHHHHcccCHHHCCCCCCCHH
Confidence 34666799999999999875443
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-26 Score=231.92 Aligned_cols=223 Identities=26% Similarity=0.340 Sum_probs=158.4
Q ss_pred ceeceeecCceEEEEEecCCCCC-----------CCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEE
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGM-----------GAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYY 415 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~-----------~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~ 415 (584)
.+.||+|+||.||+|.....+.. .....||+|.+.........+.|.+|++++++++||||+++++++.
T Consensus 10 ~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~ 89 (296)
T cd05051 10 VEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLLGVCT 89 (296)
T ss_pred cccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEEEEEEe
Confidence 35799999999999988664321 2336799999987654455678999999999999999999999999
Q ss_pred eCCceeEeeecccCCcHHHHHhc------------------------------------c--cccccCCCCccccccCeE
Q 007935 416 ANDEKLLISDFIRNGSLYAALHG------------------------------------F--GLNRLLPGTSKVTKNETI 457 (584)
Q Consensus 416 ~~~~~~lV~Ey~~~GsL~~~L~~------------------------------------~--g~~~~~~~~~~i~~~~~~ 457 (584)
.++..++||||+++++|.++++. . -|+++.+.|+.+..+..+
T Consensus 90 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~~~~~~ 169 (296)
T cd05051 90 VDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVGKNYTI 169 (296)
T ss_pred cCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceeecCCCce
Confidence 99999999999999999777642 2 256677777777666666
Q ss_pred EecCCCccc-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh--CCCCCCCCCCCCCcHHHHH
Q 007935 458 VTSGTGSRI-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT--GRLPDAGPENDGKGLESLV 522 (584)
Q Consensus 458 ~~~~~~~~~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt--G~~p~~~~~~~~~~l~~~~ 522 (584)
...++|... ..++..|||||++.. ..++.++|||||||++|||++ |..||..... .......
T Consensus 170 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~--~~~~~~~ 246 (296)
T cd05051 170 KIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLL-GKFTTKSDVWAFGVTLWEILTLCREQPYEHLTD--QQVIENA 246 (296)
T ss_pred EEccccceeecccCcceeecCcCCCCceecCHHHhhc-CCCCccchhhhhHHHHHHHHhcCCCCCCCCcCh--HHHHHHH
Confidence 666665322 134567999998554 578999999999999999998 6777764221 1111111
Q ss_pred HHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHh
Q 007935 523 RKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580 (584)
Q Consensus 523 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 580 (584)
...............+ .....++.+++.+||+.||++|||+.||++.|++
T Consensus 247 ~~~~~~~~~~~~~~~~--------~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 247 GHFFRDDGRQIYLPRP--------PNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred HhccccccccccCCCc--------cCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 1111110000000000 0111356779999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-26 Score=229.64 Aligned_cols=214 Identities=23% Similarity=0.365 Sum_probs=155.4
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
...||+|+||.||++.............||+|.+.... ....+.|.+|++++++++|+||+++++++.+.+..++||||
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 88 (280)
T cd05092 10 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS-ESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMVFEY 88 (280)
T ss_pred ccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC-HHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEEEEec
Confidence 45799999999999976432222223789999987643 33447899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc----------------------------------------cc--ccccCCCCccccccCeEEecCCCc
Q 007935 427 IRNGSLYAALHG----------------------------------------FG--LNRLLPGTSKVTKNETIVTSGTGS 464 (584)
Q Consensus 427 ~~~GsL~~~L~~----------------------------------------~g--~~~~~~~~~~i~~~~~~~~~~~~~ 464 (584)
+++|+|.++++. .| |+++.+.|+.+..+..++..+++.
T Consensus 89 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~kL~dfg~ 168 (280)
T cd05092 89 MRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKIGDFGM 168 (280)
T ss_pred CCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCCEEECCCCc
Confidence 999998776642 22 456666776666666666666653
Q ss_pred cc-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC-
Q 007935 465 RI-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER- 529 (584)
Q Consensus 465 ~~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~- 529 (584)
.. ..++..|+|||++.. ..++.++|||||||++|||++ |+.||..... .+.........
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-----~~~~~~~~~~~~ 242 (280)
T cd05092 169 SRDIYSTDYYRVGGRTMLPIRWMPPESILY-RKFTTESDIWSFGVVLWEIFTYGKQPWYQLSN-----TEAIECITQGRE 242 (280)
T ss_pred eeEcCCCceeecCCCccccccccCHHHhcc-CCcCchhhHHHHHHHHHHHHcCCCCCCccCCH-----HHHHHHHHcCcc
Confidence 31 123567999998544 678999999999999999999 8999864221 11222222111
Q ss_pred CCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHh
Q 007935 530 RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580 (584)
Q Consensus 530 ~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 580 (584)
...+..+++ .+.+++.+||+.||++||++.||.+.|++
T Consensus 243 ~~~~~~~~~-------------~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 243 LERPRTCPP-------------EVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred CCCCCCCCH-------------HHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 111122222 34567888999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-27 Score=250.01 Aligned_cols=219 Identities=16% Similarity=0.179 Sum_probs=169.6
Q ss_pred hhhHhhhcceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcC-CCceeeeeEE-EEe
Q 007935 339 LEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-HPNIVRLKAF-YYA 416 (584)
Q Consensus 339 ~~~l~~~~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~-HpnIV~l~g~-~~~ 416 (584)
+......-.++|.+|||+.||.|....++ ..+|+|++-.. +....+...+||++|++|+ |||||.+++. ...
T Consensus 34 Vg~~~v~V~~vLAEGGFa~VYla~~~~~~-----~~~AlKrm~~~-de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~ 107 (738)
T KOG1989|consen 34 VGSHRVTVEKVLAEGGFAQVYLAQDVKGG-----KKYALKRMYVN-DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAIN 107 (738)
T ss_pred ECCEEEEEEEEEccCCcEEEEEEEecCCC-----ceeeeeeeecC-CHHHHHHHHHHHHHHHHhcCCCceeeEecccccc
Confidence 33333334678999999999999998876 79999999875 5555688999999999996 9999999993 322
Q ss_pred ---C---CceeEeeecccCCcHHHHHhc-------------------------------ccccccCCCCccccccCeEEe
Q 007935 417 ---N---DEKLLISDFIRNGSLYAALHG-------------------------------FGLNRLLPGTSKVTKNETIVT 459 (584)
Q Consensus 417 ---~---~~~~lV~Ey~~~GsL~~~L~~-------------------------------~g~~~~~~~~~~i~~~~~~~~ 459 (584)
+ -+++|.||||++|.|.+++.. ..|+|++.+|.++..++.++.
T Consensus 108 ~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KL 187 (738)
T KOG1989|consen 108 RSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKL 187 (738)
T ss_pred ccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEe
Confidence 1 358899999999999888753 158999999999999999999
Q ss_pred cCCCcccc--------------------cCCCcccCcccc--ccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCc
Q 007935 460 SGTGSRIS--------------------AISNVYLAPEAR--IYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKG 517 (584)
Q Consensus 460 ~~~~~~~~--------------------~gt~~y~aPE~~--~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~ 517 (584)
+|||+... .-|+.|.|||++ ..|..+++|+||||+||+||-|+....||+....-
T Consensus 188 CDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l--- 264 (738)
T KOG1989|consen 188 CDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL--- 264 (738)
T ss_pred CcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce---
Confidence 99986431 347889999975 35577899999999999999999999999853111
Q ss_pred HHHHHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 518 LESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 518 l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
. ++.....++.. | .+...+.+|+..||+.||++||++.||+..+.+|..
T Consensus 265 --a----Ilng~Y~~P~~--p---------~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~ 313 (738)
T KOG1989|consen 265 --A----ILNGNYSFPPF--P---------NYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELAN 313 (738)
T ss_pred --e----EEeccccCCCC--c---------cHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhc
Confidence 1 11222222221 1 122355667778999999999999999999888753
|
|
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-26 Score=228.98 Aligned_cols=215 Identities=21% Similarity=0.304 Sum_probs=159.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|.............||+|.+...........|.+|+.++++++||||+++++++...+..++||||
T Consensus 11 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 90 (277)
T cd05032 11 IRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTLVVMEL 90 (277)
T ss_pred EeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcEEEEec
Confidence 46799999999999998765433334789999987654444456799999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc-----------------------------------c--cccccCCCCccccccCeEEecCCCcc----
Q 007935 427 IRNGSLYAALHG-----------------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSR---- 465 (584)
Q Consensus 427 ~~~GsL~~~L~~-----------------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~---- 465 (584)
+++|+|.++++. . -|+++.+.|+.+..+..++..+++..
T Consensus 91 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~dfg~~~~~~ 170 (277)
T cd05032 91 MAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIY 170 (277)
T ss_pred CCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEECCcccchhhc
Confidence 999999877642 1 24566667766666666666666532
Q ss_pred ---------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC-CCCcc
Q 007935 466 ---------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER-RPLSE 534 (584)
Q Consensus 466 ---------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~ 534 (584)
...++..|+|||.+.. ..++.++|||||||++||++| |+.||.... ............ ...+.
T Consensus 171 ~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~ 244 (277)
T cd05032 171 ETDYYRKGGKGLLPVRWMAPESLKD-GVFTTKSDVWSFGVVLWEMATLAEQPYQGLS-----NEEVLKFVIDGGHLDLPE 244 (277)
T ss_pred cCcccccCCCCCccccccCHHHHhc-CCCCcccchHHHHHHHHHhhccCCCCCccCC-----HHHHHHHHhcCCCCCCCC
Confidence 1235678999998554 578999999999999999998 999986422 222222222111 11122
Q ss_pred ccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHh
Q 007935 535 VIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580 (584)
Q Consensus 535 ~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 580 (584)
..+ ..+.+++.+||+.+|++|||+.|+++.|++
T Consensus 245 ~~~-------------~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 245 NCP-------------DKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred CCC-------------HHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 222 245668888999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-26 Score=228.76 Aligned_cols=217 Identities=18% Similarity=0.332 Sum_probs=156.1
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||+||+|.+...+.. ....|++|.+.........+++..|+.++++++|||||++++++. ....++|+||
T Consensus 12 ~~~lg~G~~~~vy~~~~~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~i~e~ 89 (279)
T cd05111 12 LKLLGSGVFGTVHKGIWIPEGDS-IKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQLVTQL 89 (279)
T ss_pred ccccCccCCcceEEEEEcCCCCc-eeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEEEEEe
Confidence 35799999999999998654321 113688898865433334467888999999999999999999875 4567899999
Q ss_pred ccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc------------
Q 007935 427 IRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI------------ 466 (584)
Q Consensus 427 ~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~------------ 466 (584)
+++|+|.++++. . -|+++.+.|+.+..+..++..++|...
T Consensus 90 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 169 (279)
T cd05111 90 SPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYS 169 (279)
T ss_pred CCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceeccCCCcccccC
Confidence 999999877743 2 356777788777666666666665331
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEI 544 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~ 544 (584)
..++..|+|||++.. ..++.++|||||||++||++| |+.||.+... ..+.+++ ....... .+..
T Consensus 170 ~~~~~~~y~~pE~~~~-~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~--~~~~~~~----~~~~~~~---~~~~---- 235 (279)
T cd05111 170 EHKTPIKWMALESILF-GRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRP--HEVPDLL----EKGERLA---QPQI---- 235 (279)
T ss_pred CCCCcccccCHHHhcc-CCcCchhhHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHH----HCCCcCC---CCCC----
Confidence 235668999998654 578999999999999999998 9999875321 1122222 1111111 1111
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
+...+.+++.+||..||++|||+.|+++.|..+..
T Consensus 236 ----~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 236 ----CTIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR 270 (279)
T ss_pred ----CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence 11234567888999999999999999999988753
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=99.95 E-value=9e-27 Score=228.37 Aligned_cols=209 Identities=26% Similarity=0.415 Sum_probs=158.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|....+ ..||+|.+..... ...+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 11 ~~~ig~g~~~~vy~~~~~~~------~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 83 (261)
T cd05148 11 ERKLGSGYFGEVWEGLWKNR------VRVAIKILKSDDL-LKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL 83 (261)
T ss_pred hhhhccCCCccEEEeEecCC------CcEEEEeccccch-hhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence 45799999999999999885 7999999976533 2346799999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc---------------------------cc--ccccCCCCccccccCeEEecCCCccc-----------
Q 007935 427 IRNGSLYAALHG---------------------------FG--LNRLLPGTSKVTKNETIVTSGTGSRI----------- 466 (584)
Q Consensus 427 ~~~GsL~~~L~~---------------------------~g--~~~~~~~~~~i~~~~~~~~~~~~~~~----------- 466 (584)
+++|+|.++++. .| |.++.+.|+.+..+...+..+++...
T Consensus 84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~~ 163 (261)
T cd05148 84 MEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSD 163 (261)
T ss_pred cccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCccccccC
Confidence 999999877653 22 45666677777666666666665322
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhc-CCCCccccChhhhhhh
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRE-RRPLSEVIDPALVKEI 544 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~d~~~~~~~ 544 (584)
..++..|+|||+... ..++.++||||||+++|||++ |+.||.... ........... ..+.+...+
T Consensus 164 ~~~~~~~~~PE~~~~-~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~------- 230 (261)
T cd05148 164 KKIPYKWTAPEAASH-GTFSTKSDVWSFGILLYEMFTYGQVPYPGMN-----NHEVYDQITAGYRMPCPAKCP------- 230 (261)
T ss_pred CCCceEecCHHHHcc-CCCCchhhHHHHHHHHHHHHcCCCCCCCcCC-----HHHHHHHHHhCCcCCCCCCCC-------
Confidence 134567999998554 678999999999999999998 899996532 12222222221 111122222
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhh
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 581 (584)
..+.+++.+||+.||++|||++++++.|+.+
T Consensus 231 ------~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 231 ------QEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred ------HHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 2345688889999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-26 Score=228.65 Aligned_cols=215 Identities=23% Similarity=0.331 Sum_probs=154.1
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|++|.||+|......+......||+|.+...........|.+|+.++++++|+||+++++++.+.+..++||||
T Consensus 11 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 90 (277)
T cd05036 11 LRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFILLEL 90 (277)
T ss_pred eeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcEEEEec
Confidence 45799999999999998763222223789999987654444446799999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcc----------------------------------cccccCCCCccccccC---eEEecCCCcccc--
Q 007935 427 IRNGSLYAALHGF----------------------------------GLNRLLPGTSKVTKNE---TIVTSGTGSRIS-- 467 (584)
Q Consensus 427 ~~~GsL~~~L~~~----------------------------------g~~~~~~~~~~i~~~~---~~~~~~~~~~~~-- 467 (584)
+++|+|.++++.. -|+++.++|+.+..++ ..+..+++....
T Consensus 91 ~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~ 170 (277)
T cd05036 91 MAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIY 170 (277)
T ss_pred CCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccCccccccC
Confidence 9999998877532 2455555665554332 244555543221
Q ss_pred -----------cCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCC-CCcc
Q 007935 468 -----------AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERR-PLSE 534 (584)
Q Consensus 468 -----------~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~~ 534 (584)
..+..|+|||++.. ..++.++|||||||++|||++ |+.||..... ............ ..+.
T Consensus 171 ~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~~g~~pf~~~~~-----~~~~~~~~~~~~~~~~~ 244 (277)
T cd05036 171 RASYYRKGGRAMLPIKWMPPEAFLD-GIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTN-----QEVMEFVTGGGRLDPPK 244 (277)
T ss_pred CccceecCCCCCccHhhCCHHHHhc-CCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHHHHcCCcCCCCC
Confidence 12346999999654 679999999999999999997 9999975322 222222221111 1111
Q ss_pred ccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHh
Q 007935 535 VIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580 (584)
Q Consensus 535 ~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 580 (584)
.++ ..+.+++.+||+.+|++|||+.+|++.|++
T Consensus 245 ~~~-------------~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~ 277 (277)
T cd05036 245 GCP-------------GPVYRIMTDCWQHTPEDRPNFATILERIQY 277 (277)
T ss_pred CCC-------------HHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence 111 245668888999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.8e-27 Score=255.40 Aligned_cols=214 Identities=21% Similarity=0.261 Sum_probs=157.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|+...++ +.||||+++... .....++|.+|++++++++|||||++++++.+++..++||
T Consensus 7 i~~LGkGgfG~VYlA~d~~tg-----~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 7 IRLIGKGGMGEVYLAYDPVCS-----RRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred EEEEecCCCEEEEEEEECCCC-----cEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 367999999999999987765 899999997642 2223467999999999999999999999999999999999
Q ss_pred ecccCCcHHHHHh------------------------------------cc--cccccCCCCccccccCeEEecCCCccc
Q 007935 425 DFIRNGSLYAALH------------------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI 466 (584)
Q Consensus 425 Ey~~~GsL~~~L~------------------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~ 466 (584)
||+++|+|.++++ +. -|++++++|+.+..++.++..|+|...
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk 161 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAI 161 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcce
Confidence 9999999976553 22 367788888877766666666655321
Q ss_pred -----------------------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCc
Q 007935 467 -----------------------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKG 517 (584)
Q Consensus 467 -----------------------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~ 517 (584)
..||+.|||||++. +..++.++|||||||++|||+||+.||.......
T Consensus 162 ~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~-g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k-- 238 (932)
T PRK13184 162 FKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLL-GVPASESTDIYALGVILYQMLTLSFPYRRKKGRK-- 238 (932)
T ss_pred ecccccccccccccccccccccccccCCCCCCCCCCCCHHHhc-CCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh--
Confidence 25899999999854 4688999999999999999999999997522211
Q ss_pred HHHHHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCC-ChHHHHHHHHhh
Q 007935 518 LESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRP-RMRTVSESLDRV 581 (584)
Q Consensus 518 l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RP-t~~ev~~~L~~i 581 (584)
. ......... ....+. ......+.+++.+|++.||++|| +++++.+.|++.
T Consensus 239 i--~~~~~i~~P----~~~~p~-------~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~ 290 (932)
T PRK13184 239 I--SYRDVILSP----IEVAPY-------REIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPH 290 (932)
T ss_pred h--hhhhhccCh----hhcccc-------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 0 011111000 000000 01112345688889999999995 677777777764
|
|
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.8e-27 Score=231.57 Aligned_cols=211 Identities=19% Similarity=0.311 Sum_probs=150.3
Q ss_pred eceeecCceEEEEEecCCCC--CCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 349 VVGKSKNGIMYKVVVGRGSG--MGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 349 ~iG~G~~g~Vy~~~~~~~~~--~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.||+|+||.||+|.....+. ......||+|.+.... ....+.|.+|+.+++.++|||||++++++..++..++||||
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH-RNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcchh-HHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 58999999999998765431 1223568999886542 23346789999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc--------------------------cc--ccccCCCCccccccCe--------EEecCCCcc-----
Q 007935 427 IRNGSLYAALHG--------------------------FG--LNRLLPGTSKVTKNET--------IVTSGTGSR----- 465 (584)
Q Consensus 427 ~~~GsL~~~L~~--------------------------~g--~~~~~~~~~~i~~~~~--------~~~~~~~~~----- 465 (584)
+++|+|.++++. .| |+++.+.|+.+..++. +...+++..
T Consensus 81 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~ 160 (258)
T cd05078 81 VKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLP 160 (258)
T ss_pred CCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccccCC
Confidence 999999877753 22 4666666666654432 234444432
Q ss_pred --cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCC-CCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhh
Q 007935 466 --ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR-LPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVK 542 (584)
Q Consensus 466 --~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~-~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~ 542 (584)
...++..|+|||++..+..++.++|||||||++|||++|. .||..... .... ........++....+
T Consensus 161 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~-----~~~~-~~~~~~~~~~~~~~~---- 230 (258)
T cd05078 161 KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDS-----QKKL-QFYEDRHQLPAPKWT---- 230 (258)
T ss_pred chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccH-----HHHH-HHHHccccCCCCCcH----
Confidence 2357788999999765456899999999999999999985 55543211 1111 111222222222222
Q ss_pred hhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHH
Q 007935 543 EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579 (584)
Q Consensus 543 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~ 579 (584)
++.+++.+||+.||++|||++++++.|+
T Consensus 231 ---------~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 231 ---------ELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred ---------HHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 3456888899999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-26 Score=227.82 Aligned_cols=213 Identities=22% Similarity=0.335 Sum_probs=154.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC-CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC------Cc
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN------DE 419 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~------~~ 419 (584)
.+.||+|+||.||+|.....+. ...||+|.++.. ......+.|.+|++++++++||||++++++|... ..
T Consensus 4 ~~~ig~G~~g~V~~~~~~~~~~---~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 4 GKTLGEGEFGSVMEGQLNQDDS---ILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred ccccCcccCceEEEeEEccCCC---eeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 4679999999999999866531 146999998765 2333457899999999999999999999988542 24
Q ss_pred eeEeeecccCCcHHHHH-------------------------------hcc--cccccCCCCccccccCeEEecCCCccc
Q 007935 420 KLLISDFIRNGSLYAAL-------------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSRI 466 (584)
Q Consensus 420 ~~lV~Ey~~~GsL~~~L-------------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~ 466 (584)
.++||||+++|+|.+++ |+. -|+++.++|+.+..+...+..++|...
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 160 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSK 160 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCccc
Confidence 68999999999986554 322 356777788777666767777776432
Q ss_pred -------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCC-C
Q 007935 467 -------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERR-P 531 (584)
Q Consensus 467 -------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~-~ 531 (584)
..++..|+|||+... ..++.++|||||||++|||++ |+.||..... ............ +
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-----~~~~~~~~~~~~~~ 234 (272)
T cd05075 161 KIYNGDYYRQGRIAKMPVKWIAIESLAD-RVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN-----SEIYDYLRQGNRLK 234 (272)
T ss_pred ccCcccceecCCcccCCcccCCHHHccC-CCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHHHHcCCCCC
Confidence 134567999998544 678999999999999999999 8889864221 222222221111 1
Q ss_pred CccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhh
Q 007935 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581 (584)
Q Consensus 532 ~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 581 (584)
....+ ...+.+++.+||+.||++|||+.++++.|+++
T Consensus 235 ~~~~~-------------~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 235 QPPDC-------------LDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CCCCC-------------CHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 11111 12356788889999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.6e-27 Score=236.40 Aligned_cols=201 Identities=17% Similarity=0.243 Sum_probs=153.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCC-CceeeeeEEEEeCCceeEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQH-PNIVRLKAFYYANDEKLLI 423 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~H-pnIV~l~g~~~~~~~~~lV 423 (584)
.+.||+|+||.||+|+...++ +.||||+++... .....+.+..|++++..++| ++|+++++++.+.+..|+|
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~-----~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv 79 (324)
T cd05587 5 LMVLGKGSFGKVMLAERKGTD-----ELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV 79 (324)
T ss_pred EEEEeeccCeEEEEEEECCCC-----CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEE
Confidence 467999999999999987765 789999997641 22334678899999999966 5688999999999999999
Q ss_pred eecccCCcHHHHH-------------------------hccc--ccccCCCCccccccCeEEecCCCccc----------
Q 007935 424 SDFIRNGSLYAAL-------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 424 ~Ey~~~GsL~~~L-------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
|||+++|+|.+++ |..| |++++++|+.+..++.++..++|...
T Consensus 80 ~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~ 159 (324)
T cd05587 80 MEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTR 159 (324)
T ss_pred EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCcee
Confidence 9999999996555 3333 57778888877777777777776322
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIH 545 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~ 545 (584)
..||..|+|||++. +..++.++|||||||++|||+||+.||.+.. ..............++..+++.
T Consensus 160 ~~~gt~~y~aPE~~~-~~~~~~~~DiwslGvil~elltG~~pf~~~~-----~~~~~~~i~~~~~~~~~~~~~~------ 227 (324)
T cd05587 160 TFCGTPDYIAPEIIA-YQPYGKSVDWWAFGVLLYEMLAGQPPFDGED-----EDELFQSIMEHNVSYPKSLSKE------ 227 (324)
T ss_pred eecCCccccChhhhc-CCCCCcccchhhhHHHHHHHHhCCCCCCCCC-----HHHHHHHHHcCCCCCCCCCCHH------
Confidence 35899999999955 4678999999999999999999999997432 2333333333333333434433
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCCh
Q 007935 546 AKRQVLATFHIALNCTELDPEFRPRM 571 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RPt~ 571 (584)
+.+++.+||+.||.+|++.
T Consensus 228 -------~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 228 -------AVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred -------HHHHHHHHhhcCHHHcCCC
Confidence 3457777999999999986
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-26 Score=227.56 Aligned_cols=215 Identities=25% Similarity=0.371 Sum_probs=157.1
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
..+.||+|+||.||+|.....+.. ...||||.++........++|.+|+.++++++||||+++++++.+++..++|||
T Consensus 8 ~~~~lg~g~~g~vy~~~~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 85 (269)
T cd05065 8 IEEVIGAGEFGEVCRGRLKLPGKR--EIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITE 85 (269)
T ss_pred EEeEecCCCCCeEEEEEEecCCCC--ceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEEe
Confidence 356899999999999998765321 157999999865444455789999999999999999999999999999999999
Q ss_pred cccCCcHHHHHhc--------------------------cc--ccccCCCCccccccCeEEecCCCcccc----------
Q 007935 426 FIRNGSLYAALHG--------------------------FG--LNRLLPGTSKVTKNETIVTSGTGSRIS---------- 467 (584)
Q Consensus 426 y~~~GsL~~~L~~--------------------------~g--~~~~~~~~~~i~~~~~~~~~~~~~~~~---------- 467 (584)
|+++|+|.++++. .| |+++.+.|..+..+...+..+++....
T Consensus 86 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 165 (269)
T cd05065 86 FMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTY 165 (269)
T ss_pred cCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccCcccccc
Confidence 9999999777642 22 456666666665555555556543211
Q ss_pred ---c---CCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC-CCCccccChh
Q 007935 468 ---A---ISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER-RPLSEVIDPA 539 (584)
Q Consensus 468 ---~---gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~d~~ 539 (584)
. .+..|+|||++.. ..++.++|||||||++||+++ |..||.... ............ .+.....
T Consensus 166 ~~~~~~~~~~~y~~PE~~~~-~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~-----~~~~~~~i~~~~~~~~~~~~--- 236 (269)
T cd05065 166 TSSLGGKIPIRWTAPEAIAY-RKFTSASDVWSYGIVMWEVMSYGERPYWDMS-----NQDVINAIEQDYRLPPPMDC--- 236 (269)
T ss_pred ccccCCCcceeecCHhHhcc-CcccchhhhhhhHHHHHHHhcCCCCCCCCCC-----HHHHHHHHHcCCcCCCcccC---
Confidence 1 1346999999554 678999999999999999987 999987422 122222221111 1111111
Q ss_pred hhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhh
Q 007935 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581 (584)
Q Consensus 540 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 581 (584)
...+.+++.+||+.+|++||++.+|+++|+++
T Consensus 237 ----------~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 237 ----------PTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred ----------CHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 12345688889999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.2e-27 Score=237.97 Aligned_cols=214 Identities=19% Similarity=0.268 Sum_probs=157.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC---cchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeE
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD---ATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLL 422 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~---~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~l 422 (584)
.+.||+|+||.||+++...+. ...+.||+|.+.... .....+.+.+|+.++.++ +||||+++++++.+++..++
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l 82 (332)
T cd05614 5 LKVLGTGAYGKVFLVRKVTGH--DTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHL 82 (332)
T ss_pred EEEEeecCCEEEEEEEEcccC--CCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEEE
Confidence 467999999999999875321 112789999997531 222346788999999999 59999999999999999999
Q ss_pred eeecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCccc---------
Q 007935 423 ISDFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI--------- 466 (584)
Q Consensus 423 V~Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~--------- 466 (584)
||||+++|+|.+++. +. -|+++++.|+.+..++.++..|+|...
T Consensus 83 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~~~ 162 (332)
T cd05614 83 ILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKER 162 (332)
T ss_pred EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccCCCc
Confidence 999999999976653 32 367788888888777777877776321
Q ss_pred ---ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhh
Q 007935 467 ---SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKE 543 (584)
Q Consensus 467 ---~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~ 543 (584)
..||..|||||++.....++.++|||||||++|||+||+.||...... .....+.........+++..+++.+
T Consensus 163 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--- 238 (332)
T cd05614 163 TYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGER-NTQSEVSRRILKCDPPFPSFIGPEA--- 238 (332)
T ss_pred cccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCC-CCHHHHHHHHhcCCCCCCCCCCHHH---
Confidence 358999999998654345789999999999999999999999743221 1223333333333333444444443
Q ss_pred hhHHHHHHHHHHHHhcccCCCCCCCC-----ChHHHHH
Q 007935 544 IHAKRQVLATFHIALNCTELDPEFRP-----RMRTVSE 576 (584)
Q Consensus 544 ~~~~~~~~~~~~l~~~Cl~~~P~~RP-----t~~ev~~ 576 (584)
.+++.+||+.||++|| ++.++++
T Consensus 239 ----------~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 239 ----------QDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred ----------HHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 3466779999999999 6667654
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-26 Score=226.46 Aligned_cols=205 Identities=22% Similarity=0.366 Sum_probs=152.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||++....+ ..+|+|.+...... .++|.+|++++++++||||+++++++.+.+..++||||
T Consensus 9 ~~~lg~G~~~~v~~~~~~~~------~~~~iK~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd05059 9 LKELGSGQFGVVHLGKWRGK------IDVAIKMIREGAMS--EDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEY 80 (256)
T ss_pred hhhhccCCCceEEEeEecCC------ccEEEEEeccCCCC--HHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEec
Confidence 45799999999999988654 68999998754322 26789999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCcccc-----------
Q 007935 427 IRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRIS----------- 467 (584)
Q Consensus 427 ~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~~----------- 467 (584)
+++++|.++++. . -|+++.+.|+.+..++..+..+++....
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~ 160 (256)
T cd05059 81 MANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQG 160 (256)
T ss_pred CCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecccccccccCC
Confidence 999999887743 1 2456666776666666677777653221
Q ss_pred -cCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhc-CCCCccccChhhhhhh
Q 007935 468 -AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRE-RRPLSEVIDPALVKEI 544 (584)
Q Consensus 468 -~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~d~~~~~~~ 544 (584)
.++..|+|||++.. ..++.++|||||||++|||+| |+.||..... .......... ....+...+
T Consensus 161 ~~~~~~y~~Pe~~~~-~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~------- 227 (256)
T cd05059 161 TKFPVKWAPPEVFDY-SRFSSKSDVWSFGVLMWEVFSEGKMPYERFSN-----SEVVESVSAGYRLYRPKLAP------- 227 (256)
T ss_pred CCCCccccCHHHhcc-CCCCchhhHHHHHHHHHHHhccCCCCCCCCCH-----HHHHHHHHcCCcCCCCCCCC-------
Confidence 12346999998554 678999999999999999999 8999864321 1112221111 111111122
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHH
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 578 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L 578 (584)
..+.+++.+||+.+|++|||+.|+++.|
T Consensus 228 ------~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 228 ------TEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred ------HHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 2456788889999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-26 Score=228.72 Aligned_cols=213 Identities=23% Similarity=0.289 Sum_probs=150.3
Q ss_pred eceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeeccc
Q 007935 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIR 428 (584)
Q Consensus 349 ~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~ 428 (584)
.||+|+||.||+|...++. ....+|+|.+.........+.|.+|+++++.++||||++++++|.+.+..++||||++
T Consensus 2 ~lg~G~fg~v~~~~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGM---SKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCP 78 (269)
T ss_pred cCCccCCceEEEEEEecCC---CCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCC
Confidence 5899999999999765431 2267999988765444444678999999999999999999999999999999999999
Q ss_pred CCcHHHHHhc------------------------------c--cccccCCCCccccccCeEEecCCCccc----------
Q 007935 429 NGSLYAALHG------------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 429 ~GsL~~~L~~------------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
+|+|.+++.. . -|+++++.|+.+..+..++..++|...
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~ 158 (269)
T cd05042 79 LGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYIT 158 (269)
T ss_pred CCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchheec
Confidence 9999877642 1 256677777777777777777766432
Q ss_pred ---ccCCCcccCcccccc------CCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhc-CCCCc-c
Q 007935 467 ---SAISNVYLAPEARIY------GSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRE-RRPLS-E 534 (584)
Q Consensus 467 ---~~gt~~y~aPE~~~~------~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~-~ 534 (584)
..++..|+|||++.. +..++.++|||||||++|||++ |+.||..... . +........ ...++ .
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~----~-~~~~~~~~~~~~~~~~~ 233 (269)
T cd05042 159 KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSD----E-QVLKQVVREQDIKLPKP 233 (269)
T ss_pred cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCH----H-HHHHHHhhccCccCCCC
Confidence 134567999998532 2356889999999999999999 7888864321 1 111221111 11111 1
Q ss_pred ccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHH
Q 007935 535 VIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579 (584)
Q Consensus 535 ~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~ 579 (584)
..+.... ..+.+++..|| .||++|||++||++.|.
T Consensus 234 ~~~~~~~---------~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 234 QLDLKYS---------DRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred cccccCC---------HHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 1111111 13344666788 59999999999999874
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.3e-27 Score=229.35 Aligned_cols=214 Identities=25% Similarity=0.401 Sum_probs=153.3
Q ss_pred eeceeecCceEEEEEecCCCC-CCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 348 YVVGKSKNGIMYKVVVGRGSG-MGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~-~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
+.||+|+||.||+|+..+... ......||||.+..........+|.+|++++++++||||++++++|...+..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 368999999999998865321 1223689999987654334457899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc--------------------------------c--cccccCCCCccccccC-----eEEecCCCccc-
Q 007935 427 IRNGSLYAALHG--------------------------------F--GLNRLLPGTSKVTKNE-----TIVTSGTGSRI- 466 (584)
Q Consensus 427 ~~~GsL~~~L~~--------------------------------~--g~~~~~~~~~~i~~~~-----~~~~~~~~~~~- 466 (584)
+++|+|.+++++ . -|+++.+.|+.+..+. .++..+++...
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~ 160 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARD 160 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccccc
Confidence 999999887753 1 2345555555554443 45555554321
Q ss_pred ------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC-CCC
Q 007935 467 ------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER-RPL 532 (584)
Q Consensus 467 ------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~-~~~ 532 (584)
..++..|+|||++.. ..++.++|||||||++|||+| |+.||..... .+......... ...
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~-----~~~~~~~~~~~~~~~ 234 (269)
T cd05044 161 IYKSDYYRKEGEGLLPVRWMAPESLLD-GKFTTQSDVWSFGVLMWEILTLGQQPYPALNN-----QEVLQHVTAGGRLQK 234 (269)
T ss_pred cccccccccCcccCCCccccCHHHHcc-CCcccchhHHHHHHHHHHHHHcCCCCCcccCH-----HHHHHHHhcCCccCC
Confidence 134567999998654 578999999999999999998 9999864221 12221111111 111
Q ss_pred ccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHh
Q 007935 533 SEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580 (584)
Q Consensus 533 ~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 580 (584)
...+ ...+.+++.+||+.+|++||++.++++.|++
T Consensus 235 ~~~~-------------~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 235 PENC-------------PDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred cccc-------------hHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 1111 1245668888999999999999999999874
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.9e-26 Score=230.11 Aligned_cols=218 Identities=23% Similarity=0.311 Sum_probs=160.3
Q ss_pred cceeceeecCceEEEEEecCC--CCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeE
Q 007935 346 SAYVVGKSKNGIMYKVVVGRG--SGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLL 422 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~--~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~l 422 (584)
..+.||+|+||.||+|+.... ........||+|.++........+++.+|+.+++.+ +||||+++++++...+..++
T Consensus 19 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~l 98 (304)
T cd05101 19 LGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 98 (304)
T ss_pred ecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCCceEE
Confidence 457899999999999986321 111223689999987654444457899999999999 89999999999999999999
Q ss_pred eeecccCCcHHHHHhc-----------------------------------------cc--ccccCCCCccccccCeEEe
Q 007935 423 ISDFIRNGSLYAALHG-----------------------------------------FG--LNRLLPGTSKVTKNETIVT 459 (584)
Q Consensus 423 V~Ey~~~GsL~~~L~~-----------------------------------------~g--~~~~~~~~~~i~~~~~~~~ 459 (584)
||||+++|+|.++++. .| |+++.+.|+.+..+..++.
T Consensus 99 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~~~~~kl 178 (304)
T cd05101 99 IVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTENNVMKI 178 (304)
T ss_pred EEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcCCCcEEE
Confidence 9999999999877642 22 4667777777766666666
Q ss_pred cCCCccc-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHH
Q 007935 460 SGTGSRI-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKA 525 (584)
Q Consensus 460 ~~~~~~~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~ 525 (584)
.+++... ..++..|+|||++.. ..++.++|||||||++|||+| |..||... ....+....
T Consensus 179 ~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~-----~~~~~~~~~ 252 (304)
T cd05101 179 ADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-----PVEELFKLL 252 (304)
T ss_pred CCCccceecccccccccccCCCCCceeeCchhhcc-CCCCchhhHHHHHHHHHHHHcCCCCCcccC-----CHHHHHHHH
Confidence 6665322 234567999998544 678999999999999999999 78888642 233333333
Q ss_pred hhcCCC-CccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 526 FRERRP-LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 526 ~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
...... .+.. ....+.+++.+||+.+|++|||+.|+++.|+++.
T Consensus 253 ~~~~~~~~~~~-------------~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~ 297 (304)
T cd05101 253 KEGHRMDKPAN-------------CTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRIL 297 (304)
T ss_pred HcCCcCCCCCC-------------CCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHH
Confidence 222111 1111 1234566888899999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-26 Score=226.62 Aligned_cols=207 Identities=20% Similarity=0.274 Sum_probs=155.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||++....++ ..+|+|.++........+.+.+|+.++++++||||+++++++.+++..++||||
T Consensus 5 ~~~lg~g~~g~v~~~~~~~~~-----~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 79 (255)
T cd08219 5 LRVVGEGSFGRALLVQHVNSD-----QKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEY 79 (255)
T ss_pred EEEeeccCCeEEEEEEEcCCC-----ceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEee
Confidence 467999999999999987765 789999987544344457889999999999999999999999999999999999
Q ss_pred ccCCcHHHHHh---------------------------ccc--ccccCCCCccccccCeEEecCCCcc-----------c
Q 007935 427 IRNGSLYAALH---------------------------GFG--LNRLLPGTSKVTKNETIVTSGTGSR-----------I 466 (584)
Q Consensus 427 ~~~GsL~~~L~---------------------------~~g--~~~~~~~~~~i~~~~~~~~~~~~~~-----------~ 466 (584)
+++|+|.+++. +.| |.++.+.|+.+..++..+..+++.. .
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~ 159 (255)
T cd08219 80 CDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACT 159 (255)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeeccccccccc
Confidence 99999976653 222 4566667766666666666666532 1
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcC-CCCccccChhhhhhhh
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER-RPLSEVIDPALVKEIH 545 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~d~~~~~~~~ 545 (584)
..|+..|+|||++.. ..++.++||||||+++|||++|+.||... ............. .+++..++.
T Consensus 160 ~~~~~~~~aPE~~~~-~~~~~~~Dv~slG~i~~~l~~g~~p~~~~-----~~~~~~~~~~~~~~~~~~~~~~~------- 226 (255)
T cd08219 160 YVGTPYYVPPEIWEN-MPYNNKSDIWSLGCILYELCTLKHPFQAN-----SWKNLILKVCQGSYKPLPSHYSY------- 226 (255)
T ss_pred ccCCccccCHHHHcc-CCcCchhhhhhhchhheehhhccCCCCCC-----CHHHHHHHHhcCCCCCCCcccCH-------
Confidence 357788999998544 67899999999999999999999999742 2222222222221 112222222
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCChHHHHHH
Q 007935 546 AKRQVLATFHIALNCTELDPEFRPRMRTVSES 577 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 577 (584)
.+.+++.+||+.||++|||+.|++..
T Consensus 227 ------~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 227 ------ELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred ------HHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 34567778999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-26 Score=229.53 Aligned_cols=215 Identities=23% Similarity=0.308 Sum_probs=157.1
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
...||+|+||.||+|.............||+|.+.........++|.+|++++++++||||+++++++.+++..++||||
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 89 (288)
T cd05050 10 VRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCLLFEY 89 (288)
T ss_pred cccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccEEEEec
Confidence 35799999999999987531111122789999998654444457799999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc-----------------------------------------------c--cccccCCCCccccccCeE
Q 007935 427 IRNGSLYAALHG-----------------------------------------------F--GLNRLLPGTSKVTKNETI 457 (584)
Q Consensus 427 ~~~GsL~~~L~~-----------------------------------------------~--g~~~~~~~~~~i~~~~~~ 457 (584)
+++|+|.++++. . -|+++.+.|+.+..+...
T Consensus 90 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~~~~ 169 (288)
T cd05050 90 MAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGENMVV 169 (288)
T ss_pred CCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEecCCCce
Confidence 999999877742 1 245566666666666666
Q ss_pred EecCCCccc-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHH
Q 007935 458 VTSGTGSRI-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVR 523 (584)
Q Consensus 458 ~~~~~~~~~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~ 523 (584)
+..++|... ...+..|+|||++. +..++.++|||||||++|||++ |..||.+.. ..++..
T Consensus 170 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~-----~~~~~~ 243 (288)
T cd05050 170 KIADFGLSRNIYSADYYKASENDAIPIRWMPPESIF-YNRYTTESDVWAYGVVLWEIFSYGMQPYYGMA-----HEEVIY 243 (288)
T ss_pred EECccccceecccCccccccCCCccChhhcCHHHHh-cCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHH
Confidence 666666432 12345699999854 4679999999999999999998 888886422 223333
Q ss_pred HHhhcCC-CCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHh
Q 007935 524 KAFRERR-PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580 (584)
Q Consensus 524 ~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 580 (584)
....... +.+..+ ..++.+++.+||+.+|++|||+.|+++.|++
T Consensus 244 ~~~~~~~~~~~~~~-------------~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 244 YVRDGNVLSCPDNC-------------PLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred HHhcCCCCCCCCCC-------------CHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 3222211 111111 1345678899999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.5e-26 Score=226.09 Aligned_cols=214 Identities=26% Similarity=0.376 Sum_probs=157.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|.....+. ....||+|.++........+.|.+|+.++++++||||+++++++.+++..++||||
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~~~--~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (267)
T cd05066 9 EKVIGAGEFGEVCSGRLKLPGK--REIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEY 86 (267)
T ss_pred eeeecccCCCceEEEEEecCCC--CceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEc
Confidence 4689999999999998754321 11589999997654444457899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc------------
Q 007935 427 IRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI------------ 466 (584)
Q Consensus 427 ~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~------------ 466 (584)
+++|+|.++++. . -|+++.+.|..+..+...+..+++...
T Consensus 87 ~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 166 (267)
T cd05066 87 MENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTT 166 (267)
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCcccccccccceeeec
Confidence 999999777643 2 256677777766666666666665321
Q ss_pred --ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC-CCCccccChhhhh
Q 007935 467 --SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER-RPLSEVIDPALVK 542 (584)
Q Consensus 467 --~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~d~~~~~ 542 (584)
..++..|+|||++.. ..++.++|||||||++||+++ |+.||..... .+......... .+....++
T Consensus 167 ~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~----- 235 (267)
T cd05066 167 RGGKIPIRWTAPEAIAY-RKFTSASDVWSYGIVMWEVMSYGERPYWEMSN-----QDVIKAIEEGYRLPAPMDCP----- 235 (267)
T ss_pred CCCccceeecCHhHhcc-CccCchhhhHHHHHHHHHHhcCCCCCcccCCH-----HHHHHHHhCCCcCCCCCCCC-----
Confidence 112456999999654 678999999999999999887 9999874321 11222222111 11111111
Q ss_pred hhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhh
Q 007935 543 EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581 (584)
Q Consensus 543 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 581 (584)
..+.+++.+||+.+|++||+|.++++.|+++
T Consensus 236 --------~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 236 --------AALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred --------HHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 2345688889999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=99.94 E-value=3e-26 Score=228.15 Aligned_cols=216 Identities=20% Similarity=0.273 Sum_probs=157.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|...+.........||+|.+...........|.+|+.++++++||||+++++++.+.+..++||||
T Consensus 11 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 90 (288)
T cd05061 11 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMEL 90 (288)
T ss_pred eeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEeC
Confidence 46799999999999986542111223689999987654333446789999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcc-------------------------------------cccccCCCCccccccCeEEecCCCccc---
Q 007935 427 IRNGSLYAALHGF-------------------------------------GLNRLLPGTSKVTKNETIVTSGTGSRI--- 466 (584)
Q Consensus 427 ~~~GsL~~~L~~~-------------------------------------g~~~~~~~~~~i~~~~~~~~~~~~~~~--- 466 (584)
+++|+|.++++.. -|+++.+.|+.+..+...+..+++...
T Consensus 91 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~Dfg~~~~~~ 170 (288)
T cd05061 91 MAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIY 170 (288)
T ss_pred CCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEECcCCcccccc
Confidence 9999998887531 245566666666666666666765322
Q ss_pred ----------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCC-CCcc
Q 007935 467 ----------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERR-PLSE 534 (584)
Q Consensus 467 ----------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~~ 534 (584)
..++..|+|||.+.. ..++.++|||||||++|||++ |+.||.... ..++......... ....
T Consensus 171 ~~~~~~~~~~~~~~~~y~~pE~~~~-~~~~~~~DvwslG~~l~el~~~~~~p~~~~~-----~~~~~~~~~~~~~~~~~~ 244 (288)
T cd05061 171 ETDYYRKGGKGLLPVRWMAPESLKD-GVFTTSSDMWSFGVVLWEITSLAEQPYQGLS-----NEQVLKFVMDGGYLDQPD 244 (288)
T ss_pred ccccccccCCCcccccccCHHHhcc-CCCChHhHHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHcCCCCCCCC
Confidence 123567999998554 578999999999999999999 788886422 2222222222211 1111
Q ss_pred ccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhh
Q 007935 535 VIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581 (584)
Q Consensus 535 ~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 581 (584)
..+ ..+.+++.+||+.||++|||+.++++.|++.
T Consensus 245 ~~~-------------~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 245 NCP-------------ERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred CCC-------------HHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 111 2456688889999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.1e-27 Score=247.61 Aligned_cols=206 Identities=20% Similarity=0.274 Sum_probs=156.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCC-------
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYAND------- 418 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~------- 418 (584)
.+.||+|+||+||+|+....+ +.||||++.... .......+.+|+.++..++|+|||++++.+...+
T Consensus 37 ~~~LG~G~fG~Vy~a~~~~~g-----~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~ 111 (496)
T PTZ00283 37 SRVLGSGATGTVLCAKRVSDG-----EPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENV 111 (496)
T ss_pred EEEEecCCCEEEEEEEEcCCC-----CEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccc
Confidence 467999999999999987665 899999997642 3334467899999999999999999998776433
Q ss_pred -ceeEeeecccCCcHHHHHhc-----------------------------c--cccccCCCCccccccCeEEecCCCcc-
Q 007935 419 -EKLLISDFIRNGSLYAALHG-----------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSR- 465 (584)
Q Consensus 419 -~~~lV~Ey~~~GsL~~~L~~-----------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~- 465 (584)
..++||||+++|+|.++|+. . -|+++++.|+.+..++.++..+||..
T Consensus 112 ~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFGls~ 191 (496)
T PTZ00283 112 LMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSK 191 (496)
T ss_pred eEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEecccCe
Confidence 26799999999999776642 2 36778888888877777777777642
Q ss_pred ------------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcC-CCC
Q 007935 466 ------------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER-RPL 532 (584)
Q Consensus 466 ------------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~-~~~ 532 (584)
...||+.|+|||++.. ..++.++|||||||++|||++|+.||... ....++....... .++
T Consensus 192 ~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~-~~~s~k~DVwSlGvilyeLltG~~Pf~~~-----~~~~~~~~~~~~~~~~~ 265 (496)
T PTZ00283 192 MYAATVSDDVGRTFCGTPYYVAPEIWRR-KPYSKKADMFSLGVLLYELLTLKRPFDGE-----NMEEVMHKTLAGRYDPL 265 (496)
T ss_pred eccccccccccccccCCcceeCHHHhCC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCC-----CHHHHHHHHhcCCCCCC
Confidence 2358999999999554 67999999999999999999999999742 3334444433322 122
Q ss_pred ccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 533 SEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 533 ~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+..+++ .+.+++.+||+.||++||++.++++
T Consensus 266 ~~~~~~-------------~l~~li~~~L~~dP~~RPs~~ell~ 296 (496)
T PTZ00283 266 PPSISP-------------EMQEIVTALLSSDPKRRPSSSKLLN 296 (496)
T ss_pred CCCCCH-------------HHHHHHHHHcccChhhCcCHHHHHh
Confidence 233333 3445777799999999999999975
|
|
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.8e-27 Score=245.23 Aligned_cols=158 Identities=21% Similarity=0.312 Sum_probs=131.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|+....+ +.||+|++.... .....+.+.+|++++++++|||||++++++.+++..++||
T Consensus 6 ~~~LG~G~~g~Vy~a~~~~~~-----~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (382)
T cd05625 6 IKTLGIGAFGEVCLARKVDTK-----ALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 80 (382)
T ss_pred EEEEEeCCCEEEEEEEECCCC-----CEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEE
Confidence 467999999999999987765 799999997642 2233467899999999999999999999999999999999
Q ss_pred ecccCCcHHHHHhc-------------------------c--cccccCCCCccccccCeEEecCCCcc------------
Q 007935 425 DFIRNGSLYAALHG-------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSR------------ 465 (584)
Q Consensus 425 Ey~~~GsL~~~L~~-------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~------------ 465 (584)
|||++|+|.++++. . -|+++++.|+.+..++.++..++|..
T Consensus 81 E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~ 160 (382)
T cd05625 81 DYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY 160 (382)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCcccccccccccc
Confidence 99999999766542 2 36777888887777777777666531
Q ss_pred ----------------------------------------------cccCCCcccCccccccCCCCCCccchhhHHHHHH
Q 007935 466 ----------------------------------------------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLL 499 (584)
Q Consensus 466 ----------------------------------------------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ 499 (584)
...||+.|||||++.. ..++.++|||||||++|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~DiwSlGvil~ 239 (382)
T cd05625 161 QSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLR-TGYTQLCDWWSVGVILY 239 (382)
T ss_pred ccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcC-CCCCCeeeEEechHHHH
Confidence 1258999999999554 68999999999999999
Q ss_pred HHHhCCCCCCC
Q 007935 500 EILTGRLPDAG 510 (584)
Q Consensus 500 ElltG~~p~~~ 510 (584)
||+||+.||..
T Consensus 240 elltG~~Pf~~ 250 (382)
T cd05625 240 EMLVGQPPFLA 250 (382)
T ss_pred HHHhCCCCCCC
Confidence 99999999975
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-26 Score=227.12 Aligned_cols=211 Identities=18% Similarity=0.275 Sum_probs=149.6
Q ss_pred eceeecCceEEEEEecCCC-------CCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCcee
Q 007935 349 VVGKSKNGIMYKVVVGRGS-------GMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKL 421 (584)
Q Consensus 349 ~iG~G~~g~Vy~~~~~~~~-------~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~ 421 (584)
.||+|+||.||+|+..... .......||+|.+..... ...+.|.+|+.+++.++|||||++++++.++...+
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~-~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHR-DISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhh-hHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 5899999999999864321 112235699998876432 23467899999999999999999999999999999
Q ss_pred EeeecccCCcHHHHHh--------------------------ccc--ccccCCCCccccccCe-------EEecCCCcc-
Q 007935 422 LISDFIRNGSLYAALH--------------------------GFG--LNRLLPGTSKVTKNET-------IVTSGTGSR- 465 (584)
Q Consensus 422 lV~Ey~~~GsL~~~L~--------------------------~~g--~~~~~~~~~~i~~~~~-------~~~~~~~~~- 465 (584)
+||||+++|+|..+++ +.| |+++.+.|+.+..++. ++..+++..
T Consensus 81 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~ 160 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPI 160 (262)
T ss_pred EEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCc
Confidence 9999999999866554 223 5677777776654332 444555532
Q ss_pred ------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHH-hCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccCh
Q 007935 466 ------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEIL-TGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDP 538 (584)
Q Consensus 466 ------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ell-tG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~ 538 (584)
...++..|+|||++..+..++.++|||||||++|||+ +|+.||..... .+.. ........ ...+
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-----~~~~-~~~~~~~~---~~~~ 231 (262)
T cd05077 161 TVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTL-----AEKE-RFYEGQCM---LVTP 231 (262)
T ss_pred cccCcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcch-----hHHH-HHHhcCcc---CCCC
Confidence 2347788999998665567899999999999999998 58888764221 1111 11111111 1111
Q ss_pred hhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHH
Q 007935 539 ALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579 (584)
Q Consensus 539 ~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~ 579 (584)
. ...+.+++.+||+.||++||++.+|++.++
T Consensus 232 ~----------~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 232 S----------CKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred C----------hHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 1 124567888999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.4e-27 Score=242.30 Aligned_cols=205 Identities=18% Similarity=0.300 Sum_probs=152.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|+....+ +.||||+++... .....+.+.+|++++..++|||||++++++.+++..++||
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 6 IKVIGRGAFGEVRLVQKKDTG-----HIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred EEEEEecCCEEEEEEEECCCC-----CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 467999999999999987765 799999997542 2233466889999999999999999999999999999999
Q ss_pred ecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCccc-----------
Q 007935 425 DFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI----------- 466 (584)
Q Consensus 425 Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~----------- 466 (584)
||+++|+|.++++ +. -|+++++.|+.+..++.++..++|...
T Consensus 81 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 160 (364)
T cd05599 81 EYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFY 160 (364)
T ss_pred CCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceecccccccccc
Confidence 9999999976664 22 357777778777767766666665321
Q ss_pred --------------------------------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCC
Q 007935 467 --------------------------------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPD 508 (584)
Q Consensus 467 --------------------------------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~ 508 (584)
..||+.|||||++.. ..++.++|||||||++|||++|+.||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~el~~G~~Pf 239 (364)
T cd05599 161 RILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQ-TGYNKECDWWSLGVIMYEMLVGYPPF 239 (364)
T ss_pred ccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcC-CCCCCeeeeecchhHHHHhhcCCCCC
Confidence 248999999999554 67899999999999999999999999
Q ss_pred CCCCCCCCcHHHHHHHHhhcCCC--Ccc--ccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCC---hHHHHH
Q 007935 509 AGPENDGKGLESLVRKAFRERRP--LSE--VIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPR---MRTVSE 576 (584)
Q Consensus 509 ~~~~~~~~~l~~~~~~~~~~~~~--~~~--~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt---~~ev~~ 576 (584)
.... .............. .+. .+++ .+.+++.+|+. +|.+|++ +.|+++
T Consensus 240 ~~~~-----~~~~~~~i~~~~~~~~~~~~~~~s~-------------~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 240 CSDN-----PQETYRKIINWKETLQFPDEVPLSP-------------EAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred CCCC-----HHHHHHHHHcCCCccCCCCCCCCCH-------------HHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 7532 22222222221111 111 1122 23345666776 8999997 888765
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.2e-26 Score=228.51 Aligned_cols=231 Identities=21% Similarity=0.281 Sum_probs=156.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC--CceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN--DEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~--~~~~lV~ 424 (584)
.+.||+|+||+||++..... .......||+|.++........+.|.+|++++++++||||+++++++... ...++||
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~ 87 (283)
T cd05080 9 IRVLGEGHFGKVSLYCYDPA-NDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIM 87 (283)
T ss_pred ceecccCCCcEEEEeeEccc-cCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEEe
Confidence 35799999999988764321 11122789999998654433457899999999999999999999998764 3578999
Q ss_pred ecccCCcHHHHHh------------------------ccc--ccccCCCCccccccCeEEecCCCccc------------
Q 007935 425 DFIRNGSLYAALH------------------------GFG--LNRLLPGTSKVTKNETIVTSGTGSRI------------ 466 (584)
Q Consensus 425 Ey~~~GsL~~~L~------------------------~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~------------ 466 (584)
||+++|+|.++++ +.| |+++.+.|+.+..+...+..+++...
T Consensus 88 e~~~~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 167 (283)
T cd05080 88 EYVPLGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVR 167 (283)
T ss_pred cCCCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCCcchhhccC
Confidence 9999999976654 333 56677777777666666666665322
Q ss_pred --ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcC--CCCccccChhhhh
Q 007935 467 --SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER--RPLSEVIDPALVK 542 (584)
Q Consensus 467 --~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~d~~~~~ 542 (584)
..++..|+|||+... ..++.++|||||||++|||+||+.||...... ............ ..+.+..+.....
T Consensus 168 ~~~~~~~~~~~PE~~~~-~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (283)
T cd05080 168 EDGDSPVFWYAVECLKE-NKFSYASDVWSFGVTLYELLTHCDSKQSPPKK---FEEMIGPKQGQMTVVRLIELLERGMRL 243 (283)
T ss_pred CCCCCCceeeCHhHhcc-cCCCcccccHHHHHHHHHHHhCCCCCCCCcch---hhhhhcccccccchhhhhhhhhcCCCC
Confidence 124556999998554 67899999999999999999999998643221 111100000000 0000000000000
Q ss_pred hhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 543 EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 543 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
.........+.+++..||+.+|++|||++++++.|+++++
T Consensus 244 -~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~~ 283 (283)
T cd05080 244 -PCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMHH 283 (283)
T ss_pred -CCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhhC
Confidence 0001122456778999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-26 Score=235.46 Aligned_cols=158 Identities=22% Similarity=0.293 Sum_probs=124.0
Q ss_pred eeceee--cCceEEEEEecCCCCCCCceEEEEEEecCCCc-chhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 348 YVVGKS--KNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 348 ~~iG~G--~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~-~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
++||+| +|++||++....++ +.||+|+++.... ....+.+.+|+++++.++|||||+++++|..++..++||
T Consensus 4 ~~ig~G~~~~~~v~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 78 (327)
T cd08227 4 TVIGRGFEDLMTVNLARYKPTG-----EYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVT 78 (327)
T ss_pred hhccccccceEEEEEEeecccC-----cEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEE
Confidence 469999 67899999988776 8999999976532 233456778999999999999999999999999999999
Q ss_pred ecccCCcHHHHHh---------------------------cc--cccccCCCCccccccCeEEecCCCc-----------
Q 007935 425 DFIRNGSLYAALH---------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGS----------- 464 (584)
Q Consensus 425 Ey~~~GsL~~~L~---------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~----------- 464 (584)
||+++|+|.+++. .. -|+++++.|+.+..+..++..+++.
T Consensus 79 e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~ 158 (327)
T cd08227 79 SFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRL 158 (327)
T ss_pred eccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhccccccccc
Confidence 9999999976663 22 3567777777666555554444321
Q ss_pred -------ccccCCCcccCccccccC-CCCCCccchhhHHHHHHHHHhCCCCCCC
Q 007935 465 -------RISAISNVYLAPEARIYG-SKFTQKCDVYSFGIVLLEILTGRLPDAG 510 (584)
Q Consensus 465 -------~~~~gt~~y~aPE~~~~~-~~~~~ksDV~SfGvvl~ElltG~~p~~~ 510 (584)
....++..|+|||++..+ ..++.++|||||||++|||++|+.||..
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 212 (327)
T cd08227 159 RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD 212 (327)
T ss_pred cccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 112456679999996543 3589999999999999999999999975
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.8e-27 Score=230.28 Aligned_cols=206 Identities=19% Similarity=0.308 Sum_probs=153.7
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeecc
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 427 (584)
+.||+|+||.||+|....++ ..||+|.+.........+.+.+|++++++++||||+++++++..++..++||||+
T Consensus 10 ~~l~~g~~~~vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 10 ERIGKGSFGEVYKGIDNRTK-----EVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHhcCCCCeeEEEEEEcCCC-----eEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 45999999999999987655 7899999876544444578999999999999999999999999999999999999
Q ss_pred cCCcHHHHHh------------------------ccc--ccccCCCCccccccCeEEecCCCccc-----------ccCC
Q 007935 428 RNGSLYAALH------------------------GFG--LNRLLPGTSKVTKNETIVTSGTGSRI-----------SAIS 470 (584)
Q Consensus 428 ~~GsL~~~L~------------------------~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~-----------~~gt 470 (584)
++|+|.++++ ..| |+++.++|+.+..+......+++... ..++
T Consensus 85 ~~~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 164 (277)
T cd06642 85 GGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGT 164 (277)
T ss_pred CCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcchhhhcccCc
Confidence 9999976653 223 56667777777666666666665321 2467
Q ss_pred CcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHHHH
Q 007935 471 NVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQV 550 (584)
Q Consensus 471 ~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 550 (584)
..|+|||++.. ..++.++|||||||++|||+||+.||...... ........... ..... ...
T Consensus 165 ~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-----~~~~~~~~~~~---~~~~~---------~~~ 226 (277)
T cd06642 165 PFWMAPEVIKQ-SAYDFKADIWSLGITAIELAKGEPPNSDLHPM-----RVLFLIPKNSP---PTLEG---------QYS 226 (277)
T ss_pred ccccCHHHhCc-CCCchhhhHHHHHHHHHHHHhCCCCCcccchh-----hHHhhhhcCCC---CCCCc---------ccC
Confidence 78999999554 67899999999999999999999998643211 11111111110 11111 112
Q ss_pred HHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 551 LATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 551 ~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
..+.+++.+||+.+|++||+|.++++
T Consensus 227 ~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 227 KPFKEFVEACLNKDPRFRPTAKELLK 252 (277)
T ss_pred HHHHHHHHHHccCCcccCcCHHHHHH
Confidence 34567888899999999999999987
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.1e-26 Score=230.18 Aligned_cols=218 Identities=23% Similarity=0.302 Sum_probs=158.1
Q ss_pred cceeceeecCceEEEEEecCCCC--CCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeE
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSG--MGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLL 422 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~--~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~l 422 (584)
..+.||+|+||.||+++..+.+. ......||+|.++........+++.+|++++.++ +||||++++++|...+..++
T Consensus 22 i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~l 101 (307)
T cd05098 22 LGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYV 101 (307)
T ss_pred EeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEE
Confidence 35679999999999998654221 1122579999998654344456789999999999 89999999999999999999
Q ss_pred eeecccCCcHHHHHhc-----------------------------------------c--cccccCCCCccccccCeEEe
Q 007935 423 ISDFIRNGSLYAALHG-----------------------------------------F--GLNRLLPGTSKVTKNETIVT 459 (584)
Q Consensus 423 V~Ey~~~GsL~~~L~~-----------------------------------------~--g~~~~~~~~~~i~~~~~~~~ 459 (584)
||||+++|+|.++++. . -|+++.+.|+.+..+..++.
T Consensus 102 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL 181 (307)
T cd05098 102 IVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKI 181 (307)
T ss_pred EEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcCCCcEEE
Confidence 9999999999877753 1 24556666666666666666
Q ss_pred cCCCccc-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHH
Q 007935 460 SGTGSRI-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKA 525 (584)
Q Consensus 460 ~~~~~~~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~ 525 (584)
.+++... ..++..|||||++.. ..++.++|||||||++|||++ |..||... ...++....
T Consensus 182 ~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~~~g~~p~~~~-----~~~~~~~~~ 255 (307)
T cd05098 182 ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-----PVEELFKLL 255 (307)
T ss_pred CCCcccccccccchhhccccCCCccceeChHHhcc-CCCCcHHHHHHHHHHHHHHHcCCCCCCCcC-----CHHHHHHHH
Confidence 6665332 123457999998544 678999999999999999998 88888642 223333322
Q ss_pred hhcCC-CCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 526 FRERR-PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 526 ~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
..... ..+...+ ..+.+++.+||+.+|++||||.||++.|+++.
T Consensus 256 ~~~~~~~~~~~~~-------------~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~ 300 (307)
T cd05098 256 KEGHRMDKPSNCT-------------NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 300 (307)
T ss_pred HcCCCCCCCCcCC-------------HHHHHHHHHHcccChhhCcCHHHHHHHHHHHH
Confidence 22111 1111112 24456788899999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-26 Score=227.08 Aligned_cols=209 Identities=21% Similarity=0.275 Sum_probs=150.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
...||+|+||.||+|...+++ ..||+|.+..... ...+.+.+|++++++++|+||+++++++..++..++||||
T Consensus 13 ~~~lg~g~~g~v~~~~~~~~~-----~~v~~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 86 (268)
T cd06624 13 RVVLGKGTYGIVYAARDLSTQ-----VRIAIKEIPERDS-RYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQ 86 (268)
T ss_pred eEEEecCCceEEEEeEecCCC-----cEEEEEEecCCCH-HHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEec
Confidence 357999999999999987665 7899999876432 2347899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcc----------------------------c--ccccCCCCccccc-cCeEEecCCCcc----------
Q 007935 427 IRNGSLYAALHGF----------------------------G--LNRLLPGTSKVTK-NETIVTSGTGSR---------- 465 (584)
Q Consensus 427 ~~~GsL~~~L~~~----------------------------g--~~~~~~~~~~i~~-~~~~~~~~~~~~---------- 465 (584)
+++++|.++++.. | |+++.+.|+.+.. +...+..+++..
T Consensus 87 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~ 166 (268)
T cd06624 87 VPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCT 166 (268)
T ss_pred CCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCCCcc
Confidence 9999998777531 2 3445555555543 334555555422
Q ss_pred -cccCCCcccCccccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhh
Q 007935 466 -ISAISNVYLAPEARIYG-SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKE 543 (584)
Q Consensus 466 -~~~gt~~y~aPE~~~~~-~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~ 543 (584)
...|+..|+|||++..+ ..++.++|||||||++|||++|+.||....... ...+..........++..+++
T Consensus 167 ~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~----- 239 (268)
T cd06624 167 ETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQ--AAMFKVGMFKIHPEIPESLSA----- 239 (268)
T ss_pred ccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChh--hhHhhhhhhccCCCCCcccCH-----
Confidence 13478889999986443 247899999999999999999999987432211 111111111111222222332
Q ss_pred hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 544 IHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 544 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
++.+++.+||+.+|++|||+.|++.
T Consensus 240 --------~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 240 --------EAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred --------HHHHHHHHHcCCCchhCCCHHHHHh
Confidence 3445777899999999999999875
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-26 Score=236.05 Aligned_cols=222 Identities=18% Similarity=0.261 Sum_probs=150.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC-CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCC-----ce
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARVQHPNIVRLKAFYYAND-----EK 420 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~-----~~ 420 (584)
.+.||+|+||.||+|+....+ ..||||+++.. ........+.+|++++++++|||||++++++...+ ..
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 79 (338)
T cd07859 5 QEVIGKGSYGVVCSAIDTHTG-----EKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI 79 (338)
T ss_pred EEEEeecCCeEEEEEEECCCC-----CEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceE
Confidence 467999999999999987665 79999998753 22223367899999999999999999999986533 47
Q ss_pred eEeeecccCCcHHHHH-------------------------hccc--ccccCCCCccccccCeEEecCCCccc-------
Q 007935 421 LLISDFIRNGSLYAAL-------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSRI------- 466 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~~L-------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~------- 466 (584)
++|||||. ++|.+++ |+.| |+++++.|+.+..++.++..++|...
T Consensus 80 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~ 158 (338)
T cd07859 80 YVVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 158 (338)
T ss_pred EEEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccccC
Confidence 99999996 5775444 4444 57778888777777777777776421
Q ss_pred -------ccCCCcccCcccccc-CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC--Ccccc
Q 007935 467 -------SAISNVYLAPEARIY-GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP--LSEVI 536 (584)
Q Consensus 467 -------~~gt~~y~aPE~~~~-~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~ 536 (584)
..||..|+|||++.. ...++.++|||||||++|||+||+.||.+.... .....+......... ...+.
T Consensus 159 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~i~ 236 (338)
T cd07859 159 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVV--HQLDLITDLLGTPSPETISRVR 236 (338)
T ss_pred ccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChH--HHHHHHHHHhCCCCHHHHHHhh
Confidence 257889999998543 146899999999999999999999999753210 111111111000000 00000
Q ss_pred Chhhhhhh-----------hH--HHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 537 DPALVKEI-----------HA--KRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 537 d~~~~~~~-----------~~--~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+....... .. ......+.+++.+||+.||++|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~ 289 (338)
T cd07859 237 NEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALA 289 (338)
T ss_pred hhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 00000000 00 001134568899999999999999999985
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.6e-26 Score=227.58 Aligned_cols=219 Identities=16% Similarity=0.221 Sum_probs=158.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEe-CCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYA-NDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~-~~~~~lV~E 425 (584)
.++||+|+||.||+|.....+ ......|++|++.........+.+.+|+.++++++||||+++++++.+ +...++++|
T Consensus 11 ~~~i~~g~~g~V~~~~~~~~~-~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 89 (280)
T cd05043 11 SDLLQEGTFGRIFYGILIDEK-PGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPFVLYP 89 (280)
T ss_pred eeeecccCCceEEEEEEecCC-CCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCEEEEE
Confidence 468999999999999987621 111278999998765444556789999999999999999999999876 467899999
Q ss_pred cccCCcHHHHHhcc-----------------------------------cccccCCCCccccccCeEEecCCCccc----
Q 007935 426 FIRNGSLYAALHGF-----------------------------------GLNRLLPGTSKVTKNETIVTSGTGSRI---- 466 (584)
Q Consensus 426 y~~~GsL~~~L~~~-----------------------------------g~~~~~~~~~~i~~~~~~~~~~~~~~~---- 466 (584)
|+++|+|.+++... -|+++.+.|..+..+...+..+++...
T Consensus 90 ~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~ 169 (280)
T cd05043 90 YMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNALSRDLFP 169 (280)
T ss_pred cCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCCCcccccC
Confidence 99999998887431 235555566555555556666655322
Q ss_pred ---------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCCCcccc
Q 007935 467 ---------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVI 536 (584)
Q Consensus 467 ---------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 536 (584)
..++..|+|||++.. ..++.++|||||||++||+++ |+.||.... ..++....... .....
T Consensus 170 ~~~~~~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-----~~~~~~~~~~~-~~~~~-- 240 (280)
T cd05043 170 MDYHCLGDNENRPVKWMALESLVN-KEYSSASDVWSFGVLLWELMTLGQTPYVEID-----PFEMAAYLKDG-YRLAQ-- 240 (280)
T ss_pred CceEEeCCCCCcchhccCHHHHhc-CCCCchhhHHHhHHHHHHHhcCCCCCcCcCC-----HHHHHHHHHcC-CCCCC--
Confidence 234567999998544 678999999999999999999 999997421 12222221111 11111
Q ss_pred ChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhcC
Q 007935 537 DPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKLQ 584 (584)
Q Consensus 537 d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~ 584 (584)
... ....+.+++.+||..||++|||+.|+++.|+.+..+
T Consensus 241 ~~~---------~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 241 PIN---------CPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred CCc---------CCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 000 112456788889999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.9e-27 Score=244.57 Aligned_cols=158 Identities=22% Similarity=0.328 Sum_probs=130.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||++.....+ +.||||++.... .....+.+.+|++++++++|||||++++++.+.+..|+||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 6 VKVIGKGAFGEVRLVQKKDTG-----KIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred eEEEeecCCEEEEEEEECCCC-----CEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 367999999999999987765 799999986532 2233467889999999999999999999999999999999
Q ss_pred ecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCccc-----------
Q 007935 425 DFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI----------- 466 (584)
Q Consensus 425 Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~----------- 466 (584)
||+++|+|.+++. +. .|+++++.|+.+..++.++..++|...
T Consensus 81 E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~ 160 (377)
T cd05629 81 EFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYY 160 (377)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeecccccccccccccccc
Confidence 9999999976653 33 357788888777766666666665321
Q ss_pred -----------------------------------------------ccCCCcccCccccccCCCCCCccchhhHHHHHH
Q 007935 467 -----------------------------------------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLL 499 (584)
Q Consensus 467 -----------------------------------------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ 499 (584)
..||+.|+|||++.. ..++.++|||||||++|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ 239 (377)
T cd05629 161 QKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQ-QGYGQECDWWSLGAIMF 239 (377)
T ss_pred cccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHcc-CCCCCceeeEecchhhh
Confidence 358999999999554 68999999999999999
Q ss_pred HHHhCCCCCCC
Q 007935 500 EILTGRLPDAG 510 (584)
Q Consensus 500 ElltG~~p~~~ 510 (584)
||+||+.||..
T Consensus 240 elltG~~Pf~~ 250 (377)
T cd05629 240 ECLIGWPPFCS 250 (377)
T ss_pred hhhcCCCCCCC
Confidence 99999999975
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.9e-27 Score=223.83 Aligned_cols=206 Identities=23% Similarity=0.315 Sum_probs=156.7
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCC--CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG--DATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
+.||.|.-|+||.+.+.+.. ...|+|++.+. .......+...|-+||+.++||.++.||+.++.++..++|||
T Consensus 83 k~LG~GdiG~VyL~~l~~t~-----~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~me 157 (459)
T KOG0610|consen 83 KRLGCGDIGTVYLVELRGTN-----CLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVME 157 (459)
T ss_pred HHcCCCCceeEEEEEecCCC-----ceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEe
Confidence 46999999999999998876 89999999876 223344667789999999999999999999999999999999
Q ss_pred cccCCcHH---------------------------HHHhcccc--cccCCCCccccccCeEEecCCC-------------
Q 007935 426 FIRNGSLY---------------------------AALHGFGL--NRLLPGTSKVTKNETIVTSGTG------------- 463 (584)
Q Consensus 426 y~~~GsL~---------------------------~~L~~~g~--~~~~~~~~~i~~~~~~~~~~~~------------- 463 (584)
||+||+|+ +|||-.|+ +|++++|+.|..+++++.+||.
T Consensus 158 yCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~ 237 (459)
T KOG0610|consen 158 YCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVK 237 (459)
T ss_pred cCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCCCCeeec
Confidence 99999993 66776665 8899998877766665543321
Q ss_pred ------------------------------------------------------cccccCCCcccCccccccCCCCCCcc
Q 007935 464 ------------------------------------------------------SRISAISNVYLAPEARIYGSKFTQKC 489 (584)
Q Consensus 464 ------------------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~ks 489 (584)
+...+||-.|+|||+ ..|...+.++
T Consensus 238 s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEv-I~G~GHgsAV 316 (459)
T KOG0610|consen 238 SSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEV-IRGEGHGSAV 316 (459)
T ss_pred cCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCcccccccccccccccee-eecCCCCchh
Confidence 011268888999999 5567889999
Q ss_pred chhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCC
Q 007935 490 DVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRP 569 (584)
Q Consensus 490 DV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RP 569 (584)
|.|+|||++|||+.|+.||.+...+ +.+..++.....+++.- . -...+-+|+.+.|.+||.+|.
T Consensus 317 DWWtfGIflYEmLyG~TPFKG~~~~-----~Tl~NIv~~~l~Fp~~~--~---------vs~~akDLIr~LLvKdP~kRl 380 (459)
T KOG0610|consen 317 DWWTFGIFLYEMLYGTTPFKGSNNK-----ETLRNIVGQPLKFPEEP--E---------VSSAAKDLIRKLLVKDPSKRL 380 (459)
T ss_pred hHHHHHHHHHHHHhCCCCcCCCCch-----hhHHHHhcCCCcCCCCC--c---------chhHHHHHHHHHhccChhhhh
Confidence 9999999999999999999875443 23344444333333221 1 112334577779999999998
Q ss_pred C----hHHHH
Q 007935 570 R----MRTVS 575 (584)
Q Consensus 570 t----~~ev~ 575 (584)
- +.||-
T Consensus 381 g~~rGA~eIK 390 (459)
T KOG0610|consen 381 GSKRGAAEIK 390 (459)
T ss_pred ccccchHHhh
Confidence 7 55553
|
|
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.9e-27 Score=239.85 Aligned_cols=207 Identities=17% Similarity=0.236 Sum_probs=155.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+++...++ +.||+|++.... .....+.+.+|+.+++.++||||+++++++.+++..++||
T Consensus 48 ~~~lg~G~~g~Vy~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv~ 122 (370)
T cd05596 48 IKVIGRGAFGEVQLVRHKSSK-----QVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMVM 122 (370)
T ss_pred EEEEeeCCCEEEEEEEECCCC-----CEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEE
Confidence 467999999999999988765 799999997531 2222356889999999999999999999999999999999
Q ss_pred ecccCCcHHHHHh------------------------ccc--ccccCCCCccccccCeEEecCCCcc------------c
Q 007935 425 DFIRNGSLYAALH------------------------GFG--LNRLLPGTSKVTKNETIVTSGTGSR------------I 466 (584)
Q Consensus 425 Ey~~~GsL~~~L~------------------------~~g--~~~~~~~~~~i~~~~~~~~~~~~~~------------~ 466 (584)
||+++|+|.++++ +.| |+++++.|+.+..++.++..++|.. .
T Consensus 123 Ey~~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~~~~~ 202 (370)
T cd05596 123 EYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVRCDT 202 (370)
T ss_pred cCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCcccCCC
Confidence 9999999976654 333 5777788887777777777776532 2
Q ss_pred ccCCCcccCccccccC---CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC--Ccc--ccChh
Q 007935 467 SAISNVYLAPEARIYG---SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP--LSE--VIDPA 539 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~---~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~--~~~--~~d~~ 539 (584)
..||+.|||||++... ..++.++|||||||++|||++|+.||.... .............. ++. .+++
T Consensus 203 ~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~-----~~~~~~~i~~~~~~~~~~~~~~~s~- 276 (370)
T cd05596 203 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS-----LVGTYSKIMDHKNSLTFPDDIEISK- 276 (370)
T ss_pred CCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCC-----HHHHHHHHHcCCCcCCCCCcCCCCH-
Confidence 3589999999985432 247899999999999999999999997522 22233333322211 111 1122
Q ss_pred hhhhhhHHHHHHHHHHHHhcccCCCCCC--CCChHHHHH
Q 007935 540 LVKEIHAKRQVLATFHIALNCTELDPEF--RPRMRTVSE 576 (584)
Q Consensus 540 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~--RPt~~ev~~ 576 (584)
.+.+++.+|++.+|++ |||+.|+++
T Consensus 277 ------------~~~~li~~~L~~~p~r~~R~s~~ell~ 303 (370)
T cd05596 277 ------------QAKDLICAFLTDREVRLGRNGVDEIKS 303 (370)
T ss_pred ------------HHHHHHHHHccChhhccCCCCHHHHhc
Confidence 3445777799999987 999999974
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.1e-28 Score=241.75 Aligned_cols=208 Identities=21% Similarity=0.316 Sum_probs=163.3
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeecc
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 427 (584)
..||.|+||.||||..+.++ ...|.|.+.. ......++|+-||+||+..+||+||+|++.|+.++..++..|||
T Consensus 38 GELGDGAFGKVyKA~nket~-----~lAAaKvIet-kseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC 111 (1187)
T KOG0579|consen 38 GELGDGAFGKVYKAVNKETK-----LLAAAKVIET-KSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFC 111 (1187)
T ss_pred hhhcCccchhhhhhhcccch-----hhhhhhhhcc-cchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeec
Confidence 35899999999999988775 5567777765 44556689999999999999999999999999999999999999
Q ss_pred cCCcH--------------------------HHHHhcc--cccccCCCCccccccCeEEecCCCccc-----------cc
Q 007935 428 RNGSL--------------------------YAALHGF--GLNRLLPGTSKVTKNETIVTSGTGSRI-----------SA 468 (584)
Q Consensus 428 ~~GsL--------------------------~~~L~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~-----------~~ 468 (584)
.||-+ ..|||+. .|++++++|+.+..++.+...+||.+. ..
T Consensus 112 ~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDsFI 191 (1187)
T KOG0579|consen 112 GGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDSFI 191 (1187)
T ss_pred CCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchhHHhhhcccc
Confidence 99976 3566654 579999999999999999998888532 48
Q ss_pred CCCcccCcccccc----CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhh
Q 007935 469 ISNVYLAPEARIY----GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEI 544 (584)
Q Consensus 469 gt~~y~aPE~~~~----~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~ 544 (584)
||+.|||||+.+. ...|+.++||||||++|.||..+.+|... .+....+.++....+ +..+.|.-..
T Consensus 192 GTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhe-----lnpMRVllKiaKSeP--PTLlqPS~Ws-- 262 (1187)
T KOG0579|consen 192 GTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHE-----LNPMRVLLKIAKSEP--PTLLQPSHWS-- 262 (1187)
T ss_pred CCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccc-----cchHHHHHHHhhcCC--CcccCcchhh--
Confidence 9999999998542 36899999999999999999999999653 233333333333332 2333333211
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
..+-++..+|+.+||..||+++++++
T Consensus 263 ------~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 263 ------RSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred ------hHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 23445777899999999999999975
|
|
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.2e-27 Score=229.91 Aligned_cols=212 Identities=17% Similarity=0.203 Sum_probs=151.1
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|+...++ +.||+|++..... ...+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 14 ~~~lg~g~~g~vy~~~~~~~~-----~~~aik~~~~~~~-~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 14 IQRVGSGTYGDVYKARNLHTG-----ELAAVKIIKLEPG-DDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hheeecCCCeEEEEEEECCCC-----eEEEEEEEecCcc-chHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence 357999999999999987665 7999999975432 2336788999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc-------------------------cc--ccccCCCCccccccCeEEecCCCcc-----------ccc
Q 007935 427 IRNGSLYAALHG-------------------------FG--LNRLLPGTSKVTKNETIVTSGTGSR-----------ISA 468 (584)
Q Consensus 427 ~~~GsL~~~L~~-------------------------~g--~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~~ 468 (584)
+++|+|.++++. .| |+++.+.|+.+..+...+..+++.. ...
T Consensus 88 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 167 (267)
T cd06646 88 CGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRKSFI 167 (267)
T ss_pred CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeecccccccCccc
Confidence 999999877642 22 4556666666665566666666532 124
Q ss_pred CCCcccCccccc--cCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhH
Q 007935 469 ISNVYLAPEARI--YGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 546 (584)
Q Consensus 469 gt~~y~aPE~~~--~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 546 (584)
|+..|+|||.+. ....++.++|||||||++|||++|+.||....... ... .............++
T Consensus 168 ~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~----~~~-~~~~~~~~~~~~~~~-------- 234 (267)
T cd06646 168 GTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR----ALF-LMSKSNFQPPKLKDK-------- 234 (267)
T ss_pred cCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhh----hhe-eeecCCCCCCCCccc--------
Confidence 678899999853 23457889999999999999999999986432111 000 000000000000000
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCChHHHHHH
Q 007935 547 KRQVLATFHIALNCTELDPEFRPRMRTVSES 577 (584)
Q Consensus 547 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 577 (584)
......+.+++.+||+.+|++|||++++++.
T Consensus 235 ~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 265 (267)
T cd06646 235 TKWSSTFHNFVKISLTKNPKKRPTAERLLTH 265 (267)
T ss_pred cccCHHHHHHHHHHhhCChhhCcCHHHHhcC
Confidence 0011245678888999999999999999864
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.3e-26 Score=223.74 Aligned_cols=208 Identities=25% Similarity=0.390 Sum_probs=152.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|...++ ..||+|+++..... .++|.+|++++++++||||+++++++. .+..++||||
T Consensus 11 ~~~lg~g~~~~v~~~~~~~~------~~valK~~~~~~~~--~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~ 81 (262)
T cd05071 11 EVKLGQGCFGEVWMGTWNGT------TRVAIKTLKPGTMS--PEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEY 81 (262)
T ss_pred eeecCCCCCCcEEEEEecCC------ceEEEEecccCccC--HHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEc
Confidence 45799999999999988665 57999999864332 267999999999999999999999874 4668999999
Q ss_pred ccCCcHHHHHhc---------------------------c--cccccCCCCccccccCeEEecCCCccc-----------
Q 007935 427 IRNGSLYAALHG---------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI----------- 466 (584)
Q Consensus 427 ~~~GsL~~~L~~---------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~----------- 466 (584)
+++|+|.++++. . .|+++.+.|+.+..+...+..+++...
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~ 161 (262)
T cd05071 82 MSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 161 (262)
T ss_pred CCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeecccccccccc
Confidence 999999877753 1 356677777766666666666665322
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEI 544 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~ 544 (584)
..++..|+|||+... ..++.++|||||||++|||+| |+.||..... ........... ... ..+
T Consensus 162 ~~~~~~~y~~PE~~~~-~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~-----~~~~~~~~~~~-~~~--~~~------ 226 (262)
T cd05071 162 GAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-----REVLDQVERGY-RMP--CPP------ 226 (262)
T ss_pred CCcccceecCHhHhcc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCh-----HHHHHHHhcCC-CCC--Ccc------
Confidence 134557999998544 678999999999999999999 8888864321 11222211111 100 011
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhh
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 581 (584)
.....+.+++.+|++.+|++||++.++.+.|+..
T Consensus 227 ---~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 227 ---ECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred ---ccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 1123456788999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.4e-26 Score=231.10 Aligned_cols=223 Identities=19% Similarity=0.290 Sum_probs=155.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||++.....+ ..+|+|.+.........+++.+|++++.+++||||++++++|.+++..++||||
T Consensus 6 ~~~lg~G~~g~v~~~~~~~~~-----~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 6 LGELGAGNGGVVTKVLHRPSG-----LIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred EeeccCCCCeEEEEEEEcCCC-----eEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 457999999999999987765 789999987653333446789999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc----------------------------ccccccCCCCccccccCeEEecCCCcc---------cccC
Q 007935 427 IRNGSLYAALHG----------------------------FGLNRLLPGTSKVTKNETIVTSGTGSR---------ISAI 469 (584)
Q Consensus 427 ~~~GsL~~~L~~----------------------------~g~~~~~~~~~~i~~~~~~~~~~~~~~---------~~~g 469 (584)
+++|+|.++++. .-|+++.+.|+.+..+...+..+++.. ...|
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 160 (308)
T cd06615 81 MDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG 160 (308)
T ss_pred cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCcccccccccccCCC
Confidence 999999777642 124556666666666666666666532 2357
Q ss_pred CCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC--------CccccChh--
Q 007935 470 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP--------LSEVIDPA-- 539 (584)
Q Consensus 470 t~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~--------~~~~~d~~-- 539 (584)
+..|+|||++ .+..++.++|||||||++|||+||+.||..... .....+.......... ....-++.
T Consensus 161 ~~~~~aPE~~-~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (308)
T cd06615 161 TRSYMSPERL-QGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDA--KELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPM 237 (308)
T ss_pred CcCccChhHh-cCCCCCccchHHHHHHHHHHHHhCCCCCCCcch--hhHHHhhcCccccccccCCcccccCCCCCccchh
Confidence 8899999985 456789999999999999999999999864321 1111111100000000 00000000
Q ss_pred ----hhhhh--------hHHHHHHHHHHHHhcccCCCCCCCCChHHHHHH
Q 007935 540 ----LVKEI--------HAKRQVLATFHIALNCTELDPEFRPRMRTVSES 577 (584)
Q Consensus 540 ----~~~~~--------~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 577 (584)
..... ........+.+++.+||+.+|++|||+.||++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 238 AIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred hHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000 000012346789999999999999999999864
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.6e-26 Score=236.01 Aligned_cols=159 Identities=21% Similarity=0.309 Sum_probs=127.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC-CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCC------c
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARVQHPNIVRLKAFYYAND------E 419 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~------~ 419 (584)
.+.||+|+||.||++.....+ ..||||++... ......+.+.+|+.+++.++||||+++++++...+ .
T Consensus 26 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 100 (359)
T cd07876 26 LKPIGSGAQGIVCAAFDTVLG-----INVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQD 100 (359)
T ss_pred EEEeecCCCEEEEEEEEcCCC-----ceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccce
Confidence 468999999999999987765 89999999754 22233467889999999999999999999987543 4
Q ss_pred eeEeeecccCCcH----------------------HHHHhccc--ccccCCCCccccccCeEEecCCCccc---------
Q 007935 420 KLLISDFIRNGSL----------------------YAALHGFG--LNRLLPGTSKVTKNETIVTSGTGSRI--------- 466 (584)
Q Consensus 420 ~~lV~Ey~~~GsL----------------------~~~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~--------- 466 (584)
.++||||++++.+ ..|||+.| |+++++.|+.+..++.++..++|...
T Consensus 101 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~ 180 (359)
T cd07876 101 VYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMT 180 (359)
T ss_pred eEEEEeCCCcCHHHHHhccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCccccccCccCC
Confidence 7999999986432 13455544 67788888888878888887876432
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCC
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGP 511 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~ 511 (584)
..||..|+|||++. +..++.++|||||||++|||+||+.||.+.
T Consensus 181 ~~~~t~~y~aPE~~~-~~~~~~~~DiwSlG~il~el~tg~~pf~~~ 225 (359)
T cd07876 181 PYVVTRYYRAPEVIL-GMGYKENVDIWSVGCIMGELVKGSVIFQGT 225 (359)
T ss_pred CCcccCCCCCchhcc-CCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 35788999999954 468999999999999999999999999753
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-26 Score=253.55 Aligned_cols=208 Identities=16% Similarity=0.224 Sum_probs=150.4
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC--CceeEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN--DEKLLI 423 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~--~~~~lV 423 (584)
...||+|+||+||+++....+ ..||+|.+.... .....+.|.+|+.++++++|||||+++++|.+. +..|||
T Consensus 18 l~kLG~GgFGtVYLAkdk~tg-----~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyIV 92 (1021)
T PTZ00266 18 IKKIGNGRFGEVFLVKHKRTQ-----EFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYIL 92 (1021)
T ss_pred EEEEecCCCeEEEEEEECCCC-----eEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEEE
Confidence 357999999999999988765 799999987542 233347799999999999999999999988653 468999
Q ss_pred eecccCCcHHHHH-----------------------------hc---------ccccccCCCCcccccc-----------
Q 007935 424 SDFIRNGSLYAAL-----------------------------HG---------FGLNRLLPGTSKVTKN----------- 454 (584)
Q Consensus 424 ~Ey~~~GsL~~~L-----------------------------~~---------~g~~~~~~~~~~i~~~----------- 454 (584)
|||+++|+|.++| |. .-|+++++.|+.+..+
T Consensus 93 MEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~ 172 (1021)
T PTZ00266 93 MEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQA 172 (1021)
T ss_pred EeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccc
Confidence 9999999996554 33 2356666666655321
Q ss_pred ------CeEEecCCCcc----------cccCCCcccCcccccc-CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCc
Q 007935 455 ------ETIVTSGTGSR----------ISAISNVYLAPEARIY-GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKG 517 (584)
Q Consensus 455 ------~~~~~~~~~~~----------~~~gt~~y~aPE~~~~-~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~ 517 (584)
..++..+||.. ...||+.|+|||++.. ...++.++|||||||++|||+||+.||... ..
T Consensus 173 ~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~----~~ 248 (1021)
T PTZ00266 173 NNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKA----NN 248 (1021)
T ss_pred cccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcC----Cc
Confidence 12455666532 2368999999998643 245889999999999999999999999742 22
Q ss_pred HHHHHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 518 LESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 518 l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
...++..............++ .+.+|+..||+.+|.+||++.|++.
T Consensus 249 ~~qli~~lk~~p~lpi~~~S~-------------eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 249 FSQLISELKRGPDLPIKGKSK-------------ELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred HHHHHHHHhcCCCCCcCCCCH-------------HHHHHHHHHhcCChhHCcCHHHHhc
Confidence 333333222211110111222 3456778899999999999999983
|
|
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=4e-26 Score=225.02 Aligned_cols=217 Identities=21% Similarity=0.324 Sum_probs=157.0
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
..+.||+|+||.||+|...+.. .....||||...........+.|.+|+.++++++||||+++++++.+ +..++|||
T Consensus 10 ~~~~lg~g~~g~v~~~~~~~~~--~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv~e 86 (270)
T cd05056 10 LGRCIGEGQFGDVYQGVYMSPE--NEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIVME 86 (270)
T ss_pred eeeeeCCccceeEEEEEEecCC--CCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEEEE
Confidence 3468999999999999876542 11257999998765434445789999999999999999999998865 56789999
Q ss_pred cccCCcHHHHHhc--------------------------cc--ccccCCCCccccccCeEEecCCCccc-----------
Q 007935 426 FIRNGSLYAALHG--------------------------FG--LNRLLPGTSKVTKNETIVTSGTGSRI----------- 466 (584)
Q Consensus 426 y~~~GsL~~~L~~--------------------------~g--~~~~~~~~~~i~~~~~~~~~~~~~~~----------- 466 (584)
|+++|+|.+++.. .| |.++.+.|+.+..+..++..+++...
T Consensus 87 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~ 166 (270)
T cd05056 87 LAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKAS 166 (270)
T ss_pred cCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeecccccceecC
Confidence 9999999877642 22 56666677766666666666655321
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhc-CCCCccccChhhhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRE-RRPLSEVIDPALVKE 543 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~d~~~~~~ 543 (584)
..++..|+|||.+. +..++.++|||||||++||+++ |..||...... +........ ..+.+...++
T Consensus 167 ~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~-----~~~~~~~~~~~~~~~~~~~~----- 235 (270)
T cd05056 167 KGKLPIKWMAPESIN-FRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNN-----DVIGRIENGERLPMPPNCPP----- 235 (270)
T ss_pred CCCccccccChhhhc-cCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHH-----HHHHHHHcCCcCCCCCCCCH-----
Confidence 12345799999854 4678999999999999999996 99999753221 111111111 1112222222
Q ss_pred hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhcC
Q 007935 544 IHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKLQ 584 (584)
Q Consensus 544 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~ 584 (584)
.+.+++.+|+..+|++|||+.++++.|++++.+
T Consensus 236 --------~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 236 --------TLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred --------HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 345577889999999999999999999998653
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-26 Score=238.18 Aligned_cols=158 Identities=20% Similarity=0.313 Sum_probs=131.1
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||+||++.....+ +.||||+++... .....+.+.+|+.++.+++|||||++++++.+.+..++||
T Consensus 6 ~~~LG~G~~g~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 6 LKVIGRGAFGEVRLVQKKDTG-----HVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred eEEEEeCCCEEEEEEEECCCC-----CEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 467999999999999987765 799999997642 2223467889999999999999999999999999999999
Q ss_pred ecccCCcHHHHHh-------------------------ccc--ccccCCCCccccccCeEEecCCCcc------------
Q 007935 425 DFIRNGSLYAALH-------------------------GFG--LNRLLPGTSKVTKNETIVTSGTGSR------------ 465 (584)
Q Consensus 425 Ey~~~GsL~~~L~-------------------------~~g--~~~~~~~~~~i~~~~~~~~~~~~~~------------ 465 (584)
||+++|+|.++++ +.| |++++++|+.+..++.++..++|..
T Consensus 81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~ 160 (363)
T cd05628 81 EFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFY 160 (363)
T ss_pred cCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCccccccccccccc
Confidence 9999999976653 333 5778888887777777777776632
Q ss_pred ----------------------------------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCC
Q 007935 466 ----------------------------------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAG 510 (584)
Q Consensus 466 ----------------------------------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~ 510 (584)
...||+.|+|||++.. ..++.++|||||||++|||++|+.||.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~-~~~~~~~DvwSlGvil~ell~G~~Pf~~ 238 (363)
T cd05628 161 RNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQ-TGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (363)
T ss_pred ccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcC-CCCCCchhhhhhHHHHHHHHhCCCCCCC
Confidence 1368999999999554 6899999999999999999999999975
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.8e-27 Score=252.70 Aligned_cols=219 Identities=27% Similarity=0.356 Sum_probs=167.9
Q ss_pred cceeceeecCceEEEEEecCCCCC--CCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeE
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGM--GAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLL 422 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~--~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~l 422 (584)
..+.+|+|.||.|++|....-... .....||||.++......+.+.+..|+++|+.+ +|+|||.++|+|.+.+..++
T Consensus 300 ~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~ 379 (609)
T KOG0200|consen 300 LGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYV 379 (609)
T ss_pred ccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEE
Confidence 445999999999999987643322 235899999999876556678999999999999 79999999999999999999
Q ss_pred eeecccCCcHHHHHhccc-------------------------------------------ccccCCCCccccccCeEEe
Q 007935 423 ISDFIRNGSLYAALHGFG-------------------------------------------LNRLLPGTSKVTKNETIVT 459 (584)
Q Consensus 423 V~Ey~~~GsL~~~L~~~g-------------------------------------------~~~~~~~~~~i~~~~~~~~ 459 (584)
|+||++.|+|.+||+... |+|+..+|+.+..+..+++
T Consensus 380 v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~~~kI 459 (609)
T KOG0200|consen 380 IVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKNKVIKI 459 (609)
T ss_pred EEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCCCEEEE
Confidence 999999999999986432 4566667777777777888
Q ss_pred cCCCcccc---------c---C--CCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHH
Q 007935 460 SGTGSRIS---------A---I--SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRK 524 (584)
Q Consensus 460 ~~~~~~~~---------~---g--t~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~ 524 (584)
.+||.... . | ...|||||.+.. ..|+.|||||||||+|||++| |..||.+.... ..+.++++.
T Consensus 460 aDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~-~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~-~~l~~~l~~ 537 (609)
T KOG0200|consen 460 ADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFD-RVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPT-EELLEFLKE 537 (609)
T ss_pred ccccceeccCCCCceEecCCCCccceeecCHHHhcc-CcccccchhhHHHHHHHHHhhCCCCCCCCCCcH-HHHHHHHhc
Confidence 88875431 1 1 234999999665 799999999999999999999 89999752211 122223333
Q ss_pred HhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhh
Q 007935 525 AFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581 (584)
Q Consensus 525 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 581 (584)
..+...| .. +..+++++|..||+.+|++||++.|+++.++..
T Consensus 538 G~r~~~P--~~-------------c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 538 GNRMEQP--EH-------------CSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred CCCCCCC--CC-------------CCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 3332221 22 233566799999999999999999999998873
|
|
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2e-27 Score=226.19 Aligned_cols=220 Identities=17% Similarity=0.256 Sum_probs=170.4
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC-CceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN-DEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~-~~~~lV~E 425 (584)
..++-+|.||.||+|.+++.......+.|-||.++...++-+...|+.|...+..++|||+.++.|++.++ ...+++|.
T Consensus 289 ~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~y~ 368 (563)
T KOG1024|consen 289 SCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFVLYP 368 (563)
T ss_pred hhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceEEEe
Confidence 46789999999999988877655666789999998877777788999999999999999999999999774 56899999
Q ss_pred cccCCcHHHHHh---------------------------------cc--cccccCCCCccccccCeEEecCCCccc----
Q 007935 426 FIRNGSLYAALH---------------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI---- 466 (584)
Q Consensus 426 y~~~GsL~~~L~---------------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~---- 466 (584)
++.-|+|..||. .+ .|.|+.++|..|.+.-.++..|...+.
T Consensus 369 ~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP 448 (563)
T KOG1024|consen 369 ATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLTDSALSRDLFP 448 (563)
T ss_pred ccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEeccchhccccCc
Confidence 999999977764 22 346666677777666555554433221
Q ss_pred ---------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCCCcccc
Q 007935 467 ---------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVI 536 (584)
Q Consensus 467 ---------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 536 (584)
..-...||+||.+.. ..|+.++|||||||+||||+| |+.||.+.+.. .+..+.+..++-.+|
T Consensus 449 ~DYhcLGDnEnRPvkWMslEal~n-~~yssasDvWsfGVllWELmtlg~~PyaeIDPf--Em~~ylkdGyRlaQP----- 520 (563)
T KOG1024|consen 449 GDYHCLGDNENRPVKWMSLEALQN-SHYSSASDVWSFGVLLWELMTLGKLPYAEIDPF--EMEHYLKDGYRLAQP----- 520 (563)
T ss_pred ccccccCCCCCCcccccCHHHHhh-hhhcchhhhHHHHHHHHHHHhcCCCCccccCHH--HHHHHHhccceecCC-----
Confidence 112345999999665 799999999999999999999 99999754332 244555555444433
Q ss_pred ChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhcC
Q 007935 537 DPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKLQ 584 (584)
Q Consensus 537 d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~ 584 (584)
-.|..+++.+|.-||+..|++||+++|++.-|.++..|
T Consensus 521 ----------~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~q 558 (563)
T KOG1024|consen 521 ----------FNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQ 558 (563)
T ss_pred ----------CCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHH
Confidence 12445677899999999999999999999999988654
|
|
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.8e-27 Score=242.99 Aligned_cols=159 Identities=21% Similarity=0.317 Sum_probs=131.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+++....+ +.||||.+.... .....+.+.+|++++++++|||||++++.+.+++..++||
T Consensus 6 ~~~lG~G~~g~V~~a~~~~~~-----~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 6 IKTIGIGAFGEVCLVRKVDTN-----ALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred EEEEEeCCCeEEEEEEECCCC-----CEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 357999999999999987765 899999997532 1223467889999999999999999999999999999999
Q ss_pred ecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCcc------------
Q 007935 425 DFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR------------ 465 (584)
Q Consensus 425 Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~------------ 465 (584)
||+++|+|.+++. .. .|++++++|+.+..++.++..++|..
T Consensus 81 E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~ 160 (376)
T cd05598 81 DYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY 160 (376)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccccccc
Confidence 9999999976653 22 36778888877777777777776632
Q ss_pred ------------------------------------------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh
Q 007935 466 ------------------------------------------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT 503 (584)
Q Consensus 466 ------------------------------------------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt 503 (584)
...||+.|||||++. +..++.++|||||||++|||+|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlGvilyell~ 239 (376)
T cd05598 161 QKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLL-RTGYTQLCDWWSVGVILYEMLV 239 (376)
T ss_pred ccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHc-CCCCCcceeeeeccceeeehhh
Confidence 135899999999954 4688999999999999999999
Q ss_pred CCCCCCCC
Q 007935 504 GRLPDAGP 511 (584)
Q Consensus 504 G~~p~~~~ 511 (584)
|+.||.+.
T Consensus 240 G~~Pf~~~ 247 (376)
T cd05598 240 GQPPFLAD 247 (376)
T ss_pred CCCCCCCC
Confidence 99999753
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.4e-26 Score=226.45 Aligned_cols=207 Identities=17% Similarity=0.295 Sum_probs=154.9
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeecc
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 427 (584)
+.||+|+||.||+|.....+ ..||+|.+.........+.|.+|++++++++||||+++++++.+++..++||||+
T Consensus 10 ~~lg~g~~~~vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 10 ERIGKGSFGEVFKGIDNRTQ-----QVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hhcccCCCeEEEEEEEccCC-----EEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence 46999999999999987655 8999999876544444578999999999999999999999999999999999999
Q ss_pred cCCcHHHHHhc------------------------c--cccccCCCCccccccCeEEecCCCcc-----------cccCC
Q 007935 428 RNGSLYAALHG------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSR-----------ISAIS 470 (584)
Q Consensus 428 ~~GsL~~~L~~------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~~gt 470 (584)
++|+|.+++.. . -|.++.+.|+.+..+...+..+++.. ...++
T Consensus 85 ~~~~L~~~i~~~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 164 (277)
T cd06640 85 GGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGT 164 (277)
T ss_pred CCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCccccccccCc
Confidence 99999776642 2 34566667766666666666666532 12467
Q ss_pred CcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHHHH
Q 007935 471 NVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQV 550 (584)
Q Consensus 471 ~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 550 (584)
..|+|||++.. ..++.++|||||||++|||+||+.||...... .......... ...+. ....
T Consensus 165 ~~y~apE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-----~~~~~~~~~~---~~~~~---------~~~~ 226 (277)
T cd06640 165 PFWMAPEVIQQ-SAYDSKADIWSLGITAIELAKGEPPNSDMHPM-----RVLFLIPKNN---PPTLT---------GEFS 226 (277)
T ss_pred ccccCHhHhcc-CCCccHHHHHHHHHHHHHHHHCCCCCCCcChH-----hHhhhhhcCC---CCCCc---------hhhh
Confidence 78999998554 67899999999999999999999998753221 1111111111 11111 1123
Q ss_pred HHHHHHHhcccCCCCCCCCChHHHHHH
Q 007935 551 LATFHIALNCTELDPEFRPRMRTVSES 577 (584)
Q Consensus 551 ~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 577 (584)
..+.+++.+||+.+|++||++.++++.
T Consensus 227 ~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 227 KPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred HHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 356678889999999999999999753
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.6e-26 Score=222.81 Aligned_cols=211 Identities=22% Similarity=0.328 Sum_probs=156.2
Q ss_pred eceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeeccc
Q 007935 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIR 428 (584)
Q Consensus 349 ~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~ 428 (584)
.||+|++|.||+|.+...+ +....||||.+.........++|.+|+.++++++|||||++++++.+ ...++||||++
T Consensus 2 ~ig~g~~~~v~~~~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~ 78 (257)
T cd05040 2 KLGDGSFGVVRRGEWSTSG--GKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAP 78 (257)
T ss_pred cCCccCcccEEeeeEecCC--CCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecC
Confidence 6899999999999986632 11257999999876443455889999999999999999999999988 88999999999
Q ss_pred CCcHHHHHhc---------------------------c--cccccCCCCccccccCeEEecCCCccc-------------
Q 007935 429 NGSLYAALHG---------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI------------- 466 (584)
Q Consensus 429 ~GsL~~~L~~---------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~------------- 466 (584)
+|+|.+++.+ . -|+++.+.|+.+..+..++..+++...
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 158 (257)
T cd05040 79 LGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEE 158 (257)
T ss_pred CCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccceeccc
Confidence 9999877643 1 356667777777666777777765322
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEI 544 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~ 544 (584)
..++..|+|||++. +..++.++|||||||++|||+| |+.||.... ..+............. .+.
T Consensus 159 ~~~~~~~y~~pE~~~-~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~-----~~~~~~~~~~~~~~~~---~~~----- 224 (257)
T cd05040 159 HLKVPFAWCAPESLR-TRTFSHASDVWMFGVTLWEMFTYGEEPWAGLS-----GSQILKKIDKEGERLE---RPE----- 224 (257)
T ss_pred CCCCCceecCHHHhc-ccCcCchhhhHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHhcCCcCC---CCc-----
Confidence 23567899999854 4678999999999999999999 999986421 2222222221111110 000
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHH
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~ 579 (584)
.....+.+++.+||+.+|++|||+.|+++.|.
T Consensus 225 ---~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 225 ---ACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred ---cCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 01124566888899999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.3e-26 Score=237.91 Aligned_cols=216 Identities=15% Similarity=0.175 Sum_probs=152.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||++....++ +.||+|.... +.+.+|++++++++|||||++++++..++..++|+||
T Consensus 97 ~~~lg~G~~g~V~~~~d~~~~-----~~vaiK~~~~-------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 97 LETFTPGAEGFAFACIDNKTC-----EHVVIKAGQR-------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR 164 (391)
T ss_pred EEEEcCCCCeEEEEEEECCCC-----CEEEEechhh-------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence 467999999999999988776 7999996542 4578999999999999999999999999999999999
Q ss_pred ccCCcHHHHH-------------------------hccc--ccccCCCCccccccCeEEecCCCccc------------c
Q 007935 427 IRNGSLYAAL-------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSRI------------S 467 (584)
Q Consensus 427 ~~~GsL~~~L-------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~------------~ 467 (584)
+. ++|..++ |..| |+++++.|+.+..++.++..++|... .
T Consensus 165 ~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~~ 243 (391)
T PHA03212 165 YK-TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGW 243 (391)
T ss_pred CC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCcccccccccccccccc
Confidence 96 5775443 4433 67888888888777777777776431 2
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCC------CcHHHHHHHHhhcCCCCccccChhhh
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDG------KGLESLVRKAFRERRPLSEVIDPALV 541 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~------~~l~~~~~~~~~~~~~~~~~~d~~~~ 541 (584)
.||+.|+|||++.. ..++.++|||||||++|||+||+.||....... ..+.......-.....++......+.
T Consensus 244 ~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~ 322 (391)
T PHA03212 244 AGTIATNAPELLAR-DPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLD 322 (391)
T ss_pred cCccCCCChhhhcC-CCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHH
Confidence 58999999999554 689999999999999999999998875432111 01111111100000000000000000
Q ss_pred h-----------------h-hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 542 K-----------------E-IHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 542 ~-----------------~-~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
. . ........++.+++.+||+.||++|||+.|+++
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 323 EIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred HHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0 0 000112346778999999999999999999984
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.2e-27 Score=218.95 Aligned_cols=222 Identities=17% Similarity=0.214 Sum_probs=159.7
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcch-hhHhHHHHHHHHHhcCCCceeeeeEEEEe--CCceeEee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATW-RFKDFESEVEAIARVQHPNIVRLKAFYYA--NDEKLLIS 424 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~-~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~--~~~~~lV~ 424 (584)
+.|++|+||.||+|+...++ ..||+|+++-..... .--.-+|||.+|.+++|||||.+..+... -+.+|+||
T Consensus 82 nrI~EGtyGiVYRakdk~t~-----eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VM 156 (419)
T KOG0663|consen 82 NRIEEGTYGVVYRAKDKKTD-----EIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVM 156 (419)
T ss_pred hhcccCcceeEEEeccCCcc-----eeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeH
Confidence 56999999999999999887 899999998763221 11345899999999999999999988764 45799999
Q ss_pred ecccCCcHH--------------------------HHHhcc--cccccCCCCccccccCeEEecCCCccccc--------
Q 007935 425 DFIRNGSLY--------------------------AALHGF--GLNRLLPGTSKVTKNETIVTSGTGSRISA-------- 468 (584)
Q Consensus 425 Ey~~~GsL~--------------------------~~L~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~~~-------- 468 (584)
|||+. ||. .|||+. -|+|++..|..+...+.+++.|||.....
T Consensus 157 e~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~~T 235 (419)
T KOG0663|consen 157 EYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLKPYT 235 (419)
T ss_pred HHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCCcccCc
Confidence 99987 764 344443 47889999988888899999999866543
Q ss_pred ---CCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHH-hhcCCCCccccChhhh---
Q 007935 469 ---ISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKA-FRERRPLSEVIDPALV--- 541 (584)
Q Consensus 469 ---gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~d~~~~--- 541 (584)
-|.+|.|||.++....|+++.|+||+|||+.||+++++-|.+...- ..+..+++.. .+.+.-++........
T Consensus 236 ~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~-dQl~~If~llGtPte~iwpg~~~lp~~k~~ 314 (419)
T KOG0663|consen 236 PLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEI-DQLDKIFKLLGTPSEAIWPGYSELPAVKKM 314 (419)
T ss_pred ceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchH-HHHHHHHHHhCCCccccCCCccccchhhcc
Confidence 4668999999888788999999999999999999999888763221 1122222111 1111111111111111
Q ss_pred -----------hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 542 -----------KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 542 -----------~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
..+....-...-+++....+..||.+|.|+.|.++
T Consensus 315 ~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 315 TFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred ccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence 00000001145577888899999999999999874
|
|
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=2e-26 Score=228.88 Aligned_cols=214 Identities=21% Similarity=0.274 Sum_probs=156.7
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeecc
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 427 (584)
+.||+|+||+||++....++ +.||+|.+.........+.|.+|+++++.++||||+++++++...+..++||||+
T Consensus 11 ~~ig~g~~g~v~~~~~~~~~-----~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (284)
T cd06620 11 SDLGAGNGGSVSKVKHIPTG-----TVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFM 85 (284)
T ss_pred HHcCCCCCeEEEEEEEcCCC-----cEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEecC
Confidence 57999999999999987665 7899999876544444578999999999999999999999999999999999999
Q ss_pred cCCcHHHHHhc----------------------------ccccccCCCCccccccCeEEecCCCcc---------cccCC
Q 007935 428 RNGSLYAALHG----------------------------FGLNRLLPGTSKVTKNETIVTSGTGSR---------ISAIS 470 (584)
Q Consensus 428 ~~GsL~~~L~~----------------------------~g~~~~~~~~~~i~~~~~~~~~~~~~~---------~~~gt 470 (584)
++|+|.++++. .-|+++.+.|+.+..+...+..+++.. ...|+
T Consensus 86 ~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~~~~~~~ 165 (284)
T cd06620 86 DCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADTFVGT 165 (284)
T ss_pred CCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhccCccccC
Confidence 99999765543 123445555555555556666666532 23578
Q ss_pred CcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCC------CcHHHHHHHHhhcCCCCccccChhhhhhh
Q 007935 471 NVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDG------KGLESLVRKAFRERRPLSEVIDPALVKEI 544 (584)
Q Consensus 471 ~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~------~~l~~~~~~~~~~~~~~~~~~d~~~~~~~ 544 (584)
..|+|||++.. ..++.++|||||||++||++||+.||....... ..+..+.........+ .. ..
T Consensus 166 ~~~~aPE~~~~-~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~------ 235 (284)
T cd06620 166 STYMSPERIQG-GKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPP--RL-PS------ 235 (284)
T ss_pred cccCCHHHHcc-CCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCC--CC-Cc------
Confidence 89999998654 578999999999999999999999997543211 1122233333222111 00 00
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHH
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 578 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L 578 (584)
......+.+++.+||+.||++|||+.|++++.
T Consensus 236 --~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 236 --SDFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred --hhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 01123456788889999999999999999753
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=3e-26 Score=228.94 Aligned_cols=205 Identities=18% Similarity=0.269 Sum_probs=153.7
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeecc
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 427 (584)
+.||+|+||.||+|.....+ +.||+|.+...... ..+.+.+|+.++++++||||+++++++..++..++||||+
T Consensus 26 ~~lg~g~~~~v~~~~~~~~~-----~~v~ik~~~~~~~~-~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~ 99 (296)
T cd06654 26 EKIGQGASGTVYTAMDVATG-----QEVAIRQMNLQQQP-KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (296)
T ss_pred EEecCCCCeEEEEEEECCCC-----cEEEEEEEecCCcc-hHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence 56999999999999976654 78999999765333 2377899999999999999999999999999999999999
Q ss_pred cCCcHHHHHh------------------------ccc--ccccCCCCccccccCeEEecCCCcc-----------cccCC
Q 007935 428 RNGSLYAALH------------------------GFG--LNRLLPGTSKVTKNETIVTSGTGSR-----------ISAIS 470 (584)
Q Consensus 428 ~~GsL~~~L~------------------------~~g--~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~~gt 470 (584)
++|+|.++++ +.| |+++.+.|+.+..+...+..+++.. ...++
T Consensus 100 ~~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 179 (296)
T cd06654 100 AGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGT 179 (296)
T ss_pred CCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhccccccccCcccCC
Confidence 9999976654 223 5666667777766677777776532 13677
Q ss_pred CcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCC--ccccChhhhhhhhHHH
Q 007935 471 NVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPL--SEVIDPALVKEIHAKR 548 (584)
Q Consensus 471 ~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~d~~~~~~~~~~~ 548 (584)
..|+|||.+.. ..++.++|||||||++|||++|+.||...... ..+........... +..++
T Consensus 180 ~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~~----------- 243 (296)
T cd06654 180 PYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL----RALYLIATNGTPELQNPEKLS----------- 243 (296)
T ss_pred ccccCHHHHcC-CCCCccchHHHHHHHHHHHHhCCCCCCCCCHH----HhHHHHhcCCCCCCCCccccC-----------
Confidence 88999998554 67889999999999999999999999753221 11111111111110 11111
Q ss_pred HHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 549 QVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 549 ~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
..+.+++.+||..+|++|||+.|+++
T Consensus 244 --~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 244 --AIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred --HHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 23456788899999999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.6e-27 Score=223.67 Aligned_cols=218 Identities=20% Similarity=0.318 Sum_probs=157.2
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCc-----e
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDE-----K 420 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~-----~ 420 (584)
..+++|.|+||.||+|.....+ ..||||+....... --+|+++|++++|||||+|+-+|....+ .
T Consensus 28 ~~~liG~GsFg~Vyq~~~~e~~-----~~vAIKKv~~d~r~-----knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~l 97 (364)
T KOG0658|consen 28 AVRLIGSGSFGVVYQAKLRETE-----EEVAIKKVLQDKRY-----KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYL 97 (364)
T ss_pred eeEEEeecccceEEEEEEcCCC-----ceeEEEEecCCCCc-----CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHH
Confidence 3578999999999999998875 89999998764322 2479999999999999999999876432 3
Q ss_pred eEeeecccCCcHHHHHh-----------------------------cc--cccccCCCCcccccc-CeEEecCCCcccc-
Q 007935 421 LLISDFIRNGSLYAALH-----------------------------GF--GLNRLLPGTSKVTKN-ETIVTSGTGSRIS- 467 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~~L~-----------------------------~~--g~~~~~~~~~~i~~~-~~~~~~~~~~~~~- 467 (584)
.+||||||. +|+++++ .. .|+|+++.|..++.+ +..+..|||++..
T Consensus 98 nlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L 176 (364)
T KOG0658|consen 98 NLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVL 176 (364)
T ss_pred HHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceee
Confidence 589999997 8866654 22 468899999888776 7778899987542
Q ss_pred ---------cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcC--C------
Q 007935 468 ---------AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER--R------ 530 (584)
Q Consensus 468 ---------~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~--~------ 530 (584)
.-|..|.|||.+.....|+.+.||||.|||+.||+-|++-|.+.+.. ..+..+++ .+.-. .
T Consensus 177 ~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~-dQL~eIik-~lG~Pt~e~I~~mn 254 (364)
T KOG0658|consen 177 VKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSV-DQLVEIIK-VLGTPTREDIKSMN 254 (364)
T ss_pred ccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHH-HHHHHHHH-HhCCCCHHHHhhcC
Confidence 34677999999887789999999999999999999999999863321 12222221 11110 0
Q ss_pred -CCccccChhhhhhh----hHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 531 -PLSEVIDPALVKEI----HAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 531 -~~~~~~d~~~~~~~----~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
...+.-.|.+.... .......+.++++.+++..+|.+|.++.|+++
T Consensus 255 ~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 255 PNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred cccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 00011111111110 11123346788999999999999999999974
|
|
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.2e-26 Score=224.33 Aligned_cols=217 Identities=23% Similarity=0.368 Sum_probs=158.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||+||+|++...+.. ....||+|.++........+++.+|+.+++.++||||+++++++.. ...+++|||
T Consensus 12 ~~~lg~G~~g~vy~~~~~~~~~~-~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l~~~~ 89 (279)
T cd05109 12 VKVLGSGAFGTVYKGIWIPDGEN-VKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQLVTQL 89 (279)
T ss_pred eeecCCCCCceEEEEEEecCCCc-cceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEEEEEc
Confidence 36799999999999987654321 1246899999865444445789999999999999999999999975 457899999
Q ss_pred ccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc------------
Q 007935 427 IRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI------------ 466 (584)
Q Consensus 427 ~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~------------ 466 (584)
+++|+|.++++. . -|+++.++|+.+..++.++..++|...
T Consensus 90 ~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~~~~~ 169 (279)
T cd05109 90 MPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHAD 169 (279)
T ss_pred CCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeecccccceeecC
Confidence 999999877643 2 357788888777777777777776432
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEI 544 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~ 544 (584)
..++..|+|||.... ..++.++|||||||++|||+| |..||..... ..+..++... ...+.+...+
T Consensus 170 ~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~~~~~~~~~--~~~~~~~~~~------- 237 (279)
T cd05109 170 GGKVPIKWMALESILH-RRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA--REIPDLLEKG--ERLPQPPICT------- 237 (279)
T ss_pred CCccchhhCCHHHhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHHCC--CcCCCCccCC-------
Confidence 123557999998544 678999999999999999999 8999864221 1122222111 1111111112
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
..+.+++.+||+.||++||++.+++..|+++..
T Consensus 238 ------~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05109 238 ------IDVYMIMVKCWMIDSECRPRFRELVDEFSRMAR 270 (279)
T ss_pred ------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 234567888999999999999999999988753
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.5e-26 Score=222.19 Aligned_cols=206 Identities=25% Similarity=0.391 Sum_probs=151.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|....+ ..||+|.++..... .+.|.+|+.++++++|+||+++++++. .+..++||||
T Consensus 11 ~~~ig~g~~~~v~~~~~~~~------~~~~~k~~~~~~~~--~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~ 81 (260)
T cd05070 11 IKKLGNGQFGEVWMGTWNGN------TKVAVKTLKPGTMS--PESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEY 81 (260)
T ss_pred hheeccccCceEEEEEecCC------ceeEEEEecCCCCC--HHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEe
Confidence 45799999999999987765 67999999764332 367999999999999999999999874 5678999999
Q ss_pred ccCCcHHHHHhc---------------------------c--cccccCCCCccccccCeEEecCCCccc-----------
Q 007935 427 IRNGSLYAALHG---------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI----------- 466 (584)
Q Consensus 427 ~~~GsL~~~L~~---------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~----------- 466 (584)
+++|+|.+++++ . -|+++.+.|..+..+...+..+++...
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~ 161 (260)
T cd05070 82 MSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQ 161 (260)
T ss_pred cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCccccccc
Confidence 999999877643 2 245666667666665556666654321
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhc-CCCCccccChhhhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRE-RRPLSEVIDPALVKE 543 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~d~~~~~~ 543 (584)
..++..|+|||+.. +..++.++||||||+++|||++ |+.||.+.. ..+........ ..+.+...+
T Consensus 162 ~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~------ 229 (260)
T cd05070 162 GAKFPIKWTAPEAAL-YGRFTIKSDVWSFGILLTELVTKGRVPYPGMN-----NREVLEQVERGYRMPCPQDCP------ 229 (260)
T ss_pred CCCCCccccChHHHh-cCCCcchhhhHHHHHHHHHHHhcCCCCCCCCC-----HHHHHHHHHcCCCCCCCCcCC------
Confidence 12345799999854 4678999999999999999999 889986422 12222222211 111111111
Q ss_pred hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHh
Q 007935 544 IHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580 (584)
Q Consensus 544 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 580 (584)
..+.+++.+|++.+|++|||++++.+.|++
T Consensus 230 -------~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 230 -------ISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred -------HHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 245668888999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.7e-26 Score=221.91 Aligned_cols=207 Identities=27% Similarity=0.391 Sum_probs=154.5
Q ss_pred eceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeeccc
Q 007935 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIR 428 (584)
Q Consensus 349 ~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~ 428 (584)
.||+|+||.||++...++ +.||+|.++........+.|.+|++++++++||||+++++++.+.+..++||||++
T Consensus 2 ~lg~g~~g~v~~~~~~~~------~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 75 (251)
T cd05041 2 KIGKGNFGDVYKGVLKGN------TEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVP 75 (251)
T ss_pred ccccCCCceEEEEEEeCC------CcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCC
Confidence 689999999999998774 79999998875444445789999999999999999999999999999999999999
Q ss_pred CCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc-------------c
Q 007935 429 NGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI-------------S 467 (584)
Q Consensus 429 ~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~-------------~ 467 (584)
+++|.++++. . -|+++.+.|+.+..++.+...+++... .
T Consensus 76 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~ 155 (251)
T cd05041 76 GGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLK 155 (251)
T ss_pred CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccC
Confidence 9999877643 1 246666677766666666666655322 1
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhc-CCCCccccChhhhhhhh
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRE-RRPLSEVIDPALVKEIH 545 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~d~~~~~~~~ 545 (584)
.++..|+|||.+.. ..++.++|||||||++|||+| |..||..... .......... ..+.++..
T Consensus 156 ~~~~~y~~PE~~~~-~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~--------- 220 (251)
T cd05041 156 QIPIKWTAPEALNY-GRYTSESDVWSYGILLWETFSLGDTPYPGMSN-----QQTRERIESGYRMPAPQLC--------- 220 (251)
T ss_pred cceeccCChHhhcc-CCCCcchhHHHHHHHHHHHHhccCCCCccCCH-----HHHHHHHhcCCCCCCCccC---------
Confidence 22446999998554 678999999999999999999 8888864321 1111111111 11111111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHh
Q 007935 546 AKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 580 (584)
...+.+++.+||+.+|++|||+.|+++.|+.
T Consensus 221 ----~~~~~~li~~~l~~~p~~Rp~~~ell~~l~~ 251 (251)
T cd05041 221 ----PEEIYRLMLQCWAYDPENRPSFSEIYNELQI 251 (251)
T ss_pred ----CHHHHHHHHHHhccChhhCcCHHHHHHHhhC
Confidence 1245668888999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.1e-26 Score=231.72 Aligned_cols=220 Identities=14% Similarity=0.204 Sum_probs=154.4
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|+....+ ..||+|.++..........+.+|++++++++||||+++++++..++..++||||
T Consensus 11 ~~~lg~G~~g~Vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 11 LEKLGEGTYATVFKGRSKLTE-----NLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred EEEecccCCEEEEEEEecCCC-----CeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 457999999999999987665 789999997654333346788999999999999999999999999999999999
Q ss_pred ccCCcHHHHH--------------------------hccc--ccccCCCCccccccCeEEecCCCccc-----------c
Q 007935 427 IRNGSLYAAL--------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSRI-----------S 467 (584)
Q Consensus 427 ~~~GsL~~~L--------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~-----------~ 467 (584)
+++ +|.+++ |+.| |+++.+.|+.+..+..++..++|... .
T Consensus 86 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 164 (309)
T cd07872 86 LDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNE 164 (309)
T ss_pred CCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCccccccc
Confidence 985 675544 3333 56677777777766777777776321 2
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC--CccccC--------
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP--LSEVID-------- 537 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~d-------- 537 (584)
.+|..|+|||++.....++.++|||||||++|||+||+.||.+....+ .+.. .......... .+...+
T Consensus 165 ~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (309)
T cd07872 165 VVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVED-ELHL-IFRLLGTPTEETWPGISSNDEFKNYN 242 (309)
T ss_pred cccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHH-HHHHhCCCCHHHHhhhcchhhhhhhh
Confidence 467889999986554578999999999999999999999997532211 1111 1111100000 000000
Q ss_pred ------hhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 538 ------PALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 538 ------~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
...... .......+.+++.+|++.||.+|||+.|+++
T Consensus 243 ~~~~~~~~~~~~--~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 243 FPKYKPQPLINH--APRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred cCccCCCchhhh--ccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 000000 0001234568899999999999999999985
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-26 Score=233.44 Aligned_cols=205 Identities=21% Similarity=0.270 Sum_probs=158.8
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcc--hhhHhHHHHHHHHHhcC-CCceeeeeEEEEeCCceeEee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT--WRFKDFESEVEAIARVQ-HPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~--~~~~~f~~Ei~~l~~l~-HpnIV~l~g~~~~~~~~~lV~ 424 (584)
+.||+|.||.||+++...++ +.+|+|.+.+.... ...+.+.+|+++|+++. |||||.++++|.+.+..++||
T Consensus 41 ~~lG~G~Fg~v~~~~~~~tg-----~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvm 115 (382)
T KOG0032|consen 41 RELGRGQFGVVYLCREKSTG-----KEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVM 115 (382)
T ss_pred hhhCCCCceEEEEEEecCCC-----ceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEE
Confidence 67999999999999999875 89999999876332 23468999999999998 999999999999999999999
Q ss_pred ecccCCcHHHHHhc------------------------c--cccccCCCCcccccc----CeEEecCCCcc---------
Q 007935 425 DFIRNGSLYAALHG------------------------F--GLNRLLPGTSKVTKN----ETIVTSGTGSR--------- 465 (584)
Q Consensus 425 Ey~~~GsL~~~L~~------------------------~--g~~~~~~~~~~i~~~----~~~~~~~~~~~--------- 465 (584)
|++.||.|++.+-. . -|++++++|...... ..++..+||.+
T Consensus 116 EL~~GGeLfd~i~~~~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~~~ 195 (382)
T KOG0032|consen 116 ELCEGGELFDRIVKKHYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGERL 195 (382)
T ss_pred EecCCchHHHHHHHccCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCceE
Confidence 99999999776533 2 367788877765443 25667777643
Q ss_pred -cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC----CccccChhh
Q 007935 466 -ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP----LSEVIDPAL 540 (584)
Q Consensus 466 -~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~----~~~~~d~~~ 540 (584)
..+||+.|+|||++. +..|+.++||||.||++|.|++|.+||.+...... .......... ..+.++..+
T Consensus 196 ~~~~Gtp~y~APEvl~-~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~-----~~~i~~~~~~f~~~~w~~is~~a 269 (382)
T KOG0032|consen 196 HTIVGTPEYVAPEVLG-GRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEI-----FLAILRGDFDFTSEPWDDISESA 269 (382)
T ss_pred eeecCCccccCchhhc-CCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHH-----HHHHHcCCCCCCCCCccccCHHH
Confidence 358999999999954 36899999999999999999999999986443221 1233333222 222233333
Q ss_pred hhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 541 VKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 541 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
-+++..++..||.+|+|+.++++
T Consensus 270 -------------kd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 270 -------------KDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred -------------HHHHHHhcccCcccCCCHHHHhc
Confidence 34666699999999999999986
|
|
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.9e-26 Score=222.46 Aligned_cols=206 Identities=27% Similarity=0.402 Sum_probs=151.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|...++ +.||+|.+...... .++|.+|+.++++++||||+++++++ ..+..++||||
T Consensus 11 ~~~ig~G~~g~v~~~~~~~~------~~~a~K~~~~~~~~--~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v~e~ 81 (260)
T cd05067 11 VKKLGAGQFGEVWMGYYNGH------TKVAIKSLKQGSMS--PEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIITEY 81 (260)
T ss_pred eeeeccCccceEEeeecCCC------ceEEEEEecCCCCc--HHHHHHHHHHHHhcCCcCeeeEEEEE-ccCCcEEEEEc
Confidence 46799999999999997765 78999999865332 36899999999999999999999986 45678999999
Q ss_pred ccCCcHHHHHhc---------------------------cc--ccccCCCCccccccCeEEecCCCccc-----------
Q 007935 427 IRNGSLYAALHG---------------------------FG--LNRLLPGTSKVTKNETIVTSGTGSRI----------- 466 (584)
Q Consensus 427 ~~~GsL~~~L~~---------------------------~g--~~~~~~~~~~i~~~~~~~~~~~~~~~----------- 466 (584)
+++|+|.++++. .| |+++.+.|..+..+......+++...
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~ 161 (260)
T cd05067 82 MENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTARE 161 (260)
T ss_pred CCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCccccc
Confidence 999999776642 22 45566666666666656666654321
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC-CCCccccChhhhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER-RPLSEVIDPALVKE 543 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~d~~~~~~ 543 (584)
..++..|+|||++.. ..++.++|||||||++||+++ |+.||.+... .+......... .+.....+
T Consensus 162 ~~~~~~~y~~pe~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~------ 229 (260)
T cd05067 162 GAKFPIKWTAPEAINY-GTFTIKSDVWSFGILLTEIVTYGRIPYPGMTN-----PEVIQNLERGYRMPRPDNCP------ 229 (260)
T ss_pred CCcccccccCHHHhcc-CCcCcccchHHHHHHHHHHHhCCCCCCCCCCh-----HHHHHHHHcCCCCCCCCCCC------
Confidence 134567999998544 578999999999999999999 9999975321 22222211111 11111111
Q ss_pred hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHh
Q 007935 544 IHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580 (584)
Q Consensus 544 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 580 (584)
.++.+++.+||+.+|++|||++++...|+.
T Consensus 230 -------~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 230 -------EELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred -------HHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 245668888999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-27 Score=213.80 Aligned_cols=216 Identities=18% Similarity=0.261 Sum_probs=161.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCC-----cee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAND-----EKL 421 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~-----~~~ 421 (584)
.+.+|+|||+.||.++...++ ..+|+|++.... .+..+..++|++..++++||||+++++++..+. +.|
T Consensus 26 ~~~LgeGGfsfv~LV~~~s~~-----~~YAlKkI~c~~-~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~y 99 (302)
T KOG2345|consen 26 QRLLGEGGFSFVDLVKGLSTG-----HLYALKKILCHS-QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAY 99 (302)
T ss_pred eeeecCCCceeeeeecccCcc-----cchhhheeeccc-hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEE
Confidence 356999999999999865554 799999998754 445588999999999999999999999876543 499
Q ss_pred EeeecccCCcHHHHHh-----------------------------c----ccccccCCCCccccccCeEEecCCCcccc-
Q 007935 422 LISDFIRNGSLYAALH-----------------------------G----FGLNRLLPGTSKVTKNETIVTSGTGSRIS- 467 (584)
Q Consensus 422 lV~Ey~~~GsL~~~L~-----------------------------~----~g~~~~~~~~~~i~~~~~~~~~~~~~~~~- 467 (584)
|+++|...|+|.+++. + +.|+|+++.|+....+...+..|+|+...
T Consensus 100 ll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a 179 (302)
T KOG2345|consen 100 LLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQA 179 (302)
T ss_pred EEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCcccc
Confidence 9999999999976653 3 24788899888777766667777765321
Q ss_pred -------------------cCCCcccCccccc--cCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHh
Q 007935 468 -------------------AISNVYLAPEARI--YGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF 526 (584)
Q Consensus 468 -------------------~gt~~y~aPE~~~--~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~ 526 (584)
.-|..|.|||.+. .+...++++|||||||+||+|+.|..||+.....+..+.--+
T Consensus 180 ~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv---- 255 (302)
T KOG2345|consen 180 PIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAV---- 255 (302)
T ss_pred ceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEee----
Confidence 3467799999863 235678999999999999999999999986544333322111
Q ss_pred hcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 527 RERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 527 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.++.+.- .......+.+.+++.+|++.||.+||++.+++..++.+.
T Consensus 256 ---------~n~q~s~-P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 256 ---------QNAQISI-PNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred ---------ecccccc-CCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 1111000 000012345677888999999999999999999988764
|
|
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.2e-26 Score=223.83 Aligned_cols=208 Identities=16% Similarity=0.221 Sum_probs=153.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc----chhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeE
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA----TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLL 422 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~----~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~l 422 (584)
.+.||+|++|.||++....++ +.||+|.+..... ....+.+.+|++++++++||||+++++++.+++..++
T Consensus 7 ~~~lg~g~~~~vy~~~~~~~~-----~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 7 GKLLGQGAFGRVYLCYDVDTG-----RELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred cceecCCCceEEEEEEEcCCC-----cEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 467999999999999987655 7899999875421 2234678999999999999999999999999999999
Q ss_pred eeecccCCcHHHHHh-------------------------ccc--ccccCCCCccccccCeEEecCCCcc----------
Q 007935 423 ISDFIRNGSLYAALH-------------------------GFG--LNRLLPGTSKVTKNETIVTSGTGSR---------- 465 (584)
Q Consensus 423 V~Ey~~~GsL~~~L~-------------------------~~g--~~~~~~~~~~i~~~~~~~~~~~~~~---------- 465 (584)
||||+++++|.+++. +.| |+++.+.|+.+..+..++..+++..
T Consensus 82 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~ 161 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSG 161 (263)
T ss_pred EEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecccccccc
Confidence 999999999976553 333 4666667776666666666665532
Q ss_pred ----cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhh-cCCCCccccChhh
Q 007935 466 ----ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR-ERRPLSEVIDPAL 540 (584)
Q Consensus 466 ----~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~d~~~ 540 (584)
...++..|+|||++.. ..++.++|||||||++|||++|+.||.... ........... ....++..+++.
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~g~~p~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~- 235 (263)
T cd06625 162 TGMKSVTGTPYWMSPEVISG-EGYGRKADVWSVGCTVVEMLTEKPPWAEFE----AMAAIFKIATQPTNPQLPSHVSPD- 235 (263)
T ss_pred ccccCCCcCccccCcceecc-CCCCchhhhHHHHHHHHHHHhCCCCccccc----hHHHHHHHhccCCCCCCCccCCHH-
Confidence 1246678999999554 678999999999999999999999987421 11211111111 111222333333
Q ss_pred hhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHH
Q 007935 541 VKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSES 577 (584)
Q Consensus 541 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 577 (584)
+.+++.+||+.+|++|||+.|+++.
T Consensus 236 ------------~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 236 ------------ARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred ------------HHHHHHHHhhcCcccCCCHHHHhhC
Confidence 3457777999999999999999863
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.4e-26 Score=221.87 Aligned_cols=207 Identities=27% Similarity=0.378 Sum_probs=156.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|...++ +.||||.+...... .+++.+|+.++++++||||+++++++.+....++||||
T Consensus 11 ~~~ig~g~~~~v~~~~~~~~------~~~~vK~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 82 (261)
T cd05034 11 ERKLGAGQFGEVWMGTWNGT------TKVAVKTLKPGTMS--PEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEY 82 (261)
T ss_pred eeeeccCcceEEEEEEEcCC------ceEEEEEecCCccC--HHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEec
Confidence 46799999999999997655 68999999864332 37899999999999999999999999998999999999
Q ss_pred ccCCcHHHHHhc---------------------------c--cccccCCCCccccccCeEEecCCCcccc----------
Q 007935 427 IRNGSLYAALHG---------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRIS---------- 467 (584)
Q Consensus 427 ~~~GsL~~~L~~---------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~~---------- 467 (584)
+++|+|.++++. . -|.++.+.|+.+..+..++..+++....
T Consensus 83 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~ 162 (261)
T cd05034 83 MSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTARE 162 (261)
T ss_pred cCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccchhhhhhh
Confidence 999999877643 2 2456667777776666666666653221
Q ss_pred --cCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhc-CCCCccccChhhhhh
Q 007935 468 --AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRE-RRPLSEVIDPALVKE 543 (584)
Q Consensus 468 --~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~d~~~~~~ 543 (584)
.++..|+|||.+. +..++.++|||||||++||++| |+.||.+... .......... ..+.+...+
T Consensus 163 ~~~~~~~y~~PE~~~-~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~------ 230 (261)
T cd05034 163 GAKFPIKWTAPEAAN-YGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN-----REVLEQVERGYRMPRPPNCP------ 230 (261)
T ss_pred ccCCCccccCHHHhc-cCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHHcCCCCCCCCCCC------
Confidence 2345799999854 4678999999999999999999 9999864321 2222222221 111111111
Q ss_pred hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHh
Q 007935 544 IHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580 (584)
Q Consensus 544 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 580 (584)
..+.+++.+|++.+|++||+++++.+.|+.
T Consensus 231 -------~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 231 -------EELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred -------HHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 245668888999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.9e-26 Score=221.42 Aligned_cols=207 Identities=22% Similarity=0.370 Sum_probs=153.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||++....+ ..+|+|.++..... .++|.+|++++++++||||+++++++......++||||
T Consensus 9 ~~~ig~g~~g~v~~~~~~~~------~~~~~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd05112 9 VQEIGSGQFGLVWLGYWLEK------RKVAIKTIREGAMS--EEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEF 80 (256)
T ss_pred EeeecCcccceEEEEEEeCC------CeEEEEECCCCCCC--HHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEc
Confidence 46799999999999988654 68999998764332 26799999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc------------
Q 007935 427 IRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI------------ 466 (584)
Q Consensus 427 ~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~------------ 466 (584)
+++|+|.++++. . -|+++.+.|..+..+...+..+++...
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~ 160 (256)
T cd05112 81 MEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTG 160 (256)
T ss_pred CCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCcccccCC
Confidence 999999777643 1 245666666666666666666665322
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhh
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIH 545 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~ 545 (584)
..++..|+|||++.. ..++.++|||||||++|||++ |+.||.... .............. ..+..
T Consensus 161 ~~~~~~~~aPe~~~~-~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~-----~~~~~~~~~~~~~~----~~~~~----- 225 (256)
T cd05112 161 TKFPVKWSSPEVFSF-SKYSSKSDVWSFGVLMWEVFSEGKTPYENRS-----NSEVVETINAGFRL----YKPRL----- 225 (256)
T ss_pred CccchhhcCHhHhcc-CCcChHHHHHHHHHHHHHHHcCCCCCCCcCC-----HHHHHHHHhCCCCC----CCCCC-----
Confidence 123457999998544 678999999999999999998 999987422 22222222211111 11111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHH
Q 007935 546 AKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~ 579 (584)
....+.+++.+||+.+|++|||+.|+++.|.
T Consensus 226 ---~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 226 ---ASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred ---CCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 1135667899999999999999999998873
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.2e-26 Score=221.48 Aligned_cols=206 Identities=25% Similarity=0.357 Sum_probs=151.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
...||+|++|.||+|....+ ..||+|.+..... ..+.|.+|+.++++++|||++++++++. .+..++||||
T Consensus 11 ~~~ig~g~~~~v~~~~~~~~------~~~~lK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~ 81 (260)
T cd05069 11 DVKLGQGCFGEVWMGTWNGT------TKVAIKTLKPGTM--MPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEF 81 (260)
T ss_pred eeeecCcCCCeEEEEEEcCC------ceEEEEEcccCCc--cHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEc
Confidence 35799999999999988665 4699998875432 2367999999999999999999999874 5678999999
Q ss_pred ccCCcHHHHHhc---------------------------cc--ccccCCCCccccccCeEEecCCCccc-----------
Q 007935 427 IRNGSLYAALHG---------------------------FG--LNRLLPGTSKVTKNETIVTSGTGSRI----------- 466 (584)
Q Consensus 427 ~~~GsL~~~L~~---------------------------~g--~~~~~~~~~~i~~~~~~~~~~~~~~~----------- 466 (584)
+++|+|.++++. .| |+++.++|..+..+...+..+++...
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~ 161 (260)
T cd05069 82 MGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQ 161 (260)
T ss_pred CCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCcccccC
Confidence 999999777643 22 46667777766666666666665332
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC-CCCccccChhhhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER-RPLSEVIDPALVKE 543 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~d~~~~~~ 543 (584)
..++..|+|||+.. +..++.++|||||||++|||+| |+.||.+... ........... .+.+...
T Consensus 162 ~~~~~~~y~~Pe~~~-~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~------- 228 (260)
T cd05069 162 GAKFPIKWTAPEAAL-YGRFTIKSDVWSFGILLTELVTKGRVPYPGMVN-----REVLEQVERGYRMPCPQGC------- 228 (260)
T ss_pred CCccchhhCCHHHhc-cCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHHcCCCCCCCccc-------
Confidence 12455799999854 4678999999999999999999 8999875321 11222221111 1111111
Q ss_pred hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHh
Q 007935 544 IHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580 (584)
Q Consensus 544 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 580 (584)
...+.+++.+||+.||++||++++|.+.|++
T Consensus 229 ------~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 229 ------PESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred ------CHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 1245567888999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.6e-26 Score=226.63 Aligned_cols=223 Identities=25% Similarity=0.352 Sum_probs=155.2
Q ss_pred ceeceeecCceEEEEEecCCC-----------CCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEE
Q 007935 347 AYVVGKSKNGIMYKVVVGRGS-----------GMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYY 415 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~-----------~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~ 415 (584)
.+.||+|+||.||++...... .......||+|.++........++|.+|++++++++|+||+++++++.
T Consensus 10 ~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~ 89 (296)
T cd05095 10 KEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLAVCI 89 (296)
T ss_pred eeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEe
Confidence 457999999999998654321 111236799999986544444578999999999999999999999999
Q ss_pred eCCceeEeeecccCCcHHHHHhc------------------------------------c--cccccCCCCccccccCeE
Q 007935 416 ANDEKLLISDFIRNGSLYAALHG------------------------------------F--GLNRLLPGTSKVTKNETI 457 (584)
Q Consensus 416 ~~~~~~lV~Ey~~~GsL~~~L~~------------------------------------~--g~~~~~~~~~~i~~~~~~ 457 (584)
..+..++||||+++|+|.++++. . -|+++.+.|+.+..+..+
T Consensus 90 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~~~~~~ 169 (296)
T cd05095 90 TSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGKNYTI 169 (296)
T ss_pred cCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEEcCCCCE
Confidence 99999999999999999777643 2 246666777766666666
Q ss_pred EecCCCcccc-------------cCCCcccCccccccCCCCCCccchhhHHHHHHHHHh--CCCCCCCCCCCCCcHHHHH
Q 007935 458 VTSGTGSRIS-------------AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT--GRLPDAGPENDGKGLESLV 522 (584)
Q Consensus 458 ~~~~~~~~~~-------------~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt--G~~p~~~~~~~~~~l~~~~ 522 (584)
+..++|.... .++..|+|||+... ..++.++|||||||++|||+| |..||....... .+.. .
T Consensus 170 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~-~~~~-~ 246 (296)
T cd05095 170 KIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILL-GKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQ-VIEN-T 246 (296)
T ss_pred EeccCcccccccCCcceeccCcCcCccccCCHHHHhc-CCccchhhhhHHHHHHHHHHHhCCCCCccccChHH-HHHH-H
Confidence 6666664321 22467999998554 578999999999999999998 778886432211 1111 1
Q ss_pred HHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHh
Q 007935 523 RKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580 (584)
Q Consensus 523 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 580 (584)
......... ....+.. ..+...+.+++.+||+.||++||++.||++.|++
T Consensus 247 ~~~~~~~~~--~~~~~~~------~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 247 GEFFRDQGR--QVYLPKP------ALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred HHHHhhccc--cccCCCC------CCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 111111000 0000000 0011345678889999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.2e-26 Score=224.71 Aligned_cols=205 Identities=19% Similarity=0.302 Sum_probs=151.7
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeecc
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 427 (584)
+.||.|++|.||+|+...++ ..||+|.+.........+.+.+|++++++++|+||+++++++.++...++|+||+
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (274)
T cd06609 7 ECIGKGSFGEVYKAIDKRTN-----QVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC 81 (274)
T ss_pred hhhcCCCCeEEEEEEECCCC-----eEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence 46999999999999987765 8999999976544444577999999999999999999999999999999999999
Q ss_pred cCCcHHHHHhc------------------------cc--ccccCCCCccccccCeEEecCCCcc-----------cccCC
Q 007935 428 RNGSLYAALHG------------------------FG--LNRLLPGTSKVTKNETIVTSGTGSR-----------ISAIS 470 (584)
Q Consensus 428 ~~GsL~~~L~~------------------------~g--~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~~gt 470 (584)
++|+|.++++. .+ |.++.+.|..+..++.....+++.. ...++
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~ 161 (274)
T cd06609 82 GGGSCLDLLKPGKLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTFVGT 161 (274)
T ss_pred CCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecccccccccccCC
Confidence 99999766653 22 3455555555555555565555422 23567
Q ss_pred CcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcC-CCCccc-cChhhhhhhhHHH
Q 007935 471 NVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER-RPLSEV-IDPALVKEIHAKR 548 (584)
Q Consensus 471 ~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~~-~d~~~~~~~~~~~ 548 (584)
..|+|||++.. ..++.++|||||||++|||+||+.||..... ........... ..+... +++
T Consensus 162 ~~y~~PE~~~~-~~~~~~sDv~slG~il~~l~tg~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~---------- 225 (274)
T cd06609 162 PFWMAPEVIKQ-SGYDEKADIWSLGITAIELAKGEPPLSDLHP-----MRVLFLIPKNNPPSLEGNKFSK---------- 225 (274)
T ss_pred ccccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCcccCch-----HHHHHHhhhcCCCCCcccccCH----------
Confidence 78999999554 5699999999999999999999999975321 11111111111 111111 222
Q ss_pred HHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 549 QVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 549 ~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||..+|++|||++++++
T Consensus 226 ---~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 226 ---PFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred ---HHHHHHHHHhhCChhhCcCHHHHhh
Confidence 3456778899999999999999975
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.9e-26 Score=227.74 Aligned_cols=208 Identities=21% Similarity=0.213 Sum_probs=151.8
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc--chhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA--TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~--~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
++||+|+||.||++.....+ +.||||.+..... ....+.+.+|+.++++++|+||+++++.+.+++..++|||
T Consensus 6 ~~ig~G~~g~v~~~~~~~~~-----~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 6 RVLGKGGFGEVCACQVRATG-----KMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred EEeecCCCeEEEEEEEcCCC-----ceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 57999999999999998776 8999999875421 2223567899999999999999999999999999999999
Q ss_pred cccCCcHHHHHhc---------------------------c--cccccCCCCccccccCeEEecCCCcc----------c
Q 007935 426 FIRNGSLYAALHG---------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSR----------I 466 (584)
Q Consensus 426 y~~~GsL~~~L~~---------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~----------~ 466 (584)
|+++|+|.++++. . -|+++.+.|+.+..+......++|.. .
T Consensus 81 ~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05630 81 LMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG 160 (285)
T ss_pred ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCccccC
Confidence 9999999776632 2 24556666666665566666666532 1
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhc-CCCCccccChhhhhhhh
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE-RRPLSEVIDPALVKEIH 545 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~d~~~~~~~~ 545 (584)
..|+..|+|||++.. ..++.++|||||||++|||++|+.||....... ... ........ .......+++
T Consensus 161 ~~g~~~y~aPE~~~~-~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~------- 230 (285)
T cd05630 161 RVGTVGYMAPEVVKN-ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI-KRE-EVERLVKEVQEEYSEKFSP------- 230 (285)
T ss_pred CCCCccccChHHHcC-CCCCCccccHHHHHHHHHHHhCCCCCCCCCccc-hHH-HHHhhhhhhhhhcCccCCH-------
Confidence 357889999999654 679999999999999999999999997532211 111 11111110 1111222333
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCC-----hHHHHH
Q 007935 546 AKRQVLATFHIALNCTELDPEFRPR-----MRTVSE 576 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RPt-----~~ev~~ 576 (584)
.+.+++..||+.||++||| +.|+++
T Consensus 231 ------~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 231 ------DARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred ------HHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 3345777799999999999 788875
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.7e-26 Score=226.13 Aligned_cols=221 Identities=24% Similarity=0.297 Sum_probs=158.4
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEe--CCceeEeee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYA--NDEKLLISD 425 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~--~~~~~lV~E 425 (584)
+.||+|+||.||++.+...+ ......||||.++........+.|.+|++++++++||||+++++++.. ....++|||
T Consensus 10 ~~ig~g~~~~v~~~~~~~~~-~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 88 (284)
T cd05038 10 KQLGEGHFGKVELCRYDPLG-DNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIME 88 (284)
T ss_pred eeeccCCCeeEEEeeecCCC-CCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEEEEe
Confidence 57999999999999875431 112278999999865443345789999999999999999999999987 557899999
Q ss_pred cccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCcccc----------
Q 007935 426 FIRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRIS---------- 467 (584)
Q Consensus 426 y~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~~---------- 467 (584)
|+++|+|.++++. . -|+++.+.|+.+..+...+..+++....
T Consensus 89 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 168 (284)
T cd05038 89 YLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYV 168 (284)
T ss_pred cCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccccccccccCCcceec
Confidence 9999999877643 2 3566667777776666666666653321
Q ss_pred ----cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCc----------HHHHHHHHhhcCCCCc
Q 007935 468 ----AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKG----------LESLVRKAFRERRPLS 533 (584)
Q Consensus 468 ----~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~----------l~~~~~~~~~~~~~~~ 533 (584)
.++..|+|||.... ..++.++||||||+++|||+||+.|+......... ...+... ........
T Consensus 169 ~~~~~~~~~~~~Pe~~~~-~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 246 (284)
T cd05038 169 KEPGESPIFWYAPECLRT-SKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLEL-LKEGERLP 246 (284)
T ss_pred cCCCCCcccccCcHHHcc-CCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHH-HHcCCcCC
Confidence 23445999998554 57899999999999999999999998653222110 1111111 11111100
Q ss_pred cccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 534 EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 534 ~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
. . .....++.+++.+||+.+|++||||.||+++|++++
T Consensus 247 ~--~---------~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i~ 284 (284)
T cd05038 247 R--P---------PSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRLR 284 (284)
T ss_pred C--C---------ccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhcC
Confidence 0 0 011235677999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.8e-26 Score=232.02 Aligned_cols=202 Identities=16% Similarity=0.230 Sum_probs=152.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcC-CCceeeeeEEEEeCCceeEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQ-HPNIVRLKAFYYANDEKLLI 423 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~-HpnIV~l~g~~~~~~~~~lV 423 (584)
.++||+|+||.||+|....++ +.||+|.++... .....+.+..|..++..+. |++|+++++++.+.+..++|
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv 79 (323)
T cd05615 5 LMVLGKGSFGKVMLAERKGTD-----ELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFV 79 (323)
T ss_pred EEEEEecCCeEEEEEEECCCC-----CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEE
Confidence 468999999999999987765 799999997541 2233467888999999885 57888999999999999999
Q ss_pred eecccCCcHHHHHh-------------------------ccc--ccccCCCCccccccCeEEecCCCccc----------
Q 007935 424 SDFIRNGSLYAALH-------------------------GFG--LNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~-------------------------~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
|||+++|+|.+++. +.| |+++.++|+.+..++.++..++|...
T Consensus 80 ~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~~ 159 (323)
T cd05615 80 MEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTR 159 (323)
T ss_pred EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCCcccc
Confidence 99999999976553 333 57777788777777777777776321
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIH 545 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~ 545 (584)
..||..|+|||++. +..++.++|||||||++|||+||+.||.+.. ...............+..+++
T Consensus 160 ~~~gt~~y~aPE~~~-~~~~~~~~DiwslGvil~elltG~~pf~~~~-----~~~~~~~i~~~~~~~p~~~~~------- 226 (323)
T cd05615 160 TFCGTPDYIAPEIIA-YQPYGKSVDWWAYGVLLYEMLAGQPPFDGED-----EDELFQSIMEHNVSYPKSLSK------- 226 (323)
T ss_pred CccCCccccCHHHHc-CCCCCCccchhhhHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhCCCCCCccCCH-------
Confidence 34899999999854 4678999999999999999999999997532 223333333333333333333
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCChH
Q 007935 546 AKRQVLATFHIALNCTELDPEFRPRMR 572 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ 572 (584)
++.+++.+|++.+|.+|++..
T Consensus 227 ------~~~~li~~~l~~~p~~R~~~~ 247 (323)
T cd05615 227 ------EAVSICKGLMTKHPSKRLGCG 247 (323)
T ss_pred ------HHHHHHHHHcccCHhhCCCCC
Confidence 334577779999999999853
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-25 Score=227.15 Aligned_cols=218 Identities=23% Similarity=0.312 Sum_probs=158.7
Q ss_pred cceeceeecCceEEEEEecCCCC--CCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeE
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSG--MGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLL 422 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~--~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~l 422 (584)
..+.||+|+||.||+++...... ......||+|.++........+++.+|+++++++ +|||||+++++|.+.+..++
T Consensus 16 ~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 95 (314)
T cd05099 16 LGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGPLYV 95 (314)
T ss_pred eeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCceEE
Confidence 45789999999999998643211 1122679999988654444457799999999999 69999999999999999999
Q ss_pred eeecccCCcHHHHHhc-----------------------------------------c--cccccCCCCccccccCeEEe
Q 007935 423 ISDFIRNGSLYAALHG-----------------------------------------F--GLNRLLPGTSKVTKNETIVT 459 (584)
Q Consensus 423 V~Ey~~~GsL~~~L~~-----------------------------------------~--g~~~~~~~~~~i~~~~~~~~ 459 (584)
||||+++|+|.++++. . -|+++.++|+.+..++.++.
T Consensus 96 v~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL 175 (314)
T cd05099 96 IVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTEDNVMKI 175 (314)
T ss_pred EEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcCCCcEEE
Confidence 9999999999877642 1 24566667777766666676
Q ss_pred cCCCcccc-------------cCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHH
Q 007935 460 SGTGSRIS-------------AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKA 525 (584)
Q Consensus 460 ~~~~~~~~-------------~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~ 525 (584)
.+++.... .++..|||||++.. ..++.++|||||||++|||++ |..||.... ........
T Consensus 176 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~~g~~p~~~~~-----~~~~~~~~ 249 (314)
T cd05099 176 ADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFD-RVYTHQSDVWSFGILMWEIFTLGGSPYPGIP-----VEELFKLL 249 (314)
T ss_pred ccccccccccccccccccccCCCCccccCHHHHcc-CCcCccchhhHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHH
Confidence 66664321 23356999998554 678999999999999999999 888986422 22222222
Q ss_pred hhcCC-CCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 526 FRERR-PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 526 ~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
..... ..+..+ ..++.+++.+||+.+|++|||+.|+++.|+++.
T Consensus 250 ~~~~~~~~~~~~-------------~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~ 294 (314)
T cd05099 250 REGHRMDKPSNC-------------THELYMLMRECWHAVPTQRPTFKQLVEALDKVL 294 (314)
T ss_pred HcCCCCCCCCCC-------------CHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 21111 111111 124456888899999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.2e-26 Score=221.30 Aligned_cols=206 Identities=24% Similarity=0.373 Sum_probs=153.4
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEE-eCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYY-ANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~-~~~~~~lV~E 425 (584)
.+.||+|+||.||++...+ ..||+|.++... ..+.|.+|+.++++++|+||+++++++. +++..++|||
T Consensus 11 ~~~lg~g~~~~v~~~~~~~-------~~~~~k~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (256)
T cd05082 11 LQTIGKGEFGDVMLGDYRG-------NKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 80 (256)
T ss_pred eeeecccCCCeEEEEEEcC-------CcEEEEEeCCCc---hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEE
Confidence 4679999999999997753 579999987532 2367999999999999999999999865 4567899999
Q ss_pred cccCCcHHHHHhc---------------------------c--cccccCCCCccccccCeEEecCCCccc--------cc
Q 007935 426 FIRNGSLYAALHG---------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI--------SA 468 (584)
Q Consensus 426 y~~~GsL~~~L~~---------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~--------~~ 468 (584)
|+++|+|.++++. . -|+++.+.|+.+..++..+..+++... ..
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 160 (256)
T cd05082 81 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK 160 (256)
T ss_pred CCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccccCCCCc
Confidence 9999999877643 2 256666777777777777777776432 23
Q ss_pred CCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCC-CCccccChhhhhhhhH
Q 007935 469 ISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERR-PLSEVIDPALVKEIHA 546 (584)
Q Consensus 469 gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~d~~~~~~~~~ 546 (584)
++..|+|||++. +..++.++|||||||++|||++ |+.||... ...+.......... ...+..++
T Consensus 161 ~~~~y~aPE~~~-~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-------- 226 (256)
T cd05082 161 LPVKWTAPEALR-EKKFSTKSDVWSFGILLWEIYSFGRVPYPRI-----PLKDVVPRVEKGYKMDAPDGCPP-------- 226 (256)
T ss_pred cceeecCHHHHc-cCCCCchhhhHHHHHHHHHHHhCCCCCCCCC-----CHHHHHHHHhcCCCCCCCCCCCH--------
Confidence 455799999854 4678999999999999999998 99998642 23333332222111 11122222
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhh
Q 007935 547 KRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581 (584)
Q Consensus 547 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 581 (584)
.+.+++.+||+.+|++|||+.+++++|+++
T Consensus 227 -----~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 227 -----VVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred -----HHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 345678889999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-26 Score=238.24 Aligned_cols=205 Identities=20% Similarity=0.301 Sum_probs=154.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|+....+ +.||||+++... .....+.+.+|++++..++||||+++++++.+++..++||
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 6 IKVIGRGAFGEVWLVRDKDTG-----QVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred EEEEEeCCcEEEEEEEECCCC-----CEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 457999999999999988665 899999997642 2233467899999999999999999999999999999999
Q ss_pred ecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCcc------------
Q 007935 425 DFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR------------ 465 (584)
Q Consensus 425 Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~------------ 465 (584)
||+++|+|.+++. .. .|+++++.|+.+..++.++..++|..
T Consensus 81 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~ 160 (350)
T cd05573 81 EYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYY 160 (350)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccccc
Confidence 9999999976654 22 35777778877777766666665522
Q ss_pred ----------------------------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCc
Q 007935 466 ----------------------------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKG 517 (584)
Q Consensus 466 ----------------------------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~ 517 (584)
...||..|+|||++.. ..++.++|||||||++|||++|+.||....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~Pf~~~~----- 234 (350)
T cd05573 161 LNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRG-TPYGLECDWWSLGVILYEMLYGFPPFYSDT----- 234 (350)
T ss_pred ccccccccccccccccccccccccccccccccCccccCHHHHcC-CCCCCceeeEecchhhhhhccCCCCCCCCC-----
Confidence 1358899999999554 689999999999999999999999997532
Q ss_pred HHHHHHHHhh--cCCCCcc--ccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCC-hHHHHH
Q 007935 518 LESLVRKAFR--ERRPLSE--VIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPR-MRTVSE 576 (584)
Q Consensus 518 l~~~~~~~~~--~~~~~~~--~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt-~~ev~~ 576 (584)
.......... ....++. .+++ .+.+++.+|+. ||.+||+ +.|+++
T Consensus 235 ~~~~~~~i~~~~~~~~~p~~~~~~~-------------~~~~li~~ll~-dp~~R~~s~~~ll~ 284 (350)
T cd05573 235 LQETYNKIINWKESLRFPPDPPVSP-------------EAIDLICRLLC-DPEDRLGSFEEIKS 284 (350)
T ss_pred HHHHHHHHhccCCcccCCCCCCCCH-------------HHHHHHHHHcc-ChhhcCCCHHHHhc
Confidence 1222222222 1111111 1233 33456677997 9999999 999986
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.1e-27 Score=236.94 Aligned_cols=206 Identities=17% Similarity=0.237 Sum_probs=154.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+++....+ +.||+|+++... .....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 6 KSLVGRGHFGEVQVVREKATG-----DIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred EEEEEeccCEEEEEEEECCCC-----CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 467999999999999987765 799999998642 2233467889999999999999999999999999999999
Q ss_pred ecccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc----------
Q 007935 425 DFIRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 425 Ey~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
||+++|+|.++++. . -|+++++.|+.+..++.++..++|...
T Consensus 81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~ 160 (330)
T cd05601 81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNS 160 (330)
T ss_pred CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCceee
Confidence 99999999776642 2 357778888877777777777776431
Q ss_pred --ccCCCcccCcccccc-----CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC--Ccc--c
Q 007935 467 --SAISNVYLAPEARIY-----GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP--LSE--V 535 (584)
Q Consensus 467 --~~gt~~y~aPE~~~~-----~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~--~~~--~ 535 (584)
..||+.|+|||++.. +..++.++|||||||++|||++|+.||.... .............. .+. .
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~-----~~~~~~~i~~~~~~~~~~~~~~ 235 (330)
T cd05601 161 KLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGT-----SAKTYNNIMNFQRFLKFPEDPK 235 (330)
T ss_pred ecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCC-----HHHHHHHHHcCCCccCCCCCCC
Confidence 258899999998642 3567899999999999999999999997422 12222222221111 111 1
Q ss_pred cChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 536 IDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 536 ~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+++ .+.+++..|+. +|++|||+.++++
T Consensus 236 ~~~-------------~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 236 VSS-------------DFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred CCH-------------HHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 222 23446666887 9999999999874
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.4e-26 Score=234.76 Aligned_cols=223 Identities=18% Similarity=0.263 Sum_probs=154.1
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCC------c
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYAND------E 419 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~------~ 419 (584)
.+.||+|+||.||++.....+ +.||||++.... .....+.+.+|+.+++.++||||+++++++.... .
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 96 (355)
T cd07874 22 LKPIGSGAQGIVCAAYDAVLD-----RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQD 96 (355)
T ss_pred EEEeeecCCEEEEEEEecCCC-----ceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccce
Confidence 367999999999999987655 789999997642 2333467889999999999999999999986543 4
Q ss_pred eeEeeecccCCcHH-----------------------HHHhccc--ccccCCCCccccccCeEEecCCCccc--------
Q 007935 420 KLLISDFIRNGSLY-----------------------AALHGFG--LNRLLPGTSKVTKNETIVTSGTGSRI-------- 466 (584)
Q Consensus 420 ~~lV~Ey~~~GsL~-----------------------~~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~-------- 466 (584)
.++||||+++ +|. +|||+.| |++++++|+.+..++.++..++|...
T Consensus 97 ~~lv~e~~~~-~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 175 (355)
T cd07874 97 VYLVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 175 (355)
T ss_pred eEEEhhhhcc-cHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCCCcccc
Confidence 7999999976 443 3455554 67788888888777777777776432
Q ss_pred --ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHH------------------HHh
Q 007935 467 --SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVR------------------KAF 526 (584)
Q Consensus 467 --~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~------------------~~~ 526 (584)
..||..|+|||++. +..++.++|||||||++|||++|+.||.+..... .+...+. ...
T Consensus 176 ~~~~~t~~y~aPE~~~-~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (355)
T cd07874 176 TPYVVTRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID-QWNKVIEQLGTPCPEFMKKLQPTVRNYV 253 (355)
T ss_pred CCccccCCccCHHHHc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHHhhcHHHHHHH
Confidence 35788999999854 4689999999999999999999999997532110 0111100 000
Q ss_pred hcCCCCccccChhh-hhhh------hHHHHHHHHHHHHhcccCCCCCCCCChHHHHHH
Q 007935 527 RERRPLSEVIDPAL-VKEI------HAKRQVLATFHIALNCTELDPEFRPRMRTVSES 577 (584)
Q Consensus 527 ~~~~~~~~~~d~~~-~~~~------~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 577 (584)
...........+.. .... ........+.+++.+|++.||++|||+.|+++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 254 ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred hcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 00000000000000 0000 000112456789999999999999999999863
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-26 Score=233.39 Aligned_cols=158 Identities=20% Similarity=0.315 Sum_probs=120.4
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEe--CCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYA--NDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~--~~~~~lV~ 424 (584)
+..||+|+||.||+|+..++. ..+.||+|.+..... ...+.+|++++++++|||||++++++.. +...++||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~---~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~ 79 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGK---DDRDYALKQIEGTGI---SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF 79 (317)
T ss_pred ccccccCCCeEEEEEEEccCC---CCceEEEEEECCCCC---cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEE
Confidence 457999999999999976431 117899999975422 2567899999999999999999999865 45688999
Q ss_pred ecccCCcHH----------------------------------HHHhccc--ccccCCCCcccc----ccCeEEecCCCc
Q 007935 425 DFIRNGSLY----------------------------------AALHGFG--LNRLLPGTSKVT----KNETIVTSGTGS 464 (584)
Q Consensus 425 Ey~~~GsL~----------------------------------~~L~~~g--~~~~~~~~~~i~----~~~~~~~~~~~~ 464 (584)
||+.+ +|. +|||+.| |++++++|+.+. .+..++..|+|.
T Consensus 80 e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07868 80 DYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred eccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCc
Confidence 99865 543 3445444 577777777663 234566666653
Q ss_pred c--------------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCC
Q 007935 465 R--------------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGP 511 (584)
Q Consensus 465 ~--------------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~ 511 (584)
. ...||+.|+|||++.....++.++||||+||++|||+||++||...
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred eeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 2 2357888999998665456899999999999999999999999754
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.8e-26 Score=223.77 Aligned_cols=206 Identities=20% Similarity=0.314 Sum_probs=151.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc-----chhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCcee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-----TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKL 421 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~-----~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~ 421 (584)
.+.||+|+||.||+|....+ ..+|||.++.... ....+.+.+|++++++++|+||+++++++.+.+..+
T Consensus 5 ~~~ig~g~~~~v~~~~~~~~------~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 78 (265)
T cd06631 5 GEVLGKGAYGTVYCGLTNQG------QLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTIS 78 (265)
T ss_pred cceEeccCCeEEEEEEEcCC------CeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEE
Confidence 45799999999999987554 7899999875421 122356899999999999999999999999999999
Q ss_pred EeeecccCCcHHHHHhc-------------------------c--cccccCCCCccccccCeEEecCCCcc---------
Q 007935 422 LISDFIRNGSLYAALHG-------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSR--------- 465 (584)
Q Consensus 422 lV~Ey~~~GsL~~~L~~-------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~--------- 465 (584)
+||||+++|+|.+++.. . .|.++.+.|..+..++.++..+++..
T Consensus 79 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 158 (265)
T cd06631 79 IFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLH 158 (265)
T ss_pred EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhcccc
Confidence 99999999999877643 2 34566666766666666666665422
Q ss_pred --------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhh--cCCCCccc
Q 007935 466 --------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR--ERRPLSEV 535 (584)
Q Consensus 466 --------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~--~~~~~~~~ 535 (584)
...|+..|+|||++. +..++.++|||||||++|||++|+.||..... .......... .....+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~pe~~~-~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~ 233 (265)
T cd06631 159 GTHSNMLKSMHGTPYWMAPEVIN-ESGYGRKSDIWSIGCTVFEMATGKPPLASMDR----LAAMFYIGAHRGLMPRLPDS 233 (265)
T ss_pred ccccccccccCCCccccChhhhc-CCCCcchhhHHHHHHHHHHHHhCCCccccCCh----HHHHHHhhhccCCCCCCCCC
Confidence 124678899999954 46789999999999999999999999974321 1111111111 11111222
Q ss_pred cChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 536 IDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 536 ~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+++ .+.+++.+||+.+|++||++.|+++
T Consensus 234 ~~~-------------~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 234 FSA-------------AAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred CCH-------------HHHHHHHHHhcCCcccCCCHHHHhc
Confidence 222 3456778899999999999999875
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-25 Score=219.96 Aligned_cols=207 Identities=26% Similarity=0.385 Sum_probs=156.4
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|...+ +.||+|.++.... ..+++.+|+.++++++|+||+++++++.+.+..++||||
T Consensus 11 ~~~ig~g~~g~v~~~~~~~-------~~v~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 81 (256)
T cd05039 11 GATIGKGEFGDVMLGDYRG-------QKVAVKCLKDDST--AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEY 81 (256)
T ss_pred eeeeecCCCceEEEEEecC-------cEEEEEEeccchh--HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEe
Confidence 4679999999999998753 6899999987533 347899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc---------------------------c--cccccCCCCccccccCeEEecCCCccc--------ccC
Q 007935 427 IRNGSLYAALHG---------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI--------SAI 469 (584)
Q Consensus 427 ~~~GsL~~~L~~---------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~--------~~g 469 (584)
+++|+|.++++. . -|+++.+.|+.+..++..+..+++... ..+
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~~ 161 (256)
T cd05039 82 MAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKL 161 (256)
T ss_pred cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcccccccccccccccCCC
Confidence 999999877642 2 356677777777666666666665322 233
Q ss_pred CCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCC-CCccccChhhhhhhhHH
Q 007935 470 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERR-PLSEVIDPALVKEIHAK 547 (584)
Q Consensus 470 t~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~ 547 (584)
+..|+|||++.. ..++.++||||||+++||+++ |+.||.... ............. ..+..++
T Consensus 162 ~~~~~ape~~~~-~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~---------- 225 (256)
T cd05039 162 PVKWTAPEALRE-KKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-----LKDVVPHVEKGYRMEAPEGCP---------- 225 (256)
T ss_pred cccccCchhhcC-CcCCcHHHHHHHHHHHHHHHhcCCCCCCCCC-----HHHHHHHHhcCCCCCCccCCC----------
Confidence 556999998654 578999999999999999997 999986421 2222222111111 1111112
Q ss_pred HHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhh
Q 007935 548 RQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581 (584)
Q Consensus 548 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 581 (584)
..+.+++.+||+.+|++|||+.|++++|+++
T Consensus 226 ---~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 226 ---PEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred ---HHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 2456688889999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.2e-26 Score=240.59 Aligned_cols=217 Identities=20% Similarity=0.262 Sum_probs=148.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC--------C
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN--------D 418 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~--------~ 418 (584)
.+.||+|+||.||+|.....+ +.||||++.... ....+|+.++++++|||||++++++... .
T Consensus 71 ~~~LG~G~fg~Vy~~~~~~~~-----~~vAiK~i~~~~-----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 140 (440)
T PTZ00036 71 GNIIGNGSFGVVYEAICIDTS-----EKVAIKKVLQDP-----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI 140 (440)
T ss_pred eEEEEeCCCEEEEEEEECCCC-----CEEEEEEEecCc-----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence 568999999999999987665 799999886532 2345799999999999999999987542 1
Q ss_pred ceeEeeecccCCcHH-----------------------------HHHhccc--ccccCCCCccccccC-eEEecCCCccc
Q 007935 419 EKLLISDFIRNGSLY-----------------------------AALHGFG--LNRLLPGTSKVTKNE-TIVTSGTGSRI 466 (584)
Q Consensus 419 ~~~lV~Ey~~~GsL~-----------------------------~~L~~~g--~~~~~~~~~~i~~~~-~~~~~~~~~~~ 466 (584)
..++||||+++ +|. .|||..| |++++++|+.+..+. .++..++|...
T Consensus 141 ~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~ 219 (440)
T PTZ00036 141 FLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAK 219 (440)
T ss_pred EEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccccch
Confidence 36689999986 453 3344444 678888888776543 46677776432
Q ss_pred ----------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhc--------
Q 007935 467 ----------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE-------- 528 (584)
Q Consensus 467 ----------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~-------- 528 (584)
..||+.|||||++.....++.++|||||||++|||+||.+||.+.... ..+.......-..
T Consensus 220 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~-~~~~~i~~~~~~p~~~~~~~~ 298 (440)
T PTZ00036 220 NLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSV-DQLVRIIQVLGTPTEDQLKEM 298 (440)
T ss_pred hccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCCHHHHHHh
Confidence 357889999998655457999999999999999999999999753221 1111111110000
Q ss_pred -----CCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 529 -----RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 529 -----~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
...++......+...+ +.....++.+++.+||+.||.+|||+.|+++
T Consensus 299 ~~~~~~~~~~~~~~~~l~~~~-p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~ 350 (440)
T PTZ00036 299 NPNYADIKFPDVKPKDLKKVF-PKGTPDDAINFISQFLKYEPLKRLNPIEALA 350 (440)
T ss_pred chhhhcccCCccCchhHHHHh-ccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence 0000111111111100 1112246778999999999999999999984
|
|
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-25 Score=228.93 Aligned_cols=218 Identities=24% Similarity=0.321 Sum_probs=159.8
Q ss_pred cceeceeecCceEEEEEecCCCC--CCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeE
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSG--MGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLL 422 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~--~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~l 422 (584)
..+.||+|+||.||+|.....+. ......||+|.++........+++.+|+++++++ +||||++++++|.+++..++
T Consensus 16 i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 95 (334)
T cd05100 16 LGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 95 (334)
T ss_pred ecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCceEE
Confidence 35689999999999998643211 1122579999887654444457899999999999 89999999999999999999
Q ss_pred eeecccCCcHHHHHhc-----------------------------------------c--cccccCCCCccccccCeEEe
Q 007935 423 ISDFIRNGSLYAALHG-----------------------------------------F--GLNRLLPGTSKVTKNETIVT 459 (584)
Q Consensus 423 V~Ey~~~GsL~~~L~~-----------------------------------------~--g~~~~~~~~~~i~~~~~~~~ 459 (584)
||||+++|+|.+++.. . -|+++.+.|+.+..+..++.
T Consensus 96 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~~~~~kL 175 (334)
T cd05100 96 LVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDNVMKI 175 (334)
T ss_pred EEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEE
Confidence 9999999999877642 1 24566667776666666666
Q ss_pred cCCCccc-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHH
Q 007935 460 SGTGSRI-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKA 525 (584)
Q Consensus 460 ~~~~~~~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~ 525 (584)
.+++... ..++..|||||++.. ..++.++|||||||++|||++ |..||... ....+....
T Consensus 176 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~-----~~~~~~~~~ 249 (334)
T cd05100 176 ADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLLWEIFTLGGSPYPGI-----PVEELFKLL 249 (334)
T ss_pred CCcccceecccccccccccCCCcCceEcCHHHhcc-CCcCchhhhHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHHH
Confidence 6665322 123456999998554 678999999999999999999 88888642 233333332
Q ss_pred hhcCC-CCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 526 FRERR-PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 526 ~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
..... ..+... ...+.+++.+||+.+|++|||+.|+++.|+++.
T Consensus 250 ~~~~~~~~~~~~-------------~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~ 294 (334)
T cd05100 250 KEGHRMDKPANC-------------THELYMIMRECWHAVPSQRPTFKQLVEDLDRVL 294 (334)
T ss_pred HcCCCCCCCCCC-------------CHHHHHHHHHHcccChhhCcCHHHHHHHHHHHh
Confidence 22211 111111 124567888899999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.6e-27 Score=237.45 Aligned_cols=205 Identities=21% Similarity=0.309 Sum_probs=160.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEec---CCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCc--ee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLT---EGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDE--KL 421 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~---~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~--~~ 421 (584)
..+||+|+|-+||||.....+ ..||=-.++ ....+...++|..|+++|+.|+|||||+++.++.+... .-
T Consensus 45 ~evLGrGafKtVYka~De~~g-----iEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in 119 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEG-----IEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTIN 119 (632)
T ss_pred hhhcccccceeeeeccccccc-----hhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceee
Confidence 457999999999999997776 555532222 22344556899999999999999999999999988665 77
Q ss_pred EeeecccCCcHHHHHhcc-----------------------------cccccCCCCcccccc-CeEEecCCCc-------
Q 007935 422 LISDFIRNGSLYAALHGF-----------------------------GLNRLLPGTSKVTKN-ETIVTSGTGS------- 464 (584)
Q Consensus 422 lV~Ey~~~GsL~~~L~~~-----------------------------g~~~~~~~~~~i~~~-~~~~~~~~~~------- 464 (584)
+|+|.|..|+|..|+..+ +|+|++.+|+.|.-. +.+++.|.|.
T Consensus 120 ~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s 199 (632)
T KOG0584|consen 120 FITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS 199 (632)
T ss_pred eeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhcc
Confidence 999999999998887643 577777777766554 5666666552
Q ss_pred --ccccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC--CccccChhh
Q 007935 465 --RISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP--LSEVIDPAL 540 (584)
Q Consensus 465 --~~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~d~~~ 540 (584)
....||+.|||||++. ..|++.+||||||+.|+||+|+..||.. ..+..++.+++..+..| +..+-||++
T Consensus 200 ~aksvIGTPEFMAPEmYE--E~YnE~VDVYaFGMCmLEMvT~eYPYsE----C~n~AQIYKKV~SGiKP~sl~kV~dPev 273 (632)
T KOG0584|consen 200 HAKSVIGTPEFMAPEMYE--ENYNELVDVYAFGMCMLEMVTSEYPYSE----CTNPAQIYKKVTSGIKPAALSKVKDPEV 273 (632)
T ss_pred ccceeccCccccChHHHh--hhcchhhhhhhhhHHHHHHHhccCChhh----hCCHHHHHHHHHcCCCHHHhhccCCHHH
Confidence 2358999999999844 5899999999999999999999999975 55667777777766544 455667777
Q ss_pred hhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 541 VKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 541 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+..+ .+|+.. ..+|||+.|+++
T Consensus 274 r~fI-------------ekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 274 REFI-------------EKCLAT-KSERLSAKELLK 295 (632)
T ss_pred HHHH-------------HHHhcC-chhccCHHHHhh
Confidence 6544 449999 999999999985
|
|
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.7e-26 Score=235.91 Aligned_cols=221 Identities=18% Similarity=0.266 Sum_probs=153.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC-CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCC-----ce
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARVQHPNIVRLKAFYYAND-----EK 420 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~-----~~ 420 (584)
.+.||+|+||.||++....++ +.||||++... ......+++.+|+++++.++||||+++++++...+ ..
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 79 (372)
T cd07853 5 DRPIGYGAFGVVWSVTDPRDG-----KRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEI 79 (372)
T ss_pred cceeeeCCCEEEEEEEECCCC-----CEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceE
Confidence 457999999999999987655 79999998754 22233467899999999999999999999998876 78
Q ss_pred eEeeecccCCcHHH-------------------------HHhccc--ccccCCCCccccccCeEEecCCCccc-------
Q 007935 421 LLISDFIRNGSLYA-------------------------ALHGFG--LNRLLPGTSKVTKNETIVTSGTGSRI------- 466 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~-------------------------~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~------- 466 (584)
++||||+.+ +|.+ |||..| |+++++.|+.+..+..++..++|...
T Consensus 80 ~lv~e~~~~-~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~ 158 (372)
T cd07853 80 YVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDES 158 (372)
T ss_pred EEEeecccc-CHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCcc
Confidence 999999974 6643 344444 67788888888777777777776322
Q ss_pred -----ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCcc-------
Q 007935 467 -----SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSE------- 534 (584)
Q Consensus 467 -----~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~------- 534 (584)
..+|..|+|||++.....++.++|||||||++|||++|+.||.+..... .+. .+...... ....+
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~-~i~~~~g~-~~~~~~~~~~~~ 235 (372)
T cd07853 159 KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQ-QLD-LITDLLGT-PSLEAMRSACEG 235 (372)
T ss_pred ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHH-HHH-HHHHHcCC-CCHHHHHHhhHH
Confidence 2467889999986554568999999999999999999999997532210 011 01000000 00000
Q ss_pred ---------ccChhhhhhh-hHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 535 ---------VIDPALVKEI-HAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 535 ---------~~d~~~~~~~-~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
...+...... .......++.+++.+|++.||++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 287 (372)
T cd07853 236 ARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALA 287 (372)
T ss_pred HHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhc
Confidence 0000000000 00011235678999999999999999999985
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-25 Score=222.50 Aligned_cols=206 Identities=17% Similarity=0.303 Sum_probs=152.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|.....+ ..||+|.+.........+.|.+|+.++++++||||+++++++.+++..++||||
T Consensus 9 ~~~ig~G~~~~vy~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06641 9 LEKIGKGSFGEVFKGIDNRTQ-----KVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 83 (277)
T ss_pred heeEeecCCeEEEEEEECCCC-----cEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEe
Confidence 356999999999999876654 799999987654444457899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc------------------------cc--ccccCCCCccccccCeEEecCCCcc-----------cccC
Q 007935 427 IRNGSLYAALHG------------------------FG--LNRLLPGTSKVTKNETIVTSGTGSR-----------ISAI 469 (584)
Q Consensus 427 ~~~GsL~~~L~~------------------------~g--~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~~g 469 (584)
+++|+|.++++. .| |.++.+.|+.+..++.....+++.. ...+
T Consensus 84 ~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 163 (277)
T cd06641 84 LGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVG 163 (277)
T ss_pred CCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccchhhhccccC
Confidence 999999777642 22 4555566666665565666665422 1246
Q ss_pred CCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC-CCccccChhhhhhhhHHH
Q 007935 470 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR-PLSEVIDPALVKEIHAKR 548 (584)
Q Consensus 470 t~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~ 548 (584)
+..|+|||++.. ..++.++|||||||++|||++|..||..... ............ .+...++
T Consensus 164 ~~~y~~PE~~~~-~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~----------- 226 (277)
T cd06641 164 TPFWMAPEVIKQ-SAYDSKADIWSLGITAIELAKGEPPHSELHP-----MKVLFLIPKNNPPTLEGNYS----------- 226 (277)
T ss_pred CccccChhhhcc-CCCCchhhHHHHHHHHHHHHcCCCCCCccch-----HHHHHHHhcCCCCCCCcccC-----------
Confidence 788999998554 6788999999999999999999999864221 111211111111 1111122
Q ss_pred HHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 549 QVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 549 ~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
..+.+++.+||+.+|.+||++.++++
T Consensus 227 --~~~~~~i~~~l~~~p~~Rp~~~~~l~ 252 (277)
T cd06641 227 --KPLKEFVEACLNKEPSFRPTAKELLK 252 (277)
T ss_pred --HHHHHHHHHHccCChhhCcCHHHHHh
Confidence 23456778899999999999999987
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-25 Score=221.70 Aligned_cols=215 Identities=21% Similarity=0.315 Sum_probs=159.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|.....+. .....||+|.+.........+++.+|+.++++++||||++++++|.. +..++||||
T Consensus 12 ~~~ig~g~~g~v~~~~~~~~~~-~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~ 89 (279)
T cd05057 12 IKVLGSGAFGTVYKGVWIPEGE-KVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQLITQL 89 (279)
T ss_pred cceecCCCCccEEEEEEecCCC-CcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEEEEec
Confidence 4679999999999999866432 22357999998876544445789999999999999999999999987 789999999
Q ss_pred ccCCcHHHHHhc--------------------------cc--ccccCCCCccccccCeEEecCCCccc------------
Q 007935 427 IRNGSLYAALHG--------------------------FG--LNRLLPGTSKVTKNETIVTSGTGSRI------------ 466 (584)
Q Consensus 427 ~~~GsL~~~L~~--------------------------~g--~~~~~~~~~~i~~~~~~~~~~~~~~~------------ 466 (584)
+++|+|.++++. .| |+++.+.|..+..+..++..+++...
T Consensus 90 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~ 169 (279)
T cd05057 90 MPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAE 169 (279)
T ss_pred CCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccccCcccceecC
Confidence 999999777643 23 56777777777666666666665322
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC-CCCccccChhhhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER-RPLSEVIDPALVKE 543 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~d~~~~~~ 543 (584)
..++..|+|||.... ..++.++|||||||++||++| |+.||.... ..++........ .+.+...+.
T Consensus 170 ~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~----- 238 (279)
T cd05057 170 GGKVPIKWMALESILH-RIYTHKSDVWSYGVTVWELMTFGAKPYEGIP-----AVEIPDLLEKGERLPQPPICTI----- 238 (279)
T ss_pred CCcccccccCHHHhhc-CCcCchhhHHHHHHHHHHHhcCCCCCCCCCC-----HHHHHHHHhCCCCCCCCCCCCH-----
Confidence 112457999998544 678999999999999999999 999997532 223332222211 111222222
Q ss_pred hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 544 IHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 544 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.+.+++.+||..+|++||++.++++.|+++.
T Consensus 239 --------~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~ 269 (279)
T cd05057 239 --------DVYMVLVKCWMIDAESRPTFKELINEFSKMA 269 (279)
T ss_pred --------HHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 3456777899999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-25 Score=224.22 Aligned_cols=208 Identities=21% Similarity=0.337 Sum_probs=152.9
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeecc
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 427 (584)
+.||+|+||.||+|+....+ +.||+|.+... .....+.+.+|++++++++||||+++++++..++..++||||+
T Consensus 18 ~~lg~g~~g~vy~~~~~~~~-----~~~~~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 91 (292)
T cd06644 18 GELGDGAFGKVYKAKNKETG-----ALAAAKVIETK-SEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC 91 (292)
T ss_pred heecCCCCeEEEEEEECCCC-----ceEEEEEeccC-CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence 46999999999999987765 79999999764 3334578999999999999999999999999999999999999
Q ss_pred cCCcHHHHH--------------------------hccc--ccccCCCCccccccCeEEecCCCccc-----------cc
Q 007935 428 RNGSLYAAL--------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSRI-----------SA 468 (584)
Q Consensus 428 ~~GsL~~~L--------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~-----------~~ 468 (584)
++|+|..++ |+.| |+++.+.|+.+..++.++..++|... ..
T Consensus 92 ~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 171 (292)
T cd06644 92 PGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRDSFI 171 (292)
T ss_pred CCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceeccccccccceec
Confidence 999986554 3333 46667777777666667777766321 24
Q ss_pred CCCcccCcccccc----CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhh
Q 007935 469 ISNVYLAPEARIY----GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEI 544 (584)
Q Consensus 469 gt~~y~aPE~~~~----~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~ 544 (584)
++..|+|||++.. ...++.++|||||||++|||++|+.||..... ............+ ....+.
T Consensus 172 ~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~-----~~~~~~~~~~~~~--~~~~~~----- 239 (292)
T cd06644 172 GTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP-----MRVLLKIAKSEPP--TLSQPS----- 239 (292)
T ss_pred CCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH-----HHHHHHHhcCCCc--cCCCCc-----
Confidence 6788999998642 24578899999999999999999999864221 1222222211111 111110
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
....++.+++.+||+.+|++||++.|+++
T Consensus 240 ---~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 240 ---KWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred ---ccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 01124556888899999999999999975
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.2e-26 Score=225.98 Aligned_cols=210 Identities=20% Similarity=0.201 Sum_probs=151.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||+||++.....+ +.||+|.+.... .....+.+.+|++++++++|+||+++++++.+++..++||
T Consensus 5 ~~~lg~G~~g~vy~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~ 79 (285)
T cd05632 5 YRVLGKGGFGEVCACQVRATG-----KMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVL 79 (285)
T ss_pred EEEEecCCCeEEEEEEECCCC-----cEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEE
Confidence 357999999999999987765 799999987542 1222356789999999999999999999999999999999
Q ss_pred ecccCCcHHHHHh---------------------------ccc--ccccCCCCccccccCeEEecCCCcc----------
Q 007935 425 DFIRNGSLYAALH---------------------------GFG--LNRLLPGTSKVTKNETIVTSGTGSR---------- 465 (584)
Q Consensus 425 Ey~~~GsL~~~L~---------------------------~~g--~~~~~~~~~~i~~~~~~~~~~~~~~---------- 465 (584)
||+++|+|.++++ ..| |+++.+.|..+..+..+...+++..
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~ 159 (285)
T cd05632 80 TIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIR 159 (285)
T ss_pred EeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCCccc
Confidence 9999999976653 222 4556666666655566666666532
Q ss_pred cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhh
Q 007935 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIH 545 (584)
Q Consensus 466 ~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~ 545 (584)
...|+..|+|||++.. ..++.++|||||||++|||+||+.||...... .....+..............+++
T Consensus 160 ~~~g~~~~~aPE~~~~-~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~------- 230 (285)
T cd05632 160 GRVGTVGYMAPEVLNN-QRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEK-VKREEVDRRVLETEEVYSAKFSE------- 230 (285)
T ss_pred CCCCCcCccChHHhcC-CCCCcccchHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhhhccccccCccCCH-------
Confidence 2357889999999544 67899999999999999999999999753211 11112222211111111112222
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCC-----hHHHHH
Q 007935 546 AKRQVLATFHIALNCTELDPEFRPR-----MRTVSE 576 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RPt-----~~ev~~ 576 (584)
.+.+++..|++.||++||+ +.+++.
T Consensus 231 ------~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 231 ------EAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred ------HHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 3456778899999999999 556654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-25 Score=222.76 Aligned_cols=217 Identities=19% Similarity=0.257 Sum_probs=153.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC--CceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN--DEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~--~~~~lV~ 424 (584)
.+.||.|++|.||++.....+ +.||+|.+.........+++.+|++++++++||||++++++|.+. +..++||
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~-----~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 6 LSRLGEGAGGSVTKCRLKNTG-----MIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred EEEeccCCceEEEEEEECCCC-----eEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 357999999999999997765 899999998654434457899999999999999999999998754 4689999
Q ss_pred ecccCCcHHHHHh-----------------------------cc--cccccCCCCccccccCeEEecCCCcc--------
Q 007935 425 DFIRNGSLYAALH-----------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR-------- 465 (584)
Q Consensus 425 Ey~~~GsL~~~L~-----------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~-------- 465 (584)
||+++|+|.++++ +. -|+++.+.++.+..+..++..+++..
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 160 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLA 160 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeecccccccccccc
Confidence 9999999976653 22 23445555555555555666666532
Q ss_pred -cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC-CccccChhhhhh
Q 007935 466 -ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP-LSEVIDPALVKE 543 (584)
Q Consensus 466 -~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~d~~~~~~ 543 (584)
...++..|+|||.+. +..++.++||||+||++|||++|+.||...........+..........+ +........
T Consensus 161 ~~~~~~~~y~~pE~~~-~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 236 (287)
T cd06621 161 GTFTGTSFYMAPERIQ-GKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGI--- 236 (287)
T ss_pred ccccCCccccCHHHhc-CCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCC---
Confidence 234677899999854 46789999999999999999999999975432111222222222221111 111111000
Q ss_pred hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 544 IHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 544 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.....+.+++.+||+.+|.+|||+.|+++
T Consensus 237 ----~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 237 ----KWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred ----chHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 11235677999999999999999999986
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.7e-26 Score=234.98 Aligned_cols=208 Identities=17% Similarity=0.217 Sum_probs=151.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC--CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG--DATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+++...++ +.||+|.+.+. ......+.+.+|+.+++.++|||||++++++.+++..++||
T Consensus 48 ~~~lG~G~fg~Vy~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~ 122 (370)
T cd05621 48 VKVIGRGAFGEVQLVRHKSSQ-----KVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVM 122 (370)
T ss_pred EEEEEecCCeEEEEEEECCCC-----CEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 467999999999999998765 79999998653 12222356889999999999999999999999999999999
Q ss_pred ecccCCcHHHHHh------------------------cc--cccccCCCCccccccCeEEecCCCcc------------c
Q 007935 425 DFIRNGSLYAALH------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR------------I 466 (584)
Q Consensus 425 Ey~~~GsL~~~L~------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~------------~ 466 (584)
||+++|+|.+++. .. -|++++++|+.+..++.++..++|.. .
T Consensus 123 Ey~~gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~~~ 202 (370)
T cd05621 123 EYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRCDT 202 (370)
T ss_pred cCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccCCceeccc
Confidence 9999999976653 33 36778888888877777777777632 2
Q ss_pred ccCCCcccCccccccC---CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC--Ccc--ccChh
Q 007935 467 SAISNVYLAPEARIYG---SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP--LSE--VIDPA 539 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~---~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~--~~~--~~d~~ 539 (584)
..||+.|||||++... ..++.++||||+||++|||+||+.||.... .............. ++. .+++
T Consensus 203 ~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~-----~~~~~~~i~~~~~~~~~p~~~~~s~- 276 (370)
T cd05621 203 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADS-----LVGTYSKIMDHKNSLNFPEDVEISK- 276 (370)
T ss_pred CCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCC-----HHHHHHHHHhCCcccCCCCcccCCH-
Confidence 3589999999986432 237899999999999999999999997432 22223333222111 111 1122
Q ss_pred hhhhhhHHHHHHHHHHHHhcccCCCCC--CCCChHHHHHH
Q 007935 540 LVKEIHAKRQVLATFHIALNCTELDPE--FRPRMRTVSES 577 (584)
Q Consensus 540 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~--~RPt~~ev~~~ 577 (584)
.+.+++..|+..++. .||++.|+++.
T Consensus 277 ------------~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 277 ------------HAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred ------------HHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 223455567765544 38899998753
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-25 Score=222.90 Aligned_cols=220 Identities=23% Similarity=0.288 Sum_probs=155.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC--CceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN--DEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~--~~~~lV~ 424 (584)
-+.||+|+||.||.++....+ ......||+|.++........+.|.+|++++++++||||+++++++.+. ...++||
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~~-~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~ 87 (284)
T cd05079 9 IRDLGEGHFGKVELCRYDPEG-DNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIM 87 (284)
T ss_pred ceecCCCCceeEEEEEEccCC-CCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEEEE
Confidence 457999999999999864211 1122789999997654444457899999999999999999999999875 5689999
Q ss_pred ecccCCcHHHHHh--------------------------cc--cccccCCCCccccccCeEEecCCCccc----------
Q 007935 425 DFIRNGSLYAALH--------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 425 Ey~~~GsL~~~L~--------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
||+++|+|.+++. +. -|+++.+.|+.+..+...+..+++...
T Consensus 88 e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 167 (284)
T cd05079 88 EFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYT 167 (284)
T ss_pred EccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccccCcccee
Confidence 9999999977663 22 356777777777666666666665321
Q ss_pred ----ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCC----------CCCcHHHHHHHHhhcC-CC
Q 007935 467 ----SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEN----------DGKGLESLVRKAFRER-RP 531 (584)
Q Consensus 467 ----~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~----------~~~~l~~~~~~~~~~~-~~ 531 (584)
..++..|+|||++.. ..++.++|||||||++|||+|++.|+..... ................ .+
T Consensus 168 ~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (284)
T cd05079 168 VKDDLDSPVFWYAPECLIQ-SKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLP 246 (284)
T ss_pred ecCCCCCCccccCHHHhcc-CCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCccCC
Confidence 234556999998554 5789999999999999999998876532111 0001111111111110 00
Q ss_pred CccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhh
Q 007935 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581 (584)
Q Consensus 532 ~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 581 (584)
.... ....+.+++.+||+.+|++|||+.++++.|+++
T Consensus 247 ~~~~-------------~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 247 RPPN-------------CPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred CCCC-------------CCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 0111 123567788899999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-27 Score=258.05 Aligned_cols=209 Identities=23% Similarity=0.340 Sum_probs=166.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
+.+||.|.||.||.|...++| ...|||-++... .....+.+.+|+.++..++|||+|+++|+-.+++..+|.||
T Consensus 1240 g~~Ig~G~fG~VYtavN~~tG-----ellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFME 1314 (1509)
T KOG4645|consen 1240 GNFIGGGTFGKVYTAVNLDTG-----ELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFME 1314 (1509)
T ss_pred ccccCCcceeeeEEeecCCcc-----chhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHH
Confidence 579999999999999998887 789999887542 23345778899999999999999999999999999999999
Q ss_pred cccCCcHHH-------------------------HHhccc--ccccCCCCccccccCeEEecCCCccc------------
Q 007935 426 FIRNGSLYA-------------------------ALHGFG--LNRLLPGTSKVTKNETIVTSGTGSRI------------ 466 (584)
Q Consensus 426 y~~~GsL~~-------------------------~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~------------ 466 (584)
||++|+|.+ +||..| |+++++.|+.+..++.++..|||+..
T Consensus 1315 yC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~e 1394 (1509)
T KOG4645|consen 1315 YCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGE 1394 (1509)
T ss_pred HhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchhcCCHH
Confidence 999999953 445544 68888899888888888888887543
Q ss_pred ---ccCCCcccCccccccC--CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhh
Q 007935 467 ---SAISNVYLAPEARIYG--SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALV 541 (584)
Q Consensus 467 ---~~gt~~y~aPE~~~~~--~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~ 541 (584)
..||+.|||||++... ....-+.||||+|||++||+||++||...+.+ +..+..-.....+++++.++++-.
T Consensus 1395 l~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne---~aIMy~V~~gh~Pq~P~~ls~~g~ 1471 (1509)
T KOG4645|consen 1395 LQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE---WAIMYHVAAGHKPQIPERLSSEGR 1471 (1509)
T ss_pred HHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch---hHHHhHHhccCCCCCchhhhHhHH
Confidence 3699999999995432 23456899999999999999999999864433 444444445555666666666655
Q ss_pred hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 542 KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 542 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+++ ..|++.||++|.++.|+++
T Consensus 1472 dFl-------------e~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1472 DFL-------------EHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred HHH-------------HHHHhcCchhhhHHHHHHH
Confidence 544 4499999999999988775
|
|
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.7e-26 Score=223.75 Aligned_cols=208 Identities=20% Similarity=0.281 Sum_probs=153.2
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeecc
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 427 (584)
+.||+|+||.||+|.....+ ..+|+|.+.... ....+.|.+|++++++++||||+++++++..++..++||||+
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~-----~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~ 84 (282)
T cd06643 11 GELGDGAFGKVYKAQNKETG-----VLAAAKVIDTKS-EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC 84 (282)
T ss_pred hhcccCCCeEEEEEEECCCC-----eEEEEEEeCCCC-HHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEec
Confidence 56999999999999987765 789999987643 334578999999999999999999999999999999999999
Q ss_pred cCCcHHHHHh--------------------------ccc--ccccCCCCccccccCeEEecCCCcc-----------ccc
Q 007935 428 RNGSLYAALH--------------------------GFG--LNRLLPGTSKVTKNETIVTSGTGSR-----------ISA 468 (584)
Q Consensus 428 ~~GsL~~~L~--------------------------~~g--~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~~ 468 (584)
++|+|..+++ +.| |+++.+.|+.+..++.++..+++.. ...
T Consensus 85 ~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 164 (282)
T cd06643 85 AGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI 164 (282)
T ss_pred CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccccccccccccccccccc
Confidence 9999966553 333 5667777777766666777666532 135
Q ss_pred CCCcccCccccc----cCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhh
Q 007935 469 ISNVYLAPEARI----YGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEI 544 (584)
Q Consensus 469 gt~~y~aPE~~~----~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~ 544 (584)
++..|+|||++. .+..++.++|||||||++|||++|+.||.... .............+ ....+..
T Consensus 165 ~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~-----~~~~~~~~~~~~~~--~~~~~~~---- 233 (282)
T cd06643 165 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELN-----PMRVLLKIAKSEPP--TLAQPSR---- 233 (282)
T ss_pred ccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccC-----HHHHHHHHhhcCCC--CCCCccc----
Confidence 788899999853 23457889999999999999999999987422 11122222211111 1111100
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
....+.+++.+||+.||.+||++.++++
T Consensus 234 ----~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 234 ----WSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred ----cCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0124556888899999999999999875
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.2e-26 Score=233.11 Aligned_cols=157 Identities=21% Similarity=0.316 Sum_probs=126.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC------Cc
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN------DE 419 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~------~~ 419 (584)
.+.||+|+||.||++.....+ +.||||++.... .....+.+.+|+.+++.++||||+++++++... ..
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~ 103 (364)
T cd07875 29 LKPIGSGAQGIVCAAYDAILE-----RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 103 (364)
T ss_pred EEEeecCCCeEEEEEEECCCC-----cEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccCe
Confidence 467999999999999987665 789999997642 233346788999999999999999999988653 35
Q ss_pred eeEeeecccCCcHH-----------------------HHHhccc--ccccCCCCccccccCeEEecCCCccc--------
Q 007935 420 KLLISDFIRNGSLY-----------------------AALHGFG--LNRLLPGTSKVTKNETIVTSGTGSRI-------- 466 (584)
Q Consensus 420 ~~lV~Ey~~~GsL~-----------------------~~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~-------- 466 (584)
.++||||+++ +|. ++||..| |+++++.|+.+..++.++..++|...
T Consensus 104 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~ 182 (364)
T cd07875 104 VYIVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 182 (364)
T ss_pred EEEEEeCCCC-CHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccCCCCcc
Confidence 7999999976 453 3455544 67788888888777777777776432
Q ss_pred --ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCC
Q 007935 467 --SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAG 510 (584)
Q Consensus 467 --~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~ 510 (584)
..||..|+|||++. +..++.++|||||||++|||++|+.||.+
T Consensus 183 ~~~~~t~~y~aPE~~~-~~~~~~~~DiwSlG~il~ell~g~~pf~~ 227 (364)
T cd07875 183 TPYVVTRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMIKGGVLFPG 227 (364)
T ss_pred cCCcccCCcCCHHHHh-CCCCCchhhHHhHHHHHHHHHhCCCCCCC
Confidence 36788999999954 46899999999999999999999999975
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.9e-26 Score=231.62 Aligned_cols=159 Identities=19% Similarity=0.316 Sum_probs=120.1
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEe--CCceeEe
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYA--NDEKLLI 423 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~--~~~~~lV 423 (584)
.+..||+|+||.||+|+..++. ....||+|.+..... ...+.+|++++++++|||||++++++.. +...++|
T Consensus 5 ~g~~lG~G~~g~Vy~~~~~~~~---~~~~~a~k~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv 78 (317)
T cd07867 5 EGCKVGRGTYGHVYKAKRKDGK---DEKEYALKQIEGTGI---SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLL 78 (317)
T ss_pred eceEeccCCCeeEEEEEecCCC---ccceEEEEEecCCCC---cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEE
Confidence 3467999999999999976532 126899999875422 2568899999999999999999999864 4568999
Q ss_pred eecccCCcHHH----------------------------------HHhccc--ccccCCCCcccc----ccCeEEecCCC
Q 007935 424 SDFIRNGSLYA----------------------------------ALHGFG--LNRLLPGTSKVT----KNETIVTSGTG 463 (584)
Q Consensus 424 ~Ey~~~GsL~~----------------------------------~L~~~g--~~~~~~~~~~i~----~~~~~~~~~~~ 463 (584)
|||+++ +|.+ |||+.| |+++++.|+.+. .+..++..++|
T Consensus 79 ~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG 157 (317)
T cd07867 79 FDYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMG 157 (317)
T ss_pred EeeeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeecc
Confidence 999875 4433 344443 567777776662 23456666665
Q ss_pred ccc--------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCC
Q 007935 464 SRI--------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGP 511 (584)
Q Consensus 464 ~~~--------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~ 511 (584)
... ..||..|+|||++.....++.++|||||||++|||+||+.||...
T Consensus 158 ~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 158 FARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred ceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 321 256888999998655456899999999999999999999999753
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-25 Score=219.59 Aligned_cols=211 Identities=29% Similarity=0.419 Sum_probs=158.7
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeecc
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 427 (584)
+.||+|+||.||+|...... .....||+|.++........+.+.+|++++.+++|+||+++++++.+.+..++||||+
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 78 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKD--GKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYM 78 (262)
T ss_pred CccccCCceEEEEEEEecCC--CCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEec
Confidence 36999999999999987641 1117899999987644434588999999999999999999999999999999999999
Q ss_pred cCCcHHHHHhcc------------------------------------cccccCCCCccccccCeEEecCCCccc-----
Q 007935 428 RNGSLYAALHGF------------------------------------GLNRLLPGTSKVTKNETIVTSGTGSRI----- 466 (584)
Q Consensus 428 ~~GsL~~~L~~~------------------------------------g~~~~~~~~~~i~~~~~~~~~~~~~~~----- 466 (584)
++|+|.+++... .|+++.+.|+.+..+...+..+++...
T Consensus 79 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~ 158 (262)
T cd00192 79 EGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDD 158 (262)
T ss_pred cCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccccc
Confidence 999998887542 245666777777666677776665322
Q ss_pred --------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhc-CCCCcccc
Q 007935 467 --------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRE-RRPLSEVI 536 (584)
Q Consensus 467 --------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~ 536 (584)
..++..|+|||.+.. ..++.++||||+||++|||++ |+.||.... ........... ....+..+
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~ 232 (262)
T cd00192 159 DYYRKKTGGKLPIRWMAPESLKD-GIFTSKSDVWSFGVLLWEIFTLGATPYPGLS-----NEEVLEYLRKGYRLPKPEYC 232 (262)
T ss_pred cccccccCCCcCccccCHHHhcc-CCcchhhccHHHHHHHHHHHhcCCCCCCCCC-----HHHHHHHHHcCCCCCCCccC
Confidence 245678999998554 578999999999999999999 699987532 22222222221 11112222
Q ss_pred ChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHH
Q 007935 537 DPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579 (584)
Q Consensus 537 d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~ 579 (584)
+ .++.+++.+||+.+|++|||+.|+++.|+
T Consensus 233 ~-------------~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 233 P-------------DELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred C-------------hHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 2 24556778899999999999999998874
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-25 Score=224.85 Aligned_cols=205 Identities=17% Similarity=0.272 Sum_probs=152.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||.|++|.||+|.....+ +.||+|.+..... ...+.+.+|++++++++||||+++++++...+..++||||
T Consensus 24 ~~~lg~g~~g~vy~~~~~~~~-----~~v~iK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 97 (296)
T cd06655 24 YEKIGQGASGTVFTAIDVATG-----QEVAIKQINLQKQ-PKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEY 97 (296)
T ss_pred EEEEecCCCeEEEEEEEcCCC-----cEEEEEEEecccC-chHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEe
Confidence 356999999999999876655 7999999976433 2347889999999999999999999999999999999999
Q ss_pred ccCCcHHHHHh------------------------cc--cccccCCCCccccccCeEEecCCCcc-----------cccC
Q 007935 427 IRNGSLYAALH------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR-----------ISAI 469 (584)
Q Consensus 427 ~~~GsL~~~L~------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~~g 469 (584)
+++|+|.+++. +. .|+++.+.|+.+..++..+..+++.. ...+
T Consensus 98 ~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 177 (296)
T cd06655 98 LAGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRSTMVG 177 (296)
T ss_pred cCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhcccccccCCCcCC
Confidence 99999965543 33 35666777777766666777666532 1357
Q ss_pred CCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC-C--CccccChhhhhhhhH
Q 007935 470 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR-P--LSEVIDPALVKEIHA 546 (584)
Q Consensus 470 t~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~-~--~~~~~d~~~~~~~~~ 546 (584)
+..|+|||.+.. ..++.++|||||||++|||++|+.||..... .... ........ . ....+++
T Consensus 178 ~~~y~aPE~~~~-~~~~~~~Dv~slGvil~~lltg~~pf~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~-------- 243 (296)
T cd06655 178 TPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMVEGEPPYLNENP----LRAL-YLIATNGTPELQNPEKLSP-------- 243 (296)
T ss_pred CccccCcchhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----HHHH-HHHHhcCCcccCCcccCCH--------
Confidence 788999998544 6789999999999999999999999975322 1111 11111111 1 1111222
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 547 KRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 547 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||..||++|||+.++++
T Consensus 244 -----~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 244 -----IFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred -----HHHHHHHHHhhcChhhCCCHHHHhh
Confidence 3445777899999999999999984
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.5e-26 Score=227.75 Aligned_cols=221 Identities=14% Similarity=0.188 Sum_probs=152.7
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeecc
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 427 (584)
+.||+|+||.||+|+...++ ..||+|.++..........+.+|+.++++++||||+++++++.+++..++||||+
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~~ 86 (301)
T cd07873 12 DKLGEGTYATVYKGRSKLTD-----NLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYL 86 (301)
T ss_pred eEeccCcCEEEEEEEEcCCC-----cEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEecc
Confidence 56999999999999987655 7899999976543333467889999999999999999999999999999999999
Q ss_pred cCCcHHHHHh--------------------------ccc--ccccCCCCccccccCeEEecCCCccc-----------cc
Q 007935 428 RNGSLYAALH--------------------------GFG--LNRLLPGTSKVTKNETIVTSGTGSRI-----------SA 468 (584)
Q Consensus 428 ~~GsL~~~L~--------------------------~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~-----------~~ 468 (584)
+ ++|.++++ +.| |.++.++|+.+..+..++..++|... ..
T Consensus 87 ~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 165 (301)
T cd07873 87 D-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEV 165 (301)
T ss_pred c-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCcccccc
Confidence 7 57765553 223 46666677767666677777765321 24
Q ss_pred CCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcC--CCCccccC---------
Q 007935 469 ISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER--RPLSEVID--------- 537 (584)
Q Consensus 469 gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~d--------- 537 (584)
++..|+|||++.....++.++|||||||++|||+||+.||...... .....+....... .......+
T Consensus 166 ~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (301)
T cd07873 166 VTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVE--EQLHFIFRILGTPTEETWPGILSNEEFKSYNY 243 (301)
T ss_pred eeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHcCCCChhhchhhhcccccccccc
Confidence 5778999998655456889999999999999999999999753221 1111111111000 00000000
Q ss_pred hhhhh-hh--hHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 538 PALVK-EI--HAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 538 ~~~~~-~~--~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+.... .. ........+.+++.+|++.||.+|||+.|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 244 PKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred CccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 00000 00 00011224567899999999999999999986
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.1e-26 Score=223.30 Aligned_cols=210 Identities=18% Similarity=0.235 Sum_probs=150.5
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeecc
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 427 (584)
+.||+|+||.||+|+....+ +.||+|.++.... ...+.+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 15 ~~lg~g~~~~v~~~~~~~~~-----~~~~ik~~~~~~~-~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 15 QRIGSGTYGDVYKARNVNTG-----ELAAIKVIKLEPG-EDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred HHhCCCCCeEEEEEEEcCCC-----cEEEEEEEecCch-hHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence 46999999999999987665 7899999876432 23367889999999999999999999999999999999999
Q ss_pred cCCcHHHHHh-------------------------ccc--ccccCCCCccccccCeEEecCCCcc-----------cccC
Q 007935 428 RNGSLYAALH-------------------------GFG--LNRLLPGTSKVTKNETIVTSGTGSR-----------ISAI 469 (584)
Q Consensus 428 ~~GsL~~~L~-------------------------~~g--~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~~g 469 (584)
++|+|.++++ +.| |+++.+.|+.+..+..++..++|.. ...|
T Consensus 89 ~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 168 (267)
T cd06645 89 GGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSFIG 168 (267)
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCcccccccccC
Confidence 9999976653 223 4566666666665566666665532 2357
Q ss_pred CCcccCccccc--cCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHH
Q 007935 470 SNVYLAPEARI--YGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAK 547 (584)
Q Consensus 470 t~~y~aPE~~~--~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 547 (584)
+..|+|||++. ....++.++|||||||++|||++|+.||...... ...... ...... +.......
T Consensus 169 ~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~----~~~~~~-~~~~~~-~~~~~~~~------- 235 (267)
T cd06645 169 TPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPM----RALFLM-TKSNFQ-PPKLKDKM------- 235 (267)
T ss_pred cccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccch----hhHHhh-hccCCC-CCcccccC-------
Confidence 88999999853 2346889999999999999999999998643211 111111 111110 01110000
Q ss_pred HHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 548 RQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 548 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.....+.+++.+|++.+|++||+++++++
T Consensus 236 ~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 236 KWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred CCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 00123456888899999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.5e-26 Score=226.59 Aligned_cols=223 Identities=14% Similarity=0.188 Sum_probs=152.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|++|.||+|....++ +.||||.+...........+.+|++++++++||||+++++++.+++..++||||
T Consensus 10 ~~~lg~g~~~~vy~~~~~~~~-----~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 10 LDKLGEGSYATVYKGRSKLTG-----QLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred EEEEeecCCeEEEEEEEcCCC-----cEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 357999999999999987655 789999997653333335678999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc-----------c
Q 007935 427 IRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI-----------S 467 (584)
Q Consensus 427 ~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~-----------~ 467 (584)
+++ +|.+++.. . -|+++.+.|+.+..++.++..+++... .
T Consensus 85 ~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 163 (291)
T cd07844 85 LDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTYSNE 163 (291)
T ss_pred CCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCCcccccc
Confidence 985 88766542 2 245556666666666666776665321 2
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC----------------C
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR----------------P 531 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~----------------~ 531 (584)
.++..|+|||++.....++.++||||+||++|||++|+.||.........+.... ....... .
T Consensus 164 ~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 242 (291)
T cd07844 164 VVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIF-RVLGTPTEETWPGVSSNPEFKPYS 242 (291)
T ss_pred ccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHH-HhcCCCChhhhhhhhhcccccccc
Confidence 3567899999865445688999999999999999999999975331111111110 0000000 0
Q ss_pred CccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 532 ~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
........+............+.+++.+|++.+|++|||+.|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 243 FPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred ccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 000000111110001111245678999999999999999999875
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.8e-28 Score=221.06 Aligned_cols=205 Identities=16% Similarity=0.269 Sum_probs=160.3
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeecc
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 427 (584)
..+|+|+||.|||+.++..| +.||||++.... ..+++..|+.+|.+.+.|++|++||.|......++|||||
T Consensus 39 ~KLGEGSYGSV~KAIH~EsG-----~v~AIK~VPV~s---DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYC 110 (502)
T KOG0574|consen 39 GKLGEGSYGSVHKAIHRESG-----HVLAIKKVPVDT---DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYC 110 (502)
T ss_pred HHhcCCcchHHHHHHHhccC-----cEEEEEecCccc---hHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhc
Confidence 46999999999999998877 899999987632 2478999999999999999999999999999999999999
Q ss_pred cCCcHHHHH--------------------------hc--ccccccCCCCccccccCeEEecCCCcc-----------ccc
Q 007935 428 RNGSLYAAL--------------------------HG--FGLNRLLPGTSKVTKNETIVTSGTGSR-----------ISA 468 (584)
Q Consensus 428 ~~GsL~~~L--------------------------~~--~g~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~~ 468 (584)
-.|+..+.+ |. ..|++++++|+.+..++..+..+||.. ...
T Consensus 111 GAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTVI 190 (502)
T KOG0574|consen 111 GAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVI 190 (502)
T ss_pred CCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCccc
Confidence 999985444 32 368899999988888887777777632 358
Q ss_pred CCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHH
Q 007935 469 ISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKR 548 (584)
Q Consensus 469 gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 548 (584)
||+.|||||++.. -.|++++||||+|++..||..|++||.+...- ..++ .....++ +..-.|+.
T Consensus 191 GTPFWMAPEVI~E-IGY~~~ADIWSLGITaIEMAEG~PPYsDIHPM----RAIF--MIPT~PP-PTF~KPE~-------- 254 (502)
T KOG0574|consen 191 GTPFWMAPEVIEE-IGYDTKADIWSLGITAIEMAEGRPPYSDIHPM----RAIF--MIPTKPP-PTFKKPEE-------- 254 (502)
T ss_pred cCcccccHHHHHH-hccchhhhHhhhcchhhhhhcCCCCccccccc----ceeE--eccCCCC-CCCCChHh--------
Confidence 9999999999665 67999999999999999999999999864331 1100 0111111 12222222
Q ss_pred HHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 549 QVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 549 ~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
-..++-+++..|+-++|++|-|+.++++
T Consensus 255 WS~~F~DFi~~CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 255 WSSEFNDFIRSCLIKKPEERKTALRLCE 282 (502)
T ss_pred hhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence 2234566888899999999999998875
|
|
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-25 Score=223.60 Aligned_cols=220 Identities=18% Similarity=0.212 Sum_probs=150.6
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
+.||+|++|.||+|+...++ ..||||+++... .....+.+.+|+.++++++||||+++++++.+++..++||||
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 6 EKIGEGTYGVVYKGRNKKTG-----QIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred eEecccCceEEEEEEECCCC-----cEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 56999999999999987665 799999987542 222336788999999999999999999999999999999999
Q ss_pred ccCCcHHHHHh----------------------------ccc--ccccCCCCccccccCeEEecCCCccc----------
Q 007935 427 IRNGSLYAALH----------------------------GFG--LNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 427 ~~~GsL~~~L~----------------------------~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
++ |+|.++++ +.| |.++.+.|+.+..++.++..+++...
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 159 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYT 159 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCccccc
Confidence 97 57765543 333 45566666666666777777766332
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcC-------C-------C
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER-------R-------P 531 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~-------~-------~ 531 (584)
..++..|+|||++.....++.++|||||||++|||+||+.||.+..... ......+...... . .
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (285)
T cd07861 160 HEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEID-QLFRIFRILGTPTEDVWPGVTSLPDYKNT 238 (285)
T ss_pred CCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHhCCCChhhhhcchhhHHHHhh
Confidence 2457789999986554567899999999999999999999997532110 0111111000000 0 0
Q ss_pred CccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 532 ~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
............ ......++.+++.+||+.||++|||+.+|+.
T Consensus 239 ~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 239 FPKWKKGSLRSA--VKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred ccccCcchhHHh--cCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 000000000000 0001235567899999999999999999874
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2e-26 Score=226.20 Aligned_cols=206 Identities=19% Similarity=0.215 Sum_probs=161.1
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcc-hhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-WRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~-~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
+.||+|.|.+|-.|++.=+| ..||||++.+..-+ .....+.+|+..|+-++|||||+||++.......|||+|+
T Consensus 24 kTlG~GHFAVVKLArHVFTG-----ekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLEL 98 (864)
T KOG4717|consen 24 KTLGRGHFAVVKLARHVFTG-----EKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILEL 98 (864)
T ss_pred hhhcCCceehhhhhhhhccc-----ceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEe
Confidence 46999999999999887666 89999999876322 2335688999999999999999999999999999999999
Q ss_pred ccCCcHHHHHh--cc--------------------------cccccCCCCcccccc-CeEEecCCCc----------ccc
Q 007935 427 IRNGSLYAALH--GF--------------------------GLNRLLPGTSKVTKN-ETIVTSGTGS----------RIS 467 (584)
Q Consensus 427 ~~~GsL~~~L~--~~--------------------------g~~~~~~~~~~i~~~-~~~~~~~~~~----------~~~ 467 (584)
-++|+|++|+- +. .|++++++|..+... +-++..+||. ...
T Consensus 99 GD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~Ts 178 (864)
T KOG4717|consen 99 GDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLTTS 178 (864)
T ss_pred cCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCCcchhhcc
Confidence 99999999983 22 467888887643332 4555556553 246
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHH
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAK 547 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 547 (584)
+|+..|-|||+++......+++||||+||+||-|+.|+.||+.....+ ....++.-++.++..++.+..+.+.
T Consensus 179 CGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSE-----TLTmImDCKYtvPshvS~eCrdLI~-- 251 (864)
T KOG4717|consen 179 CGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSE-----TLTMIMDCKYTVPSHVSKECRDLIQ-- 251 (864)
T ss_pred cchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchh-----hhhhhhcccccCchhhhHHHHHHHH--
Confidence 899999999997765444589999999999999999999998654332 2333444555666667666655444
Q ss_pred HHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 548 RQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 548 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.|+..||++|.+.+||+.
T Consensus 252 -----------sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 252 -----------SMLVRDPKKRASLEEIVS 269 (864)
T ss_pred -----------HHHhcCchhhccHHHHhc
Confidence 499999999999999974
|
|
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.6e-26 Score=233.87 Aligned_cols=208 Identities=17% Similarity=0.226 Sum_probs=152.1
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+++...++ +.||+|.+.... .....+.+.+|+.+++.++||||+++++++.+++..++||
T Consensus 48 ~~~lG~G~fg~Vy~~~~~~~~-----~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~ 122 (371)
T cd05622 48 VKVIGRGAFGEVQLVRHKSTR-----KVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVM 122 (371)
T ss_pred EEEEeecCCeEEEEEEECCCC-----cEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 468999999999999998776 899999986531 2223356889999999999999999999999999999999
Q ss_pred ecccCCcHHHHH------------------------hcc--cccccCCCCccccccCeEEecCCCcc------------c
Q 007935 425 DFIRNGSLYAAL------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSR------------I 466 (584)
Q Consensus 425 Ey~~~GsL~~~L------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~------------~ 466 (584)
||+++|+|.+++ |+. -|+++++.|+.+..++.++..++|.. .
T Consensus 123 Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~~~~~ 202 (371)
T cd05622 123 EYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT 202 (371)
T ss_pred cCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCcccccC
Confidence 999999996555 333 36778888888877777777777632 2
Q ss_pred ccCCCcccCccccccC---CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC--Ccc--ccChh
Q 007935 467 SAISNVYLAPEARIYG---SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP--LSE--VIDPA 539 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~---~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~--~~~--~~d~~ 539 (584)
..||+.|||||++... ..++.++|||||||++|||++|+.||... ............... ++. .+++
T Consensus 203 ~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~-----~~~~~~~~i~~~~~~~~~~~~~~~s~- 276 (371)
T cd05622 203 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD-----SLVGTYSKIMNHKNSLTFPDDNDISK- 276 (371)
T ss_pred cccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCC-----CHHHHHHHHHcCCCcccCCCcCCCCH-
Confidence 3589999999986432 23789999999999999999999999742 222333333322211 111 1222
Q ss_pred hhhhhhHHHHHHHHHHHHhcccCCCCCC--CCChHHHHHH
Q 007935 540 LVKEIHAKRQVLATFHIALNCTELDPEF--RPRMRTVSES 577 (584)
Q Consensus 540 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~--RPt~~ev~~~ 577 (584)
.+.+++..|+..++.+ ||++.|+.+.
T Consensus 277 ------------~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 277 ------------EAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred ------------HHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 2334666688744433 7888888763
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.8e-26 Score=220.63 Aligned_cols=209 Identities=23% Similarity=0.333 Sum_probs=151.4
Q ss_pred eceeecCceEEEEEecCCCC-----CCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEe
Q 007935 349 VVGKSKNGIMYKVVVGRGSG-----MGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLI 423 (584)
Q Consensus 349 ~iG~G~~g~Vy~~~~~~~~~-----~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV 423 (584)
.||+|+||.||+|.....+. ......|++|.+...... .+.|.+|+.++++++||||+++++++.. +..++|
T Consensus 2 ~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 2 HLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD--SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred cccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh--HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence 68999999999999977541 222246888887654332 4789999999999999999999999988 888999
Q ss_pred eecccCCcHHHHHhc--------------------------c--cccccCCCCccccccC-------eEEecCCCccc--
Q 007935 424 SDFIRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNE-------TIVTSGTGSRI-- 466 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~-------~~~~~~~~~~~-- 466 (584)
|||+++|+|.++++. . -|+++.+.|+.+..+. .++..+++...
T Consensus 79 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~ 158 (259)
T cd05037 79 EEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITV 158 (259)
T ss_pred EEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCccccc
Confidence 999999999766642 2 2567777777666554 46666666433
Q ss_pred -----ccCCCcccCccccccC-CCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChh
Q 007935 467 -----SAISNVYLAPEARIYG-SKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPA 539 (584)
Q Consensus 467 -----~~gt~~y~aPE~~~~~-~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~ 539 (584)
..++..|+|||++... ..++.++|||||||++|||++ |..||...... ....... .....+. +.
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~--~~~~~~~----~~~~~~~---~~ 229 (259)
T cd05037 159 LSREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS--EKERFYQ----DQHRLPM---PD 229 (259)
T ss_pred ccccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch--hHHHHHh----cCCCCCC---CC
Confidence 2466789999996543 368999999999999999999 57777643211 1111111 1111110 00
Q ss_pred hhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHH
Q 007935 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579 (584)
Q Consensus 540 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~ 579 (584)
. ..+.+++.+||+.+|.+|||+.||++.|+
T Consensus 230 ~----------~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 230 C----------AELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred c----------hHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 0 35667888999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2e-25 Score=221.68 Aligned_cols=222 Identities=23% Similarity=0.316 Sum_probs=153.1
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC--CceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN--DEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~--~~~~lV~ 424 (584)
.+.||+|+||.||++....-. ......||+|++.... ....+.|.+|++++++++|||||++++++... ...++||
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~~-~~~~~~v~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 86 (284)
T cd05081 9 IQQLGKGNFGSVELCRYDPLQ-DNTGEVVAVKKLQHST-AEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVM 86 (284)
T ss_pred eeeccCCCCceEEEEEecCCc-CCCCcEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEEEE
Confidence 457999999999999864211 1112789999987643 33347899999999999999999999988653 4688999
Q ss_pred ecccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCcccc---------
Q 007935 425 DFIRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRIS--------- 467 (584)
Q Consensus 425 Ey~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~~--------- 467 (584)
||+++|+|.++++. . -|+++.+.|+.+..+...+..+++....
T Consensus 87 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~ 166 (284)
T cd05081 87 EYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYK 166 (284)
T ss_pred EecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccccCCCccee
Confidence 99999999877742 2 2466777777776667677777654321
Q ss_pred -----cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCC----------CcHHHHHHHHhhcCCCC
Q 007935 468 -----AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDG----------KGLESLVRKAFRERRPL 532 (584)
Q Consensus 468 -----~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~----------~~l~~~~~~~~~~~~~~ 532 (584)
.++..|+|||++. +..++.++|||||||++|||++|..|+....... .................
T Consensus 167 ~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (284)
T cd05081 167 VREPGESPIFWYAPESLT-ESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRL 245 (284)
T ss_pred ecCCCCCceEeeCHHHhc-cCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcCCcC
Confidence 1233599999854 4678999999999999999999987754321110 00000000001110000
Q ss_pred ccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 533 SEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 533 ~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
+ .. ......+.+++.+||+.+|++||||.||++.|++++
T Consensus 246 ~--~~---------~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~~ 284 (284)
T cd05081 246 P--AP---------PGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAIR 284 (284)
T ss_pred C--CC---------CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhcC
Confidence 0 00 011235677889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-25 Score=221.21 Aligned_cols=214 Identities=22% Similarity=0.356 Sum_probs=156.8
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeecc
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 427 (584)
..||+|+||.||+|+..........+.||+|.+.........++|.+|++++++++||||+++++++.+.+..++||||+
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 90 (275)
T cd05046 11 TTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYMILEYT 90 (275)
T ss_pred eeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcceEEEEec
Confidence 46999999999999987655445557899999876544334578999999999999999999999999999999999999
Q ss_pred cCCcHHHHHhcc------------------------------------cccccCCCCccccccCeEEecCCCcc------
Q 007935 428 RNGSLYAALHGF------------------------------------GLNRLLPGTSKVTKNETIVTSGTGSR------ 465 (584)
Q Consensus 428 ~~GsL~~~L~~~------------------------------------g~~~~~~~~~~i~~~~~~~~~~~~~~------ 465 (584)
++|+|.++++.. -|+++.+.|..+..++..+..+++..
T Consensus 91 ~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~ 170 (275)
T cd05046 91 DLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNS 170 (275)
T ss_pred CCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEcccccccccCcc
Confidence 999998877531 24566666666655555555444321
Q ss_pred ------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCC--CCcccc
Q 007935 466 ------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERR--PLSEVI 536 (584)
Q Consensus 466 ------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~ 536 (584)
...++..|+|||.+.. ..++.++|||||||++|||++ |..||..... ............ +....+
T Consensus 171 ~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 244 (275)
T cd05046 171 EYYKLRNALIPLRWLAPEAVQE-DDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD-----EEVLNRLQAGKLELPVPEGC 244 (275)
T ss_pred cccccCCceeEEeecChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCccccch-----HHHHHHHHcCCcCCCCCCCC
Confidence 1234566999998554 568899999999999999999 7888864221 122222221111 111112
Q ss_pred ChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHh
Q 007935 537 DPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580 (584)
Q Consensus 537 d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 580 (584)
+ ..+.+++.+||+.+|++|||+.|++++|.+
T Consensus 245 ~-------------~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~ 275 (275)
T cd05046 245 P-------------SRLYKLMTRCWAVNPKDRPSFSELVSALGE 275 (275)
T ss_pred C-------------HHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence 2 245568888999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.3e-26 Score=225.12 Aligned_cols=210 Identities=20% Similarity=0.297 Sum_probs=152.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||++.....+ ..||+|.++........+.|.+|++++++++||||+++++++..++..++||||
T Consensus 6 ~~~ig~g~~g~v~~~~~~~~~-----~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 6 LDELGKGNYGSVYKVLHRPTG-----VTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred hhhhcccCCeEEEEEEEcCCC-----cEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 356999999999999987655 799999987643334447899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc-------------------------------ccccccCCCCccccccCeEEecCCCccc---------
Q 007935 427 IRNGSLYAALHG-------------------------------FGLNRLLPGTSKVTKNETIVTSGTGSRI--------- 466 (584)
Q Consensus 427 ~~~GsL~~~L~~-------------------------------~g~~~~~~~~~~i~~~~~~~~~~~~~~~--------- 466 (584)
+++++|..+++. .-|+++.+.|+.+..++.++..++|...
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 160 (286)
T cd06622 81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKT 160 (286)
T ss_pred cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCcccc
Confidence 999999766543 1245555556556555666666665332
Q ss_pred ccCCCcccCccccccC-----CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcC-CCCccccChhh
Q 007935 467 SAISNVYLAPEARIYG-----SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER-RPLSEVIDPAL 540 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~-----~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~d~~~ 540 (584)
..++..|+|||++..+ ..++.++|||||||++|||+||+.||..... .............. ..++..+++
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-- 236 (286)
T cd06622 161 NIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETY--ANIFAQLSAIVDGDPPTLPSGYSD-- 236 (286)
T ss_pred CCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcch--hhHHHHHHHHhhcCCCCCCcccCH--
Confidence 3467789999985332 2358899999999999999999999964321 11112222222111 112222222
Q ss_pred hhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 541 VKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 541 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||+.+|++||++.+++.
T Consensus 237 -----------~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 237 -----------DAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred -----------HHHHHHHHHcccCcccCCCHHHHhc
Confidence 3345777899999999999999986
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.3e-25 Score=217.71 Aligned_cols=207 Identities=21% Similarity=0.273 Sum_probs=154.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.++||+|+||.||.++....+ ..|++|.+.... .....+++.+|++++++++|+||+++++++.+.+..++|||
T Consensus 5 ~~~ig~g~~g~v~~~~~~~~~-----~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e 79 (256)
T cd08221 5 IRVLGKGAFGEATLYRRTEDD-----SLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEME 79 (256)
T ss_pred eeEecccCCceEEEEEEcCCC-----cEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEE
Confidence 467999999999999987765 789999987542 33445779999999999999999999999999999999999
Q ss_pred cccCCcHHHHHhc---------------------------cc--ccccCCCCccccccCeEEecCCCcc-----------
Q 007935 426 FIRNGSLYAALHG---------------------------FG--LNRLLPGTSKVTKNETIVTSGTGSR----------- 465 (584)
Q Consensus 426 y~~~GsL~~~L~~---------------------------~g--~~~~~~~~~~i~~~~~~~~~~~~~~----------- 465 (584)
|+++|+|.+++.. .| |.++.+.|+.+..+..++..+++..
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~ 159 (256)
T cd08221 80 YANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAE 159 (256)
T ss_pred ecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEccccccccc
Confidence 9999999877743 12 4555666666666666666665422
Q ss_pred cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC-CccccChhhhhhh
Q 007935 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP-LSEVIDPALVKEI 544 (584)
Q Consensus 466 ~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~d~~~~~~~ 544 (584)
...++..|+|||+.. +..++.++||||||+++|||++|+.||... ...+........... ....++
T Consensus 160 ~~~~~~~y~ape~~~-~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~------- 226 (256)
T cd08221 160 TVVGTPYYMSPELCQ-GVKYNFKSDIWALGCVLYELLTLKRTFDAT-----NPLNLVVKIVQGNYTPVVSVYS------- 226 (256)
T ss_pred ccCCCccccCHhhcC-CCCCCCcchhHHHHHHHHHHHHCCCCCCCC-----CHHHHHHHHHcCCCCCCccccC-------
Confidence 235788999999854 457889999999999999999999998642 222333333222211 111112
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChHHHHHH
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSES 577 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 577 (584)
..+.+++.+||+.+|++||++.|+++.
T Consensus 227 ------~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 227 ------SELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred ------HHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 235567788999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.3e-27 Score=221.20 Aligned_cols=221 Identities=17% Similarity=0.230 Sum_probs=157.7
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCC-CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEe-----CCcee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARVQHPNIVRLKAFYYA-----NDEKL 421 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~-----~~~~~ 421 (584)
+.||+|+||.|.++....++ ..||||++... ...-..++-.||+++|+.++|+|||.+++.+.. -+..|
T Consensus 28 ~~iG~GAyGvVcsA~~~~t~-----~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvY 102 (359)
T KOG0660|consen 28 EPIGRGAYGVVCSAKDKRTG-----EKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVY 102 (359)
T ss_pred ccccCcceeeEEEEEEcCCC-----CEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeE
Confidence 46999999999999998887 89999999854 333345788999999999999999999999876 34689
Q ss_pred EeeecccCCcHHHHHh-------------------------c--ccccccCCCCccccccCeEEecCCCccc--------
Q 007935 422 LISDFIRNGSLYAALH-------------------------G--FGLNRLLPGTSKVTKNETIVTSGTGSRI-------- 466 (584)
Q Consensus 422 lV~Ey~~~GsL~~~L~-------------------------~--~g~~~~~~~~~~i~~~~~~~~~~~~~~~-------- 466 (584)
+|+|+|+. +|...++ . ..|+|+++.|..+..+-..++.+||.+.
T Consensus 103 iV~elMet-DL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~ 181 (359)
T KOG0660|consen 103 LVFELMET-DLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFED 181 (359)
T ss_pred EehhHHhh-HHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeeccccCcc
Confidence 99999954 6654443 2 2579999999888888777887776432
Q ss_pred -----ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC--CCccccChh
Q 007935 467 -----SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR--PLSEVIDPA 539 (584)
Q Consensus 467 -----~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~d~~ 539 (584)
.+.|.+|.|||++.....||.+.||||.||++.||++|++-|.+.+.- .-...+........ .+..+-++.
T Consensus 182 ~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v--~Ql~lI~~~lGtP~~e~l~~i~s~~ 259 (359)
T KOG0660|consen 182 GFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYV--HQLQLILELLGTPSEEDLQKIRSEK 259 (359)
T ss_pred cchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchH--HHHHHHHHhcCCCCHHHHHHhccHH
Confidence 245889999999888889999999999999999999999999863221 11111111111000 000000111
Q ss_pred hhhhhhH-------------HHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 540 LVKEIHA-------------KRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 540 ~~~~~~~-------------~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
....+.. ...-...+++..++|..||.+|+|++|+++
T Consensus 260 ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~ 309 (359)
T KOG0660|consen 260 ARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALA 309 (359)
T ss_pred HHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence 1110000 001124577888899999999999999985
|
|
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-25 Score=224.33 Aligned_cols=216 Identities=22% Similarity=0.379 Sum_probs=156.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|....++.. ....||+|.+..........+|.+|+.++++++||||++++|+|... ..++++||
T Consensus 12 ~~~lg~G~~g~vy~~~~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~v~e~ 89 (303)
T cd05110 12 VKVLGSGAFGTVYKGIWVPEGET-VKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVTQL 89 (303)
T ss_pred ccccccCCCccEEEEEEecCCCc-ceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cceeeehh
Confidence 35799999999999998665422 22468999987654444445789999999999999999999998754 57799999
Q ss_pred ccCCcHHHHHh--------------------------ccc--ccccCCCCccccccCeEEecCCCccc------------
Q 007935 427 IRNGSLYAALH--------------------------GFG--LNRLLPGTSKVTKNETIVTSGTGSRI------------ 466 (584)
Q Consensus 427 ~~~GsL~~~L~--------------------------~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~------------ 466 (584)
+++|+|.++++ +.| |+++.+.|+.+..+..++..++|...
T Consensus 90 ~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~ 169 (303)
T cd05110 90 MPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNAD 169 (303)
T ss_pred cCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccccCcccccccC
Confidence 99999976654 223 56777778777666667777766432
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEI 544 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~ 544 (584)
..++..|+|||++. +..++.++|||||||++|||++ |+.||.+... .....++... ...+.+...
T Consensus 170 ~~~~~~~y~~PE~~~-~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~--~~~~~~~~~~--~~~~~~~~~-------- 236 (303)
T cd05110 170 GGKMPIKWMALECIH-YRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT--REIPDLLEKG--ERLPQPPIC-------- 236 (303)
T ss_pred CCccccccCCHHHhc-cCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHCC--CCCCCCCCC--------
Confidence 12356799999854 4678999999999999999998 8999864221 1122222111 111111111
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
...+.+++..||..+|++||+++++++.|+++.
T Consensus 237 -----~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~ 269 (303)
T cd05110 237 -----TIDVYMVMVKCWMIDADSRPKFKELAAEFSRMA 269 (303)
T ss_pred -----CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 124566888899999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-25 Score=221.29 Aligned_cols=210 Identities=23% Similarity=0.357 Sum_probs=156.7
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeecc
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 427 (584)
+.||+|++|.||++.....+ +.||+|++.........+++.+|++++++++||||+++++++...+..++|+||+
T Consensus 7 ~~ig~g~~~~v~~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (265)
T cd06605 7 GELGAGNSGVVSKVLHRPTG-----KIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM 81 (265)
T ss_pred HHhcCCCCeEEEEEEEcCCC-----cEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence 46999999999999998655 8999999987644445578999999999999999999999999999999999999
Q ss_pred cCCcHHHHHhc---------------------------cc--ccccCCCCccccccCeEEecCCCccc---------ccC
Q 007935 428 RNGSLYAALHG---------------------------FG--LNRLLPGTSKVTKNETIVTSGTGSRI---------SAI 469 (584)
Q Consensus 428 ~~GsL~~~L~~---------------------------~g--~~~~~~~~~~i~~~~~~~~~~~~~~~---------~~g 469 (584)
++++|.+++.. .| |.++.++|+.+..++.++..+++... ..+
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~ 161 (265)
T cd06605 82 DGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTFVG 161 (265)
T ss_pred CCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhcccC
Confidence 99999776642 22 34444555555555666666665322 357
Q ss_pred CCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC-Cccc-cChhhhhhhhHH
Q 007935 470 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP-LSEV-IDPALVKEIHAK 547 (584)
Q Consensus 470 t~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~-~~~~-~d~~~~~~~~~~ 547 (584)
+..|+|||++. +..++.++||||||+++|||++|+.||...........+..........+ +... +++
T Consensus 162 ~~~y~~PE~~~-~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 231 (265)
T cd06605 162 TSSYMAPERIQ-GNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSP--------- 231 (265)
T ss_pred ChhccCHHHHc-CCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCCChhhcCH---------
Confidence 78899999854 46899999999999999999999999975433223334444333332211 1111 222
Q ss_pred HHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 548 RQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 548 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++..||..+|++|||+.|++.
T Consensus 232 ----~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 232 ----DFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred ----HHHHHHHHHcCCCchhCcCHHHHhh
Confidence 3456777899999999999999975
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.6e-25 Score=221.64 Aligned_cols=208 Identities=18% Similarity=0.277 Sum_probs=153.1
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcC---CCceeeeeEEEEeCCceeEee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ---HPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~---HpnIV~l~g~~~~~~~~~lV~ 424 (584)
+.||+|+||.||+|.....+ ..||+|.++........+++.+|++++++++ |||++++++++.+++..++||
T Consensus 7 ~~l~~g~~g~v~~~~~~~~~-----~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 7 ELIGRGAYGAVYRGKHVPTG-----RVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hheeccCCceEEEEEEcCCC-----cEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 46999999999999986655 7999999876544444578999999999997 999999999999999999999
Q ss_pred ecccCCcHHHHHh------------------------ccc--ccccCCCCccccccCeEEecCCCcc-----------cc
Q 007935 425 DFIRNGSLYAALH------------------------GFG--LNRLLPGTSKVTKNETIVTSGTGSR-----------IS 467 (584)
Q Consensus 425 Ey~~~GsL~~~L~------------------------~~g--~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~ 467 (584)
||+++++|.++++ +.| |.++.+.|+.+..++.++..+++.. ..
T Consensus 82 e~~~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~ 161 (277)
T cd06917 82 EYAEGGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTF 161 (277)
T ss_pred ecCCCCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCccccccc
Confidence 9999999976653 333 4555566666666666666666522 12
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHH
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAK 547 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 547 (584)
.|+..|+|||++..+..++.++|||||||++|||++|+.||..... ........... .+......
T Consensus 162 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~-----~~~~~~~~~~~--~~~~~~~~-------- 226 (277)
T cd06917 162 VGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDA-----FRAMMLIPKSK--PPRLEDNG-------- 226 (277)
T ss_pred cCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCCh-----hhhhhccccCC--CCCCCccc--------
Confidence 5778899999866555678999999999999999999999975321 11111111111 01110000
Q ss_pred HHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 548 RQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 548 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
....+.+++.+||+.||++||++.|+++
T Consensus 227 -~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 227 -YSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred -CCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 1224567888899999999999999975
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.2e-25 Score=217.71 Aligned_cols=206 Identities=19% Similarity=0.297 Sum_probs=150.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||++.....+ ..+|||.+.... .....+.+.+|++++++++||||+++++.+..++..++|||
T Consensus 5 ~~~lg~g~~~~v~~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08220 5 IRVVGRGAFGIVHLCRRKADQ-----KLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVME 79 (256)
T ss_pred EEEecccCceEEEEEEEcCCC-----cEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEe
Confidence 467999999999999987665 899999987642 33345789999999999999999999999999999999999
Q ss_pred cccCCcHHHHHhc---------------------------cc--ccccCCCCccccccC-eEEecCCCcc----------
Q 007935 426 FIRNGSLYAALHG---------------------------FG--LNRLLPGTSKVTKNE-TIVTSGTGSR---------- 465 (584)
Q Consensus 426 y~~~GsL~~~L~~---------------------------~g--~~~~~~~~~~i~~~~-~~~~~~~~~~---------- 465 (584)
|+++++|.++++. .| |.++.+.|+.+..+. ..+..+++..
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~ 159 (256)
T cd08220 80 YAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAY 159 (256)
T ss_pred cCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcccc
Confidence 9999999877753 12 344444554444332 2344454422
Q ss_pred cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhc-CCCCccccChhhhhhh
Q 007935 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE-RRPLSEVIDPALVKEI 544 (584)
Q Consensus 466 ~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~d~~~~~~~ 544 (584)
...++..|+|||.+.. ..++.++||||||+++|||++|+.||.... ........... ..++.+.+++
T Consensus 160 ~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~------ 227 (256)
T cd08220 160 TVVGTPCYISPELCEG-KPYNQKSDIWALGCVLYELASLKRAFEAAN-----LPALVLKIMSGTFAPISDRYSP------ 227 (256)
T ss_pred ccccCCcccCchhccC-CCCCcccchHHHHHHHHHHHhCCCCcccCc-----hHHHHHHHHhcCCCCCCCCcCH------
Confidence 2356788999998554 678999999999999999999999987532 22222222222 1122222333
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||+.+|++|||+.|+++
T Consensus 228 -------~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 228 -------DLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred -------HHHHHHHHHccCChhhCCCHHHHhh
Confidence 3445777899999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.3e-25 Score=219.11 Aligned_cols=207 Identities=20% Similarity=0.297 Sum_probs=150.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcc--------hhhHhHHHHHHHHHhcCCCceeeeeEEEEeCC
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT--------WRFKDFESEVEAIARVQHPNIVRLKAFYYAND 418 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~--------~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~ 418 (584)
...||+|++|.||+|.....+ +.||+|.+...... ...+.+.+|++++++++||||+++++++.+.+
T Consensus 5 ~~~ig~g~~~~v~~a~~~~~~-----~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 79 (267)
T cd06628 5 GALIGSGSFGSVYLGMNASSG-----ELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDAD 79 (267)
T ss_pred cceeecCCCeEEEEEEecCCC-----cEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC
Confidence 457999999999999986654 78999988754221 12356889999999999999999999999999
Q ss_pred ceeEeeecccCCcHHHHHhc-------------------------cc--ccccCCCCccccccCeEEecCCCcc------
Q 007935 419 EKLLISDFIRNGSLYAALHG-------------------------FG--LNRLLPGTSKVTKNETIVTSGTGSR------ 465 (584)
Q Consensus 419 ~~~lV~Ey~~~GsL~~~L~~-------------------------~g--~~~~~~~~~~i~~~~~~~~~~~~~~------ 465 (584)
..++||||+++++|.+++.. .| |+++.+.|+.+..+...+..+++..
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd06628 80 HLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEAN 159 (267)
T ss_pred ccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCcccccc
Confidence 99999999999999766642 22 4555666666655566666665421
Q ss_pred -----------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCcc
Q 007935 466 -----------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSE 534 (584)
Q Consensus 466 -----------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 534 (584)
...|+..|+|||.+.. ..++.++|||||||++|||++|+.||..... ..............++.
T Consensus 160 ~~~~~~~~~~~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~ 234 (267)
T cd06628 160 SLSTKTNGARPSLQGSVFWMAPEVVKQ-TSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ----LQAIFKIGENASPEIPS 234 (267)
T ss_pred cccCCccccccccCCCcCccChhHhcc-CCCCchhhhHHHHHHHHHHhhCCCCCCCccH----HHHHHHHhccCCCcCCc
Confidence 1246778999998544 5788999999999999999999999975321 12111111111111222
Q ss_pred ccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 535 VIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 535 ~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.++. .+.+++.+||+.||++||++.||++
T Consensus 235 ~~~~-------------~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 235 NISS-------------EAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred ccCH-------------HHHHHHHHHccCCchhCcCHHHHhh
Confidence 2222 3455777899999999999999975
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.2e-26 Score=233.77 Aligned_cols=199 Identities=21% Similarity=0.330 Sum_probs=147.3
Q ss_pred ceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhc---CCCceeeeeEEEEeCCceeEee
Q 007935 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARV---QHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 350 iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l---~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
||+|+||+||+|+....+ +.||||++.... .......+.+|..++.+. +||||+++++++.+.+..++||
T Consensus 1 lG~G~~g~Vy~~~~~~~~-----~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~ 75 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTR-----RIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVT 75 (330)
T ss_pred CCCCCceEEEEEEECCCC-----CEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEE
Confidence 699999999999987765 799999996531 122234566777777766 6999999999999999999999
Q ss_pred ecccCCcHHHHH-------------------------hccc--ccccCCCCccccccCeEEecCCCcc-----------c
Q 007935 425 DFIRNGSLYAAL-------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSR-----------I 466 (584)
Q Consensus 425 Ey~~~GsL~~~L-------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~-----------~ 466 (584)
||+++|+|.+++ |+.| |+++++.|+.+..++.++..++|.. .
T Consensus 76 e~~~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~ 155 (330)
T cd05586 76 DYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNT 155 (330)
T ss_pred cCCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccC
Confidence 999999996554 3333 5778888887777777777777632 2
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCc-cccChhhhhhhh
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLS-EVIDPALVKEIH 545 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~d~~~~~~~~ 545 (584)
..||..|||||++.....++.++|||||||++|||+||+.||... ...............++ ..+++.
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~-----~~~~~~~~i~~~~~~~~~~~~~~~------ 224 (330)
T cd05586 156 FCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAE-----DTQQMYRNIAFGKVRFPKNVLSDE------ 224 (330)
T ss_pred ccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCC-----CHHHHHHHHHcCCCCCCCccCCHH------
Confidence 358899999998655456899999999999999999999999742 22333333332222222 122332
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCCh
Q 007935 546 AKRQVLATFHIALNCTELDPEFRPRM 571 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RPt~ 571 (584)
+.+++.+||+.||++||++
T Consensus 225 -------~~~li~~~L~~~P~~R~~~ 243 (330)
T cd05586 225 -------GRQFVKGLLNRNPQHRLGA 243 (330)
T ss_pred -------HHHHHHHHcCCCHHHCCCC
Confidence 3457777999999999854
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-25 Score=235.67 Aligned_cols=217 Identities=18% Similarity=0.173 Sum_probs=151.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||++.....+ +.||||.... ..+.+|++++++++|||||++++++...+..++||||
T Consensus 174 ~~~Lg~G~~G~Vy~a~~~~~~-----~~vavK~~~~-------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~ 241 (461)
T PHA03211 174 HRALTPGSEGCVFESSHPDYP-----QRVVVKAGWY-------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK 241 (461)
T ss_pred EEEEccCCCeEEEEEEECCCC-----CEEEEecccc-------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 468999999999999998765 7899996432 4567899999999999999999999999999999999
Q ss_pred ccCCcHHHHH--------------------------hcc--cccccCCCCccccccCeEEecCCCccc------------
Q 007935 427 IRNGSLYAAL--------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSRI------------ 466 (584)
Q Consensus 427 ~~~GsL~~~L--------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~------------ 466 (584)
+. |+|.+++ |.. .|+++++.|+.+..+..++..+||...
T Consensus 242 ~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~ 320 (461)
T PHA03211 242 YR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHY 320 (461)
T ss_pred cC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceeccccccccccc
Confidence 95 6776554 333 367788888877777777777776421
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCC---CC---cHHHHHHHHhhcCCCCccccChh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEND---GK---GLESLVRKAFRERRPLSEVIDPA 539 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~---~~---~l~~~~~~~~~~~~~~~~~~d~~ 539 (584)
..||..|||||++. +..++.++|||||||++|||++|..|+...... .. .+...++........+......+
T Consensus 321 ~~~GT~~Y~APE~~~-~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~ 399 (461)
T PHA03211 321 GIAGTVDTNAPEVLA-GDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSR 399 (461)
T ss_pred ccCCCcCCcCHHHHc-CCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchH
Confidence 35899999999965 468999999999999999999988775432211 11 12222221111001111111111
Q ss_pred hhhhhhHH------------------HHHHHHHHHHhcccCCCCCCCCChHHHHHH
Q 007935 540 LVKEIHAK------------------RQVLATFHIALNCTELDPEFRPRMRTVSES 577 (584)
Q Consensus 540 ~~~~~~~~------------------~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 577 (584)
+....... .....+.+++.+||+.||++|||+.|+++.
T Consensus 400 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 400 LVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred HHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 11100000 001246778999999999999999999863
|
|
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.8e-25 Score=218.39 Aligned_cols=206 Identities=20% Similarity=0.296 Sum_probs=152.1
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||++....++ +.||+|++.... .....+++.+|+.++++++||||+++++++.+.+..++|||
T Consensus 5 ~~~lg~g~~g~~~~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08218 5 VKKIGEGSFGKAILVKSKEDG-----KQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMD 79 (256)
T ss_pred EEEeccCCceEEEEEEEcCCC-----CEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEe
Confidence 467999999999999987765 789999987542 22334689999999999999999999999999999999999
Q ss_pred cccCCcHHHHHhc---------------------------cc--ccccCCCCccccccCeEEecCCCcc-----------
Q 007935 426 FIRNGSLYAALHG---------------------------FG--LNRLLPGTSKVTKNETIVTSGTGSR----------- 465 (584)
Q Consensus 426 y~~~GsL~~~L~~---------------------------~g--~~~~~~~~~~i~~~~~~~~~~~~~~----------- 465 (584)
|+++++|.++++. .| |.++.+.|+.+..+..+...+++..
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~ 159 (256)
T cd08218 80 YCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELAR 159 (256)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhh
Confidence 9999999777643 12 3344445555555555555555422
Q ss_pred cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC-CCccccChhhhhhh
Q 007935 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR-PLSEVIDPALVKEI 544 (584)
Q Consensus 466 ~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~d~~~~~~~ 544 (584)
...|+..|+|||++. +..++.++|||||||+++||+||+.||... .....+........ +.+..++.
T Consensus 160 ~~~~~~~~~~pe~~~-~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~------ 227 (256)
T cd08218 160 TCIGTPYYLSPEICE-NRPYNNKSDIWALGCVLYEMCTLKHAFEAG-----NMKNLVLKIIRGSYPPVSSHYSY------ 227 (256)
T ss_pred hccCCccccCHHHhC-CCCCCCccchhHHHHHHHHHHcCCCCccCC-----CHHHHHHHHhcCCCCCCcccCCH------
Confidence 124778899999854 467899999999999999999999998642 22333333332221 11222222
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||+.+|++||+|.||++
T Consensus 228 -------~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 228 -------DLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred -------HHHHHHHHHhhCChhhCcCHHHHhh
Confidence 3456777899999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-25 Score=224.21 Aligned_cols=213 Identities=16% Similarity=0.225 Sum_probs=156.1
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||++.....+ +.||+|.+.... .....+.+.+|+++++.++||||+++++.+.+++..++||
T Consensus 6 ~~~l~~g~~~~v~~~~~~~~~-----~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 6 IKLISNGAYGAVYLVRHKETR-----QRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred eeEeecCCCeeEEEEEECCCC-----cEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 367999999999999987765 799999987652 2233467889999999999999999999999999999999
Q ss_pred ecccCCcHHHHHhc-------------------------c--cccccCCCCccccccCeEEecCCCccc-----------
Q 007935 425 DFIRNGSLYAALHG-------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI----------- 466 (584)
Q Consensus 425 Ey~~~GsL~~~L~~-------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~----------- 466 (584)
||+++|+|.+++.. . -|+++.+.|+.+..++.++..+++...
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~ 160 (305)
T cd05609 81 EYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLY 160 (305)
T ss_pred ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCcccccc
Confidence 99999999776642 2 356677777777666666666655321
Q ss_pred ---------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC
Q 007935 467 ---------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP 531 (584)
Q Consensus 467 ---------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~ 531 (584)
..++..|+|||++.. ..++.++|||||||++|||++|+.||.+.. ..++..........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~pf~~~~-----~~~~~~~~~~~~~~ 234 (305)
T cd05609 161 EGHIEKDTREFLDKQVCGTPEYIAPEVILR-QGYGKPVDWWAMGIILYEFLVGCVPFFGDT-----PEELFGQVISDDIE 234 (305)
T ss_pred ccccccchhhccccCCccCccccCchhccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhcccC
Confidence 246778999999655 578999999999999999999999997422 22333333222211
Q ss_pred CccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHh
Q 007935 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580 (584)
Q Consensus 532 ~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 580 (584)
.+.. ++. ....+.+++.+||+.+|++||++.++.+.|+.
T Consensus 235 ~~~~-~~~---------~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 235 WPEG-DEA---------LPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred CCCc-ccc---------CCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 1110 001 11234568888999999999997766666553
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.5e-26 Score=225.12 Aligned_cols=222 Identities=18% Similarity=0.230 Sum_probs=148.0
Q ss_pred ceeceeecCceEEEEEecC-CCCCCCceEEEEEEecCCCc-chhhHhHHHHHHHHHhc---CCCceeeeeEEEEe-----
Q 007935 347 AYVVGKSKNGIMYKVVVGR-GSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARV---QHPNIVRLKAFYYA----- 416 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~-~~~~~~~~~vAvK~l~~~~~-~~~~~~f~~Ei~~l~~l---~HpnIV~l~g~~~~----- 416 (584)
.+.||+|+||.||+|+... ++ +.||||+++.... ......+.+|+.+++++ +||||++++++|..
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 6 VAEIGEGAYGKVFKARDLKNGG-----RFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred eeEeccCCCeEEEEEEEcCCCC-----eEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 3579999999999998743 33 7899999876422 22235677888887766 69999999999863
Q ss_pred CCceeEeeecccCCcHHHHH---------------------------hccc--ccccCCCCccccccCeEEecCCCcc--
Q 007935 417 NDEKLLISDFIRNGSLYAAL---------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSR-- 465 (584)
Q Consensus 417 ~~~~~lV~Ey~~~GsL~~~L---------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~-- 465 (584)
....++||||++ |+|.+++ |..| |+++++.|+.+..++.++..++|..
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 159 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARI 159 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceEe
Confidence 456899999997 5775554 3333 5777778877777777777777643
Q ss_pred --------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhh-cCCCCcc--
Q 007935 466 --------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR-ERRPLSE-- 534 (584)
Q Consensus 466 --------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~-~~~~~~~-- 534 (584)
...||..|+|||++.. ..++.++|||||||++|||++|++||.+.... ..+......... .....+.
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~~f~~~~~~-~~~~~i~~~~~~~~~~~~~~~~ 237 (290)
T cd07862 160 YSFQMALTSVVVTLWYRAPEVLLQ-SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV-DQLGKILDVIGLPGEEDWPRDV 237 (290)
T ss_pred ccCCcccccccccccccChHHHhC-CCCCCccchHHHHHHHHHHHcCCCCcCCCCHH-HHHHHHHHHhCCCChhhchhhh
Confidence 2357889999998654 67899999999999999999999999753221 111111111000 0000000
Q ss_pred -----ccChhhhhhhhH--HHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 535 -----VIDPALVKEIHA--KRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 535 -----~~d~~~~~~~~~--~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+........ ......+.+++.+|++.||++|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 238 ALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred cccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 000000000000 011234567999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.8e-25 Score=217.66 Aligned_cols=208 Identities=26% Similarity=0.386 Sum_probs=152.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||++....+ ..+|+|.+..... ..+.|.+|++++++++|+||+++++++.+ ...+++|||
T Consensus 11 ~~~lg~g~~~~vy~~~~~~~------~~~~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~ 81 (260)
T cd05073 11 EKKLGAGQFGEVWMATYNKH------TKVAVKTMKPGSM--SVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEF 81 (260)
T ss_pred EeEecCccceEEEEEEecCC------ccEEEEecCCChh--HHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEe
Confidence 46799999999999987665 5799998875422 33789999999999999999999999887 788999999
Q ss_pred ccCCcHHHHHhc---------------------------c--cccccCCCCccccccCeEEecCCCccc-----------
Q 007935 427 IRNGSLYAALHG---------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI----------- 466 (584)
Q Consensus 427 ~~~GsL~~~L~~---------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~----------- 466 (584)
+++|+|.+++.. . -|+++.+.|..+..+..++..+++...
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~ 161 (260)
T cd05073 82 MAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTARE 161 (260)
T ss_pred CCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCCCccccc
Confidence 999999877643 1 356666777666666666666654221
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEI 544 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~ 544 (584)
..++..|+|||++.. ..++.++|||||||++||++| |+.||..... ........ ..... ... ..
T Consensus 162 ~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~-----~~~~~~~~-~~~~~-~~~-~~----- 227 (260)
T cd05073 162 GAKFPIKWTAPEAINF-GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN-----PEVIRALE-RGYRM-PRP-EN----- 227 (260)
T ss_pred CCcccccccCHhHhcc-CCcCccccchHHHHHHHHHHhcCCCCCCCCCH-----HHHHHHHh-CCCCC-CCc-cc-----
Confidence 123456999999554 678999999999999999999 9999874221 11121111 11111 000 11
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhh
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 581 (584)
....+.+++.+||+.+|++||++.++.+.|+.+
T Consensus 228 ----~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~~ 260 (260)
T cd05073 228 ----CPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 260 (260)
T ss_pred ----CCHHHHHHHHHHcccCcccCcCHHHHHHHHhcC
Confidence 112456788889999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-25 Score=222.59 Aligned_cols=205 Identities=20% Similarity=0.316 Sum_probs=151.5
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeecc
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 427 (584)
+.||+|+||.||++.....+ ..||+|.++.. .....+.|.+|++++++++||||+++++++.+++..++||||+
T Consensus 11 ~~l~~g~~~~v~~~~~~~~~-----~~~~iK~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (280)
T cd06611 11 GELGDGAFGKVYKAQHKETG-----LFAAAKIIQIE-SEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFC 84 (280)
T ss_pred HHhcCCCCceEEEEEEcCCC-----cEEEEEEEeeC-CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeecc
Confidence 45999999999999987654 79999999764 3333478999999999999999999999999999999999999
Q ss_pred cCCcHHHHHhc--------------------------cc--ccccCCCCccccccCeEEecCCCcc-----------ccc
Q 007935 428 RNGSLYAALHG--------------------------FG--LNRLLPGTSKVTKNETIVTSGTGSR-----------ISA 468 (584)
Q Consensus 428 ~~GsL~~~L~~--------------------------~g--~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~~ 468 (584)
++|+|.+++.. .| |+++.+.|+.+..+......+++.. ...
T Consensus 85 ~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 164 (280)
T cd06611 85 DGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDTFI 164 (280)
T ss_pred CCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhcccccccceee
Confidence 99999766542 23 4556666666666666666666532 125
Q ss_pred CCCcccCcccccc----CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC-C--ccccChhhh
Q 007935 469 ISNVYLAPEARIY----GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP-L--SEVIDPALV 541 (584)
Q Consensus 469 gt~~y~aPE~~~~----~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~-~--~~~~d~~~~ 541 (584)
++..|+|||++.. +..++.++|||||||++|||++|+.||..... ............+ + +..++
T Consensus 165 ~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~---- 235 (280)
T cd06611 165 GTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNP-----MRVLLKILKSEPPTLDQPSKWS---- 235 (280)
T ss_pred cchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCH-----HHHHHHHhcCCCCCcCCcccCC----
Confidence 7888999998542 24577899999999999999999999975321 1222222221111 0 11112
Q ss_pred hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 542 KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 542 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
..+.+++.+||+.+|++||++.++++
T Consensus 236 ---------~~~~~li~~~l~~~p~~Rps~~~il~ 261 (280)
T cd06611 236 ---------SSFNDFLKSCLVKDPDDRPTAAELLK 261 (280)
T ss_pred ---------HHHHHHHHHHhccChhhCcCHHHHhc
Confidence 23456778899999999999999975
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.8e-25 Score=217.17 Aligned_cols=206 Identities=20% Similarity=0.289 Sum_probs=152.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC-CceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN-DEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~-~~~~lV~ 424 (584)
.+.||+|++|.||++....++ +.||+|++.... .....+.+.+|++++++++|||++++++.+... +..++||
T Consensus 5 ~~~lg~g~~~~v~~~~~~~~~-----~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~ 79 (257)
T cd08223 5 VRVVGKGSYGEVSLVRHRTDG-----KQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVM 79 (257)
T ss_pred EEEecCCCCeEEEEEEEcCCC-----cEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEe
Confidence 467999999999999987765 789999997542 233446789999999999999999999988654 4578999
Q ss_pred ecccCCcHHHHHhc---------------------------c--cccccCCCCccccccCeEEecCCCcc----------
Q 007935 425 DFIRNGSLYAALHG---------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSR---------- 465 (584)
Q Consensus 425 Ey~~~GsL~~~L~~---------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~---------- 465 (584)
||+++++|.++++. . .|+++.+.|+.+..+..+...+++..
T Consensus 80 e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~ 159 (257)
T cd08223 80 GFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMA 159 (257)
T ss_pred cccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccCCcc
Confidence 99999999777642 2 35666777776666666666665422
Q ss_pred -cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC-CCccccChhhhhh
Q 007935 466 -ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR-PLSEVIDPALVKE 543 (584)
Q Consensus 466 -~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~d~~~~~~ 543 (584)
...++..|+|||+... ..++.++|||||||+++||++|+.||... .............. .....+++
T Consensus 160 ~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~l~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~----- 228 (257)
T cd08223 160 STLIGTPYYMSPELFSN-KPYNYKSDVWALGCCVYEMATLKHAFNAK-----DMNSLVYRIIEGKLPPMPKDYSP----- 228 (257)
T ss_pred ccccCCcCccChhHhcC-CCCCchhhhHHHHHHHHHHHcCCCCCCCC-----CHHHHHHHHHhcCCCCCccccCH-----
Confidence 2357888999998544 67899999999999999999999998742 22333322222221 11222222
Q ss_pred hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 544 IHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 544 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||+.+|++|||+.++++
T Consensus 229 --------~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 229 --------ELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred --------HHHHHHHHHhccCcccCCCHHHHhc
Confidence 4556888899999999999999975
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.3e-25 Score=217.81 Aligned_cols=208 Identities=22% Similarity=0.359 Sum_probs=151.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc----chhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeE
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA----TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLL 422 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~----~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~l 422 (584)
.+.||+|++|.||+|.....+ ..|++|.+..... ....+.|.+|++++++++||||+++++++.+.+..++
T Consensus 5 ~~~ig~g~~~~vy~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l 79 (258)
T cd06632 5 GELLGSGSFGSVYEGLNLDDG-----DFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYI 79 (258)
T ss_pred cceeeecCCceEEEEEEcCCC-----cEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEE
Confidence 357999999999999987544 7899999865421 2234779999999999999999999999999999999
Q ss_pred eeecccCCcHHHHHhcc-------------------------c--ccccCCCCccccccCeEEecCCCcc----------
Q 007935 423 ISDFIRNGSLYAALHGF-------------------------G--LNRLLPGTSKVTKNETIVTSGTGSR---------- 465 (584)
Q Consensus 423 V~Ey~~~GsL~~~L~~~-------------------------g--~~~~~~~~~~i~~~~~~~~~~~~~~---------- 465 (584)
||||+++++|.++++.. | |.++.+.|+.+..+...+..+++..
T Consensus 80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~~ 159 (258)
T cd06632 80 FLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAK 159 (258)
T ss_pred EEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceecccccccc
Confidence 99999999998776432 2 3455556655655566666665422
Q ss_pred cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHh-hcCCCCccccChhhhhhh
Q 007935 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF-RERRPLSEVIDPALVKEI 544 (584)
Q Consensus 466 ~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~d~~~~~~~ 544 (584)
...|+..|+|||.+.....++.++|||||||++|||++|+.||.... .......... .....++..+++.
T Consensus 160 ~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~----~~~~~~~~~~~~~~~~~~~~~~~~----- 230 (258)
T cd06632 160 SFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLE----GVAAVFKIGRSKELPPIPDHLSDE----- 230 (258)
T ss_pred ccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCc----HHHHHHHHHhcccCCCcCCCcCHH-----
Confidence 23578889999986553338899999999999999999999997532 1111111111 1111122223333
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+.+++.+||+.+|++||++.+++.
T Consensus 231 --------~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 231 --------AKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred --------HHHHHHHHhhcCcccCcCHHHHhc
Confidence 345777799999999999999975
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.1e-26 Score=225.56 Aligned_cols=206 Identities=17% Similarity=0.251 Sum_probs=151.7
Q ss_pred eceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeeccc
Q 007935 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIR 428 (584)
Q Consensus 349 ~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~ 428 (584)
.||+|+||.||++.....+ +.||+|.+..... ...+.+.+|+.+++.++||||+++++++..++..++||||++
T Consensus 28 ~ig~g~~g~v~~~~~~~~~-----~~v~iK~~~~~~~-~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~ 101 (297)
T cd06659 28 KIGEGSTGIVCIAREKHSG-----RQVAVKMMDLRKQ-QRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQ 101 (297)
T ss_pred hcCCCCceeEEEEEEcCCC-----CEEEEEEEEeccc-chHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCC
Confidence 5999999999999987654 7999999876432 234678999999999999999999999999999999999999
Q ss_pred CCcHHHHH------------------------hccc--ccccCCCCccccccCeEEecCCCcc-----------cccCCC
Q 007935 429 NGSLYAAL------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSR-----------ISAISN 471 (584)
Q Consensus 429 ~GsL~~~L------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~~gt~ 471 (584)
+++|..++ |+.| |+++.+.|+.+..++..+..+++.. ...|+.
T Consensus 102 ~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~ 181 (297)
T cd06659 102 GGALTDIVSQTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTP 181 (297)
T ss_pred CCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccccccceecCc
Confidence 99996554 3333 5666667777766666777666532 235788
Q ss_pred cccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHHHHH
Q 007935 472 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVL 551 (584)
Q Consensus 472 ~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 551 (584)
.|+|||++.. ..++.++|||||||++|||++|+.||..... ................ ..+.. ..
T Consensus 182 ~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~-~~~~~---------~~ 245 (297)
T cd06659 182 YWMAPEVISR-TPYGTEVDIWSLGIMVIEMVDGEPPYFSDSP-----VQAMKRLRDSPPPKLK-NAHKI---------SP 245 (297)
T ss_pred cccCHHHHcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHhccCCCCcc-ccCCC---------CH
Confidence 9999999554 6789999999999999999999999874221 1111111111111000 00011 11
Q ss_pred HHHHHHhcccCCCCCCCCChHHHHH
Q 007935 552 ATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 552 ~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||+.+|++||++.++++
T Consensus 246 ~l~~~i~~~l~~~P~~Rps~~~ll~ 270 (297)
T cd06659 246 VLRDFLERMLTREPQERATAQELLD 270 (297)
T ss_pred HHHHHHHHHhcCCcccCcCHHHHhh
Confidence 3456777899999999999999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.7e-25 Score=218.93 Aligned_cols=208 Identities=25% Similarity=0.363 Sum_probs=151.3
Q ss_pred eeceeecCceEEEEEecC-CCCCCCceEEEEEEecCCC---------cchhhHhHHHHHHHHHh-cCCCceeeeeEEEEe
Q 007935 348 YVVGKSKNGIMYKVVVGR-GSGMGAPTVVAVRRLTEGD---------ATWRFKDFESEVEAIAR-VQHPNIVRLKAFYYA 416 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~-~~~~~~~~~vAvK~l~~~~---------~~~~~~~f~~Ei~~l~~-l~HpnIV~l~g~~~~ 416 (584)
+.||+|+||.||+|.... ++ +.+|+|.+.... .....+++.+|+.++.+ ++||||+++++++.+
T Consensus 6 ~~ig~G~~~~v~~~~~~~~~~-----~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 6 EHLGSGAFGCVYKVRKKNNGQ-----NLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred hhhcCCCCceEEEEEEcCCCC-----ceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 469999999999999877 33 789999886431 12234567889998875 799999999999999
Q ss_pred CCceeEeeecccCCcHHHHH-----------------------------hc-c--cccccCCCCccccccCeEEecCCCc
Q 007935 417 NDEKLLISDFIRNGSLYAAL-----------------------------HG-F--GLNRLLPGTSKVTKNETIVTSGTGS 464 (584)
Q Consensus 417 ~~~~~lV~Ey~~~GsL~~~L-----------------------------~~-~--g~~~~~~~~~~i~~~~~~~~~~~~~ 464 (584)
++..++||||+++++|.+++ |. . .|+++.+.|+.+..+...+..+++.
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~ 160 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGL 160 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccc
Confidence 99999999999999996654 21 1 2455555666665566666666653
Q ss_pred c----------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC-CCc
Q 007935 465 R----------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR-PLS 533 (584)
Q Consensus 465 ~----------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~ 533 (584)
. ...|+..|+|||++.. ..++.++||||||+++|||++|+.||... .............. +..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~~~~~Dv~slG~ll~~l~~g~~p~~~~-----~~~~~~~~~~~~~~~~~~ 234 (269)
T cd08528 161 AKQKQPESKLTSVVGTILYSCPEIVKN-EPYGEKADVWAFGCILYQMCTLQPPFYST-----NMLSLATKIVEAVYEPLP 234 (269)
T ss_pred eeecccccccccccCcccCcChhhhcC-CCCchHHHHHHHHHHHHHHHhCCCccccc-----CHHHHHHHHhhccCCcCC
Confidence 2 2357888999999654 67899999999999999999999998642 22222222222111 111
Q ss_pred c-ccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHH
Q 007935 534 E-VIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579 (584)
Q Consensus 534 ~-~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~ 579 (584)
. .++ ..+.+++.+||+.||++||++.|+..+++
T Consensus 235 ~~~~~-------------~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 235 EGMYS-------------EDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred cccCC-------------HHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 1 122 23456778899999999999999999885
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-25 Score=219.60 Aligned_cols=205 Identities=18% Similarity=0.292 Sum_probs=151.5
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeecc
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 427 (584)
+.||+|+||.||+|....++ ..||+|.++.... .++|.+|++++++++||||+++++++.+++..+++|||+
T Consensus 9 ~~i~~g~~~~v~~~~~~~~~-----~~~~~k~~~~~~~---~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 80 (256)
T cd06612 9 EKLGEGSYGSVYKAIHKETG-----QVVAIKVVPVEED---LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC 80 (256)
T ss_pred hhhcCCCCeEEEEEEEcCCC-----cEEEEEEeecHHH---HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence 46999999999999988754 7899999976422 478999999999999999999999999999999999999
Q ss_pred cCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCcc-----------ccc
Q 007935 428 RNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSR-----------ISA 468 (584)
Q Consensus 428 ~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~~ 468 (584)
++++|.+++.. . .|.++.+.|+.+..+...+..+++.. ...
T Consensus 81 ~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 160 (256)
T cd06612 81 GAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVI 160 (256)
T ss_pred CCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCcccccccc
Confidence 99999777642 2 34566666666666666666665422 124
Q ss_pred CCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHH
Q 007935 469 ISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKR 548 (584)
Q Consensus 469 gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 548 (584)
++..|+|||++. +..++.++|||||||++|||+||+.||....... .. ........ ...-.+ ..
T Consensus 161 ~~~~y~~PE~~~-~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~----~~-~~~~~~~~--~~~~~~--------~~ 224 (256)
T cd06612 161 GTPFWMAPEVIQ-EIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMR----AI-FMIPNKPP--PTLSDP--------EK 224 (256)
T ss_pred CCccccCHHHHh-cCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhh----hh-hhhccCCC--CCCCch--------hh
Confidence 678899999854 4688999999999999999999999987532211 11 11110000 000000 00
Q ss_pred HHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 549 QVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 549 ~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
....+.+++.+||+.||++|||+.||++
T Consensus 225 ~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 225 WSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred cCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 1124566888899999999999999975
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.3e-25 Score=219.75 Aligned_cols=206 Identities=17% Similarity=0.244 Sum_probs=148.0
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeC------Cce
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYAN------DEK 420 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~------~~~ 420 (584)
+.||+|+||.||+|.....+ +.||+|++..... ....+.+|+.++.++ +||||+++++++... +..
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~-----~~~aik~~~~~~~--~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 84 (272)
T cd06637 12 ELVGNGTYGQVYKGRHVKTG-----QLAAIKVMDVTGD--EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQL 84 (272)
T ss_pred HheeecCCeEEEEEEEcCCC-----cEEEEEEEEcCCc--cHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEE
Confidence 46999999999999987765 8999999976432 236789999999999 799999999999763 458
Q ss_pred eEeeecccCCcHHHHHhc---------------------------cc--ccccCCCCccccccCeEEecCCCcc------
Q 007935 421 LLISDFIRNGSLYAALHG---------------------------FG--LNRLLPGTSKVTKNETIVTSGTGSR------ 465 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~~L~~---------------------------~g--~~~~~~~~~~i~~~~~~~~~~~~~~------ 465 (584)
++||||+++|+|.+++.. .+ |+++.+.|+.+..+..++..+++..
T Consensus 85 ~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~ 164 (272)
T cd06637 85 WLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT 164 (272)
T ss_pred EEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceecccc
Confidence 899999999999776653 22 3455556666666666666666542
Q ss_pred -----cccCCCcccCcccccc----CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCcccc
Q 007935 466 -----ISAISNVYLAPEARIY----GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVI 536 (584)
Q Consensus 466 -----~~~gt~~y~aPE~~~~----~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 536 (584)
...|+..|+|||++.. +..++.++|||||||++|||++|+.||..... ...... ..... .....
T Consensus 165 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~----~~~~~~-~~~~~--~~~~~ 237 (272)
T cd06637 165 VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP----MRALFL-IPRNP--APRLK 237 (272)
T ss_pred cccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCH----HHHHHH-HhcCC--CCCCC
Confidence 1357888999998642 23578899999999999999999999864221 111111 11111 11111
Q ss_pred ChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 537 DPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 537 d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+... ...+.+++.+||..+|.+|||+.|+++
T Consensus 238 ~~~~---------~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 238 SKKW---------SKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred CCCc---------CHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 1111 124567888899999999999999875
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.5e-26 Score=230.06 Aligned_cols=207 Identities=20% Similarity=0.236 Sum_probs=168.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc-chhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~-~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
...||+|.|++|..|++..++ ..||+|.+++... ......+.+|+++|..++|||||+++.+.......|+|||
T Consensus 61 ~~tig~g~f~~V~La~~~~t~-----~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~e 135 (596)
T KOG0586|consen 61 IKTIGKGNFAKVKLARHILTG-----TEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVME 135 (596)
T ss_pred eeeeccceeEEEEeeEecCCC-----ceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEE
Confidence 356999999999999998876 8999999988732 2233558999999999999999999999999999999999
Q ss_pred cccCCcHHHHHhcc---------------------------cccccCCCCccccccCeEEecCCCcc----------ccc
Q 007935 426 FIRNGSLYAALHGF---------------------------GLNRLLPGTSKVTKNETIVTSGTGSR----------ISA 468 (584)
Q Consensus 426 y~~~GsL~~~L~~~---------------------------g~~~~~~~~~~i~~~~~~~~~~~~~~----------~~~ 468 (584)
|+.+|.+++||... .|++++.+|..+..+.++++.+|+.+ ..+
T Consensus 136 ya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~lqt~c 215 (596)
T KOG0586|consen 136 YASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGLMLQTFC 215 (596)
T ss_pred eccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeecccccccccC
Confidence 99999999888642 46888888888887777888777643 358
Q ss_pred CCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHH
Q 007935 469 ISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKR 548 (584)
Q Consensus 469 gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 548 (584)
|++.|.|||++......++++|+||+||++|-|+.|..||++ ..+..+-...+..+..++..++-+..+
T Consensus 216 gsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG-----~~lk~Lr~rvl~gk~rIp~~ms~dce~------ 284 (596)
T KOG0586|consen 216 GSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDG-----QNLKELRPRVLRGKYRIPFYMSCDCED------ 284 (596)
T ss_pred CCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCC-----cccccccchheeeeecccceeechhHH------
Confidence 999999999966545557899999999999999999999985 344555555666666666666665544
Q ss_pred HHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 549 QVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 549 ~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
++.+.+..+|.+|++++++.+
T Consensus 285 -------lLrk~lvl~Pskr~~~dqim~ 305 (596)
T KOG0586|consen 285 -------LLRKFLVLNPSKRGPCDQIMK 305 (596)
T ss_pred -------HHHHhhccCccccCCHHHhhh
Confidence 455589999999999999874
|
|
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.3e-26 Score=233.66 Aligned_cols=158 Identities=18% Similarity=0.302 Sum_probs=130.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||++.....+ +.||||.++... .....+.+.+|+.++.+++||||+++++.+.+++..++||
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 6 LKVIGRGAFGEVRLVQKKDTG-----HIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred EEEEeeCCCEEEEEEEECCCC-----CEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 367999999999999988765 799999997531 2233467889999999999999999999999999999999
Q ss_pred ecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCcc------------
Q 007935 425 DFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR------------ 465 (584)
Q Consensus 425 Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~------------ 465 (584)
||+++|+|.++++ .. -|++++++|+.+..++.++..++|..
T Consensus 81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~ 160 (360)
T cd05627 81 EFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFY 160 (360)
T ss_pred eCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccccc
Confidence 9999999976664 22 35778888887777777777666531
Q ss_pred ----------------------------------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCC
Q 007935 466 ----------------------------------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAG 510 (584)
Q Consensus 466 ----------------------------------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~ 510 (584)
...||+.|||||++. +..++.++|||||||++|||+||+.||..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-~~~~~~~~DiwSlGvilyel~tG~~Pf~~ 238 (360)
T cd05627 161 RNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFM-QTGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (360)
T ss_pred cccccCCcccccccccccccccccccccccccccccCCCccccCHHHHc-CCCCCCcceeccccceeeecccCCCCCCC
Confidence 135899999999954 46899999999999999999999999975
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-25 Score=223.07 Aligned_cols=223 Identities=14% Similarity=0.156 Sum_probs=152.1
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeecc
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 427 (584)
+.||+|+||.||+|.....+ ..||+|++...........+.+|++++++++|+||+++++++.+++..++||||+
T Consensus 11 ~~ig~g~~~~v~~~~~~~~~-----~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 85 (291)
T cd07870 11 EKLGEGSYATVYKGISRING-----QLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYM 85 (291)
T ss_pred EEEEecCCEEEEEEEEcCCC-----cEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEecc
Confidence 57999999999999987665 7899999976533333357889999999999999999999999999999999999
Q ss_pred cCCcHHHHH--------------------------hccc--ccccCCCCccccccCeEEecCCCccc-----------cc
Q 007935 428 RNGSLYAAL--------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSRI-----------SA 468 (584)
Q Consensus 428 ~~GsL~~~L--------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~-----------~~ 468 (584)
. ++|.+++ |+.| |+++.+.|+.+..++.++..+++... ..
T Consensus 86 ~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~ 164 (291)
T cd07870 86 H-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSSEV 164 (291)
T ss_pred c-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCCCCCCcc
Confidence 6 5664443 3333 56677777777667777777766321 24
Q ss_pred CCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHH----------hhcCCCC-cccc-
Q 007935 469 ISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKA----------FRERRPL-SEVI- 536 (584)
Q Consensus 469 gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~----------~~~~~~~-~~~~- 536 (584)
++..|+|||++.....++.++|||||||++|||+||+.||.........+....... ....... ....
T Consensus 165 ~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (291)
T cd07870 165 VTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFL 244 (291)
T ss_pred ccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhcc
Confidence 678899999865444678999999999999999999999975332111111110000 0000000 0000
Q ss_pred ---ChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 537 ---DPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 537 ---d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+............+.+++.+|++.||.+|||+.|++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 245 PCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred ccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 0000000000011245667899999999999999999874
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.5e-25 Score=220.18 Aligned_cols=223 Identities=19% Similarity=0.278 Sum_probs=154.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
...||+|+||.||+|+....+ +.||+|++.... .....+.+.+|++++++++||||+++++++...+..++|||
T Consensus 6 ~~~l~~g~~~~v~~~~~~~~~-----~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 6 LSKIGEGSYGVVFKCRNRETG-----QIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred eeeecccCCeEEEEEEECCCC-----cEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 356999999999999987655 799999987542 22233678899999999999999999999999999999999
Q ss_pred cccCCcHHHH-------------------------Hhccc--ccccCCCCccccccCeEEecCCCccc-----------c
Q 007935 426 FIRNGSLYAA-------------------------LHGFG--LNRLLPGTSKVTKNETIVTSGTGSRI-----------S 467 (584)
Q Consensus 426 y~~~GsL~~~-------------------------L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~-----------~ 467 (584)
|+++++|..+ ||+.| |+++.+.|+.+..++.++..+++... .
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 160 (286)
T cd07847 81 YCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYTDY 160 (286)
T ss_pred ccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCcccccCc
Confidence 9999887543 44443 56677777777666667776665322 2
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcC----------CC-Ccccc
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER----------RP-LSEVI 536 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~----------~~-~~~~~ 536 (584)
.++..|+|||++..+..++.++|||||||++|||+||+.||.+....+ .+..+. ...... .. .....
T Consensus 161 ~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T cd07847 161 VATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVD-QLYLIR-KTLGDLIPRHQQIFSTNQFFKGLS 238 (286)
T ss_pred ccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHH-HHhCCCChHHhhhccccccccccc
Confidence 467789999986554568899999999999999999999997533211 111111 110000 00 00000
Q ss_pred Chhhh--hhhh--HHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 537 DPALV--KEIH--AKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 537 d~~~~--~~~~--~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+... .... .......+.+++.+||+.+|++|||+.|++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 239 IPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred CCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 00000 0000 0011245778999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.8e-25 Score=219.96 Aligned_cols=208 Identities=19% Similarity=0.220 Sum_probs=147.4
Q ss_pred eceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc--chhhHhHHHHHHHHHh---cCCCceeeeeEEEEeCCceeEe
Q 007935 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA--TWRFKDFESEVEAIAR---VQHPNIVRLKAFYYANDEKLLI 423 (584)
Q Consensus 349 ~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~--~~~~~~f~~Ei~~l~~---l~HpnIV~l~g~~~~~~~~~lV 423 (584)
+||+|+||.||++.....+ +.||+|.+..... ....+.+.+|..++.. .+||||+++++++..++..++|
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv 75 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTG-----KMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFI 75 (279)
T ss_pred CcccCCCeEEEEEEECCCC-----cEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEE
Confidence 4899999999999987665 7999999876422 1222345555544443 4799999999999999999999
Q ss_pred eecccCCcHHHHHhc-------------------------c--cccccCCCCccccccCeEEecCCCcc---------cc
Q 007935 424 SDFIRNGSLYAALHG-------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSR---------IS 467 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~~-------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~---------~~ 467 (584)
|||+++|+|.++++. . -|+++.+.|+.+..++.++..+++.. ..
T Consensus 76 ~e~~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 155 (279)
T cd05633 76 LDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS 155 (279)
T ss_pred EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCc
Confidence 999999999766642 2 25666667766666666666666633 23
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHH
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAK 547 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 547 (584)
.|+..|+|||.+..+..++.++|||||||++|||+||+.||...... ...............+++.++++
T Consensus 156 ~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-------- 225 (279)
T cd05633 156 VGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK--DKHEIDRMTLTVNVELPDSFSPE-------- 225 (279)
T ss_pred CCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCc--CHHHHHHHhhcCCcCCccccCHH--------
Confidence 58899999998655566899999999999999999999999753322 12222111111122223333333
Q ss_pred HHHHHHHHHHhcccCCCCCCCC-----ChHHHHH
Q 007935 548 RQVLATFHIALNCTELDPEFRP-----RMRTVSE 576 (584)
Q Consensus 548 ~~~~~~~~l~~~Cl~~~P~~RP-----t~~ev~~ 576 (584)
+.+++.+||+.||++|| |++|+++
T Consensus 226 -----~~~li~~~l~~~p~~R~~~~~~~~~~~~~ 254 (279)
T cd05633 226 -----LKSLLEGLLQRDVSKRLGCLGRGAQEVKE 254 (279)
T ss_pred -----HHHHHHHHhcCCHHHhcCCCCCCHHHHHh
Confidence 34566779999999999 5888876
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-25 Score=224.52 Aligned_cols=208 Identities=17% Similarity=0.251 Sum_probs=153.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||++.....+ ..||+|.+...... ..+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~~-----~~vaiK~~~~~~~~-~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 97 (297)
T cd06656 24 FEKIGQGASGTVYTAIDIATG-----QEVAIKQMNLQQQP-KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 97 (297)
T ss_pred eeeeccCCCeEEEEEEECCCC-----CEEEEEEEecCccc-hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecc
Confidence 357999999999999976554 79999999764332 336789999999999999999999999999999999999
Q ss_pred ccCCcHHHHHh------------------------cc--cccccCCCCccccccCeEEecCCCcc-----------cccC
Q 007935 427 IRNGSLYAALH------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR-----------ISAI 469 (584)
Q Consensus 427 ~~~GsL~~~L~------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~~g 469 (584)
+++|+|.++++ +. -|+++.+.|+.+..++.++..+++.. ...+
T Consensus 98 ~~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~ 177 (297)
T cd06656 98 LAGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVG 177 (297)
T ss_pred cCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCccCcCcccC
Confidence 99999976653 22 35666677777766677777776532 2357
Q ss_pred CCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHHH
Q 007935 470 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQ 549 (584)
Q Consensus 470 t~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 549 (584)
+..|+|||.... ..++.++|||||||++||++||+.||....... .... ...... +....+.. .
T Consensus 178 ~~~y~aPE~~~~-~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~----~~~~-~~~~~~--~~~~~~~~--------~ 241 (297)
T cd06656 178 TPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR----ALYL-IATNGT--PELQNPER--------L 241 (297)
T ss_pred CccccCHHHHcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcch----heee-eccCCC--CCCCCccc--------c
Confidence 788999998544 678999999999999999999999997533211 1100 011111 01001110 1
Q ss_pred HHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 550 VLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 550 ~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
...+.+++.+||+.+|++||++.++++
T Consensus 242 ~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 242 SAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 123456788899999999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-25 Score=228.92 Aligned_cols=216 Identities=19% Similarity=0.258 Sum_probs=151.9
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC------Cce
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN------DEK 420 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~------~~~ 420 (584)
+.||+|+||.||+|....++ +.||||++.... .....+.+.+|++++++++|||||++++++... ...
T Consensus 21 ~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 95 (343)
T cd07878 21 TPVGSGAYGSVCSAYDTRLR-----QKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEV 95 (343)
T ss_pred eecccCCCeEEEEEEECCCC-----CEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCcE
Confidence 57999999999999987665 799999997642 222346688999999999999999999988643 357
Q ss_pred eEeeecccCCcHHH------------------------HHhccc--ccccCCCCccccccCeEEecCCCcc--------c
Q 007935 421 LLISDFIRNGSLYA------------------------ALHGFG--LNRLLPGTSKVTKNETIVTSGTGSR--------I 466 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~------------------------~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~--------~ 466 (584)
++++|++ +++|.+ |||+.| |+++++.|+.+..+..++..++|.. .
T Consensus 96 ~~~~~~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 174 (343)
T cd07878 96 YLVTNLM-GADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADDEMTG 174 (343)
T ss_pred EEEeecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecCCCcCC
Confidence 8999998 667743 345444 6788888888877777888777643 2
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhc-CCCCccc---cC-----
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE-RRPLSEV---ID----- 537 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~~~---~d----- 537 (584)
..||..|+|||++.....++.++|||||||++|||++|+.||.+... .+.+...... ..+..+. +.
T Consensus 175 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (343)
T cd07878 175 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDY-----IDQLKRIMEVVGTPSPEVLKKISSEHAR 249 (343)
T ss_pred ccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHHHhCCCCHHHHHhcchhhHH
Confidence 36789999999865545789999999999999999999999975321 1111111100 0000000 00
Q ss_pred -----------hhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 538 -----------PALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 538 -----------~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
..+..... .....+.+++.+|++.||++|||+.|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~li~~mL~~dp~~R~s~~ell~ 297 (343)
T cd07878 250 KYIQSLPHMPQQDLKKIFR--GANPLAIDLLEKMLVLDSDKRISASEALA 297 (343)
T ss_pred HHhhccccccchhHHHhcc--CCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00000000 01123568899999999999999999985
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.2e-25 Score=221.63 Aligned_cols=208 Identities=23% Similarity=0.350 Sum_probs=147.4
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEe-----CCcee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYA-----NDEKL 421 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~-----~~~~~ 421 (584)
+.||+|+||.||++.....+ +.+|+|.++..... .+.+.+|+.+++++ +||||+++++++.. ++..+
T Consensus 24 ~~lg~g~~~~vy~~~~~~~~-----~~~~ik~~~~~~~~--~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~ 96 (286)
T cd06638 24 ETIGKGTYGKVFKVLNKKNG-----SKAAVKILDPIHDI--DEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLW 96 (286)
T ss_pred eeeccCCCcEEEEEEECCCC-----ceeEEEeeccccch--HHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEE
Confidence 57999999999999987765 78999988653222 26788999999999 79999999999853 35689
Q ss_pred EeeecccCCcHHHHHhc-----------------------------c--cccccCCCCccccccCeEEecCCCcc-----
Q 007935 422 LISDFIRNGSLYAALHG-----------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSR----- 465 (584)
Q Consensus 422 lV~Ey~~~GsL~~~L~~-----------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~----- 465 (584)
+||||+++|+|.++++. . -|+++.+.|+.+..+..++..+++..
T Consensus 97 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~ 176 (286)
T cd06638 97 LVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTS 176 (286)
T ss_pred EEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCCceeeccc
Confidence 99999999999776542 1 24555566666665555666665532
Q ss_pred ------cccCCCcccCcccccc----CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccc
Q 007935 466 ------ISAISNVYLAPEARIY----GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEV 535 (584)
Q Consensus 466 ------~~~gt~~y~aPE~~~~----~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 535 (584)
...|+..|+|||++.. +..++.++|||||||++|||++|+.||..... ...+.. ..... ....
T Consensus 177 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~----~~~~~~-~~~~~--~~~~ 249 (286)
T cd06638 177 TRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHP----MRALFK-IPRNP--PPTL 249 (286)
T ss_pred CCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCch----hHHHhh-ccccC--CCcc
Confidence 2357889999998542 24578899999999999999999999874321 111111 11111 0111
Q ss_pred cChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHH
Q 007935 536 IDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSES 577 (584)
Q Consensus 536 ~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 577 (584)
.++.. ....+.+++.+||+.||++|||+.|+++.
T Consensus 250 ~~~~~--------~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 250 HQPEL--------WSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred cCCCC--------cCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 11211 01245568888999999999999999864
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.7e-25 Score=216.79 Aligned_cols=213 Identities=20% Similarity=0.345 Sum_probs=154.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||.|+||.||+|....++ ..||+|++.........+.+.+|+++++.++|+||+++++.+..++..++||||
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 6 IEVIGVGATAVVYAAICLPNN-----EKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred eeeecCCCCeEEEEEEEcCCC-----cEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 467999999999999987654 789999997654444558899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc----------------------------cc--ccccCCCCccccccCeEEecCCCcc-----------
Q 007935 427 IRNGSLYAALHG----------------------------FG--LNRLLPGTSKVTKNETIVTSGTGSR----------- 465 (584)
Q Consensus 427 ~~~GsL~~~L~~----------------------------~g--~~~~~~~~~~i~~~~~~~~~~~~~~----------- 465 (584)
+++++|.++++. .| |.++.+.++.+..+...+..+++..
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~ 160 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTR 160 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccc
Confidence 999999877743 12 4455556665655555555555421
Q ss_pred ----cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhh
Q 007935 466 ----ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALV 541 (584)
Q Consensus 466 ----~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~ 541 (584)
...|+..|+|||++.....++.++|||||||++|||++|+.||...... . ..........+ .......
T Consensus 161 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~----~-~~~~~~~~~~~---~~~~~~~ 232 (267)
T cd06610 161 KVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPM----K-VLMLTLQNDPP---SLETGAD 232 (267)
T ss_pred cccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChh----h-hHHHHhcCCCC---CcCCccc
Confidence 1247888999998665447899999999999999999999999753221 1 11111111111 0111000
Q ss_pred hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 542 KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 542 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.......+.+++.+||+.||++|||+.|+++
T Consensus 233 ----~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 233 ----YKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred ----cccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 0011234567888899999999999999975
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.6e-25 Score=219.40 Aligned_cols=212 Identities=21% Similarity=0.340 Sum_probs=149.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc---------chhhHhHHHHHHHHHhcCCCceeeeeEEEEeC
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA---------TWRFKDFESEVEAIARVQHPNIVRLKAFYYAN 417 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~---------~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~ 417 (584)
.+.||+|+||.||+|.....+ +.||+|.++.... ....+.+.+|++++++++||||+++++++...
T Consensus 6 ~~~lg~g~~~~vy~~~~~~~~-----~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 80 (272)
T cd06629 6 GELIGKGTYGRVYLALNVTTG-----EMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTE 80 (272)
T ss_pred cceecccCceEEEEEeecCCC-----ceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccC
Confidence 457999999999999877654 7899998864211 11135688999999999999999999999999
Q ss_pred CceeEeeecccCCcHHHHHhcc-------------------------c--ccccCCCCccccccCeEEecCCCcc-----
Q 007935 418 DEKLLISDFIRNGSLYAALHGF-------------------------G--LNRLLPGTSKVTKNETIVTSGTGSR----- 465 (584)
Q Consensus 418 ~~~~lV~Ey~~~GsL~~~L~~~-------------------------g--~~~~~~~~~~i~~~~~~~~~~~~~~----- 465 (584)
+..++||||+++|+|.++++.. + |.++.++|+.+..+...+..+++..
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~ 160 (272)
T cd06629 81 EYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDD 160 (272)
T ss_pred CceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeeccccccccc
Confidence 9999999999999997776542 2 3455556655555555666555422
Q ss_pred --------cccCCCcccCccccccCC-CCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhc-CCCCccc
Q 007935 466 --------ISAISNVYLAPEARIYGS-KFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE-RRPLSEV 535 (584)
Q Consensus 466 --------~~~gt~~y~aPE~~~~~~-~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~~~ 535 (584)
...|+..|+|||++.... .++.++||||||+++||+++|+.||.... ....+....... ...+...
T Consensus 161 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~----~~~~~~~~~~~~~~~~~~~~ 236 (272)
T cd06629 161 IYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEE----AIAAMFKLGNKRSAPPIPPD 236 (272)
T ss_pred cccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcc----hHHHHHHhhccccCCcCCcc
Confidence 124678899999855432 47899999999999999999999986321 122222111111 1111111
Q ss_pred cChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 536 IDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 536 ~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
..+. ....+.+++.+||+.+|++|||+.+|++
T Consensus 237 ~~~~---------~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 237 VSMN---------LSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred cccc---------CCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 1111 1235566888899999999999999986
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.6e-25 Score=221.06 Aligned_cols=207 Identities=19% Similarity=0.281 Sum_probs=151.1
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
+.||+|+||.||+|+...++ +.||+|.+.... .....+++.+|++++++++||||++++++|.+.+..++|||
T Consensus 21 ~~lg~g~~g~vy~~~~~~~~-----~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e 95 (307)
T cd06607 21 REIGHGSFGAVYFARDVRTN-----EVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVME 95 (307)
T ss_pred eeecCCCCeEEEEEEEcCCC-----cEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEHH
Confidence 57999999999999987655 799999986532 22334678999999999999999999999999999999999
Q ss_pred cccCCcHHH--------------------------HHhccc--ccccCCCCccccccCeEEecCCCcc-------cccCC
Q 007935 426 FIRNGSLYA--------------------------ALHGFG--LNRLLPGTSKVTKNETIVTSGTGSR-------ISAIS 470 (584)
Q Consensus 426 y~~~GsL~~--------------------------~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~-------~~~gt 470 (584)
|+++ ++.+ |||+.| |+++.+.|+.+..++.++..+++.. ...++
T Consensus 96 ~~~g-~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~~~~~ 174 (307)
T cd06607 96 YCLG-SASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPANSFVGT 174 (307)
T ss_pred hhCC-CHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCCCCCccCC
Confidence 9974 5533 334444 5667777777777777777766533 23577
Q ss_pred CcccCccccc--cCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHH
Q 007935 471 NVYLAPEARI--YGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKR 548 (584)
Q Consensus 471 ~~y~aPE~~~--~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 548 (584)
..|+|||++. ....++.++|||||||++|||+||+.||.... ............. +.. .+ ..
T Consensus 175 ~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~-----~~~~~~~~~~~~~--~~~-~~--------~~ 238 (307)
T cd06607 175 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-----AMSALYHIAQNDS--PTL-SS--------ND 238 (307)
T ss_pred ccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCcc-----HHHHHHHHhcCCC--CCC-Cc--------hh
Confidence 8899999864 23568899999999999999999999986422 1111111111111 111 00 01
Q ss_pred HHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 549 QVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 549 ~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
....+.+++.+||+.+|++||++.+|+.
T Consensus 239 ~~~~~~~li~~~l~~~p~~Rp~~~~il~ 266 (307)
T cd06607 239 WSDYFRNFVDSCLQKIPQDRPSSEELLK 266 (307)
T ss_pred hCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 1234667888999999999999999986
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-25 Score=223.47 Aligned_cols=220 Identities=19% Similarity=0.286 Sum_probs=152.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc-chhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~-~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|...+++ +.||+|++..... ....+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 6 ~~~lg~g~~~~vy~~~~~~~~-----~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 6 LGLVGEGSYGMVMKCKHKETG-----QIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred eeeeccCCCeEEEEEEECCCC-----CEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 367999999999999987655 7999999876422 2234678899999999999999999999999999999999
Q ss_pred cccCCcHHHHH-------------------------hccc--ccccCCCCccccccCeEEecCCCcc-----------cc
Q 007935 426 FIRNGSLYAAL-------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSR-----------IS 467 (584)
Q Consensus 426 y~~~GsL~~~L-------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~ 467 (584)
|+++++|.++. |+.| |.++.+.|+.+..+..++..+++.. ..
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 160 (286)
T cd07846 81 FVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDY 160 (286)
T ss_pred cCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccCcc
Confidence 99998875443 4333 4555666666666666666565422 12
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCc--------------
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLS-------------- 533 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~-------------- 533 (584)
.++..|+|||++.....++.++|||||||++|||++|++||..... ...+.. .......+.
T Consensus 161 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 235 (286)
T cd07846 161 VATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSD----IDQLYH-IIKCLGNLIPRHQEIFQKNPLFA 235 (286)
T ss_pred cceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCch----HHHHHH-HHHHhCCCchhhHHHhccchHhh
Confidence 4677899999865545678999999999999999999999864221 111111 000000000
Q ss_pred cccChhhhhhh----hHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 534 EVIDPALVKEI----HAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 534 ~~~d~~~~~~~----~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
....+...... ........+.+++.+||+.+|++||++.++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 236 GMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred ccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 00000000000 00012345778999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.3e-25 Score=217.99 Aligned_cols=206 Identities=17% Similarity=0.253 Sum_probs=144.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC----cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC--Cce
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD----ATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN--DEK 420 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~----~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~--~~~ 420 (584)
.+.||+|+||.||+|.....+ ..||+|++.... .....+.+.+|+.++++++||||+++++++.+. +..
T Consensus 7 ~~~lg~g~~g~vy~~~~~~~~-----~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 7 GKLLGQGAFGRVYLCYDVDTG-----RELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred cceecCCCCEEEEEEEEcCCC-----cEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 467999999999999987655 799999986532 122346789999999999999999999998763 567
Q ss_pred eEeeecccCCcHHHHHhc-------------------------cc--ccccCCCCccccccCeEEecCCCcc--------
Q 007935 421 LLISDFIRNGSLYAALHG-------------------------FG--LNRLLPGTSKVTKNETIVTSGTGSR-------- 465 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~~L~~-------------------------~g--~~~~~~~~~~i~~~~~~~~~~~~~~-------- 465 (584)
+++|||+++++|.++++. .+ |+++.+.|+.+..+...+..+++..
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 161 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICM 161 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCccccccccc
Confidence 899999999999776643 22 3455555555555555666665532
Q ss_pred ------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhc-CCCCccccCh
Q 007935 466 ------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE-RRPLSEVIDP 538 (584)
Q Consensus 466 ------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~d~ 538 (584)
...++..|+|||++. +..++.++|||||||++|||++|+.||..... ........... ...++..+++
T Consensus 162 ~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 236 (266)
T cd06651 162 SGTGIRSVTGTPYWMSPEVIS-GEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA----MAAIFKIATQPTNPQLPSHISE 236 (266)
T ss_pred cCCccccCCccccccCHHHhC-CCCCCchhhhHHHHHHHHHHHHCCCCccccch----HHHHHHHhcCCCCCCCchhcCH
Confidence 124677899999854 46789999999999999999999999974321 12111111111 1111122222
Q ss_pred hhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 539 ALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 539 ~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+ .+++ .||..+|++||+|+||++
T Consensus 237 ~~-------------~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 237 HA-------------RDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred HH-------------HHHH-HHhcCChhhCcCHHHHhc
Confidence 22 2233 588899999999999975
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-25 Score=224.23 Aligned_cols=205 Identities=19% Similarity=0.266 Sum_probs=151.4
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeecc
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 427 (584)
..||+|+||.||++.....+ ..||||.+.... ....+.+.+|+.++++++||||+++++.+...+..++||||+
T Consensus 28 ~~lg~g~~g~v~~~~~~~~~-----~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 101 (292)
T cd06658 28 IKIGEGSTGIVCIATEKHTG-----KQVAVKKMDLRK-QQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFL 101 (292)
T ss_pred hcccCCCCeEEEEEEECCCC-----CEEEEEEEecch-HHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCC
Confidence 45999999999999886655 799999987643 233477999999999999999999999999999999999999
Q ss_pred cCCcHHHHH------------------------hccc--ccccCCCCccccccCeEEecCCCcc-----------cccCC
Q 007935 428 RNGSLYAAL------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSR-----------ISAIS 470 (584)
Q Consensus 428 ~~GsL~~~L------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~~gt 470 (584)
++++|.+++ |+.| |+++.+.|..+..+...+..+++.. ...|+
T Consensus 102 ~~~~L~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~ 181 (292)
T cd06658 102 EGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGT 181 (292)
T ss_pred CCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCceeecC
Confidence 999997665 3333 4666666766666666666666532 13578
Q ss_pred CcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcC-CCC--ccccChhhhhhhhHH
Q 007935 471 NVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER-RPL--SEVIDPALVKEIHAK 547 (584)
Q Consensus 471 ~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~-~~~--~~~~d~~~~~~~~~~ 547 (584)
..|+|||+.. +..++.++|||||||++|||++|+.||..... . .......... ... ...+++
T Consensus 182 ~~y~aPE~~~-~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~--------- 246 (292)
T cd06658 182 PYWMAPEVIS-RLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPP----L-QAMRRIRDNLPPRVKDSHKVSS--------- 246 (292)
T ss_pred ccccCHHHHc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----H-HHHHHHHhcCCCccccccccCH---------
Confidence 8899999854 46789999999999999999999999874221 1 1111111111 100 011111
Q ss_pred HHHHHHHHHHhcccCCCCCCCCChHHHHHH
Q 007935 548 RQVLATFHIALNCTELDPEFRPRMRTVSES 577 (584)
Q Consensus 548 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 577 (584)
.+.+++..||..||.+|||+.|+++.
T Consensus 247 ----~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 247 ----VLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred ----HHHHHHHHHccCChhHCcCHHHHhhC
Confidence 34456777999999999999999863
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-25 Score=222.65 Aligned_cols=223 Identities=15% Similarity=0.154 Sum_probs=150.8
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
+.||+|+||.||+|+....+ ..||+|+++... .....+.+.+|++++++++||||+++++++.+.+..++|+||
T Consensus 6 ~~l~~g~~~~vy~~~~~~~g-----~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 6 EKIGEGTYGTVFKAKNRETH-----EIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred EEecccCCeEEEEEEECCCC-----cEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 56999999999999987765 789999997542 222235788999999999999999999999999999999999
Q ss_pred ccCCcHHHHHh--------------------------ccc--ccccCCCCccccccCeEEecCCCccc-----------c
Q 007935 427 IRNGSLYAALH--------------------------GFG--LNRLLPGTSKVTKNETIVTSGTGSRI-----------S 467 (584)
Q Consensus 427 ~~~GsL~~~L~--------------------------~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~-----------~ 467 (584)
+++ +|.++++ ..| |+++.+.|+.+..++.++..+++... .
T Consensus 81 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 159 (284)
T cd07839 81 CDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSAE 159 (284)
T ss_pred CCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCCC
Confidence 974 6755543 333 56666777766666667776665322 2
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHh----------hcCCCC--ccc
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF----------RERRPL--SEV 535 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~----------~~~~~~--~~~ 535 (584)
.++..|+|||++.....++.++|||||||++|||+||+.|+.........+....+... ...... ...
T Consensus 160 ~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd07839 160 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPM 239 (284)
T ss_pred ccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCC
Confidence 45778999998655455799999999999999999999986532221111111111000 000000 000
Q ss_pred cChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 536 IDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 536 ~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.................+.+++.+||+.||.+|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 240 YPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred CCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 00000000000011235667899999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.5e-25 Score=219.90 Aligned_cols=205 Identities=17% Similarity=0.271 Sum_probs=154.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||++.....+ +.||+|.+.... .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 6 ~~~ig~g~~~~vy~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 6 IKTLGTGSFGRVMLVRHKGSG-----KYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred EEEeecCCCeEEEEEEEcCCC-----CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 467999999999999987765 799999987542 2233467899999999999999999999999999999999
Q ss_pred ecccCCcHHHHHhc-------------------------cc--ccccCCCCccccccCeEEecCCCcc--------cccC
Q 007935 425 DFIRNGSLYAALHG-------------------------FG--LNRLLPGTSKVTKNETIVTSGTGSR--------ISAI 469 (584)
Q Consensus 425 Ey~~~GsL~~~L~~-------------------------~g--~~~~~~~~~~i~~~~~~~~~~~~~~--------~~~g 469 (584)
||+++|+|.++++. .| |.++.+.|+.+..++.++..+++.. ...+
T Consensus 81 e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 160 (290)
T cd05580 81 EYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYTLCG 160 (290)
T ss_pred ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCCCCCCCC
Confidence 99999999766642 22 4566666766666666666665532 2357
Q ss_pred CCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHHH
Q 007935 470 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQ 549 (584)
Q Consensus 470 t~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 549 (584)
+..|+|||.+.. ...+.++||||||+++|||++|+.||.... ..............++..+++.+
T Consensus 161 ~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l--------- 225 (290)
T cd05580 161 TPEYLAPEIILS-KGYGKAVDWWALGILIYEMLAGYPPFFDDN-----PIQIYEKILEGKVRFPSFFSPDA--------- 225 (290)
T ss_pred CccccChhhhcC-CCCCccccHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHhcCCccCCccCCHHH---------
Confidence 888999998554 578899999999999999999999997432 22222333333333344444444
Q ss_pred HHHHHHHHhcccCCCCCCCC-----ChHHHH
Q 007935 550 VLATFHIALNCTELDPEFRP-----RMRTVS 575 (584)
Q Consensus 550 ~~~~~~l~~~Cl~~~P~~RP-----t~~ev~ 575 (584)
.+++.+||+.||.+|| +++|++
T Consensus 226 ----~~li~~~l~~~p~~R~~~~~~~~~~l~ 252 (290)
T cd05580 226 ----KDLIRNLLQVDLTKRLGNLKNGVNDIK 252 (290)
T ss_pred ----HHHHHHHccCCHHHccCcccCCHHHHH
Confidence 3466679999999998 666665
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.8e-26 Score=228.86 Aligned_cols=159 Identities=21% Similarity=0.292 Sum_probs=128.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC--CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG--DATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+++....+ +.||||.+.+. ......+.|.+|+.++..++||||+++++++.+++..++||
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 6 LKVIGRGAFGEVAVVKMKNTG-----QVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred EEEEEecCCeEEEEEEECCCC-----CEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 467999999999999988765 79999999753 12223466899999999999999999999999999999999
Q ss_pred ecccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc----------
Q 007935 425 DFIRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 425 Ey~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
||+++|+|.+++.. . .|+++++.|+.+..++.++..++|...
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 160 (331)
T cd05597 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQS 160 (331)
T ss_pred ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCccc
Confidence 99999999877643 2 256777777777666767776665321
Q ss_pred --ccCCCcccCcccccc----CCCCCCccchhhHHHHHHHHHhCCCCCCC
Q 007935 467 --SAISNVYLAPEARIY----GSKFTQKCDVYSFGIVLLEILTGRLPDAG 510 (584)
Q Consensus 467 --~~gt~~y~aPE~~~~----~~~~~~ksDV~SfGvvl~ElltG~~p~~~ 510 (584)
..||+.|||||++.. ...++.++|||||||++|||++|+.||..
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~ 210 (331)
T cd05597 161 NVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred cceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCC
Confidence 258999999998642 24578899999999999999999999974
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.5e-26 Score=220.83 Aligned_cols=214 Identities=22% Similarity=0.367 Sum_probs=159.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchh-hHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWR-FKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~-~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||+||+++....+ +.||+|.+........ .....+|+.++++++||||+++++++.+.+..++|||
T Consensus 4 ~~~lg~G~~g~v~~~~~~~~~-----~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~ 78 (260)
T PF00069_consen 4 VKKLGSGGFGTVYKAKNKKNG-----QKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVME 78 (260)
T ss_dssp EEEEEEESSEEEEEEEETTTT-----EEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEE
T ss_pred eEEEEeCCCEEEEEEEECCCC-----eEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccc
Confidence 467999999999999998886 7999999988643322 2344669999999999999999999999999999999
Q ss_pred cccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCccc-----------c
Q 007935 426 FIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI-----------S 467 (584)
Q Consensus 426 y~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~-----------~ 467 (584)
|+++++|.+++. .. -|.++.+.|+.+..++.++..+++... .
T Consensus 79 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 158 (260)
T PF00069_consen 79 YCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNPF 158 (260)
T ss_dssp EETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSSS
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999987775 12 367788888888777777777766432 3
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHH
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAK 547 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 547 (584)
.++..|+|||++..+..++.++||||+|+++|||++|+.||.... ................. .... ...
T Consensus 159 ~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~------~~~~---~~~ 227 (260)
T PF00069_consen 159 VGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESN--SDDQLEIIEKILKRPLP------SSSQ---QSR 227 (260)
T ss_dssp SSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSS--HHHHHHHHHHHHHTHHH------HHTT---SHT
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccc--chhhhhhhhhccccccc------cccc---ccc
Confidence 578889999995535789999999999999999999999998531 01111112111111000 0000 000
Q ss_pred HHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 548 RQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 548 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.....+.+++..||+.||++||++.++++
T Consensus 228 ~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 228 EKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp TSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred hhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00146677888999999999999999975
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.1e-25 Score=217.42 Aligned_cols=209 Identities=21% Similarity=0.331 Sum_probs=149.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc-----chhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCcee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-----TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKL 421 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~-----~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~ 421 (584)
.+.||+|++|.||++....++ ..||+|.+..... ....+.+.+|++++++++|+|||++++++.+.+..+
T Consensus 5 ~~~lg~g~~~~v~~~~~~~~~-----~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 79 (268)
T cd06630 5 GQQLGTGAFSSCYQARDVKTG-----TLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFN 79 (268)
T ss_pred cceecCcCceEEEEEEEcCCC-----cEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEE
Confidence 467999999999999876655 7899999875421 113467999999999999999999999999999999
Q ss_pred EeeecccCCcHHHHHhc-------------------------cc--ccccCCCCccccccC-eEEecCCCcc--------
Q 007935 422 LISDFIRNGSLYAALHG-------------------------FG--LNRLLPGTSKVTKNE-TIVTSGTGSR-------- 465 (584)
Q Consensus 422 lV~Ey~~~GsL~~~L~~-------------------------~g--~~~~~~~~~~i~~~~-~~~~~~~~~~-------- 465 (584)
+||||+++++|.+++.. .| |.++.+.|+.+..++ .++..+++..
T Consensus 80 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~ 159 (268)
T cd06630 80 LFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGT 159 (268)
T ss_pred EEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEcccccccccccccc
Confidence 99999999999766643 22 345555555554333 3555555422
Q ss_pred -------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhc--CCCCcccc
Q 007935 466 -------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE--RRPLSEVI 536 (584)
Q Consensus 466 -------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~ 536 (584)
...++..|+|||++. +..++.++||||+|+++|||++|+.||...... ............ ....++.+
T Consensus 160 ~~~~~~~~~~~~~~~~~PE~~~-~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 236 (268)
T cd06630 160 GAGEFQGQLLGTIAFMAPEVLR-GEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHS--NHLALIFKIASATTAPSIPEHL 236 (268)
T ss_pred cCCccccccccccceeCHhHhc-cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCc--chHHHHHHHhccCCCCCCchhh
Confidence 124677899999854 467899999999999999999999999643221 111111111111 11112222
Q ss_pred ChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 537 DPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 537 d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
++ ++.+++.+|++.+|++||++.|+++
T Consensus 237 ~~-------------~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 237 SP-------------GLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred CH-------------HHHHHHHHHcCCCcccCcCHHHHhc
Confidence 22 3445777899999999999999874
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.1e-25 Score=220.81 Aligned_cols=223 Identities=19% Similarity=0.277 Sum_probs=153.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|++|.||+|....++ +.||||+++... .....+.+.+|++++++++|+||+++++++.+++..++|||
T Consensus 6 ~~~i~~g~~~~v~~~~~~~~~-----~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 6 LGVVGEGAYGVVLKCRNKATG-----EIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred EEEecccCCeeEEEEEeCCCC-----cEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 467999999999999988765 799999987642 22334789999999999999999999999999999999999
Q ss_pred cccCCcHHH-------------------------HHhccc--ccccCCCCccccccCeEEecCCCcc------------c
Q 007935 426 FIRNGSLYA-------------------------ALHGFG--LNRLLPGTSKVTKNETIVTSGTGSR------------I 466 (584)
Q Consensus 426 y~~~GsL~~-------------------------~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~------------~ 466 (584)
|++++.+.. +||..| |+++.+.|+.+..+..++..+++.. .
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~ 160 (288)
T cd07833 81 YVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTD 160 (288)
T ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCccccccC
Confidence 999877643 334333 4555566666655566666555421 2
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhc-----------CC-----
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE-----------RR----- 530 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~-----------~~----- 530 (584)
..++..|+|||++.....++.++||||||+++|||++|+.||...... ..+.. ....... ..
T Consensus 161 ~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T cd07833 161 YVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDI-DQLYL-IQKCLGPLPPSHQELFSSNPRFAGV 238 (288)
T ss_pred cccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHH-HHHHhCCCCHHHhhhcccCcccccc
Confidence 345778999999665337899999999999999999999998743211 00111 0010000 00
Q ss_pred CCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 531 PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 531 ~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+..++.............++.+++.+||+.+|++|||++++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 239 AFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred ccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 0011111111110011112456788999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.8e-26 Score=206.58 Aligned_cols=211 Identities=17% Similarity=0.242 Sum_probs=162.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc---ch----hhHhHHHHHHHHHhc-CCCceeeeeEEEEeCC
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA---TW----RFKDFESEVEAIARV-QHPNIVRLKAFYYAND 418 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~---~~----~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~ 418 (584)
.+++|+|..++|.++..+.++ +..|+|++..... .. ..+.-.+|+.||+++ .||+|+++.++|+.+.
T Consensus 22 keilgrgvss~vrRci~k~t~-----~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~s 96 (411)
T KOG0599|consen 22 KEILGRGVSSVVRRCIHKETG-----KEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDA 96 (411)
T ss_pred HHHhcccchhhhhhhhhcccc-----cceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcc
Confidence 467999999999999998887 7899999865421 11 134456899999999 7999999999999999
Q ss_pred ceeEeeecccCCcHHHHHhc---------------------------ccccccCCCCccccccCeEEecCCCccc-----
Q 007935 419 EKLLISDFIRNGSLYAALHG---------------------------FGLNRLLPGTSKVTKNETIVTSGTGSRI----- 466 (584)
Q Consensus 419 ~~~lV~Ey~~~GsL~~~L~~---------------------------~g~~~~~~~~~~i~~~~~~~~~~~~~~~----- 466 (584)
..++|+|.|+.|.|++||.+ ..|+|++++|+...++..++.++||.+.
T Consensus 97 F~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~G 176 (411)
T KOG0599|consen 97 FVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQLEPG 176 (411)
T ss_pred hhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeeccCCc
Confidence 99999999999999999853 2579999999998888999998887432
Q ss_pred -----ccCCCcccCccccc-----cCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCcccc
Q 007935 467 -----SAISNVYLAPEARI-----YGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVI 536 (584)
Q Consensus 467 -----~~gt~~y~aPE~~~-----~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 536 (584)
.+||++|+|||.+. ....|+..+|+||.||+||.|+.|.+||... .-.-+.+....+... .-
T Consensus 177 ekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHR-----kQmlMLR~ImeGkyq---F~ 248 (411)
T KOG0599|consen 177 EKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHR-----KQMLMLRMIMEGKYQ---FR 248 (411)
T ss_pred hhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHH-----HHHHHHHHHHhcccc---cC
Confidence 48999999999753 2246889999999999999999999998631 111122333333322 22
Q ss_pred ChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 537 DPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 537 d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+|++.+ ....+.+++.+|++.||.+|.|++|+++
T Consensus 249 speWad------is~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 249 SPEWAD------ISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred Ccchhh------ccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 333321 1224456778899999999999999985
|
|
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.4e-25 Score=230.06 Aligned_cols=219 Identities=17% Similarity=0.199 Sum_probs=151.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
...||+|+||.||++...+.. ....||||.+... +.+.+|++++++++|||||++++++...+..++||||
T Consensus 97 ~~~Lg~G~~g~Vy~~~~~~~~---~~~~v~vK~~~~~------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~ 167 (392)
T PHA03207 97 LSSLTPGSEGEVFVCTKHGDE---QRKKVIVKAVTGG------KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPK 167 (392)
T ss_pred EEeecCCCCeEEEEEEEcCCc---cceeEEEEecccc------ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehh
Confidence 467999999999999764321 2278999988653 3456899999999999999999999999999999999
Q ss_pred ccCCcHHHHH-------------------------hccc--ccccCCCCccccccCeEEecCCCcc-------------c
Q 007935 427 IRNGSLYAAL-------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSR-------------I 466 (584)
Q Consensus 427 ~~~GsL~~~L-------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~-------------~ 466 (584)
+. ++|.+++ |+.| |+++++.|+.+..++.++..++|.. .
T Consensus 168 ~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~~ 246 (392)
T PHA03207 168 YK-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYG 246 (392)
T ss_pred cC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCcccccccccc
Confidence 96 5675544 4333 5777888887777777777777642 1
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCC--CcHHHHHHHHhhcCCCCccccChhhh---
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDG--KGLESLVRKAFRERRPLSEVIDPALV--- 541 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~d~~~~--- 541 (584)
..||..|+|||++. +..++.++|||||||++|||++|+.||.+..... ..+....+........++......+.
T Consensus 247 ~~gt~~y~aPE~~~-~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~ 325 (392)
T PHA03207 247 WSGTLETNSPELLA-LDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHF 325 (392)
T ss_pred cccccCccCHhHhc-CCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHH
Confidence 35899999999954 4679999999999999999999999997643321 11111111110000000000000000
Q ss_pred --------------hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 542 --------------KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 542 --------------~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
..+........+.+++.+|+..||++|||+.|++.
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~ 374 (392)
T PHA03207 326 KQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILS 374 (392)
T ss_pred HhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhh
Confidence 00000011234567888999999999999999985
|
|
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.6e-25 Score=225.96 Aligned_cols=159 Identities=21% Similarity=0.304 Sum_probs=129.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+++...++ +.||+|.+.+.. .....+.|.+|+.++..++|+||+++++++.+.+..++||
T Consensus 6 ~~~lG~G~fg~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 6 LKVIGRGAFGEVAVVKLKNAD-----KVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred EEEEEeCCCeEEEEEEECCCC-----CEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 467999999999999988765 789999986531 2222356889999999999999999999999999999999
Q ss_pred ecccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCcc-----------
Q 007935 425 DFIRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSR----------- 465 (584)
Q Consensus 425 Ey~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~----------- 465 (584)
||+++|+|.++++. . -|+++++.|+.+..+..++..++|..
T Consensus 81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~~ 160 (332)
T cd05623 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQS 160 (332)
T ss_pred eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCCccee
Confidence 99999999887753 1 35777777877776677777776632
Q ss_pred -cccCCCcccCcccccc----CCCCCCccchhhHHHHHHHHHhCCCCCCC
Q 007935 466 -ISAISNVYLAPEARIY----GSKFTQKCDVYSFGIVLLEILTGRLPDAG 510 (584)
Q Consensus 466 -~~~gt~~y~aPE~~~~----~~~~~~ksDV~SfGvvl~ElltG~~p~~~ 510 (584)
...||+.|||||++.. ...++.++|||||||++|||++|+.||..
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~ 210 (332)
T cd05623 161 SVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYA 210 (332)
T ss_pred cccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCC
Confidence 1368999999998642 24688999999999999999999999974
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.5e-25 Score=217.08 Aligned_cols=211 Identities=18% Similarity=0.274 Sum_probs=154.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|....++ +.+|+|.+...... ..+.+.+|++++++++||||+++++++.+.+..+++|||
T Consensus 8 ~~~l~~g~~~~v~~~~~~~~~-----~~~~ik~~~~~~~~-~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~ 81 (262)
T cd06613 8 IQRIGSGTYGDVYKARDIATG-----ELVAIKVIKLEPGD-DFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY 81 (262)
T ss_pred EEEecCCCceEEEEeEecCCC-----CEEEEEEEEcCchh-hHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence 357999999999999987765 78999999865332 457899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHh--------------------------cc--cccccCCCCccccccCeEEecCCCccc-----------c
Q 007935 427 IRNGSLYAALH--------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI-----------S 467 (584)
Q Consensus 427 ~~~GsL~~~L~--------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~-----------~ 467 (584)
+++++|.++++ +. -|.++.+.|+.+..++..+..+++... .
T Consensus 82 ~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~ 161 (262)
T cd06613 82 CGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSF 161 (262)
T ss_pred CCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhhhccccc
Confidence 99999976653 22 245666677767766667777765321 2
Q ss_pred cCCCcccCccccccC--CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhh
Q 007935 468 AISNVYLAPEARIYG--SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIH 545 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~--~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~ 545 (584)
.++..|+|||..... ..++.++|||||||++|||+||+.||...... .... ..............
T Consensus 162 ~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~----~~~~-~~~~~~~~~~~~~~-------- 228 (262)
T cd06613 162 IGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPM----RALF-LISKSNFPPPKLKD-------- 228 (262)
T ss_pred cCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHH----HHHH-HHHhccCCCccccc--------
Confidence 567789999985432 26889999999999999999999998753211 1111 11111000001000
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 546 AKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.......+.+++.+||..+|.+|||+.+|+.
T Consensus 229 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 229 KEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred hhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0112235678899999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.1e-26 Score=233.45 Aligned_cols=161 Identities=25% Similarity=0.336 Sum_probs=132.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC------Cce
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN------DEK 420 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~------~~~ 420 (584)
.+.||+|+||.||+|+.+..| ..||||.++.......++...+|+++|++++|||||++++.=.+. ...
T Consensus 18 ~e~LG~Ga~g~V~rgrnketG-----~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~ 92 (732)
T KOG4250|consen 18 DERLGKGAFGNVYRGRNKETG-----RLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLP 92 (732)
T ss_pred hhhhcCCccceeeeecccccc-----cchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccc
Confidence 457999999999999988776 899999998865555568899999999999999999999876553 367
Q ss_pred eEeeecccCCcHHHHHh----------------------------cc--cccccCCCCccccccC----eEEecCCCccc
Q 007935 421 LLISDFIRNGSLYAALH----------------------------GF--GLNRLLPGTSKVTKNE----TIVTSGTGSRI 466 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~~L~----------------------------~~--g~~~~~~~~~~i~~~~----~~~~~~~~~~~ 466 (584)
.+|||||++|||+..|. +. .|+|++++|+.+...+ .++..|+|.+.
T Consensus 93 vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Ar 172 (732)
T KOG4250|consen 93 VLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAAR 172 (732)
T ss_pred eEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccc
Confidence 89999999999976654 22 4789999998654442 34456776432
Q ss_pred ----------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCC
Q 007935 467 ----------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPE 512 (584)
Q Consensus 467 ----------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~ 512 (584)
.+||..|.+||.+.+...|+..+|.|||||++||.+||..||....
T Consensus 173 el~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~ 228 (732)
T KOG4250|consen 173 ELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFG 228 (732)
T ss_pred cCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCC
Confidence 4799999999997754689999999999999999999999997543
|
|
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=99.93 E-value=4e-25 Score=219.55 Aligned_cols=220 Identities=18% Similarity=0.228 Sum_probs=148.4
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
+.||+|++|.||+|+....+ +.||||+++... .....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 6 EKIGEGTYGVVYKARNKLTG-----EVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred eeecCCCceEEEEEEECCCC-----CEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 56899999999999987655 789999987542 222336789999999999999999999999999999999999
Q ss_pred ccCCcHHHHH---------------------------hccc--ccccCCCCccccccCeEEecCCCccc-----------
Q 007935 427 IRNGSLYAAL---------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSRI----------- 466 (584)
Q Consensus 427 ~~~GsL~~~L---------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~----------- 466 (584)
+. ++|.+++ |+.| |+++.+.|+.+..+...+..+++...
T Consensus 81 ~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~ 159 (284)
T cd07860 81 LH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 159 (284)
T ss_pred cc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCcccccc
Confidence 96 5675554 3333 45555666666666666666654321
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC--------------CC
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR--------------PL 532 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~--------------~~ 532 (584)
..++..|+|||++.....++.++|||||||++|||+||+.||...... .......+..-.... .+
T Consensus 160 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd07860 160 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSLPDYKPSF 238 (284)
T ss_pred ccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHHhCCCChhhhhhhhHHHHHHhhc
Confidence 235678999998655445688999999999999999999999742211 111111111000000 00
Q ss_pred ccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 533 SEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 533 ~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.......+.... ......+.+++.+||+.||++|||++|+++
T Consensus 239 ~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 239 PKWARQDFSKVV--PPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred ccccccCHHHHc--ccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 000000000000 001134567899999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.1e-26 Score=226.42 Aligned_cols=208 Identities=17% Similarity=0.254 Sum_probs=148.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC-CcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+||.+.||++...+. +.+|+|++... .+......|.+|++.|.+| .|.+||+|++|-..++..|+||
T Consensus 366 lk~iG~GGSSkV~kV~~s~~------~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvm 439 (677)
T KOG0596|consen 366 LKQIGSGGSSKVFKVLNSDK------QIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVM 439 (677)
T ss_pred HHhhcCCCcceeeeeecCCC------cchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEe
Confidence 45799999999999998776 68888887654 4445568899999999999 6999999999999999999999
Q ss_pred ecccCCcHHHHHh----------------------------cccccccCCCCccccccCeEEecCCCcc-----------
Q 007935 425 DFIRNGSLYAALH----------------------------GFGLNRLLPGTSKVTKNETIVTSGTGSR----------- 465 (584)
Q Consensus 425 Ey~~~GsL~~~L~----------------------------~~g~~~~~~~~~~i~~~~~~~~~~~~~~----------- 465 (584)
||-+. +|..+|. +..|.|+++.|..+. .+.++..|||..
T Consensus 440 E~Gd~-DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTTsI~ 517 (677)
T KOG0596|consen 440 ECGDI-DLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTTSIV 517 (677)
T ss_pred ecccc-cHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE-eeeEEeeeechhcccCcccccee
Confidence 98654 6644442 234688888776443 345555566522
Q ss_pred --cccCCCcccCccccccC----------CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCc
Q 007935 466 --ISAISNVYLAPEARIYG----------SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLS 533 (584)
Q Consensus 466 --~~~gt~~y~aPE~~~~~----------~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 533 (584)
..+||..||+||.+... -+.+.+|||||+||+||+|+.|+.||.. +.....+. .
T Consensus 518 kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~-------~~n~~aKl-------~ 583 (677)
T KOG0596|consen 518 KDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQ-------IINQIAKL-------H 583 (677)
T ss_pred eccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHH-------HHHHHHHH-------H
Confidence 24899999999975421 1356899999999999999999999963 22111111 1
Q ss_pred cccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 534 EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 534 ~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.||...-.+.....-.+++++|..||+.||++|||+.|+++
T Consensus 584 aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 584 AITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred hhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 2222211000000001123788999999999999999999986
|
|
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-24 Score=213.73 Aligned_cols=210 Identities=21% Similarity=0.357 Sum_probs=151.1
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcc-hhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-WRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~-~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|.....+ +.||+|.++..... ...+.+.+|++++++++|+||+++++++.+.+..++|+|
T Consensus 5 ~~~lg~G~~~~v~~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06626 5 GNKIGGGTFGKVYTAVNLDTG-----ELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFME 79 (264)
T ss_pred eeEeecCCCcEEEEEEECCCC-----cEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEe
Confidence 357999999999999987655 79999999865332 345789999999999999999999999999999999999
Q ss_pred cccCCcHHHHHhc-------------------------cc--ccccCCCCccccccCeEEecCCCccc------------
Q 007935 426 FIRNGSLYAALHG-------------------------FG--LNRLLPGTSKVTKNETIVTSGTGSRI------------ 466 (584)
Q Consensus 426 y~~~GsL~~~L~~-------------------------~g--~~~~~~~~~~i~~~~~~~~~~~~~~~------------ 466 (584)
|+++++|.++++. .| |.++.+.|+.+..+..++..+++...
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~ 159 (264)
T cd06626 80 YCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEE 159 (264)
T ss_pred cCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCccccc
Confidence 9999999877643 22 34455556555555556666654221
Q ss_pred ---ccCCCcccCccccccCCC---CCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhh
Q 007935 467 ---SAISNVYLAPEARIYGSK---FTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPAL 540 (584)
Q Consensus 467 ---~~gt~~y~aPE~~~~~~~---~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~ 540 (584)
..++..|+|||++.. .. ++.++||||||+++||+++|+.||...... ..............++...
T Consensus 160 ~~~~~~~~~~~~PE~~~~-~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~---~~~~~~~~~~~~~~~~~~~---- 231 (264)
T cd06626 160 VQSLAGTPAYMAPEVITG-GKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE---FQIMFHVGAGHKPPIPDSL---- 231 (264)
T ss_pred ccCCcCCcCccChhhccC-CCCCCCCcccchHHHHHHHHHHHhCCCCccCCcch---HHHHHHHhcCCCCCCCccc----
Confidence 246778999998544 34 789999999999999999999999753211 1111111111111111111
Q ss_pred hhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 541 VKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 541 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.....+.+++.+||+.+|++|||+.|++.
T Consensus 232 -------~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 232 -------QLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred -------ccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00123446778899999999999999874
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.6e-25 Score=214.83 Aligned_cols=205 Identities=21% Similarity=0.285 Sum_probs=150.7
Q ss_pred ceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeecc
Q 007935 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (584)
Q Consensus 350 iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 427 (584)
||+|++|.||+++....+ +.||+|.+.... .....+.+.+|++++++++||||+++++++.+++..++||||+
T Consensus 1 lg~g~~~~v~~~~~~~~~-----~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 75 (262)
T cd05572 1 LGVGGFGRVELVKVKSKN-----RTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYC 75 (262)
T ss_pred CCCCCceEEEEEEECCCC-----cEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecC
Confidence 689999999999987654 799999997642 2233478999999999999999999999999999999999999
Q ss_pred cCCcHHHHHhcc---------------------------cccccCCCCccccccCeEEecCCCcc----------cccCC
Q 007935 428 RNGSLYAALHGF---------------------------GLNRLLPGTSKVTKNETIVTSGTGSR----------ISAIS 470 (584)
Q Consensus 428 ~~GsL~~~L~~~---------------------------g~~~~~~~~~~i~~~~~~~~~~~~~~----------~~~gt 470 (584)
++|+|.++++.. -|.++.+.|+.+..++.++..+++.. ...++
T Consensus 76 ~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~~ 155 (262)
T cd05572 76 LGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGT 155 (262)
T ss_pred CCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccCC
Confidence 999998777532 23445555555555566666555432 13467
Q ss_pred CcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhh--cCCCCccccChhhhhhhhHHH
Q 007935 471 NVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR--ERRPLSEVIDPALVKEIHAKR 548 (584)
Q Consensus 471 ~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~ 548 (584)
..|++||.+. +..++.++||||||+++|||++|..||.....+ .......... .....+...++
T Consensus 156 ~~~~~PE~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~---------- 221 (262)
T cd05572 156 PEYVAPEIIL-NKGYDFSVDYWSLGILLYELLTGRPPFGEDDED---PMEIYNDILKGNGKLEFPNYIDK---------- 221 (262)
T ss_pred cCccChhHhc-CCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCC---HHHHHHHHhccCCCCCCCcccCH----------
Confidence 8899999854 467899999999999999999999999754321 2233333331 12222222222
Q ss_pred HHHHHHHHHhcccCCCCCCCCC-----hHHHHH
Q 007935 549 QVLATFHIALNCTELDPEFRPR-----MRTVSE 576 (584)
Q Consensus 549 ~~~~~~~l~~~Cl~~~P~~RPt-----~~ev~~ 576 (584)
.+.+++.+||+.+|++||+ +.|+++
T Consensus 222 ---~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 222 ---AAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred ---HHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 3456777899999999999 666654
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-24 Score=214.99 Aligned_cols=216 Identities=23% Similarity=0.390 Sum_probs=153.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCC------c
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYAND------E 419 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~------~ 419 (584)
.+.||+|+||.||+|.+....+ ..+.||||++.... .....+++.+|++++++++||||+++++++...+ .
T Consensus 4 ~~~ig~g~~g~v~~~~~~~~~~--~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 81 (273)
T cd05074 4 GRMLGKGEFGSVREAQLKSEDG--SFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPI 81 (273)
T ss_pred hhcccCCCCCCEEeeEeeccCC--CceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccc
Confidence 3579999999999998765321 12789999997652 3334577999999999999999999999986543 2
Q ss_pred eeEeeecccCCcHHHHH-------------------------------hccc--ccccCCCCccccccCeEEecCCCccc
Q 007935 420 KLLISDFIRNGSLYAAL-------------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSRI 466 (584)
Q Consensus 420 ~~lV~Ey~~~GsL~~~L-------------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~ 466 (584)
.++++||+++|+|.+++ |+.| |+++.+.|+.+..+..++..+++...
T Consensus 82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~~ 161 (273)
T cd05074 82 PMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLSK 161 (273)
T ss_pred eEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECcccccc
Confidence 47899999999986554 2223 46667777777666666666665322
Q ss_pred -------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCCC
Q 007935 467 -------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPL 532 (584)
Q Consensus 467 -------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 532 (584)
..++..|++||.+.. ..++.++|||||||++|||++ |+.||..... ............ .
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~sDi~slG~il~el~~~g~~p~~~~~~-----~~~~~~~~~~~~-~ 234 (273)
T cd05074 162 KIYSGDYYRQGCASKLPVKWLALESLAD-NVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN-----SEIYNYLIKGNR-L 234 (273)
T ss_pred cccCCcceecCCCccCchhhcCHhHHhc-CccchhhhhHHHHHHHHHHhhCCCCCCCCCCH-----HHHHHHHHcCCc-C
Confidence 123467999998544 578999999999999999999 8888864221 222222211111 1
Q ss_pred ccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 533 SEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 533 ~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
. ..+. ....+.+++.+||+.+|++||++.|+++.|+++.
T Consensus 235 ~--~~~~---------~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~~ 273 (273)
T cd05074 235 K--QPPD---------CLEDVYELMCQCWSPEPKCRPSFQHLRDQLELIW 273 (273)
T ss_pred C--CCCC---------CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhhC
Confidence 1 0111 1125667888999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-24 Score=216.27 Aligned_cols=208 Identities=19% Similarity=0.242 Sum_probs=153.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|++|.||++.....+ +.||+|++..... ...+.+.+|+.++++++||||+++++++...+..++|+||
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~~-----~~~~iK~~~~~~~-~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~ 97 (285)
T cd06648 24 FVKIGEGSTGIVCIATDKSTG-----RQVAVKKMDLRKQ-QRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEF 97 (285)
T ss_pred ceEeccCCCeEEEEEEECCCC-----CEEEEEEEeccch-hHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEec
Confidence 358999999999999976654 7899999875422 2346789999999999999999999999999999999999
Q ss_pred ccCCcHHHHHh------------------------ccc--ccccCCCCccccccCeEEecCCCcc-----------cccC
Q 007935 427 IRNGSLYAALH------------------------GFG--LNRLLPGTSKVTKNETIVTSGTGSR-----------ISAI 469 (584)
Q Consensus 427 ~~~GsL~~~L~------------------------~~g--~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~~g 469 (584)
+++++|.+++. +.| |+++.+.|+.+..++.+...+++.. ...|
T Consensus 98 ~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~ 177 (285)
T cd06648 98 LEGGALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVG 177 (285)
T ss_pred cCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCcccccccC
Confidence 99999976653 223 5667777777766666666666421 1257
Q ss_pred CCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHHH
Q 007935 470 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQ 549 (584)
Q Consensus 470 t~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 549 (584)
+..|+|||+... ..++.++|||||||++|||++|+.||.... .............+... .+. ..
T Consensus 178 ~~~y~aPE~~~~-~~~~~~~Dv~slGv~l~ell~g~~p~~~~~-----~~~~~~~~~~~~~~~~~--~~~--------~~ 241 (285)
T cd06648 178 TPYWMAPEVISR-LPYGTEVDIWSLGIMVIEMVDGEPPYFNEP-----PLQAMKRIRDNLPPKLK--NLH--------KV 241 (285)
T ss_pred CccccCHHHhcC-CCCCCcccHHHHHHHHHHHHhCCCCCcCCC-----HHHHHHHHHhcCCCCCc--ccc--------cC
Confidence 888999998544 678999999999999999999999986421 12222222222111100 000 01
Q ss_pred HHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 550 VLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 550 ~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
...+.+++.+||+.+|++|||+.++++
T Consensus 242 ~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 242 SPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred CHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 124566888899999999999999985
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.5e-25 Score=214.56 Aligned_cols=207 Identities=14% Similarity=0.204 Sum_probs=146.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC----cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC--Cce
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD----ATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN--DEK 420 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~----~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~--~~~ 420 (584)
.+.||+|+||.||+|.....+ ..||||.+.... .....+.+.+|++++++++||||+++++++.+. ...
T Consensus 7 ~~~l~~g~~g~v~~~~~~~~~-----~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 7 GKLLGQGAFGRVYLCYDADTG-----RELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred eeEEecCCceEEEEEEEcCCC-----cEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 468999999999999987765 799999886431 122346789999999999999999999998764 457
Q ss_pred eEeeecccCCcHHHHHhc-------------------------cc--ccccCCCCccccccCeEEecCCCcc--------
Q 007935 421 LLISDFIRNGSLYAALHG-------------------------FG--LNRLLPGTSKVTKNETIVTSGTGSR-------- 465 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~~L~~-------------------------~g--~~~~~~~~~~i~~~~~~~~~~~~~~-------- 465 (584)
++||||+++|+|.+++.. .| |.++.+.|+.+..+...+..+++..
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~ 161 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICL 161 (265)
T ss_pred EEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCccccccccccc
Confidence 899999999999877643 22 3555556666655566666666532
Q ss_pred ------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChh
Q 007935 466 ------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPA 539 (584)
Q Consensus 466 ------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~ 539 (584)
...|+..|+|||++.. ..++.++|||||||++|||++|+.||.... ....... ...... .....+.
T Consensus 162 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~----~~~~~~~-~~~~~~--~~~~~~~ 233 (265)
T cd06652 162 SGTGMKSVTGTPYWMSPEVISG-EGYGRKADIWSVGCTVVEMLTEKPPWAEFE----AMAAIFK-IATQPT--NPVLPPH 233 (265)
T ss_pred cccccccCCCCccccChhhhcC-CCCCcchhHHHHHHHHHHHhhCCCCCCccc----hHHHHHH-HhcCCC--CCCCchh
Confidence 1347788999998554 678999999999999999999999997421 1222211 111110 1111111
Q ss_pred hhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 540 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
. ...+.+++.+|+. +|++||+++||++
T Consensus 234 ~---------~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 234 V---------SDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred h---------CHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 1 1233446666874 8999999999975
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-24 Score=218.47 Aligned_cols=208 Identities=21% Similarity=0.307 Sum_probs=151.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+++...++ ..||+|++.... .....+.+.+|++++++++|||+|++++++.+++..++||
T Consensus 30 ~~~lg~G~~~~v~~~~~~~~~-----~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 104 (317)
T cd06635 30 LREIGHGSFGAVYFARDVRTN-----EVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVM 104 (317)
T ss_pred hheeccCCCeEEEEEEEcCCC-----cEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEE
Confidence 356999999999999987665 799999987542 2233467899999999999999999999999999999999
Q ss_pred ecccCCcHHHHH--------------------------hccc--ccccCCCCccccccCeEEecCCCcc-------cccC
Q 007935 425 DFIRNGSLYAAL--------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSR-------ISAI 469 (584)
Q Consensus 425 Ey~~~GsL~~~L--------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~-------~~~g 469 (584)
||+++ +|.+++ |..| |+++.+.|+.+..+...+..+++.. ...|
T Consensus 105 e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 183 (317)
T cd06635 105 EYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPANSFVG 183 (317)
T ss_pred eCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCCcccccC
Confidence 99974 664443 3333 5667777777766666777776532 2357
Q ss_pred CCcccCccccc--cCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC-C-ccccChhhhhhhh
Q 007935 470 SNVYLAPEARI--YGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP-L-SEVIDPALVKEIH 545 (584)
Q Consensus 470 t~~y~aPE~~~--~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~-~-~~~~d~~~~~~~~ 545 (584)
+..|+|||++. .+..++.++|||||||++|||++|+.||.... .............+ . ...++
T Consensus 184 ~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-------- 250 (317)
T cd06635 184 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-----AMSALYHIAQNESPTLQSNEWS-------- 250 (317)
T ss_pred CccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCcc-----HHHHHHHHHhccCCCCCCcccc--------
Confidence 88899999853 23568899999999999999999999986421 11111111111111 0 11111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCChHHHHHHH
Q 007935 546 AKRQVLATFHIALNCTELDPEFRPRMRTVSESL 578 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L 578 (584)
..+.+++.+||+.+|.+||++.++++.+
T Consensus 251 -----~~l~~li~~~l~~~p~~Rpt~~~il~~~ 278 (317)
T cd06635 251 -----DYFRNFVDSCLQKIPQDRPTSEELLKHM 278 (317)
T ss_pred -----HHHHHHHHHHccCCcccCcCHHHHHhCh
Confidence 2345678889999999999999998754
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.8e-25 Score=216.67 Aligned_cols=204 Identities=20% Similarity=0.228 Sum_probs=146.5
Q ss_pred ceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeecc
Q 007935 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (584)
Q Consensus 350 iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 427 (584)
||+|+||+||++.....+ +.||+|.+.... .....+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 1 lg~g~~g~vy~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 75 (277)
T cd05577 1 LGKGGFGEVCACQVKATG-----KMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLM 75 (277)
T ss_pred CCCCCceeEEEEEEcCCC-----cEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecC
Confidence 689999999999887665 799999986542 2223456789999999999999999999999999999999999
Q ss_pred cCCcHHHHHhcc---------------------------c--ccccCCCCccccccCeEEecCCCcc----------ccc
Q 007935 428 RNGSLYAALHGF---------------------------G--LNRLLPGTSKVTKNETIVTSGTGSR----------ISA 468 (584)
Q Consensus 428 ~~GsL~~~L~~~---------------------------g--~~~~~~~~~~i~~~~~~~~~~~~~~----------~~~ 468 (584)
++|+|.++++.. | |.++.+.|+.+..++.++..+++.. ...
T Consensus 76 ~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 155 (277)
T cd05577 76 NGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRA 155 (277)
T ss_pred CCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCCcccccc
Confidence 999997776432 2 4555556666655666666666532 134
Q ss_pred CCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHH
Q 007935 469 ISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKR 548 (584)
Q Consensus 469 gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 548 (584)
++..|+|||++.. ..++.++|||||||++|||++|+.||...... .....+...........+..+++.+
T Consensus 156 ~~~~y~~PE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------- 225 (277)
T cd05577 156 GTPGYMAPEVLQG-EVYDFSVDWFALGCTLYEMIAGRSPFRQRKEK-VEKEELKRRTLEMAVEYPDKFSPEA-------- 225 (277)
T ss_pred CCCCcCCHHHhcC-CCCCchhhhHHHHHHHHHHhhCCCCCCCCccc-ccHHHHHhccccccccCCccCCHHH--------
Confidence 6778999999554 56899999999999999999999999753321 1112222222222222233334433
Q ss_pred HHHHHHHHHhcccCCCCCCCCChHH
Q 007935 549 QVLATFHIALNCTELDPEFRPRMRT 573 (584)
Q Consensus 549 ~~~~~~~l~~~Cl~~~P~~RPt~~e 573 (584)
.+++.+||+.||++||+++|
T Consensus 226 -----~~li~~~l~~~p~~R~~~~~ 245 (277)
T cd05577 226 -----KDLCEALLQKDPEKRLGCRG 245 (277)
T ss_pred -----HHHHHHHccCChhHccCCCc
Confidence 45667799999999994444
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.4e-25 Score=220.24 Aligned_cols=209 Identities=18% Similarity=0.259 Sum_probs=150.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||++....++ ..||+|.+..... ...+.+.+|+.++++++||||+++++++...+..++|+||
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~~-----~~v~iK~~~~~~~-~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~ 97 (293)
T cd06647 24 FEKIGQGASGTVYTAIDVATG-----QEVAIKQMNLQQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEY 97 (293)
T ss_pred eeEecCCCCeEEEEEEEcCCC-----CEEEEEEeccccc-hHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEec
Confidence 356999999999999876554 7899999865432 2347789999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc------------------------cc--ccccCCCCccccccCeEEecCCCcc-----------cccC
Q 007935 427 IRNGSLYAALHG------------------------FG--LNRLLPGTSKVTKNETIVTSGTGSR-----------ISAI 469 (584)
Q Consensus 427 ~~~GsL~~~L~~------------------------~g--~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~~g 469 (584)
+++|+|.+++.. .| |+++.+.|+.+..+...+..+++.. ...+
T Consensus 98 ~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~~~~~ 177 (293)
T cd06647 98 LAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVG 177 (293)
T ss_pred CCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceecccccccccccccC
Confidence 999999766542 23 4555666666655566666666521 1257
Q ss_pred CCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHHH
Q 007935 470 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQ 549 (584)
Q Consensus 470 t~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 549 (584)
+..|+|||++.. ..++.++|||||||++||+++|+.||....... ............. ..+. ..
T Consensus 178 ~~~y~~PE~~~~-~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~----~~~~~~~~~~~~~---~~~~--------~~ 241 (293)
T cd06647 178 TPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR----ALYLIATNGTPEL---QNPE--------KL 241 (293)
T ss_pred ChhhcCchhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCChhh----heeehhcCCCCCC---CCcc--------cc
Confidence 778999998554 578999999999999999999999997532211 1100000111110 0000 01
Q ss_pred HHHHHHHHhcccCCCCCCCCChHHHHHH
Q 007935 550 VLATFHIALNCTELDPEFRPRMRTVSES 577 (584)
Q Consensus 550 ~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 577 (584)
...+.+++.+||+.+|++||++.+++..
T Consensus 242 ~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 242 SAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1234567788999999999999999853
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.5e-25 Score=220.76 Aligned_cols=208 Identities=20% Similarity=0.270 Sum_probs=152.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcc--hhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT--WRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~--~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|++|.||+|.....+ +.||+|.+...... ...+.+.+|++++++++||||+++++.+.+.+..++||
T Consensus 6 ~~~ig~g~~g~vy~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 6 IKLLGKGDVGRVFLVRLKGTG-----KLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred eeeecCCccEEEEEEEEcCCC-----cEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 357999999999999988755 89999999765322 24467999999999999999999999999999999999
Q ss_pred ecccCCcHHHHHh---------------------------ccc--ccccCCCCccccccCeEEecCCCcc----------
Q 007935 425 DFIRNGSLYAALH---------------------------GFG--LNRLLPGTSKVTKNETIVTSGTGSR---------- 465 (584)
Q Consensus 425 Ey~~~GsL~~~L~---------------------------~~g--~~~~~~~~~~i~~~~~~~~~~~~~~---------- 465 (584)
||+++|+|.++++ +.| |+++.+.|+.+..++.++..+++..
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 160 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPV 160 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhccccccccc
Confidence 9999999977664 222 5667777777666665555554421
Q ss_pred ------------------------------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCC
Q 007935 466 ------------------------------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDG 515 (584)
Q Consensus 466 ------------------------------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~ 515 (584)
...||..|+|||++.. ..++.++|||||||++|||++|+.||......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~- 238 (316)
T cd05574 161 SKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISG-DGHGSAVDWWTLGILLYEMLYGTTPFKGSNRD- 238 (316)
T ss_pred ccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcC-CCCCchHHHHHHHHHHHHHhhCCCCCCCCchH-
Confidence 1246788999999554 67899999999999999999999999753321
Q ss_pred CcHHHHHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCC----hHHHHH
Q 007935 516 KGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPR----MRTVSE 576 (584)
Q Consensus 516 ~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt----~~ev~~ 576 (584)
................. . ....+.+++.+||+.||++||| +.|+++
T Consensus 239 ----~~~~~~~~~~~~~~~~~--~---------~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 239 ----ETFSNILKKEVTFPGSP--P---------VSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred ----HHHHHHhcCCccCCCcc--c---------cCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 11222222221111110 0 1124566788899999999999 666654
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.8e-24 Score=212.34 Aligned_cols=212 Identities=18% Similarity=0.303 Sum_probs=155.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|++|.||+|.....+ +.||||++.........+.|.+|++.+.+++|+||+++++++...+..++||||
T Consensus 6 ~~~i~~g~~~~v~~~~~~~~~-----~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 6 VKVLGQGSSGVVYKVRHKPTG-----KIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred eeeeeecCCeEEEEEEEcCCC-----cEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 367999999999999998755 899999998764434457899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHh-------------------------c-cc--ccccCCCCccccccCeEEecCCCcc-----------cc
Q 007935 427 IRNGSLYAALH-------------------------G-FG--LNRLLPGTSKVTKNETIVTSGTGSR-----------IS 467 (584)
Q Consensus 427 ~~~GsL~~~L~-------------------------~-~g--~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~ 467 (584)
+++++|.+++. + .| |+++.+.|+.+..++.+...+++.. ..
T Consensus 81 ~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~ 160 (264)
T cd06623 81 MDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTF 160 (264)
T ss_pred cCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCcccce
Confidence 99999976663 3 32 3445555555555565666555422 23
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHH
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAK 547 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 547 (584)
.++..|+|||.+.. ..++.++||||||+++|||+||+.||..... ....+..........+ ..+...
T Consensus 161 ~~~~~y~~pE~~~~-~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~--~~~~~~~~~~~~~~~~---~~~~~~------- 227 (264)
T cd06623 161 VGTVTYMSPERIQG-ESYSYAADIWSLGLTLLECALGKFPFLPPGQ--PSFFELMQAICDGPPP---SLPAEE------- 227 (264)
T ss_pred eecccccCHhhhCC-CCCCchhhHHHHHHHHHHHHhCCCCCccccc--cCHHHHHHHHhcCCCC---CCCccc-------
Confidence 46778999998554 5789999999999999999999999975432 1233333333322111 111110
Q ss_pred HHHHHHHHHHhcccCCCCCCCCChHHHHHH
Q 007935 548 RQVLATFHIALNCTELDPEFRPRMRTVSES 577 (584)
Q Consensus 548 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 577 (584)
....+.+++.+||+.+|++||++.|+++.
T Consensus 228 -~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 228 -FSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred -CCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 11245567777999999999999999863
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.9e-25 Score=214.38 Aligned_cols=207 Identities=20% Similarity=0.284 Sum_probs=149.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|.....+ ..||+|.+.... .....+.+.+|++++++++|+||+++++++.+.+..++|||
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e 79 (257)
T cd08225 5 IKKIGEGSFGKIYLAKAKSDS-----EHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVME 79 (257)
T ss_pred EEEecCCCcceEEEEEEcCCC-----ceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEe
Confidence 467999999999999998765 789999987642 12234678899999999999999999999999999999999
Q ss_pred cccCCcHHHHHhc---------------------------cc--ccccCCCCccccccCe-EEecCCCcc----------
Q 007935 426 FIRNGSLYAALHG---------------------------FG--LNRLLPGTSKVTKNET-IVTSGTGSR---------- 465 (584)
Q Consensus 426 y~~~GsL~~~L~~---------------------------~g--~~~~~~~~~~i~~~~~-~~~~~~~~~---------- 465 (584)
|+++++|.+++.. .+ |.++.+.|+.+..++. .+..+++..
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~ 159 (257)
T cd08225 80 YCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELA 159 (257)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCcccc
Confidence 9999999877643 12 3444444444443332 244444321
Q ss_pred -cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhh
Q 007935 466 -ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEI 544 (584)
Q Consensus 466 -~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~ 544 (584)
...|+..|+|||+... ..++.++|||||||++|||++|+.||... ...++......... . ...+..
T Consensus 160 ~~~~~~~~~~ape~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~-----~~~~~~~~~~~~~~--~-~~~~~~---- 226 (257)
T cd08225 160 YTCVGTPYYLSPEICQN-RPYNNKTDIWSLGCVLYELCTLKHPFEGN-----NLHQLVLKICQGYF--A-PISPNF---- 226 (257)
T ss_pred cccCCCccccCHHHHcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCc-----cHHHHHHHHhcccC--C-CCCCCC----
Confidence 2357888999998554 57899999999999999999999998642 23333333322211 1 111111
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
...+.+++.+||+.+|++|||+.|+++
T Consensus 227 -----~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 227 -----SRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred -----CHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 124556788899999999999999975
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-24 Score=212.41 Aligned_cols=204 Identities=23% Similarity=0.352 Sum_probs=150.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||++...+ +.||+|.++.... .+.|.+|+.++++++||||+++++++..+ ..++||||
T Consensus 11 ~~~lg~g~~g~v~~~~~~~-------~~~~iK~~~~~~~---~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~ 79 (254)
T cd05083 11 GEIIGEGEFGAVLQGEYTG-------QKVAVKNIKCDVT---AQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMEL 79 (254)
T ss_pred eeeeccCCCCceEecccCC-------CceEEEeecCcch---HHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEEC
Confidence 4679999999999987533 6899999875322 26799999999999999999999998654 57999999
Q ss_pred ccCCcHHHHHhc---------------------------cc--ccccCCCCccccccCeEEecCCCccc--------ccC
Q 007935 427 IRNGSLYAALHG---------------------------FG--LNRLLPGTSKVTKNETIVTSGTGSRI--------SAI 469 (584)
Q Consensus 427 ~~~GsL~~~L~~---------------------------~g--~~~~~~~~~~i~~~~~~~~~~~~~~~--------~~g 469 (584)
+++|+|.+++.. .| |+++.+.|+.+..++.++..++|... ...
T Consensus 80 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~ 159 (254)
T cd05083 80 MSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKL 159 (254)
T ss_pred CCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceeccccCCCCCC
Confidence 999999766642 22 56677777777666777777766332 123
Q ss_pred CCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCC-CCccccChhhhhhhhHH
Q 007935 470 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERR-PLSEVIDPALVKEIHAK 547 (584)
Q Consensus 470 t~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~ 547 (584)
+..|+|||++.. ..++.++|||||||++|||++ |+.||.... ............. ...+.+
T Consensus 160 ~~~y~~pe~~~~-~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~----------- 222 (254)
T cd05083 160 PVKWTAPEALKH-KKFSSKSDVWSYGVLLWEVFSYGRAPYPKMS-----LKEVKECVEKGYRMEPPEGC----------- 222 (254)
T ss_pred CceecCHHHhcc-CCcCchhhHHHHHHHHHHHHhCCCCCCccCC-----HHHHHHHHhCCCCCCCCCcC-----------
Confidence 456999998544 678999999999999999998 999987432 2222222211111 111111
Q ss_pred HHHHHHHHHHhcccCCCCCCCCChHHHHHHHHh
Q 007935 548 RQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580 (584)
Q Consensus 548 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 580 (584)
...+.+++.+||+.+|++||+++++++.|++
T Consensus 223 --~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 223 --PADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred --CHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 1244568888999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=99.92 E-value=2e-24 Score=211.15 Aligned_cols=212 Identities=27% Similarity=0.395 Sum_probs=157.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+++....+. .....||+|.++........+.+.+|++++.+++|+||+++++++.+.+..+++|||
T Consensus 4 ~~~lg~g~~g~v~~~~~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~ 82 (258)
T smart00219 4 GKKLGEGAFGEVYKGTLKGLSG-EKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEY 82 (258)
T ss_pred cceeccCCCcceEEEEecCCCC-CCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEec
Confidence 3579999999999999876431 223789999997764443558899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc---------------------------c--cccccCCCCccccccCeEEecCCCccc-----------
Q 007935 427 IRNGSLYAALHG---------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI----------- 466 (584)
Q Consensus 427 ~~~GsL~~~L~~---------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~----------- 466 (584)
+++++|.++++. . -|+++.+.|+.+..++.++..+++...
T Consensus 83 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 162 (258)
T smart00219 83 MEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKKK 162 (258)
T ss_pred cCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceecccccccccc
Confidence 999999777643 1 245666677666666666666665331
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCC-CccccChhhhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP-LSEVIDPALVKE 543 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~d~~~~~~ 543 (584)
..++..|+|||.. .+..++.++||||+|++++||++ |+.||... ............... .....
T Consensus 163 ~~~~~~~y~~Pe~~-~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~-----~~~~~~~~~~~~~~~~~~~~~------- 229 (258)
T smart00219 163 GGKLPIRWMAPESL-KDGKFTSKSDVWSFGVLLWEIFTLGESPYPGM-----SNEEVLEYLKKGYRLPKPENC------- 229 (258)
T ss_pred cCCCcccccChHHh-ccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC-----CHHHHHHHHhcCCCCCCCCcC-------
Confidence 2256789999985 44678999999999999999999 78888642 222333332222211 11111
Q ss_pred hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHH
Q 007935 544 IHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 578 (584)
Q Consensus 544 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L 578 (584)
...+.+++.+|+..+|++|||+.|+++.|
T Consensus 230 ------~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 230 ------PPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred ------CHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 22456688889999999999999998764
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.8e-25 Score=217.35 Aligned_cols=220 Identities=17% Similarity=0.222 Sum_probs=149.1
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc-chhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~-~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
+.||+|++|.||+|....++ ..||+|++..... ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 5 ~~l~~g~~~~vy~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~ 79 (283)
T cd07835 5 EKIGEGTYGVVYKARDKLTG-----EIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEF 79 (283)
T ss_pred eEecCCCCeEEEEEEEcCCC-----CEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEec
Confidence 56999999999999987655 7999999876432 22236788999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc---------------------------cc--ccccCCCCccccccCeEEecCCCccc-----------
Q 007935 427 IRNGSLYAALHG---------------------------FG--LNRLLPGTSKVTKNETIVTSGTGSRI----------- 466 (584)
Q Consensus 427 ~~~GsL~~~L~~---------------------------~g--~~~~~~~~~~i~~~~~~~~~~~~~~~----------- 466 (584)
++ ++|.+++.. .+ |.++.+.|+.+..+..++..+++...
T Consensus 80 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~ 158 (283)
T cd07835 80 LD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTH 158 (283)
T ss_pred cC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCc
Confidence 95 688766543 22 34555555555555666665554321
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC--------------CC
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR--------------PL 532 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~--------------~~ 532 (584)
..++..|+|||++..+..++.++|||||||++|||+||+.||...... ..+....+....... ..
T Consensus 159 ~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (283)
T cd07835 159 EVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEI-DQLFRIFRTLGTPDEDVWPGVTSLPDYKPTF 237 (283)
T ss_pred cccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCChHHhhhhhhchhhhhhc
Confidence 235778999998655456789999999999999999999999753211 111111111000000 00
Q ss_pred ccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 533 SEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 533 ~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.....+..... .......+.+++.+|++.||++|||+.|+++
T Consensus 238 ~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 238 PKWARQDLSKV--VPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred ccccccchhhh--cCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 00000000000 0011135678999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=99.92 E-value=6e-25 Score=218.74 Aligned_cols=221 Identities=18% Similarity=0.211 Sum_probs=147.9
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc-chhhHhHHHHHHHHHhc---CCCceeeeeEEEEeC-----C
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARV---QHPNIVRLKAFYYAN-----D 418 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~-~~~~~~f~~Ei~~l~~l---~HpnIV~l~g~~~~~-----~ 418 (584)
+.||+|+||.||+|+...++ +.||+|.++.... ......+.+|+++++++ +||||+++++++... .
T Consensus 6 ~~lg~g~~g~v~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 6 AEIGVGAYGTVYKARDPHSG-----HFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred eEEeecCCeEEEEEEECCCC-----cEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 56999999999999988765 8999999876422 12224567788877766 799999999998652 3
Q ss_pred ceeEeeecccCCcHHHHH---------------------------hccc--ccccCCCCccccccCeEEecCCCccc---
Q 007935 419 EKLLISDFIRNGSLYAAL---------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSRI--- 466 (584)
Q Consensus 419 ~~~lV~Ey~~~GsL~~~L---------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~--- 466 (584)
..++||||+++ +|.+++ |+.| |+++.+.|+.+..++.++..++|...
T Consensus 81 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~ 159 (288)
T cd07863 81 KVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIYS 159 (288)
T ss_pred eEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCcccccc
Confidence 57999999985 775554 3333 56777777777777777777765322
Q ss_pred -------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhh-cCCCCc-----
Q 007935 467 -------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR-ERRPLS----- 533 (584)
Q Consensus 467 -------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~-~~~~~~----- 533 (584)
..||..|+|||++.. ..++.++||||+||++|||++|++||...... ..+......... ....++
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 237 (288)
T cd07863 160 CQMALTPVVVTLWYRAPEVLLQ-STYATPVDMWSVGCIFAEMFRRKPLFCGNSEA-DQLGKIFDLIGLPPEDDWPRDVTL 237 (288)
T ss_pred CcccCCCccccccccCchHhhC-CCCCCcchhhhHHHHHHHHHhCCcCcCCCCHH-HHHHHHHHHhCCCChhhCcccccc
Confidence 356888999999654 67899999999999999999999998653221 111111111000 000000
Q ss_pred --cccChhhhhhhhH--HHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 534 --EVIDPALVKEIHA--KRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 534 --~~~d~~~~~~~~~--~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
..+.+........ ......+.+++.+|++.||++|||+.|++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 238 PRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred cccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0000000000000 011235678899999999999999999874
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.5e-25 Score=232.32 Aligned_cols=219 Identities=15% Similarity=0.218 Sum_probs=147.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCC------ceeeeeEEEEeC-Cc
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHP------NIVRLKAFYYAN-DE 419 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~Hp------nIV~l~g~~~~~-~~ 419 (584)
.+.||+|+||+||+|.....+ +.||||+++.... ..+++..|++++.+++|. +++++++++..+ +.
T Consensus 134 ~~~lG~G~fg~V~~a~~~~~~-----~~vAvK~i~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~ 206 (467)
T PTZ00284 134 LSLLGEGTFGKVVEAWDRKRK-----EYCAVKIVRNVPK--YTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGH 206 (467)
T ss_pred EEEEEeccCEEEEEEEEcCCC-----eEEEEEEEecchh--hHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCce
Confidence 467999999999999987765 7999999975321 225567788888877654 589999998765 46
Q ss_pred eeEeeecccCCcHHH-------------------------HHhc---ccccccCCCCccccccC----------------
Q 007935 420 KLLISDFIRNGSLYA-------------------------ALHG---FGLNRLLPGTSKVTKNE---------------- 455 (584)
Q Consensus 420 ~~lV~Ey~~~GsL~~-------------------------~L~~---~g~~~~~~~~~~i~~~~---------------- 455 (584)
.++|||++ +++|.+ |||. ..|+|++++|+.+..++
T Consensus 207 ~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~ 285 (467)
T PTZ00284 207 MCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPC 285 (467)
T ss_pred EEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCc
Confidence 88999988 556643 4553 24678888887765443
Q ss_pred eEEecCCCcc--------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhh
Q 007935 456 TIVTSGTGSR--------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 527 (584)
Q Consensus 456 ~~~~~~~~~~--------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~ 527 (584)
.++..+||.. ...||..|||||++. +..++.++|||||||++|||+||+.||.+.... .....+.....
T Consensus 286 ~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~-~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~--~~~~~i~~~~g 362 (467)
T PTZ00284 286 RVRICDLGGCCDERHSRTAIVSTRHYRSPEVVL-GLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNL--EHLHLMEKTLG 362 (467)
T ss_pred eEEECCCCccccCccccccccCCccccCcHHhh-cCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHcC
Confidence 3566777632 247899999999965 468999999999999999999999999753221 11111111110
Q ss_pred c--------------------CCCCccccChhhh-hhh-----hHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 528 E--------------------RRPLSEVIDPALV-KEI-----HAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 528 ~--------------------~~~~~~~~d~~~~-~~~-----~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
. ...+....++... ... ........+.+|+.+||+.||++|||+.|+++
T Consensus 363 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~ 437 (467)
T PTZ00284 363 RLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTT 437 (467)
T ss_pred CCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhc
Confidence 0 0000001111100 000 00011235678999999999999999999985
|
|
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.9e-25 Score=216.43 Aligned_cols=219 Identities=17% Similarity=0.220 Sum_probs=148.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcC-CCceeeeeEEEEeC--CceeEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-HPNIVRLKAFYYAN--DEKLLI 423 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~-HpnIV~l~g~~~~~--~~~~lV 423 (584)
.+.||+|+||.||+|.....+ +.||+|+++............+|+.++.++. ||||+++++++.++ +..++|
T Consensus 4 ~~~lg~g~~~~v~~~~~~~~~-----~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv 78 (282)
T cd07831 4 LGKIGEGTFSEVLKAQSRKTG-----KYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALV 78 (282)
T ss_pred EeeccccccceEEEEEEcCCC-----cEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEE
Confidence 356999999999999987655 7999999876532222245568999999995 99999999999987 889999
Q ss_pred eecccCCcHHHHHh--------------------------ccc--ccccCCCCccccccCeEEecCCCcc----------
Q 007935 424 SDFIRNGSLYAALH--------------------------GFG--LNRLLPGTSKVTKNETIVTSGTGSR---------- 465 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~--------------------------~~g--~~~~~~~~~~i~~~~~~~~~~~~~~---------- 465 (584)
|||++ |+|.+++. +.| |+++.+.|+.+.. ...+..+++..
T Consensus 79 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~~ 156 (282)
T cd07831 79 FELMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPYT 156 (282)
T ss_pred EecCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccCCCcC
Confidence 99997 57765553 223 4555555655555 55555555422
Q ss_pred cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhc-----------CC----
Q 007935 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE-----------RR---- 530 (584)
Q Consensus 466 ~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~-----------~~---- 530 (584)
...++..|+|||++..+..++.++|||||||++|||++|..||.+.+.. ............ ..
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (282)
T cd07831 157 EYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNEL--DQIAKIHDVLGTPDAEVLKKFRKSRHMNY 234 (282)
T ss_pred CCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHH--HHHHHHHHHcCCCCHHHHHhhcccccccc
Confidence 1246788999997655566789999999999999999999999753221 111111111100 00
Q ss_pred CCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 531 PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 531 ~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
..+......+... .......+.+++.+||+++|++|||+.++++
T Consensus 235 ~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 235 NFPSKKGTGLRKL--LPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred cCcccccccHHHH--cccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 0001111111100 0122467888999999999999999999975
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.8e-25 Score=218.39 Aligned_cols=212 Identities=18% Similarity=0.263 Sum_probs=151.7
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcC-CCceeeeeEEEEeCCceeEeeec
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-HPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~-HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
..||+|+||.||++.....+ +.||+|.+...........+.+|+.++.++. |||||++++++..++..+++|||
T Consensus 10 ~~lg~G~~g~vy~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 10 GEIGRGAFGTVNKMLHKPSG-----TIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HHhCCCCceEEEEEEECCCC-----CEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 57999999999999987765 8999999976543344578999999999996 99999999999999999999999
Q ss_pred ccCC--cH---------------------------HHHHhc---ccccccCCCCccccccCeEEecCCCcc---------
Q 007935 427 IRNG--SL---------------------------YAALHG---FGLNRLLPGTSKVTKNETIVTSGTGSR--------- 465 (584)
Q Consensus 427 ~~~G--sL---------------------------~~~L~~---~g~~~~~~~~~~i~~~~~~~~~~~~~~--------- 465 (584)
+... ++ .+|||. .-|+++.+.|+.+..++.++..++|..
T Consensus 85 ~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 164 (288)
T cd06616 85 MDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAK 164 (288)
T ss_pred ccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCCcc
Confidence 8641 22 134442 235667777776666666666666532
Q ss_pred -cccCCCcccCccccccC--CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhh
Q 007935 466 -ISAISNVYLAPEARIYG--SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVK 542 (584)
Q Consensus 466 -~~~gt~~y~aPE~~~~~--~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~ 542 (584)
...|+..|+|||++... ..++.++|||||||++|||++|+.||.... ..............+ . ......
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~----~~~~~~~~~~~~~~~--~-~~~~~~- 236 (288)
T cd06616 165 TRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN----SVFDQLTQVVKGDPP--I-LSNSEE- 236 (288)
T ss_pred ccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc----hHHHHHhhhcCCCCC--c-CCCcCC-
Confidence 23578889999986553 368999999999999999999999986422 111222222211111 0 111000
Q ss_pred hhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 543 EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 543 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.....++.+++.+||+.+|++|||+.||++
T Consensus 237 ----~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~ 266 (288)
T cd06616 237 ----REFSPSFVNFINLCLIKDESKRPKYKELLE 266 (288)
T ss_pred ----CccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 012235667888999999999999999985
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-24 Score=219.98 Aligned_cols=218 Identities=23% Similarity=0.275 Sum_probs=149.2
Q ss_pred eceee--cCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 349 VVGKS--KNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 349 ~iG~G--~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.||+| +||+||+++....+ +.||||.+.... .....+.+.+|+.+++.++|||||+++++|..++..++|||
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e 79 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTG-----TLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISP 79 (328)
T ss_pred HhCCcccCceeEEEEEEcCCC-----cEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEe
Confidence 46666 89999999987655 899999987643 33345788999999999999999999999999999999999
Q ss_pred cccCCcHHHHHh---------------------------ccc--ccccCCCCccccccCeEEecCCCc------------
Q 007935 426 FIRNGSLYAALH---------------------------GFG--LNRLLPGTSKVTKNETIVTSGTGS------------ 464 (584)
Q Consensus 426 y~~~GsL~~~L~---------------------------~~g--~~~~~~~~~~i~~~~~~~~~~~~~------------ 464 (584)
|+.+|+|.+++. +.| |+++++.|+.+..+......+++.
T Consensus 80 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (328)
T cd08226 80 FMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAK 159 (328)
T ss_pred cccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccc
Confidence 999999866654 323 577777777665554444433310
Q ss_pred ------ccccCCCcccCccccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC-CCc---
Q 007935 465 ------RISAISNVYLAPEARIYG-SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR-PLS--- 533 (584)
Q Consensus 465 ------~~~~gt~~y~aPE~~~~~-~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~--- 533 (584)
....++..|||||++..+ ..++.++|||||||++|||++|+.||...... ............ +..
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~ 235 (328)
T cd08226 160 VVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRT----QMLLQKLKGPPYSPLDITT 235 (328)
T ss_pred ccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChH----HHHHHHhcCCCCCCccccc
Confidence 011245569999996543 34789999999999999999999999753221 111111100000 000
Q ss_pred ------------------------------cccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 534 ------------------------------EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 534 ------------------------------~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
...+..+.. .........+.+++.+||+.||++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~ 307 (328)
T cd08226 236 FPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRT-PSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS 307 (328)
T ss_pred cchhhhhhccchhhhhcccccchhccccccccccccccc-hhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 000000000 011223456789999999999999999999974
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.7e-25 Score=211.17 Aligned_cols=222 Identities=19% Similarity=0.278 Sum_probs=161.0
Q ss_pred eceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc-chhhHhHHHHHHHHHhcCCCc-eeeeeEEEEeCC------ce
Q 007935 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPN-IVRLKAFYYAND------EK 420 (584)
Q Consensus 349 ~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~-~~~~~~f~~Ei~~l~~l~Hpn-IV~l~g~~~~~~------~~ 420 (584)
.||+|+||+||+|+....+ +.||+|+++.... +..-..-.||+.++++++|+| ||+|++++.+.+ ..
T Consensus 18 klGeGtyg~Vykar~~~~g-----~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l 92 (323)
T KOG0594|consen 18 KLGEGTYGVVYKARSKRTG-----KFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKL 92 (323)
T ss_pred HhCCCCceEEEEEEEecCC-----CEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceE
Confidence 4999999999999998887 8999999987633 223356789999999999999 999999999877 78
Q ss_pred eEeeecccCCcHH-----------------------------HHHhccc--ccccCCCCccccccCeEEecCCCccc---
Q 007935 421 LLISDFIRNGSLY-----------------------------AALHGFG--LNRLLPGTSKVTKNETIVTSGTGSRI--- 466 (584)
Q Consensus 421 ~lV~Ey~~~GsL~-----------------------------~~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~--- 466 (584)
++|+||++. +|. +|+|..+ |+|+++.|..|..++.++..|||...
T Consensus 93 ~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ 171 (323)
T KOG0594|consen 93 YLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARAFS 171 (323)
T ss_pred EEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHHhc
Confidence 899999864 443 4445444 68999999999999999999987533
Q ss_pred --------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHH-hhcCCCCcccc-
Q 007935 467 --------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKA-FRERRPLSEVI- 536 (584)
Q Consensus 467 --------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~- 536 (584)
..+|.+|.|||++.....|++..||||+||++.||++++.-|.+... ...+..+.+.. .+....++.+.
T Consensus 172 ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se-~~ql~~If~~lGtP~e~~Wp~v~~ 250 (323)
T KOG0594|consen 172 IPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSE-IDQLFRIFRLLGTPNEKDWPGVSS 250 (323)
T ss_pred CCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcH-HHHHHHHHHHcCCCCccCCCCccc
Confidence 35788999999987766899999999999999999999988876332 11111111111 11111111111
Q ss_pred ----Chhhhh-----hhhH--HHHHHHHHHHHhcccCCCCCCCCChHHHHHH
Q 007935 537 ----DPALVK-----EIHA--KRQVLATFHIALNCTELDPEFRPRMRTVSES 577 (584)
Q Consensus 537 ----d~~~~~-----~~~~--~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 577 (584)
++.... .... ..-.....+++.+|++.+|.+|.|+..++..
T Consensus 251 ~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 251 LPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred cccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 100000 0000 0001356789999999999999999999874
|
|
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-24 Score=215.52 Aligned_cols=220 Identities=17% Similarity=0.241 Sum_probs=151.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc-chhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~-~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|+...++ ..||||++..... ....+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~-----~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e 79 (286)
T cd07832 5 LGRIGEGAHGIVFKAKDRETG-----ETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVME 79 (286)
T ss_pred EeecccCCCcEEEEEEECCCC-----ceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEec
Confidence 457999999999999987655 7999999976532 3334789999999999999999999999999999999999
Q ss_pred cccCCcHHHHHhc--------------------------cc--ccccCCCCccccccCeEEecCCCc------------c
Q 007935 426 FIRNGSLYAALHG--------------------------FG--LNRLLPGTSKVTKNETIVTSGTGS------------R 465 (584)
Q Consensus 426 y~~~GsL~~~L~~--------------------------~g--~~~~~~~~~~i~~~~~~~~~~~~~------------~ 465 (584)
|+ +++|.++++. .| |.++.+.|+.+..++.++..+++. .
T Consensus 80 ~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~ 158 (286)
T cd07832 80 YM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYS 158 (286)
T ss_pred cc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCccc
Confidence 99 9999776642 22 455555565555555555555432 1
Q ss_pred cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC-----------Ccc
Q 007935 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP-----------LSE 534 (584)
Q Consensus 466 ~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~-----------~~~ 534 (584)
...|+..|+|||++.....++.++||||+||++|||+||++||..... ...+... ......... ...
T Consensus 159 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 236 (286)
T cd07832 159 HQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGEND-IEQLAIV-FRTLGTPNEETWPGLTSLPDYNK 236 (286)
T ss_pred cccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCH-HHHHHHH-HHHcCCCChHHHhhccCcchhhc
Confidence 235778899999865545678999999999999999999877764221 1111111 111100000 000
Q ss_pred ccCh-----hhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 535 VIDP-----ALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 535 ~~d~-----~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
...+ .+.... .+....+.+++.+|++.+|++|||++++++
T Consensus 237 ~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 237 ITFPESKPIPLEEIF--PDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred ccCCCCCcchHHHhC--CCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 0000 000000 012357788999999999999999999975
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1e-24 Score=217.35 Aligned_cols=207 Identities=19% Similarity=0.279 Sum_probs=150.7
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeecc
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 427 (584)
..||+|+||.||++.....+ ..||||++.... ....+.+.+|+.++++++|+||+++++++...+..++||||+
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~-----~~v~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 99 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSG-----KLVAVKKMDLRK-QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 99 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCC-----eEEEEEEecccc-hhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecC
Confidence 46999999999999987655 899999986533 233467999999999999999999999999999999999999
Q ss_pred cCCcHHHHH------------------------hccc--ccccCCCCccccccCeEEecCCCcc-----------cccCC
Q 007935 428 RNGSLYAAL------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSR-----------ISAIS 470 (584)
Q Consensus 428 ~~GsL~~~L------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~~gt 470 (584)
++++|.+++ |+.| |.++.+.|+.+..++.....+++.. ...|+
T Consensus 100 ~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 179 (292)
T cd06657 100 EGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGT 179 (292)
T ss_pred CCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccccccccccccC
Confidence 999996654 3333 4666666666666666666665522 13577
Q ss_pred CcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHHHH
Q 007935 471 NVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQV 550 (584)
Q Consensus 471 ~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 550 (584)
..|+|||+... ..++.++|||||||++|||++|+.||..... ....................+++
T Consensus 180 ~~y~~pE~~~~-~~~~~~~Dv~slGvil~el~tg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~------------ 244 (292)
T cd06657 180 PYWMAPELISR-LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKMIRDNLPPKLKNLHKVSP------------ 244 (292)
T ss_pred ccccCHHHhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhhCCcccCCcccCCH------------
Confidence 88999998544 5789999999999999999999999874211 11111111111111101111222
Q ss_pred HHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 551 LATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 551 ~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||+.+|.+||++.++++
T Consensus 245 -~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 245 -SLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred -HHHHHHHHHHhCCcccCcCHHHHhc
Confidence 2345677799999999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-24 Score=216.23 Aligned_cols=221 Identities=17% Similarity=0.244 Sum_probs=151.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|++|.||+|+...++ ..||||+++........+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~-----~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 79 (284)
T cd07836 5 LEKLGEGTYATVYKGRNRTTG-----EIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEY 79 (284)
T ss_pred eeeeccCCceEEEEEEECCCC-----eEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEec
Confidence 357999999999999987665 899999998754443446788999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc----------------------------cc--ccccCCCCccccccCeEEecCCCcc-----------
Q 007935 427 IRNGSLYAALHG----------------------------FG--LNRLLPGTSKVTKNETIVTSGTGSR----------- 465 (584)
Q Consensus 427 ~~~GsL~~~L~~----------------------------~g--~~~~~~~~~~i~~~~~~~~~~~~~~----------- 465 (584)
+++ +|.+++.. .| |.++.+.|+.+..++.++..+++..
T Consensus 80 ~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~ 158 (284)
T cd07836 80 MDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFS 158 (284)
T ss_pred CCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccccc
Confidence 985 77665532 22 3444555555555555555555422
Q ss_pred cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHh----------hcCC----C
Q 007935 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF----------RERR----P 531 (584)
Q Consensus 466 ~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~----------~~~~----~ 531 (584)
...++..|++||++..+..++.++|||||||++|||++|+.||.+....+ .......... .... .
T Consensus 159 ~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd07836 159 NEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNED-QLLKIFRIMGTPTESTWPGISQLPEYKPT 237 (284)
T ss_pred cccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCCChhhHHHHhcCchhccc
Confidence 13467789999986554567899999999999999999999997543211 1111111100 0000 0
Q ss_pred CccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 532 ~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+...+... .... ......+.+++.+|++.||.+||++.|+++
T Consensus 238 ~~~~~~~~~-~~~~-~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 238 FPRYPPQDL-QQLF-PHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred ccCCChHHH-HHHh-hhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 000000010 0000 012345678999999999999999999874
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=99.92 E-value=2e-24 Score=215.33 Aligned_cols=207 Identities=22% Similarity=0.363 Sum_probs=148.0
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeC-----Ccee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYAN-----DEKL 421 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~-----~~~~ 421 (584)
+.||+|+||.||++....++ +.+|+|.+...... .+.+.+|+.++.++ +||||+++++++.+. +..+
T Consensus 28 ~~l~~g~~~~vy~~~~~~~~-----~~~aik~~~~~~~~--~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~ 100 (291)
T cd06639 28 ETIGKGTYGKVYKVTNKKDG-----SLAAVKILDPISDV--DEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLW 100 (291)
T ss_pred EEeecCCCeEEEEEEECCCC-----CEEEEEEecccccH--HHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeE
Confidence 57999999999999987665 79999998754222 36788999999999 899999999999764 3589
Q ss_pred EeeecccCCcHHHHHhc-----------------------------cc--ccccCCCCccccccCeEEecCCCcc-----
Q 007935 422 LISDFIRNGSLYAALHG-----------------------------FG--LNRLLPGTSKVTKNETIVTSGTGSR----- 465 (584)
Q Consensus 422 lV~Ey~~~GsL~~~L~~-----------------------------~g--~~~~~~~~~~i~~~~~~~~~~~~~~----- 465 (584)
+||||+++|+|.++++. .| |+++.+.|..+..+..++..+++..
T Consensus 101 lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~ 180 (291)
T cd06639 101 LVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTS 180 (291)
T ss_pred EEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccchhccc
Confidence 99999999999776642 22 4556666666666666666665432
Q ss_pred ------cccCCCcccCccccccCC----CCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccc
Q 007935 466 ------ISAISNVYLAPEARIYGS----KFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEV 535 (584)
Q Consensus 466 ------~~~gt~~y~aPE~~~~~~----~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 535 (584)
...|+..|+|||++..+. .++.++|||||||++|||++|+.||..... ..... ....... ...
T Consensus 181 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~----~~~~~-~~~~~~~--~~~ 253 (291)
T cd06639 181 TRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHP----VKTLF-KIPRNPP--PTL 253 (291)
T ss_pred ccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcH----HHHHH-HHhcCCC--CCC
Confidence 235678899999854322 368999999999999999999999874321 11111 1111111 111
Q ss_pred cChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 536 IDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 536 ~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.++. .....+.+++.+||+.+|++||++.|+++
T Consensus 254 ~~~~--------~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 254 LHPE--------KWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred Cccc--------ccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 1111 11124667888999999999999999975
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.7e-24 Score=214.22 Aligned_cols=208 Identities=19% Similarity=0.217 Sum_probs=147.1
Q ss_pred eceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc--chhhHhHHHHHH---HHHhcCCCceeeeeEEEEeCCceeEe
Q 007935 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA--TWRFKDFESEVE---AIARVQHPNIVRLKAFYYANDEKLLI 423 (584)
Q Consensus 349 ~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~--~~~~~~f~~Ei~---~l~~l~HpnIV~l~g~~~~~~~~~lV 423 (584)
+||+|+||.||++.....+ +.||+|.+..... ......+..|.. .++..+||||+++++++.+.+..++|
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v 75 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTG-----KMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFI 75 (278)
T ss_pred CcccCCCeEEEEEEEecCC-----CEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEE
Confidence 4899999999999987655 7999999876421 111233445544 34445899999999999999999999
Q ss_pred eecccCCcHHHHHh-------------------------ccc--ccccCCCCccccccCeEEecCCCcc---------cc
Q 007935 424 SDFIRNGSLYAALH-------------------------GFG--LNRLLPGTSKVTKNETIVTSGTGSR---------IS 467 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~-------------------------~~g--~~~~~~~~~~i~~~~~~~~~~~~~~---------~~ 467 (584)
|||+++|+|.+++. +.+ |+++.+.|+.+..+..++..+++.. ..
T Consensus 76 ~e~~~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~ 155 (278)
T cd05606 76 LDLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS 155 (278)
T ss_pred EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcCc
Confidence 99999999966553 333 4566666666666666666676532 23
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHH
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAK 547 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 547 (584)
.|+..|+|||++..+..++.++|||||||++|||++|+.||...... ...............++..+++.
T Consensus 156 ~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~s~~-------- 225 (278)
T cd05606 156 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK--DKHEIDRMTLTMAVELPDSFSPE-------- 225 (278)
T ss_pred CCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCcc--chHHHHHHhhccCCCCCCcCCHH--------
Confidence 58889999999665556899999999999999999999999754221 11121122221222223333333
Q ss_pred HHHHHHHHHHhcccCCCCCCCC-----ChHHHHH
Q 007935 548 RQVLATFHIALNCTELDPEFRP-----RMRTVSE 576 (584)
Q Consensus 548 ~~~~~~~~l~~~Cl~~~P~~RP-----t~~ev~~ 576 (584)
+.+++.+|+..+|.+|| ++.++++
T Consensus 226 -----~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 226 -----LRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred -----HHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 44566779999999999 9999875
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.1e-25 Score=225.29 Aligned_cols=149 Identities=18% Similarity=0.211 Sum_probs=120.7
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
..+.||+|+||.||+|+....+ ..||+|.... .....|+.++++++|||||++++++.+.+..++|||
T Consensus 70 ~~~~lg~G~~g~Vy~~~~~~~~-----~~valK~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 137 (357)
T PHA03209 70 VIKTLTPGSEGRVFVATKPGQP-----DPVVLKIGQK-------GTTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLP 137 (357)
T ss_pred EEEEecCCCCeEEEEEEECCCC-----ceEEEEeCCc-------cccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEE
Confidence 3468999999999999987765 7899997543 234579999999999999999999999999999999
Q ss_pred cccCCcHHHHH--------------------------hccc--ccccCCCCccccccCeEEecCCCccc----------c
Q 007935 426 FIRNGSLYAAL--------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSRI----------S 467 (584)
Q Consensus 426 y~~~GsL~~~L--------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~----------~ 467 (584)
|+. |+|.+++ |..| |+++++.|+.+..+..++..++|... .
T Consensus 138 ~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~ 216 (357)
T PHA03209 138 HYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGL 216 (357)
T ss_pred ccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccCcccccc
Confidence 995 5776555 3333 67788888777777777777776432 3
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCC
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPD 508 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~ 508 (584)
.||..|+|||++.. ..++.++|||||||++|||+++..|+
T Consensus 217 ~gt~~y~aPE~~~~-~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 217 AGTVETNAPEVLAR-DKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred cccccccCCeecCC-CCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 58899999999654 67999999999999999999966554
|
|
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.8e-24 Score=212.18 Aligned_cols=205 Identities=18% Similarity=0.256 Sum_probs=147.7
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCC-CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEe--CCceeEee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARVQHPNIVRLKAFYYA--NDEKLLIS 424 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~--~~~~~lV~ 424 (584)
+.||.|+||.||++....++ ..||+|.+... ......+++.+|++++++++||||+++++++.. +...+++|
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~-----~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 6 ETIGKGSFGTVRKVRRKSDG-----KILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred eeeccCCCeEEEEeeecCCC-----CEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 56999999999999987765 78999998754 233344678999999999999999999998865 34578999
Q ss_pred ecccCCcHHHHHhc----------------------------------cc--ccccCCCCccccccCeEEecCCCc----
Q 007935 425 DFIRNGSLYAALHG----------------------------------FG--LNRLLPGTSKVTKNETIVTSGTGS---- 464 (584)
Q Consensus 425 Ey~~~GsL~~~L~~----------------------------------~g--~~~~~~~~~~i~~~~~~~~~~~~~---- 464 (584)
||+++|+|.+++.. .+ |.++.+.|+.+..++.++..+++.
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 99999999766532 11 233444454555555555555542
Q ss_pred -------ccccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC-CCcccc
Q 007935 465 -------RISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR-PLSEVI 536 (584)
Q Consensus 465 -------~~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~ 536 (584)
....++..|+|||++.. ..++.++||||||+++|||++|+.||.... ...+......... .++...
T Consensus 161 ~~~~~~~~~~~~~~~~~~pE~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~ 234 (265)
T cd08217 161 GHDSSFAKTYVGTPYYMSPEQLNH-MSYDEKSDIWSLGCLIYELCALSPPFTARN-----QLQLASKIKEGKFRRIPYRY 234 (265)
T ss_pred cCCcccccccccCCCccChhhhcC-CCCCchhHHHHHHHHHHHHHHCCCcccCcC-----HHHHHHHHhcCCCCCCcccc
Confidence 12357888999999554 578999999999999999999999997532 2222222222111 111111
Q ss_pred ChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 537 DPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 537 d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+ ..+.+++.+|++.+|++||++.+|++
T Consensus 235 ~-------------~~~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 235 S-------------SELNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred C-------------HHHHHHHHHHccCCcccCCCHHHHhh
Confidence 1 24556888899999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.7e-26 Score=208.17 Aligned_cols=212 Identities=17% Similarity=0.253 Sum_probs=161.7
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEeeec
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
..||.|+||+|+|-.++..+ +..|||+++......+.++++.|.++..+- +.||||+++|.+..++..|+.||+
T Consensus 70 g~iG~G~fG~V~KM~hk~sg-----~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMEL 144 (361)
T KOG1006|consen 70 GEIGNGAFGTVNKMLHKPSG-----KLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMEL 144 (361)
T ss_pred HHhcCCcchhhhhhhcCccC-----cEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHH
Confidence 35999999999999998876 899999999876656668999999875555 789999999999999999999999
Q ss_pred ccCCcHH---HHHh------------------------------cccccccCCCCccccccCeEEecCCCcc--------
Q 007935 427 IRNGSLY---AALH------------------------------GFGLNRLLPGTSKVTKNETIVTSGTGSR-------- 465 (584)
Q Consensus 427 ~~~GsL~---~~L~------------------------------~~g~~~~~~~~~~i~~~~~~~~~~~~~~-------- 465 (584)
|+- ||. .+.+ ...|+++++.|+.+...+.++..+||..
T Consensus 145 Md~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiA 223 (361)
T KOG1006|consen 145 MDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIA 223 (361)
T ss_pred Hhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHHHH
Confidence 964 542 2222 1367999999998888899999998743
Q ss_pred --cccCCCcccCccccccCCC-CCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhh
Q 007935 466 --ISAISNVYLAPEARIYGSK-FTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVK 542 (584)
Q Consensus 466 --~~~gt~~y~aPE~~~~~~~-~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~ 542 (584)
..+|...|||||.+..... |+-+|||||+|++|||+.||+.||.... ++.+.+.....+.++ .+.....
T Consensus 224 kT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~----svfeql~~Vv~gdpp---~l~~~~~- 295 (361)
T KOG1006|consen 224 KTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWD----SVFEQLCQVVIGDPP---ILLFDKE- 295 (361)
T ss_pred hhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHH----HHHHHHHHHHcCCCC---eecCccc-
Confidence 3478889999998655444 8999999999999999999999987421 233334444444433 1111111
Q ss_pred hhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 543 EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 543 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
..+....+.+++-.|+-+|..+||...++.+
T Consensus 296 ---~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 296 ---CVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred ---ccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 1122345667777899999999999988764
|
|
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.8e-25 Score=222.23 Aligned_cols=159 Identities=20% Similarity=0.264 Sum_probs=128.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC--CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG--DATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+++....+ +.||+|.+... ......+.+.+|+.++..++|+||+++++++.+++..|+||
T Consensus 6 ~~~lG~G~fg~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 6 IKVIGRGAFGEVAVVKMKHTE-----RIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred EEEEeeCCCeEEEEEEECCCC-----CEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 467999999999999987765 78999998753 12223356889999999999999999999999999999999
Q ss_pred ecccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCcc-----------
Q 007935 425 DFIRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSR----------- 465 (584)
Q Consensus 425 Ey~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~----------- 465 (584)
||+++|+|.++++. . .|+++++.|+.+..++.++..++|..
T Consensus 81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 160 (331)
T cd05624 81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQS 160 (331)
T ss_pred eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCceee
Confidence 99999999877743 1 35677777777776677777776532
Q ss_pred -cccCCCcccCccccccC----CCCCCccchhhHHHHHHHHHhCCCCCCC
Q 007935 466 -ISAISNVYLAPEARIYG----SKFTQKCDVYSFGIVLLEILTGRLPDAG 510 (584)
Q Consensus 466 -~~~gt~~y~aPE~~~~~----~~~~~ksDV~SfGvvl~ElltG~~p~~~ 510 (584)
...||..|||||++... ..++.++|||||||++|||++|+.||..
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~ 210 (331)
T cd05624 161 SVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred ccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccC
Confidence 13589999999985431 3578899999999999999999999974
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.1e-25 Score=214.98 Aligned_cols=208 Identities=17% Similarity=0.220 Sum_probs=152.1
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||.|+||.||+|.....+ ..||+|.+.... .....+.+.+|++++++++||||+++++++.+++..++|+
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 79 (258)
T cd05578 5 LRVIGKGAFGKVCIVQKRDTK-----KMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVV 79 (258)
T ss_pred EEEeccCCCceEEEEEEccCC-----cEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEE
Confidence 467999999999999987655 789999997642 2234578999999999999999999999999999999999
Q ss_pred ecccCCcHHHHHh-------------------------ccc--ccccCCCCccccccCeEEecCCCcc----------cc
Q 007935 425 DFIRNGSLYAALH-------------------------GFG--LNRLLPGTSKVTKNETIVTSGTGSR----------IS 467 (584)
Q Consensus 425 Ey~~~GsL~~~L~-------------------------~~g--~~~~~~~~~~i~~~~~~~~~~~~~~----------~~ 467 (584)
||+++++|.+++. +.| |.++.+.|+.+..+...+..+++.. ..
T Consensus 80 e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~ 159 (258)
T cd05578 80 DLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTST 159 (258)
T ss_pred eCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCcccccc
Confidence 9999999976664 222 4555555655655555666555422 23
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHH
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAK 547 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 547 (584)
.|+..|+|||++.. ..++.++||||||+++|||++|+.||...... ....+...........+..++
T Consensus 160 ~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~---------- 226 (258)
T cd05578 160 SGTPGYMAPEVLCR-QGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT--IRDQIRAKQETADVLYPATWS---------- 226 (258)
T ss_pred CCChhhcCHHHHcc-cCCCCcccchhhHHHHHHHHhCCCCCCCCCcc--HHHHHHHHhccccccCcccCc----------
Confidence 56778999998554 56899999999999999999999999854322 122222222212222222222
Q ss_pred HHHHHHHHHHhcccCCCCCCCCCh--HHHH
Q 007935 548 RQVLATFHIALNCTELDPEFRPRM--RTVS 575 (584)
Q Consensus 548 ~~~~~~~~l~~~Cl~~~P~~RPt~--~ev~ 575 (584)
..+.+++.+||+.||.+||++ +|+.
T Consensus 227 ---~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 227 ---TEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred ---HHHHHHHHHHccCChhHcCCccHHHHh
Confidence 244567788999999999999 5554
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.8e-25 Score=201.45 Aligned_cols=207 Identities=22% Similarity=0.357 Sum_probs=160.2
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcC-CCceeeeeEEEEeCCceeEeeec
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-HPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~-HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
..||.|..|.|++++.+..+ ..+|||.+.+....++.++++..+.++.+-+ .|.||+.+|||..+...++.||.
T Consensus 98 ~dlGsGtcG~V~k~~~rs~~-----~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMel 172 (391)
T KOG0983|consen 98 GDLGSGTCGQVWKMRFRSTG-----HIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMEL 172 (391)
T ss_pred HhhcCCCccceEEEEEcccc-----eEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHH
Confidence 35999999999999999876 8999999998866666788999999877764 89999999999999999999999
Q ss_pred ccCC----------cH---------------HHHH---hcccccccCCCCccccccCeEEecCCCcc----------ccc
Q 007935 427 IRNG----------SL---------------YAAL---HGFGLNRLLPGTSKVTKNETIVTSGTGSR----------ISA 468 (584)
Q Consensus 427 ~~~G----------sL---------------~~~L---~~~g~~~~~~~~~~i~~~~~~~~~~~~~~----------~~~ 468 (584)
|.-- .. ..|| |+..|++.++.|+.+...+.++..+||.+ ..+
T Consensus 173 Ms~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAhtrsA 252 (391)
T KOG0983|consen 173 MSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHTRSA 252 (391)
T ss_pred HHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeeccccccccc
Confidence 8531 11 2333 23468999999999888899999888743 357
Q ss_pred CCCcccCcccccc--CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCC---ccccChhhhhh
Q 007935 469 ISNVYLAPEARIY--GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPL---SEVIDPALVKE 543 (584)
Q Consensus 469 gt~~y~aPE~~~~--~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~---~~~~d~~~~~~ 543 (584)
|.+.|||||.+.- ...|+-++|||||||.++||.||+.||.+...+ .+.+.......++. ...+++.+
T Consensus 253 GC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~td----Fe~ltkvln~ePP~L~~~~gFSp~F--- 325 (391)
T KOG0983|consen 253 GCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTD----FEVLTKVLNEEPPLLPGHMGFSPDF--- 325 (391)
T ss_pred CCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCcc----HHHHHHHHhcCCCCCCcccCcCHHH---
Confidence 8999999997532 356899999999999999999999999874443 22333344333221 11234433
Q ss_pred hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 544 IHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 544 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+++..|+.+|+.+||...++++
T Consensus 326 ----------~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 326 ----------QSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred ----------HHHHHHHhhcCcccCcchHHHhc
Confidence 44666699999999999998875
|
|
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-24 Score=216.27 Aligned_cols=220 Identities=20% Similarity=0.307 Sum_probs=152.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcC-CCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-HPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~-HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|++|+||+|+..+.+ +.||||++.............+|+..+++++ ||||+++++++.+++..++|||
T Consensus 4 ~~~ig~g~~g~v~~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 78 (283)
T cd07830 4 IKQLGDGTFGSVYLARNKETG-----ELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFE 78 (283)
T ss_pred heeeccCCceEEEEEEECCCC-----cEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEe
Confidence 356999999999999997765 7899999876533222345678999999998 9999999999999999999999
Q ss_pred cccCCcHHHHHhc---------------------------c--cccccCCCCccccccCeEEecCCCcc----------c
Q 007935 426 FIRNGSLYAALHG---------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSR----------I 466 (584)
Q Consensus 426 y~~~GsL~~~L~~---------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~----------~ 466 (584)
|+ +|+|.++++. . .|.++.+.|+.+..+...+..+++.. .
T Consensus 79 ~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~ 157 (283)
T cd07830 79 YM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTD 157 (283)
T ss_pred cC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCCcCC
Confidence 99 8888766643 2 34556666666666666666665422 2
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhc----------------CC
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE----------------RR 530 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~----------------~~ 530 (584)
..++..|+|||++..+..++.++||||||+++|||++|+.||....... .+.. ....... ..
T Consensus 158 ~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (283)
T cd07830 158 YVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEID-QLYK-ICSVLGTPTKQDWPEGYKLASKLGF 235 (283)
T ss_pred CCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHH-HHHH-HHHhcCCCChhhhhhHhhhhccccc
Confidence 3467789999986665668999999999999999999999986532211 0000 0000000 00
Q ss_pred CCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 531 PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 531 ~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.......+.... . .....+.+++.+||+.+|++|||+.|++.
T Consensus 236 ~~~~~~~~~~~~~~-~-~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 236 RFPQFAPTSLHQLI-P-NASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred cccccccccHHHHc-c-cCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 00011111111100 0 11356788999999999999999999975
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-24 Score=215.31 Aligned_cols=206 Identities=17% Similarity=0.252 Sum_probs=147.0
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEe------CCce
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYA------NDEK 420 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~------~~~~ 420 (584)
+.||+|+||.||+|.....+ +.||+|.+..... ...++.+|+.++.++ +||||+++++++.. .+..
T Consensus 22 ~~lg~g~~~~v~~~~~~~~~-----~~~a~K~~~~~~~--~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 94 (282)
T cd06636 22 EVVGNGTYGQVYKGRHVKTG-----QLAAIKVMDVTED--EEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQL 94 (282)
T ss_pred eeeccCCCeEEEEEEEcCCC-----cEEEEEEEecChH--HHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEE
Confidence 57999999999999987765 7899999865422 236788999999999 79999999999863 4568
Q ss_pred eEeeecccCCcHHHHHh---------------------------ccc--ccccCCCCccccccCeEEecCCCcc------
Q 007935 421 LLISDFIRNGSLYAALH---------------------------GFG--LNRLLPGTSKVTKNETIVTSGTGSR------ 465 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~~L~---------------------------~~g--~~~~~~~~~~i~~~~~~~~~~~~~~------ 465 (584)
++||||+++|+|.+++. +.| |+++.+.|+.+..+..++..+++..
T Consensus 95 ~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~ 174 (282)
T cd06636 95 WLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT 174 (282)
T ss_pred EEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchhhhhcc
Confidence 99999999999976653 222 4555666666666666666666532
Q ss_pred -----cccCCCcccCcccccc----CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCcccc
Q 007935 466 -----ISAISNVYLAPEARIY----GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVI 536 (584)
Q Consensus 466 -----~~~gt~~y~aPE~~~~----~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 536 (584)
...|+..|+|||.+.. +..++.++|||||||++|||+||+.||...... ..... ...... ...
T Consensus 175 ~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~----~~~~~-~~~~~~--~~~- 246 (282)
T cd06636 175 VGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPM----RALFL-IPRNPP--PKL- 246 (282)
T ss_pred ccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHH----hhhhh-HhhCCC--CCC-
Confidence 2357888999998542 246788999999999999999999999643211 11111 111110 010
Q ss_pred ChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 537 DPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 537 d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+ ......+.+++.+||+.||.+|||+.|+++
T Consensus 247 ~~--------~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 247 KS--------KKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred cc--------cccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 00 011224566888899999999999999874
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.8e-24 Score=212.78 Aligned_cols=206 Identities=19% Similarity=0.285 Sum_probs=151.2
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeecc
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 427 (584)
+.||+|++|.||+|.....+ ..||+|.+..... ..+.+.+|++++++++|+||+++++++...+..++|+||+
T Consensus 25 ~~l~~g~~~~v~~~~~~~~~-----~~~~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 97 (286)
T cd06614 25 EKIGEGASGEVYKATDRATG-----KEVAIKKMRLRKQ--NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYM 97 (286)
T ss_pred HhccCCCCeEEEEEEEccCC-----cEEEEEEEecCch--hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEecc
Confidence 46999999999999988554 7899999986533 3478999999999999999999999999999999999999
Q ss_pred cCCcHHHHHhcc--------------------------c--ccccCCCCccccccCeEEecCCCcc-----------ccc
Q 007935 428 RNGSLYAALHGF--------------------------G--LNRLLPGTSKVTKNETIVTSGTGSR-----------ISA 468 (584)
Q Consensus 428 ~~GsL~~~L~~~--------------------------g--~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~~ 468 (584)
++++|.++++.. | |.++.+.|+.+..++.++..+++.. ...
T Consensus 98 ~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~ 177 (286)
T cd06614 98 DGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVV 177 (286)
T ss_pred CCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchhhhcccc
Confidence 999998776542 2 3445556666665566666665421 124
Q ss_pred CCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHH
Q 007935 469 ISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKR 548 (584)
Q Consensus 469 gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 548 (584)
++..|++||++. +..++.++|||||||++|||++|+.||..... ... ......... ....++. .
T Consensus 178 ~~~~y~~PE~~~-~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~----~~~-~~~~~~~~~--~~~~~~~--------~ 241 (286)
T cd06614 178 GTPYWMAPEVIK-RKDYGPKVDIWSLGIMCIEMAEGEPPYLREPP----LRA-LFLITTKGI--PPLKNPE--------K 241 (286)
T ss_pred CCcccCCHhHhc-CCCCCCccccHHHHHHHHHHHhCCCCCCCCCH----HHH-HHHHHhcCC--CCCcchh--------h
Confidence 677899999854 46789999999999999999999999864211 111 111111111 1111111 0
Q ss_pred HHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 549 QVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 549 ~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
....+.+++.+||+.+|.+|||+.++++
T Consensus 242 ~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 242 WSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred CCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 1124556888899999999999999985
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-24 Score=215.32 Aligned_cols=208 Identities=19% Similarity=0.256 Sum_probs=145.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHH-HHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEA-IARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~-l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||++....++ +.||+|+++.........++..|+.+ ++.++|||||++++++..++..++|||
T Consensus 6 ~~~ig~g~~g~v~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 6 IEELGRGAYGVVDKMRHVPTG-----TIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred EEEecccCCeEEEEEEEcCCC-----cEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 357999999999999988765 89999999765333333567777776 566699999999999999999999999
Q ss_pred cccCCcHHHHH-----------------------------hcc-c--ccccCCCCccccccCeEEecCCCccc-------
Q 007935 426 FIRNGSLYAAL-----------------------------HGF-G--LNRLLPGTSKVTKNETIVTSGTGSRI------- 466 (584)
Q Consensus 426 y~~~GsL~~~L-----------------------------~~~-g--~~~~~~~~~~i~~~~~~~~~~~~~~~------- 466 (584)
|++ |+|.+++ |+. + |+++.+.++.+..+..++..+++...
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~ 159 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVA 159 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecccccccccccc
Confidence 997 5665444 322 2 34555556556555666666665322
Q ss_pred ---ccCCCcccCccccccC---CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCc-cccChh
Q 007935 467 ---SAISNVYLAPEARIYG---SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLS-EVIDPA 539 (584)
Q Consensus 467 ---~~gt~~y~aPE~~~~~---~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~d~~ 539 (584)
..++..|+|||++... ..++.++|||||||++|||++|+.||..... ...............++ +.++
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-- 234 (283)
T cd06617 160 KTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKT---PFQQLKQVVEEPSPQLPAEKFS-- 234 (283)
T ss_pred cccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCcccc---CHHHHHHHHhcCCCCCCccccC--
Confidence 3577889999985421 3568899999999999999999999864221 12222111111111111 1111
Q ss_pred hhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 540 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
..+.+++.+||+.+|++||++.++++
T Consensus 235 -----------~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 235 -----------PEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred -----------HHHHHHHHHHccCChhhCcCHHHHhc
Confidence 24556788899999999999999985
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1e-24 Score=252.66 Aligned_cols=180 Identities=34% Similarity=0.648 Sum_probs=127.7
Q ss_pred CCCchHHHHHHHHHHHhcccCCCCCCCCCCCCCCCCCcceeeEecC-CCEEEEEcCCCCCcccCCccccCCCCCCEEEcc
Q 007935 19 CFSLNQDGLALLALKAAIAQDPTRALDSWSESDSTPCHWSGIHCIR-NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLA 97 (584)
Q Consensus 19 ~~~~~~~~~~l~~~~~~~~~~~~~~l~~w~~~~~~~c~w~gv~c~~-~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~ 97 (584)
+...++|..||++||+++. +|...+.+|+.. .+||.|.||+|+. ++|+.|+|++|+++|.++..|..+++|+.|+|+
T Consensus 24 ~~~~~~~~~~l~~~~~~~~-~~~~~~~~w~~~-~~~c~w~gv~c~~~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls 101 (968)
T PLN00113 24 SMLHAEELELLLSFKSSIN-DPLKYLSNWNSS-ADVCLWQGITCNNSSRVVSIDLSGKNISGKISSAIFRLPYIQTINLS 101 (968)
T ss_pred cCCCHHHHHHHHHHHHhCC-CCcccCCCCCCC-CCCCcCcceecCCCCcEEEEEecCCCccccCChHHhCCCCCCEEECC
Confidence 3446688999999999995 677778999654 5689999999974 689999999999999999999999999999999
Q ss_pred CCCCCCCCccccc-CCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCcc
Q 007935 98 SNNFSKPIPANLF-NATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSG 176 (584)
Q Consensus 98 ~n~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~ 176 (584)
+|+++|.+|..+. .+++|++|+|++|++++.+|. +.+++|++|+|++|.+++.+|..+.++++|+ .|+|++|.+++
T Consensus 102 ~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~-~L~L~~n~l~~ 178 (968)
T PLN00113 102 NNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLK-VLDLGGNVLVG 178 (968)
T ss_pred CCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcCCCCC-EEECccCcccc
Confidence 9999988888766 777777777777777665553 2344555555555555545555555555555 55555555544
Q ss_pred ccCccccCCCCCcEEEeecCCCccCCC
Q 007935 177 QIPEMYGHFPVMVSLDLRNNNLSGEIP 203 (584)
Q Consensus 177 ~~p~~~~~l~~L~~L~l~~N~l~~~~p 203 (584)
.+|..++++++|++|+|++|.+++.+|
T Consensus 179 ~~p~~~~~l~~L~~L~L~~n~l~~~~p 205 (968)
T PLN00113 179 KIPNSLTNLTSLEFLTLASNQLVGQIP 205 (968)
T ss_pred cCChhhhhCcCCCeeeccCCCCcCcCC
Confidence 445444455555555555554444443
|
|
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-24 Score=219.97 Aligned_cols=224 Identities=20% Similarity=0.250 Sum_probs=151.6
Q ss_pred ceeceeecCceEEEEEecC--CCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC--Cce
Q 007935 347 AYVVGKSKNGIMYKVVVGR--GSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN--DEK 420 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~--~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~--~~~ 420 (584)
...||+|+||.||+|.... .+ ..||+|.+.... .....+.+.+|++++++++||||+++++++.+. +..
T Consensus 5 ~~~ig~g~~g~v~~~~~~~~~~~-----~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 79 (316)
T cd07842 5 EGCIGRGTYGRVYKAKRKNGKDG-----KEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSV 79 (316)
T ss_pred EEEeccCCcEEEEEEEecCCCCC-----CeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceE
Confidence 3569999999999999876 33 799999998742 122236788999999999999999999999988 789
Q ss_pred eEeeecccCCcHHHH------------------------------Hhccc--ccccCCCCccccc----cCeEEecCCCc
Q 007935 421 LLISDFIRNGSLYAA------------------------------LHGFG--LNRLLPGTSKVTK----NETIVTSGTGS 464 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~~------------------------------L~~~g--~~~~~~~~~~i~~----~~~~~~~~~~~ 464 (584)
++||||+++ +|.++ ||..+ |+++.+.|+.+.. ++.++..+++.
T Consensus 80 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~ 158 (316)
T cd07842 80 YLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGL 158 (316)
T ss_pred EEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCcc
Confidence 999999975 45333 33333 4566666766666 56666666653
Q ss_pred cc--------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCC--------cHHHHH
Q 007935 465 RI--------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGK--------GLESLV 522 (584)
Q Consensus 465 ~~--------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~--------~l~~~~ 522 (584)
.. ..++..|+|||++.....++.++|||||||++|||++|+.||.....+.. .+..++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (316)
T cd07842 159 ARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIF 238 (316)
T ss_pred ccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHH
Confidence 21 24577899999865545689999999999999999999999976443320 011111
Q ss_pred HHHhhcCC-------CCc-----------cccC-hhhhhhhhH-HHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 523 RKAFRERR-------PLS-----------EVID-PALVKEIHA-KRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 523 ~~~~~~~~-------~~~-----------~~~d-~~~~~~~~~-~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
........ ..+ ...+ ..+...... .....++.+++.+|++.||++|||+.|+++
T Consensus 239 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 239 EVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 10000000 000 0000 011000000 022346788999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.9e-24 Score=215.91 Aligned_cols=218 Identities=18% Similarity=0.244 Sum_probs=148.4
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc-chhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~-~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|++|.||+|.....+ +.||+|.+..... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 7 ~~~l~~g~~~~v~~~~~~~~~-----~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 7 VEKIGEGTYGVVYKARDRVTN-----ETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred EEEecCCCCEEEEEEEecCCC-----cEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 357999999999999987655 7899999876422 2233678899999999999999999999999999999999
Q ss_pred cccCCcHHHHH---------------------------hccc--ccccCCCCcccccc-CeEEecCCCccc---------
Q 007935 426 FIRNGSLYAAL---------------------------HGFG--LNRLLPGTSKVTKN-ETIVTSGTGSRI--------- 466 (584)
Q Consensus 426 y~~~GsL~~~L---------------------------~~~g--~~~~~~~~~~i~~~-~~~~~~~~~~~~--------- 466 (584)
|+++ +|.+++ |+.+ |+++.+.|+.+... ..++..+++...
T Consensus 82 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~~ 160 (294)
T PLN00009 82 YLDL-DLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTF 160 (294)
T ss_pred cccc-cHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCcccc
Confidence 9964 664443 4333 45666666666532 345566655321
Q ss_pred --ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccc---------
Q 007935 467 --SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEV--------- 535 (584)
Q Consensus 467 --~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~--------- 535 (584)
..++..|+|||++..+..++.++|||||||++|||+||+.||..... ...+.........+....
T Consensus 161 ~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (294)
T PLN00009 161 THEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSE----IDELFKIFRILGTPNEETWPGVTSLPD 236 (294)
T ss_pred ccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHHHhCCCChhhccccccchh
Confidence 24567899999865545688999999999999999999999975322 111111000000000000
Q ss_pred --------cChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 536 --------IDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 536 --------~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
........ ......++.+++.+|++.+|++||++.++++
T Consensus 237 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 237 YKSAFPKWPPKDLATV--VPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred hhhhcccCCCCCHHHh--CcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00000000 0011234677899999999999999999985
|
|
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2e-25 Score=207.69 Aligned_cols=199 Identities=21% Similarity=0.292 Sum_probs=160.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC--CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG--DATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
-+++|+|.||+|-.++-+..+ +.+|+|++++. ....++..-+.|-.+|...+||.+..|.-.|+..+..++||
T Consensus 173 LKvLGkGTFGKVIL~rEKat~-----k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVM 247 (516)
T KOG0690|consen 173 LKVLGKGTFGKVILCREKATG-----KLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVM 247 (516)
T ss_pred HHHhcCCccceEEEEeecccC-----ceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEE
Confidence 468999999999999988876 89999999886 22233344567889999999999999999999999999999
Q ss_pred ecccCCcHH-------------------------HHHhcccc--cccCCCCccccccCeEEecCCCc-----------cc
Q 007935 425 DFIRNGSLY-------------------------AALHGFGL--NRLLPGTSKVTKNETIVTSGTGS-----------RI 466 (584)
Q Consensus 425 Ey~~~GsL~-------------------------~~L~~~g~--~~~~~~~~~i~~~~~~~~~~~~~-----------~~ 466 (584)
||+.||.|+ .|||..++ ++++.+|..+..|+++++.+||. ..
T Consensus 248 eyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~t~kT 327 (516)
T KOG0690|consen 248 EYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGDTTKT 327 (516)
T ss_pred EEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhcccccceecc
Confidence 999999995 44454443 66777788888889999988863 34
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhH
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 546 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 546 (584)
.+||+.|+|||++.. ..|+.++|.|..|||+|||+.|+.||...+. ..+...+.-....++..++++.+..+..
T Consensus 328 FCGTPEYLAPEVleD-nDYgraVDWWG~GVVMYEMmCGRLPFyn~dh-----~kLFeLIl~ed~kFPr~ls~eAktLLsG 401 (516)
T KOG0690|consen 328 FCGTPEYLAPEVLED-NDYGRAVDWWGVGVVMYEMMCGRLPFYNKDH-----EKLFELILMEDLKFPRTLSPEAKTLLSG 401 (516)
T ss_pred ccCChhhcCchhhcc-ccccceeehhhhhHHHHHHHhccCcccccch-----hHHHHHHHhhhccCCccCCHHHHHHHHH
Confidence 689999999999665 6899999999999999999999999985433 3344444555555777788887665544
Q ss_pred HHHHHHHHHHHhcccCCCCCCCC
Q 007935 547 KRQVLATFHIALNCTELDPEFRP 569 (584)
Q Consensus 547 ~~~~~~~~~l~~~Cl~~~P~~RP 569 (584)
.+.+||.+|.
T Consensus 402 -------------LL~kdP~kRL 411 (516)
T KOG0690|consen 402 -------------LLKKDPKKRL 411 (516)
T ss_pred -------------HhhcChHhhc
Confidence 7899999994
|
|
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.4e-25 Score=224.75 Aligned_cols=223 Identities=16% Similarity=0.218 Sum_probs=150.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCC-----cee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAND-----EKL 421 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~-----~~~ 421 (584)
.+.||+|+||.||+|.....+ +.||||+++........+.+.+|+.++++++||||+++++++...+ ..+
T Consensus 10 ~~~lg~G~~g~vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 84 (336)
T cd07849 10 LSYIGEGAYGMVCSATHKPTG-----VKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVY 84 (336)
T ss_pred EEEEEecCCeEEEEEEEcCCC-----CeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEE
Confidence 467999999999999987665 7999999975433334467889999999999999999999876543 479
Q ss_pred EeeecccCCcHHHH------------------------Hhccc--ccccCCCCccccccCeEEecCCCcc----------
Q 007935 422 LISDFIRNGSLYAA------------------------LHGFG--LNRLLPGTSKVTKNETIVTSGTGSR---------- 465 (584)
Q Consensus 422 lV~Ey~~~GsL~~~------------------------L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~---------- 465 (584)
+||||+++ +|.++ ||..| |+++.+.|+.+..+...+..+++..
T Consensus 85 lv~e~~~~-~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~ 163 (336)
T cd07849 85 IVQELMET-DLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHT 163 (336)
T ss_pred EEehhccc-CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeecccccccc
Confidence 99999975 66443 44444 5667777776666666666665532
Q ss_pred ----cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC--CccccChh
Q 007935 466 ----ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP--LSEVIDPA 539 (584)
Q Consensus 466 ----~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~d~~ 539 (584)
...||..|+|||++.....++.++|||||||++|||++|+.||.+.... .....+......... .....+..
T Consensus 164 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (336)
T cd07849 164 GFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYL--HQLNLILGVLGTPSQEDLNCIISLR 241 (336)
T ss_pred CCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHcCCCCHHHHHHhhchh
Confidence 1256788999998655456899999999999999999999999653211 111111111110000 00000000
Q ss_pred hhhhh-------------hHHHHHHHHHHHHhcccCCCCCCCCChHHHHHH
Q 007935 540 LVKEI-------------HAKRQVLATFHIALNCTELDPEFRPRMRTVSES 577 (584)
Q Consensus 540 ~~~~~-------------~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 577 (584)
..... .......++.+++.+||+.+|++|||+.|+++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 242 ARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred hhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00000 000113457789999999999999999999864
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=99.92 E-value=2e-24 Score=216.16 Aligned_cols=221 Identities=16% Similarity=0.218 Sum_probs=153.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcc----hhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeE
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT----WRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLL 422 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~----~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~l 422 (584)
.+.||+|++|.||+|.....+ +.||||+++..... ...+.+.+|++++++++|+||+++++++.+.+..++
T Consensus 5 ~~~lg~g~~~~vy~~~~~~~~-----~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l 79 (298)
T cd07841 5 GKKLGEGTYAVVYKARDKETG-----RIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINL 79 (298)
T ss_pred eeeeeeccccEEEEEEECCCC-----cEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEE
Confidence 357999999999999987654 79999999765322 123567889999999999999999999999999999
Q ss_pred eeecccCCcHHHHHhc--------------------------cc--ccccCCCCccccccCeEEecCCCccc--------
Q 007935 423 ISDFIRNGSLYAALHG--------------------------FG--LNRLLPGTSKVTKNETIVTSGTGSRI-------- 466 (584)
Q Consensus 423 V~Ey~~~GsL~~~L~~--------------------------~g--~~~~~~~~~~i~~~~~~~~~~~~~~~-------- 466 (584)
||||+ +|+|.++++. .| |.++.+.|+.+..++.++..+++...
T Consensus 80 v~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~ 158 (298)
T cd07841 80 VFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRK 158 (298)
T ss_pred EEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCCcc
Confidence 99999 8899766643 23 46666677766666666666655322
Q ss_pred ---ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC--------CCccc
Q 007935 467 ---SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR--------PLSEV 535 (584)
Q Consensus 467 ---~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~--------~~~~~ 535 (584)
..++..|+|||.+.....++.++|||||||++|||++|.+||..... ...+...... ..... .....
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 236 (298)
T cd07841 159 MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSD-IDQLGKIFEA-LGTPTEENWPGVTSLPDY 236 (298)
T ss_pred ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCcc-HHHHHHHHHH-cCCCchhhhhhccccccc
Confidence 23566799999865545688999999999999999999877764321 1111111111 00000 00000
Q ss_pred ------cChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHH
Q 007935 536 ------IDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSES 577 (584)
Q Consensus 536 ------~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 577 (584)
.+...... .......+.+++.+||+.||++|||+.|+++.
T Consensus 237 ~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 237 VEFKPFPPTPLKQI--FPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred ccccccCCcchhhh--cccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 00000000 01123467789999999999999999999863
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.4e-24 Score=211.08 Aligned_cols=210 Identities=17% Similarity=0.209 Sum_probs=145.0
Q ss_pred eceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHH-HhcCCCceeeeeEEEEeCCceeEeee
Q 007935 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAI-ARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 349 ~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l-~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.||+|+||.||+|.....+ +.||||.++... .......+..|..++ ...+||||+++++++.+++..++|||
T Consensus 3 ~l~~g~~~~v~~a~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e 77 (260)
T cd05611 3 PISKGAFGSVYLAKKRSTG-----DYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVME 77 (260)
T ss_pred cCCcCCCeeEEEEEecCCC-----CeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEe
Confidence 5899999999999987655 799999987542 122223455665554 44589999999999999999999999
Q ss_pred cccCCcHHHHHhc-------------------------cc--ccccCCCCccccccCeEEecCCCcc-------cccCCC
Q 007935 426 FIRNGSLYAALHG-------------------------FG--LNRLLPGTSKVTKNETIVTSGTGSR-------ISAISN 471 (584)
Q Consensus 426 y~~~GsL~~~L~~-------------------------~g--~~~~~~~~~~i~~~~~~~~~~~~~~-------~~~gt~ 471 (584)
|+++|+|.++++. .+ |.++.+.|+.+..+..++..+++.. ...++.
T Consensus 78 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 157 (260)
T cd05611 78 YLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTP 157 (260)
T ss_pred ccCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccccccCCCCc
Confidence 9999999766642 22 4555556665655566666666532 235788
Q ss_pred cccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHHHHH
Q 007935 472 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVL 551 (584)
Q Consensus 472 ~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 551 (584)
.|+|||.... ..++.++||||||+++|||+||..||..... ...................+. ...
T Consensus 158 ~y~~pe~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~---------~~~ 222 (260)
T cd05611 158 DYLAPETILG-VGDDKMSDWWSLGCVIFEFLFGYPPFHAETP-----DAVFDNILSRRINWPEEVKEF---------CSP 222 (260)
T ss_pred CccChhhhcC-CCCcchhhhHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHhcccCCCCccccc---------CCH
Confidence 8999999554 5689999999999999999999999974321 222222221111111111111 112
Q ss_pred HHHHHHhcccCCCCCCCCChHHHHHHH
Q 007935 552 ATFHIALNCTELDPEFRPRMRTVSESL 578 (584)
Q Consensus 552 ~~~~l~~~Cl~~~P~~RPt~~ev~~~L 578 (584)
.+.+++.+||+.+|++||++.++.+.|
T Consensus 223 ~~~~~i~~~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 223 EAVDLINRLLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred HHHHHHHHHccCCHHHccCCCcHHHHH
Confidence 455688889999999999876555443
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.6e-24 Score=213.86 Aligned_cols=220 Identities=17% Similarity=0.253 Sum_probs=151.7
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC--CceeEee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN--DEKLLIS 424 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~--~~~~lV~ 424 (584)
+.||+|++|.||+|.....+ +.||+|++.... .....+.+.+|++++++++|||++++++++.+. +..++||
T Consensus 5 ~~l~~g~~~~vy~~~~~~~~-----~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 79 (287)
T cd07840 5 AQIGEGTYGQVYKARNKKTG-----ELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVF 79 (287)
T ss_pred EEeccCCCeEEEEEEECCCC-----eEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEe
Confidence 56999999999999988765 899999998753 233346789999999999999999999999988 8899999
Q ss_pred ecccCCcHHHHH--------------------------hccc--ccccCCCCccccccCeEEecCCCcc-----------
Q 007935 425 DFIRNGSLYAAL--------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSR----------- 465 (584)
Q Consensus 425 Ey~~~GsL~~~L--------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~----------- 465 (584)
||+++ +|.+++ |+.| |.++.+.|+.+..+..++..+++..
T Consensus 80 e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~ 158 (287)
T cd07840 80 EYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADY 158 (287)
T ss_pred ccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCcccc
Confidence 99985 775544 3333 4555566666666666666665422
Q ss_pred -cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC--CCc---------
Q 007935 466 -ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR--PLS--------- 533 (584)
Q Consensus 466 -~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~--~~~--------- 533 (584)
...++..|+|||.+.....++.++||||||+++|||+||+.||...... ..+.. ......... ...
T Consensus 159 ~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 236 (287)
T cd07840 159 TNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTEL-EQLEK-IFELCGSPTDENWPGVSKLPWFE 236 (287)
T ss_pred cccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHH-HHHHhCCCchhhccccccchhhh
Confidence 1245677999997554456889999999999999999999999753221 11111 111110000 000
Q ss_pred -----cccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 534 -----EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 534 -----~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
......+.. .........+.+++.+||..+|++||++.++++
T Consensus 237 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 237 NLKPKKPYKRRLRE-FFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred hccccccchhHHHH-HhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 000011100 001112457789999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.5e-24 Score=216.04 Aligned_cols=214 Identities=20% Similarity=0.224 Sum_probs=144.3
Q ss_pred cCceEEEEEecCCCCCCCceEEEEEEecCC-CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeecccCCcH
Q 007935 354 KNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432 (584)
Q Consensus 354 ~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~GsL 432 (584)
++|.||.++....+ +.||||+++.. ......+.+.+|++++++++||||+++++++.+++..+++|||+++|+|
T Consensus 12 ~~~~v~~~~~~~~~-----~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l 86 (314)
T cd08216 12 DLMIVHLAKHKPTN-----TLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSC 86 (314)
T ss_pred CCceEEEEEecCCC-----CEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCH
Confidence 34455555544443 79999999765 3344457899999999999999999999999999999999999999999
Q ss_pred HHHHhc---------------------------c--cccccCCCCccccccCeEEecCCCcc------------------
Q 007935 433 YAALHG---------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSR------------------ 465 (584)
Q Consensus 433 ~~~L~~---------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~------------------ 465 (584)
.++++. . -|+++.++|+.+..++.++..+++..
T Consensus 87 ~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~ 166 (314)
T cd08216 87 EDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPK 166 (314)
T ss_pred HHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeeccccccccccccccc
Confidence 766642 2 35667777777766555555554321
Q ss_pred cccCCCcccCccccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC-------------
Q 007935 466 ISAISNVYLAPEARIYG-SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP------------- 531 (584)
Q Consensus 466 ~~~gt~~y~aPE~~~~~-~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~------------- 531 (584)
...++..|+|||++... ..++.++|||||||++|||++|+.||...... .............
T Consensus 167 ~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
T cd08216 167 SSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPAT----QMLLEKVRGTVPCLLDKSTYPLYEDS 242 (314)
T ss_pred cccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHhccCccccccCchhhhcCC
Confidence 12456679999986442 35889999999999999999999999753221 1111111100000
Q ss_pred Ccc----ccChhhh---hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 532 LSE----VIDPALV---KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 532 ~~~----~~d~~~~---~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
... ..++... ...........+.+++.+||+.||++|||+.|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 243 MSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred cCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence 000 0000000 00011122346778999999999999999999985
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.9e-24 Score=212.11 Aligned_cols=208 Identities=20% Similarity=0.292 Sum_probs=147.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCC------c
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYAND------E 419 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~------~ 419 (584)
.+.||+|++|.||+|.....+ +.+++|.+..... ..+.|.+|+.+++++ +|+||+++++++.+.. .
T Consensus 11 ~~~l~~g~~~~v~~~~~~~~~-----~~~~~k~~~~~~~--~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~ 83 (275)
T cd06608 11 VEVIGEGTYGKVYKARHKKTG-----QLVAIKIMDIIED--EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQ 83 (275)
T ss_pred eeeecCCCCeEEEEEEECCCC-----cEEEEEEEecCch--hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceE
Confidence 357999999999999987654 7899999876433 237799999999999 7999999999997654 4
Q ss_pred eeEeeecccCCcHHHHHhc-----------------------------cc--ccccCCCCccccccCeEEecCCCcc---
Q 007935 420 KLLISDFIRNGSLYAALHG-----------------------------FG--LNRLLPGTSKVTKNETIVTSGTGSR--- 465 (584)
Q Consensus 420 ~~lV~Ey~~~GsL~~~L~~-----------------------------~g--~~~~~~~~~~i~~~~~~~~~~~~~~--- 465 (584)
.++||||+++++|.++++. .| |.++.+.|+.+..+..++..+++..
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~ 163 (275)
T cd06608 84 LWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQL 163 (275)
T ss_pred EEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccceec
Confidence 8999999999998766542 22 3444555555655566666666532
Q ss_pred --------cccCCCcccCcccccc----CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCc
Q 007935 466 --------ISAISNVYLAPEARIY----GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLS 533 (584)
Q Consensus 466 --------~~~gt~~y~aPE~~~~----~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 533 (584)
...|+..|+|||++.. ...++.++|||||||++|||+||+.||..... .... ........ .
T Consensus 164 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~~-~~~~~~~~--~ 236 (275)
T cd06608 164 DSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHP----MRAL-FKIPRNPP--P 236 (275)
T ss_pred ccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccch----HHHH-HHhhccCC--C
Confidence 2357788999998532 23578899999999999999999999964221 1111 11111111 1
Q ss_pred cccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 534 EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 534 ~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
....+. .....+.+++.+||..||++|||+.|+++
T Consensus 237 ~~~~~~--------~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 237 TLKSPE--------NWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred CCCchh--------hcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 111111 12234567888899999999999999975
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.3e-24 Score=216.85 Aligned_cols=222 Identities=15% Similarity=0.174 Sum_probs=146.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc-chhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCc------
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDE------ 419 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~-~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~------ 419 (584)
...||+|+||.||+|.....+ +.||||.+..... ......+.+|++++++++||||++++++|...+.
T Consensus 17 ~~~lg~g~~~~v~~~~~~~~~-----~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 91 (310)
T cd07865 17 LAKIGQGTFGEVFKARHKKTK-----QIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK 91 (310)
T ss_pred EEEeecCCCEEEEEEEECCCC-----cEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence 357999999999999987665 8999999875422 2223456789999999999999999999877543
Q ss_pred --eeEeeecccCCcHHHH--------------------------Hhccc--ccccCCCCccccccCeEEecCCCcc----
Q 007935 420 --KLLISDFIRNGSLYAA--------------------------LHGFG--LNRLLPGTSKVTKNETIVTSGTGSR---- 465 (584)
Q Consensus 420 --~~lV~Ey~~~GsL~~~--------------------------L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~---- 465 (584)
.++||||+.+ +|.++ ||+.| |+++.+.|+.+..+..++..+++..
T Consensus 92 ~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 170 (310)
T cd07865 92 GSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLARAFS 170 (310)
T ss_pred ceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCccccc
Confidence 4999999975 66444 34444 4556666666666666666665522
Q ss_pred -----------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC--C
Q 007935 466 -----------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP--L 532 (584)
Q Consensus 466 -----------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~--~ 532 (584)
...++..|+|||++.....++.++||||||+++|||+||+.||...... .....+........+ .
T Consensus 171 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 248 (310)
T cd07865 171 LSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQ--HQLTLISQLCGSITPEVW 248 (310)
T ss_pred CCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCChhhc
Confidence 1235677999998655445789999999999999999999998753221 111111111110000 0
Q ss_pred ccc--------------cChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 533 SEV--------------IDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 533 ~~~--------------~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+.. .................+.+++.+||..||++|||++|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 249 PGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred ccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 000 00000000000001234568999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.1e-25 Score=205.31 Aligned_cols=224 Identities=20% Similarity=0.277 Sum_probs=160.5
Q ss_pred chhhHhhhcceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEe
Q 007935 338 ELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYA 416 (584)
Q Consensus 338 ~~~~l~~~~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~ 416 (584)
+++|+.+-+++++|+|+|+.|-.++...++ ..+|||++.+. ....+.+..||++++... .|+||++|++||++
T Consensus 74 ~F~d~YkLt~e~LGeGAyasVqtcv~i~t~-----~EYAVKiidKq-~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEd 147 (463)
T KOG0607|consen 74 KFEDMYKLTSELLGEGAYASVQTCVSIQTG-----KEYAVKIIDKQ-PGHSRSRVFREVETFYQCQGHKNILQLIEFFED 147 (463)
T ss_pred hHHHHHHhHHHHhcCccceeeeeeeeeccc-----hhhhhhhhhcC-CchHHHHHHHHHHHHHHhcCCccHHHHHHHhcc
Confidence 467888889999999999999998876665 89999999875 444568899999999998 69999999999999
Q ss_pred CCceeEeeecccCCcHHHHH-------------------------hccc--ccccCCCCcccccc---CeEEecCC--Cc
Q 007935 417 NDEKLLISDFIRNGSLYAAL-------------------------HGFG--LNRLLPGTSKVTKN---ETIVTSGT--GS 464 (584)
Q Consensus 417 ~~~~~lV~Ey~~~GsL~~~L-------------------------~~~g--~~~~~~~~~~i~~~---~~~~~~~~--~~ 464 (584)
+...|||||-|.||.|..++ |+.| |++++++|+.-... ..+++.++ |+
T Consensus 148 d~~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgS 227 (463)
T KOG0607|consen 148 DTRFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGS 227 (463)
T ss_pred cceEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeecccccc
Confidence 99999999999999996555 4445 46778877643222 22333222 11
Q ss_pred ----------------ccccCCCcccCccccc----cCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCc-------
Q 007935 465 ----------------RISAISNVYLAPEARI----YGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKG------- 517 (584)
Q Consensus 465 ----------------~~~~gt~~y~aPE~~~----~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~------- 517 (584)
...+|+..|||||+.. ....|+.++|.||+|||||-|+.|-+||.+.-..+..
T Consensus 228 g~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~C 307 (463)
T KOG0607|consen 228 GIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVC 307 (463)
T ss_pred ccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCcc
Confidence 1246788899999742 2246899999999999999999999999875443222
Q ss_pred ---HHHHHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 518 ---LESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 518 ---l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
-..++..+..+...+++ .++.. +. .+..+++...+..|+.+|-++.++++
T Consensus 308 r~CQ~~LFesIQEGkYeFPd---kdWah-IS-----~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 308 RVCQNKLFESIQEGKYEFPD---KDWAH-IS-----SEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred HHHHHHHHHHHhccCCcCCh---hhhHH-hh-----HHHHHHHHHHHhccHHhhhhhhhccC
Confidence 12233344344443333 22211 11 12334555567789999998888875
|
|
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-24 Score=221.66 Aligned_cols=220 Identities=17% Similarity=0.187 Sum_probs=149.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcch-------------hhHhHHHHHHHHHhcCCCceeeeeEE
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATW-------------RFKDFESEVEAIARVQHPNIVRLKAF 413 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~-------------~~~~f~~Ei~~l~~l~HpnIV~l~g~ 413 (584)
.++||+|+||.||+|.....+ +.||||.++...... ....+.+|++++++++||||++++++
T Consensus 14 ~~~ig~G~~g~vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 88 (335)
T PTZ00024 14 GAHLGEGTYGKVEKAYDTLTG-----KIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDV 88 (335)
T ss_pred hhcccCCCceeEEEEEECCCC-----CeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEE
Confidence 457999999999999987655 799999987542211 01257899999999999999999999
Q ss_pred EEeCCceeEeeecccCCcHHHHH-------------------------hccc--ccccCCCCccccccCeEEecCCCccc
Q 007935 414 YYANDEKLLISDFIRNGSLYAAL-------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSRI 466 (584)
Q Consensus 414 ~~~~~~~~lV~Ey~~~GsL~~~L-------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~ 466 (584)
+...+..++||||++ |+|.+++ |..| |+++.+.|+.+..+..++..+++...
T Consensus 89 ~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg~~~ 167 (335)
T PTZ00024 89 YVEGDFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLAR 167 (335)
T ss_pred EecCCcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCcccee
Confidence 999999999999997 5776554 3333 45566666666555556655554321
Q ss_pred -------------------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHH
Q 007935 467 -------------------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESL 521 (584)
Q Consensus 467 -------------------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~ 521 (584)
..++..|+|||++.....++.++|||||||++|||+||+.||....... .+...
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~-~~~~i 246 (335)
T PTZ00024 168 RYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEID-QLGRI 246 (335)
T ss_pred ecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHH
Confidence 1346779999986554557999999999999999999999997532211 11111
Q ss_pred HHHHhhcCCC--Cc------------cccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 522 VRKAFRERRP--LS------------EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 522 ~~~~~~~~~~--~~------------~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
......... ++ ....+...... ......+.+++.+||+.+|++|||+.|++.
T Consensus 247 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 247 -FELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIF--PNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred -HHHhCCCchhhCcchhhcccccccCcCCcccHHHhC--cCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 111110000 00 00011111100 012345778999999999999999999985
|
|
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.2e-24 Score=213.98 Aligned_cols=208 Identities=19% Similarity=0.286 Sum_probs=149.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|+...++ ..||+|++.... .....+.+.+|++++++++|||++++++++.+.+..++||
T Consensus 26 ~~~lg~g~~g~v~~~~~~~~~-----~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 100 (313)
T cd06633 26 LHEIGHGSFGAVYFATNSHTN-----EVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVM 100 (313)
T ss_pred ceeeccCCCeEEEEEEECCCC-----cEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEE
Confidence 356999999999999987665 799999987542 2233467889999999999999999999999999999999
Q ss_pred ecccCCcHHHH--------------------------Hhccc--ccccCCCCccccccCeEEecCCCcc-------cccC
Q 007935 425 DFIRNGSLYAA--------------------------LHGFG--LNRLLPGTSKVTKNETIVTSGTGSR-------ISAI 469 (584)
Q Consensus 425 Ey~~~GsL~~~--------------------------L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~-------~~~g 469 (584)
||+. |++.++ ||+.| |.++.+.|+.+..+..++..+++.. ...|
T Consensus 101 e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~~~~~ 179 (313)
T cd06633 101 EYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFVG 179 (313)
T ss_pred ecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccCCCCCccc
Confidence 9996 465433 34434 4566667766666666666666532 2357
Q ss_pred CCcccCccccc--cCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHH
Q 007935 470 SNVYLAPEARI--YGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAK 547 (584)
Q Consensus 470 t~~y~aPE~~~--~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 547 (584)
+..|+|||++. .+..++.++|||||||++|||++|+.||..... ............ +....+...
T Consensus 180 ~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~-----~~~~~~~~~~~~--~~~~~~~~~------ 246 (313)
T cd06633 180 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-----MSALYHIAQNDS--PTLQSNEWT------ 246 (313)
T ss_pred cccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHHhcCC--CCCCccccC------
Confidence 78899999863 235688999999999999999999999875321 111112221111 111111111
Q ss_pred HHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 548 RQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 548 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
..+.+++.+||+.+|.+||++.+++.
T Consensus 247 ---~~l~~li~~~l~~~P~~Rp~~~~~l~ 272 (313)
T cd06633 247 ---DSFRGFVDYCLQKIPQERPASAELLR 272 (313)
T ss_pred ---HHHHHHHHHHccCChhhCcCHHHHhc
Confidence 13455778899999999999999985
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.4e-24 Score=209.99 Aligned_cols=201 Identities=16% Similarity=0.231 Sum_probs=143.4
Q ss_pred ceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEeeeccc
Q 007935 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISDFIR 428 (584)
Q Consensus 350 iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~Ey~~ 428 (584)
+|+|+||.||++....++ ..+|+|.+....... .|+.....+ +||||+++++++..++..++||||++
T Consensus 24 lg~g~~g~v~~~~~~~~~-----~~~~~k~~~~~~~~~------~e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~ 92 (267)
T PHA03390 24 LIDGKFGKVSVLKHKPTQ-----KLFVQKIIKAKNFNA------IEPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIK 92 (267)
T ss_pred ecCCCceEEEEEEEcCCC-----cEEEEEEEehhhcch------hhHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCC
Confidence 799999999999987765 789999987542211 123222222 79999999999999999999999999
Q ss_pred CCcHHHHHhc-------------------------cc--ccccCCCCccccccC-eEEecCCCcc-------cccCCCcc
Q 007935 429 NGSLYAALHG-------------------------FG--LNRLLPGTSKVTKNE-TIVTSGTGSR-------ISAISNVY 473 (584)
Q Consensus 429 ~GsL~~~L~~-------------------------~g--~~~~~~~~~~i~~~~-~~~~~~~~~~-------~~~gt~~y 473 (584)
+|+|.++++. .| |+++.+.|..+..+. .+...+++.. ...++..|
T Consensus 93 ~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~y 172 (267)
T PHA03390 93 DGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPSCYDGTLDY 172 (267)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCCccCCCCCcc
Confidence 9999877643 22 456666666665555 5666666532 23578899
Q ss_pred cCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHHHHHHH
Q 007935 474 LAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLAT 553 (584)
Q Consensus 474 ~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 553 (584)
+|||++.. ..++.++|||||||++|||++|+.||.....+......+.... ....+..+..++.+
T Consensus 173 ~aPE~~~~-~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~------------- 237 (267)
T PHA03390 173 FSPEKIKG-HNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-QKKLPFIKNVSKNA------------- 237 (267)
T ss_pred cChhhhcC-CCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-cccCCcccccCHHH-------------
Confidence 99999654 6789999999999999999999999985443333333443332 22222233344443
Q ss_pred HHHHhcccCCCCCCCCC-hHHHHH
Q 007935 554 FHIALNCTELDPEFRPR-MRTVSE 576 (584)
Q Consensus 554 ~~l~~~Cl~~~P~~RPt-~~ev~~ 576 (584)
.+++.+||+.+|.+||+ ++|+++
T Consensus 238 ~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 238 NDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred HHHHHHHhccChhhCCchHHHHhc
Confidence 44666799999999996 688874
|
|
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.4e-24 Score=215.04 Aligned_cols=221 Identities=17% Similarity=0.235 Sum_probs=148.5
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc-chhhHhHHHHHHHHHhcCCCceeeeeEEEEeC--CceeEee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPNIVRLKAFYYAN--DEKLLIS 424 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~-~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~--~~~~lV~ 424 (584)
+.||+|+||.||+|.....+ +.||+|.++.... ......+.+|++++++++||||+++++++... +..++||
T Consensus 11 ~~lg~g~~~~v~~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~ 85 (293)
T cd07843 11 NRIEEGTYGVVYRARDKKTG-----EIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVM 85 (293)
T ss_pred hhhcCCCCeEEEEEEECCCC-----cEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEe
Confidence 56999999999999987665 7899999976422 22234678999999999999999999999887 8899999
Q ss_pred ecccCCcHHHHH--------------------------hccc--ccccCCCCccccccCeEEecCCCcc-----------
Q 007935 425 DFIRNGSLYAAL--------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSR----------- 465 (584)
Q Consensus 425 Ey~~~GsL~~~L--------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~----------- 465 (584)
||+++ +|.+++ |+.| |.++.++|+.+..++.++..+++..
T Consensus 86 e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~ 164 (293)
T cd07843 86 EYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKPYT 164 (293)
T ss_pred hhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCccccc
Confidence 99974 775544 3333 4556666666666566666665422
Q ss_pred cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcC----------------
Q 007935 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER---------------- 529 (584)
Q Consensus 466 ~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~---------------- 529 (584)
...++..|+|||.+.....++.++|||||||++|||++|+.||...... ..+..... .....
T Consensus 165 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 242 (293)
T cd07843 165 QLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEI-DQLNKIFK-LLGTPTEKIWPGFSELPGAKK 242 (293)
T ss_pred cccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHH-HhCCCchHHHHHhhccchhcc
Confidence 1246778999998655445789999999999999999999999753221 11111110 00000
Q ss_pred CCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 530 RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 530 ~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
..........+............+.+++..||+.+|++|||+.|++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 243 KTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred cccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 00000000000000000001234567888999999999999999975
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.5e-24 Score=206.56 Aligned_cols=207 Identities=19% Similarity=0.286 Sum_probs=151.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc-chhhHhHHHHHHHHHhcCCCceeeeeEEEEeC--CceeEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPNIVRLKAFYYAN--DEKLLI 423 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~-~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~--~~~~lV 423 (584)
.+.||+|++|.||+|.....+ +.|++|.+..... ....+.+.+|++++++++||||+++++++.+. +..++|
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 79 (260)
T cd06606 5 GELLGRGSFGSVYLALDKDTG-----ELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIF 79 (260)
T ss_pred eeEeeecCceEEEEEEECCCC-----cEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEE
Confidence 367999999999999988655 7999999876532 23457899999999999999999999999988 889999
Q ss_pred eecccCCcHHHHHhc-------------------------cc--ccccCCCCccccccCeEEecCCCc------------
Q 007935 424 SDFIRNGSLYAALHG-------------------------FG--LNRLLPGTSKVTKNETIVTSGTGS------------ 464 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~~-------------------------~g--~~~~~~~~~~i~~~~~~~~~~~~~------------ 464 (584)
|||+++++|.+++.. .| |.++.+.++.+..++..+..+++.
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~ 159 (260)
T cd06606 80 LEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEG 159 (260)
T ss_pred EEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEeccccccccc
Confidence 999999999776643 22 344444555555555555555432
Q ss_pred -ccccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhh--cCCCCccccChhhh
Q 007935 465 -RISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR--ERRPLSEVIDPALV 541 (584)
Q Consensus 465 -~~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~d~~~~ 541 (584)
....++..|+|||.... ..++.++||||||++++||++|+.||.... ........... ....++...+
T Consensus 160 ~~~~~~~~~y~~pE~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~----~~~~~~~~~~~~~~~~~~~~~~~---- 230 (260)
T cd06606 160 TGSVRGTPYWMAPEVIRG-EEYGRAADIWSLGCTVIEMATGKPPWSELG----NPMAALYKIGSSGEPPEIPEHLS---- 230 (260)
T ss_pred ccCCCCCccccCHhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCC----chHHHHHhccccCCCcCCCcccC----
Confidence 22356778999998544 568999999999999999999999997533 11111111111 1111222222
Q ss_pred hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 542 KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 542 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
..+.+++.+|++.+|++||++.|+++
T Consensus 231 ---------~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 231 ---------EEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred ---------HHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 24556778899999999999999975
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.5e-24 Score=213.25 Aligned_cols=217 Identities=17% Similarity=0.219 Sum_probs=148.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc-chhhHhHHHHHHHHHhcC-CCceeeeeEEEEeCCc-----
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQ-HPNIVRLKAFYYANDE----- 419 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~-~~~~~~f~~Ei~~l~~l~-HpnIV~l~g~~~~~~~----- 419 (584)
.+.||+|+||.||+|....++ +.||+|.++.... ....+.+.+|+.++++++ ||||+++++++...+.
T Consensus 6 ~~~lg~g~~g~vy~~~~~~~~-----~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 6 LEKIGEGTYGKVYKARDKNTG-----KLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred eeEecccCCeEEEEEEECCCC-----cEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 467999999999999987765 8999999876422 223367889999999994 6999999999987666
Q ss_pred eeEeeecccCCcHHHHHh------------------------------ccc--ccccCCCCccccc-cCeEEecCCCccc
Q 007935 420 KLLISDFIRNGSLYAALH------------------------------GFG--LNRLLPGTSKVTK-NETIVTSGTGSRI 466 (584)
Q Consensus 420 ~~lV~Ey~~~GsL~~~L~------------------------------~~g--~~~~~~~~~~i~~-~~~~~~~~~~~~~ 466 (584)
.|+||||+++ +|.+++. +.| |+++.+.|+.+.. +..++..+++...
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~ 159 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGR 159 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecccce
Confidence 8999999985 7765543 222 4556666666665 4556666665322
Q ss_pred -----------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhc-CCCCcc
Q 007935 467 -----------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE-RRPLSE 534 (584)
Q Consensus 467 -----------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~~ 534 (584)
..+++.|+|||++.....++.++|||||||++|||++|..||.+... ...... .... ..+...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~----~~~~~~-~~~~~~~~~~~ 234 (295)
T cd07837 160 AFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSE----LQQLLH-IFKLLGTPTEQ 234 (295)
T ss_pred ecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCH----HHHHHH-HHHHhCCCChh
Confidence 23567899999865545689999999999999999999999975221 111111 1110 000000
Q ss_pred cc----------------ChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 535 VI----------------DPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 535 ~~----------------d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.. ...+... ......++.+++.+||+.||.+||++.|++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 235 VWPGVSKLRDWHEFPQWKPQDLSRA--VPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred hCcchhhccchhhcCcccchhHHHh--ccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 00 0000000 0112345678999999999999999999875
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1e-24 Score=222.57 Aligned_cols=155 Identities=23% Similarity=0.347 Sum_probs=129.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcC-C-----CceeeeeEEEEeCCce
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-H-----PNIVRLKAFYYANDEK 420 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~-H-----pnIV~l~g~~~~~~~~ 420 (584)
.++||+|+||.|-||....++ +.||||+++.... ...+-..|+.+|..++ | -|+|+++++|...++.
T Consensus 191 ~e~LGkGtFGQVvk~~d~~T~-----e~VAIKIiKN~k~--f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hl 263 (586)
T KOG0667|consen 191 LEVLGKGSFGQVVKAYDHKTG-----EIVAIKIIKNKKR--FLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHL 263 (586)
T ss_pred EEEecccccceeEEEEecCCC-----cEEEEEeeccChH--HHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccce
Confidence 468999999999999999877 8999999987532 2256678999999997 4 3999999999999999
Q ss_pred eEeeecccCCcHHHHHhc-----------------------------ccccccCCCCcccccc--CeEEecCCCccc---
Q 007935 421 LLISDFIRNGSLYAALHG-----------------------------FGLNRLLPGTSKVTKN--ETIVTSGTGSRI--- 466 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~~L~~-----------------------------~g~~~~~~~~~~i~~~--~~~~~~~~~~~~--- 466 (584)
+||+|.++. +|+++|+. ..|+|++++|+.+..- ..++..|||++.
T Consensus 264 ciVfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~ 342 (586)
T KOG0667|consen 264 CIVFELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFES 342 (586)
T ss_pred eeeehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccccC
Confidence 999999976 89988863 2579999999876544 466778887653
Q ss_pred -----ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCC
Q 007935 467 -----SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAG 510 (584)
Q Consensus 467 -----~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~ 510 (584)
..-+..|.|||+++. .+|+++.||||||||+.||+||.+-|.+
T Consensus 343 q~vytYiQSRfYRAPEVILG-lpY~~~IDmWSLGCIlAEL~tG~PLfpG 390 (586)
T KOG0667|consen 343 QRVYTYIQSRFYRAPEVILG-LPYDTAIDMWSLGCILAELFTGEPLFPG 390 (586)
T ss_pred Ccceeeeeccccccchhhcc-CCCCCccceeehhhhHHhHhcCccccCC
Confidence 345778999999775 7999999999999999999999877775
|
|
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.6e-25 Score=214.76 Aligned_cols=205 Identities=20% Similarity=0.214 Sum_probs=157.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC--CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG--DATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
-++||+|+||.||-+..+.+| +.+|.|++.+. .........++|-.+|.+++.|.||.+--.|++.+..+||+
T Consensus 190 ~RvlGkGGFGEV~acqvraTG-----KMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVL 264 (591)
T KOG0986|consen 190 YRVLGKGGFGEVCACQVRATG-----KMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVL 264 (591)
T ss_pred eEEEecccccceeEEEEecch-----hhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEE
Confidence 368999999999999999987 78888888654 22222356789999999999999999999999999999999
Q ss_pred ecccCCcHH---------------------------HHHhcccc--cccCCCCccccccCeEEecCCCcc----------
Q 007935 425 DFIRNGSLY---------------------------AALHGFGL--NRLLPGTSKVTKNETIVTSGTGSR---------- 465 (584)
Q Consensus 425 Ey~~~GsL~---------------------------~~L~~~g~--~~~~~~~~~i~~~~~~~~~~~~~~---------- 465 (584)
..|.||||. ++||..++ +|++++|+.++..+++.++|.|..
T Consensus 265 tlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~~~ 344 (591)
T KOG0986|consen 265 TLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKPIR 344 (591)
T ss_pred EeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCCCCccc
Confidence 999999994 44554443 788999998888888888776632
Q ss_pred cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhh
Q 007935 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIH 545 (584)
Q Consensus 466 ~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~ 545 (584)
..+||.+|||||++.. ..|+...|.||+||++|||+.|+.||..... ...-.++-+........+++.++++.+...
T Consensus 345 ~rvGT~GYMAPEvl~n-e~Y~~s~Dwf~lGCllYemi~G~sPFr~~Ke-Kvk~eEvdrr~~~~~~ey~~kFS~eakslc- 421 (591)
T KOG0986|consen 345 GRVGTVGYMAPEVLQN-EVYDFSPDWFSLGCLLYEMIAGHSPFRQRKE-KVKREEVDRRTLEDPEEYSDKFSEEAKSLC- 421 (591)
T ss_pred cccCcccccCHHHHcC-CcccCCccHHHHHhHHHHHHcccCchhhhhh-hhhHHHHHHHHhcchhhcccccCHHHHHHH-
Confidence 2489999999999666 5799999999999999999999999974221 112223333344444445566666665433
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCCh
Q 007935 546 AKRQVLATFHIALNCTELDPEFRPRM 571 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RPt~ 571 (584)
...|++||.+|.-.
T Consensus 422 ------------~~LL~Kdp~~RLGc 435 (591)
T KOG0986|consen 422 ------------EGLLTKDPEKRLGC 435 (591)
T ss_pred ------------HHHHccCHHHhccC
Confidence 33788899988543
|
|
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.9e-24 Score=205.68 Aligned_cols=207 Identities=23% Similarity=0.385 Sum_probs=153.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc-chhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~-~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|++|.||+++....+ +.||+|.+..... ....+.+.+|++++++++|||++++++++.+.+..++|||
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (254)
T cd06627 5 GDLIGRGAFGVVYKGLNLETG-----DFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILE 79 (254)
T ss_pred eeEEcccCCeEEEEEEEcCCC-----cEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEe
Confidence 467999999999999987665 7899999987532 1345789999999999999999999999999999999999
Q ss_pred cccCCcHHHHHh-------------------------ccc--ccccCCCCccccccCeEEecCCCcc-----------cc
Q 007935 426 FIRNGSLYAALH-------------------------GFG--LNRLLPGTSKVTKNETIVTSGTGSR-----------IS 467 (584)
Q Consensus 426 y~~~GsL~~~L~-------------------------~~g--~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~ 467 (584)
|+++++|.+++. +.| |+++.+.|+.+..+...+..+++.. ..
T Consensus 80 ~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~ 159 (254)
T cd06627 80 YAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASV 159 (254)
T ss_pred cCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCccccccc
Confidence 999999976653 223 4555666666665566666665422 23
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHH
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAK 547 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 547 (584)
.++..|+|||.... ..++.++||||+|+++|||++|+.||.... ...............++..+++
T Consensus 160 ~~~~~y~~pe~~~~-~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~----~~~~~~~~~~~~~~~~~~~~~~--------- 225 (254)
T cd06627 160 VGTPYWMAPEVIEM-SGASTASDIWSLGCTVIELLTGNPPYYDLN----PMAALFRIVQDDHPPLPEGISP--------- 225 (254)
T ss_pred ccchhhcCHhhhcC-CCCCcchhHHHHHHHHHHHHhCCCCCCCcc----HHHHHHHHhccCCCCCCCCCCH---------
Confidence 56778999998544 568899999999999999999999987432 2222222222222222233333
Q ss_pred HHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 548 RQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 548 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||..+|++|||+.+++.
T Consensus 226 ----~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 226 ----ELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred ----HHHHHHHHHHhCChhhCcCHHHHhc
Confidence 3345777899999999999999874
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.8e-24 Score=210.89 Aligned_cols=208 Identities=18% Similarity=0.286 Sum_probs=150.6
Q ss_pred ceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc--chhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeecc
Q 007935 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA--TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (584)
Q Consensus 350 iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~--~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 427 (584)
||+|+||.||+++....+ +.||+|.+..... ....+.+.+|++++++++||||+++++.+.+++..++||||+
T Consensus 1 lg~g~~~~vy~~~~~~~~-----~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 75 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTG-----DIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYL 75 (265)
T ss_pred CCCCCceEEEEEEECCCC-----CEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecC
Confidence 689999999999998755 7999999976422 234578999999999999999999999999999999999999
Q ss_pred cCCcHHHHHhc-------------------------cc--ccccCCCCccccccCeEEecCCCcc---------------
Q 007935 428 RNGSLYAALHG-------------------------FG--LNRLLPGTSKVTKNETIVTSGTGSR--------------- 465 (584)
Q Consensus 428 ~~GsL~~~L~~-------------------------~g--~~~~~~~~~~i~~~~~~~~~~~~~~--------------- 465 (584)
++|+|.+++++ .| |+++.+.|+.+..++.++..+++..
T Consensus 76 ~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 155 (265)
T cd05579 76 PGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDE 155 (265)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccc
Confidence 99999766643 23 4555556666666666666555421
Q ss_pred ----cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhh
Q 007935 466 ----ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALV 541 (584)
Q Consensus 466 ----~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~ 541 (584)
...++..|+|||.... ..++.++||||||+++||+++|+.||.... ...............+....
T Consensus 156 ~~~~~~~~~~~~~~Pe~~~~-~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~---- 225 (265)
T cd05579 156 KEDKRIVGTPDYIAPEVILG-QGHSKTVDWWSLGCILYEFLVGIPPFHGET-----PEEIFQNILNGKIEWPEDVE---- 225 (265)
T ss_pred ccccCcccCccccCHHHhcC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHhcCCcCCCcccc----
Confidence 1246678999998554 568899999999999999999999997432 22233332222222121110
Q ss_pred hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHH
Q 007935 542 KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579 (584)
Q Consensus 542 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~ 579 (584)
....+.+++.+||+.+|++|||+.++.+.|+
T Consensus 226 -------~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 226 -------VSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred -------CCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 0124456778899999999999966555543
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.5e-24 Score=212.52 Aligned_cols=206 Identities=20% Similarity=0.305 Sum_probs=149.2
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCC--CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG--DATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
+.||+|+||.||+|+...++ ..||+|.+... ......+++.+|++++++++|+|++++++++...+..++|||
T Consensus 21 ~~lg~g~~g~v~~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 95 (308)
T cd06634 21 REIGHGSFGAVYFARDVRNS-----EVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 95 (308)
T ss_pred HheeeCCCEEEEEEEEcCCC-----cEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence 56999999999999987665 78999998643 222334678899999999999999999999999999999999
Q ss_pred cccCCcHHHHH--------------------------hccc--ccccCCCCccccccCeEEecCCCccc-------ccCC
Q 007935 426 FIRNGSLYAAL--------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSRI-------SAIS 470 (584)
Q Consensus 426 y~~~GsL~~~L--------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~-------~~gt 470 (584)
|+. |++.+++ |..| |+++.+.|+.+..++..+..+++... ..++
T Consensus 96 ~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 174 (308)
T cd06634 96 YCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGT 174 (308)
T ss_pred ccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecCcccccCC
Confidence 997 5765443 3333 46666677666666667777766332 3578
Q ss_pred CcccCccccc--cCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC--CccccChhhhhhhhH
Q 007935 471 NVYLAPEARI--YGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP--LSEVIDPALVKEIHA 546 (584)
Q Consensus 471 ~~y~aPE~~~--~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~d~~~~~~~~~ 546 (584)
..|+|||++. ....++.++|||||||++|||++|+.||..... ............+ ....++
T Consensus 175 ~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~--------- 240 (308)
T cd06634 175 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-----MSALYHIAQNESPALQSGHWS--------- 240 (308)
T ss_pred ccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccH-----HHHHHHHhhcCCCCcCccccc---------
Confidence 8899999853 224678899999999999999999999864211 1111111111111 011122
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCChHHHHHH
Q 007935 547 KRQVLATFHIALNCTELDPEFRPRMRTVSES 577 (584)
Q Consensus 547 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 577 (584)
..+.+++.+||+.+|++||++.+++..
T Consensus 241 ----~~~~~li~~cl~~~P~~Rp~~~~ll~~ 267 (308)
T cd06634 241 ----EYFRNFVDSCLQKIPQDRPTSEVLLKH 267 (308)
T ss_pred ----HHHHHHHHHHhhCCcccCCCHHHHhhC
Confidence 234567888999999999999999864
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.9e-24 Score=216.91 Aligned_cols=222 Identities=19% Similarity=0.258 Sum_probs=150.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCC------c
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYAND------E 419 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~------~ 419 (584)
.+.||+|+||.||+|.....+ +.||||++.... .....+.+.+|++++++++||||+++++++.... .
T Consensus 20 ~~~ig~g~~g~v~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 94 (342)
T cd07879 20 LKQVGSGAYGSVCSAIDKRTG-----EKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQD 94 (342)
T ss_pred EEEeeecCCeEEEEEEeCCCC-----cEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCce
Confidence 468999999999999986654 799999987642 2222356889999999999999999999987643 4
Q ss_pred eeEeeecccCCcHH-----------------------HHHhccc--ccccCCCCccccccCeEEecCCCccc--------
Q 007935 420 KLLISDFIRNGSLY-----------------------AALHGFG--LNRLLPGTSKVTKNETIVTSGTGSRI-------- 466 (584)
Q Consensus 420 ~~lV~Ey~~~GsL~-----------------------~~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~-------- 466 (584)
.++|+||+.. +|. .+||+.| |+++.+.|+.+..+..++..+++...
T Consensus 95 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~~~~ 173 (342)
T cd07879 95 FYLVMPYMQT-DLQKIMGHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADAEMTG 173 (342)
T ss_pred EEEEeccccc-CHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCCCCCC
Confidence 6899999964 553 3445444 46666677666666666766665332
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhc-CCCCcc-----------
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE-RRPLSE----------- 534 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~~----------- 534 (584)
..++..|+|||++..+..++.++|||||||++|||++|+.||.+... ...+...... ..+.+.
T Consensus 174 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (342)
T cd07879 174 YVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY-----LDQLTQILKVTGVPGPEFVQKLEDKAAK 248 (342)
T ss_pred ceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHhcCCCCHHHHHHhcccchH
Confidence 24677899999865545689999999999999999999999975221 1111111110 000000
Q ss_pred --------ccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHH--HHhh
Q 007935 535 --------VIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSES--LDRV 581 (584)
Q Consensus 535 --------~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~--L~~i 581 (584)
.....+.... ......+.+++.+||+.||++||+++|++.. ++.+
T Consensus 249 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~ 303 (342)
T cd07879 249 SYIKSLPKYPRKDFSTLF--PKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSF 303 (342)
T ss_pred HHHhhcCCcccchHHHHh--cCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhc
Confidence 0000000000 0012346789999999999999999999843 4444
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.1e-25 Score=210.98 Aligned_cols=199 Identities=19% Similarity=0.284 Sum_probs=152.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC--CcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG--DATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLI 423 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV 423 (584)
-.+||+|+||.|..+..+.+. ..+|||++++. ...+..+--+.|-++|+-- +-|.+|+++.++++-+..|+|
T Consensus 354 l~VlGKGSFGKVlLaerkgtd-----ELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 354 LMVLGKGSFGKVLLAERKGTD-----ELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred EEEeccCccceeeeecccCcc-----hhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 468999999999999887776 78999999886 2222334456777888776 679999999999999999999
Q ss_pred eecccCCcHHHHHhc-------------------------ccc--cccCCCCccccccCeEEecCCC-----------cc
Q 007935 424 SDFIRNGSLYAALHG-------------------------FGL--NRLLPGTSKVTKNETIVTSGTG-----------SR 465 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~~-------------------------~g~--~~~~~~~~~i~~~~~~~~~~~~-----------~~ 465 (584)
|||+.||+|.-+++. .|+ ++++.+|+.+..++++++.++| ++
T Consensus 429 MEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~TTk 508 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGVTTK 508 (683)
T ss_pred EEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccccccCCccee
Confidence 999999999666543 343 6677778777777888887776 34
Q ss_pred cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhh
Q 007935 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIH 545 (584)
Q Consensus 466 ~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~ 545 (584)
..+||+.|+|||++.. +.|+..+|.|||||+||||+.|++||++.+ -.++.+.+.......+..++.+..
T Consensus 509 TFCGTPdYiAPEIi~Y-qPYgksvDWWa~GVLLyEmlaGQpPFdGeD-----E~elF~aI~ehnvsyPKslSkEAv---- 578 (683)
T KOG0696|consen 509 TFCGTPDYIAPEIIAY-QPYGKSVDWWAFGVLLYEMLAGQPPFDGED-----EDELFQAIMEHNVSYPKSLSKEAV---- 578 (683)
T ss_pred eecCCCcccccceEEe-cccccchhHHHHHHHHHHHHcCCCCCCCCC-----HHHHHHHHHHccCcCcccccHHHH----
Confidence 4689999999999766 799999999999999999999999998643 234455555444444555554443
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCC
Q 007935 546 AKRQVLATFHIALNCTELDPEFRP 569 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RP 569 (584)
.+...-+.+.|.+|.
T Consensus 579 ---------~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 579 ---------AICKGLLTKHPGKRL 593 (683)
T ss_pred ---------HHHHHHhhcCCcccc
Confidence 344446777888873
|
|
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.8e-24 Score=215.32 Aligned_cols=218 Identities=20% Similarity=0.296 Sum_probs=149.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC-CcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCC--ceeE
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARV-QHPNIVRLKAFYYAND--EKLL 422 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~--~~~l 422 (584)
.+.||+|+||.||+|....++ ..||||++... ......+.+.+|+.+++++ +||||++++++|...+ ..++
T Consensus 12 ~~~lg~g~~~~v~~~~~~~~~-----~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~l 86 (337)
T cd07852 12 LQKLGKGAYGIVWKAIDRRTK-----EVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYL 86 (337)
T ss_pred hHhhcCCCCeeEEEEEEcCCC-----eEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEE
Confidence 356999999999999987655 79999998653 2222336688999999999 9999999999987543 5899
Q ss_pred eeecccCCcHHHHH------------------------hccc--ccccCCCCccccccCeEEecCCCccc----------
Q 007935 423 ISDFIRNGSLYAAL------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 423 V~Ey~~~GsL~~~L------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
||||++ ++|.+++ |+.| |+++.+.|+.+..+..++..++|...
T Consensus 87 v~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~~ 165 (337)
T cd07852 87 VFEYME-TDLHAVIRANILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPE 165 (337)
T ss_pred Eecccc-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhcccccccccc
Confidence 999997 4775544 4434 46667777767666666666654221
Q ss_pred ------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhc-CCCCcc-----
Q 007935 467 ------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE-RRPLSE----- 534 (584)
Q Consensus 467 ------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~~----- 534 (584)
..|+..|+|||++.....++.++|||||||++|||+||+.||...... .. ....... ..+..+
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~----~~-~~~~~~~~~~~~~~~~~~~ 240 (337)
T cd07852 166 NPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTL----NQ-LEKIIEVIGPPSAEDIESI 240 (337)
T ss_pred CcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChH----HH-HHHHHHHhCCCCHHHHHHH
Confidence 246778999998665556889999999999999999999999653221 11 1111000 000000
Q ss_pred -------cc-------ChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHH
Q 007935 535 -------VI-------DPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSES 577 (584)
Q Consensus 535 -------~~-------d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 577 (584)
.+ ........ ......+.+++.+||+.||++|||+.++++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 241 KSPFAATMLDSLPSRPRKPLDELL--PKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HhhhHHHhhhhcccccccchhhhc--cCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 00 00000000 0013456789999999999999999999863
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.3e-24 Score=216.87 Aligned_cols=157 Identities=22% Similarity=0.339 Sum_probs=124.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC-CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC------Cc
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN------DE 419 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~------~~ 419 (584)
.+.||+|+||.||+|.....+ +.||||.+... ......+.+.+|++++++++||||+++++++... ..
T Consensus 21 ~~~lg~g~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 95 (353)
T cd07850 21 LKPIGSGAQGIVCAAYDTVTG-----QNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQD 95 (353)
T ss_pred EEEeccCCCEEEEEEEECCCC-----CEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCc
Confidence 367999999999999987765 79999998754 2223346788999999999999999999998654 34
Q ss_pred eeEeeecccCCcHHHH-----------------------Hhccc--ccccCCCCccccccCeEEecCCCccc--------
Q 007935 420 KLLISDFIRNGSLYAA-----------------------LHGFG--LNRLLPGTSKVTKNETIVTSGTGSRI-------- 466 (584)
Q Consensus 420 ~~lV~Ey~~~GsL~~~-----------------------L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~-------- 466 (584)
.++||||+.+ +|.++ ||..| |+++.+.|+.+..++.++..++|...
T Consensus 96 ~~lv~e~~~~-~l~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~ 174 (353)
T cd07850 96 VYLVMELMDA-NLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 174 (353)
T ss_pred EEEEEeccCC-CHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCCCCCCC
Confidence 7999999965 66443 44444 57777777777777777777776432
Q ss_pred --ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCC
Q 007935 467 --SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAG 510 (584)
Q Consensus 467 --~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~ 510 (584)
..++..|+|||.+. +..++.++|||||||++|||++|+.||..
T Consensus 175 ~~~~~~~~y~aPE~~~-~~~~~~~~DvwslG~~l~~l~~g~~pf~~ 219 (353)
T cd07850 175 TPYVVTRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMIRGTVLFPG 219 (353)
T ss_pred CCCcccccccCHHHHh-CCCCCCchhhHhHHHHHHHHHHCCCCCCC
Confidence 24677899999854 46899999999999999999999999975
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=6e-24 Score=211.57 Aligned_cols=218 Identities=20% Similarity=0.286 Sum_probs=153.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC---cchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeE
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD---ATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLL 422 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~---~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~l 422 (584)
.+.||+|++|.||+++...... ....||||.++... .....+.+.+|++++.++ +||||+++++.+..++..++
T Consensus 5 ~~~ig~G~~~~vy~~~~~~~~~--~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~l 82 (288)
T cd05583 5 LRVLGTGAYGKVFLVRKVGGHD--AGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHL 82 (288)
T ss_pred EEEeccCCCceEEEEEEecccc--CCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEEE
Confidence 4679999999999998653211 12689999987542 122336788999999999 69999999999999999999
Q ss_pred eeecccCCcHHHHHh-------------------------ccc--ccccCCCCccccccCeEEecCCCcc----------
Q 007935 423 ISDFIRNGSLYAALH-------------------------GFG--LNRLLPGTSKVTKNETIVTSGTGSR---------- 465 (584)
Q Consensus 423 V~Ey~~~GsL~~~L~-------------------------~~g--~~~~~~~~~~i~~~~~~~~~~~~~~---------- 465 (584)
||||+++|+|.+++. +.| |.++.+.|+.+..+...+..+++..
T Consensus 83 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 162 (288)
T cd05583 83 ILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEER 162 (288)
T ss_pred EEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECccccccccccccc
Confidence 999999999976654 222 4555556665655555666565422
Q ss_pred --cccCCCcccCccccccCC-CCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhh
Q 007935 466 --ISAISNVYLAPEARIYGS-KFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVK 542 (584)
Q Consensus 466 --~~~gt~~y~aPE~~~~~~-~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~ 542 (584)
...|+..|+|||...... ..+.++||||||+++|||+||+.||..... ......+.........+.+..+++.+
T Consensus 163 ~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l-- 239 (288)
T cd05583 163 AYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGE-QNSQSEISRRILKSKPPFPKTMSAEA-- 239 (288)
T ss_pred cccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcc-cchHHHHHHHHHccCCCCCcccCHHH--
Confidence 124788899999854422 268899999999999999999999864221 11223333333333333333344333
Q ss_pred hhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHh
Q 007935 543 EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580 (584)
Q Consensus 543 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 580 (584)
.+++.+||+.||++|||+.++.+.|+.
T Consensus 240 -----------~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 240 -----------RDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred -----------HHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 456777999999999999888776654
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=99.91 E-value=6e-24 Score=212.43 Aligned_cols=211 Identities=20% Similarity=0.314 Sum_probs=150.0
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcC-CCceeeeeEEEEeCCceeEee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-HPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~-HpnIV~l~g~~~~~~~~~lV~ 424 (584)
..+.||+|+||.||+|.....+ +.||||.++........+++.+|+.++.+.+ ||||++++++|.+....++||
T Consensus 19 ~~~~lg~g~~~~v~~~~~~~~~-----~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~ 93 (296)
T cd06618 19 NLGEIGSGTCGQVYKMRFKKTG-----HVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM 93 (296)
T ss_pred eeeEeeccCCeEEEEEEECCCC-----eEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence 3568999999999999998754 8999999986543334467888888887775 999999999999999999999
Q ss_pred ecccCCcHH--------------------------HHHhc-cc--ccccCCCCccccccCeEEecCCCccc---------
Q 007935 425 DFIRNGSLY--------------------------AALHG-FG--LNRLLPGTSKVTKNETIVTSGTGSRI--------- 466 (584)
Q Consensus 425 Ey~~~GsL~--------------------------~~L~~-~g--~~~~~~~~~~i~~~~~~~~~~~~~~~--------- 466 (584)
||+++ ++. .|||. .| |+++.+.|+.+..+...+..++|...
T Consensus 94 e~~~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~~~ 172 (296)
T cd06618 94 ELMST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAKT 172 (296)
T ss_pred eccCc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccCCCccc
Confidence 99864 432 34553 23 56666667666666667777765332
Q ss_pred -ccCCCcccCccccccC---CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC-CccccChhhh
Q 007935 467 -SAISNVYLAPEARIYG---SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP-LSEVIDPALV 541 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~---~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~d~~~~ 541 (584)
..++..|+|||++... ..++.++||||||+++|||++|+.||.....+ .+..........+ .+.. .
T Consensus 173 ~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~---~-- 243 (296)
T cd06618 173 RSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE----FEVLTKILQEEPPSLPPN---E-- 243 (296)
T ss_pred CCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH----HHHHHHHhcCCCCCCCCC---C--
Confidence 2366789999986432 23789999999999999999999999642211 1222222222111 1110 0
Q ss_pred hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHH
Q 007935 542 KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSES 577 (584)
Q Consensus 542 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 577 (584)
....++.+++.+||+.||++||++.++++.
T Consensus 244 ------~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 244 ------GFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred ------CCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 011245678888999999999999999753
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.2e-24 Score=217.31 Aligned_cols=220 Identities=18% Similarity=0.243 Sum_probs=150.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEe----CCcee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYA----NDEKL 421 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~----~~~~~ 421 (584)
.+.||+|+||.||+|.....+ ..||+|++.... .....+.+.+|+.++++++||||+++++++.. ....+
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~-----~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (334)
T cd07855 10 IENIGSGAYGVVCSAIDTRSG-----KKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY 84 (334)
T ss_pred eeeeecCCCeEEEEEEEcCCC-----CEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence 357999999999999988765 799999997642 22334678899999999999999999998864 34689
Q ss_pred EeeecccCCcHHHHH-------------------------hccc--ccccCCCCccccccCeEEecCCCcc---------
Q 007935 422 LISDFIRNGSLYAAL-------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSR--------- 465 (584)
Q Consensus 422 lV~Ey~~~GsL~~~L-------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~--------- 465 (584)
+||||+. |+|.+++ |+.| |+++.+.|+.+..++.++..+++..
T Consensus 85 lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 163 (334)
T cd07855 85 VVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTE 163 (334)
T ss_pred EEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecccCcC
Confidence 9999996 5776555 3333 4566666766666666666666532
Q ss_pred ------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCcccc---
Q 007935 466 ------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVI--- 536 (584)
Q Consensus 466 ------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--- 536 (584)
...|+..|+|||++.....++.++|||||||++|||++|+.||.+.... ............ +.....
T Consensus 164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~--~~~~~~~~~~g~--~~~~~~~~~ 239 (334)
T cd07855 164 HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYV--HQLKLILSVLGS--PSEEVLNRI 239 (334)
T ss_pred CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChH--HHHHHHHHHhCC--ChhHhhhhh
Confidence 1257788999998655456899999999999999999999999753221 011111111000 000000
Q ss_pred -Chhhhhhh-------------hHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 537 -DPALVKEI-------------HAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 537 -d~~~~~~~-------------~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+..+.... ........+.+++.+||+.+|++|||+.+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 293 (334)
T cd07855 240 GSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ 293 (334)
T ss_pred chhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 00000000 00012346778999999999999999999885
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-23 Score=211.26 Aligned_cols=220 Identities=18% Similarity=0.201 Sum_probs=147.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc-chhhHhHHHHHHHHHhcCCCceeeeeEEEEeCC-------
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPNIVRLKAFYYAND------- 418 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~-~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~------- 418 (584)
.+.||+|+||.||+|....++ +.||+|+++.... ......+.+|++++++++||||+++++++.+..
T Consensus 12 ~~~lg~g~~g~v~~~~~~~~~-----~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~ 86 (302)
T cd07864 12 IGQIGEGTYGQVYKARDKDTG-----ELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKK 86 (302)
T ss_pred eeeecccCCEEEEEEEECCCC-----cEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccc
Confidence 467999999999999998765 7899999976422 222356789999999999999999999997755
Q ss_pred ---ceeEeeecccCCcHHH--------------------------HHhccc--ccccCCCCccccccCeEEecCCCccc-
Q 007935 419 ---EKLLISDFIRNGSLYA--------------------------ALHGFG--LNRLLPGTSKVTKNETIVTSGTGSRI- 466 (584)
Q Consensus 419 ---~~~lV~Ey~~~GsL~~--------------------------~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~- 466 (584)
..++|+||+++ ++.+ +||+.| |+++.+.++.+..+..++..+++...
T Consensus 87 ~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~ 165 (302)
T cd07864 87 DKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLARL 165 (302)
T ss_pred cCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCccccccc
Confidence 78999999986 5533 334444 35555566556555666666665322
Q ss_pred -----------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC--Cc
Q 007935 467 -----------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP--LS 533 (584)
Q Consensus 467 -----------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~--~~ 533 (584)
..++..|+|||.+.....++.++|||||||++|||++|+.||..... ...+.. +........+ .+
T Consensus 166 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~ 243 (302)
T cd07864 166 YNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQE-LAQLEL-ISRLCGSPCPAVWP 243 (302)
T ss_pred ccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh-HHHHHH-HHHHhCCCChhhcc
Confidence 13466799999865545678999999999999999999999974221 111111 1111111100 00
Q ss_pred cc--------cC------hhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 534 EV--------ID------PALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 534 ~~--------~d------~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.. .+ ....... ......+.+++.+||+.+|.+||++.+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 244 DVIKLPYFNTMKPKKQYRRRLREEF--SFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred cccccccccccccccccccchhhhc--CCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 00 00 0000000 001245778999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.9e-24 Score=218.81 Aligned_cols=227 Identities=16% Similarity=0.217 Sum_probs=152.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC-CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC-----Cce
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN-----DEK 420 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~-----~~~ 420 (584)
.+.||+|+||.||+|+...++ +.||||.++.. ......+.+.+|+.++++++||||+++++++... ...
T Consensus 10 ~~~lg~G~~~~vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 84 (337)
T cd07858 10 IKPIGRGAYGIVCSAKNSETN-----EKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDV 84 (337)
T ss_pred EEEeccCCCeEEEEEEecCCC-----CeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcE
Confidence 357999999999999987665 89999998754 2222336788999999999999999999988754 347
Q ss_pred eEeeecccCCcHHHHH-------------------------hccc--ccccCCCCccccccCeEEecCCCccc-------
Q 007935 421 LLISDFIRNGSLYAAL-------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSRI------- 466 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~~L-------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~------- 466 (584)
++||||+. ++|.+++ |..+ |+++.+.|+.+..+..++..+++...
T Consensus 85 ~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~ 163 (337)
T cd07858 85 YIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGD 163 (337)
T ss_pred EEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCCCcc
Confidence 99999996 5775544 3333 46666667666666666666665321
Q ss_pred ----ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC--CCccccChhh
Q 007935 467 ----SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR--PLSEVIDPAL 540 (584)
Q Consensus 467 ----~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~d~~~ 540 (584)
..++..|+|||.+..+..++.++|||||||++|||++|+.||.+.... .............. ......++..
T Consensus 164 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (337)
T cd07858 164 FMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYV--HQLKLITELLGSPSEEDLGFIRNEKA 241 (337)
T ss_pred cccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChH--HHHHHHHHHhCCCChHHhhhcCchhh
Confidence 246778999998655456899999999999999999999999753211 01111111100000 0000000000
Q ss_pred hhh-------------hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHH--HHhh
Q 007935 541 VKE-------------IHAKRQVLATFHIALNCTELDPEFRPRMRTVSES--LDRV 581 (584)
Q Consensus 541 ~~~-------------~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~--L~~i 581 (584)
... ........++.+++.+||+.+|++|||++|+++. ++.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~ 297 (337)
T cd07858 242 RRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL 297 (337)
T ss_pred hHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence 000 0001123456789999999999999999999864 4443
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.2e-23 Score=211.66 Aligned_cols=222 Identities=18% Similarity=0.210 Sum_probs=147.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc-chhhHhHHHHHHHHHhcCCCceeeeeEEEEeC--CceeEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPNIVRLKAFYYAN--DEKLLI 423 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~-~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~--~~~~lV 423 (584)
.+.||+|+||.||+|.....+ ..||+|.++.... ......+.+|+.++++++|+||+++++++.+. +..++|
T Consensus 12 ~~~ig~g~~~~v~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (309)
T cd07845 12 LNRIGEGTYGIVYRARDTTSG-----EIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLV 86 (309)
T ss_pred eeeeeecCCEEEEEEEECCCC-----cEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEE
Confidence 457999999999999987765 7899999875422 22224567899999999999999999998765 468999
Q ss_pred eecccCCcHHHHH--------------------------hccc--ccccCCCCccccccCeEEecCCCccc---------
Q 007935 424 SDFIRNGSLYAAL--------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSRI--------- 466 (584)
Q Consensus 424 ~Ey~~~GsL~~~L--------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~--------- 466 (584)
|||+++ +|.+++ |+.| |+++.++|+.+..++.++..+++...
T Consensus 87 ~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~ 165 (309)
T cd07845 87 MEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPM 165 (309)
T ss_pred EecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCccCCC
Confidence 999975 664443 4334 45666666666666666666665322
Q ss_pred --ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC-CCc---------c
Q 007935 467 --SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR-PLS---------E 534 (584)
Q Consensus 467 --~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~---------~ 534 (584)
..++..|+|||++.....++.++||||+||++|||++|+.||...... .....+........ ... .
T Consensus 166 ~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (309)
T cd07845 166 TPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEI--EQLDLIIQLLGTPNESIWPGFSDLPLVG 243 (309)
T ss_pred CcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHhcCCCChhhchhhhcccccc
Confidence 134667999998655456899999999999999999999999753221 11111111110000 000 0
Q ss_pred cc--ChhhhhhhhH--HHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 535 VI--DPALVKEIHA--KRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 535 ~~--d~~~~~~~~~--~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+ .......... ......+.+++.+|++.||++|||+.|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~ 289 (309)
T cd07845 244 KFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE 289 (309)
T ss_pred cccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 00 0000000000 011345567999999999999999999985
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-23 Score=205.59 Aligned_cols=206 Identities=21% Similarity=0.323 Sum_probs=152.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||+++....+ ..+|+|.+.... ......++.+|++++++++||||+++++++.+.+..++|||
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (256)
T cd08530 5 LKKLGKGSYGSVYKVKRLSDN-----QFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVME 79 (256)
T ss_pred eeeecCCCceeEEEEEECCCC-----CEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEeh
Confidence 457999999999999877655 789999987642 23334678899999999999999999999999999999999
Q ss_pred cccCCcHHHHHhc-----------------------------cc--ccccCCCCccccccCeEEecCCCcc---------
Q 007935 426 FIRNGSLYAALHG-----------------------------FG--LNRLLPGTSKVTKNETIVTSGTGSR--------- 465 (584)
Q Consensus 426 y~~~GsL~~~L~~-----------------------------~g--~~~~~~~~~~i~~~~~~~~~~~~~~--------- 465 (584)
|+++++|.+++.. .| |.++.+.|+.+..+...+..+++..
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~ 159 (256)
T cd08530 80 YAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAK 159 (256)
T ss_pred hcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccCCcc
Confidence 9999999777643 22 4555556665555555555555422
Q ss_pred cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC-CCccccChhhhhhh
Q 007935 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR-PLSEVIDPALVKEI 544 (584)
Q Consensus 466 ~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~d~~~~~~~ 544 (584)
...++..|++||.+. +..++.++|+||||+++|||++|+.||.... ............. +.....
T Consensus 160 ~~~~~~~~~~Pe~~~-~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~-------- 225 (256)
T cd08530 160 TQIGTPHYMAPEVWK-GRPYSYKSDIWSLGCLLYEMATFAPPFEARS-----MQDLRYKVQRGKYPPIPPIY-------- 225 (256)
T ss_pred cccCCccccCHHHHC-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHhcCCCCCCchhh--------
Confidence 235788899999954 4678999999999999999999999997532 2222222222111 111111
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
...+.+++.+|++.+|++||++.|+++
T Consensus 226 -----~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 226 -----SQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred -----CHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 124566888899999999999999975
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.4e-23 Score=201.44 Aligned_cols=208 Identities=21% Similarity=0.294 Sum_probs=151.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|++|.||++.....+ ..|++|++..... ...+.+.+|++++++++||||+++++++...+..++++||
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~-----~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~ 78 (253)
T cd05122 5 LEKIGKGGFGEVYKARHKRTG-----KEVAIKVIKLESK-EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEF 78 (253)
T ss_pred eeeeccCCceEEEEEEECCCC-----cEEEEEEecccch-hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEec
Confidence 357999999999999987654 7899999987533 3447899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcc----------------------------cccccCCCCccccccCeEEecCCCcc----------ccc
Q 007935 427 IRNGSLYAALHGF----------------------------GLNRLLPGTSKVTKNETIVTSGTGSR----------ISA 468 (584)
Q Consensus 427 ~~~GsL~~~L~~~----------------------------g~~~~~~~~~~i~~~~~~~~~~~~~~----------~~~ 468 (584)
+++++|.+++... .|.++.+.|+.+..+..++..+++.. ...
T Consensus 79 ~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~ 158 (253)
T cd05122 79 CSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMV 158 (253)
T ss_pred CCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeecccccccccccccccee
Confidence 9999997766432 24555556666665565666555422 234
Q ss_pred CCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHH
Q 007935 469 ISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKR 548 (584)
Q Consensus 469 gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 548 (584)
++..|++||++.. ..++.++||||||+++|||++|+.||..... ..... ....... ....++..
T Consensus 159 ~~~~~~~PE~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~~~-~~~~~~~--~~~~~~~~-------- 222 (253)
T cd05122 159 GTPYWMAPEVING-KPYDYKADIWSLGITAIELAEGKPPYSELPP----MKALF-KIATNGP--PGLRNPEK-------- 222 (253)
T ss_pred cCCcccCHHHHcC-CCCCccccHHHHHHHHHHHHhCCCCCCCCch----HHHHH-HHHhcCC--CCcCcccc--------
Confidence 6778999998554 5689999999999999999999999874221 11111 1111111 11111110
Q ss_pred HHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 549 QVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 549 ~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
....+.+++.+||+.||++|||+.|+++
T Consensus 223 ~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 223 WSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred cCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0124566788899999999999999875
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.8e-23 Score=211.84 Aligned_cols=223 Identities=16% Similarity=0.231 Sum_probs=149.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC-CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEe-CCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARVQHPNIVRLKAFYYA-NDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~-~~~~~lV~ 424 (584)
.+.||+|+||.||++.....+ +.||||++... ......+.+.+|++++++++|||||++++++.. .+..++||
T Consensus 15 ~~~ig~g~~g~v~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~ 89 (328)
T cd07856 15 LQPVGMGAFGLVCSARDQLTG-----QNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVT 89 (328)
T ss_pred EEeecccCCeEEEEEEECCCC-----CEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEe
Confidence 467999999999999987665 89999998654 222234678899999999999999999999876 55789999
Q ss_pred ecccCCcHHHHH------------------------hccc--ccccCCCCccccccCeEEecCCCccc--------ccCC
Q 007935 425 DFIRNGSLYAAL------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSRI--------SAIS 470 (584)
Q Consensus 425 Ey~~~GsL~~~L------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~--------~~gt 470 (584)
||+. ++|.+++ |..| |+++.+.|..+..+...+..+++... ..++
T Consensus 90 e~~~-~~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 168 (328)
T cd07856 90 ELLG-TDLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQMTGYVST 168 (328)
T ss_pred ehhc-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCCCcCCCccc
Confidence 9984 5775554 3333 45666666666666666666665322 3467
Q ss_pred CcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC-C-CccccChhhhhh-----
Q 007935 471 NVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR-P-LSEVIDPALVKE----- 543 (584)
Q Consensus 471 ~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~-~-~~~~~d~~~~~~----- 543 (584)
..|+|||++..+..++.++|||||||++|||+||+.||...... .............. . .....+......
T Consensus 169 ~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (328)
T cd07856 169 RYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHV--NQFSIITDLLGTPPDDVINTICSENTLRFVQSLP 246 (328)
T ss_pred ccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCCHHHHHhccchhhHHHHhhcc
Confidence 78999998655467899999999999999999999999653211 00000111000000 0 000000000000
Q ss_pred ------hh--HHHHHHHHHHHHhcccCCCCCCCCChHHHHHH
Q 007935 544 ------IH--AKRQVLATFHIALNCTELDPEFRPRMRTVSES 577 (584)
Q Consensus 544 ------~~--~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 577 (584)
.. .......+.+++.+||+.+|++|||+.+++..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 247 KREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred ccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00 00012466788999999999999999999753
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.3e-24 Score=212.58 Aligned_cols=220 Identities=16% Similarity=0.191 Sum_probs=146.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc-chhhHhHHHHHHHHHhcCCCceeeeeEEEEeCC-------
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPNIVRLKAFYYAND------- 418 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~-~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~------- 418 (584)
.+.||+|+||.||+|.....+ +.||||++..... ......+.+|++++++++||||+++++++.+..
T Consensus 13 ~~~lg~g~~~~v~~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 87 (311)
T cd07866 13 LGKLGEGTFGEVYKARQIKTG-----RVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKR 87 (311)
T ss_pred EEEeccCCCEEEEEEEECCCC-----cEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccccC
Confidence 357999999999999987665 7899999865422 222356789999999999999999999886543
Q ss_pred -ceeEeeecccCCcHH--------------------------HHHhccc--ccccCCCCccccccCeEEecCCCccc---
Q 007935 419 -EKLLISDFIRNGSLY--------------------------AALHGFG--LNRLLPGTSKVTKNETIVTSGTGSRI--- 466 (584)
Q Consensus 419 -~~~lV~Ey~~~GsL~--------------------------~~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~--- 466 (584)
..++||||+.+ +|. .|||+.| |+++.+.|+.+..+...+..+++...
T Consensus 88 ~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 166 (311)
T cd07866 88 GSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARPYD 166 (311)
T ss_pred ceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccchhcc
Confidence 46999999975 453 3445444 45566666666555555555554221
Q ss_pred -------------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhh
Q 007935 467 -------------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 527 (584)
Q Consensus 467 -------------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~ 527 (584)
..++..|+|||++..+..++.++|||||||++|||++|++||.+.... .....+.. ...
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~-~~~~~~~~-~~~ 244 (311)
T cd07866 167 GPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDI-DQLHLIFK-LCG 244 (311)
T ss_pred CCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHH-HhC
Confidence 134677999998655456899999999999999999999999753221 11111111 100
Q ss_pred cCC----------------CCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 528 ERR----------------PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 528 ~~~----------------~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
... .......+.+.... ......+.+++.+|++.||++|||+.|++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 245 TPTEETWPGWRSLPGCEGVHSFTNYPRTLEERF--GKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred CCChhhchhhhhcccccccccCCCCCccHHHHc--ccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 000 00000111111100 011246778999999999999999999874
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.7e-23 Score=203.56 Aligned_cols=200 Identities=21% Similarity=0.320 Sum_probs=149.9
Q ss_pred ceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc--chhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeecc
Q 007935 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA--TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (584)
Q Consensus 350 iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~--~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 427 (584)
||+|+||.||++.....+ +.||+|.+..... ....+.+.+|++++++++||||+++++.+..++..++||||+
T Consensus 1 lg~G~~~~v~~~~~~~~~-----~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 75 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTG-----KLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYA 75 (250)
T ss_pred CCCCCceEEEEEEECCCC-----cEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecC
Confidence 689999999999987654 7999999876522 223468999999999999999999999999999999999999
Q ss_pred cCCcHHHHHhc-------------------------c--cccccCCCCccccccCeEEecCCCcc-----------cccC
Q 007935 428 RNGSLYAALHG-------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSR-----------ISAI 469 (584)
Q Consensus 428 ~~GsL~~~L~~-------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~~g 469 (584)
++++|.+++.. . .|.++.+.|+.+..++.++..+++.. ...+
T Consensus 76 ~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~ 155 (250)
T cd05123 76 PGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCG 155 (250)
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcC
Confidence 99999877643 2 24556666666666666666555432 2356
Q ss_pred CCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHHH
Q 007935 470 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQ 549 (584)
Q Consensus 470 t~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 549 (584)
+..|++||.... ...+.++||||||+++||+++|+.||...+. ............+++...+.
T Consensus 156 ~~~~~~Pe~~~~-~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~----------- 218 (250)
T cd05123 156 TPEYLAPEVLLG-KGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR-----KEIYEKILKDPLRFPEFLSP----------- 218 (250)
T ss_pred CccccChHHhCC-CCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHhcCCCCCCCCCCH-----------
Confidence 778999998544 5688999999999999999999999964321 33333333333333333333
Q ss_pred HHHHHHHHhcccCCCCCCCCChHH
Q 007935 550 VLATFHIALNCTELDPEFRPRMRT 573 (584)
Q Consensus 550 ~~~~~~l~~~Cl~~~P~~RPt~~e 573 (584)
.+.+++.+||..||++||++.+
T Consensus 219 --~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 219 --EARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred --HHHHHHHHHhcCCHhhCCCccc
Confidence 3345777799999999999954
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.4e-23 Score=203.42 Aligned_cols=206 Identities=15% Similarity=0.216 Sum_probs=146.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC----CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC--Cce
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG----DATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN--DEK 420 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~----~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~--~~~ 420 (584)
.+.||+|+||.||+|.....+ ..||+|.+... ......+.|.+|++++++++||||+++++++.+. +..
T Consensus 7 ~~~lg~g~~g~v~~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 7 GKLLGRGAFGEVYLCYDADTG-----RELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred eeeEccCCCeEEEEEEEcCCC-----CEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 567999999999999987655 79999987532 1223346889999999999999999999998764 457
Q ss_pred eEeeecccCCcHHHHHhc-------------------------cc--ccccCCCCccccccCeEEecCCCcc--------
Q 007935 421 LLISDFIRNGSLYAALHG-------------------------FG--LNRLLPGTSKVTKNETIVTSGTGSR-------- 465 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~~L~~-------------------------~g--~~~~~~~~~~i~~~~~~~~~~~~~~-------- 465 (584)
++|+||+++++|.+++.. .| |.++.+.|+.+..+...+..++|..
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 161 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICM 161 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECccccccccccccc
Confidence 899999999999766643 22 3445555555555555666665432
Q ss_pred ------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhc-CCCCccccCh
Q 007935 466 ------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE-RRPLSEVIDP 538 (584)
Q Consensus 466 ------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~d~ 538 (584)
...++..|+|||++.. ..++.++|||||||++|||++|+.||.... ............ ...+++.+++
T Consensus 162 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~----~~~~~~~~~~~~~~~~~p~~~~~ 236 (264)
T cd06653 162 SGTGIKSVTGTPYWMSPEVISG-EGYGRKADVWSVACTVVEMLTEKPPWAEYE----AMAAIFKIATQPTKPMLPDGVSD 236 (264)
T ss_pred cCccccccCCcccccCHhhhcC-CCCCccccHHHHHHHHHHHHhCCCCCCccC----HHHHHHHHHcCCCCCCCCcccCH
Confidence 1247788999998544 678999999999999999999999997421 122222211111 1112333333
Q ss_pred hhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 539 ALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 539 ~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
. +.+++.+||+ +|..||++.+++.
T Consensus 237 ~-------------~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 237 A-------------CRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred H-------------HHHHHHHHhc-CcccCccHHHHhc
Confidence 3 3446666999 5799999998764
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.5e-23 Score=207.30 Aligned_cols=214 Identities=19% Similarity=0.290 Sum_probs=151.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC---cchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeE
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD---ATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLL 422 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~---~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~l 422 (584)
.+.||+|+||.||+++...+.. .+..||+|+++... .....+.+.+|++++.++ +|+||+++++++..++..++
T Consensus 5 ~~~lg~G~~g~v~~~~~~~~~~--~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l 82 (290)
T cd05613 5 LKVLGTGAYGKVFLVRKVSGHD--SGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHL 82 (290)
T ss_pred eeeeccCCcceEEEEEeccCCC--CCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEEE
Confidence 3579999999999998753211 11789999997542 122336788999999999 69999999999999999999
Q ss_pred eeecccCCcHHHHHhc-------------------------cc--ccccCCCCccccccCeEEecCCCcc----------
Q 007935 423 ISDFIRNGSLYAALHG-------------------------FG--LNRLLPGTSKVTKNETIVTSGTGSR---------- 465 (584)
Q Consensus 423 V~Ey~~~GsL~~~L~~-------------------------~g--~~~~~~~~~~i~~~~~~~~~~~~~~---------- 465 (584)
||||+++|+|.+++.. .| |+++.+.|+.+..+..++..+++..
T Consensus 83 v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 162 (290)
T cd05613 83 ILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVER 162 (290)
T ss_pred EEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceecccccccc
Confidence 9999999999777642 23 4566666666666666666666422
Q ss_pred --cccCCCcccCccccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhh
Q 007935 466 --ISAISNVYLAPEARIYG-SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVK 542 (584)
Q Consensus 466 --~~~gt~~y~aPE~~~~~-~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~ 542 (584)
...|+..|+|||++..+ ..++.++||||||+++|||+||+.||..... ......+.........+.+..+++.+
T Consensus 163 ~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-- 239 (290)
T cd05613 163 AYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGE-KNSQAEISRRILKSEPPYPQEMSALA-- 239 (290)
T ss_pred cccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCc-cccHHHHHHHhhccCCCCCccCCHHH--
Confidence 12478889999986542 2467899999999999999999999864221 22334444444333333333344433
Q ss_pred hhhHHHHHHHHHHHHhcccCCCCCCCC-----ChHHHHH
Q 007935 543 EIHAKRQVLATFHIALNCTELDPEFRP-----RMRTVSE 576 (584)
Q Consensus 543 ~~~~~~~~~~~~~l~~~Cl~~~P~~RP-----t~~ev~~ 576 (584)
.+++.+||+.||++|| ++.+++.
T Consensus 240 -----------~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 240 -----------KDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred -----------HHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 4567779999999997 5666653
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.7e-23 Score=213.60 Aligned_cols=218 Identities=18% Similarity=0.266 Sum_probs=145.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC---------
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN--------- 417 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~--------- 417 (584)
.+.||+|+||.||+|.....+ +.||+|.+..... ...+.+.+|++++++++||||+++++++...
T Consensus 10 ~~~Lg~g~~g~vy~~~~~~~~-----~~v~iK~i~~~~~-~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 10 LRPLGCGSNGLVFSAVDSDCD-----KRVAVKKIVLTDP-QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred EEEecCCCCEEEEEEEECCCC-----cEEEEEEEecCCC-chHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 457999999999999987765 7999999876533 3347789999999999999999999876654
Q ss_pred -----CceeEeeecccCCcHHHHH------------------------hccc--ccccCCCCcccccc-CeEEecCCCcc
Q 007935 418 -----DEKLLISDFIRNGSLYAAL------------------------HGFG--LNRLLPGTSKVTKN-ETIVTSGTGSR 465 (584)
Q Consensus 418 -----~~~~lV~Ey~~~GsL~~~L------------------------~~~g--~~~~~~~~~~i~~~-~~~~~~~~~~~ 465 (584)
...++||||++ ++|.+++ |+.| |+++.+.|+.+..+ ..++..+++..
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~dfg~~ 162 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLEQGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFGLA 162 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCcccc
Confidence 35789999997 4775443 4444 45566666555432 33445555422
Q ss_pred --------------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC
Q 007935 466 --------------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP 531 (584)
Q Consensus 466 --------------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~ 531 (584)
...++..|+|||++..+..++.++|||||||++|||++|+.||..... ... ..........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~----~~~-~~~~~~~~~~ 237 (342)
T cd07854 163 RIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHE----LEQ-MQLILESVPV 237 (342)
T ss_pred eecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCH----HHH-HHHHHHhcCC
Confidence 124677899999865556788999999999999999999999974321 111 1111000000
Q ss_pred --------CccccChhhh-------hhh--hHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 532 --------LSEVIDPALV-------KEI--HAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 532 --------~~~~~d~~~~-------~~~--~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
........+. ... .......++.+++..|++.||++|||+.|++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 238 VREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred CChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 0000000000 000 00011235678999999999999999999984
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-23 Score=208.52 Aligned_cols=206 Identities=17% Similarity=0.262 Sum_probs=151.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC--CcchhhHhHHHHHHHHHhcC-CCceeeeeEEEEeCCceeEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG--DATWRFKDFESEVEAIARVQ-HPNIVRLKAFYYANDEKLLI 423 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~~f~~Ei~~l~~l~-HpnIV~l~g~~~~~~~~~lV 423 (584)
.+.||+|+||.||++....++ +.||+|.+... ......+.+.+|++++++++ ||||+++++++..++..++|
T Consensus 6 ~~~lg~g~~~~vy~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 6 GKIIGEGSFSTVVLAKEKETN-----KEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred eeeecCCCceEEEEEEEcCCC-----CEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 357999999999999987655 79999998763 12233467899999999998 99999999999999999999
Q ss_pred eecccCCcHHHHHhc-------------------------cc--ccccCCCCccccccCeEEecCCCccc----------
Q 007935 424 SDFIRNGSLYAALHG-------------------------FG--LNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~~-------------------------~g--~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
|||+++|+|.+++.. .| |.++.+.|+.+..++.++..+++...
T Consensus 81 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~ 160 (280)
T cd05581 81 LEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPES 160 (280)
T ss_pred EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCcccccc
Confidence 999999999766643 33 44555566666555556655554211
Q ss_pred ---------------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHH
Q 007935 467 ---------------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKA 525 (584)
Q Consensus 467 ---------------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~ 525 (584)
..++..|+|||+... ..++.++||||||++++|+++|+.||.... ........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-----~~~~~~~~ 234 (280)
T cd05581 161 NKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNE-KPAGKSSDLWALGCIIYQMLTGKPPFRGSN-----EYLTFQKI 234 (280)
T ss_pred CCCCCccccccccccccccccccCCccccCHHHhCC-CCCChhhhHHHHHHHHHHHHhCCCCCCCcc-----HHHHHHHH
Confidence 235778999998554 578999999999999999999999997532 12222233
Q ss_pred hhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCCh----HHHHH
Q 007935 526 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRM----RTVSE 576 (584)
Q Consensus 526 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~----~ev~~ 576 (584)
......++..+++. +.+++.+||+.+|++||++ .++++
T Consensus 235 ~~~~~~~~~~~~~~-------------~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 235 LKLEYSFPPNFPPD-------------AKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred HhcCCCCCCccCHH-------------HHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 33333333334333 3457777999999999999 77654
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.3e-23 Score=206.72 Aligned_cols=219 Identities=17% Similarity=0.247 Sum_probs=151.2
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcc-hhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-WRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~-~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
+.||+|++|.||++....++ +.+|+|+++..... ...+.+.+|++++++++|+||+++++++..++..++||||
T Consensus 5 ~~i~~g~~~~v~~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 79 (283)
T cd05118 5 GKIGEGTYGVVYKARDKLTG-----EIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEF 79 (283)
T ss_pred eeeecCCCceEEEEEcCCCC-----cEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEec
Confidence 46999999999999987665 88999998765322 3346788999999999999999999999999999999999
Q ss_pred ccCCcHHHHHh--------------------------cc--cccccCCCCccccccCeEEecCCCcc-----------cc
Q 007935 427 IRNGSLYAALH--------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR-----------IS 467 (584)
Q Consensus 427 ~~~GsL~~~L~--------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~ 467 (584)
+++ +|.+++. +. .|.++.+.|+.+..+..++..+++.. ..
T Consensus 80 ~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~~ 158 (283)
T cd05118 80 MDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHY 158 (283)
T ss_pred cCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccCc
Confidence 975 7755543 33 34566666666665555655555422 13
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcC----------------CC
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER----------------RP 531 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~----------------~~ 531 (584)
.++..|+|||.+.....++.++||||||+++|||+||+.||......+ .+.... ...... ..
T Consensus 159 ~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 236 (283)
T cd05118 159 VVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEID-QLFKIF-RTLGTPDPEVWPKFTSLARNYKFS 236 (283)
T ss_pred cCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHH-HHcCCCchHhcccchhhhhhhhhh
Confidence 467789999986553378999999999999999999999986532210 011110 000000 00
Q ss_pred CccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 532 ~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+...+..... .......++.+++..||+.||.+||++.+++.
T Consensus 237 ~~~~~~~~~~~--~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 237 FPKKAGMPLPK--LFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hccccccCHHH--hhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 00000000000 01123456788999999999999999999975
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=2e-23 Score=212.96 Aligned_cols=217 Identities=19% Similarity=0.224 Sum_probs=148.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCC------c
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYAND------E 419 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~------~ 419 (584)
.+.||+|+||.||++.....+ ..||||++.... .....+.+.+|++++++++||||+++++++..+. .
T Consensus 20 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 94 (343)
T cd07880 20 LKQVGSGAYGTVCSALDRRTG-----AKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHD 94 (343)
T ss_pred EEEeeecCCeEEEEEEECCCC-----cEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccce
Confidence 357999999999999977655 789999986542 2223357889999999999999999999987654 3
Q ss_pred eeEeeecccCCcHHHH------------------------Hhccc--ccccCCCCccccccCeEEecCCCccc-------
Q 007935 420 KLLISDFIRNGSLYAA------------------------LHGFG--LNRLLPGTSKVTKNETIVTSGTGSRI------- 466 (584)
Q Consensus 420 ~~lV~Ey~~~GsL~~~------------------------L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~------- 466 (584)
.++||||+ +++|.++ ||+.| |+++.+.|+.+..+..++..++|...
T Consensus 95 ~~lv~e~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~ 173 (343)
T cd07880 95 FYLVMPFM-GTDLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDSEMT 173 (343)
T ss_pred EEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccccccccCcc
Confidence 58999999 6677544 34444 46666667666666666666665332
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccC--------
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVID-------- 537 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d-------- 537 (584)
..++..|+|||++.....++.++|||||||++||+++|+.||..... .................+.
T Consensus 174 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (343)
T cd07880 174 GYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDH-----LDQLMEIMKVTGTPSKEFVQKLQSEDA 248 (343)
T ss_pred ccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHhcCCCCHHHHHhhcchhH
Confidence 35678899999865434688999999999999999999999975321 1111111110000000000
Q ss_pred ------------hhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 538 ------------PALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 538 ------------~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
..+... .......+.+++.+|++.||++|||+.+++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 249 KNYVKKLPRFRKKDFRSL--LPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred HHHHHhccccCcchHHHh--ccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000000 0011234678999999999999999999983
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.7e-24 Score=225.52 Aligned_cols=226 Identities=14% Similarity=0.166 Sum_probs=143.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCC--------------ceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeE
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGA--------------PTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKA 412 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~--------------~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g 412 (584)
.+.||+|+||+||++..+....... ...++.|.+.. .....+.|.+|+++|++++|||||++++
T Consensus 153 i~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~--~~~~~~~~~~Ei~il~~l~HpnIv~l~~ 230 (501)
T PHA03210 153 IDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKA--GSRAAIQLENEILALGRLNHENILKIEE 230 (501)
T ss_pred EeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhc--chHHHHHHHHHHHHHHhCCCCCcCcEeE
Confidence 4689999999999987654321000 00111122221 1223367899999999999999999999
Q ss_pred EEEeCCceeEeeecccCCcHH------------------------------HHHhccc--ccccCCCCccccccCeEEec
Q 007935 413 FYYANDEKLLISDFIRNGSLY------------------------------AALHGFG--LNRLLPGTSKVTKNETIVTS 460 (584)
Q Consensus 413 ~~~~~~~~~lV~Ey~~~GsL~------------------------------~~L~~~g--~~~~~~~~~~i~~~~~~~~~ 460 (584)
++.+.+..|+|+|++.+ +|. +|||+.| |+++++.|+.+..++.++..
T Consensus 231 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~~vkL~ 309 (501)
T PHA03210 231 ILRSEANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGKIVLG 309 (501)
T ss_pred EEEECCeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEE
Confidence 99999999999998753 443 3445444 67888888888777778887
Q ss_pred CCCccc------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCC-CCCCCCC-CCcHHHHHHHHh
Q 007935 461 GTGSRI------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP-DAGPEND-GKGLESLVRKAF 526 (584)
Q Consensus 461 ~~~~~~------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p-~~~~~~~-~~~l~~~~~~~~ 526 (584)
+||... ..||..|+|||++.. ..++.++|||||||++|||++|+.+ +...... ...+...+....
T Consensus 310 DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~ 388 (501)
T PHA03210 310 DFGTAMPFEKEREAFDYGWVGTVATNSPEILAG-DGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLS 388 (501)
T ss_pred eCCCceecCcccccccccccCCcCCCCchhhcC-CCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcc
Confidence 876432 358999999999554 6899999999999999999998864 4321111 111111111100
Q ss_pred hcCCCCccc-------c--------ChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 527 RERRPLSEV-------I--------DPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 527 ~~~~~~~~~-------~--------d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.....+++. + ...+...+........+.+++.+|++.||++|||+.|+++
T Consensus 389 ~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~ 453 (501)
T PHA03210 389 VCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA 453 (501)
T ss_pred cChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence 000000000 0 0000001111011134566788999999999999999985
|
|
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.9e-23 Score=213.28 Aligned_cols=222 Identities=18% Similarity=0.226 Sum_probs=148.8
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC------Cce
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN------DEK 420 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~------~~~ 420 (584)
+.||+|+||.||+|....++ +.||+|++.... .....+.+.+|+.++++++||||+++++++... +..
T Consensus 23 ~~lg~G~~g~v~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 97 (345)
T cd07877 23 SPVGSGAYGSVCAAFDTKTG-----LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDV 97 (345)
T ss_pred EEeeecCCeEEEEEEEcCCC-----eEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccccccE
Confidence 57999999999999987655 899999997642 222346788999999999999999999988643 346
Q ss_pred eEeeecccCCcHHHH------------------------Hhccc--ccccCCCCccccccCeEEecCCCccc--------
Q 007935 421 LLISDFIRNGSLYAA------------------------LHGFG--LNRLLPGTSKVTKNETIVTSGTGSRI-------- 466 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~~------------------------L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~-------- 466 (584)
++++|++ +++|.++ ||+.| |+++.+.|+.+..++.++..+++...
T Consensus 98 ~lv~~~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~ 176 (345)
T cd07877 98 YLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 176 (345)
T ss_pred EEEehhc-ccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEecccccccccccccc
Confidence 8888887 6777543 44444 56777777777767777776765322
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChh-hhhhhh
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPA-LVKEIH 545 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~-~~~~~~ 545 (584)
..++..|+|||++.....++.++|||||||++|||++|+.||...... ..+....+........+...+... ......
T Consensus 177 ~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (345)
T cd07877 177 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPGAELLKKISSESARNYIQ 255 (345)
T ss_pred cccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHhhcccHhHHHHHH
Confidence 357888999998554356889999999999999999999999643211 111111111100000000000000 000000
Q ss_pred H-------------HHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 546 A-------------KRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 546 ~-------------~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
. ......+.+++.+|++.||.+||++.+++.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 299 (345)
T cd07877 256 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 299 (345)
T ss_pred HhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhc
Confidence 0 001235678999999999999999999874
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.6e-23 Score=199.75 Aligned_cols=206 Identities=20% Similarity=0.305 Sum_probs=153.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc-chhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~-~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||++....++ ..||+|++..... ....+.+.+|++++++++|||++++++.+...+..++|+|
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e 79 (258)
T cd08215 5 IKQIGKGSFGKVYLVRRKSDG-----KLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVME 79 (258)
T ss_pred EeeeccCCCeEEEEEEEcCCC-----cEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEE
Confidence 357999999999999987655 7999999976532 2345779999999999999999999999999999999999
Q ss_pred cccCCcHHHHHhc-----------------------------cc--ccccCCCCccccccCeEEecCCCcc---------
Q 007935 426 FIRNGSLYAALHG-----------------------------FG--LNRLLPGTSKVTKNETIVTSGTGSR--------- 465 (584)
Q Consensus 426 y~~~GsL~~~L~~-----------------------------~g--~~~~~~~~~~i~~~~~~~~~~~~~~--------- 465 (584)
|+++++|.++++. .| |.++.+.|+.+..+..++..+++..
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~ 159 (258)
T cd08215 80 YADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDL 159 (258)
T ss_pred ecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCcce
Confidence 9999999777643 22 4455556666655566666665432
Q ss_pred --cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcC-CCCccccChhhhh
Q 007935 466 --ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER-RPLSEVIDPALVK 542 (584)
Q Consensus 466 --~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~d~~~~~ 542 (584)
...|+..|+|||.... ..++.++||||+|++++||++|+.||.... ............ .+++..++
T Consensus 160 ~~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~----- 228 (258)
T cd08215 160 AKTVVGTPYYLSPELCQN-KPYNYKSDIWSLGCVLYELCTLKHPFEGEN-----LLELALKILKGQYPPIPSQYS----- 228 (258)
T ss_pred ecceeeeecccChhHhcc-CCCCccccHHHHHHHHHHHHcCCCCCCCCc-----HHHHHHHHhcCCCCCCCCCCC-----
Confidence 1356778999998544 678999999999999999999999986422 233333332221 11222222
Q ss_pred hhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 543 EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 543 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
..+.+++.+||..+|++|||+.|+++
T Consensus 229 --------~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 229 --------SELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred --------HHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 23456788899999999999999975
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=99.90 E-value=3e-23 Score=203.30 Aligned_cols=205 Identities=19% Similarity=0.246 Sum_probs=142.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC----CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeE
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG----DATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLL 422 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~----~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~l 422 (584)
.+.||+|+||.||+++....+ ..+++|.++.. .......++.+|+.++++++||||+++++++.+.+..++
T Consensus 5 ~~~ig~g~~g~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 79 (260)
T cd08222 5 QQRLGKGSFGTVYLVKDKKAV-----AEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCI 79 (260)
T ss_pred eeeecCCCCceEEEEEecCCC-----CcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEE
Confidence 357999999999999887653 34445554432 122223467789999999999999999999999999999
Q ss_pred eeecccCCcHHHHHhc-----------------------------cc--ccccCCCCccccccCeEEecCCCcc------
Q 007935 423 ISDFIRNGSLYAALHG-----------------------------FG--LNRLLPGTSKVTKNETIVTSGTGSR------ 465 (584)
Q Consensus 423 V~Ey~~~GsL~~~L~~-----------------------------~g--~~~~~~~~~~i~~~~~~~~~~~~~~------ 465 (584)
||||+++++|.++++. .| |.++.+.+..+.. ..++..+++..
T Consensus 80 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~ 158 (260)
T cd08222 80 ITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGS 158 (260)
T ss_pred EEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceeecCCC
Confidence 9999999999766542 22 3344444544432 33444554421
Q ss_pred -----cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC-CCccccChh
Q 007935 466 -----ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR-PLSEVIDPA 539 (584)
Q Consensus 466 -----~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~d~~ 539 (584)
...|+..|+|||... +..++.++||||||+++|||++|+.||... .............. ..+..++
T Consensus 159 ~~~~~~~~~~~~~~~pe~~~-~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-- 230 (260)
T cd08222 159 CDLATTFTGTPYYMSPEALK-HQGYDSKSDIWSLGCILYEMCCLAHAFEGQ-----NFLSVVLRIVEGPTPSLPETYS-- 230 (260)
T ss_pred cccccCCCCCcCccCHHHHc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCc-----cHHHHHHHHHcCCCCCCcchhc--
Confidence 234778899999854 467889999999999999999999998632 22223223222211 1111111
Q ss_pred hhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 540 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.++.+++.+||..+|++||++.|+++
T Consensus 231 -----------~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 231 -----------RQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred -----------HHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 24556888899999999999999975
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-22 Score=201.71 Aligned_cols=220 Identities=17% Similarity=0.190 Sum_probs=148.4
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc-chhhHhHHHHHHHHHhc---CCCceeeeeEEEEeCCc---
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARV---QHPNIVRLKAFYYANDE--- 419 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~-~~~~~~f~~Ei~~l~~l---~HpnIV~l~g~~~~~~~--- 419 (584)
.+.||+|+||.||+|+....+ +.||+|+++.... ......+.+|+.++.++ +||||+++++++.+.+.
T Consensus 4 ~~~l~~g~~~~v~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~ 78 (287)
T cd07838 4 LAEIGEGAYGTVYKARDLNTG-----RFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRE 78 (287)
T ss_pred EEEecccCceEEEEEEECCCC-----CEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCC
Confidence 357999999999999997754 7999999975422 22235677888887766 59999999999998777
Q ss_pred --eeEeeecccCCcHHHHHh---------------------------cc--cccccCCCCccccccCeEEecCCCcc---
Q 007935 420 --KLLISDFIRNGSLYAALH---------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR--- 465 (584)
Q Consensus 420 --~~lV~Ey~~~GsL~~~L~---------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~--- 465 (584)
.+++|||+++ +|.++++ +. -|.++.+.|+.+..+..++..+++..
T Consensus 79 ~~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~ 157 (287)
T cd07838 79 LKLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIY 157 (287)
T ss_pred ceeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceec
Confidence 9999999974 7765553 22 24555666666666666666666532
Q ss_pred -------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcC---CC----
Q 007935 466 -------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER---RP---- 531 (584)
Q Consensus 466 -------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~---~~---- 531 (584)
...++..|+|||++.. ..++.++|||||||++|||++|++||..... ...+..+........ .+
T Consensus 158 ~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 235 (287)
T cd07838 158 SFEMALTSVVVTLWYRAPEVLLQ-SSYATPVDMWSVGCIFAELFRRRPLFRGTSE-ADQLDKIFDVIGLPSEEEWPRNVS 235 (287)
T ss_pred cCCcccccccccccccChHHhcc-CCCCCcchhhhHHHHHHHHHhCCCcccCCCh-HHHHHHHHHHcCCCChHhcCCCcc
Confidence 1246778999999554 6789999999999999999999999875322 111222221110000 00
Q ss_pred -----CccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 532 -----LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 532 -----~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
............ ...-...+.+++.+||+.||++||++.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 236 LPRSSFPSYTPRSFKSF--VPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred cchhhcccccccchhhh--hhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 000001110000 0112345678999999999999999999874
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.2e-23 Score=212.70 Aligned_cols=219 Identities=17% Similarity=0.237 Sum_probs=149.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCc------
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDE------ 419 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~------ 419 (584)
...||+|++|.||+|+...++ ..||||++.... .....+.+.+|+.++++++||||+++++++...+.
T Consensus 20 ~~~ig~g~~g~vy~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 94 (343)
T cd07851 20 LSPVGSGAYGQVCSAFDTKTG-----RKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQD 94 (343)
T ss_pred EEEeccCCceEEEEEEECCCC-----cEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccccc
Confidence 467999999999999998765 789999987542 22234678899999999999999999998876654
Q ss_pred eeEeeecccCCcHHHHH------------------------hccc--ccccCCCCccccccCeEEecCCCcc--------
Q 007935 420 KLLISDFIRNGSLYAAL------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSR-------- 465 (584)
Q Consensus 420 ~~lV~Ey~~~GsL~~~L------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~-------- 465 (584)
.++|+||+ +++|.+++ |+.| |+++.+.|+.+..+..++..+++..
T Consensus 95 ~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~ 173 (343)
T cd07851 95 VYLVTHLM-GADLNNIVKCQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDEMT 173 (343)
T ss_pred EEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEcccccccccccccc
Confidence 89999998 56886554 4444 4555566666666666666666533
Q ss_pred cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCcccc-----Chhh
Q 007935 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVI-----DPAL 540 (584)
Q Consensus 466 ~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-----d~~~ 540 (584)
...++..|+|||.+.....++.++|||||||++|||+||+.||..... ...............+.+ +...
T Consensus 174 ~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~-----~~~~~~i~~~~~~~~~~~~~~~~~~~~ 248 (343)
T cd07851 174 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDH-----IDQLKRIMNLVGTPDEELLQKISSESA 248 (343)
T ss_pred CCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHHHhcCCCCHHHHhhccchhH
Confidence 235678899999865434678999999999999999999999974321 111111111100000000 0000
Q ss_pred hhhh-----------hH--HHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 541 VKEI-----------HA--KRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 541 ~~~~-----------~~--~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.... .. .....++.+++.+|++.+|++|||+.||++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 249 RNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred HHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 0000 00 011346788999999999999999999975
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=99.90 E-value=3e-23 Score=210.86 Aligned_cols=221 Identities=19% Similarity=0.211 Sum_probs=147.3
Q ss_pred ceeceeecCceEEEEEecCC--CCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeC----C
Q 007935 347 AYVVGKSKNGIMYKVVVGRG--SGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARV-QHPNIVRLKAFYYAN----D 418 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~--~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~----~ 418 (584)
.+.||+|+||.||++..... + ..||+|++.... .....+.+.+|++++.++ +|||||++++++... .
T Consensus 5 ~~~lg~G~~g~vy~~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 79 (332)
T cd07857 5 IKELGQGAYGIVCSARNAETSEE-----ETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN 79 (332)
T ss_pred EEEccccCCeEEEEEEeCCCCcC-----ceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence 45799999999999998765 3 789999987542 222346788999999999 599999999976543 4
Q ss_pred ceeEeeecccCCcHHHHH-------------------------hccc--ccccCCCCccccccCeEEecCCCccc-----
Q 007935 419 EKLLISDFIRNGSLYAAL-------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSRI----- 466 (584)
Q Consensus 419 ~~~lV~Ey~~~GsL~~~L-------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~----- 466 (584)
..++++||+. ++|.+++ |+.| |+++.+.|+.+..+..++..+++...
T Consensus 80 ~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~ 158 (332)
T cd07857 80 ELYLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSEN 158 (332)
T ss_pred cEEEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceecccc
Confidence 5789999986 5775444 4444 56677777777666667776665321
Q ss_pred ----------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC--CCcc
Q 007935 467 ----------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR--PLSE 534 (584)
Q Consensus 467 ----------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~--~~~~ 534 (584)
..||..|+|||+...+..++.++|||||||++|||++|+.||...... .............. .+..
T Consensus 159 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~ 236 (332)
T cd07857 159 PGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYV--DQLNQILQVLGTPDEETLSR 236 (332)
T ss_pred cccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHH--HHHHHHHHHhCCCCHHHHHh
Confidence 257888999998655456899999999999999999999998753211 00000000000000 0000
Q ss_pred ccChhhh--------------hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 535 VIDPALV--------------KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 535 ~~d~~~~--------------~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
..++... .... ......+.+++.+|++.||++|||+.|++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 237 IGSPKAQNYIRSLPNIPKKPFESIF-PNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred hhhhhHHHHHHhccccCCcchHhhC-CCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0000000 0000 001235678999999999999999999874
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.4e-23 Score=205.23 Aligned_cols=215 Identities=14% Similarity=0.165 Sum_probs=141.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhh----------HhHHHHHHHHHhcCCCceeeeeEEEEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRF----------KDFESEVEAIARVQHPNIVRLKAFYYA 416 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~----------~~f~~Ei~~l~~l~HpnIV~l~g~~~~ 416 (584)
.+.||+|+||.||+|....++.. ...+|+|........... .....+...+..++|+||+++++++..
T Consensus 17 ~~~LG~G~fG~Vy~~~~~~~~~~--~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~ 94 (294)
T PHA02882 17 DKLIGCGGFGCVYETQCASDHCI--NNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGCGSF 94 (294)
T ss_pred eeEEecCCCceEEEEEEcCCccc--ccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEeeeE
Confidence 45799999999999998765211 146667654332211100 112334445667799999999998765
Q ss_pred CC----ceeEeeecccCCcH-------------------------HHHHhccc--ccccCCCCccccccCeEEecCCCcc
Q 007935 417 ND----EKLLISDFIRNGSL-------------------------YAALHGFG--LNRLLPGTSKVTKNETIVTSGTGSR 465 (584)
Q Consensus 417 ~~----~~~lV~Ey~~~GsL-------------------------~~~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~ 465 (584)
.. ..++++|++.. ++ .++||+.+ |+|+++.|+.+..+...+..|||..
T Consensus 95 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~DFGla 173 (294)
T PHA02882 95 KRCRMYYRFILLEKLVE-NTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYIIDYGIA 173 (294)
T ss_pred ecCCceEEEEEEehhcc-CHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEEcCCc
Confidence 44 34677887643 22 24556544 7888999888876667777776642
Q ss_pred c------------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHH----HHH
Q 007935 466 I------------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLES----LVR 523 (584)
Q Consensus 466 ~------------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~----~~~ 523 (584)
. ..||+.|+|||+.. +..++.++|||||||++|||++|+.||............ +..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~-~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~ 252 (294)
T PHA02882 174 SHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHN-GACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIK 252 (294)
T ss_pred eeeccCCcccccccccccccCCCccccCHHHhC-CCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHH
Confidence 1 25899999999854 578999999999999999999999999864322211111 111
Q ss_pred HHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHH
Q 007935 524 KAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579 (584)
Q Consensus 524 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~ 579 (584)
......... . .....+.+++..||..+|++||++.++.+.|+
T Consensus 253 ~~~~~~~~~-~-------------~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 253 RLHEGKIKI-K-------------NANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred Hhhhhhhcc-C-------------CCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 111111110 0 11234567888899999999999999998763
|
|
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.3e-23 Score=202.21 Aligned_cols=219 Identities=16% Similarity=0.250 Sum_probs=151.2
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
+.||+|++|.||+|+....+ +.||+|.+.... .....+.+.+|++++++++|+||+++++++.+.+..++||||
T Consensus 5 ~~ig~g~~~~vy~~~~~~~~-----~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 79 (282)
T cd07829 5 EKLGEGTYGVVYKARDKKTG-----EIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEY 79 (282)
T ss_pred hcccccCcceEEEeeecCCC-----cEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecC
Confidence 46999999999999998765 899999998753 222346788999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc--------------------------cc--ccccCCCCccccccCeEEecCCCccc-----------c
Q 007935 427 IRNGSLYAALHG--------------------------FG--LNRLLPGTSKVTKNETIVTSGTGSRI-----------S 467 (584)
Q Consensus 427 ~~~GsL~~~L~~--------------------------~g--~~~~~~~~~~i~~~~~~~~~~~~~~~-----------~ 467 (584)
++ ++|.++++. .| |+++.+.|+.+..+..++..+++... .
T Consensus 80 ~~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~ 158 (282)
T cd07829 80 CD-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHE 158 (282)
T ss_pred cC-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCccccCcc
Confidence 98 588666542 23 45566666666666666666655321 2
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhc---------------CCCC
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE---------------RRPL 532 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~---------------~~~~ 532 (584)
.++..|+|||.+.....++.++|||||||++||+++|+.||...... ..+..... .... ....
T Consensus 159 ~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 236 (282)
T cd07829 159 VVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEI-DQLFKIFQ-ILGTPTEESWPGVTKLPDYKPTF 236 (282)
T ss_pred ccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHH-HHHHHHHH-HhCCCcHHHHHhhcccccccccc
Confidence 34667999998665447899999999999999999999998653211 00111110 0000 0000
Q ss_pred ccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 533 SEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 533 ~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+........... ......+.+++.+||+.+|++||++.+++.
T Consensus 237 ~~~~~~~~~~~~--~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 237 PKFPPKDLEKVL--PRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred cccCccchHHhc--ccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 000000000000 001346788999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.2e-23 Score=193.73 Aligned_cols=204 Identities=16% Similarity=0.296 Sum_probs=155.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC--CcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG--DATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLI 423 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV 423 (584)
-++||+|+|.+|..+++..+. +.+|+|++++. ...+.++=...|-.+..+. +||.+|.++.+|+++...++|
T Consensus 255 l~vigrgsyakvl~~~~~~t~-----qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffv 329 (593)
T KOG0695|consen 255 LRVIGRGSYAKVLLVRLKKTD-----QIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFV 329 (593)
T ss_pred eeeecCcchhhhhheehcccc-----eeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEE
Confidence 468999999999999998887 89999999876 2333334456777777776 799999999999999999999
Q ss_pred eecccCCcH-------------------------HHHHhcccc--cccCCCCccccccCeEEecCCC-----------cc
Q 007935 424 SDFIRNGSL-------------------------YAALHGFGL--NRLLPGTSKVTKNETIVTSGTG-----------SR 465 (584)
Q Consensus 424 ~Ey~~~GsL-------------------------~~~L~~~g~--~~~~~~~~~i~~~~~~~~~~~~-----------~~ 465 (584)
.||+++|+| ..|||..|+ ++++.+|..+...+.++..+.| ++
T Consensus 330 ieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~~gd~ts 409 (593)
T KOG0695|consen 330 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDTTS 409 (593)
T ss_pred EEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCCCCcccc
Confidence 999999998 366777776 6777788877777777776554 34
Q ss_pred cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCC--CCCCCCcHHHHHHHHhh-cCCCCccccChhhhh
Q 007935 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAG--PENDGKGLESLVRKAFR-ERRPLSEVIDPALVK 542 (584)
Q Consensus 466 ~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~--~~~~~~~l~~~~~~~~~-~~~~~~~~~d~~~~~ 542 (584)
..+||+.|+|||+ .+|..|...+|.|++||+++||+.|+.||+- .++.+.+..++.-+..- ....++..++-...
T Consensus 410 tfcgtpnyiapei-lrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiriprslsvkas- 487 (593)
T KOG0695|consen 410 TFCGTPNYIAPEI-LRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPRSLSVKAS- 487 (593)
T ss_pred cccCCCcccchhh-hcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcccccceeehhhH-
Confidence 5689999999999 6668999999999999999999999999973 33334445555433332 22233443333322
Q ss_pred hhhHHHHHHHHHHHHhcccCCCCCCCC
Q 007935 543 EIHAKRQVLATFHIALNCTELDPEFRP 569 (584)
Q Consensus 543 ~~~~~~~~~~~~~l~~~Cl~~~P~~RP 569 (584)
.+...-+++||.+|.
T Consensus 488 ------------~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 488 ------------HVLKGFLNKDPKERL 502 (593)
T ss_pred ------------HHHHHhhcCCcHHhc
Confidence 244457888998884
|
|
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-22 Score=206.61 Aligned_cols=225 Identities=17% Similarity=0.241 Sum_probs=154.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc-chhhHhHHHHHHHHHhcCCCceeeeeEEEEeCC-----ce
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPNIVRLKAFYYAND-----EK 420 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~-~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~-----~~ 420 (584)
.+.||+|++|.||+|+....+ ..||||++..... ....+.+.+|++++++++||||+++++++...+ ..
T Consensus 5 ~~~ig~g~~~~v~~~~~~~~~-----~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (330)
T cd07834 5 LKPIGSGAYGVVCSAVDKRTG-----RKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDV 79 (330)
T ss_pred eeeecCCCCeEEEEEEeCCCC-----cEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccce
Confidence 457999999999999987654 7999999976422 334478999999999999999999999998875 78
Q ss_pred eEeeecccCCcHHHHH-------------------------hccc--ccccCCCCccccccCeEEecCCCcc--------
Q 007935 421 LLISDFIRNGSLYAAL-------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSR-------- 465 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~~L-------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~-------- 465 (584)
++||||+++ +|.+++ |+.| |+++.+.|+.+..+..++..+++..
T Consensus 80 ~lv~e~~~~-~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~ 158 (330)
T cd07834 80 YIVTELMET-DLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDED 158 (330)
T ss_pred EEEecchhh-hHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeeccccc
Confidence 999999984 675544 3334 4666667766666666666555422
Q ss_pred ------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC-CCcc----
Q 007935 466 ------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR-PLSE---- 534 (584)
Q Consensus 466 ------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~~---- 534 (584)
...++..|+|||++.....++.++||||||+++|||++|+.||.+... ............ +..+
T Consensus 159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~-----~~~~~~i~~~~~~~~~~~~~~ 233 (330)
T cd07834 159 EKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDY-----IDQLNLIVEVLGTPSEEDLKF 233 (330)
T ss_pred ccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCH-----HHHHHHHHHhcCCCChhHhhh
Confidence 124677899999965533789999999999999999999999975322 111111111100 0000
Q ss_pred ccChhhhhhhh-------------HHHHHHHHHHHHhcccCCCCCCCCChHHHHHH--HHhhh
Q 007935 535 VIDPALVKEIH-------------AKRQVLATFHIALNCTELDPEFRPRMRTVSES--LDRVK 582 (584)
Q Consensus 535 ~~d~~~~~~~~-------------~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~--L~~i~ 582 (584)
........... .......+.+++.+||+.+|++|||+.++++. +++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~ 296 (330)
T cd07834 234 ITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLH 296 (330)
T ss_pred ccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhc
Confidence 00000000000 00112456789999999999999999999863 55443
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.3e-23 Score=224.44 Aligned_cols=171 Identities=21% Similarity=0.300 Sum_probs=143.0
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc--chhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA--TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~--~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
++||+|+||.|..++++.++ +.+|.|++++... ......|..|-.+|..-+.+-||+++-.|+++++.|+|||
T Consensus 81 KvIGrGaFGEV~lVr~k~t~-----~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlVMd 155 (1317)
T KOG0612|consen 81 KVIGRGAFGEVALVRHKSTE-----KVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLVMD 155 (1317)
T ss_pred HHhcccccceeEEEEeeccc-----cchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEEEe
Confidence 68999999999999999887 8999999987421 1223668899999999999999999999999999999999
Q ss_pred cccCCcHHHHHhc---------------------------ccccccCCCCccccccCeEEecCCCcc------------c
Q 007935 426 FIRNGSLYAALHG---------------------------FGLNRLLPGTSKVTKNETIVTSGTGSR------------I 466 (584)
Q Consensus 426 y~~~GsL~~~L~~---------------------------~g~~~~~~~~~~i~~~~~~~~~~~~~~------------~ 466 (584)
||+||||...|.. +.|+|++|+|..+...+++...|||+. .
T Consensus 156 Y~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~V~s~~ 235 (1317)
T KOG0612|consen 156 YMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTVRSSV 235 (1317)
T ss_pred cccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCCCCcEEecc
Confidence 9999999655532 358999999999999999999998853 3
Q ss_pred ccCCCcccCcccccc---C-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhc
Q 007935 467 SAISNVYLAPEARIY---G-SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE 528 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~---~-~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~ 528 (584)
.+|||.|++||++.. + ..|+..+|.||+||++|||+.|..||.. ..++....++...
T Consensus 236 aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYa-----dslveTY~KIm~h 296 (1317)
T KOG0612|consen 236 AVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYA-----DSLVETYGKIMNH 296 (1317)
T ss_pred ccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchH-----HHHHHHHHHHhch
Confidence 589999999998632 2 5789999999999999999999999983 4455555555443
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.2e-23 Score=209.17 Aligned_cols=199 Identities=23% Similarity=0.321 Sum_probs=154.4
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEeeec
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
..+|.|+|+.|-.+...... +..+||++.+.. .+-.+|+.++.+. +||||+++.+.+.+..+.|+|||+
T Consensus 328 ~~~~~gs~s~~~~~~~~~t~-----~~~~vkii~~~~-----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~ 397 (612)
T KOG0603|consen 328 EELGEGSFSAVKYCESSPTD-----QEPAVKIISKRA-----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMEL 397 (612)
T ss_pred cccCCCCccceeeeeccccc-----cchhheeccccc-----cccccccchhhhhcCCCcceeecceecCCceeeeeehh
Confidence 34999999999999988876 889999998752 2234688777766 799999999999999999999999
Q ss_pred ccCCcHH------------------------HHHhccc--ccccCCCCccc-cccCeEEecCCCcc--------cccCCC
Q 007935 427 IRNGSLY------------------------AALHGFG--LNRLLPGTSKV-TKNETIVTSGTGSR--------ISAISN 471 (584)
Q Consensus 427 ~~~GsL~------------------------~~L~~~g--~~~~~~~~~~i-~~~~~~~~~~~~~~--------~~~gt~ 471 (584)
+.+|-+. +|||+.| |+|++++|+.+ ...+.+...+||.. ..+.|.
T Consensus 398 l~g~ell~ri~~~~~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~tp~~t~ 477 (612)
T KOG0603|consen 398 LDGGELLRRIRSKPEFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCDTPALTL 477 (612)
T ss_pred ccccHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchhhcccchhh
Confidence 9999873 5567665 68999999988 46677777777632 236688
Q ss_pred cccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHHHHH
Q 007935 472 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVL 551 (584)
Q Consensus 472 ~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 551 (584)
.|.|||+.. ...||+++|+|||||+||||++|+.||.....+ .++....... ++.+.++...++
T Consensus 478 ~y~APEvl~-~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~----~ei~~~i~~~--~~s~~vS~~AKd--------- 541 (612)
T KOG0603|consen 478 QYVAPEVLA-IQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG----IEIHTRIQMP--KFSECVSDEAKD--------- 541 (612)
T ss_pred cccChhhhc-cCCCCcchhhHHHHHHHHHHHhCCCccccCCch----HHHHHhhcCC--ccccccCHHHHH---------
Confidence 899999965 589999999999999999999999999865443 2222222211 233556665555
Q ss_pred HHHHHHhcccCCCCCCCCChHHHHH
Q 007935 552 ATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 552 ~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
|+..||+.||.+||+|.|+..
T Consensus 542 ----Ll~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 542 ----LLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred ----HHHHhccCChhhCcChhhhcc
Confidence 444599999999999999864
|
|
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.9e-23 Score=221.06 Aligned_cols=205 Identities=23% Similarity=0.317 Sum_probs=146.9
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC----------
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN---------- 417 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~---------- 417 (584)
.+||+||||.|||++.+-.| +.+|||++...........+.+|++++++|+|||||+++..+.+.
T Consensus 485 ~lLGkGGFG~VvkVRNKlDG-----r~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei~ 559 (1351)
T KOG1035|consen 485 ELLGKGGFGSVVKVRNKLDG-----REYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEIV 559 (1351)
T ss_pred HHhcCCCCceEEEEeecccc-----hhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccccccc
Confidence 47999999999999988776 899999998765444557789999999999999999997421100
Q ss_pred --------------------------------------------------------------------------------
Q 007935 418 -------------------------------------------------------------------------------- 417 (584)
Q Consensus 418 -------------------------------------------------------------------------------- 417 (584)
T Consensus 560 ~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~~ 639 (1351)
T KOG1035|consen 560 ASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEGS 639 (1351)
T ss_pred ccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCCc
Confidence
Q ss_pred -----------------------------CceeEeeecccCCcHHHH--------------------------Hhccc--
Q 007935 418 -----------------------------DEKLLISDFIRNGSLYAA--------------------------LHGFG-- 440 (584)
Q Consensus 418 -----------------------------~~~~lV~Ey~~~GsL~~~--------------------------L~~~g-- 440 (584)
-..||-||||+.-.+.++ +|+.|
T Consensus 640 ~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~giI 719 (1351)
T KOG1035|consen 640 VILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGII 719 (1351)
T ss_pred cccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCcee
Confidence 014788999998666444 44444
Q ss_pred ccccCCCCccccccCeEEecCCCc-----------------------------ccccCCCcccCccccccCC--CCCCcc
Q 007935 441 LNRLLPGTSKVTKNETIVTSGTGS-----------------------------RISAISNVYLAPEARIYGS--KFTQKC 489 (584)
Q Consensus 441 ~~~~~~~~~~i~~~~~~~~~~~~~-----------------------------~~~~gt~~y~aPE~~~~~~--~~~~ks 489 (584)
|+|+++.|+.+..+..+++.+||. +..+||.-|+|||++.... +|+.|+
T Consensus 720 HRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~Ki 799 (1351)
T KOG1035|consen 720 HRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKI 799 (1351)
T ss_pred eccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchh
Confidence 799999998877777777666541 2247899999999965544 699999
Q ss_pred chhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccc---cChhhhhhhhHHHHHHHHHHHHhcccCCCCC
Q 007935 490 DVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEV---IDPALVKEIHAKRQVLATFHIALNCTELDPE 566 (584)
Q Consensus 490 DV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~---~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~ 566 (584)
|+||+|||++||+. ||.. ...-...+ ..++ ...++.. .+++. ..-..++.++++.||.
T Consensus 800 DmYSLGIVlFEM~y---PF~T----sMERa~iL-~~LR-~g~iP~~~~f~~~~~----------~~e~slI~~Ll~hdP~ 860 (1351)
T KOG1035|consen 800 DMYSLGIVLFEMLY---PFGT----SMERASIL-TNLR-KGSIPEPADFFDPEH----------PEEASLIRWLLSHDPS 860 (1351)
T ss_pred hhHHHHHHHHHHhc---cCCc----hHHHHHHH-Hhcc-cCCCCCCcccccccc----------hHHHHHHHHHhcCCCc
Confidence 99999999999997 5643 11111111 2222 1122222 33333 2234688889999999
Q ss_pred CCCChHHHHH
Q 007935 567 FRPRMRTVSE 576 (584)
Q Consensus 567 ~RPt~~ev~~ 576 (584)
+|||+.|+++
T Consensus 861 kRPtA~eLL~ 870 (1351)
T KOG1035|consen 861 KRPTATELLN 870 (1351)
T ss_pred cCCCHHHHhh
Confidence 9999999985
|
|
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.2e-22 Score=210.25 Aligned_cols=208 Identities=19% Similarity=0.276 Sum_probs=153.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEe-----CCce
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYA-----NDEK 420 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~-----~~~~ 420 (584)
..+||.|.+|.||+++..+.+ +.+|||++....+.+ +++..|..+++.. +|||++.++|++.. +++.
T Consensus 24 ~evig~Gtygkv~k~k~~~~~-----~~aa~kI~~~~~d~d--eEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqL 96 (953)
T KOG0587|consen 24 IEVIGNGTYGKVYKGRHVKTG-----QLAAIKIMDPTEDEE--EEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQL 96 (953)
T ss_pred EEEEeeccceeEEEEeeeecC-----ceeeeEeecCCcccc--HHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeE
Confidence 357999999999999988876 889999887654433 7788899999988 79999999999975 5789
Q ss_pred eEeeecccCCcHHHHHhc---------------------------c--cccccCCCCccccccCeEEecCCCcc------
Q 007935 421 LLISDFIRNGSLYAALHG---------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSR------ 465 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~~L~~---------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~------ 465 (584)
|||||||.+||.-|.+.+ . -|+|++..|+.....+.++..|||.+
T Consensus 97 WLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT 176 (953)
T KOG0587|consen 97 WLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDST 176 (953)
T ss_pred EEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeeeeecc
Confidence 999999999998655543 1 34556556666666677777777633
Q ss_pred -----cccCCCcccCccccccC----CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCcccc
Q 007935 466 -----ISAISNVYLAPEARIYG----SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVI 536 (584)
Q Consensus 466 -----~~~gt~~y~aPE~~~~~----~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 536 (584)
+.+||+.|||||++... ..|+..+|+||+|++..||.-|.+|+.++..- ..+ -...+. |
T Consensus 177 ~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPm----raL-F~IpRN--P----- 244 (953)
T KOG0587|consen 177 VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPM----RAL-FLIPRN--P----- 244 (953)
T ss_pred cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchh----hhh-ccCCCC--C-----
Confidence 35899999999986432 34678999999999999999999998754331 111 111111 1
Q ss_pred ChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 537 DPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 537 d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.|.+.. ...-..++.+++..|+.+|-++||++.++++
T Consensus 245 PPkLkr---p~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 245 PPKLKR---PKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred Cccccc---hhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 122221 1122346677888899999999999999874
|
|
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.3e-23 Score=190.75 Aligned_cols=164 Identities=19% Similarity=0.283 Sum_probs=131.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcc-hhhHhHHHHHHHHHhcCCCceeeeeEEEEe-CCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-WRFKDFESEVEAIARVQHPNIVRLKAFYYA-NDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~-~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~-~~~~~lV~ 424 (584)
...||+|.||.||||...++.+.- .+.+|+|+++...+. .......||+.+++.++|||||.|..++.+ +...++++
T Consensus 29 ig~Ig~GTYG~VykA~~~~~n~kr-~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~l~f 107 (438)
T KOG0666|consen 29 IGKIGRGTYGKVYKAVRKNTNDKR-TKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVWLLF 107 (438)
T ss_pred cceecccccceeeEeeeccCCccc-chhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEEEEe
Confidence 357999999999999776654321 258999999876322 222567899999999999999999999988 77899999
Q ss_pred ecccCCcHHHHHh------------------------------cc--cccccCCCCcccccc----CeEEecCCCccc--
Q 007935 425 DFIRNGSLYAALH------------------------------GF--GLNRLLPGTSKVTKN----ETIVTSGTGSRI-- 466 (584)
Q Consensus 425 Ey~~~GsL~~~L~------------------------------~~--g~~~~~~~~~~i~~~----~~~~~~~~~~~~-- 466 (584)
||++. +|.+.+| .. -|+|+++.|+.+..+ +.+++.|.|...
T Consensus 108 dYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~ 186 (438)
T KOG0666|consen 108 DYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGLARLF 186 (438)
T ss_pred hhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccHHHHh
Confidence 99998 7765554 21 368899999988877 777777766322
Q ss_pred ------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCC
Q 007935 467 ------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPE 512 (584)
Q Consensus 467 ------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~ 512 (584)
.+-|.+|.|||.++....||.+.||||.||+..||+|-++-|.+.+
T Consensus 187 ~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E 244 (438)
T KOG0666|consen 187 NNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGRE 244 (438)
T ss_pred hccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchh
Confidence 3568899999998888899999999999999999999888887643
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.4e-23 Score=200.11 Aligned_cols=210 Identities=21% Similarity=0.257 Sum_probs=149.9
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcch------hhHhHHHHHHHHHhcCCCceeeeeEEEE-eCCce
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATW------RFKDFESEVEAIARVQHPNIVRLKAFYY-ANDEK 420 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~------~~~~f~~Ei~~l~~l~HpnIV~l~g~~~-~~~~~ 420 (584)
++||+|||+.||||...... +.||||+-.....+. ..+...||..|.+.|+||.||++|+|+. +.+.+
T Consensus 469 hLLGrGGFSEVyKAFDl~Eq-----RYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsF 543 (775)
T KOG1151|consen 469 HLLGRGGFSEVYKAFDLTEQ-----RYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSF 543 (775)
T ss_pred HHhccccHHHHHHhcccchh-----heeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccc
Confidence 58999999999999987665 789999865443222 2345679999999999999999999996 56678
Q ss_pred eEeeecccCCcHHHHHhcc-----------------------------cccccCCCCcccccc---CeEEecCCCc----
Q 007935 421 LLISDFIRNGSLYAALHGF-----------------------------GLNRLLPGTSKVTKN---ETIVTSGTGS---- 464 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~~L~~~-----------------------------g~~~~~~~~~~i~~~---~~~~~~~~~~---- 464 (584)
+-|+|||+|.+|.-||... .|-+++++|+.+... +.+++.+||.
T Consensus 544 CTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIM 623 (775)
T KOG1151|consen 544 CTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIM 623 (775)
T ss_pred eeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhhc
Confidence 9999999999998888632 356677777654443 4555555542
Q ss_pred --------------ccccCCCcccCccccccC---CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHH-HHHHHHh
Q 007935 465 --------------RISAISNVYLAPEARIYG---SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLE-SLVRKAF 526 (584)
Q Consensus 465 --------------~~~~gt~~y~aPE~~~~~---~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~-~~~~~~~ 526 (584)
+..+||.+|++||.+.-+ .+.+.|+||||.||++|..+.|+.||.........+. ..+....
T Consensus 624 dddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAt 703 (775)
T KOG1151|consen 624 DDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKAT 703 (775)
T ss_pred cCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhcce
Confidence 235799999999998655 4578999999999999999999999975322211111 1111222
Q ss_pred hcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHH
Q 007935 527 RERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVS 575 (584)
Q Consensus 527 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~ 575 (584)
.-..+....++++...+ +.+|+++--++|....++.
T Consensus 704 EVqFP~KPvVsseAkaF-------------IRRCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 704 EVQFPPKPVVSSEAKAF-------------IRRCLAYRKEDRIDVQQLA 739 (775)
T ss_pred eccCCCCCccCHHHHHH-------------HHHHHHhhhhhhhhHHHHc
Confidence 22233345666666554 4448887777777666654
|
|
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.87 E-value=9.1e-22 Score=216.55 Aligned_cols=85 Identities=19% Similarity=0.258 Sum_probs=73.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|.....+ +.||||+++... .....+.+.+|+.+++.++|||||++++++...+..|+||
T Consensus 9 ~~~LG~G~fg~Vy~a~~~~~~-----~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 9 VKPISRGAFGKVYLGRKKNNS-----KLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred EEEEecCCCeEEEEEEECCCC-----cEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 357999999999999998655 799999997642 2223467899999999999999999999999999999999
Q ss_pred ecccCCcHHHHH
Q 007935 425 DFIRNGSLYAAL 436 (584)
Q Consensus 425 Ey~~~GsL~~~L 436 (584)
||+++|+|.+++
T Consensus 84 Ey~~g~~L~~li 95 (669)
T cd05610 84 EYLIGGDVKSLL 95 (669)
T ss_pred eCCCCCCHHHHH
Confidence 999999996655
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.4e-22 Score=192.88 Aligned_cols=188 Identities=20% Similarity=0.248 Sum_probs=135.0
Q ss_pred ecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeecccCCcH
Q 007935 353 SKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432 (584)
Q Consensus 353 G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~GsL 432 (584)
|.+|.||+++...++ +.||+|+++... .+.+|...+....||||+++++++.+.+..++||||+++|+|
T Consensus 4 g~~~~v~~~~~~~~~-----~~~~~K~i~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 72 (237)
T cd05576 4 GVIDKVLLVMDTRTQ-----QTFILKGLRKSS------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKL 72 (237)
T ss_pred cccceEEEEEEccCC-----cEEEEEeecchh------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCH
Confidence 889999999998776 899999997642 344566666667899999999999999999999999999999
Q ss_pred HHHHh-------------------------ccc--ccccCCCCccccccCeEEecCCCcc--------cccCCCcccCcc
Q 007935 433 YAALH-------------------------GFG--LNRLLPGTSKVTKNETIVTSGTGSR--------ISAISNVYLAPE 477 (584)
Q Consensus 433 ~~~L~-------------------------~~g--~~~~~~~~~~i~~~~~~~~~~~~~~--------~~~gt~~y~aPE 477 (584)
.+++. +.| |+++.+.|+.+..++.....+++.. ...++..|+|||
T Consensus 73 ~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE 152 (237)
T cd05576 73 WSHISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPE 152 (237)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCCc
Confidence 76653 333 4666677766666665665555421 234566799999
Q ss_pred ccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHH
Q 007935 478 ARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIA 557 (584)
Q Consensus 478 ~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~ 557 (584)
... +..++.++||||+||++|||++|+.|+........ ......++..+++ .+.+++
T Consensus 153 ~~~-~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~---------~~~~~~~~~~~~~-------------~~~~li 209 (237)
T cd05576 153 VGG-ISEETEACDWWSLGAILFELLTGKTLVECHPSGIN---------THTTLNIPEWVSE-------------EARSLL 209 (237)
T ss_pred ccC-CCCCCchhhHHHHHHHHHHHHHCcchhhcCchhcc---------cccccCCcccCCH-------------HHHHHH
Confidence 854 45789999999999999999999988753211100 0000112222333 344577
Q ss_pred hcccCCCCCCCCChHHH
Q 007935 558 LNCTELDPEFRPRMRTV 574 (584)
Q Consensus 558 ~~Cl~~~P~~RPt~~ev 574 (584)
.+|++.||++||++.+.
T Consensus 210 ~~~l~~dp~~R~~~~~~ 226 (237)
T cd05576 210 QQLLQFNPTERLGAGVA 226 (237)
T ss_pred HHHccCCHHHhcCCCcc
Confidence 77999999999997433
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.7e-21 Score=186.72 Aligned_cols=203 Identities=22% Similarity=0.339 Sum_probs=146.1
Q ss_pred cCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeecccCCcHH
Q 007935 354 KNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLY 433 (584)
Q Consensus 354 ~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~GsL~ 433 (584)
+||.||+|.....+ +.||+|++.........+.|.+|++.+++++|+||+++++++......+++|||+++++|.
T Consensus 1 ~~g~v~~~~~~~~~-----~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~ 75 (244)
T smart00220 1 SFGKVYLARDKKTG-----KLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLF 75 (244)
T ss_pred CceEEEEEEECCCC-----cEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHH
Confidence 58999999998754 7999999987543322588999999999999999999999999999999999999999998
Q ss_pred HHHhcc---------------------------cccccCCCCccccccCeEEecCCCcc----------cccCCCcccCc
Q 007935 434 AALHGF---------------------------GLNRLLPGTSKVTKNETIVTSGTGSR----------ISAISNVYLAP 476 (584)
Q Consensus 434 ~~L~~~---------------------------g~~~~~~~~~~i~~~~~~~~~~~~~~----------~~~gt~~y~aP 476 (584)
+++... -|.++.+.++.+..++..+..+++.. ...++..|++|
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~p 155 (244)
T smart00220 76 DLLKKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAP 155 (244)
T ss_pred HHHHhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCH
Confidence 776431 23344444544555555555555432 23567789999
Q ss_pred cccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHH
Q 007935 477 EARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHI 556 (584)
Q Consensus 477 E~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l 556 (584)
|... +..++.++||||||++++|+++|..||.... ................... ... ...++.++
T Consensus 156 E~~~-~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~----~~~~~~~~~~~~~~~~~~~-~~~---------~~~~~~~~ 220 (244)
T smart00220 156 EVLL-GKGYGKAVDVWSLGVILYELLTGKPPFPGDD----QLLELFKKIGKPKPPFPPP-EWK---------ISPEAKDL 220 (244)
T ss_pred HHHc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCCC----cHHHHHHHHhccCCCCccc-ccc---------CCHHHHHH
Confidence 9855 4678999999999999999999999986421 2222222222221111110 000 11245668
Q ss_pred HhcccCCCCCCCCChHHHHH
Q 007935 557 ALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 557 ~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+.+|+..+|++||++.++++
T Consensus 221 i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 221 IRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHHccCCchhccCHHHHhh
Confidence 88899999999999999986
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.8e-21 Score=168.68 Aligned_cols=159 Identities=20% Similarity=0.281 Sum_probs=133.6
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
....||+|++|.|-+-++...+ +..|||+++..-..+..++.++|+.+..+- ..|.+|.++|.+......++.|
T Consensus 50 ~i~elGrGayG~vekmrh~~sg-----~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcM 124 (282)
T KOG0984|consen 50 GIEELGRGAYGVVEKMRHIQSG-----TIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICM 124 (282)
T ss_pred hhhhhcCCccchhhheeeccCC-----eEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeH
Confidence 4567999999999999988776 899999999876566668899999886655 8999999999999999999999
Q ss_pred ecccCCcHH-----------------------------HHHhcc---cccccCCCCccccccCeEEecCCCccc------
Q 007935 425 DFIRNGSLY-----------------------------AALHGF---GLNRLLPGTSKVTKNETIVTSGTGSRI------ 466 (584)
Q Consensus 425 Ey~~~GsL~-----------------------------~~L~~~---g~~~~~~~~~~i~~~~~~~~~~~~~~~------ 466 (584)
|.|+- ||. .|||+. .|+|.++.|+.|..++.++..|||.+.
T Consensus 125 E~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSi 203 (282)
T KOG0984|consen 125 ELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSI 203 (282)
T ss_pred HHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhhh
Confidence 99974 553 333432 689999999999999999999998542
Q ss_pred ----ccCCCcccCccccccC---CCCCCccchhhHHHHHHHHHhCCCCCCC
Q 007935 467 ----SAISNVYLAPEARIYG---SKFTQKCDVYSFGIVLLEILTGRLPDAG 510 (584)
Q Consensus 467 ----~~gt~~y~aPE~~~~~---~~~~~ksDV~SfGvvl~ElltG~~p~~~ 510 (584)
..|...|||||.+..+ ..|+-||||||+|+.+.||.+++.||+.
T Consensus 204 Akt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~ 254 (282)
T KOG0984|consen 204 AKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYES 254 (282)
T ss_pred HHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccc
Confidence 4688889999975322 3688999999999999999999999975
|
|
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.1e-22 Score=184.08 Aligned_cols=209 Identities=21% Similarity=0.290 Sum_probs=150.4
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEe----CCce
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYA----NDEK 420 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~----~~~~ 420 (584)
+..+||-|-.|.|..+..+.++ ..+|+|.+... ...++|+++.-.. .|||||+++++|.. ....
T Consensus 66 s~qvLG~GinGkV~~C~~k~T~-----ekfALKvL~Ds------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcL 134 (400)
T KOG0604|consen 66 SWQVLGAGINGKVVQCVHKRTQ-----EKFALKVLLDS------PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCL 134 (400)
T ss_pred hhhhhccccCCceEEEEeccch-----hhhHHHHHhcC------HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceee
Confidence 3468999999999999999887 78999999763 4457899986666 79999999999865 3467
Q ss_pred eEeeecccCCcHHHHHhc---------------------------c--cccccCCCCccccc---cCeEEecCCCcc---
Q 007935 421 LLISDFIRNGSLYAALHG---------------------------F--GLNRLLPGTSKVTK---NETIVTSGTGSR--- 465 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~~L~~---------------------------~--g~~~~~~~~~~i~~---~~~~~~~~~~~~--- 465 (584)
++|||.|+||.|+..+.+ . .|+|++++|..... +..++..|||..
T Consensus 135 LiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t 214 (400)
T KOG0604|consen 135 LIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKET 214 (400)
T ss_pred EeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEeccccccccc
Confidence 899999999999755543 2 46777887765432 345556666532
Q ss_pred -------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccCh
Q 007935 466 -------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDP 538 (584)
Q Consensus 466 -------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~ 538 (584)
..+.|+.|.|||++-. .+|+..+|+||+||++|-|+.|-+||........ -..+-+++......+ -+|
T Consensus 215 ~~~~~L~TPc~TPyYvaPevlg~-eKydkscdmwSlgVimYIlLCGyPPFYS~hg~ai-spgMk~rI~~gqy~F---P~p 289 (400)
T KOG0604|consen 215 QEPGDLMTPCFTPYYVAPEVLGP-EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-SPGMKRRIRTGQYEF---PEP 289 (400)
T ss_pred CCCccccCCcccccccCHHHhCc-hhcCCCCCccchhHHHHHhhcCCCcccccCCccC-ChhHHhHhhccCccC---CCh
Confidence 2467999999999544 6899999999999999999999999986544211 112222222222222 223
Q ss_pred hhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 539 ALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 539 ~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
++.. -.+...+++...|..+|.+|.|+.|++.
T Consensus 290 EWs~------VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 290 EWSC------VSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred hHhH------HHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 3211 1224456777789999999999999874
|
|
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.1e-21 Score=168.04 Aligned_cols=159 Identities=19% Similarity=0.294 Sum_probs=128.6
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcch-hhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATW-RFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~-~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
+.||+|.||+||||+..++. ..||+|+++..+..+ ......|||-+++.++|+|||++++....+...-+|+||
T Consensus 8 ekigegtygtvfkarn~~t~-----eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 8 EKIGEGTYGTVFKARNRETH-----EIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred HhhcCCcceeeEecccCCcc-----ceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 46999999999999988876 899999998764332 346789999999999999999999999999999999999
Q ss_pred ccCCcHHHHH--------------------hcc--------cccccCCCCccccccCeEEecCCCcccc-----------
Q 007935 427 IRNGSLYAAL--------------------HGF--------GLNRLLPGTSKVTKNETIVTSGTGSRIS----------- 467 (584)
Q Consensus 427 ~~~GsL~~~L--------------------~~~--------g~~~~~~~~~~i~~~~~~~~~~~~~~~~----------- 467 (584)
|.. +|..|. ++. -|+++++.|..|..++..+..+||....
T Consensus 83 cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgipvrcysae 161 (292)
T KOG0662|consen 83 CDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAE 161 (292)
T ss_pred hhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCceEeeece
Confidence 964 443332 211 2578888888888888888888875432
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCC
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPE 512 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~ 512 (584)
+-|.+|.+|.++....-|++..|+||-||++.|+.. |++-|.+.+
T Consensus 162 vvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~d 207 (292)
T KOG0662|consen 162 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND 207 (292)
T ss_pred eeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCc
Confidence 457789999997776779999999999999999987 666576543
|
|
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.6e-22 Score=196.88 Aligned_cols=158 Identities=20% Similarity=0.293 Sum_probs=128.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
++++|+|.||+||-|+++++| +.||||.+.+-. .........+|+.||.+++||.||.+...|++.+..++|||
T Consensus 569 devLGSGQFG~VYgg~hRktG-----rdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVME 643 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTG-----RDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVME 643 (888)
T ss_pred HhhccCCcceeeecceecccC-----ceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEeh
Confidence 589999999999999999987 999999998752 22333778999999999999999999999999999999999
Q ss_pred cccCCcH--------------------------HHHHhcc--cccccCCCCcccccc---CeEEecCCCcc---------
Q 007935 426 FIRNGSL--------------------------YAALHGF--GLNRLLPGTSKVTKN---ETIVTSGTGSR--------- 465 (584)
Q Consensus 426 y~~~GsL--------------------------~~~L~~~--g~~~~~~~~~~i~~~---~~~~~~~~~~~--------- 465 (584)
-+.|.-| ..|||.. .|+|++++|+.+... -.++..+||..
T Consensus 644 Kl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFR 723 (888)
T KOG4236|consen 644 KLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFR 723 (888)
T ss_pred hhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhhh
Confidence 9955333 2334433 467888888765443 34555666532
Q ss_pred -cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCC
Q 007935 466 -ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAG 510 (584)
Q Consensus 466 -~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~ 510 (584)
..+||+.|+|||++.. +.|...-|+||.||++|.-++|..||..
T Consensus 724 rsVVGTPAYLaPEVLrn-kGyNrSLDMWSVGVIiYVsLSGTFPFNE 768 (888)
T KOG4236|consen 724 RSVVGTPAYLAPEVLRN-KGYNRSLDMWSVGVIIYVSLSGTFPFNE 768 (888)
T ss_pred hhhcCCccccCHHHHhh-ccccccccceeeeEEEEEEecccccCCC
Confidence 3589999999999655 7899999999999999999999999974
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.6e-20 Score=203.87 Aligned_cols=134 Identities=34% Similarity=0.577 Sum_probs=76.3
Q ss_pred CCchHHHHHHHHHHHhcccCCCCCCCCCCCCCCC-C--CcceeeEecCC------CEEEEEcCCCCCcccCCccccCCCC
Q 007935 20 FSLNQDGLALLALKAAIAQDPTRALDSWSESDST-P--CHWSGIHCIRN------RVTSLYLPNRNLTGYMPSELGLLNS 90 (584)
Q Consensus 20 ~~~~~~~~~l~~~~~~~~~~~~~~l~~w~~~~~~-~--c~w~gv~c~~~------~v~~l~l~~~~l~~~~~~~~~~l~~ 90 (584)
....+|..||+.+|..+. ++. ..+|.. ++| | |.|.||.|... .|+.|+|++|+++|.+|..++.|++
T Consensus 368 ~t~~~~~~aL~~~k~~~~-~~~--~~~W~g-~~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~~L~~ 443 (623)
T PLN03150 368 KTLLEEVSALQTLKSSLG-LPL--RFGWNG-DPCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKLRH 443 (623)
T ss_pred ccCchHHHHHHHHHHhcC-Ccc--cCCCCC-CCCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHHHhCCCC
Confidence 345678999999999995 332 248964 333 1 37999999531 2555555555555555555555555
Q ss_pred CCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHh
Q 007935 91 LTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFL 157 (584)
Q Consensus 91 L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~ 157 (584)
|+.|+|++|+|+|.+|..+..+++|+.|+|++|+++|.+|..+++|++|+.|+|++|+|+|.+|..+
T Consensus 444 L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l 510 (623)
T PLN03150 444 LQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAAL 510 (623)
T ss_pred CCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHH
Confidence 5555555555555555555555555555555555554444444444444444444444444444433
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.6e-21 Score=194.77 Aligned_cols=162 Identities=23% Similarity=0.355 Sum_probs=136.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc--chhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA--TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~--~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||-|+||.|..+...++. ..+|.|.+++.+. ..+......|-.||+..+.+-||+|+-.|.+++..|+||
T Consensus 634 ik~iGvGAFGeV~Lv~KvDT~-----~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM 708 (1034)
T KOG0608|consen 634 IKTIGVGAFGEVCLVRKVDTR-----ALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 708 (1034)
T ss_pred EeeecccccceeEEEeecchh-----hHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence 468999999999999988875 7899999987632 223355678999999999999999999999999999999
Q ss_pred ecccCCcHHHHH-------------------------h--cccccccCCCCccccccCeEEecCCCccc-----------
Q 007935 425 DFIRNGSLYAAL-------------------------H--GFGLNRLLPGTSKVTKNETIVTSGTGSRI----------- 466 (584)
Q Consensus 425 Ey~~~GsL~~~L-------------------------~--~~g~~~~~~~~~~i~~~~~~~~~~~~~~~----------- 466 (584)
||++||++...| | +|.|+|++++|++|+.|++++..|||...
T Consensus 709 dYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYY 788 (1034)
T KOG0608|consen 709 DYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY 788 (1034)
T ss_pred eccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceeccccccc
Confidence 999999986544 2 35689999999999999999987765110
Q ss_pred ------------------------------------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhC
Q 007935 467 ------------------------------------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTG 504 (584)
Q Consensus 467 ------------------------------------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG 504 (584)
.+||+.|+|||++.. ..|+.-+|.||.|||||||+.|
T Consensus 789 q~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r-~g~~q~cdwws~gvil~em~~g 867 (1034)
T KOG0608|consen 789 QEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLAR-TGYTQLCDWWSVGVILYEMLVG 867 (1034)
T ss_pred cCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcc-cCccccchhhHhhHHHHHHhhC
Confidence 268999999999776 6799999999999999999999
Q ss_pred CCCCCCCCCC
Q 007935 505 RLPDAGPEND 514 (584)
Q Consensus 505 ~~p~~~~~~~ 514 (584)
+.||-.....
T Consensus 868 ~~pf~~~tp~ 877 (1034)
T KOG0608|consen 868 QPPFLADTPG 877 (1034)
T ss_pred CCCccCCCCC
Confidence 9999865443
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.7e-20 Score=194.87 Aligned_cols=164 Identities=17% Similarity=0.233 Sum_probs=111.3
Q ss_pred ceeceeecCceEEEEEecCCCC-----------CCCceEEEEEEecCCCcch-------------hhHhHHHHHHHHHhc
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSG-----------MGAPTVVAVRRLTEGDATW-------------RFKDFESEVEAIARV 402 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~-----------~~~~~~vAvK~l~~~~~~~-------------~~~~f~~Ei~~l~~l 402 (584)
.++||+|+||+||+|.....+. ....+.||||++....... ..+.+..|+.++.++
T Consensus 150 ~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~~l~~l 229 (507)
T PLN03224 150 RDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAYMCAKI 229 (507)
T ss_pred eeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHHHHHHh
Confidence 5789999999999997633221 1122679999987532111 112344577888888
Q ss_pred CCCce-----eeeeEEEEe--------CCceeEeeecccCCcHHHHHhcc------------------------------
Q 007935 403 QHPNI-----VRLKAFYYA--------NDEKLLISDFIRNGSLYAALHGF------------------------------ 439 (584)
Q Consensus 403 ~HpnI-----V~l~g~~~~--------~~~~~lV~Ey~~~GsL~~~L~~~------------------------------ 439 (584)
+|.++ ++++++|.. .+..+|||||+++|+|.++|++.
T Consensus 230 ~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~ 309 (507)
T PLN03224 230 KRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDIN 309 (507)
T ss_pred hcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHH
Confidence 77655 778888764 35689999999999998887631
Q ss_pred ---------------------cccccCCCCccccccCeEEecCCCccc------------ccCCCcccCccccccCCC--
Q 007935 440 ---------------------GLNRLLPGTSKVTKNETIVTSGTGSRI------------SAISNVYLAPEARIYGSK-- 484 (584)
Q Consensus 440 ---------------------g~~~~~~~~~~i~~~~~~~~~~~~~~~------------~~gt~~y~aPE~~~~~~~-- 484 (584)
-|+++++.|+.+..+...+..++|... ..+|+.|+|||.+.....
T Consensus 310 ~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~~~~~ 389 (507)
T PLN03224 310 VIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVMPQSCP 389 (507)
T ss_pred HHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhcCCCCCC
Confidence 245566666666555666666665331 134788999998543211
Q ss_pred -------------------CCCccchhhHHHHHHHHHhCCC-CCCC
Q 007935 485 -------------------FTQKCDVYSFGIVLLEILTGRL-PDAG 510 (584)
Q Consensus 485 -------------------~~~ksDV~SfGvvl~ElltG~~-p~~~ 510 (584)
...+.||||+||++|||++|.. ||..
T Consensus 390 ~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~ 435 (507)
T PLN03224 390 RAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVAN 435 (507)
T ss_pred ccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccc
Confidence 1235799999999999999875 6653
|
|
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.82 E-value=4e-21 Score=183.63 Aligned_cols=218 Identities=19% Similarity=0.256 Sum_probs=153.2
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCC--C----ceeeeeEEEEeCCcee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQH--P----NIVRLKAFYYANDEKL 421 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~H--p----nIV~l~g~~~~~~~~~ 421 (584)
..+|+|.||.|-++.....+ ..||||+++.. ...++.-+-|++++.++.+ | -+|++.+||.-.++.+
T Consensus 95 ~~lGeGtFGkV~ec~D~~~~-----~~vAlKIik~V--~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiC 167 (415)
T KOG0671|consen 95 DLLGEGTFGKVVECWDRETK-----EHVALKIIKNV--DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHIC 167 (415)
T ss_pred hhhcCCcccceEEEeecCCC-----ceehHHHHHHH--HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceE
Confidence 35999999999999987764 89999999864 2333667789999999932 3 3888999999999999
Q ss_pred EeeecccCCcHHHHHhc---------------------------c--cccccCCCCccccc-------------------
Q 007935 422 LISDFIRNGSLYAALHG---------------------------F--GLNRLLPGTSKVTK------------------- 453 (584)
Q Consensus 422 lV~Ey~~~GsL~~~L~~---------------------------~--g~~~~~~~~~~i~~------------------- 453 (584)
+|+|.+ |-|++++|.. . -|-|++++|+.+..
T Consensus 168 ivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ 246 (415)
T KOG0671|consen 168 IVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPL 246 (415)
T ss_pred EEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccceeccC
Confidence 999988 3477777654 2 35677887764322
Q ss_pred -cCeEEecCCCccc--------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Q 007935 454 -NETIVTSGTGSRI--------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRK 524 (584)
Q Consensus 454 -~~~~~~~~~~~~~--------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~ 524 (584)
...+...|||++. .+.|..|.|||+++. -..+.++||||+||||.|+.||..-|...++.+ .+ .+++.
T Consensus 247 ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLg-LGwS~pCDvWSiGCIL~ElytG~~LFqtHen~E-HL-aMMer 323 (415)
T KOG0671|consen 247 KSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILG-LGWSQPCDVWSIGCILVELYTGETLFQTHENLE-HL-AMMER 323 (415)
T ss_pred CCcceEEEecCCcceeccCcceeeeccccCCchheec-cCcCCccCceeeeeEEEEeeccceecccCCcHH-HH-HHHHH
Confidence 2234446676543 367899999999665 789999999999999999999999998644211 11 23333
Q ss_pred HhhcCCC------------------CccccChh-----------h-hhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHH
Q 007935 525 AFRERRP------------------LSEVIDPA-----------L-VKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 574 (584)
Q Consensus 525 ~~~~~~~------------------~~~~~d~~-----------~-~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev 574 (584)
++...+. .++..... + .-......+..++++|+.+++..||.+|+|++|+
T Consensus 324 IlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EA 403 (415)
T KOG0671|consen 324 ILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREA 403 (415)
T ss_pred hhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHH
Confidence 3221100 00000000 0 0001123456789999999999999999999999
Q ss_pred HH
Q 007935 575 SE 576 (584)
Q Consensus 575 ~~ 576 (584)
++
T Consensus 404 L~ 405 (415)
T KOG0671|consen 404 LS 405 (415)
T ss_pred hc
Confidence 85
|
|
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.82 E-value=7.5e-22 Score=177.97 Aligned_cols=221 Identities=16% Similarity=0.180 Sum_probs=154.9
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC--------C
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN--------D 418 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~--------~ 418 (584)
..||+|.||.||+|+.++++ +.||+|+.--.. ....-..-++|+++|..++|+|++.+++.|... .
T Consensus 23 ~kigqGtfgeVFkAr~~n~~-----kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~ 97 (376)
T KOG0669|consen 23 AKIGQGTFGEVFKARSKNTG-----KKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRA 97 (376)
T ss_pred HhcCCchHHHHHHHhhcCcc-----chhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccc
Confidence 46999999999999999887 789998764421 111225568999999999999999999988652 3
Q ss_pred ceeEeeecccCCcHH--------------------------HHHhcc--cccccCCCCccccccCeEEecCCCccc----
Q 007935 419 EKLLISDFIRNGSLY--------------------------AALHGF--GLNRLLPGTSKVTKNETIVTSGTGSRI---- 466 (584)
Q Consensus 419 ~~~lV~Ey~~~GsL~--------------------------~~L~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~---- 466 (584)
..|+|+++|+. +|. .|+|+. -|++.++.|..|..++.++..+||...
T Consensus 98 t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~fs~ 176 (376)
T KOG0669|consen 98 TFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARAFST 176 (376)
T ss_pred eeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccccceec
Confidence 48999999987 553 334432 478899999999999999998887542
Q ss_pred -----------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcC--CCCc
Q 007935 467 -----------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER--RPLS 533 (584)
Q Consensus 467 -----------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~--~~~~ 533 (584)
.+-|..|.+||.+.....|+++.|||.-||++.||.||.+-+.+.... .-...++...... ..++
T Consensus 177 ~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteq--qql~~Is~LcGs~tkevWP 254 (376)
T KOG0669|consen 177 SKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQ--QQLHLISQLCGSITKEVWP 254 (376)
T ss_pred ccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHH--HHHHHHHHHhccCCcccCC
Confidence 123788999999888889999999999999999999999887753221 1112222222110 0011
Q ss_pred cccChhhhhhh----------h-HHHHHH------HHHHHHhcccCCCCCCCCChHHHHH
Q 007935 534 EVIDPALVKEI----------H-AKRQVL------ATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 534 ~~~d~~~~~~~----------~-~~~~~~------~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+..-.+...+ . -.+.+. ..++++...+..||.+|+++.+++.
T Consensus 255 ~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~aln 314 (376)
T KOG0669|consen 255 NVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALN 314 (376)
T ss_pred CcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhc
Confidence 11111111111 0 011122 5677888899999999999999875
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.1e-20 Score=198.44 Aligned_cols=219 Identities=15% Similarity=0.173 Sum_probs=130.2
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEE------EEeCCc
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAF------YYANDE 419 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~------~~~~~~ 419 (584)
..+.||+|+||.||+|++..+.. .....||||++...... +.+..| .+.+..|.+++.++.. +.++++
T Consensus 136 l~~~LG~G~FG~VYka~~~~~~~-~~~~~vAvK~~~~~~~~---e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (566)
T PLN03225 136 LGKKLGEGAFGVVYKASLVNKQS-KKEGKYVLKKATEYGAV---EIWMNE--RVRRACPNSCADFVYGFLEPVSSKKEDE 209 (566)
T ss_pred EeEEEeeCCCeEEEEEEEcCCcc-ccCcEEEEEEecccchh---HHHHHH--HHHhhchhhHHHHHHhhhcccccccCCc
Confidence 35789999999999999977611 11278999998653211 222222 1222233333333222 245668
Q ss_pred eeEeeecccCCcHHHHHh---------------------------------------------cc--cccccCCCCcccc
Q 007935 420 KLLISDFIRNGSLYAALH---------------------------------------------GF--GLNRLLPGTSKVT 452 (584)
Q Consensus 420 ~~lV~Ey~~~GsL~~~L~---------------------------------------------~~--g~~~~~~~~~~i~ 452 (584)
.++||||+++|+|.++++ +. -|+|+++.|+.+.
T Consensus 210 ~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NILl~ 289 (566)
T PLN03225 210 YWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNIIFS 289 (566)
T ss_pred eEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEEEe
Confidence 999999999999866553 22 3577777787776
Q ss_pred c-cCeEEecCCCccc------------ccCCCcccCccccccC---------------------CCCCCccchhhHHHHH
Q 007935 453 K-NETIVTSGTGSRI------------SAISNVYLAPEARIYG---------------------SKFTQKCDVYSFGIVL 498 (584)
Q Consensus 453 ~-~~~~~~~~~~~~~------------~~gt~~y~aPE~~~~~---------------------~~~~~ksDV~SfGvvl 498 (584)
. +..++..|||... ..+|+.|||||.+... ..++.++|||||||++
T Consensus 290 ~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL 369 (566)
T PLN03225 290 EGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIF 369 (566)
T ss_pred CCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHHHHH
Confidence 4 3567777776532 3578899999964321 1245577999999999
Q ss_pred HHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC-------CccccChhhhhhhhHH-HHHHHHHHHHhcccCCCCCCCCC
Q 007935 499 LEILTGRLPDAGPENDGKGLESLVRKAFRERRP-------LSEVIDPALVKEIHAK-RQVLATFHIALNCTELDPEFRPR 570 (584)
Q Consensus 499 ~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~-------~~~~~d~~~~~~~~~~-~~~~~~~~l~~~Cl~~~P~~RPt 570 (584)
|||+++..|++. .+..+.+........ ......+++....... .......+|+.+|++.||++|||
T Consensus 370 ~el~~~~~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~t 443 (566)
T PLN03225 370 LQMAFPNLRSDS------NLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRIS 443 (566)
T ss_pred HHHHhCcCCCch------HHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCC
Confidence 999998766542 111111111110000 0000111111100000 01123457899999999999999
Q ss_pred hHHHHH
Q 007935 571 MRTVSE 576 (584)
Q Consensus 571 ~~ev~~ 576 (584)
+.|+++
T Consensus 444 a~e~L~ 449 (566)
T PLN03225 444 AKAALA 449 (566)
T ss_pred HHHHhC
Confidence 999985
|
|
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.82 E-value=4e-21 Score=189.01 Aligned_cols=168 Identities=23% Similarity=0.284 Sum_probs=137.4
Q ss_pred cchhhHhhhcceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC--CcchhhHhHHHHHHHHHhcCCCceeeeeEEE
Q 007935 337 LELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG--DATWRFKDFESEVEAIARVQHPNIVRLKAFY 414 (584)
Q Consensus 337 ~~~~~l~~~~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~ 414 (584)
..++++.+. ..+|-|+||.|-.++..... ..+|+|.+++. ....+.+....|-.+|...+.|.||++|-.|
T Consensus 417 v~l~dl~~i--aTLGvGgFGRVELV~~~~~~-----~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTf 489 (732)
T KOG0614|consen 417 VKLSDLKRI--ATLGVGGFGRVELVKVNSQK-----ATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTF 489 (732)
T ss_pred cchhhhhhh--hhcccCccceEEEEEecccc-----hHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHh
Confidence 344444432 35999999999999887753 35899999876 2334457788999999999999999999999
Q ss_pred EeCCceeEeeecccCCcH-------------------------HHHHhcccc--cccCCCCccccccCeEEecCCCc---
Q 007935 415 YANDEKLLISDFIRNGSL-------------------------YAALHGFGL--NRLLPGTSKVTKNETIVTSGTGS--- 464 (584)
Q Consensus 415 ~~~~~~~lV~Ey~~~GsL-------------------------~~~L~~~g~--~~~~~~~~~i~~~~~~~~~~~~~--- 464 (584)
.+....|+.||-|-||.| ++|||..|+ ++++++|..+..++-.+..+||.
T Consensus 490 rd~kyvYmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKk 569 (732)
T KOG0614|consen 490 RDSKYVYMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKK 569 (732)
T ss_pred ccchhhhhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHH
Confidence 999999999999999998 477777665 88899888777777777766652
Q ss_pred -------ccccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCC
Q 007935 465 -------RISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPE 512 (584)
Q Consensus 465 -------~~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~ 512 (584)
-+.+||+.|.|||+++. ...+.++|.||+|+++|||+||++||.+.+
T Consensus 570 i~~g~KTwTFcGTpEYVAPEIILn-KGHD~avDyWaLGIli~ELL~G~pPFs~~d 623 (732)
T KOG0614|consen 570 IGSGRKTWTFCGTPEYVAPEIILN-KGHDRAVDYWALGILIYELLTGSPPFSGVD 623 (732)
T ss_pred hccCCceeeecCCcccccchhhhc-cCcchhhHHHHHHHHHHHHHcCCCCCCCCc
Confidence 23589999999999776 578899999999999999999999998643
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.4e-21 Score=193.44 Aligned_cols=210 Identities=20% Similarity=0.263 Sum_probs=157.7
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeecc
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 427 (584)
..+|.|.||.|||++....+ ..+|||.++.... +..+-..+|+-+++..+|||||.++|.|...+..++.||||
T Consensus 21 qrvgsgTygdvyKaRd~~s~-----elaavkvVkLep~-dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEyc 94 (829)
T KOG0576|consen 21 QRVGSGTYGDVYKARDKRSG-----ELAAVKVVKLEPG-DDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYC 94 (829)
T ss_pred eeecCCcccchhhhcccccC-----chhhheeeeccCC-ccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEec
Confidence 46999999999999998877 8999999987533 23467789999999999999999999999999999999999
Q ss_pred cCCcHH-------------------------HHHhccc--ccccCCCCccccccCeEEecCCCcc-----------cccC
Q 007935 428 RNGSLY-------------------------AALHGFG--LNRLLPGTSKVTKNETIVTSGTGSR-----------ISAI 469 (584)
Q Consensus 428 ~~GsL~-------------------------~~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~~g 469 (584)
.+|+|. .|||+.| |++++..|+.+.+.+.+...|||.. ...|
T Consensus 95 gggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqitati~KrksfiG 174 (829)
T KOG0576|consen 95 GGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRKSFIG 174 (829)
T ss_pred CCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhhhhhhhhcccC
Confidence 999993 5666665 7888888888888888888777633 2479
Q ss_pred CCcccCcccccc--CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHH
Q 007935 470 SNVYLAPEARIY--GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAK 547 (584)
Q Consensus 470 t~~y~aPE~~~~--~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 547 (584)
|+.|||||+..- ...|..++|||+.|+...|+---++|..+.. .+......-....++ +..-|+.-.
T Consensus 175 tpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlh----pmr~l~LmTkS~~qp-p~lkDk~kw------ 243 (829)
T KOG0576|consen 175 TPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLH----PMRALFLMTKSGFQP-PTLKDKTKW------ 243 (829)
T ss_pred CccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccc----hHHHHHHhhccCCCC-CcccCCccc------
Confidence 999999998532 2468999999999999999998888854311 122221111111111 222222111
Q ss_pred HHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 548 RQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 548 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
..-+.+++..|+-++|++|||+..+++
T Consensus 244 --s~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 244 --SEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred --hHHHHHHHHHHhcCCCccCCChhhhee
Confidence 123456788899999999999987654
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.81 E-value=7.2e-21 Score=173.43 Aligned_cols=211 Identities=22% Similarity=0.287 Sum_probs=145.5
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCC-CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
..|.+...|..|+|++.+. .+++|++... ......++|..|.-.|+-+.||||..++|.|....+..++..|
T Consensus 196 tkl~e~hsgelwrgrwqgn-------divakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~ 268 (448)
T KOG0195|consen 196 TKLAESHSGELWRGRWQGN-------DIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQY 268 (448)
T ss_pred hhhccCCCcccccccccCc-------chhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeee
Confidence 3577888999999999875 4666777654 2222337899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcc-------------------cccccCC------------CCccccccCeEEe------cCCCcccccC
Q 007935 427 IRNGSLYAALHGF-------------------GLNRLLP------------GTSKVTKNETIVT------SGTGSRISAI 469 (584)
Q Consensus 427 ~~~GsL~~~L~~~-------------------g~~~~~~------------~~~~i~~~~~~~~------~~~~~~~~~g 469 (584)
|+.|+|+..||+. |.+.++. ....|..+-...+ +.|.......
T Consensus 269 mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsfqe~gr~y 348 (448)
T KOG0195|consen 269 MPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQEVGRAY 348 (448)
T ss_pred ccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeeeecccccc
Confidence 9999999999963 2222211 1111222211111 1122223456
Q ss_pred CCcccCccccccCCCC--CCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhc-CCCCccccChhhhhhhhH
Q 007935 470 SNVYLAPEARIYGSKF--TQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE-RRPLSEVIDPALVKEIHA 546 (584)
Q Consensus 470 t~~y~aPE~~~~~~~~--~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~d~~~~~~~~~ 546 (584)
.+.||+||.+...... -.++|+|||.+++|||.|...||.+...-+..+ +-.+.+ +..++..+++.+
T Consensus 349 ~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgm----kialeglrv~ippgis~hm------ 418 (448)
T KOG0195|consen 349 SPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGM----KIALEGLRVHIPPGISRHM------ 418 (448)
T ss_pred CcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhh----hhhhccccccCCCCccHHH------
Confidence 7889999986653222 257999999999999999999998654432222 112221 122333344333
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 547 KRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 547 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.+++.-|++.||.+||.+..|+-.|++++
T Consensus 419 -------~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 419 -------NKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred -------HHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 34666699999999999999999999875
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.79 E-value=6.9e-20 Score=190.79 Aligned_cols=201 Identities=20% Similarity=0.233 Sum_probs=146.0
Q ss_pred cceeceeecCce-EEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEe
Q 007935 346 SAYVVGKSKNGI-MYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLI 423 (584)
Q Consensus 346 ~~~~iG~G~~g~-Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV 423 (584)
..+++|.|+.|+ ||+|...+ +.||||++-.... +...|||..|..- .|||||++++.-.+++..|+.
T Consensus 513 ~~eilG~Gs~Gt~Vf~G~ye~-------R~VAVKrll~e~~----~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIa 581 (903)
T KOG1027|consen 513 PKEILGYGSNGTVVFRGVYEG-------REVAVKRLLEEFF----DFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIA 581 (903)
T ss_pred cHHHcccCCCCcEEEEEeeCC-------ceehHHHHhhHhH----HHHHHHHHHHHhccCCCceEEEEeeccCCceEEEE
Confidence 457899999876 79999876 7999999975322 4567999999988 799999999988889999999
Q ss_pred eecccCCcHHHHHhc-------------------------------ccccccCCCCcccccc-----CeEEecCCCc---
Q 007935 424 SDFIRNGSLYAALHG-------------------------------FGLNRLLPGTSKVTKN-----ETIVTSGTGS--- 464 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~~-------------------------------~g~~~~~~~~~~i~~~-----~~~~~~~~~~--- 464 (584)
.|.|.. +|.+++.. ..|+|+++.|+.|... ...+++|||.
T Consensus 582 lELC~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKk 660 (903)
T KOG1027|consen 582 LELCAC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKK 660 (903)
T ss_pred ehHhhh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccc
Confidence 999975 77766643 1468888899887762 3445566652
Q ss_pred -----------ccccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhC-CCCCCCCCCCCCcHHHHHHHHhhcCCCC
Q 007935 465 -----------RISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTG-RLPDAGPENDGKGLESLVRKAFRERRPL 532 (584)
Q Consensus 465 -----------~~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG-~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 532 (584)
....||.+|+|||++.. ..-+.++||||+|||+|..+|| ..||.+....+.+ +......+
T Consensus 661 l~~~~sS~~r~s~~sGt~GW~APE~L~~-~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~N-------Il~~~~~L 732 (903)
T KOG1027|consen 661 LAGGKSSFSRLSGGSGTSGWQAPEQLRE-DRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQAN-------ILTGNYTL 732 (903)
T ss_pred cCCCcchhhcccCCCCcccccCHHHHhc-cccCcccchhhcCceEEEEecCCccCCCchHHhhhh-------hhcCccce
Confidence 23479999999999655 5667899999999999999995 8999752211111 11111111
Q ss_pred ccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 533 SEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 533 ~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
...- + ..++ +..+++.++++++|..||++.+|+.
T Consensus 733 ~~L~-~-------~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 733 VHLE-P-------LPDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred eeec-c-------CchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 1110 0 0011 4456777899999999999999974
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.5e-19 Score=159.59 Aligned_cols=218 Identities=14% Similarity=0.198 Sum_probs=154.7
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcC-CCceeeeeEEEEeCC--ceeEee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-HPNIVRLKAFYYAND--EKLLIS 424 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~-HpnIV~l~g~~~~~~--~~~lV~ 424 (584)
+.+|+|.|+.||.|...... ..++||.++.... +.+.||++||..++ |||||+|++...+.. ...||+
T Consensus 44 rk~GRGKYSEVFeg~~~~~~-----eK~ViKiLKPVkk----kKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiF 114 (338)
T KOG0668|consen 44 RKVGRGKYSEVFEGINITNN-----EKCVIKILKPVKK----KKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIF 114 (338)
T ss_pred HHHcCccHhhHhcccccCCC-----ceEEEeeechHHH----HHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHh
Confidence 46999999999999876654 7899999986432 78999999999996 999999999998754 467999
Q ss_pred ecccCCcH----------------------HHHHhccc--ccccCCCCccccccCeE-EecCCCc----------ccccC
Q 007935 425 DFIRNGSL----------------------YAALHGFG--LNRLLPGTSKVTKNETI-VTSGTGS----------RISAI 469 (584)
Q Consensus 425 Ey~~~GsL----------------------~~~L~~~g--~~~~~~~~~~i~~~~~~-~~~~~~~----------~~~~g 469 (584)
||+.|-+. .+|.|+.| |++.++.|..|...... ...+.|. ...+.
T Consensus 115 E~v~n~Dfk~ly~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYnVRVA 194 (338)
T KOG0668|consen 115 EYVNNTDFKQLYPTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194 (338)
T ss_pred hhhccccHHHHhhhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcCCCceeeeeee
Confidence 99999875 36667777 57888888877655332 2233332 22355
Q ss_pred CCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhh-------cCCCCccccChhhhh
Q 007935 470 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR-------ERRPLSEVIDPALVK 542 (584)
Q Consensus 470 t~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~-------~~~~~~~~~d~~~~~ 542 (584)
+..|.-||.+..-+.|+..-|+|||||++.+|+..+.||.....+...++.+++-.-. .+. .-.+||...+
T Consensus 195 SRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY--~i~Ldp~~~~ 272 (338)
T KOG0668|consen 195 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKY--QIDLDPQFED 272 (338)
T ss_pred hhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHH--ccCCChhHhh
Confidence 6778999998877889999999999999999999999987544433333333221100 010 1113333222
Q ss_pred h------------hhHH---HHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 543 E------------IHAK---RQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 543 ~------------~~~~---~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
. +... ....+.+++..+.+..|-++|+|+.|.+.
T Consensus 273 i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 273 ILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred HhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 1 1110 11246788888999999999999999874
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.7e-18 Score=161.68 Aligned_cols=174 Identities=22% Similarity=0.383 Sum_probs=136.8
Q ss_pred ceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeecccC
Q 007935 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRN 429 (584)
Q Consensus 350 iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~ 429 (584)
||+|.+|.||++....++ +.+++|+..........+.+.+|++.+++++|++|+++++++......+++|||+++
T Consensus 1 l~~g~~~~v~~~~~~~~~-----~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~ 75 (215)
T cd00180 1 LGEGGFGTVYLARDKKTG-----KKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEG 75 (215)
T ss_pred CCcCCceEEEEEEecCCC-----cEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCC
Confidence 689999999999997644 799999998754332347899999999999999999999999999999999999999
Q ss_pred CcHHHHHhcc----------------------------cccccCCCCccccc-cCeEEecCCCcc-----------cccC
Q 007935 430 GSLYAALHGF----------------------------GLNRLLPGTSKVTK-NETIVTSGTGSR-----------ISAI 469 (584)
Q Consensus 430 GsL~~~L~~~----------------------------g~~~~~~~~~~i~~-~~~~~~~~~~~~-----------~~~g 469 (584)
++|.+++... -|.++.+.|+.+.. +......+++.. ...+
T Consensus 76 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~ 155 (215)
T cd00180 76 GSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVG 155 (215)
T ss_pred CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccC
Confidence 9998776431 23445556655555 455555555422 1346
Q ss_pred CCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHHH
Q 007935 470 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQ 549 (584)
Q Consensus 470 t~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 549 (584)
...|++||.......++.++|+|++|++++|+
T Consensus 156 ~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l------------------------------------------------ 187 (215)
T cd00180 156 TPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL------------------------------------------------ 187 (215)
T ss_pred CCCccChhHhcccCCCCchhhhHHHHHHHHHH------------------------------------------------
Confidence 77899999855422788999999999999999
Q ss_pred HHHHHHHHhcccCCCCCCCCChHHHHHH
Q 007935 550 VLATFHIALNCTELDPEFRPRMRTVSES 577 (584)
Q Consensus 550 ~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 577 (584)
..+.+++..|++.+|++||++.++++.
T Consensus 188 -~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 -PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred -HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 234557777999999999999999864
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.5e-17 Score=158.76 Aligned_cols=159 Identities=24% Similarity=0.414 Sum_probs=122.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|++|.||++...+++ +.+|+|.+.........+.+.+|++.+.+++|+|++++++++...+..++++||
T Consensus 4 ~~~i~~g~~~~v~~~~~~~~~-----~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~ 78 (225)
T smart00221 4 GKKLGEGAFGKVYLARDKGTG-----ELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEY 78 (225)
T ss_pred eeEeecCCCeEEEEEEEcCCC-----cEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEec
Confidence 457999999999999998754 789999998754332457899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcc--------------------------c--ccccCCCCccccccCeEEecCCCc------------cc
Q 007935 427 IRNGSLYAALHGF--------------------------G--LNRLLPGTSKVTKNETIVTSGTGS------------RI 466 (584)
Q Consensus 427 ~~~GsL~~~L~~~--------------------------g--~~~~~~~~~~i~~~~~~~~~~~~~------------~~ 466 (584)
+++++|.++++.. + |.++.+.+..+..+..++..+++. ..
T Consensus 79 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~ 158 (225)
T smart00221 79 CEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKT 158 (225)
T ss_pred cCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccccc
Confidence 9999998877542 1 223333333344434444444432 22
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCC
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAG 510 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~ 510 (584)
..++..|++||.......++.++|||+||++++||++|+.||..
T Consensus 159 ~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 159 VKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred eeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 35667799999853446788899999999999999999999964
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.4e-18 Score=173.77 Aligned_cols=158 Identities=19% Similarity=0.235 Sum_probs=126.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC----cc---hhhHhHHHHHHHHHhcC---CCceeeeeEEEEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD----AT---WRFKDFESEVEAIARVQ---HPNIVRLKAFYYA 416 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~----~~---~~~~~f~~Ei~~l~~l~---HpnIV~l~g~~~~ 416 (584)
-..+|+|+||.|+.|.++... ..|+||.+.+.. .+ ...-..--||+||+.++ |+||++++++|++
T Consensus 566 lq~lG~GAyGkV~lai~K~n~-----~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 566 LQPLGEGAYGKVNLAIHKENN-----YEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred eeeccccccceEEEeeecccc-----eEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 468999999999999998875 899999998751 11 11123567999999997 9999999999999
Q ss_pred CCceeEeeecc-cCCcHHHHH-------------------------hccc--ccccCCCCccccccCeEEecCCCccc--
Q 007935 417 NDEKLLISDFI-RNGSLYAAL-------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSRI-- 466 (584)
Q Consensus 417 ~~~~~lV~Ey~-~~GsL~~~L-------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~-- 466 (584)
++..||+||-- ++-+|++++ |++| |++++++|..+..++.++..+||+..
T Consensus 641 dd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsaa~~ 720 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSAAYT 720 (772)
T ss_pred CCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccchhhh
Confidence 99999999964 455777665 4444 57888888877777888888887653
Q ss_pred -------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCC
Q 007935 467 -------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDA 509 (584)
Q Consensus 467 -------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~ 509 (584)
..||..|.|||++-........-|||++|++||.++....||.
T Consensus 721 ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 721 KSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred cCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 4799999999995443334677899999999999999999986
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.73 E-value=6e-18 Score=164.25 Aligned_cols=225 Identities=20% Similarity=0.268 Sum_probs=153.1
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|.|++||++.+... ......||+|.+...... .+..+|+++|..+ .|.||+++.+++..+++..+|+|
T Consensus 41 v~kigeGsFssv~~a~~~~~--~~~~~~valk~i~~ts~p---~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp 115 (418)
T KOG1167|consen 41 VNKIGEGSFSSVYKATDIEQ--DTKRRYVALKAIYRTSSP---SRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLP 115 (418)
T ss_pred hccccccchhhhhhhhHhhh--ccccceEeeeecccccCc---hHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEec
Confidence 47899999999999998772 112289999999876554 6789999999999 69999999999999999999999
Q ss_pred cccCCcHHHHH----------------------hccc--ccccCCCCcccc--------cc----------------Ce-
Q 007935 426 FIRNGSLYAAL----------------------HGFG--LNRLLPGTSKVT--------KN----------------ET- 456 (584)
Q Consensus 426 y~~~GsL~~~L----------------------~~~g--~~~~~~~~~~i~--------~~----------------~~- 456 (584)
|++.-+..+++ |.+| |+|+++.|.... .| ..
T Consensus 116 ~~~H~~f~~l~~~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~~ 195 (418)
T KOG1167|consen 116 YFEHDRFRDLYRSLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEHSRSY 195 (418)
T ss_pred ccCccCHHHHHhcCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHHHhhhhhhhhhhh
Confidence 99987764433 3333 567777554210 00 00
Q ss_pred -----------------EEecC--CC------------cccccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCC
Q 007935 457 -----------------IVTSG--TG------------SRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505 (584)
Q Consensus 457 -----------------~~~~~--~~------------~~~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~ 505 (584)
+.... .+ ....+||++|.|||++..-...++++||||-||+++-+++++
T Consensus 196 ~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~ 275 (418)
T KOG1167|consen 196 SGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRR 275 (418)
T ss_pred hcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhccc
Confidence 00000 00 011379999999999877667899999999999999999999
Q ss_pred CCCCCCCCCCCcHHHHHH--------HHh--hcCCCCcc--c--cChhhhh--------hhhH------------HHHHH
Q 007935 506 LPDAGPENDGKGLESLVR--------KAF--RERRPLSE--V--IDPALVK--------EIHA------------KRQVL 551 (584)
Q Consensus 506 ~p~~~~~~~~~~l~~~~~--------~~~--~~~~~~~~--~--~d~~~~~--------~~~~------------~~~~~ 551 (584)
.||.....+...+.+++. +.. .+...+.+ . ..++... .+.. .....
T Consensus 276 ~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~ 355 (418)
T KOG1167|consen 276 YPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPA 355 (418)
T ss_pred cccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeeccccccccH
Confidence 999876666555544321 110 11100011 0 0011100 0000 01123
Q ss_pred HHHHHHhcccCCCCCCCCChHHHHH
Q 007935 552 ATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 552 ~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.++++..+|++.||.+|.|+++.++
T Consensus 356 ~~~dlLdk~le~np~kRitAEeALk 380 (418)
T KOG1167|consen 356 LLLDLLDKCLELNPQKRITAEDALK 380 (418)
T ss_pred HHHHHHHHHccCChhhcccHHHHhc
Confidence 6789999999999999999999875
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.71 E-value=8e-18 Score=166.40 Aligned_cols=158 Identities=20% Similarity=0.256 Sum_probs=126.7
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcC------CCceeeeeEEEEeCCcee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ------HPNIVRLKAFYYANDEKL 421 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~------HpnIV~l~g~~~~~~~~~ 421 (584)
...|+|-|++|.+|.....+ ..||||+++....- .+.=++|+++|++|+ --|+++|+-.|...++.+
T Consensus 438 ~~~GkGvFs~Vvra~D~~r~-----~~vAiKIIRnNE~M--~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLC 510 (752)
T KOG0670|consen 438 GYTGKGVFSTVVRARDQARG-----QEVAIKIIRNNEVM--HKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLC 510 (752)
T ss_pred eccccceeeeeeeccccCCC-----CeeEEEEeecchHH--hhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeE
Confidence 45789999999999987765 79999999875332 266689999999994 348999999999999999
Q ss_pred EeeecccCCcHHHHHhcc------------------------------cccccCCCCcccccc-CeEEecCCCcccccC-
Q 007935 422 LISDFIRNGSLYAALHGF------------------------------GLNRLLPGTSKVTKN-ETIVTSGTGSRISAI- 469 (584)
Q Consensus 422 lV~Ey~~~GsL~~~L~~~------------------------------g~~~~~~~~~~i~~~-~~~~~~~~~~~~~~g- 469 (584)
||+|-..- +|.+.|..+ -|++++++|+++... ...+.++||+...++
T Consensus 511 lVFE~Lsl-NLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~e 589 (752)
T KOG0670|consen 511 LVFEPLSL-NLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSASFASE 589 (752)
T ss_pred EEehhhhc-hHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCcccccccc
Confidence 99998754 787777654 368888888877766 445568888765433
Q ss_pred --------CCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCC
Q 007935 470 --------SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEND 514 (584)
Q Consensus 470 --------t~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~ 514 (584)
+..|.|||+++ |..|+...|+||.||+||||.||+.-|.+....
T Consensus 590 neitPYLVSRFYRaPEIiL-G~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN 641 (752)
T KOG0670|consen 590 NEITPYLVSRFYRAPEIIL-GLPYDYPIDTWSVGCTLYELYTGKILFPGRTNN 641 (752)
T ss_pred ccccHHHHHHhccCcceee-cCcccCCccceeeceeeEEeeccceecCCCCcH
Confidence 34599999966 479999999999999999999999999875543
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.2e-17 Score=153.54 Aligned_cols=154 Identities=21% Similarity=0.303 Sum_probs=119.0
Q ss_pred eceeecCceEEEEEecCCCCCCCceEEEEEEecCC-CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC------Ccee
Q 007935 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN------DEKL 421 (584)
Q Consensus 349 ~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~------~~~~ 421 (584)
.+|.|.- .|-.+...-.+ +.||+|++... ......++..+|..++..+.|+|||+++.++.-. .+.|
T Consensus 24 p~~~g~~-~v~~a~D~v~~-----~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y 97 (369)
T KOG0665|consen 24 PIGSGAQ-IVVAAFDQVLG-----RPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVY 97 (369)
T ss_pred ccCCCCc-eEEecchhhcc-----CceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHH
Confidence 4666665 55555544433 78999998765 2233347788999999999999999999998653 3689
Q ss_pred EeeecccCCcHHHH-----------------------Hhc--ccccccCCCCccccccCeEEecCCCccc----------
Q 007935 422 LISDFIRNGSLYAA-----------------------LHG--FGLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 422 lV~Ey~~~GsL~~~-----------------------L~~--~g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
+|||||.. +|.+. +|. .+|++++++|+.+..+...+..+||.+.
T Consensus 98 ~v~e~m~~-nl~~vi~~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~~~mtp 176 (369)
T KOG0665|consen 98 LVMELMDA-NLCQVILMELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTDFMMTP 176 (369)
T ss_pred HHHHhhhh-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccCcccccCc
Confidence 99999975 66433 343 3578899999988888888887776433
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCC
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAG 510 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~ 510 (584)
.+.|..|.|||++.. ..|.+.+||||.||++.||++|+.-|.+
T Consensus 177 yVvtRyyrapevil~-~~~ke~vdiwSvGci~gEli~~~Vlf~g 219 (369)
T KOG0665|consen 177 YVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGELILGTVLFPG 219 (369)
T ss_pred hhheeeccCchheec-cCCcccchhhhhhhHHHHHhhceEEecC
Confidence 356778999999766 4599999999999999999999988875
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.7e-18 Score=156.83 Aligned_cols=158 Identities=19% Similarity=0.328 Sum_probs=127.1
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC-CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC-----Cce
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN-----DEK 420 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~-----~~~ 420 (584)
++-||-|+||+||.+...+.+ +.||.|++..- ..-..-+++.+|+++|.-++|.|++..++..... .+.
T Consensus 58 DRPIGYGAFGVVWsVTDPRdg-----rrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEi 132 (449)
T KOG0664|consen 58 DRPIGYGAFGVVWSVTDPRSG-----KRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQEL 132 (449)
T ss_pred CCcccccceeEEEeccCCCCc-----cchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHH
Confidence 345999999999999998877 89999998654 2222347899999999999999999999877654 357
Q ss_pred eEeeecccCCcH-------------------------HHHHhccc--ccccCCCCccccccCeEEecCCCcccc------
Q 007935 421 LLISDFIRNGSL-------------------------YAALHGFG--LNRLLPGTSKVTKNETIVTSGTGSRIS------ 467 (584)
Q Consensus 421 ~lV~Ey~~~GsL-------------------------~~~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~~------ 467 (584)
|+|.|.|.. +| ..|||.-+ |++++++|..+..+-..++.+||....
T Consensus 133 YV~TELmQS-DLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~ 211 (449)
T KOG0664|consen 133 YVLTELMQS-DLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDR 211 (449)
T ss_pred HHHHHHHHh-hhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchhhh
Confidence 889998865 55 24455444 688999998888888888888885432
Q ss_pred ------cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCC
Q 007935 468 ------AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAG 510 (584)
Q Consensus 468 ------~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~ 510 (584)
+-|-.|.|||+++...+|+.+.||||.||++.||+.++.-|..
T Consensus 212 ~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQA 260 (449)
T KOG0664|consen 212 LNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQA 260 (449)
T ss_pred hhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhc
Confidence 3466799999988878999999999999999999998888864
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.6e-17 Score=151.81 Aligned_cols=216 Identities=16% Similarity=0.169 Sum_probs=155.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEE-EEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAF-YYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~-~~~~~~~~lV~ 424 (584)
...+|+|.||.+-.+.++... +.+++|-+...... .++|.+|..---.| .|.|||.-++. |++.+..++++
T Consensus 29 ~k~lgeG~FgkIlL~eHr~s~-----t~ivlKavp~p~tt--~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~q 101 (378)
T KOG1345|consen 29 NKQLGEGRFGKILLAEHRQSK-----TRIVLKAVPRPQTT--QADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQ 101 (378)
T ss_pred HHHhcccceeeEEeeeccCCc-----eEEEeeccCcchhh--HHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEee
Confidence 457999999999999998876 89999999875443 38999999865566 68999988864 56677788999
Q ss_pred ecccCCcHH------------------------HHHhcc--cccccCCCCcccccc--CeEEecCCCcccccCCC-----
Q 007935 425 DFIRNGSLY------------------------AALHGF--GLNRLLPGTSKVTKN--ETIVTSGTGSRISAISN----- 471 (584)
Q Consensus 425 Ey~~~GsL~------------------------~~L~~~--g~~~~~~~~~~i~~~--~~~~~~~~~~~~~~gt~----- 471 (584)
||+|.|+|. +|+|+. .|++++.+|+.|... ..++..+||.+...|+.
T Consensus 102 E~aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~~~ 181 (378)
T KOG1345|consen 102 EFAPRGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKYLE 181 (378)
T ss_pred ccCccchhhhhcCcccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCceehhhh
Confidence 999999994 444543 578888888876543 56777899887766643
Q ss_pred ---cccCcccccc----CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhh
Q 007935 472 ---VYLAPEARIY----GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEI 544 (584)
Q Consensus 472 ---~y~aPE~~~~----~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~ 544 (584)
.|-+||.... .-...+.+|||.||++++.++||..||......+..+.+|....-+.....++.+.+-
T Consensus 182 ~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~~f----- 256 (378)
T KOG1345|consen 182 YVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKKFNPF----- 256 (378)
T ss_pred hhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCchhhccc-----
Confidence 4899996432 1235678999999999999999999998665566667777655544333333322211
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHH
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~ 579 (584)
. .++.++-.+-+.++|++|--..++.++-.
T Consensus 257 s-----~~a~r~Fkk~lt~~~~drcki~~~kk~rk 286 (378)
T KOG1345|consen 257 S-----EKALRLFKKSLTPRFKDRCKIWTAKKMRK 286 (378)
T ss_pred C-----HHHHHHHHHhcCCcccccchhHHHHHHHH
Confidence 1 12233444578888888866666655443
|
|
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.68 E-value=8.1e-19 Score=149.58 Aligned_cols=151 Identities=28% Similarity=0.430 Sum_probs=134.6
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
+.++.|.|++|.++ .+|+.+..|.+|+.|++++|+|+ .+|.+++++++|+.|+++-|++. .+|..|+.++.|+.|||
T Consensus 33 s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levldl 109 (264)
T KOG0617|consen 33 SNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLDL 109 (264)
T ss_pred hhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhhc
Confidence 57899999999999 77888999999999999999998 58999999999999999999998 89999999999999999
Q ss_pred ccCCCC-CCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCC
Q 007935 145 SSNLLN-GSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 145 s~N~l~-~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
++|+++ ..+|..|..+..|+ .|+|+.|.|. .+|..++++++|+.|.+..|.+-..+-+++.+..+..+...||.
T Consensus 110 tynnl~e~~lpgnff~m~tlr-alyl~dndfe-~lp~dvg~lt~lqil~lrdndll~lpkeig~lt~lrelhiqgnr 184 (264)
T KOG0617|consen 110 TYNNLNENSLPGNFFYMTTLR-ALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLLSLPKEIGDLTRLRELHIQGNR 184 (264)
T ss_pred cccccccccCCcchhHHHHHH-HHHhcCCCcc-cCChhhhhhcceeEEeeccCchhhCcHHHHHHHHHHHHhcccce
Confidence 999985 46899999999998 8999999998 78888999999999999999988776677777777777777775
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.68 E-value=9.5e-17 Score=147.23 Aligned_cols=106 Identities=22% Similarity=0.269 Sum_probs=70.9
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHH
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAK 547 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 547 (584)
.||+.|||||++.. ..++.|+|||||||++|||+||+.||.........+..+........ + .. .+.. ...
T Consensus 65 ~g~~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-~-~~--~~~~----~~~ 135 (176)
T smart00750 65 RVDPYFMAPEVIQG-QSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADD-P-RD--RSNL----ESV 135 (176)
T ss_pred CCcccccChHHhcC-CCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCC-c-cc--cccH----HHH
Confidence 67899999999654 68999999999999999999999999753322222222221111110 0 00 0000 000
Q ss_pred HHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 548 RQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 548 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.....+.+++.+||+.+|++||++.|+++.+..+.
T Consensus 136 ~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 136 SAARSFADFMRVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred HhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence 11125788999999999999999999999887653
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.2e-15 Score=150.41 Aligned_cols=78 Identities=10% Similarity=0.158 Sum_probs=63.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcC-----C---CceeeeeEEEEe--
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-----H---PNIVRLKAFYYA-- 416 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~-----H---pnIV~l~g~~~~-- 416 (584)
.+.||-|.|++||.+....+. +.||+|+.+.... ..+..+.||++|++++ | .+||+|+++|..
T Consensus 83 ~rKLGWGHFSTVWLawDtq~~-----r~VAlKVvKSAqh--YtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG 155 (590)
T KOG1290|consen 83 QRKLGWGHFSTVWLAWDTQNK-----RYVALKVVKSAQH--YTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG 155 (590)
T ss_pred EEeccccccceeEEEeeccCC-----eEEEEEEEehhhH--HHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence 357999999999999998876 8999999987532 2367889999999983 3 379999999976
Q ss_pred --CCceeEeeecccCCcH
Q 007935 417 --NDEKLLISDFIRNGSL 432 (584)
Q Consensus 417 --~~~~~lV~Ey~~~GsL 432 (584)
+.++++|+||.- -+|
T Consensus 156 pNG~HVCMVfEvLG-dnL 172 (590)
T KOG1290|consen 156 PNGQHVCMVFEVLG-DNL 172 (590)
T ss_pred CCCcEEEEEehhhh-hHH
Confidence 457999999984 355
|
|
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.63 E-value=7.2e-18 Score=143.83 Aligned_cols=139 Identities=24% Similarity=0.355 Sum_probs=130.2
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccC-CCCcccCCCCCCCeee
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG-PIPDRIKTLKNLTHLD 143 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L~ 143 (584)
.+++.|++++|++. .+|.++++|+.|+.|++.-|++. .+|..|++++.|+.|||++|++.. .+|..|..|+.|+.|+
T Consensus 56 ~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levldltynnl~e~~lpgnff~m~tlraly 133 (264)
T KOG0617|consen 56 KNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLDLTYNNLNENSLPGNFFYMTTLRALY 133 (264)
T ss_pred hhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhhccccccccccCCcchhHHHHHHHHH
Confidence 46888999999998 78999999999999999999998 689999999999999999999974 6899999999999999
Q ss_pred cccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCc
Q 007935 144 LSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSL 208 (584)
Q Consensus 144 ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 208 (584)
|+.|.|. .+|+.++++++|+ .|.+..|.+- .+|..++.++.|++|.+.+|.++-.+|+++.+
T Consensus 134 l~dndfe-~lp~dvg~lt~lq-il~lrdndll-~lpkeig~lt~lrelhiqgnrl~vlppel~~l 195 (264)
T KOG0617|consen 134 LGDNDFE-ILPPDVGKLTNLQ-ILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRLTVLPPELANL 195 (264)
T ss_pred hcCCCcc-cCChhhhhhccee-EEeeccCchh-hCcHHHHHHHHHHHHhcccceeeecChhhhhh
Confidence 9999998 9999999999999 9999999998 79999999999999999999999999976654
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.1e-15 Score=172.72 Aligned_cols=155 Identities=17% Similarity=0.172 Sum_probs=100.4
Q ss_pred hcCC-CceeeeeEEE-------EeCCceeEeeecccCCcHHHHHh--------------------------cc--ccccc
Q 007935 401 RVQH-PNIVRLKAFY-------YANDEKLLISDFIRNGSLYAALH--------------------------GF--GLNRL 444 (584)
Q Consensus 401 ~l~H-pnIV~l~g~~-------~~~~~~~lV~Ey~~~GsL~~~L~--------------------------~~--g~~~~ 444 (584)
.++| +||++++++| .+.+..+.++||+ +++|+++|+ .. -|+++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDl 106 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNV 106 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccC
Confidence 4556 6888899987 3334677888988 458876663 33 36888
Q ss_pred CCCCcccccc-------------------CeEEecCCCccc---------------------------ccCCCcccCccc
Q 007935 445 LPGTSKVTKN-------------------ETIVTSGTGSRI---------------------------SAISNVYLAPEA 478 (584)
Q Consensus 445 ~~~~~~i~~~-------------------~~~~~~~~~~~~---------------------------~~gt~~y~aPE~ 478 (584)
++.|+.+... ...+..+||... ..||+.|||||+
T Consensus 107 KP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~ 186 (793)
T PLN00181 107 RPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEE 186 (793)
T ss_pred CchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhh
Confidence 8888877432 223333443211 247888999999
Q ss_pred cccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHh
Q 007935 479 RIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIAL 558 (584)
Q Consensus 479 ~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~ 558 (584)
+.. ..|+.++|||||||+||||++|..|+... ........... .++... ....+...++.
T Consensus 187 ~~~-~~~~~~sDVwSlGviL~ELl~~~~~~~~~-------~~~~~~~~~~~------~~~~~~------~~~~~~~~~~~ 246 (793)
T PLN00181 187 DNG-SSSNCASDVYRLGVLLFELFCPVSSREEK-------SRTMSSLRHRV------LPPQIL------LNWPKEASFCL 246 (793)
T ss_pred hcc-CCCCchhhhhhHHHHHHHHhhCCCchhhH-------HHHHHHHHHhh------cChhhh------hcCHHHHHHHH
Confidence 554 68999999999999999999998886521 11111111110 111110 01123346778
Q ss_pred cccCCCCCCCCChHHHHH
Q 007935 559 NCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 559 ~Cl~~~P~~RPt~~ev~~ 576 (584)
+||+++|.+||+|.||++
T Consensus 247 ~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 247 WLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred HhCCCChhhCcChHHHhh
Confidence 899999999999999975
|
|
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.5e-16 Score=158.10 Aligned_cols=162 Identities=22% Similarity=0.247 Sum_probs=101.0
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
..+.+|+|..|+++..-..++.+|+.|++|+||+|.|....+..+....+|++|+|++|+|+..-+.+|..|+.|+.|+|
T Consensus 269 ~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnL 348 (873)
T KOG4194|consen 269 EKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNL 348 (873)
T ss_pred cccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcc
Confidence 45778888888888766777888888888888888888777777777788888888888887555556665665555555
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCcccc---------------------------CccccCCCCCcEEEeecCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQI---------------------------PEMYGHFPVMVSLDLRNNN 197 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~---------------------------p~~~~~l~~L~~L~l~~N~ 197 (584)
++|+++..-...|..+++|+ .|||++|.|++.+ ...|..++.|+.|||.+|.
T Consensus 349 s~Nsi~~l~e~af~~lssL~-~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~Na 427 (873)
T KOG4194|consen 349 SHNSIDHLAEGAFVGLSSLH-KLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNA 427 (873)
T ss_pred cccchHHHHhhHHHHhhhhh-hhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCc
Confidence 55555533344444455554 4555555554443 3445555555555555555
Q ss_pred CccCCCCCCCccccCCcccCCCCCCCCCCC
Q 007935 198 LSGEIPQVGSLLNQGPTAFSGNPGLCGFPL 227 (584)
Q Consensus 198 l~~~~p~~~~~~~~~~~~~~~n~~l~~~~~ 227 (584)
|...-|....-.++..+.+.....+|++++
T Consensus 428 iaSIq~nAFe~m~Lk~Lv~nSssflCDCql 457 (873)
T KOG4194|consen 428 IASIQPNAFEPMELKELVMNSSSFLCDCQL 457 (873)
T ss_pred ceeecccccccchhhhhhhcccceEEeccH
Confidence 554444333333444555555556776643
|
|
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.4e-16 Score=151.59 Aligned_cols=147 Identities=26% Similarity=0.353 Sum_probs=123.4
Q ss_pred EEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeeccc
Q 007935 67 VTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSS 146 (584)
Q Consensus 67 v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~ 146 (584)
+..|++.+|.+....|..+. ++.|++||...|-++ .+|.+++.+.+|..|+|.+|.|. .+| .|.+++.|+.|+++.
T Consensus 162 l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~ 237 (565)
T KOG0472|consen 162 LSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGE 237 (565)
T ss_pred HHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcc
Confidence 44556666666644333333 777888888887775 68888888888999999999987 677 788899999999999
Q ss_pred CCCCCCchHHhh-ccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCCC
Q 007935 147 NLLNGSLPEFLL-DLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPG 221 (584)
Q Consensus 147 N~l~~~~p~~~~-~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~ 221 (584)
|++. .+|.... +++++. .|||..|+++ ..|+.+.-+.+|..||||+|.|++.++.++++ .+..+.+.|||.
T Consensus 238 N~i~-~lpae~~~~L~~l~-vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is~Lp~sLgnl-hL~~L~leGNPl 309 (565)
T KOG0472|consen 238 NQIE-MLPAEHLKHLNSLL-VLDLRDNKLK-EVPDEICLLRSLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPL 309 (565)
T ss_pred cHHH-hhHHHHhcccccce-eeeccccccc-cCchHHHHhhhhhhhcccCCccccCCcccccc-eeeehhhcCCch
Confidence 9998 8888776 899999 9999999999 89999999999999999999999999999998 888999999983
|
|
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.52 E-value=3.7e-15 Score=143.37 Aligned_cols=168 Identities=21% Similarity=0.263 Sum_probs=134.2
Q ss_pred eeeEecC-----------CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCC-Ccc
Q 007935 58 SGIHCIR-----------NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAH-NSF 125 (584)
Q Consensus 58 ~gv~c~~-----------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~-N~l 125 (584)
.-|.|+. ...++|+|..|+|+...|..|+.+++|+.||||+|+|+.+-|..|..+.+|..|-+-+ |+|
T Consensus 49 ~~VdCr~~GL~eVP~~LP~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI 128 (498)
T KOG4237|consen 49 GIVDCRGKGLTEVPANLPPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKI 128 (498)
T ss_pred ceEEccCCCcccCcccCCCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCch
Confidence 3478864 4688999999999988889999999999999999999998899999888877775555 777
Q ss_pred cCCCCcccCC----------------------------------------------------------------------
Q 007935 126 CGPIPDRIKT---------------------------------------------------------------------- 135 (584)
Q Consensus 126 ~~~~p~~~~~---------------------------------------------------------------------- 135 (584)
+....+.|++
T Consensus 129 ~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~w 208 (498)
T KOG4237|consen 129 TDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPW 208 (498)
T ss_pred hhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccch
Confidence 6322223322
Q ss_pred ----------------------------------------------------------------CCCCCeeecccCCCCC
Q 007935 136 ----------------------------------------------------------------LKNLTHLDLSSNLLNG 151 (584)
Q Consensus 136 ----------------------------------------------------------------l~~L~~L~ls~N~l~~ 151 (584)
|++|+.|+|++|++++
T Consensus 209 la~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~ 288 (498)
T KOG4237|consen 209 LADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITR 288 (498)
T ss_pred hhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccch
Confidence 2268888888888888
Q ss_pred CchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCC-CCCccccCCcccCCCCCCCCCC
Q 007935 152 SLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ-VGSLLNQGPTAFSGNPGLCGFP 226 (584)
Q Consensus 152 ~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~~~~~~~~~~~n~~l~~~~ 226 (584)
.-+.+|.++..++ .|+|..|+|...-...|.+++.|+.|+|.+|+|+-.-|. +..+..+..+.+-+||..|.+.
T Consensus 289 i~~~aFe~~a~l~-eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~ 363 (498)
T KOG4237|consen 289 IEDGAFEGAAELQ-ELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCR 363 (498)
T ss_pred hhhhhhcchhhhh-hhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccc
Confidence 8888888888888 888888888766677888999999999999999987772 2334456677788999988764
|
|
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.4e-15 Score=152.04 Aligned_cols=152 Identities=32% Similarity=0.381 Sum_probs=75.5
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccC-CCCcccCCCCCCCeee
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG-PIPDRIKTLKNLTHLD 143 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L~ 143 (584)
.++++|.|...+|. .+|+.++.|.+|++|.+++|++.. +-.++..|+.|+.+.+.+|++.. -+|+.+..|..|+.||
T Consensus 32 t~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~~-vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lD 109 (1255)
T KOG0444|consen 32 TQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLIS-VHGELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILD 109 (1255)
T ss_pred hheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhHh-hhhhhccchhhHHHhhhccccccCCCCchhcccccceeee
Confidence 34566666555555 455666666666666666665542 33444455555555555555431 2444444555555555
Q ss_pred cccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCC
Q 007935 144 LSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 144 ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
||+|+|+ ..|..+..-+++. .|+||+|+|...+-..|-+|+.|-.||||+|.+...+|+..-+..+..+.+++||
T Consensus 110 LShNqL~-EvP~~LE~AKn~i-VLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe~LPPQ~RRL~~LqtL~Ls~NP 184 (1255)
T KOG0444|consen 110 LSHNQLR-EVPTNLEYAKNSI-VLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLEMLPPQIRRLSMLQTLKLSNNP 184 (1255)
T ss_pred cchhhhh-hcchhhhhhcCcE-EEEcccCccccCCchHHHhhHhHhhhccccchhhhcCHHHHHHhhhhhhhcCCCh
Confidence 5555554 4455554444444 5555555554222233444455555555555555444444444444444444443
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.48 E-value=8.7e-15 Score=149.65 Aligned_cols=182 Identities=23% Similarity=0.345 Sum_probs=134.6
Q ss_pred eceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc-chhhHhHHHHHHHHHhcC-CCceeeeeEEEEeCCceeEeeec
Q 007935 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQ-HPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 349 ~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~-~~~~~~f~~Ei~~l~~l~-HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
++|+|.||.|+.++...+. .+.+..|.|.+++... .........|-.++...+ ||.+|++.-.++.+...+++++|
T Consensus 1 vlg~g~~gkvfLvrk~~g~--da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~ 78 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGA--DAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDF 78 (612)
T ss_pred CCCcCCCcchHHHHHhccc--cccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhh
Confidence 3789999999987655543 2337788888876521 111124556888899996 99999999999999999999999
Q ss_pred ccCCcHHHHH-------------------------hcccc--cccCCCCccccccCeEEecCCCccc-------ccCCCc
Q 007935 427 IRNGSLYAAL-------------------------HGFGL--NRLLPGTSKVTKNETIVTSGTGSRI-------SAISNV 472 (584)
Q Consensus 427 ~~~GsL~~~L-------------------------~~~g~--~~~~~~~~~i~~~~~~~~~~~~~~~-------~~gt~~ 472 (584)
..+|+|..++ |..|+ ++.+.+++.++.++.++..+++.+. .+||..
T Consensus 79 ~rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~cgt~e 158 (612)
T KOG0603|consen 79 LRGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIACGTYE 158 (612)
T ss_pred cccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhhhcccchh
Confidence 9999985433 44443 5666778888888888888887542 378999
Q ss_pred ccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhh
Q 007935 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEI 544 (584)
Q Consensus 473 y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~ 544 (584)
|||||+.. .....+|.|||||+++||+||..||.. +.+.........++..+++.....+
T Consensus 159 ymApEI~~---gh~~a~D~ws~gvl~felltg~~pf~~---------~~~~~Il~~~~~~p~~l~~~a~~~~ 218 (612)
T KOG0603|consen 159 YRAPEIIN---GHLSAADWWSFGVLAFELLTGTLPFGG---------DTMKRILKAELEMPRELSAEARSLF 218 (612)
T ss_pred hhhhHhhh---ccCCcccchhhhhhHHHHhhCCCCCch---------HHHHHHhhhccCCchhhhHHHHHHH
Confidence 99999843 367899999999999999999999974 3445555545555555555554443
|
|
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.47 E-value=4.4e-15 Score=150.21 Aligned_cols=151 Identities=31% Similarity=0.431 Sum_probs=102.8
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccc-cCCCCCCEEecCCCcccCCCCcccCCCCCCCeee
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANL-FNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLD 143 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~-~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 143 (584)
..++.|+||+|+|+ ..|..+..-+++-+|+||+|+|. .||..+ .+|+.|-.||||+|++. .+|+.+..|..|++|+
T Consensus 103 ~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~ 179 (1255)
T KOG0444|consen 103 KDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLK 179 (1255)
T ss_pred ccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhh
Confidence 35677777777776 56777777777777777777776 466553 46777777777777776 6666777777777777
Q ss_pred cccCCCC-------------------------CCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCC
Q 007935 144 LSSNLLN-------------------------GSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNL 198 (584)
Q Consensus 144 ls~N~l~-------------------------~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l 198 (584)
||+|-|. ..+|.++-++.+|. .+|||.|.+. .+|+.+-++++|+.|+||+|.|
T Consensus 180 Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~-dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~i 257 (1255)
T KOG0444|consen 180 LSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLR-DVDLSENNLP-IVPECLYKLRNLRRLNLSGNKI 257 (1255)
T ss_pred cCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhh-hccccccCCC-cchHHHhhhhhhheeccCcCce
Confidence 7777543 12455666666676 7777777777 6777777777777777777777
Q ss_pred ccCCCCCCCccccCCcccCCCC
Q 007935 199 SGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 199 ~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
+..--..+...++..+.++.|.
T Consensus 258 teL~~~~~~W~~lEtLNlSrNQ 279 (1255)
T KOG0444|consen 258 TELNMTEGEWENLETLNLSRNQ 279 (1255)
T ss_pred eeeeccHHHHhhhhhhccccch
Confidence 7554444445555666666664
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.5e-14 Score=155.17 Aligned_cols=220 Identities=20% Similarity=0.230 Sum_probs=146.1
Q ss_pred hcceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEe
Q 007935 345 ASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLI 423 (584)
Q Consensus 345 ~~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV 423 (584)
....++|.|++|.|+.............+.+++| ..... .......+..|..+-.+++|||++..+..+.+....+-+
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~-~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~ 399 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVR-VKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQS 399 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcc-cCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhh
Confidence 3568999999998888777665432222333333 21221 111123367788888999999999998888887777777
Q ss_pred eecccCCcHH-------------------------HHHhccc--ccccCCCCccccccCeEEecCCCcc-----------
Q 007935 424 SDFIRNGSLY-------------------------AALHGFG--LNRLLPGTSKVTKNETIVTSGTGSR----------- 465 (584)
Q Consensus 424 ~Ey~~~GsL~-------------------------~~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~----------- 465 (584)
||||++ +|+ +|+|+.| |++++.+|..+..++.+++.++|..
T Consensus 400 mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~ 478 (601)
T KOG0590|consen 400 MEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNI 478 (601)
T ss_pred hhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCcchhh
Confidence 999999 885 3445555 5677778877777777777776632
Q ss_pred ----cccCCCcccCccccccCCCCC-CccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhh
Q 007935 466 ----ISAISNVYLAPEARIYGSKFT-QKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPAL 540 (584)
Q Consensus 466 ----~~~gt~~y~aPE~~~~~~~~~-~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~ 540 (584)
..+|+..|+|||++.. ..|. ...||||.||++..|++|+.||..+......... ....... .....+.
T Consensus 479 ~~~~g~~gS~pY~apE~~~~-~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~---~~~~~~~--~~~~~~~- 551 (601)
T KOG0590|consen 479 HESSGIVGSDPYLAPEVLTG-KEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKT---NNYSDQR--NIFEGPN- 551 (601)
T ss_pred hhhcCcccCCcCcCcccccc-cccCcchhhhhhccceEEEEecCCCccccccccccchhh---hcccccc--ccccChH-
Confidence 2368889999999555 5665 5789999999999999999999865544332200 0000000 0000000
Q ss_pred hhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 541 VKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 541 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.. ......+...++.++++.||.+|-|+++|++
T Consensus 552 -~~--~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 552 -RL--LSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred -HH--HHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 00 0122345567888999999999999999985
|
|
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.44 E-value=6.8e-14 Score=140.85 Aligned_cols=149 Identities=23% Similarity=0.341 Sum_probs=111.5
Q ss_pred CCCCcceeeEecC----------------CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCC
Q 007935 52 STPCHWSGIHCIR----------------NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNL 115 (584)
Q Consensus 52 ~~~c~w~gv~c~~----------------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L 115 (584)
+|+|.=.-..|+. +.++.|+|++|.|+.+-+..|-++++|+.++|..|.++ .||.......+|
T Consensus 49 ~c~c~~~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl 127 (873)
T KOG4194|consen 49 TCPCNTRLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHL 127 (873)
T ss_pred cCCCCceeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccce
Confidence 5677766677753 35778999999999888999999999999999999998 588666666668
Q ss_pred CEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCch-HHhhccccCccEEEeccccCccccCccccCCCCCcEEEee
Q 007935 116 VYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLP-EFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLR 194 (584)
Q Consensus 116 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p-~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~ 194 (584)
+.|+|.+|.|+..-...+.-++.|+.||||.|.|+ .+| ++|..-.+++ .|+|++|.|+..--+.|.++.+|..|.|+
T Consensus 128 ~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is-~i~~~sfp~~~ni~-~L~La~N~It~l~~~~F~~lnsL~tlkLs 205 (873)
T KOG4194|consen 128 EKLDLRHNLISSVTSEELSALPALRSLDLSRNLIS-EIPKPSFPAKVNIK-KLNLASNRITTLETGHFDSLNSLLTLKLS 205 (873)
T ss_pred eEEeeeccccccccHHHHHhHhhhhhhhhhhchhh-cccCCCCCCCCCce-EEeeccccccccccccccccchheeeecc
Confidence 88888888887666666777777777777777777 444 3444445666 77777777776666667777777777777
Q ss_pred cCCCccCCC
Q 007935 195 NNNLSGEIP 203 (584)
Q Consensus 195 ~N~l~~~~p 203 (584)
+|.++..++
T Consensus 206 rNrittLp~ 214 (873)
T KOG4194|consen 206 RNRITTLPQ 214 (873)
T ss_pred cCcccccCH
Confidence 777776555
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=6.4e-13 Score=133.69 Aligned_cols=126 Identities=17% Similarity=0.074 Sum_probs=92.8
Q ss_pred ceeceeecCceEEEEEecC-CCCCCCceEEEEEEecCCC----cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCcee
Q 007935 347 AYVVGKSKNGIMYKVVVGR-GSGMGAPTVVAVRRLTEGD----ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKL 421 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~-~~~~~~~~~vAvK~l~~~~----~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~ 421 (584)
.+.||+|+||+||+|.... ++ +.||||++.... .....+.|.+|+++|++++|+|+|+.+.. .+..+
T Consensus 23 ~~~IG~G~fg~Vy~a~~~~~~~-----~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~~~~ 94 (365)
T PRK09188 23 TAVLKRDVFSTVERGYFAGDPG-----TARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TGKDG 94 (365)
T ss_pred ccEEeecCcEEEEEEEEcCCCC-----eEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cCCcE
Confidence 4679999999999998765 33 678999875331 12234679999999999999999953322 25689
Q ss_pred EeeecccCCcHH------------------HHHhccc--cccc-CCCCccccccCeEEecCCCccc--------------
Q 007935 422 LISDFIRNGSLY------------------AALHGFG--LNRL-LPGTSKVTKNETIVTSGTGSRI-------------- 466 (584)
Q Consensus 422 lV~Ey~~~GsL~------------------~~L~~~g--~~~~-~~~~~~i~~~~~~~~~~~~~~~-------------- 466 (584)
+||||+++++|. .++|+.| |+++ ++.|+.+..++.++..|||...
T Consensus 95 LVmE~~~G~~L~~~~~~~~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~~~~~~~~~~ 174 (365)
T PRK09188 95 LVRGWTEGVPLHLARPHGDPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRRGALYRIAAY 174 (365)
T ss_pred EEEEccCCCCHHHhCccchHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccceecccCcchhhhhhh
Confidence 999999999884 3345554 6788 7888887666667777776432
Q ss_pred -----ccCCCcccCccccc
Q 007935 467 -----SAISNVYLAPEARI 480 (584)
Q Consensus 467 -----~~gt~~y~aPE~~~ 480 (584)
..+++.|+|||++.
T Consensus 175 ~d~~~~~~~~~~~~pe~~~ 193 (365)
T PRK09188 175 EDLRHLLKHKRTYAPDALT 193 (365)
T ss_pred hhhhhhhccCccCCcccCC
Confidence 24567799999853
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.42 E-value=5.3e-13 Score=136.72 Aligned_cols=177 Identities=21% Similarity=0.265 Sum_probs=116.3
Q ss_pred HHhcCCCceeeeeEEEEeCCceeEeeecccCCcHHHHHhcc------------------cc-----------cccCCCCc
Q 007935 399 IARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHGF------------------GL-----------NRLLPGTS 449 (584)
Q Consensus 399 l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~GsL~~~L~~~------------------g~-----------~~~~~~~~ 449 (584)
|+.+.|.|+.+++|.+.++...+.|.+||+.|+|.+.+... |+ ..+...|.
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nC 80 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNC 80 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccc
Confidence 35689999999999999999999999999999998877541 22 22223344
Q ss_pred cccccCeEEecCCCccccc-------------CCCcccCccccccC--C----CCCCccchhhHHHHHHHHHhCCCCCCC
Q 007935 450 KVTKNETIVTSGTGSRISA-------------ISNVYLAPEARIYG--S----KFTQKCDVYSFGIVLLEILTGRLPDAG 510 (584)
Q Consensus 450 ~i~~~~~~~~~~~~~~~~~-------------gt~~y~aPE~~~~~--~----~~~~ksDV~SfGvvl~ElltG~~p~~~ 510 (584)
.+...-.++..++|..... -...|.|||.+... . ..+.+.||||||++++|+++.+.||..
T Consensus 81 lvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~ 160 (484)
T KOG1023|consen 81 LVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDL 160 (484)
T ss_pred eeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCcccc
Confidence 4443334444555433221 12248999985331 1 146789999999999999999999986
Q ss_pred CCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 511 PENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 511 ~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
....... .+.+....... ...+-|.+.... +....+..++..||..+|.+||++.+|-..++.+.
T Consensus 161 ~~~~~~~-~eii~~~~~~~---~~~~rP~i~~~~---e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~ 225 (484)
T KOG1023|consen 161 RNLVEDP-DEIILRVKKGG---SNPFRPSIELLN---ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTIN 225 (484)
T ss_pred ccccCCh-HHHHHHHHhcC---CCCcCcchhhhh---hcchHHHHHHHHhcccChhhCccHHHHHhhhhhhc
Confidence 5443332 33333322211 111222222111 12226788999999999999999999988877653
|
|
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.2e-14 Score=138.33 Aligned_cols=151 Identities=32% Similarity=0.457 Sum_probs=125.6
Q ss_pred CEEEEEcCCCCCcccCCccccCCCCCCE-EEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 66 RVTSLYLPNRNLTGYMPSELGLLNSLTR-LSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 66 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~-L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
-|+.++++.|+|. .+|..+..+..+.+ +.+++|.+ +.+|..+..+++|..|+|++|-+. .+|..++.+..|+.|||
T Consensus 389 ~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~i-sfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~Lnl 465 (565)
T KOG0472|consen 389 IVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKI-SFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNL 465 (565)
T ss_pred ceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCcc-ccchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecc
Confidence 3899999999998 77877777776654 44555555 468888899999999999998887 78999999999999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPG 221 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~ 221 (584)
|+|+|. .+|..+..+..++ .+-.++||+....|+.+.+|.+|..|||.+|.+...+|.++.+.++..+.+.|||.
T Consensus 466 S~NrFr-~lP~~~y~lq~lE-tllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq~IPp~LgnmtnL~hLeL~gNpf 540 (565)
T KOG0472|consen 466 SFNRFR-MLPECLYELQTLE-TLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQQIPPILGNMTNLRHLELDGNPF 540 (565)
T ss_pred cccccc-cchHHHhhHHHHH-HHHhccccccccChHHhhhhhhcceeccCCCchhhCChhhccccceeEEEecCCcc
Confidence 999998 8998888888887 77777889886556668899999999999999998889888998888888888873
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.8e-11 Score=123.71 Aligned_cols=215 Identities=22% Similarity=0.317 Sum_probs=146.7
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcch--hhHhHHHHHHHHHhcCCC-ceeeeeEEEEeCCceeEee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATW--RFKDFESEVEAIARVQHP-NIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~--~~~~f~~Ei~~l~~l~Hp-nIV~l~g~~~~~~~~~lV~ 424 (584)
..||.|+||.||++... ..+++|.+....... ..+.|.+|+.+++.+.|+ +|+++.+++......++++
T Consensus 6 ~~l~~g~~~~v~~~~~~--------~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 77 (384)
T COG0515 6 RKLGEGSFGEVYLARDR--------KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVM 77 (384)
T ss_pred EeecCCCCeEEEEEEec--------cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEE
Confidence 46899999999999987 478999998763332 357899999999999988 7999999997777789999
Q ss_pred ecccCCcHHHHHh----------------------------ccc--ccccCCCCccccccC-eEEecCCCc---------
Q 007935 425 DFIRNGSLYAALH----------------------------GFG--LNRLLPGTSKVTKNE-TIVTSGTGS--------- 464 (584)
Q Consensus 425 Ey~~~GsL~~~L~----------------------------~~g--~~~~~~~~~~i~~~~-~~~~~~~~~--------- 464 (584)
||+.++++.+++. ..| |+++++.+..+.... .....++|.
T Consensus 78 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~ 157 (384)
T COG0515 78 EYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGS 157 (384)
T ss_pred ecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCc
Confidence 9999999875543 223 556666555555444 345555442
Q ss_pred --------ccccCCCcccCccccccC--CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC-Cc
Q 007935 465 --------RISAISNVYLAPEARIYG--SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP-LS 533 (584)
Q Consensus 465 --------~~~~gt~~y~aPE~~~~~--~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~-~~ 533 (584)
....||..|+|||..... ..++...|+||+|++++++++|..||...... ...............+ ..
T Consensus 158 ~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~ 236 (384)
T COG0515 158 TSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS-SATSQTLKIILELPTPSLA 236 (384)
T ss_pred cccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc-ccHHHHHHHHHhcCCcccc
Confidence 234688999999985542 47889999999999999999999997643321 0112222222222111 11
Q ss_pred cccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 534 EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 534 ~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
....+... ......+.++...|+..+|..|.++.+...
T Consensus 237 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 274 (384)
T COG0515 237 SPLSPSNP-----ELISKAASDLLKKLLAKDPKNRLSSSSDLS 274 (384)
T ss_pred cccCcccc-----chhhHHHHHHHHHHHhcCchhcCCHHHHhh
Confidence 11111110 111234556777789999999999887664
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.31 E-value=4.3e-13 Score=144.38 Aligned_cols=206 Identities=20% Similarity=0.308 Sum_probs=132.5
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHH--HHhcCCCceeeeeEEEEeCCceeEe
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEA--IARVQHPNIVRLKAFYYANDEKLLI 423 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~--l~~l~HpnIV~l~g~~~~~~~~~lV 423 (584)
..+.+|++.|=+|.+|+...| .|+||++-+....-..+.|.++++- ....+|||.+.+.-+-..+.-.|||
T Consensus 27 ~~~~LGstRFlKv~r~k~~eG-------~vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylv 99 (1431)
T KOG1240|consen 27 YVENLGSTRFLKVARAKDREG-------LVVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLV 99 (1431)
T ss_pred eecccCchhhhhhhhccCCCc-------eEEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHH
Confidence 345799999999999999887 5899998765444444556554443 4455999999998887777888999
Q ss_pred eecccCCcHHHHH-------------------------hcccc--cccCCCCccccccCeEEecCCCccc----------
Q 007935 424 SDFIRNGSLYAAL-------------------------HGFGL--NRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 424 ~Ey~~~GsL~~~L-------------------------~~~g~--~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
-+|..+ +|+|.| |..|+ -|++.+|+.|..-+-+...||.+-.
T Consensus 100 Rqyvkh-nLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPa 178 (1431)
T KOG1240|consen 100 RQYVKH-NLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPA 178 (1431)
T ss_pred HHHHhh-hhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCCCcc
Confidence 999977 787665 33344 4556666654433322223332110
Q ss_pred --------ccCCCcccCccccccC----------CCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhh
Q 007935 467 --------SAISNVYLAPEARIYG----------SKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFR 527 (584)
Q Consensus 467 --------~~gt~~y~aPE~~~~~----------~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~ 527 (584)
..--..|+|||-+..+ ...+++.||||.|||+.||++ |++||. +.++..-...
T Consensus 179 df~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~--------LSQL~aYr~~ 250 (1431)
T KOG1240|consen 179 DFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFT--------LSQLLAYRSG 250 (1431)
T ss_pred cceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCccc--------HHHHHhHhcc
Confidence 0011239999976542 126789999999999999988 788886 2222211111
Q ss_pred cCCCCccccChhh-hhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHH
Q 007935 528 ERRPLSEVIDPAL-VKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSES 577 (584)
Q Consensus 528 ~~~~~~~~~d~~~-~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 577 (584)
...+++. ...+.. ..+-++++.|++.||++|-++++.++.
T Consensus 251 ------~~~~~e~~Le~Ied----~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 251 ------NADDPEQLLEKIED----VSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred ------CccCHHHHHHhCcC----ccHHHHHHHHHccCchhccCHHHHHHh
Confidence 0111111 111111 133457777999999999999999875
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=3e-12 Score=139.48 Aligned_cols=94 Identities=35% Similarity=0.524 Sum_probs=73.0
Q ss_pred CCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEe
Q 007935 90 SLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNL 169 (584)
Q Consensus 90 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l 169 (584)
.++.|+|++|.+.|.+|..+..+++|+.|+|++|+|+|.+|..++.+++|+.|||++|+|+|.+|..++++++|+ .|+|
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~-~L~L 497 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLR-ILNL 497 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCC-EEEC
Confidence 366778888888877787777888888888888888777777777777888888888887777777777777777 7777
Q ss_pred ccccCccccCccccC
Q 007935 170 SFNQFSGQIPEMYGH 184 (584)
Q Consensus 170 ~~N~l~~~~p~~~~~ 184 (584)
++|+|+|.+|..++.
T Consensus 498 s~N~l~g~iP~~l~~ 512 (623)
T PLN03150 498 NGNSLSGRVPAALGG 512 (623)
T ss_pred cCCcccccCChHHhh
Confidence 777777777776654
|
|
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=8.7e-12 Score=116.55 Aligned_cols=148 Identities=14% Similarity=0.144 Sum_probs=103.6
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcch--hhHh------HHHHHHHHHhcCCCceeeeeEEEEeC
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATW--RFKD------FESEVEAIARVQHPNIVRLKAFYYAN 417 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~--~~~~------f~~Ei~~l~~l~HpnIV~l~g~~~~~ 417 (584)
..+++|.|+||.||.+.. ++ ..+|||.++...... .... |.+|+..+.+++|++|..+.+++...
T Consensus 35 ~~~~l~~~~f~~v~l~~~-~~------~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 35 TIKVFRNIDDTKVSLIDT-DY------GKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred EEEEecCCCceEEEEEec-CC------CcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 357999999999999655 33 579999997652221 1122 68999999999999999999986643
Q ss_pred --------CceeEeeecccCCcHHHH-----------------Hhcc--cccccCCCCccccccCeEEecCCCcccccCC
Q 007935 418 --------DEKLLISDFIRNGSLYAA-----------------LHGF--GLNRLLPGTSKVTKNETIVTSGTGSRISAIS 470 (584)
Q Consensus 418 --------~~~~lV~Ey~~~GsL~~~-----------------L~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~~~gt 470 (584)
+..+|||||++|.+|.++ +|+. -|+|++++|..+..++ +...|++..... .
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~~~~~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~liDfg~~~~~-~ 185 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPEISEDVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-LRIIDLSGKRCT-A 185 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhhccHHHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-EEEEECCCcccc-c
Confidence 358899999999999554 2433 4678888888777666 677777644221 0
Q ss_pred CcccCccccccCCCCCCccchhhHHHHHHHHHh
Q 007935 471 NVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT 503 (584)
Q Consensus 471 ~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt 503 (584)
... |-+.+.....|..++|||||||.+.-...
T Consensus 186 e~~-a~d~~vler~y~~~~di~~lg~~~~~~~~ 217 (232)
T PRK10359 186 QRK-AKDRIDLERHYGIKNEIKDLGYYLLIYKK 217 (232)
T ss_pred chh-hHHHHHHHhHhcccccccceeEeehHHHH
Confidence 001 11111222567789999999998876543
|
|
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.7e-11 Score=133.60 Aligned_cols=74 Identities=28% Similarity=0.368 Sum_probs=41.7
Q ss_pred CCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccC
Q 007935 138 NLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFS 217 (584)
Q Consensus 138 ~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~ 217 (584)
+|+.|+|++|+|+ .+|... +.|+ .|++++|+|++ +|..+ .+|+.|+|++|+|+..+..+..+.++..+.++
T Consensus 383 ~L~~LdLs~N~Lt-~LP~l~---s~L~-~LdLS~N~Lss-IP~l~---~~L~~L~Ls~NqLt~LP~sl~~L~~L~~LdLs 453 (788)
T PRK15387 383 GLKELIVSGNRLT-SLPVLP---SELK-ELMVSGNRLTS-LPMLP---SGLLSLSVYRNQLTRLPESLIHLSSETTVNLE 453 (788)
T ss_pred ccceEEecCCccc-CCCCcc---cCCC-EEEccCCcCCC-CCcch---hhhhhhhhccCcccccChHHhhccCCCeEECC
Confidence 5666666666666 355322 3455 66777777663 45432 34566667777666433334444555555666
Q ss_pred CCC
Q 007935 218 GNP 220 (584)
Q Consensus 218 ~n~ 220 (584)
+|+
T Consensus 454 ~N~ 456 (788)
T PRK15387 454 GNP 456 (788)
T ss_pred CCC
Confidence 665
|
|
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.6e-12 Score=137.90 Aligned_cols=129 Identities=33% Similarity=0.442 Sum_probs=107.0
Q ss_pred CCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCc-ccCCCCCCCeeecccCCCCCCchHHhhccccCccEE
Q 007935 89 NSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPD-RIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTL 167 (584)
Q Consensus 89 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l 167 (584)
..|+.|+|.+|.|+...-.-+.+.++|+.|+|++|+|. .+|+ .+.++..|+.|+||+|+|+ .+|..+.++..|+ +|
T Consensus 359 ~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~-~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~-tL 435 (1081)
T KOG0618|consen 359 AALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLN-SFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLH-TL 435 (1081)
T ss_pred HHHHHHHHhcCcccccchhhhccccceeeeeecccccc-cCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhH-HH
Confidence 34666888888887765556778899999999999998 5564 6789999999999999999 9999999999999 99
Q ss_pred EeccccCccccCccccCCCCCcEEEeecCCCccC-CCCCCCccccCCcccCCCCCC
Q 007935 168 NLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGE-IPQVGSLLNQGPTAFSGNPGL 222 (584)
Q Consensus 168 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-~p~~~~~~~~~~~~~~~n~~l 222 (584)
...+|++. ..| .+..+++|+.+|||.|+|+.. +|......++..++++||..+
T Consensus 436 ~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~l 489 (1081)
T KOG0618|consen 436 RAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTRL 489 (1081)
T ss_pred hhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCccc
Confidence 99999998 677 889999999999999999853 443333367788899999853
|
|
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.19 E-value=7.3e-13 Score=133.34 Aligned_cols=132 Identities=29% Similarity=0.426 Sum_probs=93.3
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
..++.|||+.|+++ .+|..+..| -|+.|.+++|+++ .+|..++.+..|..||.+.|++. .+|..++++.+|+.|++
T Consensus 121 ~~lt~l~ls~NqlS-~lp~~lC~l-pLkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~v 196 (722)
T KOG0532|consen 121 EALTFLDLSSNQLS-HLPDGLCDL-PLKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNV 196 (722)
T ss_pred hHHHHhhhccchhh-cCChhhhcC-cceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHH
Confidence 44666677777776 556666665 4677777777775 56777776677777777777776 56666777777777777
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ 204 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 204 (584)
..|++. .+|..+..| .|. .||+|.|+++ .+|-.|.+|..|++|-|.+|.|+.++.+
T Consensus 197 rRn~l~-~lp~El~~L-pLi-~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLqSPPAq 252 (722)
T KOG0532|consen 197 RRNHLE-DLPEELCSL-PLI-RLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQSPPAQ 252 (722)
T ss_pred hhhhhh-hCCHHHhCC-cee-eeecccCcee-ecchhhhhhhhheeeeeccCCCCCChHH
Confidence 777776 667777654 344 6888888887 7788888888888888888888765543
|
|
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.2e-10 Score=127.75 Aligned_cols=126 Identities=29% Similarity=0.430 Sum_probs=90.5
Q ss_pred EecCCCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCC
Q 007935 61 HCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLT 140 (584)
Q Consensus 61 ~c~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~ 140 (584)
.|...+.+.|+|++++++ .+|..+. ++|+.|+|++|+|+ .+|..+. ++|++|+|++|+|+ .+|..+. .+|+
T Consensus 174 ~Cl~~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~ 244 (754)
T PRK15370 174 DCLKNNKTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQ 244 (754)
T ss_pred hhcccCceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--cccc
Confidence 455566788888888887 4565553 47888888888887 4676654 47888888888887 5666543 4688
Q ss_pred eeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCC
Q 007935 141 HLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEI 202 (584)
Q Consensus 141 ~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 202 (584)
.|+|++|+++ .+|..+. ..|+ .|+|++|+|+ .+|+.+. ++|+.|+|++|+|++.+
T Consensus 245 ~L~Ls~N~L~-~LP~~l~--s~L~-~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~LP 299 (754)
T PRK15370 245 EMELSINRIT-ELPERLP--SALQ-SLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRTLP 299 (754)
T ss_pred EEECcCCccC-cCChhHh--CCCC-EEECcCCccC-ccccccC--CCCcEEECCCCccccCc
Confidence 8888888887 6777664 4677 8888888887 4666553 47888888888887643
|
|
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=8e-11 Score=128.43 Aligned_cols=51 Identities=20% Similarity=0.238 Sum_probs=34.1
Q ss_pred cCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCC
Q 007935 162 ALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 162 ~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
.|+ .|+|++|+|++ +|.. .++|+.|++++|.|++ +|.. ..++..+.+.+|.
T Consensus 383 ~L~-~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Lss-IP~l--~~~L~~L~Ls~Nq 433 (788)
T PRK15387 383 GLK-ELIVSGNRLTS-LPVL---PSELKELMVSGNRLTS-LPML--PSGLLSLSVYRNQ 433 (788)
T ss_pred ccc-eEEecCCcccC-CCCc---ccCCCEEEccCCcCCC-CCcc--hhhhhhhhhccCc
Confidence 566 78888888884 5543 3578899999999986 4532 2344455666665
|
|
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.13 E-value=5.1e-12 Score=127.35 Aligned_cols=148 Identities=30% Similarity=0.422 Sum_probs=133.7
Q ss_pred CEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecc
Q 007935 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLS 145 (584)
Q Consensus 66 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls 145 (584)
.|..+.|.+|.+. .+|..+.+|..|+.|||+.|+++ .+|..++.|+ |+.|-+++|+++ .+|..++.+..|..||.+
T Consensus 99 ~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s 174 (722)
T KOG0532|consen 99 SLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVS 174 (722)
T ss_pred HHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEecCccc-cCCcccccchhHHHhhhh
Confidence 3677888899998 88999999999999999999998 6899999998 999999999998 899999999999999999
Q ss_pred cCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCCC
Q 007935 146 SNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPG 221 (584)
Q Consensus 146 ~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~ 221 (584)
.|++. .+|..++.+.+|+ .|++..|++. .+|+++..|+ |..||+|+|+++-.+-.+..+..+..+.++.||.
T Consensus 175 ~nei~-slpsql~~l~slr-~l~vrRn~l~-~lp~El~~Lp-Li~lDfScNkis~iPv~fr~m~~Lq~l~LenNPL 246 (722)
T KOG0532|consen 175 KNEIQ-SLPSQLGYLTSLR-DLNVRRNHLE-DLPEELCSLP-LIRLDFSCNKISYLPVDFRKMRHLQVLQLENNPL 246 (722)
T ss_pred hhhhh-hchHHhhhHHHHH-HHHHhhhhhh-hCCHHHhCCc-eeeeecccCceeecchhhhhhhhheeeeeccCCC
Confidence 99998 9999999999999 9999999999 6788888665 8999999999997766777788888888888873
|
|
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.11 E-value=5.4e-12 Score=133.96 Aligned_cols=126 Identities=34% Similarity=0.443 Sum_probs=112.1
Q ss_pred CEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCccc-ccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPAN-LFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 66 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~-~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.++.|+|.+|.|+...-+-|-+..+|+.|+|++|.|. .+|+. +.++..|+.|+||+|+++ .+|..+.++..|++|..
T Consensus 360 ~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~-~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~a 437 (1081)
T KOG0618|consen 360 ALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLN-SFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRA 437 (1081)
T ss_pred HHHHHHHhcCcccccchhhhccccceeeeeecccccc-cCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhh
Confidence 5888999999999888788999999999999999997 46654 678999999999999999 89999999999999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCcc-ccCccccCCCCCcEEEeecCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSG-QIPEMYGHFPVMVSLDLRNNN 197 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~-~~p~~~~~l~~L~~L~l~~N~ 197 (584)
.+|++. .+| .+..++.|+ .+|+|.|+|+- .+|.... .++|++|||++|.
T Consensus 438 hsN~l~-~fP-e~~~l~qL~-~lDlS~N~L~~~~l~~~~p-~p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 438 HSNQLL-SFP-ELAQLPQLK-VLDLSCNNLSEVTLPEALP-SPNLKYLDLSGNT 487 (1081)
T ss_pred cCCcee-ech-hhhhcCcce-EEecccchhhhhhhhhhCC-CcccceeeccCCc
Confidence 999998 899 899999999 99999999974 3454433 3899999999997
|
|
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=99.10 E-value=3.2e-10 Score=132.65 Aligned_cols=153 Identities=22% Similarity=0.244 Sum_probs=85.8
Q ss_pred CEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecc
Q 007935 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLS 145 (584)
Q Consensus 66 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls 145 (584)
+++.|+|++++..+.+| .++.+++|+.|+|++|.....+|..+.++++|+.|+|++|...+.+|..+ ++++|+.|+|+
T Consensus 635 ~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Ls 712 (1153)
T PLN03210 635 GLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYRLNLS 712 (1153)
T ss_pred CCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCEEeCC
Confidence 45666666554333444 25556666666666655545566666666666666666654333455433 34444444444
Q ss_pred c---------------------CCCCCCchHHh------------------------------hccccCccEEEeccccC
Q 007935 146 S---------------------NLLNGSLPEFL------------------------------LDLRALTGTLNLSFNQF 174 (584)
Q Consensus 146 ~---------------------N~l~~~~p~~~------------------------------~~l~~L~~~l~l~~N~l 174 (584)
+ |.++ .+|..+ ...++|+ .|+|++|..
T Consensus 713 gc~~L~~~p~~~~nL~~L~L~~n~i~-~lP~~~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~-~L~Ls~n~~ 790 (1153)
T PLN03210 713 GCSRLKSFPDISTNISWLDLDETAIE-EFPSNLRLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLT-RLFLSDIPS 790 (1153)
T ss_pred CCCCccccccccCCcCeeecCCCccc-cccccccccccccccccccchhhccccccccchhhhhccccch-heeCCCCCC
Confidence 3 3332 233221 0113455 667777766
Q ss_pred ccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCCCC
Q 007935 175 SGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGL 222 (584)
Q Consensus 175 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~l 222 (584)
.+.+|..++++++|+.|+|++|..-+.+|....+.++..+.++++..+
T Consensus 791 l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~~L~sL~~L~Ls~c~~L 838 (1153)
T PLN03210 791 LVELPSSIQNLHKLEHLEIENCINLETLPTGINLESLESLDLSGCSRL 838 (1153)
T ss_pred ccccChhhhCCCCCCEEECCCCCCcCeeCCCCCccccCEEECCCCCcc
Confidence 667777788888888888887655555664445555666666665443
|
syringae 6; Provisional |
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.2e-10 Score=127.79 Aligned_cols=97 Identities=28% Similarity=0.511 Sum_probs=62.3
Q ss_pred CEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecc
Q 007935 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLS 145 (584)
Q Consensus 66 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls 145 (584)
+++.|+|++|+|+ .+|..+. .+|+.|+|++|++. .+|..+. ++|+.|+|++|+|+ .+|..+. .+|+.|+|+
T Consensus 221 nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls 291 (754)
T PRK15370 221 NIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVY 291 (754)
T ss_pred CCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECC
Confidence 6788888888887 4565443 36778888888777 4666554 46777777777777 4666553 467777777
Q ss_pred cCCCCCCchHHhhccccCccEEEeccccCc
Q 007935 146 SNLLNGSLPEFLLDLRALTGTLNLSFNQFS 175 (584)
Q Consensus 146 ~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~ 175 (584)
+|+|+ .+|..+. ..|+ .|++++|+|+
T Consensus 292 ~N~Lt-~LP~~lp--~sL~-~L~Ls~N~Lt 317 (754)
T PRK15370 292 DNSIR-TLPAHLP--SGIT-HLNVQSNSLT 317 (754)
T ss_pred CCccc-cCcccch--hhHH-HHHhcCCccc
Confidence 77776 4454332 2333 4445555554
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.5e-09 Score=106.82 Aligned_cols=215 Identities=18% Similarity=0.163 Sum_probs=140.1
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCC----CceeeeeEEE-EeCCcee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQH----PNIVRLKAFY-YANDEKL 421 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~H----pnIV~l~g~~-~~~~~~~ 421 (584)
...||+|+||.||++...... ...+|+|.......... ..+..|+.++..+.+ +++.++++.. ..++..+
T Consensus 23 ~~~iG~G~fG~V~~v~~~~~~----~~~~a~K~e~~~~~~~~-~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~ 97 (322)
T KOG1164|consen 23 GKKIGEGGFGAVYLVSDKSEK----NKEYAKKLEKKELGSKP-SVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNF 97 (322)
T ss_pred eeeccccCCceEEEEEecCCC----CeeEEEEEEEecccCCC-ccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeE
Confidence 467999999999999987753 25789888876433222 267889999999963 6899999888 4777899
Q ss_pred EeeecccCCcHHH---------------------------HHhc--ccccccCCCCcccccc-----CeEEecCCCcc--
Q 007935 422 LISDFIRNGSLYA---------------------------ALHG--FGLNRLLPGTSKVTKN-----ETIVTSGTGSR-- 465 (584)
Q Consensus 422 lV~Ey~~~GsL~~---------------------------~L~~--~g~~~~~~~~~~i~~~-----~~~~~~~~~~~-- 465 (584)
+||+.+ |-+|.+ +||+ +-|+|+++.|..+... ..+...|+|..
T Consensus 98 iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~ 176 (322)
T KOG1164|consen 98 IVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARR 176 (322)
T ss_pred EEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCcc
Confidence 999987 456643 3343 3578888877655433 12333444321
Q ss_pred -------------------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHh
Q 007935 466 -------------------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF 526 (584)
Q Consensus 466 -------------------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~ 526 (584)
...||..|.++.. ..+...+.+.|+||++-++.|+..|..||........ .... ....
T Consensus 177 ~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~-H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~-~~~~-~~~~ 253 (322)
T KOG1164|consen 177 FKYVGDSGGNLRPPRPQKGLFRGTLRYASINV-HLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL-KSKF-EKDP 253 (322)
T ss_pred ccccCCCCcccccCCCCccCCCCccccccHHH-hCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch-HHHH-HHHh
Confidence 1238999999998 5557889999999999999999999999975432211 1111 1111
Q ss_pred hcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhh
Q 007935 527 RERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581 (584)
Q Consensus 527 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 581 (584)
.... ... ... .....+.++...+-..+...+|....+...|++.
T Consensus 254 ~~~~-~~~-----~~~-----~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~ 297 (322)
T KOG1164|consen 254 RKLL-TDR-----FGD-----LKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDV 297 (322)
T ss_pred hhhc-ccc-----ccC-----CChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHH
Confidence 1111 010 000 0011222333334447888999999998887654
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.6e-10 Score=103.63 Aligned_cols=110 Identities=32% Similarity=0.351 Sum_probs=40.2
Q ss_pred ccCCCCCCEEEccCCCCCCCCccccc-CCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHh-hcccc
Q 007935 85 LGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFL-LDLRA 162 (584)
Q Consensus 85 ~~~l~~L~~L~l~~n~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~-~~l~~ 162 (584)
+.+...+++|+|++|.|+. + +.+. .+.+|+.|+|++|+|+. ++ .+..++.|+.|+|++|+|+ .+++.+ ..+++
T Consensus 15 ~~n~~~~~~L~L~~n~I~~-I-e~L~~~l~~L~~L~Ls~N~I~~-l~-~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~ 89 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQIST-I-ENLGATLDKLEVLDLSNNQITK-LE-GLPGLPRLKTLDLSNNRIS-SISEGLDKNLPN 89 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHHHHH-TT
T ss_pred ccccccccccccccccccc-c-cchhhhhcCCCEEECCCCCCcc-cc-CccChhhhhhcccCCCCCC-ccccchHHhCCc
Confidence 4455567888888888874 3 3565 57888899999998873 43 4777888999999999998 565444 46888
Q ss_pred CccEEEeccccCcccc-CccccCCCCCcEEEeecCCCcc
Q 007935 163 LTGTLNLSFNQFSGQI-PEMYGHFPVMVSLDLRNNNLSG 200 (584)
Q Consensus 163 L~~~l~l~~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~ 200 (584)
|+ .|+|++|+|...- -..+..+++|+.|+|.+|.++.
T Consensus 90 L~-~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~ 127 (175)
T PF14580_consen 90 LQ-ELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCE 127 (175)
T ss_dssp ---EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGG
T ss_pred CC-EEECcCCcCCChHHhHHHHcCCCcceeeccCCcccc
Confidence 88 8999999886421 2456678889999999998874
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=99.05 E-value=7.4e-11 Score=105.70 Aligned_cols=120 Identities=29% Similarity=0.397 Sum_probs=51.4
Q ss_pred CEEEEEcCCCCCcccCCcccc-CCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCccc-CCCCCCCeee
Q 007935 66 RVTSLYLPNRNLTGYMPSELG-LLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRI-KTLKNLTHLD 143 (584)
Q Consensus 66 ~v~~l~l~~~~l~~~~~~~~~-~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~-~~l~~L~~L~ 143 (584)
++++|+|.+|+|+. + +.++ .+.+|+.|+|++|.|+. ++ .+..++.|++|+|++|+|+ .+...+ ..+++|+.|+
T Consensus 20 ~~~~L~L~~n~I~~-I-e~L~~~l~~L~~L~Ls~N~I~~-l~-~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~L~~L~ 94 (175)
T PF14580_consen 20 KLRELNLRGNQIST-I-ENLGATLDKLEVLDLSNNQITK-LE-GLPGLPRLKTLDLSNNRIS-SISEGLDKNLPNLQELY 94 (175)
T ss_dssp ------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHHHHH-TT--EEE
T ss_pred cccccccccccccc-c-cchhhhhcCCCEEECCCCCCcc-cc-CccChhhhhhcccCCCCCC-ccccchHHhCCcCCEEE
Confidence 57999999999984 3 3466 58899999999999985 44 6888999999999999999 455444 4689999999
Q ss_pred cccCCCCCCc-hHHhhccccCccEEEeccccCccccCc----cccCCCCCcEEE
Q 007935 144 LSSNLLNGSL-PEFLLDLRALTGTLNLSFNQFSGQIPE----MYGHFPVMVSLD 192 (584)
Q Consensus 144 ls~N~l~~~~-p~~~~~l~~L~~~l~l~~N~l~~~~p~----~~~~l~~L~~L~ 192 (584)
|++|+|...- =..+..++.|+ .|+|.+|+++.. +. .+..+|+|+.||
T Consensus 95 L~~N~I~~l~~l~~L~~l~~L~-~L~L~~NPv~~~-~~YR~~vi~~lP~Lk~LD 146 (175)
T PF14580_consen 95 LSNNKISDLNELEPLSSLPKLR-VLSLEGNPVCEK-KNYRLFVIYKLPSLKVLD 146 (175)
T ss_dssp -TTS---SCCCCGGGGG-TT---EEE-TT-GGGGS-TTHHHHHHHH-TT-SEET
T ss_pred CcCCcCCChHHhHHHHcCCCcc-eeeccCCcccch-hhHHHHHHHHcChhheeC
Confidence 9999997321 14577899999 999999999843 32 345688888887
|
|
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.04 E-value=2.4e-11 Score=113.29 Aligned_cols=105 Identities=30% Similarity=0.382 Sum_probs=50.2
Q ss_pred CCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEE
Q 007935 88 LNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTL 167 (584)
Q Consensus 88 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l 167 (584)
.+.|+.||||+|.|+ .+.++..-++.++.|++|+|.|. .+ +.+..|++|+.||||+|.++ .+..+-..|-+.+ +|
T Consensus 283 Wq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v-~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIK-tL 357 (490)
T KOG1259|consen 283 WQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TV-QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIK-TL 357 (490)
T ss_pred Hhhhhhccccccchh-hhhhhhhhccceeEEecccccee-ee-hhhhhcccceEeecccchhH-hhhhhHhhhcCEe-ee
Confidence 344555555555554 24444444455555555555554 22 12444555555555555554 4444444444444 55
Q ss_pred EeccccCccccCccccCCCCCcEEEeecCCCc
Q 007935 168 NLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLS 199 (584)
Q Consensus 168 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 199 (584)
.|+.|.+.. + ..++.+-+|..||+++|+|.
T Consensus 358 ~La~N~iE~-L-SGL~KLYSLvnLDl~~N~Ie 387 (490)
T KOG1259|consen 358 KLAQNKIET-L-SGLRKLYSLVNLDLSSNQIE 387 (490)
T ss_pred ehhhhhHhh-h-hhhHhhhhheeccccccchh
Confidence 555554431 1 12334444555555555553
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.9e-09 Score=98.72 Aligned_cols=153 Identities=16% Similarity=0.120 Sum_probs=107.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcc---hhhHhHHHHHHHHHhcC-CCceeeeeEEEEeCCceeE
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT---WRFKDFESEVEAIARVQ-HPNIVRLKAFYYANDEKLL 422 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~---~~~~~f~~Ei~~l~~l~-HpnIV~l~g~~~~~~~~~l 422 (584)
...|++|+||+||.+.. .+ ..++.+.+....-. -....|.+|+++|++++ |++|++++++ +..++
T Consensus 7 ~~~l~~~~f~~v~~~~~-~~------~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~l 75 (218)
T PRK12274 7 NEPLKSDTFGRILLVRG-GE------RKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHL 75 (218)
T ss_pred ceeecCCCcceEEEeec-CC------ceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEE
Confidence 45799999999997665 22 67887777654221 11236889999999994 5889999886 45799
Q ss_pred eeecccCCcHHHH------------------Hhccc--cccc-CCCCccccccCeEEecCCCcccc--------------
Q 007935 423 ISDFIRNGSLYAA------------------LHGFG--LNRL-LPGTSKVTKNETIVTSGTGSRIS-------------- 467 (584)
Q Consensus 423 V~Ey~~~GsL~~~------------------L~~~g--~~~~-~~~~~~i~~~~~~~~~~~~~~~~-------------- 467 (584)
+|||++|.+|.+. +|+.| |+|+ ++.|+.+..++.++..||+....
T Consensus 76 vmeyI~G~~L~~~~~~~~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~L~~r 155 (218)
T PRK12274 76 DRSYLAGAAMYQRPPRGDLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRLLARE 155 (218)
T ss_pred EEeeecCccHHhhhhhhhHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHHHHHH
Confidence 9999999988532 34444 5778 57788777677677777764321
Q ss_pred ----------cCCCcccCccccccCCCCC-CccchhhHHHHHHHHHhCCCCCCC
Q 007935 468 ----------AISNVYLAPEARIYGSKFT-QKCDVYSFGIVLLEILTGRLPDAG 510 (584)
Q Consensus 468 ----------~gt~~y~aPE~~~~~~~~~-~ksDV~SfGvvl~ElltG~~p~~~ 510 (584)
.+++.|++|+....-...+ ...+.++-|.-+|.++||+.++.+
T Consensus 156 Dl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 156 DLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred HHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 2466677776421111222 466899999999999999988643
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.01 E-value=9.7e-10 Score=106.58 Aligned_cols=225 Identities=17% Similarity=0.235 Sum_probs=135.6
Q ss_pred cccchhhHhhhcceeceeecCceEEEEEecCCCC-----------------------C-------CCceEEEEEEecCCC
Q 007935 335 FSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSG-----------------------M-------GAPTVVAVRRLTEGD 384 (584)
Q Consensus 335 ~~~~~~~l~~~~~~~iG~G~~g~Vy~~~~~~~~~-----------------------~-------~~~~~vAvK~l~~~~ 384 (584)
..|+++|.+ .+..||+|-...||.+.+...+. . ...-+.|+|.+-.-+
T Consensus 152 skFtiddye--iG~~igkGC~AaVY~A~~~~dg~~le~~~~t~~~pgf~p~ts~p~e~~q~~~p~~~aFPLAiKmMfN~~ 229 (598)
T KOG4158|consen 152 SKFTIDDYE--IGEFIGKGCNAAVYSARLANDGSDLESSGNTHYGPGFNPVTSIPAEIPQVSKPAQKAFPLAIKMMFNFE 229 (598)
T ss_pred cccchhhhc--ccchhhccchhhhhhhhcCCCcccccccCCCCcCCCcCCCcCCcccCCcccCccccccchHHHHhcccc
Confidence 457777765 57789999999999998876321 0 001246777764331
Q ss_pred cchh----hHhHHHHH------HH--------HHh--------cCCCceeeeeEEEEeC---------------------
Q 007935 385 ATWR----FKDFESEV------EA--------IAR--------VQHPNIVRLKAFYYAN--------------------- 417 (584)
Q Consensus 385 ~~~~----~~~f~~Ei------~~--------l~~--------l~HpnIV~l~g~~~~~--------------------- 417 (584)
.+.. .+..-+|. .. .+. -+|||||++.++|.+.
T Consensus 230 ~~s~~~~iL~sM~~ElvPa~~~a~~~e~~~~t~R~l~nqtvhLa~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p 309 (598)
T KOG4158|consen 230 HDSGDAHILKSMGNELVPAPNAAKLLEGQMGTFRPLPNQTVHLAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYP 309 (598)
T ss_pred cCCchHHHHHHhhhhccCcchhhhhcccccceeeeCCCCCcccCCCCCEEeehhhhhhhhccCCchhhhCcccccceecc
Confidence 1111 12222232 01 111 2699999999987652
Q ss_pred ------CceeEeeecccCCcHHHHH------------------------hccc--ccccCCCCcccccc----CeEEecC
Q 007935 418 ------DEKLLISDFIRNGSLYAAL------------------------HGFG--LNRLLPGTSKVTKN----ETIVTSG 461 (584)
Q Consensus 418 ------~~~~lV~Ey~~~GsL~~~L------------------------~~~g--~~~~~~~~~~i~~~----~~~~~~~ 461 (584)
...|+||.-.+. +|.+|| |.+| |+|++.+|+.+-.+ -..+..|
T Consensus 310 ~g~g~~~tlylvMkrY~~-tLr~yl~~~~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaD 388 (598)
T KOG4158|consen 310 SGAGEPKTLYLVMKRYRQ-TLREYLWTRHRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVAD 388 (598)
T ss_pred cccCCCceEEEehhcchh-hHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcc
Confidence 236888876654 665444 4444 57788888875444 2344456
Q ss_pred CCccc-----------------ccCCCcccCcccccc--CCC--C-CCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHH
Q 007935 462 TGSRI-----------------SAISNVYLAPEARIY--GSK--F-TQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLE 519 (584)
Q Consensus 462 ~~~~~-----------------~~gt~~y~aPE~~~~--~~~--~-~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~ 519 (584)
||... ..|...-||||+... |.. . =.|+|.|+.|.+.||+++...||.....-.-+..
T Consensus 389 FGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r 468 (598)
T KOG4158|consen 389 FGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTR 468 (598)
T ss_pred cceeeeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechh
Confidence 55321 134556899998532 111 1 1589999999999999999999986322222222
Q ss_pred HHHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHH
Q 007935 520 SLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 578 (584)
Q Consensus 520 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L 578 (584)
.+-+ .+-+++++.+.|.+... +...++.||.+|++..-....|
T Consensus 469 ~Yqe---~qLPalp~~vpp~~rql-------------V~~lL~r~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 469 TYQE---SQLPALPSRVPPVARQL-------------VFDLLKRDPSKRVSPNIAANVL 511 (598)
T ss_pred hhhh---hhCCCCcccCChHHHHH-------------HHHHhcCCccccCCccHHHhHH
Confidence 2211 12234566677766554 4448999999999877655544
|
|
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=99.01 E-value=9.7e-11 Score=118.30 Aligned_cols=135 Identities=24% Similarity=0.296 Sum_probs=84.3
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCC---CCEEEccCCCCCC----CCcccccCC-CCCCEEecCCCcccCC----CCcc
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNS---LTRLSLASNNFSK----PIPANLFNA-TNLVYLDLAHNSFCGP----IPDR 132 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~---L~~L~l~~n~l~~----~~p~~~~~l-~~L~~L~l~~N~l~~~----~p~~ 132 (584)
.+++.|+|++|.+.+..+..+..+.+ |++|++++|++++ .+...+..+ ++|+.|+|++|.+++. ++..
T Consensus 81 ~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~ 160 (319)
T cd00116 81 CGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKA 160 (319)
T ss_pred CceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHH
Confidence 36777777777776555555555544 7777777777763 223344555 6777777777777632 2334
Q ss_pred cCCCCCCCeeecccCCCCCC----chHHhhccccCccEEEeccccCccc----cCccccCCCCCcEEEeecCCCcc
Q 007935 133 IKTLKNLTHLDLSSNLLNGS----LPEFLLDLRALTGTLNLSFNQFSGQ----IPEMYGHFPVMVSLDLRNNNLSG 200 (584)
Q Consensus 133 ~~~l~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~~l~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~ 200 (584)
+..+.+|+.|+|++|.+++. ++..+..++.|+ .|+|++|.+++. +...+..+++|+.|++++|.+++
T Consensus 161 ~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~-~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~ 235 (319)
T cd00116 161 LRANRDLKELNLANNGIGDAGIRALAEGLKANCNLE-VLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTD 235 (319)
T ss_pred HHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCC-EEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCch
Confidence 55666777777777777642 333444555777 777777776532 33445566677777777777664
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.8e-09 Score=104.31 Aligned_cols=194 Identities=18% Similarity=0.247 Sum_probs=113.1
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC--CcchhhHhHHHHHHHHHhcCC-----------CceeeeeE
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG--DATWRFKDFESEVEAIARVQH-----------PNIVRLKA 412 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~~f~~Ei~~l~~l~H-----------pnIV~l~g 412 (584)
.+..||.|+++.||.+++..++ +.+|||..... ......+++.+|.-....+.+ +-++.+ +
T Consensus 16 ~~~~i~~g~~~~v~~v~d~~t~-----~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~-d 89 (288)
T PF14531_consen 16 RGRIIGKGGFSIVFEVTDVETG-----EEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPL-D 89 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTTT-----EEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---S-E
T ss_pred EccccccCCceEEEEEEEccCC-----ceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeee-E
Confidence 3568999999999999999877 89999988654 233345778888766655433 222222 2
Q ss_pred EEE---------eCC--------ceeEeeecccCCcHHHH--------------------------------Hhccc--c
Q 007935 413 FYY---------AND--------EKLLISDFIRNGSLYAA--------------------------------LHGFG--L 441 (584)
Q Consensus 413 ~~~---------~~~--------~~~lV~Ey~~~GsL~~~--------------------------------L~~~g--~ 441 (584)
... ... ..+++|+-+. +||.+. ||..| |
T Consensus 90 ~~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVH 168 (288)
T PF14531_consen 90 LLRIPGKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVH 168 (288)
T ss_dssp EEEETTS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEE
T ss_pred EEEEcCCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEe
Confidence 221 111 2467777764 476433 34444 4
Q ss_pred cccCCCCccccccCeEEecCCCccc--------ccCCCcccCccccccC-------CCCCCccchhhHHHHHHHHHhCCC
Q 007935 442 NRLLPGTSKVTKNETIVTSGTGSRI--------SAISNVYLAPEARIYG-------SKFTQKCDVYSFGIVLLEILTGRL 506 (584)
Q Consensus 442 ~~~~~~~~~i~~~~~~~~~~~~~~~--------~~gt~~y~aPE~~~~~-------~~~~~ksDV~SfGvvl~ElltG~~ 506 (584)
.++.+.|..+..++.+...+++.-. ...+..|.+||..... ..++.+.|.|++|+++|.|..|+.
T Consensus 169 gdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~l 248 (288)
T PF14531_consen 169 GDIKPENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRL 248 (288)
T ss_dssp ST-SGGGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-
T ss_pred cccceeeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccC
Confidence 6666777777777777777764322 2345668999974321 247889999999999999999999
Q ss_pred CCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCC
Q 007935 507 PDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFR 568 (584)
Q Consensus 507 p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~R 568 (584)
||........... .+.. .. +-.+.+..++...++.+|++|
T Consensus 249 Pf~~~~~~~~~~~-----------~f~~----------C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 249 PFGLSSPEADPEW-----------DFSR----------CR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp STCCCGGGSTSGG-----------GGTT----------SS----HHHHHHHHHHT-SSGGGS
T ss_pred CCCCCCccccccc-----------cchh----------cC-CcCHHHHHHHHHHccCCcccC
Confidence 9985432211100 0000 01 223345567778999999988
|
|
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=98.97 E-value=3e-09 Score=124.66 Aligned_cols=132 Identities=22% Similarity=0.265 Sum_probs=87.3
Q ss_pred CEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecc
Q 007935 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLS 145 (584)
Q Consensus 66 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls 145 (584)
.++.|++.++.+. .+|..| .+.+|+.|+|++|++. .+|..+..+++|+.|+|++|...+.+|. +..+++|+.|+|+
T Consensus 590 ~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~ 665 (1153)
T PLN03210 590 KLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLS 665 (1153)
T ss_pred ccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEec
Confidence 4666666666654 556555 4567777777777776 3666667777777777777654456663 6667777777777
Q ss_pred cCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCC
Q 007935 146 SNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIP 203 (584)
Q Consensus 146 ~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 203 (584)
+|.....+|..+.++++|+ .|++++|..-..+|..+ ++++|+.|+|++|...+.+|
T Consensus 666 ~c~~L~~lp~si~~L~~L~-~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p 721 (1153)
T PLN03210 666 DCSSLVELPSSIQYLNKLE-DLDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFP 721 (1153)
T ss_pred CCCCccccchhhhccCCCC-EEeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccc
Confidence 7665557777777777777 77777754444566554 56677777777765555554
|
syringae 6; Provisional |
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.97 E-value=8.2e-10 Score=119.47 Aligned_cols=188 Identities=20% Similarity=0.250 Sum_probs=116.2
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
+.+.|..|+||.||.++++... +.+|.| +.+. ..+.|- ++.....|.+| |-|.+. +=.+-
T Consensus 87 ~IklisngAygavylvrh~~tr-----qrfa~k-iNkq------~lilRn--ilt~a~npfvv---gDc~tl---lk~~g 146 (1205)
T KOG0606|consen 87 TIKLISNGAYGAVYLVRHKETR-----QRFAMK-INKQ------NLILRN--ILTFAGNPFVV---GDCATL---LKNIG 146 (1205)
T ss_pred eeEeeccCCCCceeeeeccccc-----cchhhc-cccc------chhhhc--cccccCCccee---chhhhh---cccCC
Confidence 4578999999999999988765 788884 4332 112221 44555666666 322210 00000
Q ss_pred cccCCc-H-HHHHhcccc--cccCCCCccccccCeEEecCCC--------------------------cccccCCCcccC
Q 007935 426 FIRNGS-L-YAALHGFGL--NRLLPGTSKVTKNETIVTSGTG--------------------------SRISAISNVYLA 475 (584)
Q Consensus 426 y~~~Gs-L-~~~L~~~g~--~~~~~~~~~i~~~~~~~~~~~~--------------------------~~~~~gt~~y~a 475 (584)
-.+.+. | .+|+|.+|+ ++++++|..|..-+.++..+++ ....+||+.|+|
T Consensus 147 ~lPvdmvla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyia 226 (1205)
T KOG0606|consen 147 PLPVDMVLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIA 226 (1205)
T ss_pred CCcchhhHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccC
Confidence 011111 1 478888874 6777777766555555544443 234589999999
Q ss_pred ccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHH
Q 007935 476 PEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFH 555 (584)
Q Consensus 476 PE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 555 (584)
||++.. +.|...+|.|++|+++||.+.|..||++. .-++++...+.....+++. |+.... +..+
T Consensus 227 PeVilr-qgygkpvdwwamGiIlyeFLVgcvpffGd-----tpeelfg~visd~i~wpE~-dea~p~---------Ea~d 290 (1205)
T KOG0606|consen 227 PEVILR-QGYGKPVDWWAMGIILYEFLVGCVPFFGD-----TPEELFGQVISDDIEWPEE-DEALPP---------EAQD 290 (1205)
T ss_pred hhhhhh-hccCCCccHHHHHHHHHHHheeeeeccCC-----CHHHHHhhhhhhhcccccc-CcCCCH---------HHHH
Confidence 999766 67999999999999999999999999853 2344444444444333333 322222 2223
Q ss_pred HHhcccCCCCCCCC
Q 007935 556 IALNCTELDPEFRP 569 (584)
Q Consensus 556 l~~~Cl~~~P~~RP 569 (584)
++...++.+|..|-
T Consensus 291 li~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 291 LIEQLLRQNPLCRL 304 (1205)
T ss_pred HHHHHHHhChHhhc
Confidence 45557778888883
|
|
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=98.96 E-value=2.4e-10 Score=115.35 Aligned_cols=154 Identities=25% Similarity=0.322 Sum_probs=111.0
Q ss_pred CEEEEEcCCCCCcc----cCCccccCC-CCCCEEEccCCCCCCC----CcccccCCCCCCEEecCCCcccCC----CCcc
Q 007935 66 RVTSLYLPNRNLTG----YMPSELGLL-NSLTRLSLASNNFSKP----IPANLFNATNLVYLDLAHNSFCGP----IPDR 132 (584)
Q Consensus 66 ~v~~l~l~~~~l~~----~~~~~~~~l-~~L~~L~l~~n~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~----~p~~ 132 (584)
+++.|++++|++++ .+...+..+ ++|+.|+|++|++++. ++..+..+++|+.|+|++|.+++. ++..
T Consensus 109 ~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~ 188 (319)
T cd00116 109 SLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEG 188 (319)
T ss_pred cccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHH
Confidence 49999999999883 334556677 8999999999999853 344566778999999999999852 3445
Q ss_pred cCCCCCCCeeecccCCCCCC----chHHhhccccCccEEEeccccCccccCcccc-----CCCCCcEEEeecCCCc--cC
Q 007935 133 IKTLKNLTHLDLSSNLLNGS----LPEFLLDLRALTGTLNLSFNQFSGQIPEMYG-----HFPVMVSLDLRNNNLS--GE 201 (584)
Q Consensus 133 ~~~l~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~-----~l~~L~~L~l~~N~l~--~~ 201 (584)
+..+++|+.|+|++|.+++. ++..+..+++|+ .|++++|++++.....+. ..+.|+.|++++|.++ +.
T Consensus 189 l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~-~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~ 267 (319)
T cd00116 189 LKANCNLEVLDLNNNGLTDEGASALAETLASLKSLE-VLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGA 267 (319)
T ss_pred HHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCC-EEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHH
Confidence 56678999999999998744 344566778899 999999999863332222 2378999999999987 21
Q ss_pred --CC-CCCCccccCCcccCCCC
Q 007935 202 --IP-QVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 202 --~p-~~~~~~~~~~~~~~~n~ 220 (584)
+. ....+.++..+.+++|.
T Consensus 268 ~~l~~~~~~~~~L~~l~l~~N~ 289 (319)
T cd00116 268 KDLAEVLAEKESLLELDLRGNK 289 (319)
T ss_pred HHHHHHHhcCCCccEEECCCCC
Confidence 11 11222455566677765
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.95 E-value=8.8e-11 Score=109.55 Aligned_cols=131 Identities=29% Similarity=0.373 Sum_probs=107.5
Q ss_pred CEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecc
Q 007935 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLS 145 (584)
Q Consensus 66 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls 145 (584)
-+++|||++|.|+ .+..+..-++.++.|++|+|.|.. +. ++..+++|+.||||+|.++ .+-.+-.+|.+.+.|.|+
T Consensus 285 ~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~-v~-nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~La 360 (490)
T KOG1259|consen 285 ELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRT-VQ-NLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKLA 360 (490)
T ss_pred hhhhccccccchh-hhhhhhhhccceeEEeccccceee-eh-hhhhcccceEeecccchhH-hhhhhHhhhcCEeeeehh
Confidence 4788999999998 667788888999999999999984 33 4889999999999999998 566666788899999999
Q ss_pred cCCCCCCchHHhhccccCccEEEeccccCccc-cCccccCCCCCcEEEeecCCCccCCC
Q 007935 146 SNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQ-IPEMYGHFPVMVSLDLRNNNLSGEIP 203 (584)
Q Consensus 146 ~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p 203 (584)
.|.+. .+ ..+..|-+|. .||+++|+|... -...+|++|-|+.|.|.+|.+.+.+.
T Consensus 361 ~N~iE-~L-SGL~KLYSLv-nLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vd 416 (490)
T KOG1259|consen 361 QNKIE-TL-SGLRKLYSLV-NLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVD 416 (490)
T ss_pred hhhHh-hh-hhhHhhhhhe-eccccccchhhHHHhcccccccHHHHHhhcCCCccccch
Confidence 99885 22 3477788888 999999998632 13468899999999999999987654
|
|
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.92 E-value=5.4e-10 Score=116.37 Aligned_cols=148 Identities=39% Similarity=0.577 Sum_probs=102.2
Q ss_pred CEEEEEcCCCCCcccCCccccCCC-CCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 66 RVTSLYLPNRNLTGYMPSELGLLN-SLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 66 ~v~~l~l~~~~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.++.|++.+|+++ .+++....+. +|+.|++++|++. .+|..+..+++|+.|++++|+++ .+|...+.+++|+.|++
T Consensus 117 ~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~l 193 (394)
T COG4886 117 NLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDL 193 (394)
T ss_pred ceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhheec
Confidence 5888888888888 6677777774 8888888888887 46677888888888888888888 66766667888888888
Q ss_pred ccCCCCCCchHHhhccccCccEEEecccc-----------------------CccccCccccCCCCCcEEEeecCCCccC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQ-----------------------FSGQIPEMYGHFPVMVSLDLRNNNLSGE 201 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~-----------------------l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 201 (584)
++|+++ .+|.....+..|. .|.+++|+ +. .++..++.+++++.|++++|.++..
T Consensus 194 s~N~i~-~l~~~~~~~~~L~-~l~~~~N~~~~~~~~~~~~~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~~s~n~i~~i 270 (394)
T COG4886 194 SGNKIS-DLPPEIELLSALE-ELDLSNNSIIELLSSLSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQISSI 270 (394)
T ss_pred cCCccc-cCchhhhhhhhhh-hhhhcCCcceecchhhhhcccccccccCCceee-eccchhccccccceecccccccccc
Confidence 888887 7777654455555 56666663 32 1244455555566666666666543
Q ss_pred CCCCCCccccCCcccCCCC
Q 007935 202 IPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 202 ~p~~~~~~~~~~~~~~~n~ 220 (584)
.+ .+.+.++..+.+++|.
T Consensus 271 ~~-~~~~~~l~~L~~s~n~ 288 (394)
T COG4886 271 SS-LGSLTNLRELDLSGNS 288 (394)
T ss_pred cc-ccccCccCEEeccCcc
Confidence 33 4445555555555554
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=98.90 E-value=2.8e-09 Score=98.41 Aligned_cols=111 Identities=13% Similarity=0.166 Sum_probs=76.5
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcch-h-------hHhH-----------------HHHHHHHHhc
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATW-R-------FKDF-----------------ESEVEAIARV 402 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~-~-------~~~f-----------------~~Ei~~l~~l 402 (584)
..||+|++|.||+|...++ +.||||+++...... . ...| .+|++.+.++
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g------~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 76 (190)
T cd05147 3 GCISTGKEANVYHATTANG------EERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRL 76 (190)
T ss_pred CccccccceEEEEEECCCC------CEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHH
Confidence 4699999999999998744 799999997652110 0 1222 3499999999
Q ss_pred CCCceeeeeEEEEeCCceeEeeecccCCcHH-------------------------HHH-hc--ccccccCCCCcccccc
Q 007935 403 QHPNIVRLKAFYYANDEKLLISDFIRNGSLY-------------------------AAL-HG--FGLNRLLPGTSKVTKN 454 (584)
Q Consensus 403 ~HpnIV~l~g~~~~~~~~~lV~Ey~~~GsL~-------------------------~~L-~~--~g~~~~~~~~~~i~~~ 454 (584)
.|+++.....+.. ...+|||||++++++. +++ |+ .-|+|+++.|+.+. +
T Consensus 77 ~~~~v~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~ 153 (190)
T cd05147 77 VTAGIPCPEPILL--KSHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-D 153 (190)
T ss_pred HHCCCCCCcEEEe--cCCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-C
Confidence 8887754433322 2348999999987652 344 34 34688888888776 4
Q ss_pred CeEEecCCCcccc
Q 007935 455 ETIVTSGTGSRIS 467 (584)
Q Consensus 455 ~~~~~~~~~~~~~ 467 (584)
+.++..|||....
T Consensus 154 ~~v~LiDFG~a~~ 166 (190)
T cd05147 154 GKLYIIDVSQSVE 166 (190)
T ss_pred CcEEEEEcccccc
Confidence 5667778876543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.89 E-value=8.3e-10 Score=81.30 Aligned_cols=60 Identities=38% Similarity=0.514 Sum_probs=35.4
Q ss_pred CCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCC
Q 007935 90 SLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLL 149 (584)
Q Consensus 90 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l 149 (584)
+|++|+|++|+|+..-+..|..+++|++|+|++|+++...|..|.++++|++|+|++|+|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 456666666666643334555566666666666666655555566666666666666653
|
... |
| >PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape [] | Back alignment and domain information |
|---|
Probab=98.86 E-value=2.3e-09 Score=72.21 Aligned_cols=41 Identities=51% Similarity=0.991 Sum_probs=31.2
Q ss_pred hHHHHHHHHHHHhcccCCCCCCCCCCCCC-CCCCcceeeEec
Q 007935 23 NQDGLALLALKAAIAQDPTRALDSWSESD-STPCHWSGIHCI 63 (584)
Q Consensus 23 ~~~~~~l~~~~~~~~~~~~~~l~~w~~~~-~~~c~w~gv~c~ 63 (584)
++|.+||++||+++..+|.+.+.+|+... .+||+|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcCCCCCeeeccEEeC
Confidence 67999999999999877778899998763 789999999995
|
LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A. |
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.86 E-value=4.4e-10 Score=108.84 Aligned_cols=163 Identities=22% Similarity=0.249 Sum_probs=127.1
Q ss_pred EecCCCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCC
Q 007935 61 HCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLT 140 (584)
Q Consensus 61 ~c~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~ 140 (584)
+|....-..++-++.+|+ .+|..+- ..-+.|+|..|.|+..-|..|..+++|+.||||+|+|+..-|+.|.+|.+|.
T Consensus 42 ~Cs~~~g~~VdCr~~GL~-eVP~~LP--~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~ 118 (498)
T KOG4237|consen 42 TCSDVEGGIVDCRGKGLT-EVPANLP--PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLL 118 (498)
T ss_pred ccCCCCCceEEccCCCcc-cCcccCC--CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhh
Confidence 455433356677888887 4554432 2567899999999976677899999999999999999999999999999988
Q ss_pred eeecc-cCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCC-CCCCccccCCcccCC
Q 007935 141 HLDLS-SNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIP-QVGSLLNQGPTAFSG 218 (584)
Q Consensus 141 ~L~ls-~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~~~~~~~~~~~ 218 (584)
.|-+- +|+|+..--..|.+|.+|+ .|.+.-|++.-...+.|..+++|..|.|-+|.+....- .+..+.....+.+.-
T Consensus 119 ~Lvlyg~NkI~~l~k~~F~gL~slq-rLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~ 197 (498)
T KOG4237|consen 119 SLVLYGNNKITDLPKGAFGGLSSLQ-RLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQ 197 (498)
T ss_pred HHHhhcCCchhhhhhhHhhhHHHHH-HHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhc
Confidence 77554 5999944446889999999 89999999998888999999999999999999875433 233444455566677
Q ss_pred CCCCCCCCC
Q 007935 219 NPGLCGFPL 227 (584)
Q Consensus 219 n~~l~~~~~ 227 (584)
|+..|.+.+
T Consensus 198 np~icdCnL 206 (498)
T KOG4237|consen 198 NPFICDCNL 206 (498)
T ss_pred Ccccccccc
Confidence 887776544
|
|
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.81 E-value=2.3e-09 Score=78.88 Aligned_cols=60 Identities=42% Similarity=0.595 Sum_probs=31.9
Q ss_pred CCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCC
Q 007935 138 NLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNL 198 (584)
Q Consensus 138 ~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l 198 (584)
+|+.|+|++|+|+...+..|.++++|+ .|++++|+++...|+.|.++++|++|++++|+|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~-~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLE-TLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTES-EEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCC-EeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 445555555555533334455555555 555555555545555555666666666666543
|
... |
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.81 E-value=7.8e-10 Score=119.07 Aligned_cols=210 Identities=19% Similarity=0.195 Sum_probs=140.0
Q ss_pred eceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcC-CCceeeeeEEEEeCCceeEeeec
Q 007935 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQ-HPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 349 ~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~-HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
-||+|+|+.|-.....+... ..+|+|.+.... .....+....|..+-..+. |+|++++++...+.+..+++.||
T Consensus 27 ~ig~gs~~~~~~~~~~~~~~----~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~~~ 102 (601)
T KOG0590|consen 27 SIGKGSFSSSALASNSRDPE----SSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSLSY 102 (601)
T ss_pred cccccccchhhhhhhcCCCc----ceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccccCc
Confidence 38999999998877644321 577888776542 2222344556888877776 99999999999999999999999
Q ss_pred ccCCcHHHHH---------------------------h-c--ccccccCCCCccccccC-eEEecCCCc-----------
Q 007935 427 IRNGSLYAAL---------------------------H-G--FGLNRLLPGTSKVTKNE-TIVTSGTGS----------- 464 (584)
Q Consensus 427 ~~~GsL~~~L---------------------------~-~--~g~~~~~~~~~~i~~~~-~~~~~~~~~----------- 464 (584)
.++|++++.+ | . ..|+++.+.+..+.... .....+++.
T Consensus 103 s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g~~ 182 (601)
T KOG0590|consen 103 SDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNKNGAE 182 (601)
T ss_pred ccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhccccccCCcc
Confidence 9999986555 2 1 13455555544433333 333333321
Q ss_pred ---ccccC-CCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhh
Q 007935 465 ---RISAI-SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPAL 540 (584)
Q Consensus 465 ---~~~~g-t~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~ 540 (584)
...+| ++.|+|||.........+..|+||.|+++.-+++|..|++...........|..............++...
T Consensus 183 ~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (601)
T KOG0590|consen 183 RSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPWNSISDQA 262 (601)
T ss_pred eeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccccccccCccccCChhh
Confidence 12367 99999999855434567889999999999999999999987655544444444332221122223333332
Q ss_pred hhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHH
Q 007935 541 VKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVS 575 (584)
Q Consensus 541 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~ 575 (584)
.++..+++..+|..|.+.+++.
T Consensus 263 -------------~~~l~k~l~~~~~~r~s~~~~~ 284 (601)
T KOG0590|consen 263 -------------HDLLHKILKENPSNRLSIEELK 284 (601)
T ss_pred -------------hhcccccccCCchhcccccccc
Confidence 3344558888999999887764
|
|
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.81 E-value=3e-09 Score=110.82 Aligned_cols=162 Identities=32% Similarity=0.339 Sum_probs=127.9
Q ss_pred CcceeeEecCCCEE---EEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCC-CCCEEecCCCcccCCCC
Q 007935 55 CHWSGIHCIRNRVT---SLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNAT-NLVYLDLAHNSFCGPIP 130 (584)
Q Consensus 55 c~w~gv~c~~~~v~---~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~-~L~~L~l~~N~l~~~~p 130 (584)
+.+.+..+....+. .+++..|.+... ...+..++.++.|++.+|+++. +|.....++ +|+.|++++|++. .+|
T Consensus 80 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~l~~L~l~~n~i~~-i~~~~~~~~~nL~~L~l~~N~i~-~l~ 156 (394)
T COG4886 80 ISSLDGSENLLNLLPLPSLDLNLNRLRSN-ISELLELTNLTSLDLDNNNITD-IPPLIGLLKSNLKELDLSDNKIE-SLP 156 (394)
T ss_pred cccccccccccCCCCCceeeccccccccC-chhhhcccceeEEecCCccccc-Cccccccchhhcccccccccchh-hhh
Confidence 45555555554445 588888887533 3455666899999999999994 777778885 9999999999998 777
Q ss_pred cccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccc
Q 007935 131 DRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLN 210 (584)
Q Consensus 131 ~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~ 210 (584)
..++.+++|+.|++++|+++ .+|...+.++.|. .|++++|+++ .+|...+.+..|++|.+++|.+.-.+.....+.+
T Consensus 157 ~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~-~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~~~~~~~~~~~~ 233 (394)
T COG4886 157 SPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLN-NLDLSGNKIS-DLPPEIELLSALEELDLSNNSIIELLSSLSNLKN 233 (394)
T ss_pred hhhhccccccccccCCchhh-hhhhhhhhhhhhh-heeccCCccc-cCchhhhhhhhhhhhhhcCCcceecchhhhhccc
Confidence 78999999999999999999 8888887899999 9999999999 7787776777899999999975555555555555
Q ss_pred cCCcccCCCCCC
Q 007935 211 QGPTAFSGNPGL 222 (584)
Q Consensus 211 ~~~~~~~~n~~l 222 (584)
+..+...+|...
T Consensus 234 l~~l~l~~n~~~ 245 (394)
T COG4886 234 LSGLELSNNKLE 245 (394)
T ss_pred ccccccCCceee
Confidence 555555566533
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.80 E-value=8.5e-09 Score=93.68 Aligned_cols=156 Identities=18% Similarity=0.185 Sum_probs=116.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCC-CceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQH-PNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~H-pnIV~l~g~~~~~~~~~lV~E 425 (584)
-+.||.|+||.+|.|.....+ ..||||.-+..... -....|..+...++| ..|..+..|..+...-.+|||
T Consensus 20 vrkiGsGSFGdIy~~~~i~~g-----e~VAiK~Es~~a~h---pqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMd 91 (341)
T KOG1163|consen 20 VRKIGSGSFGDIYLGISITSG-----EEVAIKLESSKAKH---PQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMD 91 (341)
T ss_pred EEeecCCchhheeeeeeccCC-----ceEEEEeecccCCC---cchhHHHHHHHHhccCCCCchhhhhccccccceeeee
Confidence 367999999999999887765 89999987764322 457889999999976 677788888888899999999
Q ss_pred cccCCcHHH--------------------------HH--hcccccccCCCCcccccc---CeEEecCCCcc---------
Q 007935 426 FIRNGSLYA--------------------------AL--HGFGLNRLLPGTSKVTKN---ETIVTSGTGSR--------- 465 (584)
Q Consensus 426 y~~~GsL~~--------------------------~L--~~~g~~~~~~~~~~i~~~---~~~~~~~~~~~--------- 465 (584)
.. |-||.+ |+ +.|.|+|++++|...-.+ ..+...|||.+
T Consensus 92 LL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~ 170 (341)
T KOG1163|consen 92 LL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTR 170 (341)
T ss_pred cc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhcccccc
Confidence 87 557632 22 356799999988764443 23333444421
Q ss_pred ---------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCC
Q 007935 466 ---------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPE 512 (584)
Q Consensus 466 ---------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~ 512 (584)
.-.||..|.+--. .-|...+.+-|+=|.|-+|...-.|..||.+..
T Consensus 171 ~HIpyre~r~ltGTaRYASinA-h~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglk 225 (341)
T KOG1163|consen 171 QHIPYREDRNLTGTARYASINA-HLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLK 225 (341)
T ss_pred ccCccccCCccceeeeehhhhh-hhhhhhhhhhhhhhhcceeeeeecCCCcccccc
Confidence 1368888887654 233455778899999999999999999998754
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=98.76 E-value=3.2e-08 Score=91.63 Aligned_cols=109 Identities=14% Similarity=0.145 Sum_probs=77.5
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcch-h------------------------hHhHHHHHHHHHhc
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATW-R------------------------FKDFESEVEAIARV 402 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~-~------------------------~~~f~~Ei~~l~~l 402 (584)
..||+|++|.||+|...++ +.||||+++...... . ...+.+|.+.+.++
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g------~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 76 (190)
T cd05145 3 GCISTGKEANVYHARTGDG------EELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRL 76 (190)
T ss_pred ceeecCCCcEEEEEEcCCC------CEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 4699999999999998744 899999998652110 0 12246799999999
Q ss_pred CCCceeeeeEEEEeCCceeEeeecccCCcHH-------------------------HHHhc-c--cccccCCCCcccccc
Q 007935 403 QHPNIVRLKAFYYANDEKLLISDFIRNGSLY-------------------------AALHG-F--GLNRLLPGTSKVTKN 454 (584)
Q Consensus 403 ~HpnIV~l~g~~~~~~~~~lV~Ey~~~GsL~-------------------------~~L~~-~--g~~~~~~~~~~i~~~ 454 (584)
+|++|.....+... ..+|||||++++++. .++|. . -|+|++++|..+. +
T Consensus 77 ~~~~i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~ 153 (190)
T cd05145 77 YEAGVPVPEPILLK--KNVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-D 153 (190)
T ss_pred HhCCCCCceEEEec--CCEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-C
Confidence 99988655544333 358999999987531 23444 3 4788889998887 6
Q ss_pred CeEEecCCCcc
Q 007935 455 ETIVTSGTGSR 465 (584)
Q Consensus 455 ~~~~~~~~~~~ 465 (584)
+.++..|+|..
T Consensus 154 ~~~~liDFG~a 164 (190)
T cd05145 154 GKPYIIDVSQA 164 (190)
T ss_pred CCEEEEEcccc
Confidence 66667777754
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=98.74 E-value=4.6e-09 Score=106.15 Aligned_cols=135 Identities=18% Similarity=0.279 Sum_probs=86.3
Q ss_pred ceeEeeecccCCcHHHHHhcc---------------------------cccccCCCCccccccCeEEecCCCc-------
Q 007935 419 EKLLISDFIRNGSLYAALHGF---------------------------GLNRLLPGTSKVTKNETIVTSGTGS------- 464 (584)
Q Consensus 419 ~~~lV~Ey~~~GsL~~~L~~~---------------------------g~~~~~~~~~~i~~~~~~~~~~~~~------- 464 (584)
..|+.|++|..++|.+||.+. -|+++.+.++....+...++.+|+.
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~yk~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~ 409 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEYKGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKD 409 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhhccchhhhccccccccccchhhhhhhhhheeecccC
Confidence 578999999999999999531 1566666666555444444433321
Q ss_pred ----------ccccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCCCc
Q 007935 465 ----------RISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLS 533 (584)
Q Consensus 465 ----------~~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 533 (584)
+...||..||+||. +.|+.|+.|+||||+|++|+|+++ =..+++. ........ .
T Consensus 410 ~~~~~~~a~~t~~~gt~~YmsPEQ-i~g~~y~~kvdIyaLGlil~EL~~~f~T~~er--------~~t~~d~r------~ 474 (516)
T KOG1033|consen 410 ETVAPAAASHTQQVGTLLYMSPEQ-IRGQQYSEKVDIYALGLILAELLIQFSTQFER--------IATLTDIR------D 474 (516)
T ss_pred CcccchhhhhhhcccccccCCHHH-HhhhhhhhhcchhhHHHHHHHHHHHhccHHHH--------HHhhhhhh------c
Confidence 23479999999999 455899999999999999999998 3333321 11111111 1
Q ss_pred cccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHH
Q 007935 534 EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 574 (584)
Q Consensus 534 ~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev 574 (584)
..++|....... .-+.+..+.+.+.|.+||++.++
T Consensus 475 g~ip~~~~~d~p------~e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 475 GIIPPEFLQDYP------EEYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred CCCChHHhhcCc------HHHHHHHHhcCCCcccCchHHHH
Confidence 223333222111 12346777999999999955544
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.73 E-value=3.1e-08 Score=92.45 Aligned_cols=83 Identities=13% Similarity=0.105 Sum_probs=62.9
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-----CCCceeeeeEEEEeCC--
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-----QHPNIVRLKAFYYAND-- 418 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-----~HpnIV~l~g~~~~~~-- 418 (584)
....||+|+||.||. +.... . .+||++..... ...+.+.+|+++++++ +||||++++|++.++.
T Consensus 6 ~~~~LG~G~~~~Vy~--hp~~~-----~-k~IKv~~~~~~-~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~ 76 (210)
T PRK10345 6 EQSPLGTGRHRKCYA--HPEDA-----Q-RCIKIVYHRGD-GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGT 76 (210)
T ss_pred CcceecCCCceEEEE--CCCCc-----C-eEEEEEecccc-chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCC
Confidence 346899999999996 44432 2 36888876422 2347899999999999 5799999999998864
Q ss_pred -cee-Eeeec--ccCCcHHHHHh
Q 007935 419 -EKL-LISDF--IRNGSLYAALH 437 (584)
Q Consensus 419 -~~~-lV~Ey--~~~GsL~~~L~ 437 (584)
..+ +|+|| +++|+|.+++.
T Consensus 77 g~v~~~I~e~~G~~~~tL~~~l~ 99 (210)
T PRK10345 77 GYVYDVIADFDGKPSITLTEFAE 99 (210)
T ss_pred eEEEEEEecCCCCcchhHHHHHH
Confidence 334 78999 66889976664
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.63 E-value=5.7e-08 Score=107.31 Aligned_cols=149 Identities=15% Similarity=0.274 Sum_probs=108.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcC---CCceeeeeEEEEeCCceeEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ---HPNIVRLKAFYYANDEKLLI 423 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~---HpnIV~l~g~~~~~~~~~lV 423 (584)
.+.||+|+||.||+|...++ +.||+|.-+....++ |.-=.+++.||+ -+-|..+..++.-.+.-+||
T Consensus 703 ~~e~G~g~y~~vy~a~~~~~------~~~alK~e~P~~~WE----fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv 772 (974)
T KOG1166|consen 703 SKEIGEGSYGSVYVATHSNG------KLVALKVEKPPNPWE----FYICLQVMERLKPQMLPSIMHISSAHVFQNASVLV 772 (974)
T ss_pred EeeeccccceEEEEeecCCC------cEEEEEeecCCCcee----eeehHHHHHhhchhhhcchHHHHHHHccCCcceee
Confidence 57899999999999999885 899999988765542 222234556665 23455555556667888999
Q ss_pred eecccCCcHHHHH-------------------------hcc--cccccCCCCccccc----c---CeEEecCCCcc----
Q 007935 424 SDFIRNGSLYAAL-------------------------HGF--GLNRLLPGTSKVTK----N---ETIVTSGTGSR---- 465 (584)
Q Consensus 424 ~Ey~~~GsL~~~L-------------------------~~~--g~~~~~~~~~~i~~----~---~~~~~~~~~~~---- 465 (584)
+||.+.|+|.+++ |+. .|.|++++|..+.. + ..+...|||.+
T Consensus 773 ~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~ 852 (974)
T KOG1166|consen 773 SEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMK 852 (974)
T ss_pred eeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccceeee
Confidence 9999999997665 333 46888888764322 1 23334455432
Q ss_pred ---------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCC
Q 007935 466 ---------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRL 506 (584)
Q Consensus 466 ---------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~ 506 (584)
...+|..+-.+|+ ..|+..+..+|-|.+..+++-|+.|+.
T Consensus 853 lfp~~~~F~~~~~td~f~C~EM-~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 853 LFPDGTKFKAVWHTDLFDCIEM-REGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred EcCCCcEEeeeeccccchhHHH-hcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 2356778999998 666899999999999999999999973
|
|
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.2e-07 Score=102.57 Aligned_cols=111 Identities=14% Similarity=0.180 Sum_probs=81.9
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEE-ecCC-C-----cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCC
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRR-LTEG-D-----ATWRFKDFESEVEAIARVQHPNIVRLKAFYYAND 418 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~-l~~~-~-----~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~ 418 (584)
..+.||+|+||+||+|.+... .+++|+ ..+. . .....+++.+|++++.+++|++++....++.+.+
T Consensus 337 ~~~~iG~G~~g~Vy~~~~~~~-------~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~ 409 (535)
T PRK09605 337 PDHLIGKGAEADIKKGEYLGR-------DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPE 409 (535)
T ss_pred ccceeccCCcEEEEEEeecCc-------cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCC
Confidence 357899999999999987654 233332 2111 1 1112356899999999999999999888888888
Q ss_pred ceeEeeecccCCcHHHHH-----------------hcc--cccccCCCCccccccCeEEecCCCc
Q 007935 419 EKLLISDFIRNGSLYAAL-----------------HGF--GLNRLLPGTSKVTKNETIVTSGTGS 464 (584)
Q Consensus 419 ~~~lV~Ey~~~GsL~~~L-----------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~ 464 (584)
..++||||+++++|.+++ |+. -|+|+++.|+.+ .+..+...|++.
T Consensus 410 ~~~lv~E~~~g~~L~~~l~~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGl 473 (535)
T PRK09605 410 EKTIVMEYIGGKDLKDVLEGNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGL 473 (535)
T ss_pred CCEEEEEecCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCcc
Confidence 899999999999997665 433 378888888877 455566677654
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.6e-07 Score=87.76 Aligned_cols=108 Identities=13% Similarity=0.182 Sum_probs=77.5
Q ss_pred eceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc-------chhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCcee
Q 007935 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-------TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKL 421 (584)
Q Consensus 349 ~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~-------~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~ 421 (584)
+||+|++|.||+|.+.+ ..|++|....... ....+++.+|++++.+++|+++.....++...+..+
T Consensus 1 ~ig~G~~~~vy~~~~~~-------~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~ 73 (199)
T TIGR03724 1 LIAKGAEAIIYLGDFLG-------LKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKT 73 (199)
T ss_pred CCCCCceEEEEEeecCC-------ccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCE
Confidence 48999999999998533 5788888654211 111356789999999999988776666677777889
Q ss_pred EeeecccCCcHHHHHh------------------ccc--ccccCCCCccccccCeEEecCCCc
Q 007935 422 LISDFIRNGSLYAALH------------------GFG--LNRLLPGTSKVTKNETIVTSGTGS 464 (584)
Q Consensus 422 lV~Ey~~~GsL~~~L~------------------~~g--~~~~~~~~~~i~~~~~~~~~~~~~ 464 (584)
+||||+++++|.+++. ..| |+++.+.|..+. ++.+...|++.
T Consensus 74 lv~e~~~g~~l~~~~~~~~~~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~ 135 (199)
T TIGR03724 74 IVMEYIEGKPLKDVIEEGNDELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGL 135 (199)
T ss_pred EEEEEECCccHHHHHhhcHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCC
Confidence 9999999999876543 333 566677776665 55555566543
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=98.57 E-value=2.7e-07 Score=87.12 Aligned_cols=82 Identities=7% Similarity=0.145 Sum_probs=65.4
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcc-------hhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCce
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-------WRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK 420 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~-------~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~ 420 (584)
+.||+|++|.||+|...+ ..|+||+....... .....+.+|++++..++|++|+....++...+..
T Consensus 2 ~~l~~G~~~~vy~~~~~~-------~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~ 74 (211)
T PRK14879 2 KLIKRGAEAEIYLGDFLG-------IKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENF 74 (211)
T ss_pred cccccCceEEEEEEeeCC-------CceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCC
Confidence 368999999999998733 57888876543211 1124688999999999999998888888888889
Q ss_pred eEeeecccCCcHHHHH
Q 007935 421 LLISDFIRNGSLYAAL 436 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~~L 436 (584)
++||||+++++|.+++
T Consensus 75 ~lv~e~~~G~~L~~~~ 90 (211)
T PRK14879 75 IIVMEYIEGEPLKDLI 90 (211)
T ss_pred EEEEEEeCCcCHHHHH
Confidence 9999999999997665
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.57 E-value=2.1e-07 Score=88.75 Aligned_cols=157 Identities=16% Similarity=0.198 Sum_probs=115.1
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
-++.||+|.||+.+.|+.--.+ ..||||.-...... -++..|....+.| ..++|...+-|-.++-+-.||+
T Consensus 32 VGkKIGeGsFG~lf~G~Nl~nn-----e~VAIKfEPrkS~A---PQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVi 103 (449)
T KOG1165|consen 32 VGKKIGEGSFGVLFLGKNLYNN-----EPVAIKFEPRKSEA---PQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVI 103 (449)
T ss_pred eccccccCcceeeecccccccC-----ceEEEEeccccCCc---chHHHHHHHHHHHcCCCCCCceeeeccccchhhhhh
Confidence 3567999999999999865444 89999987553222 4566788777777 5689999988888888889999
Q ss_pred ecccCCcHHHH---H-----------------------hcc--cccccCCCCcccccc-----CeEEecCCCcc------
Q 007935 425 DFIRNGSLYAA---L-----------------------HGF--GLNRLLPGTSKVTKN-----ETIVTSGTGSR------ 465 (584)
Q Consensus 425 Ey~~~GsL~~~---L-----------------------~~~--g~~~~~~~~~~i~~~-----~~~~~~~~~~~------ 465 (584)
|+. |-||.|. . |+. ..+|++++|..|-.. ..+...|||..
T Consensus 104 dLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp 182 (449)
T KOG1165|consen 104 DLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDP 182 (449)
T ss_pred hhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCc
Confidence 987 4566433 2 222 347888888766432 33344555522
Q ss_pred ------------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCC
Q 007935 466 ------------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPE 512 (584)
Q Consensus 466 ------------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~ 512 (584)
...||..||+--.. -|..-+.+-|.=|+|-|++..+.|..||.+..
T Consensus 183 ~TkqHIPYrE~KSLsGTARYMSINTH-lGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLK 240 (449)
T KOG1165|consen 183 KTKQHIPYREHKSLSGTARYMSINTH-LGREQSRRDDLEALGHVFMYFLRGSLPWQGLK 240 (449)
T ss_pred cccccCccccccccccceeeeEeecc-ccchhhhhhhHHHhhhhhhhhccCCCcccccc
Confidence 13689999998763 34677889999999999999999999998743
|
|
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.54 E-value=1.2e-09 Score=113.36 Aligned_cols=126 Identities=30% Similarity=0.393 Sum_probs=92.2
Q ss_pred CEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCc-ccCCCCCCCeeec
Q 007935 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPD-RIKTLKNLTHLDL 144 (584)
Q Consensus 66 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~l~~L~~L~l 144 (584)
.+...+++.|.|. .+..++.-++.|++|+|++|+++.. ..+..|+.|++|||++|++. .+|. ...++. |+.|+|
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~l 239 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLNL 239 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhc-cccccchhhhh-heeeee
Confidence 4566677778777 5677788888888999999988853 27788888999999999887 4553 233444 888888
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCcccc-CccccCCCCCcEEEeecCCCc
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQI-PEMYGHFPVMVSLDLRNNNLS 199 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~ 199 (584)
++|.++ .+- .+.+|.+|. .||+++|-|++.- -..+..|..|+.|+|.+|.+.
T Consensus 240 rnN~l~-tL~-gie~LksL~-~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 240 RNNALT-TLR-GIENLKSLY-GLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred cccHHH-hhh-hHHhhhhhh-ccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 888886 332 467788888 8888888876432 223455677888888888774
|
|
| >KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.45 E-value=1.1e-08 Score=84.78 Aligned_cols=104 Identities=27% Similarity=0.370 Sum_probs=60.6
Q ss_pred EEEEEcCCCCCcccCC---ccccCCCCCCEEEccCCCCCCCCcccccCC-CCCCEEecCCCcccCCCCcccCCCCCCCee
Q 007935 67 VTSLYLPNRNLTGYMP---SELGLLNSLTRLSLASNNFSKPIPANLFNA-TNLVYLDLAHNSFCGPIPDRIKTLKNLTHL 142 (584)
Q Consensus 67 v~~l~l~~~~l~~~~~---~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l-~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L 142 (584)
.-.++|++++|- .++ ..+.....|+..+|++|.|. .+|..|... +.++.|+|++|+|+ .+|..+..++.|+.|
T Consensus 29 ~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~l 105 (177)
T KOG4579|consen 29 LHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSL 105 (177)
T ss_pred hhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhc
Confidence 344556666554 222 23444455566667776665 355555433 35666666666666 566666666666666
Q ss_pred ecccCCCCCCchHHhhccccCccEEEeccccCc
Q 007935 143 DLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFS 175 (584)
Q Consensus 143 ~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~ 175 (584)
++++|.|. ..|..+..|.++. .|+..+|.+.
T Consensus 106 Nl~~N~l~-~~p~vi~~L~~l~-~Lds~~na~~ 136 (177)
T KOG4579|consen 106 NLRFNPLN-AEPRVIAPLIKLD-MLDSPENARA 136 (177)
T ss_pred ccccCccc-cchHHHHHHHhHH-HhcCCCCccc
Confidence 66666665 5666666666666 6666666554
|
|
| >KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.45 E-value=4.2e-08 Score=96.68 Aligned_cols=134 Identities=23% Similarity=0.211 Sum_probs=75.0
Q ss_pred CCEEEEEcCCCCCcccC--CccccCCCCCCEEEccCCCCCCCCcccc-cCCCCCCEEecCCCcccC-CCCcccCCCCCCC
Q 007935 65 NRVTSLYLPNRNLTGYM--PSELGLLNSLTRLSLASNNFSKPIPANL-FNATNLVYLDLAHNSFCG-PIPDRIKTLKNLT 140 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~--~~~~~~l~~L~~L~l~~n~l~~~~p~~~-~~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~ 140 (584)
..|+.|||++|-+...- -.-...|++|+.|+|+.|.+.-...+.. ..+++|+.|.|+.+.|+- .+-.....+++|+
T Consensus 146 ~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~ 225 (505)
T KOG3207|consen 146 PNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLE 225 (505)
T ss_pred CcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhCCcHH
Confidence 46888888888777553 3455678888888888888763222221 245666777777766651 1111233455666
Q ss_pred eeecccCCCCCCchHHhhccccCccEEEeccccCccccC--ccccCCCCCcEEEeecCCCcc
Q 007935 141 HLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIP--EMYGHFPVMVSLDLRNNNLSG 200 (584)
Q Consensus 141 ~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p--~~~~~l~~L~~L~l~~N~l~~ 200 (584)
.|+|..|..-+.--.....+..|+ .|||++|++- ..+ ...+.++.|..|+++.+.++.
T Consensus 226 ~L~L~~N~~~~~~~~~~~i~~~L~-~LdLs~N~li-~~~~~~~~~~l~~L~~Lnls~tgi~s 285 (505)
T KOG3207|consen 226 VLYLEANEIILIKATSTKILQTLQ-ELDLSNNNLI-DFDQGYKVGTLPGLNQLNLSSTGIAS 285 (505)
T ss_pred HhhhhcccccceecchhhhhhHHh-hccccCCccc-ccccccccccccchhhhhccccCcch
Confidence 666666632222233334445555 6666666554 222 234455555666666555543
|
|
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.43 E-value=3.1e-09 Score=110.38 Aligned_cols=128 Identities=30% Similarity=0.347 Sum_probs=99.7
Q ss_pred CCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEe
Q 007935 90 SLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNL 169 (584)
Q Consensus 90 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l 169 (584)
.|...+++.|.+. .+..++.-++.|+.|||++|+++.. +.+..|..|++|||++|.|+ .+|.--..--.|. .|+|
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~L~-~L~l 239 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGCKLQ-LLNL 239 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhc-cccccchhhhhhe-eeee
Confidence 4777888899887 5677888889999999999999843 37889999999999999998 6665322222377 9999
Q ss_pred ccccCccccCccccCCCCCcEEEeecCCCccC--CCCCCCccccCCcccCCCCCCCC
Q 007935 170 SFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGE--IPQVGSLLNQGPTAFSGNPGLCG 224 (584)
Q Consensus 170 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~--~p~~~~~~~~~~~~~~~n~~l~~ 224 (584)
++|.++.. -.+.+|.+|+.|||++|-|.+- +-.++.+..+..+.+.|||.-|.
T Consensus 240 rnN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~ 294 (1096)
T KOG1859|consen 240 RNNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCA 294 (1096)
T ss_pred cccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccC
Confidence 99999833 2467899999999999998762 22245566677788999996664
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=98.38 E-value=1.1e-06 Score=84.14 Aligned_cols=108 Identities=17% Similarity=0.183 Sum_probs=72.3
Q ss_pred ceeceeecCceEEEEE-ecCCCCCCCceEEEEEEecCCCcch-----------------------hhHhHHHHHHHHHhc
Q 007935 347 AYVVGKSKNGIMYKVV-VGRGSGMGAPTVVAVRRLTEGDATW-----------------------RFKDFESEVEAIARV 402 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~-~~~~~~~~~~~~vAvK~l~~~~~~~-----------------------~~~~f~~Ei~~l~~l 402 (584)
.+.||+|++|.||+|. ....+ +.||||.++...... ....+.+|++++.++
T Consensus 33 ~~~Lg~G~~g~Vy~a~~~~~~g-----~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L 107 (237)
T smart00090 33 GGCISTGKEANVYHALDFDGSG-----KERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL 107 (237)
T ss_pred CCeeccCcceeEEEEEecCCCC-----cEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4579999999999998 33333 899999987542100 012356899999999
Q ss_pred CCCc--eeeeeEEEEeCCceeEeeecccCCcHH-------------------------HHHhccc---ccccCCCCcccc
Q 007935 403 QHPN--IVRLKAFYYANDEKLLISDFIRNGSLY-------------------------AALHGFG---LNRLLPGTSKVT 452 (584)
Q Consensus 403 ~Hpn--IV~l~g~~~~~~~~~lV~Ey~~~GsL~-------------------------~~L~~~g---~~~~~~~~~~i~ 452 (584)
.|.. +.+++++ ...++||||+++++|. .+||..| |++++++|+.+.
T Consensus 108 ~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~ 183 (237)
T smart00090 108 YEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH 183 (237)
T ss_pred HhcCCCCCeeeEe----cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE
Confidence 7633 3444442 3458999999998762 2345444 677788887766
Q ss_pred ccCeEEecCCCc
Q 007935 453 KNETIVTSGTGS 464 (584)
Q Consensus 453 ~~~~~~~~~~~~ 464 (584)
+..+...|++.
T Consensus 184 -~~~i~LiDFg~ 194 (237)
T smart00090 184 -DGKVVIIDVSQ 194 (237)
T ss_pred -CCCEEEEEChh
Confidence 55555566654
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=98.38 E-value=1.1e-06 Score=82.10 Aligned_cols=109 Identities=15% Similarity=0.110 Sum_probs=77.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcc---------------------hhhHhHHHHHHHHHhcCCC
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT---------------------WRFKDFESEVEAIARVQHP 405 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~---------------------~~~~~f~~Ei~~l~~l~Hp 405 (584)
.+.||+|+||.||++...++ +.||||+++..... .....+.+|+.++.++.|+
T Consensus 20 ~~~i~~G~~g~Vy~~~~~~g------~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 93 (198)
T cd05144 20 GNQIGVGKESDVYLALDPDG------NPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEE 93 (198)
T ss_pred CCccccCcceEEEEEEcCCC------CEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHc
Confidence 46799999999999988654 79999987653210 0112367899999999887
Q ss_pred c--eeeeeEEEEeCCceeEeeecccCCcHHHHH-------------------hc--ccccccCCCCccccccCeEEecCC
Q 007935 406 N--IVRLKAFYYANDEKLLISDFIRNGSLYAAL-------------------HG--FGLNRLLPGTSKVTKNETIVTSGT 462 (584)
Q Consensus 406 n--IV~l~g~~~~~~~~~lV~Ey~~~GsL~~~L-------------------~~--~g~~~~~~~~~~i~~~~~~~~~~~ 462 (584)
+ +++.++ ....++||||+++++|.... |. .-|+++.+.|..+..+......|+
T Consensus 94 ~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~~~liDf 169 (198)
T cd05144 94 GFPVPKPID----WNRHAVVMEYIDGVELYRVRVLEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEKIYIIDW 169 (198)
T ss_pred CCCCCceee----cCCceEEEEEeCCcchhhccccccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCcEEEEEC
Confidence 4 444444 24569999999999874332 22 346788888888877777777777
Q ss_pred Ccc
Q 007935 463 GSR 465 (584)
Q Consensus 463 ~~~ 465 (584)
|..
T Consensus 170 g~~ 172 (198)
T cd05144 170 PQM 172 (198)
T ss_pred Ccc
Confidence 644
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.35 E-value=6.6e-08 Score=95.32 Aligned_cols=133 Identities=24% Similarity=0.224 Sum_probs=82.9
Q ss_pred CEEEEEcCCCCCcccCC--ccccCCCCCCEEEccCCCCCCCCc--ccccCCCCCCEEecCCCcccCCCCccc-CCCCCCC
Q 007935 66 RVTSLYLPNRNLTGYMP--SELGLLNSLTRLSLASNNFSKPIP--ANLFNATNLVYLDLAHNSFCGPIPDRI-KTLKNLT 140 (584)
Q Consensus 66 ~v~~l~l~~~~l~~~~~--~~~~~l~~L~~L~l~~n~l~~~~p--~~~~~l~~L~~L~l~~N~l~~~~p~~~-~~l~~L~ 140 (584)
.++.+.|.+.... ..+ .....+++++.||||.|-|+...| .-...|++|+.|+|+.|++.-...... ..++.|+
T Consensus 122 kL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK 200 (505)
T KOG3207|consen 122 KLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLK 200 (505)
T ss_pred hhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhh
Confidence 4666666666554 222 356677888888888887765322 223567888888888888753222211 2466788
Q ss_pred eeecccCCCCCC-chHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCcc
Q 007935 141 HLDLSSNLLNGS-LPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSG 200 (584)
Q Consensus 141 ~L~ls~N~l~~~-~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 200 (584)
.|.|+.+.|+.. +-.-+..+++|+ .|+|+.|..-+.-.....-+..|++|||++|++-.
T Consensus 201 ~L~l~~CGls~k~V~~~~~~fPsl~-~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~ 260 (505)
T KOG3207|consen 201 QLVLNSCGLSWKDVQWILLTFPSLE-VLYLEANEIILIKATSTKILQTLQELDLSNNNLID 260 (505)
T ss_pred eEEeccCCCCHHHHHHHHHhCCcHH-HhhhhcccccceecchhhhhhHHhhccccCCcccc
Confidence 888888887732 222344567777 78888775332333344456678888888887754
|
|
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.1e-06 Score=83.80 Aligned_cols=108 Identities=21% Similarity=0.392 Sum_probs=70.4
Q ss_pred HHHHhcCCCceeeeeEEEEeC-----CceeEeeecccCCcHHHHHhcc---------------------cccccCCCCc-
Q 007935 397 EAIARVQHPNIVRLKAFYYAN-----DEKLLISDFIRNGSLYAALHGF---------------------GLNRLLPGTS- 449 (584)
Q Consensus 397 ~~l~~l~HpnIV~l~g~~~~~-----~~~~lV~Ey~~~GsL~~~L~~~---------------------g~~~~~~~~~- 449 (584)
.-|-.+.|-|||+++.|+.+. .+..++.|||+.|++..+|++. ++..++.-.-
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Pp 198 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPP 198 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCc
Confidence 445667799999999998654 3578999999999999888742 2222222111
Q ss_pred -----------cccccCeEEecCCC----------------cccccCCCcccCccccccCCCCCCccchhhHHHHHHHHH
Q 007935 450 -----------KVTKNETIVTSGTG----------------SRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEIL 502 (584)
Q Consensus 450 -----------~i~~~~~~~~~~~~----------------~~~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ell 502 (584)
.+..++-+++ +.+ .....+-++|.|||+-.. ...+.++|||+||+..+||.
T Consensus 199 iihgnlTc~tifiq~ngLIki-g~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~-tn~~~a~dIy~fgmcAlema 276 (458)
T KOG1266|consen 199 IIHGNLTCDTIFIQHNGLIKI-GSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTT-TNTTGASDIYKFGMCALEMA 276 (458)
T ss_pred cccCCcchhheeecCCceEEe-cccCccccchhhhhhhHhhhhccccCCccccCCcCcc-cccccchhhhhhhHHHHHHH
Confidence 1111111111 111 112346678999998333 46678999999999999998
Q ss_pred hCCC
Q 007935 503 TGRL 506 (584)
Q Consensus 503 tG~~ 506 (584)
.+..
T Consensus 277 ilEi 280 (458)
T KOG1266|consen 277 ILEI 280 (458)
T ss_pred Hhee
Confidence 8763
|
|
| >KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.26 E-value=7.4e-08 Score=80.05 Aligned_cols=111 Identities=22% Similarity=0.252 Sum_probs=85.5
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
..++.++|++|.+....+..-...+.++.|+|++|.|+ .+|.++..++.|+.|++++|.|. ..|..+..|.+|-.||.
T Consensus 53 ~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Lds 130 (177)
T KOG4579|consen 53 YELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLDS 130 (177)
T ss_pred ceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhcC
Confidence 46889999999999544443345568999999999999 58999999999999999999998 66777778999999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIP 179 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p 179 (584)
.+|.+. .+|-.+.- +.+....++.+|.+.+.-+
T Consensus 131 ~~na~~-eid~dl~~-s~~~al~~lgnepl~~~~~ 163 (177)
T KOG4579|consen 131 PENARA-EIDVDLFY-SSLPALIKLGNEPLGDETK 163 (177)
T ss_pred CCCccc-cCcHHHhc-cccHHHHHhcCCcccccCc
Confidence 999987 77765322 2222234556666655433
|
|
| >PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B | Back alignment and domain information |
|---|
Probab=98.25 E-value=8.8e-07 Score=59.71 Aligned_cols=36 Identities=39% Similarity=0.600 Sum_probs=14.8
Q ss_pred CCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCC
Q 007935 114 NLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLN 150 (584)
Q Consensus 114 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 150 (584)
+|++|+|++|+|+ .+|..+.+|++|+.|+|++|+|+
T Consensus 2 ~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 3444444444444 33333444444444444444443
|
... |
| >KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.20 E-value=2.1e-07 Score=97.18 Aligned_cols=125 Identities=30% Similarity=0.379 Sum_probs=67.9
Q ss_pred EEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeeccc
Q 007935 67 VTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSS 146 (584)
Q Consensus 67 v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~ 146 (584)
+..+++..|.+.. +-..+..+++|+.|++..|+|.+ +...+..+++|++|+|++|+|+...+ +..+..|+.|++++
T Consensus 74 l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~-i~~~l~~~~~L~~L~ls~N~I~~i~~--l~~l~~L~~L~l~~ 149 (414)
T KOG0531|consen 74 LKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEK-IENLLSSLVNLQVLDLSFNKITKLEG--LSTLTLLKELNLSG 149 (414)
T ss_pred HHhhccchhhhhh-hhcccccccceeeeeccccchhh-cccchhhhhcchheeccccccccccc--hhhccchhhheecc
Confidence 3344455555542 23345566666666666666664 22225556666666666666653322 44555566666666
Q ss_pred CCCCCCchHHhhccccCccEEEeccccCccccC-ccccCCCCCcEEEeecCCCc
Q 007935 147 NLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIP-EMYGHFPVMVSLDLRNNNLS 199 (584)
Q Consensus 147 N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~ 199 (584)
|.++ .+. .+..+..|+ .+++++|+++..-+ . ...+.+|+.+++.+|.+.
T Consensus 150 N~i~-~~~-~~~~l~~L~-~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~ 199 (414)
T KOG0531|consen 150 NLIS-DIS-GLESLKSLK-LLDLSYNRIVDIENDE-LSELISLEELDLGGNSIR 199 (414)
T ss_pred Ccch-hcc-CCccchhhh-cccCCcchhhhhhhhh-hhhccchHHHhccCCchh
Confidence 6665 222 233355565 66666666663322 1 345556666666666554
|
|
| >KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.18 E-value=1.6e-06 Score=97.35 Aligned_cols=128 Identities=26% Similarity=0.253 Sum_probs=92.7
Q ss_pred CEEEEEcCCCCCcccCCccccCCCCCCEEEccCCC--CCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeee
Q 007935 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNN--FSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLD 143 (584)
Q Consensus 66 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~--l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 143 (584)
.++.+.+-+|.+. .++....+ +.|++|-+..|. +....++.|..++.|++|||++|.=-+.+|..++.|-+|++|+
T Consensus 524 ~~rr~s~~~~~~~-~~~~~~~~-~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~ 601 (889)
T KOG4658|consen 524 SVRRMSLMNNKIE-HIAGSSEN-PKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLD 601 (889)
T ss_pred heeEEEEeccchh-hccCCCCC-CccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhccc
Confidence 4566666666665 22322222 268888888886 4332233366688888888888877778888888888888888
Q ss_pred cccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCC
Q 007935 144 LSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNN 197 (584)
Q Consensus 144 ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 197 (584)
|+...++ .+|..+.+|+.|. +||+.++.-...+|.....|++|++|.+-.-.
T Consensus 602 L~~t~I~-~LP~~l~~Lk~L~-~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 602 LSDTGIS-HLPSGLGNLKKLI-YLNLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred ccCCCcc-ccchHHHHHHhhh-eeccccccccccccchhhhcccccEEEeeccc
Confidence 8888888 8888888888888 88888886655667777778888888876554
|
|
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=98.14 E-value=9.4e-06 Score=71.57 Aligned_cols=76 Identities=12% Similarity=0.074 Sum_probs=63.9
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCC--CceeeeeEEEEeCCceeEeee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQH--PNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~H--pnIV~l~g~~~~~~~~~lV~E 425 (584)
+.||+|.++.||++...+ ..+++|....... ...+.+|+.++..++| .++++++++....+..+++||
T Consensus 4 ~~i~~g~~~~v~~~~~~~-------~~~~iK~~~~~~~---~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e 73 (155)
T cd05120 4 KLLKGGLTNRVYLLGTKD-------EDYVLKINPSREK---GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLME 73 (155)
T ss_pred eecccccccceEEEEecC-------CeEEEEecCCCCc---hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEE
Confidence 468999999999999755 4799998876433 3679999999999976 599999999888889999999
Q ss_pred cccCCcHH
Q 007935 426 FIRNGSLY 433 (584)
Q Consensus 426 y~~~GsL~ 433 (584)
|++++.+.
T Consensus 74 ~~~g~~~~ 81 (155)
T cd05120 74 WIEGETLD 81 (155)
T ss_pred ecCCeecc
Confidence 99988663
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.12 E-value=5e-06 Score=86.10 Aligned_cols=157 Identities=19% Similarity=0.190 Sum_probs=107.0
Q ss_pred hcceecee--ecCceEEEEEe--cCCCCCCCceEEEEEEecCC-CcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCC
Q 007935 345 ASAYVVGK--SKNGIMYKVVV--GRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARV-QHPNIVRLKAFYYAND 418 (584)
Q Consensus 345 ~~~~~iG~--G~~g~Vy~~~~--~~~~~~~~~~~vAvK~l~~~-~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~ 418 (584)
....-+|. |.+|.||++.. ...+ ..+|+|+-+.. ......+.=.+|+....++ .|+|.|+.+..+.+.+
T Consensus 117 ~~~~~~g~~~g~~~s~~~~~~~~~~s~-----~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~ 191 (524)
T KOG0601|consen 117 PISSRTGSLPGSKGSVFKSRCTNSESP-----HKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSG 191 (524)
T ss_pred ccccccccCCCCCceeecccCCcccCC-----cccccccccCCCCCccccccccchhhcccccCccccccccCcccccCC
Confidence 34566888 99999999988 4433 78999985543 2223334556888888888 5999999999999999
Q ss_pred ceeEeeecccCCcHHHHHhcc----------------------cccccCC----------CCcccccc-CeEEecCCC--
Q 007935 419 EKLLISDFIRNGSLYAALHGF----------------------GLNRLLP----------GTSKVTKN-ETIVTSGTG-- 463 (584)
Q Consensus 419 ~~~lV~Ey~~~GsL~~~L~~~----------------------g~~~~~~----------~~~~i~~~-~~~~~~~~~-- 463 (584)
..++-+|++. .+|.+|.|.. ++.+++. .++....+ ......+++
T Consensus 192 ~lfiqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v 270 (524)
T KOG0601|consen 192 ILFIQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLV 270 (524)
T ss_pred cceeeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCccee
Confidence 9999999986 6888887742 2222221 11111112 122222221
Q ss_pred ---------cc-----cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCC
Q 007935 464 ---------SR-----ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDA 509 (584)
Q Consensus 464 ---------~~-----~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~ 509 (584)
.. ...|...|++||. .. .-++.++||||+|.+..|..++.....
T Consensus 271 ~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~-~~-~l~~~~~di~sl~ev~l~~~l~~~~~~ 328 (524)
T KOG0601|consen 271 SKISDGNFSSVFKVSKRPEGDCIYAAKEL-LN-GLATFASDIFSLGEVILEAILGSHLPS 328 (524)
T ss_pred EEccCCccccceeeeecCCCCceEeChhh-hc-cccchHhhhcchhhhhHhhHhhccccc
Confidence 01 1145566999998 44 478999999999999999999876654
|
|
| >KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.08 E-value=1.6e-06 Score=97.35 Aligned_cols=128 Identities=23% Similarity=0.313 Sum_probs=102.8
Q ss_pred CCEEEEEcCCCC--CcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCee
Q 007935 65 NRVTSLYLPNRN--LTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHL 142 (584)
Q Consensus 65 ~~v~~l~l~~~~--l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L 142 (584)
..+++|-+..|. +.-.....|..++.|++|||++|.=-+.+|..+++|-+|++|+|++..++ .+|..+.+|.+|.+|
T Consensus 545 ~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~L 623 (889)
T KOG4658|consen 545 PKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYL 623 (889)
T ss_pred CccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhhee
Confidence 358888888886 44333455888999999999998777789999999999999999999998 899999999999999
Q ss_pred ecccCCCCCCchHHhhccccCccEEEecccc--CccccCccccCCCCCcEEEee
Q 007935 143 DLSSNLLNGSLPEFLLDLRALTGTLNLSFNQ--FSGQIPEMYGHFPVMVSLDLR 194 (584)
Q Consensus 143 ~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~--l~~~~p~~~~~l~~L~~L~l~ 194 (584)
|+..+.-...+|..+..+++|+ +|.+.... .+...-..+.++.+|+.|...
T Consensus 624 nl~~~~~l~~~~~i~~~L~~Lr-~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~ 676 (889)
T KOG4658|consen 624 NLEVTGRLESIPGILLELQSLR-VLRLPRSALSNDKLLLKELENLEHLENLSIT 676 (889)
T ss_pred ccccccccccccchhhhccccc-EEEeeccccccchhhHHhhhcccchhhheee
Confidence 9999987667788888899999 99885543 333344445556666655553
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=98.07 E-value=1e-05 Score=84.61 Aligned_cols=113 Identities=20% Similarity=0.211 Sum_probs=77.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchh--------------------------------------
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWR-------------------------------------- 388 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~-------------------------------------- 388 (584)
.+-||.|++|.||+|++.+| +.||||+.+.......
T Consensus 122 ~~plasaSigQVh~A~l~~G------~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~ 195 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDG------KEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLR 195 (437)
T ss_pred CcceeeeehhheEEEEecCC------CEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHH
Confidence 35799999999999999876 7999999876421100
Q ss_pred -hHhHHHHHHHHHhcC----CCceeeeeEEEEe-CCceeEeeecccCCcHHHHHh-------------------------
Q 007935 389 -FKDFESEVEAIARVQ----HPNIVRLKAFYYA-NDEKLLISDFIRNGSLYAALH------------------------- 437 (584)
Q Consensus 389 -~~~f~~Ei~~l~~l~----HpnIV~l~g~~~~-~~~~~lV~Ey~~~GsL~~~L~------------------------- 437 (584)
.-+|.+|+..+.+++ |.+-|.+-..+.+ ....+|||||++|++|.++..
T Consensus 196 ~Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~ia~~~~~~~l~ql~~ 275 (437)
T TIGR01982 196 RELDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLDRKALAENLARSFLNQVLR 275 (437)
T ss_pred HHHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCCHHHHHHHHHHHHHHHHHh
Confidence 013666777666662 3333333333332 456899999999998754431
Q ss_pred -cccccccCCCCccccccCeEEecCCCcc
Q 007935 438 -GFGLNRLLPGTSKVTKNETIVTSGTGSR 465 (584)
Q Consensus 438 -~~g~~~~~~~~~~i~~~~~~~~~~~~~~ 465 (584)
++-|+|.+++|..+..++.++..|+|..
T Consensus 276 ~g~~H~D~hPgNilv~~~g~i~liDfG~~ 304 (437)
T TIGR01982 276 DGFFHADLHPGNIFVLKDGKIIALDFGIV 304 (437)
T ss_pred CCceeCCCCcccEEECCCCcEEEEeCCCe
Confidence 1247889999998887877888887754
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=98.05 E-value=1.2e-05 Score=74.10 Aligned_cols=107 Identities=19% Similarity=0.260 Sum_probs=69.0
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcch-hhHhH----------------------HHHHHHHHhcCC
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATW-RFKDF----------------------ESEVEAIARVQH 404 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~-~~~~f----------------------~~Ei~~l~~l~H 404 (584)
+.||+|+||.||+|...++ +.||||+++...... ....+ ..|.+.+.++++
T Consensus 3 ~~lg~G~~g~Vy~a~~~~~------~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~ 76 (187)
T cd05119 3 GPIGTGKEADVYLALDGDG------EPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYE 76 (187)
T ss_pred cccccccceeEEEEECCCC------CEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHH
Confidence 5699999999999998744 789999987542111 11111 356666777654
Q ss_pred Cc--eeeeeEEEEeCCceeEeeecccCC-----cHH-------------------HHHhc-c--cccccCCCCccccccC
Q 007935 405 PN--IVRLKAFYYANDEKLLISDFIRNG-----SLY-------------------AALHG-F--GLNRLLPGTSKVTKNE 455 (584)
Q Consensus 405 pn--IV~l~g~~~~~~~~~lV~Ey~~~G-----sL~-------------------~~L~~-~--g~~~~~~~~~~i~~~~ 455 (584)
.. +.+.+++ ...++||||+++| .|. .++|. . -|++++++|..+. +.
T Consensus 77 ~~~~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~ 151 (187)
T cd05119 77 AGVPVPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVRLLEDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-DG 151 (187)
T ss_pred cCCCCCceEec----CCCEEEEEEeCCCCccChhhhhhhhcccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CC
Confidence 43 4444443 3469999999994 332 23344 3 4677888888777 66
Q ss_pred eEEecCCCcc
Q 007935 456 TIVTSGTGSR 465 (584)
Q Consensus 456 ~~~~~~~~~~ 465 (584)
.....|++..
T Consensus 152 ~~~liDfg~a 161 (187)
T cd05119 152 KVYIIDVPQA 161 (187)
T ss_pred cEEEEECccc
Confidence 6666776654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.03 E-value=1.2e-06 Score=91.43 Aligned_cols=126 Identities=29% Similarity=0.295 Sum_probs=93.6
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
..+..|+|.+|+|.+. ...+..+++|++|+|++|.|+... .+..++.|+.|++++|.|+. + ..+..+.+|+.+++
T Consensus 95 ~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L~l~~N~i~~-~-~~~~~l~~L~~l~l 169 (414)
T KOG0531|consen 95 KSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKELNLSGNLISD-I-SGLESLKSLKLLDL 169 (414)
T ss_pred cceeeeeccccchhhc-ccchhhhhcchheecccccccccc--chhhccchhhheeccCcchh-c-cCCccchhhhcccC
Confidence 5789999999999854 333788999999999999998643 56778889999999999973 3 34666999999999
Q ss_pred ccCCCCCCchHH-hhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCc
Q 007935 145 SSNLLNGSLPEF-LLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLS 199 (584)
Q Consensus 145 s~N~l~~~~p~~-~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 199 (584)
++|+++ .++.. ...+..++ .+++.+|.+.- .+.+..+..+..+++..|.++
T Consensus 170 ~~n~i~-~ie~~~~~~~~~l~-~l~l~~n~i~~--i~~~~~~~~l~~~~l~~n~i~ 221 (414)
T KOG0531|consen 170 SYNRIV-DIENDELSELISLE-ELDLGGNSIRE--IEGLDLLKKLVLLSLLDNKIS 221 (414)
T ss_pred Ccchhh-hhhhhhhhhccchH-HHhccCCchhc--ccchHHHHHHHHhhcccccce
Confidence 999998 44443 57777787 78888887762 122333334444455555554
|
|
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=98.01 E-value=2.9e-05 Score=74.50 Aligned_cols=114 Identities=17% Similarity=0.114 Sum_probs=81.5
Q ss_pred hcceece-eecCceEEEEEecCCCCCCCceEEEEEEecCCC------------cchhhHhHHHHHHHHHhcCCCce--ee
Q 007935 345 ASAYVVG-KSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD------------ATWRFKDFESEVEAIARVQHPNI--VR 409 (584)
Q Consensus 345 ~~~~~iG-~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~------------~~~~~~~f~~Ei~~l~~l~HpnI--V~ 409 (584)
..+.+|| .|+.|+||++...+ ..++||+..... .......+.+|++++.+++|++| ++
T Consensus 34 ~~~~~lg~~~g~gtv~~v~~~~-------~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~ 106 (239)
T PRK01723 34 QQARVVGSAKGRGTTWFVQTPG-------VNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPR 106 (239)
T ss_pred hcCceeecCCCCccEEEEEeCC-------ceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCce
Confidence 4567898 89999999998863 578998885421 01223568899999999998875 77
Q ss_pred eeEEEEeCCc----eeEeeecccC-CcHHHHH--------------------hccc--ccccCCCCccccccCeEEecCC
Q 007935 410 LKAFYYANDE----KLLISDFIRN-GSLYAAL--------------------HGFG--LNRLLPGTSKVTKNETIVTSGT 462 (584)
Q Consensus 410 l~g~~~~~~~----~~lV~Ey~~~-GsL~~~L--------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~ 462 (584)
.+++...+.. .++||||+++ .+|.+++ |+.| |+|+.+.|+.+..++.+...|+
T Consensus 107 pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~~~l~~~~~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDf 186 (239)
T PRK01723 107 PIAARVVRHGLFYRADILIERIEGARDLVALLQEAPLSEEQWQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDF 186 (239)
T ss_pred eEeeeeeecCcceeeeEEEEecCCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEEC
Confidence 7877554322 3599999997 6886553 4444 6788888888776666666777
Q ss_pred Ccc
Q 007935 463 GSR 465 (584)
Q Consensus 463 ~~~ 465 (584)
+..
T Consensus 187 g~~ 189 (239)
T PRK01723 187 DRG 189 (239)
T ss_pred CCc
Confidence 643
|
|
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=98.01 E-value=1.5e-05 Score=84.62 Aligned_cols=112 Identities=13% Similarity=0.141 Sum_probs=78.7
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcc---------------------------------hhh-----
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT---------------------------------WRF----- 389 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~---------------------------------~~~----- 389 (584)
+-||+|++|.||+|++.++| +.||||+.+..... +..
T Consensus 125 ~PlasaSiaQVh~A~l~~~G-----~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ 199 (537)
T PRK04750 125 KPLASASIAQVHFARLKDNG-----REVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHD 199 (537)
T ss_pred hhhcCCCccEEEEEEECCCC-----CEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHH
Confidence 57999999999999998833 89999999754110 000
Q ss_pred -HhHHHHHHHHHhcC----CCceeeeeEEEEe-CCceeEeeecccCCcHHHH--Hh------------------------
Q 007935 390 -KDFESEVEAIARVQ----HPNIVRLKAFYYA-NDEKLLISDFIRNGSLYAA--LH------------------------ 437 (584)
Q Consensus 390 -~~f~~Ei~~l~~l~----HpnIV~l~g~~~~-~~~~~lV~Ey~~~GsL~~~--L~------------------------ 437 (584)
-+|.+|+..+.+++ +.+.|.+-.++.+ ....+|||||++|+.+.++ +.
T Consensus 200 ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif~~ 279 (537)
T PRK04750 200 ELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVFRD 279 (537)
T ss_pred hhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHHhC
Confidence 13556666666553 4445555455544 4678899999999998653 22
Q ss_pred cccccccCCCCccccccC----eEEecCCCc
Q 007935 438 GFGLNRLLPGTSKVTKNE----TIVTSGTGS 464 (584)
Q Consensus 438 ~~g~~~~~~~~~~i~~~~----~~~~~~~~~ 464 (584)
++-|+|.+++|..+..++ .++..|+|.
T Consensus 280 GffHaDpHPGNIlv~~~g~~~~~i~llDFGi 310 (537)
T PRK04750 280 GFFHADMHPGNIFVSYDPPENPRYIALDFGI 310 (537)
T ss_pred CeeeCCCChHHeEEecCCCCCCeEEEEecce
Confidence 345899999999888776 777778774
|
|
| >PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B | Back alignment and domain information |
|---|
Probab=97.99 E-value=7e-06 Score=55.32 Aligned_cols=36 Identities=53% Similarity=0.631 Sum_probs=23.4
Q ss_pred CCCeeecccCCCCCCchHHhhccccCccEEEeccccCc
Q 007935 138 NLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFS 175 (584)
Q Consensus 138 ~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~ 175 (584)
+|++|+|++|+|+ .+|+.+.+|++|+ .|++++|+|+
T Consensus 2 ~L~~L~l~~N~i~-~l~~~l~~l~~L~-~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQIT-DLPPELSNLPNLE-TLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-S-SHGGHGTTCTTSS-EEEETSSCCS
T ss_pred cceEEEccCCCCc-ccCchHhCCCCCC-EEEecCCCCC
Confidence 5677777777776 5666666777776 6777777666
|
... |
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.73 E-value=1.8e-05 Score=86.64 Aligned_cols=158 Identities=18% Similarity=0.231 Sum_probs=96.9
Q ss_pred eceeecCceEEEEEecCCCCCCCceEEEEEEecCC--CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG--DATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 349 ~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
-+-+|.++.++-++-...+ ...++|..... ......+...++-.++-..+||-+++..--+......+||++|
T Consensus 811 p~qS~sp~ss~p~~pa~sg-----h~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~~~~ 885 (1205)
T KOG0606|consen 811 PSQSGSPSSSFPASPAGSG-----HTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLVGHY 885 (1205)
T ss_pred cccCCCCcccccCCccccc-----cccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchhhHH
Confidence 4667888888877655544 23333333222 1111223444555555555678888766555566788999999
Q ss_pred ccCCcHHHHHhccc---------------------------ccccCCCCccccccCeEEecCC-----------------
Q 007935 427 IRNGSLYAALHGFG---------------------------LNRLLPGTSKVTKNETIVTSGT----------------- 462 (584)
Q Consensus 427 ~~~GsL~~~L~~~g---------------------------~~~~~~~~~~i~~~~~~~~~~~----------------- 462 (584)
..+|+|...||.-| |++.++.+..+..++.....++
T Consensus 886 ~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~~sg 965 (1205)
T KOG0606|consen 886 LNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTTDLSG 965 (1205)
T ss_pred hccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCccccccccccccCcCCccc
Confidence 99999998888532 2222222211111110000000
Q ss_pred ---------------------C----cccccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCC
Q 007935 463 ---------------------G----SRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPE 512 (584)
Q Consensus 463 ---------------------~----~~~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~ 512 (584)
+ .....||+.|.+||... +......+|.|++|++++|.++|.+||....
T Consensus 966 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~l-g~~hgs~ad~~~~g~~l~e~l~g~pp~na~t 1039 (1205)
T KOG0606|consen 966 PSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILL-GRRHGSAADWWSSGVCLFEVLTGIPPFNAET 1039 (1205)
T ss_pred ccccCccccccccccccccccchhhccccccCCCcccCCcccc-cccCCCcchhhhhhhhhhhhhcCCCCCCCcc
Confidence 0 11236889999999855 4678889999999999999999999998543
|
|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00024 Score=74.75 Aligned_cols=55 Identities=16% Similarity=0.177 Sum_probs=46.1
Q ss_pred eEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeeccc
Q 007935 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIR 428 (584)
Q Consensus 373 ~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~ 428 (584)
.+|.|...+.... ...+...+-++.|+.+|||||++++..+.+.+..|||+|-+.
T Consensus 38 ~~vsVF~~~~~~~-~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~ 92 (690)
T KOG1243|consen 38 GPVSVFVYKRSNG-EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR 92 (690)
T ss_pred CceEEEEEeCCCc-hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc
Confidence 6888888877544 333556778899999999999999999999999999999864
|
|
| >PRK15386 type III secretion protein GogB; Provisional | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00026 Score=71.70 Aligned_cols=81 Identities=20% Similarity=0.414 Sum_probs=55.3
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCC-cccCCCCcccCCCCCCCeee
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHN-SFCGPIPDRIKTLKNLTHLD 143 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N-~l~~~~p~~~~~l~~L~~L~ 143 (584)
..++.|+++++.|+ .+|. ...+|++|+++++.--..+|..+ .++|+.|++++| .+. .+|. +|+.|+
T Consensus 52 ~~l~~L~Is~c~L~-sLP~---LP~sLtsL~Lsnc~nLtsLP~~L--P~nLe~L~Ls~Cs~L~-sLP~------sLe~L~ 118 (426)
T PRK15386 52 RASGRLYIKDCDIE-SLPV---LPNELTEITIENCNNLTTLPGSI--PEGLEKLTVCHCPEIS-GLPE------SVRSLE 118 (426)
T ss_pred cCCCEEEeCCCCCc-ccCC---CCCCCcEEEccCCCCcccCCchh--hhhhhheEccCccccc-cccc------ccceEE
Confidence 45789999999887 4452 23469999998843334677655 358999999998 554 5664 477777
Q ss_pred cccCCCC--CCchHHhh
Q 007935 144 LSSNLLN--GSLPEFLL 158 (584)
Q Consensus 144 ls~N~l~--~~~p~~~~ 158 (584)
|+.|.+. +.+|.++.
T Consensus 119 L~~n~~~~L~~LPssLk 135 (426)
T PRK15386 119 IKGSATDSIKNVPNGLT 135 (426)
T ss_pred eCCCCCcccccCcchHh
Confidence 7777642 35666554
|
|
| >KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00017 Score=64.61 Aligned_cols=82 Identities=28% Similarity=0.269 Sum_probs=46.5
Q ss_pred CCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCch--HHhhccccCccEE
Q 007935 90 SLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLP--EFLLDLRALTGTL 167 (584)
Q Consensus 90 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p--~~~~~l~~L~~~l 167 (584)
+...+||++|.+.. + ..|..++.|++|.|++|+|+..-|.--.-+++|+.|.|.+|.|. .+- .-+..+++|+ .|
T Consensus 43 ~~d~iDLtdNdl~~-l-~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~-~l~dl~pLa~~p~L~-~L 118 (233)
T KOG1644|consen 43 QFDAIDLTDNDLRK-L-DNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQ-ELGDLDPLASCPKLE-YL 118 (233)
T ss_pred ccceecccccchhh-c-ccCCCccccceEEecCCcceeeccchhhhccccceEEecCcchh-hhhhcchhccCCccc-ee
Confidence 45567777777753 2 35666677777777777777443433334556777777777664 111 1234445555 55
Q ss_pred EeccccCc
Q 007935 168 NLSFNQFS 175 (584)
Q Consensus 168 ~l~~N~l~ 175 (584)
.+-+|+.+
T Consensus 119 tll~Npv~ 126 (233)
T KOG1644|consen 119 TLLGNPVE 126 (233)
T ss_pred eecCCchh
Confidence 55555554
|
|
| >KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.44 E-value=4.6e-05 Score=73.67 Aligned_cols=86 Identities=21% Similarity=0.258 Sum_probs=35.2
Q ss_pred CCCCEEecCCCcccCC----CCcccCCCCCCCeeecccCCCCC--C--chHHhhccccCccEEEeccccCcc----ccCc
Q 007935 113 TNLVYLDLAHNSFCGP----IPDRIKTLKNLTHLDLSSNLLNG--S--LPEFLLDLRALTGTLNLSFNQFSG----QIPE 180 (584)
Q Consensus 113 ~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~ls~N~l~~--~--~p~~~~~l~~L~~~l~l~~N~l~~----~~p~ 180 (584)
++|+++....|++... +...|...+.|+.+.++.|.+.- . +-..|..++.|+ .|||..|-|+. .+-.
T Consensus 157 ~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~Le-vLdl~DNtft~egs~~Lak 235 (382)
T KOG1909|consen 157 PKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLE-VLDLRDNTFTLEGSVALAK 235 (382)
T ss_pred cceEEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcce-eeecccchhhhHHHHHHHH
Confidence 4445555555544311 11223334444555555554421 0 112334444444 45555554431 1223
Q ss_pred cccCCCCCcEEEeecCCCc
Q 007935 181 MYGHFPVMVSLDLRNNNLS 199 (584)
Q Consensus 181 ~~~~l~~L~~L~l~~N~l~ 199 (584)
.+..+++|+.|+++++.+.
T Consensus 236 aL~s~~~L~El~l~dcll~ 254 (382)
T KOG1909|consen 236 ALSSWPHLRELNLGDCLLE 254 (382)
T ss_pred Hhcccchheeecccccccc
Confidence 3334444444544444443
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0012 Score=59.56 Aligned_cols=75 Identities=23% Similarity=0.274 Sum_probs=54.6
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCcee-eeeEEEEeCCceeEeeec
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV-RLKAFYYANDEKLLISDF 426 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV-~l~g~~~~~~~~~lV~Ey 426 (584)
+.++.|.++.||++...+ ..|++|........ ...+.+|++++..+.+.+++ +++++ ..+..++||||
T Consensus 4 ~~l~~G~~~~vy~~~~~~-------~~~~lK~~~~~~~~--~~~~~~E~~~l~~l~~~~~~P~~~~~--~~~~~~lv~e~ 72 (170)
T cd05151 4 SPLKGGMTNKNYRVEVAN-------KKYVVRIPGNGTEL--LINRENEAENSKLAAEAGIGPKLYYF--DPETGVLITEF 72 (170)
T ss_pred eecCCcccCceEEEEECC-------eEEEEEeCCCCccc--ccCHHHHHHHHHHHHHhCCCCceEEE--eCCCCeEEEEe
Confidence 357889999999998652 68999987654321 24578999999999765554 44443 33456899999
Q ss_pred ccCCcHH
Q 007935 427 IRNGSLY 433 (584)
Q Consensus 427 ~~~GsL~ 433 (584)
+++.++.
T Consensus 73 i~G~~l~ 79 (170)
T cd05151 73 IEGSELL 79 (170)
T ss_pred cCCCccc
Confidence 9998774
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >KOG2982 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.29 E-value=2.2e-05 Score=74.05 Aligned_cols=86 Identities=31% Similarity=0.269 Sum_probs=54.7
Q ss_pred CCCCCEEEccCCCCCCC--CcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCC-chHHhhccccCc
Q 007935 88 LNSLTRLSLASNNFSKP--IPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGS-LPEFLLDLRALT 164 (584)
Q Consensus 88 l~~L~~L~l~~n~l~~~--~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~-~p~~~~~l~~L~ 164 (584)
.+.++.|||.+|.|+.. +-.-+.+|+.|++|+|++|++...|-..-..+.+|+.|-|.+..+... .-..+.+++.++
T Consensus 70 ~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vt 149 (418)
T KOG2982|consen 70 VTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVT 149 (418)
T ss_pred hhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhhh
Confidence 45677888888888752 333455778888888888888754432223456777777777766532 233455666666
Q ss_pred cEEEeccccC
Q 007935 165 GTLNLSFNQF 174 (584)
Q Consensus 165 ~~l~l~~N~l 174 (584)
.|.+|.|.+
T Consensus 150 -elHmS~N~~ 158 (418)
T KOG2982|consen 150 -ELHMSDNSL 158 (418)
T ss_pred -hhhhccchh
Confidence 666666633
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.00023 Score=73.98 Aligned_cols=208 Identities=18% Similarity=0.126 Sum_probs=125.8
Q ss_pred eeceeecCceEEEEEec-CCCCCCCceEEEEEEecCCCcch-hhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEee
Q 007935 348 YVVGKSKNGIMYKVVVG-RGSGMGAPTVVAVRRLTEGDATW-RFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~-~~~~~~~~~~vAvK~l~~~~~~~-~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
..||.|.|+.|++.... .++ ..+++|.+.+..... ....-..|+.+...+ .|.+++++...+....+.|+--
T Consensus 271 ~~i~~~~~~~~~~~~~r~~~~-----~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~ 345 (524)
T KOG0601|consen 271 SKISDGNFSSVFKVSKRPEGD-----CIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPL 345 (524)
T ss_pred EEccCCccccceeeeecCCCC-----ceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCch
Confidence 56999999999998865 343 789999987763222 112335677777777 6999999988888888889999
Q ss_pred ecccCCcHHHHH-------------------------hc--ccccccCCCCccccccC-eEEecCCC--------ccccc
Q 007935 425 DFIRNGSLYAAL-------------------------HG--FGLNRLLPGTSKVTKNE-TIVTSGTG--------SRISA 468 (584)
Q Consensus 425 Ey~~~GsL~~~L-------------------------~~--~g~~~~~~~~~~i~~~~-~~~~~~~~--------~~~~~ 468 (584)
||++++++.... |. +-+.|..+.|+.+..++ .....+++ .....
T Consensus 346 e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~~~~~~ 425 (524)
T KOG0601|consen 346 EFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFSSGVFH 425 (524)
T ss_pred hhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhccccccccccceeccccc
Confidence 999999874332 11 23344566666655531 11111111 11122
Q ss_pred CCCccc-CccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHH
Q 007935 469 ISNVYL-APEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAK 547 (584)
Q Consensus 469 gt~~y~-aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 547 (584)
.+.+++ .+|.+.....+..+.|+||||.-+.|.++|..--.. . .+|... .....+ ......
T Consensus 426 ~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~----~---~~~~~i-~~~~~p-------~~~~~~--- 487 (524)
T KOG0601|consen 426 HIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSES----G---VQSLTI-RSGDTP-------NLPGLK--- 487 (524)
T ss_pred ccccccccchhhccccccccccccccccccccccccCcccCcc----c---ccceee-eccccc-------CCCchH---
Confidence 333455 355556556788999999999999999998743211 1 111100 001111 010000
Q ss_pred HHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhh
Q 007935 548 RQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581 (584)
Q Consensus 548 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 581 (584)
.....++.....+++..||.+.+.....+..
T Consensus 488 ---~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~ 518 (524)
T KOG0601|consen 488 ---LQLQVLLKVMINPDRKRRPSAVELSLHSEFY 518 (524)
T ss_pred ---HhhhhhhhhhcCCccccchhhhhhcccchhh
Confidence 1222344457888999999998877655433
|
|
| >KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.27 E-value=5.9e-05 Score=70.34 Aligned_cols=62 Identities=24% Similarity=0.274 Sum_probs=31.5
Q ss_pred CCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCC--cccCCCCcccCCCCCCCeeecccCCCC
Q 007935 87 LLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHN--SFCGPIPDRIKTLKNLTHLDLSSNLLN 150 (584)
Q Consensus 87 ~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N--~l~~~~p~~~~~l~~L~~L~ls~N~l~ 150 (584)
.+..|+.|++.+..++. -..+..|++|+.|.+|.| ++++.++....++++|++|+|+.|++.
T Consensus 41 ~~~~le~ls~~n~gltt--~~~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~ 104 (260)
T KOG2739|consen 41 EFVELELLSVINVGLTT--LTNFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIK 104 (260)
T ss_pred cccchhhhhhhccceee--cccCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCccc
Confidence 33444445555444442 123445556666666666 444444444444566666666666554
|
|
| >KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.27 E-value=8.9e-05 Score=71.71 Aligned_cols=155 Identities=18% Similarity=0.232 Sum_probs=107.7
Q ss_pred CCEEEEEcCCCCCc----cc---------CCccccCCCCCCEEEccCCCCCCC----CcccccCCCCCCEEecCCCcccC
Q 007935 65 NRVTSLYLPNRNLT----GY---------MPSELGLLNSLTRLSLASNNFSKP----IPANLFNATNLVYLDLAHNSFCG 127 (584)
Q Consensus 65 ~~v~~l~l~~~~l~----~~---------~~~~~~~l~~L~~L~l~~n~l~~~----~p~~~~~l~~L~~L~l~~N~l~~ 127 (584)
..+++|+|.||++. +. .....+.-+.|+++..+.|.+... +...|...+.|+.+.++.|.|..
T Consensus 120 ~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~ 199 (382)
T KOG1909|consen 120 TDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRP 199 (382)
T ss_pred cCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHHHHHHHHhccccceEEEecccccC
Confidence 35889999999875 12 233455667899999999998642 22346677899999999998852
Q ss_pred C----CCcccCCCCCCCeeecccCCCCC----CchHHhhccccCccEEEeccccCccccCccc-----cCCCCCcEEEee
Q 007935 128 P----IPDRIKTLKNLTHLDLSSNLLNG----SLPEFLLDLRALTGTLNLSFNQFSGQIPEMY-----GHFPVMVSLDLR 194 (584)
Q Consensus 128 ~----~p~~~~~l~~L~~L~ls~N~l~~----~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~-----~~l~~L~~L~l~ 194 (584)
. +...|..+++|+.|||..|-|+- .+-..+..++.|+ .|+++++.++..--..| ...++|+.|.|.
T Consensus 200 eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~-El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~ 278 (382)
T KOG1909|consen 200 EGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLR-ELNLGDCLLENEGAIAFVDALKESAPSLEVLELA 278 (382)
T ss_pred chhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchhe-eecccccccccccHHHHHHHHhccCCCCceeccC
Confidence 1 22356788999999999999873 2445677888888 99999998864322222 236789999999
Q ss_pred cCCCccCCC-----CCCCccccCCcccCCCC
Q 007935 195 NNNLSGEIP-----QVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 195 ~N~l~~~~p-----~~~~~~~~~~~~~~~n~ 220 (584)
+|.++-.-- .....+.+..+.++||.
T Consensus 279 gNeIt~da~~~la~~~~ek~dL~kLnLngN~ 309 (382)
T KOG1909|consen 279 GNEITRDAALALAACMAEKPDLEKLNLNGNR 309 (382)
T ss_pred cchhHHHHHHHHHHHHhcchhhHHhcCCccc
Confidence 999874210 11223445566777876
|
|
| >KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.00061 Score=61.12 Aligned_cols=104 Identities=23% Similarity=0.210 Sum_probs=67.9
Q ss_pred CEEEccCCCCCCCCccccc-CCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEec
Q 007935 92 TRLSLASNNFSKPIPANLF-NATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLS 170 (584)
Q Consensus 92 ~~L~l~~n~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~ 170 (584)
+.++|.+.++.. -+.++ -+.+...+||+.|.+.- + +.|..++.|.+|.|++|+|+..-|.--.-++.|. .|.|.
T Consensus 22 ~e~~LR~lkip~--ienlg~~~d~~d~iDLtdNdl~~-l-~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~-~L~Lt 96 (233)
T KOG1644|consen 22 RELDLRGLKIPV--IENLGATLDQFDAIDLTDNDLRK-L-DNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLK-TLILT 96 (233)
T ss_pred cccccccccccc--hhhccccccccceecccccchhh-c-ccCCCccccceEEecCCcceeeccchhhhccccc-eEEec
Confidence 455666555531 12222 23467788999999852 2 3577888999999999999855554444456677 88888
Q ss_pred cccCcccc-CccccCCCCCcEEEeecCCCcc
Q 007935 171 FNQFSGQI-PEMYGHFPVMVSLDLRNNNLSG 200 (584)
Q Consensus 171 ~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~ 200 (584)
+|.|...- -+-+..+++|++|.+-+|..+.
T Consensus 97 nNsi~~l~dl~pLa~~p~L~~Ltll~Npv~~ 127 (233)
T KOG1644|consen 97 NNSIQELGDLDPLASCPKLEYLTLLGNPVEH 127 (233)
T ss_pred CcchhhhhhcchhccCCccceeeecCCchhc
Confidence 88876211 1234567778888888877664
|
|
| >PRK15386 type III secretion protein GogB; Provisional | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.00082 Score=68.16 Aligned_cols=111 Identities=21% Similarity=0.299 Sum_probs=70.0
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCC-CCCCCCcccccCCCCCCEEecCCCccc--CCCCcccCCCCCCCe
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASN-NFSKPIPANLFNATNLVYLDLAHNSFC--GPIPDRIKTLKNLTH 141 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n-~l~~~~p~~~~~l~~L~~L~l~~N~l~--~~~p~~~~~l~~L~~ 141 (584)
..|+.|+++++.--..+|+.+. .+|+.|++++| ++. .+|. +|+.|++++|... +.+|. +|+.
T Consensus 72 ~sLtsL~Lsnc~nLtsLP~~LP--~nLe~L~Ls~Cs~L~-sLP~------sLe~L~L~~n~~~~L~~LPs------sLk~ 136 (426)
T PRK15386 72 NELTEITIENCNNLTTLPGSIP--EGLEKLTVCHCPEIS-GLPE------SVRSLEIKGSATDSIKNVPN------GLTS 136 (426)
T ss_pred CCCcEEEccCCCCcccCCchhh--hhhhheEccCccccc-cccc------ccceEEeCCCCCcccccCcc------hHhh
Confidence 4699999988443346676553 58999999998 554 4664 4778888877653 24444 4666
Q ss_pred eecccCCCC--CCchHHhhcc-ccCccEEEeccccCccccCccccCCCCCcEEEeecCC
Q 007935 142 LDLSSNLLN--GSLPEFLLDL-RALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNN 197 (584)
Q Consensus 142 L~ls~N~l~--~~~p~~~~~l-~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 197 (584)
|.+.+++.. ..+|. .+ ++|+ .|++++|... .+|+.+. .+|+.|+++.|.
T Consensus 137 L~I~~~n~~~~~~lp~---~LPsSLk-~L~Is~c~~i-~LP~~LP--~SLk~L~ls~n~ 188 (426)
T PRK15386 137 LSINSYNPENQARIDN---LISPSLK-TLSLTGCSNI-ILPEKLP--ESLQSITLHIEQ 188 (426)
T ss_pred eecccccccccccccc---ccCCccc-EEEecCCCcc-cCccccc--ccCcEEEecccc
Confidence 666443211 11121 12 4667 8999888765 3444333 478889988773
|
|
| >KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.00041 Score=76.20 Aligned_cols=134 Identities=22% Similarity=0.275 Sum_probs=95.4
Q ss_pred CCEEEEEcCCCCCcccC-Ccccc-CCCCCCEEEccCCCCCCC-CcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCe
Q 007935 65 NRVTSLYLPNRNLTGYM-PSELG-LLNSLTRLSLASNNFSKP-IPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTH 141 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~-~~~~~-~l~~L~~L~l~~n~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~ 141 (584)
.+++.|++++......- |..++ .||+|++|.+++=.+... +-.-..++++|..||+|+.+++.. ..++.|++|+.
T Consensus 122 ~nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl--~GIS~LknLq~ 199 (699)
T KOG3665|consen 122 QNLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL--SGISRLKNLQV 199 (699)
T ss_pred HhhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc--HHHhccccHHH
Confidence 46888888876654221 33343 479999999998777542 122345789999999999999843 66888999999
Q ss_pred eecccCCCCC-CchHHhhccccCccEEEeccccCcccc------CccccCCCCCcEEEeecCCCccC
Q 007935 142 LDLSSNLLNG-SLPEFLLDLRALTGTLNLSFNQFSGQI------PEMYGHFPVMVSLDLRNNNLSGE 201 (584)
Q Consensus 142 L~ls~N~l~~-~~p~~~~~l~~L~~~l~l~~N~l~~~~------p~~~~~l~~L~~L~l~~N~l~~~ 201 (584)
|-+.+=.+.. ..=..+.+|++|+ .||+|........ -+.-..||+|+.||.|++.++..
T Consensus 200 L~mrnLe~e~~~~l~~LF~L~~L~-vLDIS~~~~~~~~~ii~qYlec~~~LpeLrfLDcSgTdi~~~ 265 (699)
T KOG3665|consen 200 LSMRNLEFESYQDLIDLFNLKKLR-VLDISRDKNNDDTKIIEQYLECGMVLPELRFLDCSGTDINEE 265 (699)
T ss_pred HhccCCCCCchhhHHHHhcccCCC-eeeccccccccchHHHHHHHHhcccCccccEEecCCcchhHH
Confidence 8888777652 2224688899999 9999987654221 12334588999999998888764
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0014 Score=62.07 Aligned_cols=83 Identities=13% Similarity=0.195 Sum_probs=62.9
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCC--CceeeeeEEEEeCC---ceeE
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQH--PNIVRLKAFYYAND---EKLL 422 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~H--pnIV~l~g~~~~~~---~~~l 422 (584)
+.|+.|..+.||++...++ ..+++|.............+.+|++++..+++ .++.+++.+....+ ..++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g------~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~ 77 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGG------RRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFY 77 (223)
T ss_pred eecCCCccceEEEEEecCC------cceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceE
Confidence 3588999999999988663 67999988664332233678999999999975 44677887776543 6789
Q ss_pred eeecccCCcHHHHH
Q 007935 423 ISDFIRNGSLYAAL 436 (584)
Q Consensus 423 V~Ey~~~GsL~~~L 436 (584)
||||++++++.+.+
T Consensus 78 v~e~i~G~~l~~~~ 91 (223)
T cd05154 78 VMERVDGRVLRDRL 91 (223)
T ss_pred EEEEeCCEecCCCC
Confidence 99999998876544
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >COG0661 AarF Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0025 Score=67.46 Aligned_cols=121 Identities=20% Similarity=0.256 Sum_probs=82.0
Q ss_pred chhhHhhhcc-eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcch-----------------------------
Q 007935 338 ELEDLLRASA-YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATW----------------------------- 387 (584)
Q Consensus 338 ~~~~l~~~~~-~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~----------------------------- 387 (584)
.++++...++ +-|+.++-|.||+|++.+| +.||||+.+.+-.+.
T Consensus 120 ~iee~F~eF~~~PiAsASIaQVH~A~L~sG------~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~ 193 (517)
T COG0661 120 PIEELFSEFEPEPIASASIAQVHRAVLKSG------EEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVE 193 (517)
T ss_pred CHHHHHHHcCCCchhhhhHhhheeEEecCC------CEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHH
Confidence 3445544444 6789999999999999997 899999987652211
Q ss_pred hh----------HhHHHHHHHHHhcC----CCceeeeeEEEEe-CCceeEeeecccCCcHHHH--H--------------
Q 007935 388 RF----------KDFESEVEAIARVQ----HPNIVRLKAFYYA-NDEKLLISDFIRNGSLYAA--L-------------- 436 (584)
Q Consensus 388 ~~----------~~f~~Ei~~l~~l~----HpnIV~l~g~~~~-~~~~~lV~Ey~~~GsL~~~--L-------------- 436 (584)
.. =++.+|+.-+.+++ +.-=|++=..|++ .+...|+|||++|-.+.+. +
T Consensus 194 vv~e~~~~l~~ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~ 273 (517)
T COG0661 194 VVDEFEKRLREELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELL 273 (517)
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHH
Confidence 00 12455665555552 2222233334443 5678999999998766433 1
Q ss_pred ----------hcccccccCCCCccccccCeEEecCCCc
Q 007935 437 ----------HGFGLNRLLPGTSKVTKNETIVTSGTGS 464 (584)
Q Consensus 437 ----------~~~g~~~~~~~~~~i~~~~~~~~~~~~~ 464 (584)
++|=|+|.+++|..+..++.++..|+|.
T Consensus 274 ~~~f~~q~~~dgffHaDpHpGNi~v~~~g~i~~lDfGi 311 (517)
T COG0661 274 VRAFLRQLLRDGFFHADPHPGNILVRSDGRIVLLDFGI 311 (517)
T ss_pred HHHHHHHHHhcCccccCCCccceEEecCCcEEEEcCcc
Confidence 3456899999999999998888888874
|
|
| >KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.00062 Score=63.65 Aligned_cols=91 Identities=23% Similarity=0.237 Sum_probs=68.3
Q ss_pred CcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccC--CCCCCchHHhhccccCccEEEeccccCccccCcc-
Q 007935 105 IPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSN--LLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEM- 181 (584)
Q Consensus 105 ~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N--~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~- 181 (584)
+..-.-....|+.|.+.+-.++.. ..|..|++|+.|.+|.| +.++.++.....+++|+ +|+|++|++.- +++
T Consensus 35 ~~gl~d~~~~le~ls~~n~gltt~--~~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~-~l~ls~Nki~~--lstl 109 (260)
T KOG2739|consen 35 LGGLTDEFVELELLSVINVGLTTL--TNFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLK-VLNLSGNKIKD--LSTL 109 (260)
T ss_pred cccccccccchhhhhhhccceeec--ccCCCcchhhhhcccCCcccccccceehhhhCCcee-EEeecCCcccc--cccc
Confidence 333344556677777777777632 24667899999999999 77778887778889999 99999999872 333
Q ss_pred --ccCCCCCcEEEeecCCCcc
Q 007935 182 --YGHFPVMVSLDLRNNNLSG 200 (584)
Q Consensus 182 --~~~l~~L~~L~l~~N~l~~ 200 (584)
+..+.+|..|++.+|..++
T Consensus 110 ~pl~~l~nL~~Ldl~n~~~~~ 130 (260)
T KOG2739|consen 110 RPLKELENLKSLDLFNCSVTN 130 (260)
T ss_pred chhhhhcchhhhhcccCCccc
Confidence 3456778899999997775
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 584 | ||||
| 3riz_A | 772 | Crystal Structure Of The Plant Steroid Receptor Bri | 2e-14 | ||
| 3rgx_A | 768 | Structural Insight Into Brassinosteroid Perception | 3e-14 | ||
| 4gs6_A | 315 | Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz | 1e-09 | ||
| 2eva_A | 307 | Structural Basis For The Interaction Of Tak1 Kinase | 2e-09 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 1e-07 | ||
| 3kul_B | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 4e-07 | ||
| 3kul_A | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 4e-07 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 5e-07 | ||
| 2qok_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 6e-07 | ||
| 2qoo_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 7e-07 | ||
| 1jpa_A | 312 | Crystal Structure Of Unphosphorylated Ephb2 Recepto | 8e-07 | ||
| 2hen_A | 286 | Crystal Structure Of The Ephb2 Receptor Kinase Doma | 8e-07 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 9e-07 | ||
| 2qol_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596:y | 9e-07 | ||
| 1ogq_A | 313 | The Crystal Structure Of Pgip (Polygalacturonase In | 9e-07 | ||
| 1ogq_A | 313 | The Crystal Structure Of Pgip (Polygalacturonase In | 6e-04 | ||
| 3fxx_A | 371 | Human Epha3 Kinase And Juxtamembrane Region Bound T | 9e-07 | ||
| 1mqb_A | 333 | Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro | 1e-06 | ||
| 2gsf_A | 373 | The Human Epha3 Receptor Tyrosine Kinase And Juxtam | 1e-06 | ||
| 2qoi_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 1e-06 | ||
| 2qof_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f | 1e-06 | ||
| 2qod_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y602f | 1e-06 | ||
| 3dzq_A | 361 | Human Epha3 Kinase Domain In Complex With Inhibitor | 1e-06 | ||
| 2qoc_A | 344 | Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp | 1e-06 | ||
| 4e6d_A | 298 | Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W | 2e-06 | ||
| 2hel_A | 306 | Crystal Structure Of A Mutant Epha4 Kinase Domain ( | 2e-06 | ||
| 2xa4_A | 298 | Inhibitors Of Jak2 Kinase Domain Length = 298 | 2e-06 | ||
| 2xyu_A | 285 | Crystal Structure Of Epha4 Kinase Domain In Complex | 3e-06 | ||
| 2y6m_A | 291 | Crystal Structure Of Epha4 Kinase Domain Length = 2 | 3e-06 | ||
| 2hk5_A | 270 | Hck Kinase In Complex With Lck Targetted Inhibitor | 3e-06 | ||
| 1qcf_A | 454 | Crystal Structure Of Hck In Complex With A Src Fami | 3e-06 | ||
| 2qo7_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Dephos | 4e-06 | ||
| 2qon_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 4e-06 | ||
| 3tjc_A | 298 | Co-Crystal Structure Of Jak2 With Thienopyridine 8 | 4e-06 | ||
| 3q32_A | 301 | Structure Of Janus Kinase 2 With A Pyrrolotriazine | 4e-06 | ||
| 3jy9_A | 311 | Janus Kinase 2 Inhibitors Length = 311 | 4e-06 | ||
| 2b7a_A | 293 | The Structural Basis Of Janus Kinase 2 Inhibition B | 4e-06 | ||
| 3e62_A | 293 | Fragment Based Discovery Of Jak-2 Inhibitors Length | 4e-06 | ||
| 4aqc_A | 301 | Triazolopyridine-Based Inhibitor Of Janus Kinase 2 | 4e-06 | ||
| 4hge_A | 300 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 | 4e-06 | ||
| 3rvg_A | 303 | Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido | 4e-06 | ||
| 3io7_A | 313 | 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel | 5e-06 | ||
| 4e4m_A | 302 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 3 | 5e-06 | ||
| 2qob_A | 344 | Human Epha3 Kinase Domain, Base Structure Length = | 5e-06 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 5e-06 | ||
| 3tl8_A | 349 | The Avrptob-Bak1 Complex Reveals Two Structurally S | 5e-06 | ||
| 3lpb_A | 295 | Crystal Structure Of Jak2 Complexed With A Potent 2 | 5e-06 | ||
| 2w1i_A | 326 | Structure Determination Of Aurora Kinase In Complex | 5e-06 | ||
| 4aw5_A | 291 | Complex Of The Ephb4 Kinase Domain With An Oxindole | 5e-06 | ||
| 4bbe_A | 298 | Aminoalkylpyrimidine Inhibitor Complexes With Jak2 | 6e-06 | ||
| 2dq7_X | 283 | Crystal Structure Of Fyn Kinase Domain Complexed Wi | 7e-06 | ||
| 2vwu_A | 302 | Ephb4 Kinase Domain Inhibitor Complex Length = 302 | 8e-06 | ||
| 3s95_A | 310 | Crystal Structure Of The Human Limk1 Kinase Domain | 9e-06 | ||
| 1ad5_A | 438 | Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | 1e-05 | ||
| 3kmm_A | 288 | Structure Of Human Lck Kinase With A Small Molecule | 1e-05 | ||
| 2zm1_A | 285 | Crystal Structure Of Imidazo Pyrazin 1 Bound To The | 1e-05 | ||
| 3kxz_A | 287 | The Complex Crystal Structure Of Lck With A Probe M | 1e-05 | ||
| 2pl0_A | 289 | Lck Bound To Imatinib Length = 289 | 1e-05 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 1e-05 | ||
| 1qpe_A | 279 | Structural Analysis Of The Lymphocyte-Specific Kina | 1e-05 | ||
| 3bys_A | 277 | Co-Crystal Structure Of Lck And Aminopyrimidine Ami | 1e-05 | ||
| 2ofu_A | 273 | X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam | 1e-05 | ||
| 3bym_A | 272 | X-Ray Co-Crystal Structure Aminobenzimidazole Triaz | 1e-05 | ||
| 1qpd_A | 279 | Structural Analysis Of The Lymphocyte-specific Kina | 1e-05 | ||
| 2ofv_A | 277 | Crystal Structure Of Aminoquinazoline 1 Bound To Lc | 1e-05 | ||
| 2of2_A | 271 | Crystal Structure Of Furanopyrimidine 8 Bound To Lc | 1e-05 | ||
| 3lck_A | 271 | The Kinase Domain Of Human Lymphocyte Kinase (Lck), | 1e-05 | ||
| 2r2p_A | 295 | Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep | 2e-05 | ||
| 3g51_A | 325 | Structural Diversity Of The Active Conformation Of | 2e-05 | ||
| 2og8_A | 265 | Crystal Structure Of Aminoquinazoline 36 Bound To L | 2e-05 | ||
| 3mpm_A | 267 | Lck Complexed With A Pyrazolopyrimidine Length = 26 | 2e-05 | ||
| 4el9_A | 305 | Structure Of N-Terminal Kinase Domain Of Rsk2 With | 3e-05 | ||
| 3ubd_A | 304 | Structure Of N-Terminal Domain Of Rsk2 Kinase In Co | 3e-05 | ||
| 3uim_A | 326 | Structural Basis For The Impact Of Phosphorylation | 3e-05 | ||
| 4aoj_A | 329 | Human Trka In Complex With The Inhibitor Az-23 Leng | 3e-05 | ||
| 3geq_A | 286 | Structural Basis For The Chemical Rescue Of Src Kin | 4e-05 | ||
| 4gt5_A | 306 | Crystal Structure Of The Inactive Trka Kinase Domai | 4e-05 | ||
| 4f0i_A | 300 | Crystal Structure Of Apo Trka Length = 300 | 4e-05 | ||
| 3dqw_A | 286 | C-Src Kinase Domain Thr338ile Mutant In Complex Wit | 4e-05 | ||
| 2ptk_A | 453 | Chicken Src Tyrosine Kinase Length = 453 | 4e-05 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 5e-05 | ||
| 3svv_A | 286 | Crystal Structure Of T338c C-Src Covalently Bound T | 5e-05 | ||
| 2hwo_A | 286 | Crystal Structure Of Src Kinase Domain In Complex W | 5e-05 | ||
| 3d7u_B | 277 | Structural Basis For The Recognition Of C-Src By It | 5e-05 | ||
| 2oiq_A | 286 | Crystal Structure Of Chicken C-Src Kinase Domain In | 5e-05 | ||
| 3u4w_A | 275 | Src In Complex With Dna-Templated Macrocyclic Inhib | 5e-05 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 5e-05 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 6e-05 | ||
| 4e7w_A | 394 | Structure Of Gsk3 From Ustilago Maydis Length = 394 | 6e-05 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 6e-05 | ||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 6e-05 | ||
| 1o9u_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 7e-05 | ||
| 1h8f_A | 352 | Glycogen Synthase Kinase 3 Beta. Length = 352 | 8e-05 | ||
| 1uv5_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With 6-Br | 9e-05 | ||
| 1yoj_A | 283 | Crystal Structure Of Src Kinase Domain Length = 283 | 1e-04 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 1e-04 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 1e-04 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 1e-04 | ||
| 2rei_A | 318 | Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep | 2e-04 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 2e-04 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 2e-04 | ||
| 3p86_A | 309 | Crystal Structure Of Ctr1 Kinase Domain Mutant D676 | 2e-04 | ||
| 3fpq_A | 290 | Crystal Structure Of The Kinase Domain Of Wnk1 Leng | 2e-04 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 2e-04 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 2e-04 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 2e-04 | ||
| 4e1z_A | 291 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 2e-04 | ||
| 3f7z_A | 350 | X-ray Co-crystal Structure Of Glycogen Synthase Kin | 3e-04 | ||
| 3hng_A | 360 | Crystal Structure Of Vegfr1 In Complex With N-(4-ch | 3e-04 | ||
| 4e20_A | 290 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 3e-04 | ||
| 1gng_A | 378 | Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With | 3e-04 | ||
| 3dtc_A | 271 | Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp | 3e-04 | ||
| 3say_A | 430 | Crystal Structure Of Human Glycogen Synthase Kinase | 3e-04 | ||
| 2ow3_A | 352 | Glycogen Synthase Kinase-3 Beta In Complex With Bis | 3e-04 | ||
| 3zrk_A | 371 | Identification Of 2-(4-Pyridyl)thienopyridinones As | 3e-04 | ||
| 3f88_A | 349 | Glycogen Synthase Kinase 3beta Inhibitor Complex Le | 3e-04 | ||
| 4afj_A | 367 | 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec | 3e-04 | ||
| 3zdi_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 3e-04 | ||
| 4dit_A | 382 | Crystal Structure Of Gsk3beta In Complex With A Imi | 3e-04 | ||
| 3a4o_X | 286 | Lyn Kinase Domain Length = 286 | 3e-04 | ||
| 3gb2_A | 353 | Gsk3beta Inhibitor Complex Length = 353 | 3e-04 | ||
| 2o5k_A | 372 | Crystal Structure Of Gsk3beta In Complex With A Ben | 3e-04 | ||
| 3omv_A | 307 | Crystal Structure Of C-Raf (Raf-1) Length = 307 | 3e-04 | ||
| 3dxn_A | 287 | Crystal Structure Of The Calcium-dependent Kinase F | 4e-04 | ||
| 3sd0_A | 350 | Identification Of A Glycogen Synthase Kinase-3b Inh | 4e-04 | ||
| 3hzt_A | 467 | Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4 | 4e-04 | ||
| 1r0e_A | 391 | Glycogen Synthase Kinase-3 Beta In Complex With 3-I | 4e-04 | ||
| 1pyx_A | 422 | Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | 4e-04 | ||
| 1i09_A | 420 | Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len | 4e-04 | ||
| 3d7u_A | 263 | Structural Basis For The Recognition Of C-Src By It | 4e-04 | ||
| 1q5k_A | 414 | Crystal Structure Of Glycogen Synthase Kinase 3 In | 4e-04 | ||
| 1byg_A | 278 | Kinase Domain Of Human C-Terminal Src Kinase (Csk) | 4e-04 | ||
| 4acc_A | 465 | Gsk3b In Complex With Inhibitor Length = 465 | 4e-04 | ||
| 1q3d_A | 424 | Gsk-3 Beta Complexed With Staurosporine Length = 42 | 5e-04 | ||
| 2z7q_A | 321 | Crystal Structure Of The N-Terminal Kinase Domain O | 6e-04 |
| >pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1 Ectodomain Length = 772 | Back alignment and structure |
|
| >pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1 Length = 768 | Back alignment and structure |
|
| >pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315 | Back alignment and structure |
|
| >pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312 | Back alignment and structure |
|
| >pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase Inhibiting Protein), A Leucine Rich Repeat Protein Involved In Plant Defense Length = 313 | Back alignment and structure |
|
| >pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase Inhibiting Protein), A Leucine Rich Repeat Protein Involved In Plant Defense Length = 313 | Back alignment and structure |
|
| >pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371 | Back alignment and structure |
|
| >pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333 | Back alignment and structure |
|
| >pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373 | Back alignment and structure |
|
| >pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361 | Back alignment and structure |
|
| >pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344 | Back alignment and structure |
|
| >pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298 | Back alignment and structure |
|
| >pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306 | Back alignment and structure |
|
| >pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285 | Back alignment and structure |
|
| >pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270 | Back alignment and structure |
|
| >pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454 | Back alignment and structure |
|
| >pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373 | Back alignment and structure |
|
| >pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298 | Back alignment and structure |
|
| >pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311 | Back alignment and structure |
|
| >pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293 | Back alignment and structure |
|
| >pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301 | Back alignment and structure |
|
| >pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300 | Back alignment and structure |
|
| >pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313 | Back alignment and structure |
|
| >pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349 | Back alignment and structure |
|
| >pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295 | Back alignment and structure |
|
| >pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298 | Back alignment and structure |
|
| >pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283 | Back alignment and structure |
|
| >pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302 | Back alignment and structure |
|
| >pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310 | Back alignment and structure |
|
| >pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | Back alignment and structure |
|
| >pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288 | Back alignment and structure |
|
| >pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285 | Back alignment and structure |
|
| >pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287 | Back alignment and structure |
|
| >pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277 | Back alignment and structure |
|
| >pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273 | Back alignment and structure |
|
| >pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272 | Back alignment and structure |
|
| >pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277 | Back alignment and structure |
|
| >pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271 | Back alignment and structure |
|
| >pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271 | Back alignment and structure |
|
| >pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295 | Back alignment and structure |
|
| >pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325 | Back alignment and structure |
|
| >pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265 | Back alignment and structure |
|
| >pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267 | Back alignment and structure |
|
| >pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305 | Back alignment and structure |
|
| >pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304 | Back alignment and structure |
|
| >pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326 | Back alignment and structure |
|
| >pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329 | Back alignment and structure |
|
| >pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286 | Back alignment and structure |
|
| >pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300 | Back alignment and structure |
|
| >pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286 | Back alignment and structure |
|
| >pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286 | Back alignment and structure |
|
| >pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277 | Back alignment and structure |
|
| >pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286 | Back alignment and structure |
|
| >pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
| >pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350 | Back alignment and structure |
|
| >pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352 | Back alignment and structure |
|
| >pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350 | Back alignment and structure |
|
| >pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
| >pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350 | Back alignment and structure |
|
| >pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360 | Back alignment and structure |
|
| >pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290 | Back alignment and structure |
|
| >pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378 | Back alignment and structure |
|
| >pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271 | Back alignment and structure |
|
| >pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430 | Back alignment and structure |
|
| >pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352 | Back alignment and structure |
|
| >pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371 | Back alignment and structure |
|
| >pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349 | Back alignment and structure |
|
| >pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367 | Back alignment and structure |
|
| >pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350 | Back alignment and structure |
|
| >pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382 | Back alignment and structure |
|
| >pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286 | Back alignment and structure |
|
| >pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353 | Back alignment and structure |
|
| >pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307 | Back alignment and structure |
|
| >pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350 | Back alignment and structure |
|
| >pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467 | Back alignment and structure |
|
| >pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391 | Back alignment and structure |
|
| >pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | Back alignment and structure |
|
| >pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420 | Back alignment and structure |
|
| >pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263 | Back alignment and structure |
|
| >pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414 | Back alignment and structure |
|
| >pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278 | Back alignment and structure |
|
| >pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465 | Back alignment and structure |
|
| >pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424 | Back alignment and structure |
|
| >pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 172 bits (439), Expect = 2e-49
Identities = 57/221 (25%), Positives = 87/221 (39%), Gaps = 36/221 (16%)
Query: 23 NQDGLALLALKAAIAQDPTRALDSWSES-DSTPCHWSGIHCIR----NRVTSLYLPNRNL 77
QD ALL +K + L SW + D W G+ C RV +L L NL
Sbjct: 5 PQDKQALLQIKKDLGNPT--TLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNL 62
Query: 78 ---------------------------TGYMPSELGLLNSLTRLSLASNNFSKPIPANLF 110
G +P + L L L + N S IP L
Sbjct: 63 PKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLS 122
Query: 111 NATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLS 170
LV LD ++N+ G +P I +L NL + N ++G++P+ L ++ +S
Sbjct: 123 QIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTIS 182
Query: 171 FNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ-VGSLLN 210
N+ +G+IP + + + +DL N L G+ GS N
Sbjct: 183 RNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKN 222
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 166 bits (422), Expect = 7e-47
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 5/165 (3%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTR-LSLASNNFSKPIPANLFNATNLVYLDLAHNSFC 126
+ ++G +P G + L ++++ N + IP N NL ++DL+ N
Sbjct: 152 VGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLSRNMLE 210
Query: 127 GPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFP 186
G + KN + L+ N L L + + + L L+L N+ G +P+
Sbjct: 211 GDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLN-GLDLRNNRIYGTLPQGLTQLK 268
Query: 187 VMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGLCGFPLQSPC 231
+ SL++ NNL GEIPQ G+L +A++ N LCG PL C
Sbjct: 269 FLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPL-PAC 312
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 178 bits (455), Expect = 3e-48
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 15/206 (7%)
Query: 14 FPAPLCFSLNQDGLALLALKAAIAQDPTRALDSWSESDSTPCHWSGIHCIRNRVTSLYLP 73
F A SL ++ L++ K + D L WS S+ PC + G+ C ++VTS+ L
Sbjct: 2 FQASPSQSLYREIHQLISFKDVL-PDKN-LLPDWS-SNKNPCTFDGVTCRDDKVTSIDLS 58
Query: 74 NRNLT---GYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIP 130
++ L + S L L L L L++++ + + + +L LDL+ NS GP+
Sbjct: 59 SKPLNVGFSAVSSSLLSLTGLESLFLSNSHINGSVS-GFKCSASLTSLDLSRNSLSGPVT 117
Query: 131 DR--IKTLKNLTHLDLSSNLLNGSLP-EFLLDLRALTGTLNLSFNQFSGQIPE---MYGH 184
+ + L L++SSN L+ L L +L L+LS N SG +
Sbjct: 118 TLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLE-VLDLSANSISGANVVGWVLSDG 176
Query: 185 FPVMVSLDLRNNNLSGEIPQVGSLLN 210
+ L + N +SG++ V +N
Sbjct: 177 CGELKHLAISGNKISGDVD-VSRCVN 201
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 170 bits (434), Expect = 2e-45
Identities = 53/179 (29%), Positives = 86/179 (48%), Gaps = 1/179 (0%)
Query: 62 CIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLA 121
+ G +L L++ ++ S + N ++++LD++
Sbjct: 581 DGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMS 640
Query: 122 HNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEM 181
+N G IP I ++ L L+L N ++GS+P+ + DLR L L+LS N+ G+IP+
Sbjct: 641 YNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGL-NILDLSSNKLDGRIPQA 699
Query: 182 YGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGLCGFPLQSPCPEPENPKVH 240
++ +DL NNNLSG IP++G P F NPGLCG+PL P + H
Sbjct: 700 MSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPRCDPSNADGYAH 758
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 145 bits (367), Expect = 8e-37
Identities = 49/143 (34%), Positives = 70/143 (48%), Gaps = 1/143 (0%)
Query: 61 HCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDL 120
+N + LYL N TG +P L + L L L+ N S IP++L + + L L L
Sbjct: 390 QNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKL 449
Query: 121 AHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPE 180
N G IP + +K L L L N L G +P L + L ++LS N+ +G+IP+
Sbjct: 450 WLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLN-WISLSNNRLTGEIPK 508
Query: 181 MYGHFPVMVSLDLRNNNLSGEIP 203
G + L L NN+ SG IP
Sbjct: 509 WIGRLENLAILKLSNNSFSGNIP 531
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 144 bits (366), Expect = 1e-36
Identities = 52/140 (37%), Positives = 67/140 (47%), Gaps = 4/140 (2%)
Query: 68 TSLYLPNRNLTGYMPSELG-LLNSLTRLSLASNNFSKPIPANLFN--ATNLVYLDLAHNS 124
L L +G +P L L SL L L+SNNFS PI NL L L L +N
Sbjct: 346 KVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNG 405
Query: 125 FCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGH 184
F G IP + L L LS N L+G++P L L L L L N G+IP+ +
Sbjct: 406 FTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLR-DLKLWLNMLEGEIPQELMY 464
Query: 185 FPVMVSLDLRNNNLSGEIPQ 204
+ +L L N+L+GEIP
Sbjct: 465 VKTLETLILDFNDLTGEIPS 484
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 141 bits (357), Expect = 2e-35
Identities = 52/141 (36%), Positives = 72/141 (51%), Gaps = 5/141 (3%)
Query: 68 TSLYLPNRNLTGYMPSE-LGLLNSLTRLSLASNNFSKPIPANLFNAT-NLVYLDLAHNSF 125
SL L + N +G +P + L + L L L+ N FS +P +L N + +L+ LDL+ N+F
Sbjct: 321 ESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNF 380
Query: 126 CGPIPDRI--KTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYG 183
GPI + L L L +N G +P L + L +L+LSFN SG IP G
Sbjct: 381 SGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELV-SLHLSFNYLSGTIPSSLG 439
Query: 184 HFPVMVSLDLRNNNLSGEIPQ 204
+ L L N L GEIPQ
Sbjct: 440 SLSKLRDLKLWLNMLEGEIPQ 460
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 138 bits (350), Expect = 1e-34
Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 50 SDSTPCHWSGIHCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANL 109
S + W + L + ++G + + +L L ++SNNFS IP L
Sbjct: 164 SGANVVGWVLSDGCGE-LKHLAISGNKISGDVD--VSRCVNLEFLDVSSNNFSTGIPF-L 219
Query: 110 FNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNL 169
+ + L +LD++ N G I T L L++SSN G +P L++L L+L
Sbjct: 220 GDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLP--LKSLQ-YLSL 276
Query: 170 SFNQFSGQIP-EMYGHFPVMVSLDLRNNNLSGEIP 203
+ N+F+G+IP + G + LDL N+ G +P
Sbjct: 277 AENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVP 311
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 132 bits (334), Expect = 1e-32
Identities = 54/140 (38%), Positives = 73/140 (52%), Gaps = 6/140 (4%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNSFC 126
L + + G +P L SL LSLA N F+ IP L L LDL+ N F
Sbjct: 250 KLLNISSNQFVGPIPPLP--LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFY 307
Query: 127 GPIPDRIKTLKNLTHLDLSSNLLNGSLP-EFLLDLRALTGTLNLSFNQFSGQIPEMYGHF 185
G +P + L L LSSN +G LP + LL +R L L+LSFN+FSG++PE +
Sbjct: 308 GAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLK-VLDLSFNEFSGELPESLTNL 366
Query: 186 PV-MVSLDLRNNNLSGEIPQ 204
+++LDL +NN SG I
Sbjct: 367 SASLLTLDLSSNNFSGPILP 386
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 130 bits (330), Expect = 4e-32
Identities = 47/136 (34%), Positives = 70/136 (51%), Gaps = 5/136 (3%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG 127
L L L G +P EL + +L L L N+ + IP+ L N TNL ++ L++N G
Sbjct: 445 RDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTG 504
Query: 128 PIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPV 187
IP I L+NL L LS+N +G++P L D R+L L+L+ N F+G IP
Sbjct: 505 EIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLI-WLDLNTNLFNGTIPAAMFKQ-- 561
Query: 188 MVSLDLRNNNLSGEIP 203
S + N ++G+
Sbjct: 562 --SGKIAANFIAGKRY 575
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 130 bits (328), Expect = 7e-32
Identities = 37/165 (22%), Positives = 64/165 (38%), Gaps = 22/165 (13%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG 127
+L L +LTG +PS L +L +SL++N + IP + NL L L++NSF G
Sbjct: 469 ETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSG 528
Query: 128 PIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLS----------------- 170
IP + ++L LDL++NL NG++P + ++
Sbjct: 529 NIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECH 588
Query: 171 ----FNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIP-QVGSLLN 210
+F G E ++ + G + +
Sbjct: 589 GAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGS 633
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 130 bits (329), Expect = 5e-34
Identities = 64/273 (23%), Positives = 100/273 (36%), Gaps = 87/273 (31%)
Query: 373 TVVAVRRLTEGDATWRF---KDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRN 429
T VAV++L + F+ E++ +A+ QH N+V L F D+ L+ ++ N
Sbjct: 55 TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPN 114
Query: 430 GSLYAALHG--------------------------------------------------- 438
GSL L
Sbjct: 115 GSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKI 174
Query: 439 --FGLNRLLPGTSKVTKNETIVTS---GT-GSRISAISNVYLAPEARIYGSKFTQKCDVY 492
FGL R ++ T++TS GT Y+APEA + G + T K D+Y
Sbjct: 175 SDFGLARASEKFAQ-----TVMTSRIVGTTA---------YMAPEA-LRG-EITPKSDIY 218
Query: 493 SFGIVLLEILTGRLP-DAGPENDGKGLESLV---RKAFRERRPLSEVIDPALVKEIHAKR 548
SFG+VLLEI+TG D E + L+ + E + + + ID +
Sbjct: 219 SFGVVLLEIITGLPAVDEHREP-----QLLLDIKEEIEDEEKTIEDYIDKKM--NDADST 271
Query: 549 QVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
V A + +A C RP ++ V + L +
Sbjct: 272 SVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 9e-30
Identities = 74/307 (24%), Positives = 118/307 (38%), Gaps = 94/307 (30%)
Query: 339 LEDLLRA-----SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFE 393
L DL A +++G G +YK V+ G VA++R T + ++FE
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDG------AKVALKRRTPESSQ-GIEEFE 83
Query: 394 SEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLY-------------------- 433
+E+E ++ +HP++V L F +E +LI ++ NG+L
Sbjct: 84 TEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLE 143
Query: 434 ----AA-----LHG-------------------------FGLNRLLPGTSK--VTKNETI 457
AA LH FG+++ + ++ T+
Sbjct: 144 ICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLS---TV 200
Query: 458 VTSGT-GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP-DAGPENDG 515
V GT G Y+ PE I G + T+K DVYSFG+VL E+L R
Sbjct: 201 V-KGTLG---------YIDPEYFIKG-RLTEKSDVYSFGVVLFEVLCARSAIVQSLP--- 246
Query: 516 KGLESLVR--KAFRERRPLSEVIDPALVKEIHAK--RQVLATFHIALNCTELDPEFRPRM 571
+ + +L L +++DP L +I + R+ A+ C L E RP M
Sbjct: 247 REMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGD---TAVKCLALSSEDRPSM 303
Query: 572 RTVSESL 578
V L
Sbjct: 304 GDVLWKL 310
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 6e-27
Identities = 26/141 (18%), Positives = 43/141 (30%), Gaps = 2/141 (1%)
Query: 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNS 124
+L L L L L L+ + ++L L L N
Sbjct: 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87
Query: 125 FCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQF-SGQIPEMYG 183
L +L L L + L+ L LN++ N S ++PE +
Sbjct: 88 IQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLK-ELNVAHNLIQSFKLPEYFS 146
Query: 184 HFPVMVSLDLRNNNLSGEIPQ 204
+ + LDL +N +
Sbjct: 147 NLTNLEHLDLSSNKIQSIYCT 167
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 113 bits (286), Expect = 8e-27
Identities = 32/140 (22%), Positives = 53/140 (37%), Gaps = 4/140 (2%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNSFC 126
L L + M S L L L +N + ++F + NL+YLD++H
Sbjct: 376 KYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTR 434
Query: 127 GPIPDRIKTLKNLTHLDLSSNLLNGSL-PEFLLDLRALTGTLNLSFNQFSGQIPEMYGHF 185
L +L L ++ N + P+ +LR LT L+LS Q P +
Sbjct: 435 VAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLT-FLDLSQCQLEQLSPTAFNSL 493
Query: 186 PVMVSLDLRNNNLSGEIPQV 205
+ L++ +NN
Sbjct: 494 SSLQVLNMSHNNFFSLDTFP 513
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 1e-26
Identities = 40/165 (24%), Positives = 55/165 (33%), Gaps = 5/165 (3%)
Query: 68 TSLYLPNRNLTGYMP-SELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFC 126
L + NL S L +L L ++ + ++L L +A NSF
Sbjct: 399 EHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQ 458
Query: 127 GPI-PDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHF 185
PD L+NLT LDLS L P L +L LN+S N F Y
Sbjct: 459 ENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQ-VLNMSHNNFFSLDTFPYKCL 517
Query: 186 PVMVSLDLRNNNLSGEIPQVGSLLNQGPTAF--SGNPGLCGFPLQ 228
+ LD N++ Q + N C Q
Sbjct: 518 NSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQ 562
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 107 bits (268), Expect = 2e-24
Identities = 31/148 (20%), Positives = 50/148 (33%), Gaps = 6/148 (4%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG 127
L L + L+ L+ L L N ++L L +
Sbjct: 55 QVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLAS 114
Query: 128 PIPDRIKTLKNLTHLDLSSNLLNG-SLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFP 186
I LK L L+++ NL+ LPE+ +L L L+LS N+
Sbjct: 115 LENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLE-HLDLSSNKIQSIYCTDLRVLH 173
Query: 187 ----VMVSLDLRNNNLSGEIPQVGSLLN 210
+ +SLDL N ++ P +
Sbjct: 174 QMPLLNLSLDLSLNPMNFIQPGAFKEIR 201
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 1e-23
Identities = 28/139 (20%), Positives = 49/139 (35%), Gaps = 5/139 (3%)
Query: 74 NRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRI 133
N +P L S L L+ N + F+ L LDL+
Sbjct: 16 ELNFY-KIPD--NLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAY 72
Query: 134 KTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDL 193
++L +L+ L L+ N + L +L L + GH + L++
Sbjct: 73 QSLSHLSTLILTGNPIQSLALGAFSGLSSLQ-KLVAVETNLASLENFPIGHLKTLKELNV 131
Query: 194 RNNNL-SGEIPQVGSLLNQ 211
+N + S ++P+ S L
Sbjct: 132 AHNLIQSFKLPEYFSNLTN 150
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 87.4 bits (217), Expect = 3e-18
Identities = 31/141 (21%), Positives = 49/141 (34%), Gaps = 10/141 (7%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHN--SF 125
L L N L SL RL+ SN + +L +LDL+ N SF
Sbjct: 307 QHLELVNCKFGQ---FPTLKLKSLKRLTFTSNKGGNAFS--EVDLPSLEFLDLSRNGLSF 361
Query: 126 CGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIP-EMYGH 184
G +L +LDLS N + F L L L L+ + ++
Sbjct: 362 KGCCSQSDFGTTSLKYLDLSFNGVITMSSNF-LGLEQLE-HLDFQHSNLKQMSEFSVFLS 419
Query: 185 FPVMVSLDLRNNNLSGEIPQV 205
++ LD+ + + +
Sbjct: 420 LRNLIYLDISHTHTRVAFNGI 440
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 86.6 bits (215), Expect = 5e-18
Identities = 34/142 (23%), Positives = 50/142 (35%), Gaps = 8/142 (5%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSK-PIPANLFNATNLVYLDLAHNSFC 126
L NL +G L +L L++A N +P N TNL +LDL+ N
Sbjct: 103 QKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ 162
Query: 127 GPIPDRIKTLKNLT----HLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPE-M 181
++ L + LDLS N +N P ++R L L L N S + +
Sbjct: 163 SIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIR-LH-KLTLRNNFDSLNVMKTC 220
Query: 182 YGHFPVMVSLDLRNNNLSGEIP 203
+ L E
Sbjct: 221 IQGLAGLEVHRLVLGEFRNEGN 242
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 5e-13
Identities = 22/161 (13%), Positives = 42/161 (26%), Gaps = 14/161 (8%)
Query: 50 SDSTPCHWSGIHCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANL 109
+H + SL L + P + L +L+L +N S +
Sbjct: 162 QSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIR-LHKLTLRNNFDSLNVMKTC 220
Query: 110 FNA-TNLVYLDLAHNSFCGPI---PDRIKTLKNLTHLDLSSNLLN------GSLPEFLLD 159
L L F L+ L +L + L + +
Sbjct: 221 IQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNC 280
Query: 160 LRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSG 200
L ++ + +L + + L+L N
Sbjct: 281 LTNVS-SFSLVSVTIERVKD--FSYNFGWQHLELVNCKFGQ 318
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 9e-09
Identities = 21/108 (19%), Positives = 42/108 (38%), Gaps = 5/108 (4%)
Query: 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFN-ATNLVYLDLAHNS 124
+ L + + N LNSL L + N+ L + ++L +L+L N
Sbjct: 495 SLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQND 554
Query: 125 F-CG-PIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLS 170
F C ++ +K+ L + + + P + L +LN++
Sbjct: 555 FACTCEHQSFLQWIKDQRQLLVEVERMECATPSDKQGMPVL--SLNIT 600
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 2e-26
Identities = 30/207 (14%), Positives = 59/207 (28%), Gaps = 20/207 (9%)
Query: 21 SLNQDGLALLALKAAIAQDP-------TRALDSWSESDSTPCHWSGIHCI----RNRVTS 69
+D LAL + A+ T+ +W+ + W + RVT
Sbjct: 27 EYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKE-LDMWGAQPGVSLNSNGRVTG 85
Query: 70 LYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKP----IPANLFNATNLVYLDLAHNSF 125
L L +G +P +G L L L+L S+ P + + +
Sbjct: 86 LSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHY 145
Query: 126 CGPIPDRIK--TLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYG 183
D +L ++S+ S+ + T + N + + +
Sbjct: 146 QKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDT-QIGQLSNNITF-VSKAVM 203
Query: 184 HFPVMVSLDLRNNNLSGEIPQVGSLLN 210
+ + N+ E
Sbjct: 204 RLTKLRQFYMGNSPFVAENICEAWENE 230
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 2e-25
Identities = 38/185 (20%), Positives = 66/185 (35%), Gaps = 25/185 (13%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFS-------KPIPANLFNATNLVYLDL 120
+S+ L N ++ + + L+ ++L N + K N N L +DL
Sbjct: 436 SSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDL 495
Query: 121 AHNSFCGPIPDRIK--TLKNLTHLDLSSNLLNGSLPEFLLDLRALTG-----TLNLSFNQ 173
N + D + TL L +DLS N + P L+ L G + N+
Sbjct: 496 RFNKLTK-LSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNR 553
Query: 174 FSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGS---LLNQGPTAFSGNPGLCGFPLQSP 230
+ PE P + L + +N++ ++ +L+ NP L
Sbjct: 554 TLREWPEGITLCPSLTQLQIGSNDIRKVNEKITPNISVLD-----IKDNP-NISIDLSYV 607
Query: 231 CPEPE 235
CP E
Sbjct: 608 CPYIE 612
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 1e-24
Identities = 36/153 (23%), Positives = 58/153 (37%), Gaps = 12/153 (7%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNSFC 126
L L G +P G L L+LA N ++ IPAN + L AHN
Sbjct: 333 GMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQITE-IPANFCGFTEQVENLSFAHNKLK 390
Query: 127 G-PIPDRIKTLKNLTHLDLSSNLLNG-------SLPEFLLDLRALTGTLNLSFNQFSGQI 178
P K++ ++ +D S N + L ++ ++NLS NQ S
Sbjct: 391 YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVS-SINLSNNQISKFP 449
Query: 179 PEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQ 211
E++ + S++L N L+ N+
Sbjct: 450 KELFSTGSPLSSINLMGNMLTEIPKNSLKDENE 482
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 3e-24
Identities = 27/154 (17%), Positives = 57/154 (37%), Gaps = 13/154 (8%)
Query: 68 TSLYLPNRNL-TGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFC 126
+Y+ NL T + + L + L L N +PA + L L+LA+N
Sbjct: 308 QIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGKLPA-FGSEIKLASLNLAYNQIT 366
Query: 127 GPIPDRIKTLKNLTHLDLSSNLLNGSLPE--FLLDLRALTGTLNLSFNQFSG-------Q 177
+ + + +L + N L +P + ++ ++ S+N+
Sbjct: 367 EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMS-AIDFSYNEIGSVDGKNFDP 424
Query: 178 IPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQ 211
+ + S++L NN +S ++ S +
Sbjct: 425 LDPTPFKGINVSSINLSNNQISKFPKELFSTGSP 458
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 2e-22
Identities = 23/171 (13%), Positives = 57/171 (33%), Gaps = 30/171 (17%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNA--------------- 112
T + + N+T + + L L + + ++ F +
Sbjct: 186 TQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLK 244
Query: 113 ----TNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTG--- 165
+L +++ + +P +K L + ++++ N S + D +AL
Sbjct: 245 WDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGI-SGEQLKDDWQALADAPV 303
Query: 166 -----TLNLSFNQF-SGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLN 210
+ + +N + + + L+ N L G++P GS +
Sbjct: 304 GEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGKLPAFGSEIK 354
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 2e-22
Identities = 26/159 (16%), Positives = 57/159 (35%), Gaps = 17/159 (10%)
Query: 68 TSLYLPNRNLTGYMPS-ELGLLNSLTRLSLASNNFSK-------PIPANLFNATNLVYLD 119
+L + L + ++ ++ + + N P+ F N+ ++
Sbjct: 380 ENLSFAHNKLKYIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSIN 439
Query: 120 LAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNG-------SLPEFLLDLRALTGTLNLSFN 172
L++N + T L+ ++L N+L E + LT +++L FN
Sbjct: 440 LSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLT-SIDLRFN 498
Query: 173 QFSGQIPEM-YGHFPVMVSLDLRNNNLSGEIPQVGSLLN 210
+ + + P +V +DL N+ S Q +
Sbjct: 499 KLTKLSDDFRATTLPYLVGIDLSYNSFSKFPTQPLNSST 537
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 99.0 bits (247), Expect = 6e-22
Identities = 22/166 (13%), Positives = 51/166 (30%), Gaps = 30/166 (18%)
Query: 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSF 125
+ + + + + T++ SNN + + + T L + ++ F
Sbjct: 160 DLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPF 218
Query: 126 CGP-------------------IPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGT 166
+ LK+LT +++ + LP FL L +
Sbjct: 219 VAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQ-L 277
Query: 167 LNLSFNQF--------SGQIPEMYGHFPVMVSLDLRNNNL-SGEIP 203
+N++ N+ Q + + + NNL + +
Sbjct: 278 INVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVE 323
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 95.5 bits (238), Expect = 8e-21
Identities = 30/164 (18%), Positives = 55/164 (33%), Gaps = 18/164 (10%)
Query: 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF--NATNLVYLDLAH 122
N +T + +N LT + L N +K + + LV +DL++
Sbjct: 467 NMLTEI---PKNSLKDENENFKNTYLLTSIDLRFNKLTK-LSDDFRATTLPYLVGIDLSY 522
Query: 123 NSFCGPIPDRIKTLKNLTHLDLSSNL------LNGSLPEFLLDLRALTGTLNLSFNQFSG 176
NSF P + L + + PE + +LT L + N
Sbjct: 523 NSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLT-QLQIGSNDIRK 580
Query: 177 QIPEMYGHFPVMVSLDLRNNNLSG-EIPQVGSLLNQGPTAFSGN 219
+ E P + LD+++N ++ V + G +
Sbjct: 581 -VNE--KITPNISVLDIKDNPNISIDLSYVCPYIEAGMYMLFYD 621
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 92.4 bits (230), Expect = 9e-20
Identities = 26/140 (18%), Positives = 45/140 (32%), Gaps = 14/140 (10%)
Query: 68 TSLYLPNRNLTGYMPSELGLLN--SLTRLSLASNNFSKPIPANLFNATNLVYL------D 119
TS+ L LT + + L + L+ N+FSK P N++ L D
Sbjct: 491 TSIDLRFNKLTK-LSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRD 548
Query: 120 LAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIP 179
N P+ I +LT L + SN + + ++ L++ N
Sbjct: 549 AQGNRTLREWPEGITLCPSLTQLQIGSNDIRKVNEKITPNIS----VLDIKDNPNISIDL 604
Query: 180 EMYGHFPVMVSLDLRNNNLS 199
+ L +
Sbjct: 605 SYVCPYIEAGMYMLFYDKTQ 624
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 75.8 bits (187), Expect = 1e-14
Identities = 20/196 (10%), Positives = 47/196 (23%), Gaps = 31/196 (15%)
Query: 20 FSLNQDGLALLALKAAIAQDPTRALDSWSESDSTPCHWSGIHCIRNRVTSLYLPNRNLTG 79
+ + L+ A +D + W + G
Sbjct: 12 LTDDAIVPIKLSRTAEYIKDYLALKEIWDALNGKNWSQQGFGT----------------- 54
Query: 80 YMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNL 139
+ + + + +L + + L L G +PD I L L
Sbjct: 55 -------QPGANWNFNKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTEL 107
Query: 140 THLDLSSNLLNG----SLPEFLLDLRALTGTLNLSFNQFSGQIPEMYG--HFPVMVSLDL 193
L L S+ P+ + + + + F ++ +
Sbjct: 108 EVLALGSHGEKVNERLFGPKGISANMSDE-QKQKMRMHYQKTFVDYDPREDFSDLIKDCI 166
Query: 194 RNNNLSGEIPQVGSLL 209
++ I + +
Sbjct: 167 NSDPQQKSIKKSSRIT 182
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 4e-25
Identities = 52/296 (17%), Positives = 92/296 (31%), Gaps = 73/296 (24%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNI 407
V + + G ++K + VAV+ D +W+ E EV ++ ++H NI
Sbjct: 31 VKARGRFGCVWKAQL-LN------EYVAVKIFPIQDKQSWQN---EYEVYSLPGMKHENI 80
Query: 408 VRLKAF----YYANDEKLLISDFIRNGSLYAALHGF----------------GLNRL--- 444
++ + + LI+ F GSL L GL L
Sbjct: 81 LQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHED 140
Query: 445 ---LPGTSK--------------VTKNET---------IVTSGTGSRISAISNV----YL 474
L K + N T + S V Y+
Sbjct: 141 IPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYM 200
Query: 475 APE----ARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGK-GLESLV--RKAFR 527
APE A + + D+Y+ G+VL E+ + GP ++ E + +
Sbjct: 201 APEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLE 260
Query: 528 ERRPL--SEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
+ + + + P L + C + D E R V E + ++
Sbjct: 261 DMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQM 316
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 2e-24
Identities = 34/145 (23%), Positives = 48/145 (33%), Gaps = 1/145 (0%)
Query: 67 VTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFC 126
+T L L + L + + LT L + N SK P L L+L HN
Sbjct: 27 ITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELS 86
Query: 127 GPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFP 186
NLT L L SN + + + L TL+LS N S
Sbjct: 87 QLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLI-TLDLSHNGLSSTKLGTQVQLE 145
Query: 187 VMVSLDLRNNNLSGEIPQVGSLLNQ 211
+ L L NN + + +
Sbjct: 146 NLQELLLSNNKIQALKSEELDIFAN 170
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 8e-24
Identities = 38/148 (25%), Positives = 52/148 (35%), Gaps = 3/148 (2%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG 127
L L + L+ +LT L L SN+ K NL+ LDL+HN
Sbjct: 76 KVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSS 135
Query: 128 PIPDRIKTLKNLTHLDLSSNLLNGSLPEFL--LDLRALTGTLNLSFNQFSGQIPEMYGHF 185
L+NL L LS+N + E L +L L LS NQ P +
Sbjct: 136 TKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLK-KLELSSNQIKEFSPGCFHAI 194
Query: 186 PVMVSLDLRNNNLSGEIPQVGSLLNQGP 213
+ L L N L + + L
Sbjct: 195 GRLFGLFLNNVQLGPSLTEKLCLELANT 222
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 1e-23
Identities = 33/153 (21%), Positives = 58/153 (37%), Gaps = 4/153 (2%)
Query: 50 SDSTPCHWSGIHCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANL 109
S T + + + + + L L ++ L L L L N + +
Sbjct: 366 SLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQE 425
Query: 110 F-NATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNG--SLPEFLLDLRALTGT 166
+ N+ + L++N + + + +L L L L S P LR LT
Sbjct: 426 WRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLT-I 484
Query: 167 LNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLS 199
L+LS N + +M + LDL++NNL+
Sbjct: 485 LDLSNNNIANINDDMLEGLEKLEILDLQHNNLA 517
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 4e-23
Identities = 40/148 (27%), Positives = 55/148 (37%), Gaps = 11/148 (7%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSK--PIPANLFNATNLVYLDLAHNSF 125
+YL + L+ SL RL L P+ NL LDL++N+
Sbjct: 433 FEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNI 492
Query: 126 CGPIPDRIKTLKNLTHLDLSSNLLN--------GSLPEFLLDLRALTGTLNLSFNQFSGQ 177
D ++ L+ L LDL N L G FL L L LNL N F
Sbjct: 493 ANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLH-ILNLESNGFDEI 551
Query: 178 IPEMYGHFPVMVSLDLRNNNLSGEIPQV 205
E++ + +DL NNL+ V
Sbjct: 552 PVEVFKDLFELKIIDLGLNNLNTLPASV 579
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 2e-22
Identities = 32/138 (23%), Positives = 52/138 (37%), Gaps = 4/138 (2%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG 127
+ LT +P L ++T L+L N + AN + L LD+ N+
Sbjct: 7 EVADCSHLKLTQ-VPD--DLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISK 63
Query: 128 PIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPV 187
P+ + L L L+L N L+ + LT L+L N +
Sbjct: 64 LEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLT-ELHLMSNSIQKIKNNPFVKQKN 122
Query: 188 MVSLDLRNNNLSGEIPQV 205
+++LDL +N LS
Sbjct: 123 LITLDLSHNGLSSTKLGT 140
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 99.3 bits (248), Expect = 5e-22
Identities = 36/144 (25%), Positives = 53/144 (36%), Gaps = 6/144 (4%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANL--FNATNLVYLDLAHNSF 125
+L L + L+ L +L L L++N L F ++L L+L+ N
Sbjct: 124 ITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQI 183
Query: 126 CGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTG--TLNLSFNQFSGQIPEMYG 183
P + L L L++ L SL E L A T L+LS +Q S +
Sbjct: 184 KEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFL 243
Query: 184 HFPVM--VSLDLRNNNLSGEIPQV 205
LDL NNL+
Sbjct: 244 GLKWTNLTMLDLSYNNLNVVGNDS 267
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 95.8 bits (239), Expect = 7e-21
Identities = 31/170 (18%), Positives = 57/170 (33%), Gaps = 12/170 (7%)
Query: 52 STPCHWSGIHCIRNRVTSLYLPNRNLTGYMPSELGLLN--SLTRLSLASNNFSKPIPANL 109
+ + + +L L N L+ + L +LT L L+ NN + +
Sbjct: 209 PSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSF 268
Query: 110 FNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSL---------PEFLLDL 160
L Y L +N+ + L N+ +L+L + S+ L
Sbjct: 269 AWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWL 328
Query: 161 RALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLN 210
+ L LN+ N G M+ + L L N+ S + ++
Sbjct: 329 KCLE-HLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVS 377
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 95.1 bits (237), Expect = 1e-20
Identities = 31/153 (20%), Positives = 56/153 (36%), Gaps = 8/153 (5%)
Query: 66 RVTSLYLPNRNLTGYMPSELGLLN--SLTRLSLASNNFSKPIPANLFNATNLVYLDLAHN 123
+ L L N + EL + SL +L L+SN + P L L L +
Sbjct: 146 NLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNV 205
Query: 124 SFCGPIPDRIK---TLKNLTHLDLSSNLLNGSLPEFL--LDLRALTGTLNLSFNQFSGQI 178
+ +++ ++ +L LS++ L+ + L LT L+LS+N +
Sbjct: 206 QLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLT-MLDLSYNNLNVVG 264
Query: 179 PEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQ 211
+ + P + L NN+ L
Sbjct: 265 NDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFN 297
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 95.1 bits (237), Expect = 1e-20
Identities = 33/160 (20%), Positives = 59/160 (36%), Gaps = 14/160 (8%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFS-KPIPANLF---NATNLVYLDLAHN 123
L + + ++ G + L +L LSL+++ S + + F + L L+L N
Sbjct: 332 EHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKN 391
Query: 124 SFCGPIPDRIKTLKNLTHLDLSSNLLNGSLP-EFLLDLRALTGTLNLSFNQFSGQIPEMY 182
D L +L LDL N + L + L + + LS+N++ +
Sbjct: 392 KISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIF-EIYLSYNKYLQLTRNSF 450
Query: 183 GHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGL 222
P + L LR L ++ P+ F L
Sbjct: 451 ALVPSLQRLMLRRVALKN--------VDSSPSPFQPLRNL 482
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 85.4 bits (212), Expect = 1e-17
Identities = 27/112 (24%), Positives = 40/112 (35%), Gaps = 2/112 (1%)
Query: 71 YLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIP 130
L G L L+ L L+L SN F + + L +DL N+
Sbjct: 518 RLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPA 577
Query: 131 DRIKTLKNLTHLDLSSNLLNGSLPE-FLLDLRALTGTLNLSFNQFSGQIPEM 181
+L L+L NL+ + F R LT L++ FN F +
Sbjct: 578 SVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLT-ELDMRFNPFDCTCESI 628
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 69.3 bits (170), Expect = 2e-12
Identities = 20/135 (14%), Positives = 36/135 (26%), Gaps = 9/135 (6%)
Query: 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSF 125
+ L L + L L + L NN + + N +L L+L N
Sbjct: 537 HLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLI 596
Query: 126 CGPIPDRIKT-LKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGH 184
+NLT LD+ N + + + +N + +
Sbjct: 597 TSVEKKVFGPAFRNLTELDMRFNPFDCTCE----SIAWFVNWINETHTNIPELSSHYLCN 652
Query: 185 FPVMVSLDLRNNNLS 199
P +
Sbjct: 653 TP----PHYHGFPVR 663
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 102 bits (255), Expect = 4e-24
Identities = 58/284 (20%), Positives = 94/284 (33%), Gaps = 75/284 (26%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+GK G KV R +G V+ ++ L D + + F EV+ + ++HPN++
Sbjct: 17 VLGKGCFGQAIKVTH-RETGE----VMVMKELIRFDEETQ-RTFLKEVKVMRCLEHPNVL 70
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHG------------------------------ 438
+ Y + I+++I+ G+L +
Sbjct: 71 KFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNII 130
Query: 439 ---------------------FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYL--A 475
FGL RL+ + + + + A
Sbjct: 131 HRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMA 190
Query: 476 PEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEV 535
PE I G + +K DV+SFGIVL EI+ D L + F R
Sbjct: 191 PEM-INGRSYDEKVDVFSFGIVLCEIIGRVNADPDY-LPRTMDFGLNVRGFL-DRYCPPN 247
Query: 536 IDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579
P+ F I + C +LDPE RP + L+
Sbjct: 248 CPPSF-------------FPITVRCCDLDPEKRPSFVKLEHWLE 278
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 100 bits (250), Expect = 2e-23
Identities = 54/261 (20%), Positives = 88/261 (33%), Gaps = 81/261 (31%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKL-LISDFIRNGS 431
VA++++ K F E+ ++RV HPNIV+ Y A + L+ ++ GS
Sbjct: 32 KDVAIKQIESESER---KAFIVELRQLSRVNHPNIVK---LYGACLNPVCLVMEYAEGGS 85
Query: 432 LYAALHGFGLNRLLP--------------------------------------------- 446
LY LHG
Sbjct: 86 LYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVL 145
Query: 447 -----GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEI 501
GT+ + T+ GS ++APE GS +++KCDV+S+GI+L E+
Sbjct: 146 KICDFGTACDIQTHM--TNNKGS------AAWMAPEV-FEGSNYSEKCDVFSWGIILWEV 196
Query: 502 LTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCT 561
+T R P + V R PL + + + + C
Sbjct: 197 ITRRKPFDEIGGPAFRIMWAVHN--GTRPPLIKNLPKPIESLMTR-------------CW 241
Query: 562 ELDPEFRPRMRTVSESLDRVK 582
DP RP M + + + +
Sbjct: 242 SKDPSQRPSMEEIVKIMTHLM 262
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 98.9 bits (247), Expect = 3e-23
Identities = 53/265 (20%), Positives = 86/265 (32%), Gaps = 80/265 (30%)
Query: 373 TVVAVRRLTEG---DATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRN 429
VAV+ D + ++ E + A ++HPNI+ L+ L+ +F R
Sbjct: 31 DEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARG 90
Query: 430 GSLYAALHG----------------FGLN------------RLL---------------- 445
G L L G G+N R L
Sbjct: 91 GPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDL 150
Query: 446 -PGTSKVT-------KNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIV 497
K+T + T S G+ ++APE I S F++ DV+S+G++
Sbjct: 151 SNKILKITDFGLAREWHRTTKMSAAGAY------AWMAPEV-IRASMFSKGSDVWSYGVL 203
Query: 498 LLEILTGRLPDAGPENDGKGLESLVRKAFRERRP-LSEVIDPALVKEIHAKRQVLATFHI 556
L E+LTG +P G + L A + + K +
Sbjct: 204 LWELLTGEVPFRGIDG----LAVAYGVAMNKLALPIPSTCPEPFAK-------------L 246
Query: 557 ALNCTELDPEFRPRMRTVSESLDRV 581
+C DP RP + + L +
Sbjct: 247 MEDCWNPDPHSRPSFTNILDQLTTI 271
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 95.1 bits (237), Expect = 1e-21
Identities = 52/260 (20%), Positives = 87/260 (33%), Gaps = 75/260 (28%)
Query: 373 TVVAVRRLTEGDAT-WRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGS 431
+ VAV+ L E D R +F EV + R++HPNIV ++++++ GS
Sbjct: 61 SDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGS 120
Query: 432 LYAALHGFGLNRLLP--------------------------------------------- 446
LY LH G L
Sbjct: 121 LYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKV 180
Query: 447 ---GTSKV-TKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEIL 502
G S++ S G+ ++APE + +K DVYSFG++L E+
Sbjct: 181 CDFGLSRLKASTFLSSKSAAGTP------EWMAPEV-LRDEPSNEKSDVYSFGVILWELA 233
Query: 503 TGRLPDAGPENDGKGLESLVRKAFRERRP-LSEVIDPALVKEIHAKRQVLATFHIALNCT 561
T + P + + F+ +R + ++P + I C
Sbjct: 234 TLQQPWGNLNP----AQVVAAVGFKCKRLEIPRNLNPQVAAIIE-------------GCW 276
Query: 562 ELDPEFRPRMRTVSESLDRV 581
+P RP T+ + L +
Sbjct: 277 TNEPWKRPSFATIMDLLRPL 296
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 94.3 bits (235), Expect = 1e-21
Identities = 46/254 (18%), Positives = 89/254 (35%), Gaps = 65/254 (25%)
Query: 375 VAVRRLTEGDAT-WRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKL-LISDFIRNGSL 432
VAV+ L T + + F++EV + + +H NI+ Y+ +L +++ + SL
Sbjct: 49 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG--YSTAPQLAIVTQWCEGSSL 106
Query: 433 YAALHG----FGLNRLLP----------------------------------------GT 448
Y LH F + +L+ G
Sbjct: 107 YHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGL 166
Query: 449 SKVTKNETIVTSGTGSRISAISNVYLAPEA--RIYGSKFTQKCDVYSFGIVLLEILTGRL 506
+ + S + ++APE + ++ + DVY+FGIVL E++TG+L
Sbjct: 167 ATEKSRWSGSHQFEQLSGSIL---WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQL 223
Query: 507 PDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPE 566
P + N + +E + R P + K + + C + +
Sbjct: 224 PYSNINNRDQIIEMVGRG---SLSPDLSKVRSNCPKRMK---------RLMAECLKKKRD 271
Query: 567 FRPRMRTVSESLDR 580
RP + ++
Sbjct: 272 ERPSFPRILAEIEE 285
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 97.0 bits (242), Expect = 3e-21
Identities = 27/140 (19%), Positives = 51/140 (36%), Gaps = 4/140 (2%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNSFC 126
L L + N M + L L L + + + F + L+YLD+++ +
Sbjct: 379 RHLDL-SFNGAIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTK 437
Query: 127 GPIPDRIKTLKNLTHLDLSSN-LLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHF 185
L +L L ++ N + +L + LT L+LS Q ++
Sbjct: 438 IDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLT-FLDLSKCQLEQISWGVFDTL 496
Query: 186 PVMVSLDLRNNNLSGEIPQV 205
+ L++ +NNL
Sbjct: 497 HRLQLLNMSHNNLLFLDSSH 516
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 93.9 bits (234), Expect = 2e-20
Identities = 32/144 (22%), Positives = 43/144 (29%), Gaps = 3/144 (2%)
Query: 82 PSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRI-KTLKNLT 140
S L L L ++ N T+L L +A NSF + NLT
Sbjct: 417 FSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLT 476
Query: 141 HLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSG 200
LDLS L L L LN+S N Y + +LD N +
Sbjct: 477 FLDLSKCQLEQISWGVFDTLHRLQ-LLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIET 535
Query: 201 EIPQVGSLLNQGPT-AFSGNPGLC 223
+ + N C
Sbjct: 536 SKGILQHFPKSLAFFNLTNNSVAC 559
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 93.9 bits (234), Expect = 3e-20
Identities = 26/155 (16%), Positives = 52/155 (33%), Gaps = 13/155 (8%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG 127
+ ++ L+ +P + +S + L+ N + N + L +LDL+
Sbjct: 14 ITYQCMDQKLS-KVPD--DIPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIET 70
Query: 128 PIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPV 187
L +L++L L+ N + P L +L L + + G
Sbjct: 71 IEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLE-NLVAVETKLASLESFPIGQLIT 129
Query: 188 MVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGL 222
+ L++ +N + P FS L
Sbjct: 130 LKKLNVAHNFIHSCKL---------PAYFSNLTNL 155
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 90.5 bits (225), Expect = 3e-19
Identities = 25/146 (17%), Positives = 43/146 (29%), Gaps = 2/146 (1%)
Query: 67 VTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFC 126
++ L L + L L L+ +L L L N
Sbjct: 34 TKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQ 93
Query: 127 GPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSG-QIPEMYGHF 185
P L +L +L L + L L LN++ N ++P + +
Sbjct: 94 SFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLK-KLNVAHNFIHSCKLPAYFSNL 152
Query: 186 PVMVSLDLRNNNLSGEIPQVGSLLNQ 211
+V +DL N + L +
Sbjct: 153 TNLVHVDLSYNYIQTITVNDLQFLRE 178
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 80.1 bits (198), Expect = 6e-16
Identities = 22/103 (21%), Positives = 39/103 (37%), Gaps = 3/103 (2%)
Query: 74 NRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNSFCGPIPDR 132
N + + +LT L L+ + I +F L L+++HN+
Sbjct: 458 NSFKDNTLSNVFANTTNLTFLDLSKCQLEQ-ISWGVFDTLHRLQLLNMSHNNLLFLDSSH 516
Query: 133 IKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFS 175
L +L+ LD S N + S ++L NL+ N +
Sbjct: 517 YNQLYSLSTLDCSFNRIETSKGILQHFPKSLA-FFNLTNNSVA 558
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 69.3 bits (170), Expect = 2e-12
Identities = 30/139 (21%), Positives = 53/139 (38%), Gaps = 8/139 (5%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSK-PIPANLFNATNLVYLDLAHNSFC 126
+L L +G L +L +L++A N +PA N TNLV++DL++N
Sbjct: 107 ENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQ 166
Query: 127 GPIPDRIKTLKNLT----HLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEM- 181
+ ++ L+ LD+S N ++ + + L L L N S I +
Sbjct: 167 TITVNDLQFLRENPQVNLSLDMSLNPID-FIQDQAFQGIKLH-ELTLRGNFNSSNIMKTC 224
Query: 182 YGHFPVMVSLDLRNNNLSG 200
+ + L
Sbjct: 225 LQNLAGLHVHRLILGEFKD 243
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 68.9 bits (169), Expect = 2e-12
Identities = 27/149 (18%), Positives = 44/149 (29%), Gaps = 10/149 (6%)
Query: 64 RNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHN 123
+ L N + L +++ +SLA + ++ L +
Sbjct: 260 DVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKYL--EDVPKHFKWQSLSIIRC 317
Query: 124 SFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYG 183
P L L L L+ N + S + L +L+ L+LS N S Y
Sbjct: 318 QLKQ-FPT--LDLPFLKSLTLTMNKGSISFK--KVALPSLS-YLDLSRNALSFSGCCSYS 371
Query: 184 HF--PVMVSLDLRNNNLSGEIPQVGSLLN 210
+ LDL N L
Sbjct: 372 DLGTNSLRHLDLSFNGAIIMSANFMGLEE 400
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 1e-10
Identities = 17/85 (20%), Positives = 31/85 (36%)
Query: 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSF 125
+T L L L L+ L L+++ NN ++ +L LD + N
Sbjct: 474 NLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRI 533
Query: 126 CGPIPDRIKTLKNLTHLDLSSNLLN 150
K+L +L++N +
Sbjct: 534 ETSKGILQHFPKSLAFFNLTNNSVA 558
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 59.3 bits (144), Expect = 2e-09
Identities = 23/136 (16%), Positives = 43/136 (31%), Gaps = 18/136 (13%)
Query: 74 NRNLTGYMPSELGLLNSLTRLSLASNNFS-----KPIPANLFN---ATNLVYLDLAHNSF 125
N N + M + L L L L F + ++ + L + +
Sbjct: 214 NFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTND 273
Query: 126 CGPIPDRIKTLKNLTHLDLSSNLLNGSLPE--FLLDLRALTGTLNLSFNQFSGQIPEMYG 183
+ L N++ + L+ + L + + +L++ Q Q P
Sbjct: 274 FSDDIVKFHCLANVSAMSLAGVSIK-YLEDVPKHFKWQ----SLSIIRCQLK-QFPT--L 325
Query: 184 HFPVMVSLDLRNNNLS 199
P + SL L N S
Sbjct: 326 DLPFLKSLTLTMNKGS 341
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 94.2 bits (235), Expect = 3e-21
Identities = 53/192 (27%), Positives = 85/192 (44%), Gaps = 52/192 (27%)
Query: 404 HPNIV-R-LKAFYYAN---DEKL--LISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNET 456
P I+ R +KA AN DE+ ++ DF GL +L+ +T
Sbjct: 152 DPKIIHRDVKA---ANILLDEEFEAVVGDF-------------GLAKLMDY------KDT 189
Query: 457 IVTS---GT-GSRISAISNVYLAPEARIYGS--KFTQKCDVYSFGIVLLEILTGRLP--- 507
VT+ GT G ++APE Y S K ++K DV+ +G++LLE++TG+
Sbjct: 190 HVTTAVRGTIG---------HIAPE---YLSTGKSSEKTDVFGYGVMLLELITGQRAFDL 237
Query: 508 DAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEF 567
+D L V+ +E++ L ++D L +V +AL CT+ P
Sbjct: 238 ARLANDDDVMLLDWVKGLLKEKK-LEALVDVDLQGNYK-DEEVEQLIQVALLCTQSSPME 295
Query: 568 RPRMRTVSESLD 579
RP+M V L+
Sbjct: 296 RPKMSEVVRMLE 307
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 76.1 bits (188), Expect = 3e-15
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 13/109 (11%)
Query: 335 FSLELEDLLRA-----SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRF 389
FSL +L A + ++G+ G +YK + G T+VAV+RL E
Sbjct: 20 FSLR--ELQVASDNFSNKNILGRGGFGKVYKGRLADG------TLVAVKRLKEERTQGGE 71
Query: 390 KDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHG 438
F++EVE I+ H N++RL+ F E+LL+ ++ NGS+ + L
Sbjct: 72 LQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE 120
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 94.7 bits (236), Expect = 1e-20
Identities = 32/156 (20%), Positives = 46/156 (29%), Gaps = 10/156 (6%)
Query: 50 SDSTPCHWSGIHCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANL 109
S C N+ N L +P L NS L + N
Sbjct: 3 SSDQKCI----EKEVNKT--YNCENLGLN-EIPG--TLPNSTECLEFSFNVLPTIQNTTF 53
Query: 110 FNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNL 169
NL +LDL D ++ L L L++N L L +AL L
Sbjct: 54 SRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALK-HLFF 112
Query: 170 SFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQV 205
S + + SL L +N++S
Sbjct: 113 IQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPK 148
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 93.5 bits (233), Expect = 3e-20
Identities = 27/139 (19%), Positives = 41/139 (29%), Gaps = 3/139 (2%)
Query: 67 VTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNSF 125
L L + L +LT L L I + F + L L L N
Sbjct: 35 TECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYW-IHEDTFQSQHRLDTLVLTANPL 93
Query: 126 CGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHF 185
+ K L HL ++ L + + L +L L N S
Sbjct: 94 IFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLE-SLYLGSNHISSIKLPKGFPT 152
Query: 186 PVMVSLDLRNNNLSGEIPQ 204
+ LD +NN + +
Sbjct: 153 EKLKVLDFQNNAIHYLSKE 171
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 91.6 bits (228), Expect = 1e-19
Identities = 36/136 (26%), Positives = 53/136 (38%), Gaps = 5/136 (3%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPI---PANLFNATNLVYLDLAHNS 124
L L + L L +L L+L N+F K +L L L L+
Sbjct: 428 KVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCD 487
Query: 125 FCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGH 184
+LK + H+DLS N L S E L L+ + LNL+ N S +P +
Sbjct: 488 LSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGIY--LNLASNHISIILPSLLPI 545
Query: 185 FPVMVSLDLRNNNLSG 200
+++LR N L
Sbjct: 546 LSQQRTINLRQNPLDC 561
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 91.6 bits (228), Expect = 1e-19
Identities = 36/158 (22%), Positives = 61/158 (38%), Gaps = 7/158 (4%)
Query: 68 TSLYLPNRNLTGYMP-SELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFC 126
L L L S L+ L L+L+ + L +L+L N F
Sbjct: 403 ELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFP 462
Query: 127 GPI---PDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYG 183
+ ++TL L L LS L+ L+ + ++LS N+ + E
Sbjct: 463 KGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMN-HVDLSHNRLTSSSIEALS 521
Query: 184 HFPVMVSLDLRNNNLSGEIPQVGSLLNQGPT-AFSGNP 220
H + L+L +N++S +P + +L+Q T NP
Sbjct: 522 HLKGIY-LNLASNHISIILPSLLPILSQQRTINLRQNP 558
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 90.5 bits (225), Expect = 3e-19
Identities = 29/149 (19%), Positives = 47/149 (31%), Gaps = 7/149 (4%)
Query: 61 HCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDL 120
V S+ L + + L L L + + S+ +P+ L + L L L
Sbjct: 250 GLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLSE-LPSGLVGLSTLKKLVL 308
Query: 121 AHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSL-PEFLLDLRALTGTLNLSFNQFSGQIP 179
+ N F +LTHL + N L L +L L L+LS +
Sbjct: 309 SANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLR-ELDLSHDDIE-TSD 366
Query: 180 EMYGHFPVMVSL---DLRNNNLSGEIPQV 205
+ L +L N +
Sbjct: 367 CCNLQLRNLSHLQSLNLSYNEPLSLKTEA 395
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 88.9 bits (221), Expect = 9e-19
Identities = 31/143 (21%), Positives = 54/143 (37%), Gaps = 5/143 (3%)
Query: 66 RVTSLYL-PNRNLTGYMPSELGLLNSLTRLSLASNNFSK--PIPANLFNATNLVYLDLAH 122
+T L + N L L +L L L+ ++ L N ++L L+L++
Sbjct: 326 SLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSY 385
Query: 123 NSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPE-FLLDLRALTGTLNLSFNQFSGQIPEM 181
N + K L LDL+ L + +L L LNLS + ++
Sbjct: 386 NEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLK-VLNLSHSLLDISSEQL 444
Query: 182 YGHFPVMVSLDLRNNNLSGEIPQ 204
+ P + L+L+ N+ Q
Sbjct: 445 FDGLPALQHLNLQGNHFPKGNIQ 467
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 87.8 bits (218), Expect = 2e-18
Identities = 30/162 (18%), Positives = 51/162 (31%), Gaps = 17/162 (10%)
Query: 66 RVTSLYLPNRNLTGYMPSELGL--LNSLTRLSLASNNFSKPIPANLFN---ATNLVYLDL 120
SL + L + SL + + I +F ++ ++L
Sbjct: 203 VFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDED-ISPAVFEGLCEMSVESINL 261
Query: 121 AHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPE 180
+ F + L LDL++ L+ LP L+ L L L LS N+F
Sbjct: 262 QKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLK-KLVLSANKFENLCQI 319
Query: 181 MYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGL 222
+FP + L ++ N E+ L
Sbjct: 320 SASNFPSLTHLSIKGNTKRLELG---------TGCLENLENL 352
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 85.8 bits (213), Expect = 8e-18
Identities = 30/144 (20%), Positives = 45/144 (31%), Gaps = 2/144 (1%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG 127
+L L L + L +L L S L N L L L N
Sbjct: 84 DTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISS 143
Query: 128 PIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTG-TLNLSFNQFSGQIPEMYGHFP 186
+ + L LD +N ++ E + L+ T +LNL+ N +G I
Sbjct: 144 IKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAG-IEPGAFDSA 202
Query: 187 VMVSLDLRNNNLSGEIPQVGSLLN 210
V SL+ I +
Sbjct: 203 VFQSLNFGGTQNLLVIFKGLKNST 226
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 72.0 bits (177), Expect = 2e-13
Identities = 23/176 (13%), Positives = 51/176 (28%), Gaps = 21/176 (11%)
Query: 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNL--VYLDLAHN 123
+ SLYL + +++ + L L +N ++ + + L+L N
Sbjct: 130 TLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGN 189
Query: 124 SFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFL--LDLRALTGTLNLSFNQFSGQIPEM 181
G I L+ + + L +++L P +
Sbjct: 190 DIAG-IEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLW-LGTFEDMDDEDISPAV 247
Query: 182 YGHFPVM--VSLDLRNNNLSGEIPQV-------------GSLLNQGPTAFSGNPGL 222
+ M S++L+ + + L++ P+ G L
Sbjct: 248 FEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLSELPSGLVGLSTL 303
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 63.5 bits (155), Expect = 1e-10
Identities = 21/134 (15%), Positives = 45/134 (33%), Gaps = 6/134 (4%)
Query: 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSF 125
R+ L L +L+ L + + L+ N + + +YL+LA N
Sbjct: 477 RLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTS-SSIEALSHLKGIYLNLASNHI 535
Query: 126 CGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHF 185
+P + L ++L N L+ + + + + +
Sbjct: 536 SIILPSLLPILSQQRTINLRQNPLDCT-----CSNIYFLEWYKENMQKLEDTEDTLCENP 590
Query: 186 PVMVSLDLRNNNLS 199
P++ + L + LS
Sbjct: 591 PLLRGVRLSDVTLS 604
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 94.9 bits (236), Expect = 2e-20
Identities = 31/208 (14%), Positives = 64/208 (30%), Gaps = 25/208 (12%)
Query: 24 QDGLALLALKAAI----------AQDPTRALDSWSESDSTPCHWSGIHCI----RNRVTS 69
+D AL A+ A+ + T +W+ + W + RVT
Sbjct: 269 KDYKALKAIWEALDGKNWRYYSGTINNTIHSLNWNFNKE-LDMWGDQPGVDLDNNGRVTG 327
Query: 70 LYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPA-NLFNATNLVYLDLAHNSFCGP 128
L L G +P +G L L LS +++ + T + + H
Sbjct: 328 LSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHY 387
Query: 129 IPDRIKTLKNLTHLDLSSNLLNGSL------PEFLLDLRALTGTLNLSFNQFSGQIPEMY 182
+ + L DL + +N + + + L+ + N+ + I +
Sbjct: 388 KKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSRISLKDTQ--IGNLTNRITF-ISKAI 444
Query: 183 GHFPVMVSLDLRNNNLSGEIPQVGSLLN 210
+ + N+ + + V
Sbjct: 445 QRLTKLQIIYFANSPFTYDNIAVDWEDA 472
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 93.0 bits (231), Expect = 7e-20
Identities = 20/164 (12%), Positives = 48/164 (29%), Gaps = 31/164 (18%)
Query: 76 NLTGYMPSELGLLNSLTRLSLASNNFS-------------------KPIPANLFNATNLV 116
N ++ + L L + A++ F+ + + N +L
Sbjct: 435 NRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLT 494
Query: 117 YLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNG---------SLPEFLLDLRALTGTL 167
++L + +PD + L L L+++ N L + +
Sbjct: 495 DVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQ-IF 553
Query: 168 NLSFNQFSGQIPEMY-GHFPVMVSLDLRNNNLSGEIPQVGSLLN 210
+ +N + LD +N + + G+ +
Sbjct: 554 YMGYNNLEEFPASASLQKMVKLGLLDCVHNKVR-HLEAFGTNVK 596
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 89.5 bits (222), Expect = 8e-19
Identities = 24/156 (15%), Positives = 55/156 (35%), Gaps = 20/156 (12%)
Query: 65 NRVTSLYLPNRNLTGYMPSELGL--LNSLTRLSLASNNFSK-----PIPANLFNATNLVY 117
++V L + L +P+ + + + + N + + N
Sbjct: 619 DQVEGLGFSHNKLKY-IPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINAST 677
Query: 118 LDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLL-------NGSLPEFLLDLRALTGTLNLS 170
+ L++N + T ++ + LS+NL+ + LT T++L
Sbjct: 678 VTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLT-TIDLR 736
Query: 171 FNQFSGQIPE--MYGHFPVMVSLDLRNNNLSGEIPQ 204
FN+ + + + P + ++D+ N S P
Sbjct: 737 FNKLTS-LSDDFRATTLPYLSNMDVSYNCFS-SFPT 770
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 89.2 bits (221), Expect = 1e-18
Identities = 30/173 (17%), Positives = 57/173 (32%), Gaps = 31/173 (17%)
Query: 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSF 125
+ + + + + T++ +N + I + T L + A++ F
Sbjct: 402 DLLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPF 460
Query: 126 CGP-------------------IPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGT 166
LK+LT ++L + LP+FL DL L +
Sbjct: 461 TYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQ-S 519
Query: 167 LNLSFNQFSG---------QIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLN 210
LN++ N+ ++ + P + + NNL E P SL
Sbjct: 520 LNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQK 571
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 88.8 bits (220), Expect = 2e-18
Identities = 24/153 (15%), Positives = 48/153 (31%), Gaps = 14/153 (9%)
Query: 68 TSLYLPNRNLTGYMPS-ELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFC 126
Y+ NL + S L + L L N + A L L L +N
Sbjct: 551 QIFYMGYNNLEEFPASASLQKMVKLGLLDCVHNKVRH-LEA-FGTNVKLTDLKLDYNQIE 608
Query: 127 GPIPDRI-KTLKNLTHLDLSSNLLNGSLPE--FLLDLRALTGTLNLSFNQFSGQIPEMYG 183
IP+ + L S N L +P + + +++ S+N+ + +
Sbjct: 609 E-IPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMG-SVDFSYNKIGSEGRNISC 665
Query: 184 HFPV-----MVSLDLRNNNLSGEIPQVGSLLNQ 211
++ L N + ++ + +
Sbjct: 666 SMDDYKGINASTVTLSYNEIQKFPTELFATGSP 698
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 79.9 bits (197), Expect = 8e-16
Identities = 27/141 (19%), Positives = 47/141 (33%), Gaps = 16/141 (11%)
Query: 68 TSLYLPNRNLTGYMPSELGL--LNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAH--- 122
T++ L LT + + L L+ + ++ N FS P N++ L + H
Sbjct: 731 TTIDLRFNKLTS-LSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRD 788
Query: 123 ---NSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLL-DLRALTGTLNLSFNQFSGQI 178
N P I T +L L + SN + + E L L L+++ N
Sbjct: 789 AEGNRILRQWPTGITTCPSLIQLQIGSNDIR-KVDEKLTPQLY----ILDIADNPNISID 843
Query: 179 PEMYGHFPVMVSLDLRNNNLS 199
+ L +
Sbjct: 844 VTSVCPYIEAGMYVLLYDKTQ 864
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 60.3 bits (146), Expect = 1e-09
Identities = 15/136 (11%), Positives = 38/136 (27%), Gaps = 2/136 (1%)
Query: 76 NLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKT 135
Y+ L L + + N ++ N + + + +
Sbjct: 263 ETAEYIKDYKALKAIWEALDGKNWRYYSGTINNTIHSLNW-NFNKELDMWGDQPGVDLDN 321
Query: 136 LKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRN 195
+T L L+ G +P+ + L L L+ + + + R
Sbjct: 322 NGRVTGLSLAGFGAKGRVPDAIGQLTELK-VLSFGTHSETVSGRLFGDEELTPDMSEERK 380
Query: 196 NNLSGEIPQVGSLLNQ 211
+ + ++ +Q
Sbjct: 381 HRIRMHYKKMFLDYDQ 396
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 90.8 bits (226), Expect = 2e-20
Identities = 53/265 (20%), Positives = 91/265 (34%), Gaps = 80/265 (30%)
Query: 373 TVVAVRRL------TEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426
+VVA++ L E + +F++F+ EV ++ + HPNIV+L ++ ++ +F
Sbjct: 45 SVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGL--MHNPPRMVMEF 102
Query: 427 IRNGSLYAALHG------------------FGLNRL------------------------ 444
+ G LY L G+ +
Sbjct: 103 VPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDE 162
Query: 445 -LPGTSKVT------KNETIVTSGTGSRISAISNVYLAPEA-RIYGSKFTQKCDVYSFGI 496
P +KV ++ V+ G + ++APE +T+K D YSF +
Sbjct: 163 NAPVCAKVADFGLSQQSVHSVSGLLG------NFQWMAPETIGAEEESYTEKADTYSFAM 216
Query: 497 VLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP-LSEVIDPALVKEIHAKRQVLATFH 555
+L ILTG P +++ RP + E P L I
Sbjct: 217 ILYTILTGEGPFDEYSYGKIKFINMI--REEGLRPTIPEDCPPRLRNVIEL--------- 265
Query: 556 IALNCTELDPEFRPRMRTVSESLDR 580
C DP+ RP + + L
Sbjct: 266 ----CWSGDPKKRPHFSYIVKELSE 286
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 91.3 bits (227), Expect = 3e-20
Identities = 39/266 (14%), Positives = 77/266 (28%), Gaps = 80/266 (30%)
Query: 375 VAVRRLTEGDAT-WRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLY 433
VA+R + + K F+ EV A + +H N+V + +I+ + +LY
Sbjct: 58 VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLY 117
Query: 434 AALHG----FGLNRLLP---------------------------------------GTSK 450
+ + +N+ G
Sbjct: 118 SVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDNGKVVITDFGLFS 177
Query: 451 VTKNETIVTSGTGSRISAISNVYLAPE--------ARIYGSKFTQKCDVYSFGIVLLEIL 502
++ RI +LAPE F++ DV++ G + E+
Sbjct: 178 ISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELH 237
Query: 503 TGRLPDAGPEND------GKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHI 556
P + G G+ + LS++ + + I
Sbjct: 238 AREWPFKTQPAEAIIWQMGTGM----------KPNLSQIGMGKEISD------------I 275
Query: 557 ALNCTELDPEFRPRMRTVSESLDRVK 582
L C + E RP + + L+++
Sbjct: 276 LLFCWAFEQEERPTFTKLMDMLEKLP 301
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 86.5 bits (215), Expect = 1e-18
Identities = 33/157 (21%), Positives = 57/157 (36%), Gaps = 12/157 (7%)
Query: 62 CIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLA 121
+ +L L + L P + L+ L +++ + + +P + L L LA
Sbjct: 78 ATQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLME-LPDTMQQFAGLETLTLA 135
Query: 122 HNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTG--------TLNLSFNQ 173
N +P I +L L L + + LPE L A +L L +
Sbjct: 136 RNPLRA-LPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTG 194
Query: 174 FSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLN 210
+P + + SL +RN+ LS P + L
Sbjct: 195 IR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPK 230
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 80.4 bits (199), Expect = 1e-16
Identities = 28/153 (18%), Positives = 50/153 (32%), Gaps = 10/153 (6%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG 127
SL L + +P+ + L +L L + ++ S + + + L LDL +
Sbjct: 186 QSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALR 243
Query: 128 PIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPV 187
P L L L +LP + L L L+L ++P + P
Sbjct: 244 NYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLE-KLDLRGCVNLSRLPSLIAQLPA 302
Query: 188 MVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNP 220
+ + + + L P A P
Sbjct: 303 NCIILVPPHLQA-------QLDQHRPVARPAEP 328
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 58.4 bits (142), Expect = 2e-09
Identities = 22/145 (15%), Positives = 38/145 (26%), Gaps = 26/145 (17%)
Query: 88 LNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPI------------------ 129
+ L + +P L D
Sbjct: 11 SSGRENLYFQGSTALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKA 70
Query: 130 -PDRIK--TLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFP 186
D ++ T L+L S L P+ L L + + ++P+ F
Sbjct: 71 TADLLEDATQPGRVALELRSVPLP-QFPDQAFRLSHLQ-HMTIDAAGLM-ELPDTMQQFA 127
Query: 187 VMVSLDLRNNNLSGEIPQ-VGSLLN 210
+ +L L N L +P + SL
Sbjct: 128 GLETLTLARNPLR-ALPASIASLNR 151
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 83.8 bits (208), Expect = 3e-18
Identities = 50/257 (19%), Positives = 90/257 (35%), Gaps = 64/257 (24%)
Query: 373 TVVAVRRLTEGDATWR-FKDFESEVEAIARVQHPNIVRLKAFYYANDEKLL--ISDFIRN 429
+ V+ L D + R +DF E + HPN++ + + I+ ++
Sbjct: 34 NDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPY 93
Query: 430 GSLYAALHGFGLNRLLPGTSKV--------------TKNETIV----TS----------- 460
GSLY LH G N ++ + V T I S
Sbjct: 94 GSLYNVLHE-GTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTA 152
Query: 461 -----GTGSRISAISNVY----LAPEARIYGSK---FTQKCDVYSFGIVLLEILTGRLPD 508
+ +Y +APEA + + D++SF ++L E++T +P
Sbjct: 153 RISMADVKFSFQSPGRMYAPAWVAPEA-LQKKPEDTNRRSADMWSFAVLLWELVTREVPF 211
Query: 509 AGPENDGKGLESLVRKAFRERRP-LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEF 567
A N +E ++ A RP + I P + K + C DP
Sbjct: 212 ADLSN----MEIGMKVALEGLRPTIPPGISPHVSKLMKI-------------CMNEDPAK 254
Query: 568 RPRMRTVSESLDRVKLQ 584
RP+ + L++++ +
Sbjct: 255 RPKFDMIVPILEKMQDK 271
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 84.8 bits (210), Expect = 2e-17
Identities = 32/134 (23%), Positives = 53/134 (39%), Gaps = 4/134 (2%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNSFC 126
L L + M S L L L +N + ++F + NL+YLD++H
Sbjct: 376 KYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTR 434
Query: 127 GPIPDRIKTLKNLTHLDLSSNLLNGSL-PEFLLDLRALTGTLNLSFNQFSGQIPEMYGHF 185
L +L L ++ N + P+ +LR LT L+LS Q P +
Sbjct: 435 VAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLT-FLDLSQCQLEQLSPTAFNSL 493
Query: 186 PVMVSLDLRNNNLS 199
+ L++ +N L
Sbjct: 494 SSLQVLNMASNQLK 507
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 84.0 bits (208), Expect = 3e-17
Identities = 29/147 (19%), Positives = 49/147 (33%), Gaps = 4/147 (2%)
Query: 67 VTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNSF 125
+L L L L L L+ I + + ++L L L N
Sbjct: 30 TKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQT-IEDGAYQSLSHLSTLILTGNPI 88
Query: 126 CGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQF-SGQIPEMYGH 184
L +L L L + L+ L LN++ N S ++PE + +
Sbjct: 89 QSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLK-ELNVAHNLIQSFKLPEYFSN 147
Query: 185 FPVMVSLDLRNNNLSGEIPQVGSLLNQ 211
+ LDL +N + +L+Q
Sbjct: 148 LTNLEHLDLSSNKIQSIYCTDLRVLHQ 174
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 80.9 bits (200), Expect = 3e-16
Identities = 26/146 (17%), Positives = 46/146 (31%), Gaps = 10/146 (6%)
Query: 54 PCHWSGIHCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNAT 113
PC + + N +P L S L L+ N + F+
Sbjct: 2 PCV-----EVVPN-ITYQCMELNFY-KIPD--NLPFSTKNLDLSFNPLRHLGSYSFFSFP 52
Query: 114 NLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQ 173
L LDL+ ++L +L+ L L+ N + L +L L
Sbjct: 53 ELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQ-KLVAVETN 111
Query: 174 FSGQIPEMYGHFPVMVSLDLRNNNLS 199
+ GH + L++ +N +
Sbjct: 112 LASLENFPIGHLKTLKELNVAHNLIQ 137
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 76.7 bits (189), Expect = 6e-15
Identities = 31/125 (24%), Positives = 49/125 (39%), Gaps = 4/125 (3%)
Query: 88 LNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNSFCGPIPDRI-KTLKNLTHLDLS 145
L +L L ++ + +F ++L L +A NSF I L+NLT LDLS
Sbjct: 420 LRNLIYLDISHTHTRV-AFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLS 478
Query: 146 SNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQV 205
L P L +L LN++ NQ ++ + + L N P++
Sbjct: 479 QCQLEQLSPTAFNSLSSLQ-VLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 537
Query: 206 GSLLN 210
L
Sbjct: 538 DYLSR 542
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 76.3 bits (188), Expect = 1e-14
Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 4/110 (3%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNA-TNLVYLDLAHNSFC 126
L + + + L+SL L +A N+F + ++F NL +LDL+
Sbjct: 424 IYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLE 483
Query: 127 GPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLD-LRALTGTLNLSFNQFS 175
P +L +L L+++SN L S+P+ + D L +L + L N +
Sbjct: 484 QLSPTAFNSLSSLQVLNMASNQLK-SVPDGIFDRLTSLQ-KIWLHTNPWD 531
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 68.2 bits (167), Expect = 3e-12
Identities = 33/137 (24%), Positives = 50/137 (36%), Gaps = 9/137 (6%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNF-SKPIPANLFNATNLVYLDLAHNSFC 126
L NL +G L +L L++A N S +P N TNL +LDL+ N
Sbjct: 103 QKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ 162
Query: 127 GPIPDRIKTLKNLT----HLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMY 182
++ L + LDLS N +N + L L L N S + +
Sbjct: 163 SIYCTDLRVLHQMPLLNLSLDLSLNPMN-FIQPGAFKEIRLH-KLTLRNNFDSLNVMK-- 218
Query: 183 GHFPVMVSLDLRNNNLS 199
+ L++ L
Sbjct: 219 TCIQGLAGLEVHRLVLG 235
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 66.7 bits (163), Expect = 1e-11
Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 9/116 (7%)
Query: 88 LNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHN--SFCGPIPDRIKTLKNLTHLDLS 145
L SL RL+ SN + +L +LDL+ N SF G +L +LDLS
Sbjct: 324 LKSLKRLTFTSNKGGNAFS--EVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLS 381
Query: 146 SNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMY--GHFPVMVSLDLRNNNLS 199
N + ++ L L L L+ + Q+ E ++ LD+ + +
Sbjct: 382 FNGVI-TMSSNFLGLEQLE-HLDFQHSNLK-QMSEFSVFLSLRNLIYLDISHTHTR 434
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 2e-10
Identities = 28/170 (16%), Positives = 54/170 (31%), Gaps = 13/170 (7%)
Query: 68 TSLYLPNRNLT-GYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNL----VYLDLAH 122
L + + + +P L +L L L+SN +L + + LDL+
Sbjct: 127 KELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 186
Query: 123 NSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQ---IP 179
N I L L L +N + ++ + + A L +F +
Sbjct: 187 NPMNF-IQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEK 245
Query: 180 EMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGLCGFPLQS 229
+ +L + L+ + L+ F+ + F L S
Sbjct: 246 FDKSALEGLCNLTIEEFRLA----YLDYYLDDIIDLFNCLTNVSSFSLVS 291
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 1e-05
Identities = 33/157 (21%), Positives = 50/157 (31%), Gaps = 19/157 (12%)
Query: 69 SLYLPNRNLTGYMPSELGLLNSLT--RLSLASNNFSKPIPANLFNA-TNLVYLDLAHNSF 125
+ NL + S L L +LT LA ++ +LFN TN+ L +
Sbjct: 235 GEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTI 294
Query: 126 CGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHF 185
+ D HL+L + L L+ L + N+ E+
Sbjct: 295 -ERVKDFSY-NFGWQHLELVNCKFGQFPTLKLKSLK----RLTFTSNKGGNAFSEV--DL 346
Query: 186 PVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGL 222
P + LDL N L S + G L
Sbjct: 347 PSLEFLDLSRNGL--------SFKGCCSQSDFGTTSL 375
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 4e-05
Identities = 26/168 (15%), Positives = 45/168 (26%), Gaps = 34/168 (20%)
Query: 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLA---SNNFSKPIPANLFNATNLVYLDLA 121
+ L L + + ++L +L+ + L+L+ S N I F L L L
Sbjct: 149 TNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLR 208
Query: 122 HNSFCGPIPDR-IKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTG-----TLNLSFNQFS 175
+N + I+ L L L D AL G
Sbjct: 209 NNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLD 268
Query: 176 GQIPEMYGHFPVMVS-------------------------LDLRNNNL 198
+ ++ F + + L+L N
Sbjct: 269 YYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKF 316
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 79.2 bits (196), Expect = 3e-17
Identities = 33/134 (24%), Positives = 58/134 (43%), Gaps = 6/134 (4%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG 127
L + N + T Y + + L++L RL + + + NL T+L LD++H++
Sbjct: 69 KDLTINNIHATNY--NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDD 126
Query: 128 PIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPV 187
I +I TL + +DLS N + L L L +LN+ F+ FP
Sbjct: 127 SILTKINTLPKVNSIDLSYNGAITDI-MPLKTLPELK-SLNIQFDGVHDYRG--IEDFPK 182
Query: 188 MVSLDLRNNNLSGE 201
+ L + + G+
Sbjct: 183 LNQLYAFSQTIGGK 196
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 68.4 bits (168), Expect = 2e-13
Identities = 30/123 (24%), Positives = 51/123 (41%), Gaps = 5/123 (4%)
Query: 88 LNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSN 147
+NSLT ++LA+ N + + + A N+ L + + P I L NL L +
Sbjct: 43 MNSLTYITLANINVTD-LT-GIEYAHNIKDLTINNIHATNYNP--ISGLSNLERLRIMGK 98
Query: 148 LLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGS 207
+ L L +LT L++S + I P + S+DL N +I + +
Sbjct: 99 DVTSDKIPNLSGLTSLT-LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIMPLKT 157
Query: 208 LLN 210
L
Sbjct: 158 LPE 160
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 83.4 bits (206), Expect = 3e-17
Identities = 29/135 (21%), Positives = 57/135 (42%), Gaps = 11/135 (8%)
Query: 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNS 124
NR + + +L + S ++ L L+ N S+ A+L T L L+L+ N
Sbjct: 10 NRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNV 69
Query: 125 FCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGH 184
+ +++L L LDL++N + L ++ TL+ + N S ++
Sbjct: 70 LYETLD--LESLSTLRTLDLNNNYVQ-ELLV----GPSIE-TLHAANNNIS-RVSC--SR 118
Query: 185 FPVMVSLDLRNNNLS 199
++ L NN ++
Sbjct: 119 GQGKKNIYLANNKIT 133
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 78.0 bits (192), Expect = 2e-15
Identities = 28/139 (20%), Positives = 53/139 (38%), Gaps = 9/139 (6%)
Query: 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSF 125
+ +L+ N N++ + LA+N + + + + YLDL N
Sbjct: 100 SIETLHAANNNISRV---SCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEI 156
Query: 126 CG-PIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGH 184
+ + L HL+L N + + ++ L TL+LS N+ + + +
Sbjct: 157 DTVNFAELAASSDTLEHLNLQYNFIY-DVKGQVV-FAKLK-TLDLSSNKLA-FMGPEFQS 212
Query: 185 FPVMVSLDLRNNNLSGEIP 203
+ + LRNN L I
Sbjct: 213 AAGVTWISLRNNKLV-LIE 230
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 75.7 bits (186), Expect = 1e-14
Identities = 26/118 (22%), Positives = 47/118 (39%), Gaps = 9/118 (7%)
Query: 86 GLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLS 145
N + ++ + + + +A N+ LDL+ N + L L+LS
Sbjct: 7 QNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLS 66
Query: 146 SNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIP 203
SN+L + L L TL+L+ N ++ P + +L NNN+S +
Sbjct: 67 SNVLY-ETLDL-ESLSTLR-TLDLNNNYVQ-ELLVG----PSIETLHAANNNIS-RVS 115
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 67.2 bits (164), Expect = 5e-12
Identities = 21/133 (15%), Positives = 45/133 (33%), Gaps = 8/133 (6%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG 127
L L + + ++ + L L L+SN + + +A + ++ L +N
Sbjct: 172 EHLNLQYNFIYD-VKGQV-VFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL 228
Query: 128 PIPDRIKTLKNLTHLDLSSNLLN-GSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFP 186
I ++ +NL H DL N + G+L +F + + ++ +
Sbjct: 229 -IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRV---QTVAKQTVKKLTGQNEEECT 284
Query: 187 VMVSLDLRNNNLS 199
V
Sbjct: 285 VPTLGHYGAYCCE 297
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 61.4 bits (149), Expect = 3e-10
Identities = 23/151 (15%), Positives = 38/151 (25%), Gaps = 7/151 (4%)
Query: 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNS 124
VT + L N L + L +L L N F + F + N +A +
Sbjct: 214 AGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFF-SKNQRVQTVAKQT 271
Query: 125 FCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALT----GTLNLSFNQFSGQIPE 180
+ T + F L AL L+ ++ +
Sbjct: 272 VKKLTGQNEEECTVPTLGHYGAYCCEDLPAPFADRLIALKRKEHALLSGQGSETER-LEC 330
Query: 181 MYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQ 211
+ +D I QV
Sbjct: 331 ERENQARQREIDALKEQYRTVIDQVTLRKQA 361
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 56.0 bits (135), Expect = 2e-08
Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 2/82 (2%)
Query: 129 IPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVM 188
I + + ++ + L +L + L+LS N S F +
Sbjct: 2 IHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVK-ELDLSGNPLSQISAADLAPFTKL 60
Query: 189 VSLDLRNNNLSGEIPQVGSLLN 210
L+L +N L E + SL
Sbjct: 61 ELLNLSSNVLY-ETLDLESLST 81
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 42.5 bits (100), Expect = 3e-04
Identities = 18/143 (12%), Positives = 37/143 (25%), Gaps = 8/143 (5%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASN-------NFSKPIPANLFNATNLVYLDL 120
T L + + L L + + ++ + N +D
Sbjct: 284 TVPTLGHYGAYCCEDLPAPFADRLIALKRKEHALLSGQGSETERLECERENQARQREIDA 343
Query: 121 AHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQ-IP 179
+ I + L+ L+ + L GTL + Q Q
Sbjct: 344 LKEQYRTVIDQVTLRKQAKITLEQKKKALDEQVSNGRRAHAELDGTLQQAVGQIELQHAT 403
Query: 180 EMYGHFPVMVSLDLRNNNLSGEI 202
E ++ ++ R + E
Sbjct: 404 EEQSPLQLLRAIVKRYEEMYVEQ 426
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 81.6 bits (202), Expect = 4e-17
Identities = 30/145 (20%), Positives = 52/145 (35%), Gaps = 6/145 (4%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSK-PIPANLFNATNLVYLDLAHNSFC 126
++YL N +T + G + + L L N ++ L +L+L +N
Sbjct: 123 KNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY 182
Query: 127 GPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFP 186
+ ++ L LDLSSN L + +T ++L N+ I +
Sbjct: 183 D-VKGQVV-FAKLKTLDLSSNKLA-FMGPEFQSAAGVT-WISLRNNKLV-LIEKALRFSQ 237
Query: 187 VMVSLDLRNNNLSGEIPQVGSLLNQ 211
+ DLR N + NQ
Sbjct: 238 NLEHFDLRGNGFHCGTLRDFFSKNQ 262
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 80.8 bits (200), Expect = 7e-17
Identities = 30/159 (18%), Positives = 58/159 (36%), Gaps = 23/159 (14%)
Query: 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNA-TNLVYLDLAHN 123
NR + + +L + S ++ L L+ N S+ I A T L L+L+ N
Sbjct: 10 NRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQ-ISAADLAPFTKLELLNLSSN 68
Query: 124 SFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYG 183
D +++L L LDL++N + L ++ TL+ + N S ++
Sbjct: 69 VLYE-TLD-LESLSTLRTLDLNNNYVQ-ELLV----GPSIE-TLHAANNNIS-RVSC--S 117
Query: 184 HFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGL 222
++ L NN ++ + +
Sbjct: 118 RGQGKKNIYLANNKIT-MLR---------DLDEGCRSRV 146
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 77.7 bits (192), Expect = 8e-16
Identities = 28/139 (20%), Positives = 52/139 (37%), Gaps = 9/139 (6%)
Query: 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSF 125
+ +L+ N N++ + LA+N + + + + YLDL N
Sbjct: 100 SIETLHAANNNISR---VSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEI 156
Query: 126 CG-PIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGH 184
+ + L HL+L N + + + L TL+LS N+ + + +
Sbjct: 157 DTVNFAELAASSDTLEHLNLQYNFIY-DVKG-QVVFAKLK-TLDLSSNKLA-FMGPEFQS 212
Query: 185 FPVMVSLDLRNNNLSGEIP 203
+ + LRNN L I
Sbjct: 213 AAGVTWISLRNNKLV-LIE 230
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 76.6 bits (189), Expect = 2e-15
Identities = 26/116 (22%), Positives = 47/116 (40%), Gaps = 9/116 (7%)
Query: 88 LNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSN 147
N + ++ + + + +A N+ LDL+ N + L L+LSSN
Sbjct: 9 GNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSN 68
Query: 148 LLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIP 203
+L + L L TL+L+ N ++ P + +L NNN+S +
Sbjct: 69 VLY-ETLDL-ESLSTLR-TLDLNNNYVQ-ELLVG----PSIETLHAANNNIS-RVS 115
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 1e-12
Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 4/98 (4%)
Query: 111 NATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLS 170
N + +S + ++ N+ LDLS N L+ L L LNLS
Sbjct: 8 NGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLE-LLNLS 66
Query: 171 FNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSL 208
N + ++ + +LDL NN + E+ S+
Sbjct: 67 SNVLY-ETLDL-ESLSTLRTLDLNNNYVQ-ELLVGPSI 101
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 66.9 bits (164), Expect = 3e-12
Identities = 22/137 (16%), Positives = 50/137 (36%), Gaps = 9/137 (6%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG 127
L L + + ++ L L L+SN + + +A + ++ L +N
Sbjct: 172 EHLNLQYNFIYD-VKGQVVFAK-LKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKL-V 227
Query: 128 PIPDRIKTLKNLTHLDLSSNLLN-GSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFP 186
I ++ +NL H DL N + G+L +F + + ++ ++
Sbjct: 228 LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQ---TVAKQTVK-KLTGQNEEEC 283
Query: 187 VMVSLDLRNNNLSGEIP 203
+ +L ++P
Sbjct: 284 TVPTLGHYGAYCCEDLP 300
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 4e-09
Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 2/82 (2%)
Query: 129 IPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVM 188
I + + ++ + L +L + L+LS N S F +
Sbjct: 2 IHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVK-ELDLSGNPLSQISAADLAPFTKL 60
Query: 189 VSLDLRNNNLSGEIPQVGSLLN 210
L+L +N L E + SL
Sbjct: 61 ELLNLSSNVLY-ETLDLESLST 81
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 2e-07
Identities = 25/120 (20%), Positives = 40/120 (33%), Gaps = 25/120 (20%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSF-C 126
+L L + L +M E +T +SL +N I L + NL + DL N F C
Sbjct: 194 KTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHC 251
Query: 127 GPIPDRIKTLKNLTHLDLSSN-------LLNGSLPE---------------FLLDLRALT 164
G + D + + + + ++P F L AL
Sbjct: 252 GTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVPTLGHYGAYCCEDLPAPFADRLIALG 311
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 81.8 bits (203), Expect = 5e-17
Identities = 29/136 (21%), Positives = 55/136 (40%), Gaps = 9/136 (6%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG 127
+T + + + L L + +N + P L N + L +L++ N
Sbjct: 202 HYFTAYVNQITD--ITPVANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISD 257
Query: 128 PIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPV 187
+K L L L++ SN ++ L +L L +L L+ NQ + E+ G
Sbjct: 258 INA--VKDLTKLKMLNVGSNQISD--ISVLNNLSQLN-SLFLNNNQLGNEDMEVIGGLTN 312
Query: 188 MVSLDLRNNNLSGEIP 203
+ +L L N+++ P
Sbjct: 313 LTTLFLSQNHITDIRP 328
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 81.0 bits (201), Expect = 9e-17
Identities = 33/143 (23%), Positives = 56/143 (39%), Gaps = 11/143 (7%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG 127
L L +T S L L LT L + +N + L N TNL L L ++
Sbjct: 69 EYLNLNGNQITD--ISPLSNLVKLTNLYIGTNKITDISA--LQNLTNLRELYLNEDNISD 124
Query: 128 PIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPV 187
P + L + L+L +N S L ++ L L ++ ++ + + +
Sbjct: 125 ISP--LANLTKMYSLNLGANHN-LSDLSPLSNMTGLN-YLTVTESKVKD-VTPI-ANLTD 178
Query: 188 MVSLDLRNNNLSGEIPQVGSLLN 210
+ SL L N + I + SL +
Sbjct: 179 LYSLSLNYNQIED-ISPLASLTS 200
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 79.1 bits (196), Expect = 4e-16
Identities = 36/132 (27%), Positives = 52/132 (39%), Gaps = 9/132 (6%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG 127
SL + N +T S L L+ LT L + +N S + + T L L++ N
Sbjct: 224 NSLKIGNNKITD--LSPLANLSQLTWLEIGTNQISDINA--VKDLTKLKMLNVGSNQISD 279
Query: 128 PIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPV 187
+ L L L L++N L E + L LT TL LS N + I +
Sbjct: 280 ISV--LNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLT-TLFLSQNHITD-IRPL-ASLSK 334
Query: 188 MVSLDLRNNNLS 199
M S D N +
Sbjct: 335 MDSADFANQVIK 346
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 74.1 bits (183), Expect = 2e-14
Identities = 29/143 (20%), Positives = 54/143 (37%), Gaps = 11/143 (7%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG 127
SL L + S L + L L++ + P + N T+L L L +N
Sbjct: 135 YSLNLGANHNLS-DLSPLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIED 191
Query: 128 PIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPV 187
P + +L +L + N + P + ++ L +L + N+ + P +
Sbjct: 192 ISP--LASLTSLHYFTAYVNQITDITP--VANMTRLN-SLKIGNNKITDLSP--LANLSQ 244
Query: 188 MVSLDLRNNNLSGEIPQVGSLLN 210
+ L++ N +S I V L
Sbjct: 245 LTWLEIGTNQISD-INAVKDLTK 266
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 69.5 bits (171), Expect = 5e-13
Identities = 28/143 (19%), Positives = 51/143 (35%), Gaps = 12/143 (8%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG 127
+L + P L R L + + + ++ L +A
Sbjct: 3 ATLATLPAPINQIFP--DADLAEGIRAVLQKASVTDVVT--QEELESITKLVVAGEKV-A 57
Query: 128 PIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPV 187
I I+ L NL +L+L+ N + P L +L LT L + N+ + +
Sbjct: 58 SIQG-IEYLTNLEYLNLNGNQITDISP--LSNLVKLT-NLYIGTNKIT--DISALQNLTN 111
Query: 188 MVSLDLRNNNLSGEIPQVGSLLN 210
+ L L +N+S I + +L
Sbjct: 112 LRELYLNEDNISD-ISPLANLTK 133
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 83.7 bits (207), Expect = 6e-17
Identities = 36/137 (26%), Positives = 53/137 (38%), Gaps = 5/137 (3%)
Query: 67 VTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNSF 125
L L + S L L L L S I F N NL LDL +
Sbjct: 26 TERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKI 85
Query: 126 CGPIPDRIKTLKNLTHLDLSSNLLNGSL--PEFLLDLRALTGTLNLSFNQFSG-QIPEMY 182
PD + L +L L L L+ ++ + +L+ALT L+LS NQ + +
Sbjct: 86 YFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALT-RLDLSKNQIRSLYLHPSF 144
Query: 183 GHFPVMVSLDLRNNNLS 199
G + S+D +N +
Sbjct: 145 GKLNSLKSIDFSSNQIF 161
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 75.2 bits (185), Expect = 3e-14
Identities = 36/153 (23%), Positives = 53/153 (34%), Gaps = 19/153 (12%)
Query: 74 NRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNSFCGPIPDR 132
NLT +P +LN+ RL L+ N + A+ F L L+L I
Sbjct: 13 FCNLT-QVPQ---VLNTTERLLLSFNYIRT-VTASSFPFLEQLQLLELGSQYTPLTIDKE 67
Query: 133 I-KTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQI--PEMYGHFPVMV 189
+ L NL LDL S+ + P+ L L L L F S + + + +
Sbjct: 68 AFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLF-ELRLYFCGLSDAVLKDGYFRNLKALT 126
Query: 190 SLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGL 222
LDL N + +F L
Sbjct: 127 RLDLSKNQIRSLYL---------HPSFGKLNSL 150
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 71.0 bits (174), Expect = 6e-13
Identities = 32/137 (23%), Positives = 49/137 (35%), Gaps = 8/137 (5%)
Query: 64 RNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAH 122
R+ V L L + + L L L+LA N +K I F NL L+L++
Sbjct: 265 RSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINK-IADEAFYGLDNLQVLNLSY 323
Query: 123 NSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMY 182
N L + ++DL N + + L L TL+L N +
Sbjct: 324 NLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQ-TLDLRDNALT-----TI 377
Query: 183 GHFPVMVSLDLRNNNLS 199
P + + L N L
Sbjct: 378 HFIPSIPDIFLSGNKLV 394
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 70.6 bits (173), Expect = 7e-13
Identities = 47/254 (18%), Positives = 77/254 (30%), Gaps = 23/254 (9%)
Query: 68 TSLYLPNRNLTGYMPSEL-GLLNSLTRLSLASNNFSKP----IPANLF-NATNLVYLDLA 121
L L + + SL +L L N + ++F ++L L L
Sbjct: 429 QILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLN 488
Query: 122 HNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEM 181
HN P L L L L+SN L L L L L++S NQ P+
Sbjct: 489 HNYLNSLPPGVFSHLTALRGLSLNSNRLT-VLSHNDL-PANLE-ILDISRNQLLAPNPD- 544
Query: 182 YGHFPVMVSLDLRNNNLSGEIPQVG--SLLNQGPTAFSGNPGLCGFPLQSPCPEPENPKV 239
F + LD+ +N E + LN +G P P
Sbjct: 545 --VFVSLSVLDITHNKFICECELSTFINWLNHTNVTIAGPPADI--YCVYPDSFSGVSLF 600
Query: 240 HANPEVEDGPQNPKNTNFGYSGDVKDRGRNGSVVVSVISGVSVVVGVVSVSVWLFRRKRR 299
+ E D + K+ F +V +++ + V ++ + +
Sbjct: 601 SLSTEGCDEEEVLKSLKFSLFIVC-------TVTLTLFLMTILTVTKFRGFCFICYKTAQ 653
Query: 300 AREGKMGKEEKTND 313
K + D
Sbjct: 654 RLVFKDHPQGTEPD 667
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 68.3 bits (167), Expect = 4e-12
Identities = 34/173 (19%), Positives = 54/173 (31%), Gaps = 12/173 (6%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSK-PIPANLF-NATNLVYLDLAHNSF 125
L L + + P L L L L S + F N L LDL+ N
Sbjct: 76 RILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQI 135
Query: 126 -CGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALT-GTLNLSFNQFSGQIPEMYG 183
+ L +L +D SSN + L L+ T +L+ N ++ +G
Sbjct: 136 RSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWG 195
Query: 184 HFP------VMVSLDLRNNNLSGEIPQVGSLLNQG--PTAFSGNPGLCGFPLQ 228
V+ LD+ N + +I S + + G
Sbjct: 196 KCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFG 248
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 66.0 bits (161), Expect = 2e-11
Identities = 33/150 (22%), Positives = 52/150 (34%), Gaps = 17/150 (11%)
Query: 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNS 124
+ L L + L++L L+L+ N + + ++ F + Y+DL N
Sbjct: 291 DLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGE-LYSSNFYGLPKVAYIDLQKNH 349
Query: 125 FCGPIPDRIKTLKNLTHLDLSSNLLN-----GSLPEFLLDLRALTG---------TLNLS 170
K L+ L LDL N L S+P+ L L ++LS
Sbjct: 350 IAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLS 409
Query: 171 FNQFSG-QIPEMYGHFPVMVSLDLRNNNLS 199
N+ I P + L L N S
Sbjct: 410 ENRLENLDILYFLLRVPHLQILILNQNRFS 439
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 55.2 bits (133), Expect = 4e-08
Identities = 25/154 (16%), Positives = 50/154 (32%), Gaps = 22/154 (14%)
Query: 68 TSLYLPNRNLTGYM--PSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNS 124
L L L+ + L +LTRL L+ N F +L +D + N
Sbjct: 100 FELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQ 159
Query: 125 FCGPIPDRIKTL--KNLTHLDLSSNLLNGSLPE-FLLDLRALTG----TLNLSFNQFSGQ 177
++ L K L+ L++N L + + + L++S N ++
Sbjct: 160 IFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVD 219
Query: 178 IPEMYGHF------------PVMVSLDLRNNNLS 199
I + + ++ +N+
Sbjct: 220 ITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIK 253
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 47.1 bits (112), Expect = 1e-05
Identities = 35/165 (21%), Positives = 57/165 (34%), Gaps = 9/165 (5%)
Query: 48 SESDSTPCHWSGIHCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPA 107
+ T W + + + LYL + L P L +L LSL SN + +
Sbjct: 464 QLAWETELCWDVFEGLSH-LQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTV-LSH 521
Query: 108 NLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGS--LPEFLLDLRALTG 165
N NL LD++ N P PD +L+ LD++ N L F+ L
Sbjct: 522 NDL-PANLEILDISRNQLLAPNPD---VFVSLSVLDITHNKFICECELSTFINWLNHTNV 577
Query: 166 TLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLN 210
T+ P+ + + SL + + + L
Sbjct: 578 TIAGPPADIYCVYPDSFSGVSLF-SLSTEGCDEEEVLKSLKFSLF 621
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 79.9 bits (197), Expect = 1e-16
Identities = 32/157 (20%), Positives = 50/157 (31%), Gaps = 13/157 (8%)
Query: 62 CIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIP----ANLFNATNLVY 117
++ + L + + + ++ + +L+ L L+ N L
Sbjct: 146 WLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQV 205
Query: 118 LDLAHNSFC---GPIPDRIKTLKNLTHLDLSSNLLNGSLPE-FLLDLRALTGTLNLSFNQ 173
L L + G L LDLS N L + L +LNLSF
Sbjct: 206 LALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLN-SLNLSFTG 264
Query: 174 FSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLN 210
Q+P+ G + LDL N L P L
Sbjct: 265 LK-QVPK--GLPAKLSVLDLSYNRLD-RNPSPDELPQ 297
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 68.8 bits (168), Expect = 7e-13
Identities = 29/120 (24%), Positives = 43/120 (35%), Gaps = 10/120 (8%)
Query: 85 LGLLNSLTRLSLASNNF---SKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKT-LKNLT 140
+L L+L + S A L LDL+HNS L
Sbjct: 197 PLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLN 256
Query: 141 HLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSG 200
L+LS L +P+ L L+ L+LS+N+ P P + +L L+ N
Sbjct: 257 SLNLSFTGLK-QVPKGLP--AKLS-VLDLSYNRLDR-NPSP-DELPQVGNLSLKGNPFLD 310
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 66.8 bits (163), Expect = 3e-12
Identities = 23/103 (22%), Positives = 37/103 (35%), Gaps = 7/103 (6%)
Query: 75 RNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNSFCGPIPDRI 133
+G + L L L+ N+ A + L L+L+ +P +
Sbjct: 214 ETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQ-VPKGL 272
Query: 134 KTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSG 176
L+ LDLS N L+ P +L + L+L N F
Sbjct: 273 --PAKLSVLDLSYNRLD-RNP-SPDELPQVG-NLSLKGNPFLD 310
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 66.1 bits (161), Expect = 5e-12
Identities = 36/186 (19%), Positives = 62/186 (33%), Gaps = 21/186 (11%)
Query: 50 SDSTPCHWSGIHCIRNRVTSLYLPNRNLTGYMPSELGLLN-----------SLTRLSLAS 98
SD P S +C+ LY R+L + + SL RL++ +
Sbjct: 18 SDPKPDWSSAFNCLGAADVELYGGGRSLEYLLKRVDTEADLGQFTDIIKSLSLKRLTVRA 77
Query: 99 NNFSKPIPAN---LFNATNLVYLDLAHNSFCGPIPDRI--KTLKNLTHLDLSSNLLNGSL 153
I + + L L L + G P + T +L L+L +
Sbjct: 78 ARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWAT-R 136
Query: 154 PEFLLDLRALTGT----LNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLL 209
+L +L+ L+++ E FP + +LDL +N GE + +L
Sbjct: 137 DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALC 196
Query: 210 NQGPTA 215
Sbjct: 197 PLKFPT 202
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 80.5 bits (199), Expect = 2e-16
Identities = 34/162 (20%), Positives = 51/162 (31%), Gaps = 11/162 (6%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNSFC 126
T L L + NLT + L L + L+ N K I + F L L +++N
Sbjct: 229 TILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEK-IMYHPFVKMQRLERLYISNNRL- 284
Query: 127 GPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFP 186
+ + + L LDLS N L + L L L N +
Sbjct: 285 VALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLE-NLYLDHNSIV-TLKL--STHH 339
Query: 187 VMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGLCGFPLQ 228
+ +L L +N+ N A C Q
Sbjct: 340 TLKNLTLSHNDWD-CNSLRALFRNVARPAVDDADQHCKIDYQ 380
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 3e-14
Identities = 29/155 (18%), Positives = 53/155 (34%), Gaps = 15/155 (9%)
Query: 70 LYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNSFCGP 128
+++ + Y E LN+ ++ ++ K +PA L + + L+L
Sbjct: 26 VHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRK-LPAALLDSFRQVELLNLNDLQIEE- 83
Query: 129 IPDRI-KTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPV 187
I + L + N + P ++ LT L L N S ++ + P
Sbjct: 84 IDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLT-VLVLERNDLSSLPRGIFHNTPK 142
Query: 188 MVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGL 222
+ +L + NNNL I F L
Sbjct: 143 LTTLSMSNNNLE-RIE---------DDTFQATTSL 167
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 4e-14
Identities = 30/138 (21%), Positives = 54/138 (39%), Gaps = 7/138 (5%)
Query: 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHN 123
N + N + + L + L+L + I F A + L + N
Sbjct: 45 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEE-IDTYAFAYAHTIQKLYMGFN 103
Query: 124 SFCGPIPDRI-KTLKNLTHLDLSSNLLNGSLPEFLL-DLRALTGTLNLSFNQFSGQIPEM 181
+ +P + + + LT L L N L+ SLP + + LT TL++S N +
Sbjct: 104 AI-RYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLT-TLSMSNNNLERIEDDT 160
Query: 182 YGHFPVMVSLDLRNNNLS 199
+ + +L L +N L+
Sbjct: 161 FQATTSLQNLQLSSNRLT 178
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 66.2 bits (162), Expect = 7e-12
Identities = 32/155 (20%), Positives = 56/155 (36%), Gaps = 24/155 (15%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG 127
T+L + N NL SL L L+SN + + +L +L + ++++N
Sbjct: 144 TTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH-VDLSLI--PSLFHANVSYNLL-- 198
Query: 128 PIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPV 187
+ + LD S N +N ++L L L N + + ++P
Sbjct: 199 ---STLAIPIAVEELDASHNSINVVRGPVNVELT----ILKLQHNNLT-DTAWL-LNYPG 249
Query: 188 MVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGL 222
+V +DL N L +I F L
Sbjct: 250 LVEVDLSYNELE-KIM---------YHPFVKMQRL 274
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 64.7 bits (158), Expect = 2e-11
Identities = 19/141 (13%), Positives = 41/141 (29%), Gaps = 11/141 (7%)
Query: 82 PSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTH 141
S L + + N + +++ + + + +
Sbjct: 14 DSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVEL 73
Query: 142 LDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGE 201
L+L+ + + L + FN P ++ + P++ L L N+LS
Sbjct: 74 LNLNDLQIEEIDTYAFAYAHTIQ-KLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-S 131
Query: 202 IPQVGSLLNQGPTAFSGNPGL 222
+P F P L
Sbjct: 132 LP---------RGIFHNTPKL 143
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 5e-08
Identities = 19/118 (16%), Positives = 35/118 (29%), Gaps = 11/118 (9%)
Query: 105 IPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALT 164
I +NL + + + TL N + ++ + L R +
Sbjct: 13 IDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVE 72
Query: 165 GTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGL 222
LNL+ Q + + + L + N + +P P F P L
Sbjct: 73 -LLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIR-YLP---------PHVFQNVPLL 119
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 80.8 bits (200), Expect = 2e-16
Identities = 29/163 (17%), Positives = 58/163 (35%), Gaps = 27/163 (16%)
Query: 61 HCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDL 120
C+ + L L N L+ +P L L + N+ ++ +P + +L+ +
Sbjct: 67 DCLDRQAHELELNNLGLS-SLPELPP---HLESLVASCNSLTE-LPELPQSLKSLLVDNN 121
Query: 121 AHNSFCGPIP---------------DRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTG 165
+ P ++ L +D+ +N L LP+ L
Sbjct: 122 NLKALSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLK-KLPDLPPSLE---- 176
Query: 166 TLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSL 208
+ NQ ++PE+ + P + ++ NN+L SL
Sbjct: 177 FIAAGNNQLE-ELPEL-QNLPFLTAIYADNNSLKKLPDLPLSL 217
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 7e-13
Identities = 30/172 (17%), Positives = 56/172 (32%), Gaps = 41/172 (23%)
Query: 68 TSLYLPNRNLTGYMPSELG-------------LLNSLTRLSLASNNFSKPIPANLFNATN 114
T Y P G L L L + S +P +
Sbjct: 37 TEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LPELP---PH 92
Query: 115 LVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNG----------------SLPEFLL 158
L L + NS +P+ ++LK+L + + L+ LPE
Sbjct: 93 LESLVASCNSL-TELPELPQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEKLPEL-Q 150
Query: 159 DLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLN 210
+ L +++ N ++P++ + + NN L E+P++ +L
Sbjct: 151 NSSFLK-IIDVDNNSLK-KLPDLPPS---LEFIAAGNNQLE-ELPELQNLPF 196
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 66.6 bits (163), Expect = 8e-12
Identities = 30/141 (21%), Positives = 52/141 (36%), Gaps = 14/141 (9%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG 127
+ N L EL L LT + +N+ K +P +L + +N
Sbjct: 176 EFIAAGNNQLEE--LPELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNNIL-- 227
Query: 128 PIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPV 187
++ L LT + +NLL +LP+ L LN+ N + +PE+
Sbjct: 228 EELPELQNLPFLTTIYADNNLLK-TLPDLPPSLE----ALNVRDNYLT-DLPELPQSLTF 281
Query: 188 MVSLDLRNNNLSGEIPQVGSL 208
+ + + LS P + L
Sbjct: 282 LDVSENIFSGLSELPPNLYYL 302
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 63.5 bits (155), Expect = 7e-11
Identities = 25/140 (17%), Positives = 47/140 (33%), Gaps = 21/140 (15%)
Query: 82 PSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTL----- 136
P + L S+N ++ +P N + A + + P
Sbjct: 5 PRNVSNTF-LQEPLRHSSNLTE-MPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAV 62
Query: 137 --------KNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVM 188
+ L+L++ L+ SLPE L +L S N + ++PE+ +
Sbjct: 63 SRLRDCLDRQAHELELNNLGLS-SLPELPPHLE----SLVASCNSLT-ELPELPQSLKSL 116
Query: 189 VSLDLRNNNLSGEIPQVGSL 208
+ + LS P + L
Sbjct: 117 LVDNNNLKALSDLPPLLEYL 136
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 4e-10
Identities = 36/136 (26%), Positives = 57/136 (41%), Gaps = 22/136 (16%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG 127
+L + + LT +P SLT L ++ N FS + NL YL+ + N
Sbjct: 260 EALNVRDNYLTD-LPELPQ---SLTFLDVSENIFSG-LSELP---PNLYYLNASSNEIRS 311
Query: 128 PIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPV 187
+ D +L L++S+N L LP L L SFN + ++PE+ +
Sbjct: 312 -LCD---LPPSLEELNVSNNKLI-ELPALPPRLE----RLIASFNHLA-EVPELPQN--- 358
Query: 188 MVSLDLRNNNLSGEIP 203
+ L + N L E P
Sbjct: 359 LKQLHVEYNPLR-EFP 373
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 2e-09
Identities = 28/136 (20%), Positives = 50/136 (36%), Gaps = 23/136 (16%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG 127
L + + S L SL L++++N + +PA L L + N
Sbjct: 300 YYLNASSNEIR----SLCDLPPSLEELNVSNNKLIE-LPALP---PRLERLIASFNHLAE 351
Query: 128 PIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPV 187
+P+ +NL L + N L P+ + +L N ++PE+ +
Sbjct: 352 -VPE---LPQNLKQLHVEYNPLR-EFPDIPESVE------DLRMNSHLAEVPELPQN--- 397
Query: 188 MVSLDLRNNNLSGEIP 203
+ L + N L E P
Sbjct: 398 LKQLHVETNPLR-EFP 412
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 1e-05
Identities = 16/108 (14%), Positives = 30/108 (27%), Gaps = 14/108 (12%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG 127
L++ L P + L N+ +P NL L + N
Sbjct: 360 KQLHVEYNPLR-EFPDIPESVEDLR-----MNSHLAEVPELP---QNLKQLHVETNPLRE 410
Query: 128 PIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFS 175
PD +++ L ++S + EF + +
Sbjct: 411 -FPD---IPESVEDLRMNSERVV-DPYEFAHETTDKLEDDVFEHHHHH 453
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 80.8 bits (200), Expect = 2e-16
Identities = 42/143 (29%), Positives = 56/143 (39%), Gaps = 12/143 (8%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG 127
L L L L L +LT L LA+N S P L T L L L N
Sbjct: 224 DELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISN 279
Query: 128 PIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPV 187
P + L LT+L+L+ N L + +L+ LT L L FN S P
Sbjct: 280 ISP--LAGLTALTNLELNENQLED--ISPISNLKNLT-YLTLYFNNISDISP--VSSLTK 332
Query: 188 MVSLDLRNNNLSGEIPQVGSLLN 210
+ L NN +S + + +L N
Sbjct: 333 LQRLFFYNNKVSD-VSSLANLTN 354
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 79.6 bits (197), Expect = 5e-16
Identities = 29/144 (20%), Positives = 52/144 (36%), Gaps = 12/144 (8%)
Query: 67 VTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFC 126
L N+T L+ +T L + NL ++ ++N
Sbjct: 26 KMKTVLGKTNVTD--TVSQTDLDQVTTLQADRLGIKSI--DGVEYLNNLTQINFSNNQLT 81
Query: 127 GPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFP 186
P +K L L + +++N + L +L LT L L NQ + P +
Sbjct: 82 DITP--LKNLTKLVDILMNNNQIAD--ITPLANLTNLT-GLTLFNNQITDIDP--LKNLT 134
Query: 187 VMVSLDLRNNNLSGEIPQVGSLLN 210
+ L+L +N +S I + L +
Sbjct: 135 NLNRLELSSNTISD-ISALSGLTS 157
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 77.7 bits (192), Expect = 2e-15
Identities = 40/143 (27%), Positives = 55/143 (38%), Gaps = 13/143 (9%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG 127
L N +T L L +L RL ++SN S + L TNL L +N
Sbjct: 159 QQLSFGN-QVTD--LKPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISD 213
Query: 128 PIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPV 187
P + L NL L L+ N L L L LT L+L+ NQ S + +
Sbjct: 214 ITP--LGILTNLDELSLNGNQLKD--IGTLASLTNLT-DLDLANNQISN-LAPL-SGLTK 266
Query: 188 MVSLDLRNNNLSGEIPQVGSLLN 210
+ L L N +S I + L
Sbjct: 267 LTELKLGANQISN-ISPLAGLTA 288
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 72.7 bits (179), Expect = 8e-14
Identities = 34/136 (25%), Positives = 58/136 (42%), Gaps = 12/136 (8%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG 127
+ + N + + L L +LT L+L +N + P L N TNL L+L+ N+
Sbjct: 93 VDILMNNNQIAD--ITPLANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISD 148
Query: 128 PIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPV 187
+ L +L L + + + + L +L L L++S N+ S I +
Sbjct: 149 ISA--LSGLTSLQQLSFGNQVTD---LKPLANLTTLE-RLDISSNKVSD-ISVL-AKLTN 200
Query: 188 MVSLDLRNNNLSGEIP 203
+ SL NN +S P
Sbjct: 201 LESLIATNNQISDITP 216
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 69.2 bits (170), Expect = 1e-12
Identities = 28/138 (20%), Positives = 51/138 (36%), Gaps = 10/138 (7%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG 127
L+ N ++ S L L ++ LS N S P L N T + L L ++
Sbjct: 334 QRLFFYNNKVSD--VSSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTN 389
Query: 128 PIPDRIKTLKNLTHLDLSSNLLNG-SLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFP 186
+ N++ + N+ P + D + T ++++N S E+ F
Sbjct: 390 APVN---YKANVSIPNTVKNVTGALIAPATISDGGSYT-EPDITWNLPS-YTNEVSYTFS 444
Query: 187 VMVSLDLRNNNLSGEIPQ 204
V++ SG + Q
Sbjct: 445 QPVTIGKGTTTFSGTVTQ 462
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 6e-05
Identities = 13/78 (16%), Positives = 25/78 (32%), Gaps = 6/78 (7%)
Query: 133 IKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLD 192
L L + ++ DL +T TL I + + + ++
Sbjct: 20 DTALAEKMKTVLGKTNVTDTVS--QTDLDQVT-TLQADRLGIKS-IDGV-EYLNNLTQIN 74
Query: 193 LRNNNLSGEIPQVGSLLN 210
NN L+ I + +L
Sbjct: 75 FSNNQLTD-ITPLKNLTK 91
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 80.0 bits (197), Expect = 6e-16
Identities = 37/175 (21%), Positives = 55/175 (31%), Gaps = 15/175 (8%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNSFC 126
T L L + NLT + L L + L+ N K I + F L L +++N
Sbjct: 235 TILKLQHNNLT--DTAWLLNYPGLVEVDLSYNELEK-IMYHPFVKMQRLERLYISNNRL- 290
Query: 127 GPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFP 186
+ + + L LDLS N L + L L L N +
Sbjct: 291 VALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLE-NLYLDHNSIV-TLKL--STHH 345
Query: 187 VMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGLCGFPLQSP----CPEPENP 237
+ +L L +N+ N A C Q C E + P
Sbjct: 346 TLKNLTLSHNDWD-CNSLRALFRNVARPAVDDADQHCKIDYQLEHGLCCKESDKP 399
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 72.3 bits (177), Expect = 1e-13
Identities = 30/138 (21%), Positives = 54/138 (39%), Gaps = 7/138 (5%)
Query: 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHN 123
N + N + + L + L+L + I F A + L + N
Sbjct: 51 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEE-IDTYAFAYAHTIQKLYMGFN 109
Query: 124 SFCGPIPDRI-KTLKNLTHLDLSSNLLNGSLPEFLL-DLRALTGTLNLSFNQFSGQIPEM 181
+ +P + + + LT L L N L+ SLP + + LT TL++S N +
Sbjct: 110 AI-RYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLT-TLSMSNNNLERIEDDT 166
Query: 182 YGHFPVMVSLDLRNNNLS 199
+ + +L L +N L+
Sbjct: 167 FQATTSLQNLQLSSNRLT 184
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 71.9 bits (176), Expect = 2e-13
Identities = 28/138 (20%), Positives = 49/138 (35%), Gaps = 17/138 (12%)
Query: 88 LNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNSFCGPIPDRI-KTLKNLTHLDLS 145
LN+ ++ ++ K +PA L + + L+L I + L +
Sbjct: 50 LNNQKIVTFKNSTMRK-LPAALLDSFRQVELLNLNDLQIEE-IDTYAFAYAHTIQKLYMG 107
Query: 146 SNLLNGSLPEFLL-DLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ 204
N + LP + ++ LT L L N S ++ + P + +L + NNNL I
Sbjct: 108 FNAIR-YLPPHVFQNVPLLT-VLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLE-RIE- 163
Query: 205 VGSLLNQGPTAFSGNPGL 222
F L
Sbjct: 164 --------DDTFQATTSL 173
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 66.9 bits (163), Expect = 9e-12
Identities = 32/155 (20%), Positives = 56/155 (36%), Gaps = 24/155 (15%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG 127
T+L + N NL SL L L+SN + + +L +L + ++++N
Sbjct: 150 TTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH-VDLSLI--PSLFHANVSYNLL-- 204
Query: 128 PIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPV 187
+ + LD S N +N ++L L L N + + ++P
Sbjct: 205 ---STLAIPIAVEELDASHNSINVVRGPVNVELT----ILKLQHNNLT-DTAWL-LNYPG 255
Query: 188 MVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGL 222
+V +DL N L +I F L
Sbjct: 256 LVEVDLSYNELE-KIM---------YHPFVKMQRL 280
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 63.4 bits (154), Expect = 1e-10
Identities = 20/151 (13%), Positives = 44/151 (29%), Gaps = 11/151 (7%)
Query: 72 LPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPD 131
P + + S L + + N + +++
Sbjct: 10 KPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAA 69
Query: 132 RIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSL 191
+ + + + L+L+ + + L + FN P ++ + P++ L
Sbjct: 70 LLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQ-KLYMGFNAIRYLPPHVFQNVPLLTVL 128
Query: 192 DLRNNNLSGEIPQVGSLLNQGPTAFSGNPGL 222
L N+LS +P F P L
Sbjct: 129 VLERNDLS-SLP---------RGIFHNTPKL 149
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 56.5 bits (136), Expect = 1e-08
Identities = 30/164 (18%), Positives = 49/164 (29%), Gaps = 11/164 (6%)
Query: 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSF 125
+ + L L M + L RL +++N + L LDL+HN
Sbjct: 255 GLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHL 313
Query: 126 CGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHF 185
+ L +L L N + +L L L L LS N + F
Sbjct: 314 LH-VERNQPQFDRLENLYLDHNSIV-TLK--LSTHHTLK-NLTLSHNDWDC-NSLRAL-F 366
Query: 186 PVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGLCGFPLQS 229
+ + + + +I L G + LQ
Sbjct: 367 RNVARPAVDDADQHCKIDY---QLEHGLCCKESDKPYLDRLLQY 407
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 77.4 bits (191), Expect = 1e-15
Identities = 51/290 (17%), Positives = 95/290 (32%), Gaps = 96/290 (33%)
Query: 360 KVVVGR--GSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN 417
V + R G +VAV++L + +DF+ E++ + + IV+ + Y
Sbjct: 38 SVELCRYDPLGDNTGALVAVKQLQH-SGPDQQRDFQREIQILKALHSDFIVKYRGVSYGP 96
Query: 418 DEK--LLISDFIRNGSL----------------------------YAALHGF-------- 439
+ L+ +++ +G L Y
Sbjct: 97 GRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAAR 156
Query: 440 ---------------GLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSK 484
GL +LLP + K+ +V S I + APE+
Sbjct: 157 NILVESEAHVKIADFGLAKLLP----LDKDYYVVREPGQSPIF-----WYAPESLSDN-I 206
Query: 485 FTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVK- 542
F+++ DV+SFG+VL E+ T + + + R+ LS +++ L++
Sbjct: 207 FSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCE-----RDVPALSRLLE--LLEE 259
Query: 543 ------------EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580
E+H + C P+ RP + LD
Sbjct: 260 GQRLPAPPACPAEVH---------ELMKLCWAPSPQDRPSFSALGPQLDM 300
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 77.0 bits (190), Expect = 1e-15
Identities = 40/161 (24%), Positives = 65/161 (40%), Gaps = 24/161 (14%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHN--S 124
T + ++ LT +P+ G+ +S TRL L SN +P +F T L L L+ N S
Sbjct: 10 TEIRCNSKGLT-SVPT--GIPSSATRLELESNKLQS-LPHGVFDKLTQLTKLSLSSNGLS 65
Query: 125 FCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGH 184
F G +L +LDLS N + ++ L L L L+ + Q+ E +
Sbjct: 66 FKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLE-HLDFQHSNLK-QMSE-FSV 121
Query: 185 FPVMVSL---DLRNNNLSGEIPQVGSLLNQGPTAFSGNPGL 222
F + +L D+ + + F+G L
Sbjct: 122 FLSLRNLIYLDISHTHTR-VAF---------NGIFNGLSSL 152
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 74.7 bits (184), Expect = 8e-15
Identities = 32/115 (27%), Positives = 47/115 (40%), Gaps = 6/115 (5%)
Query: 88 LNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNSFCGPIPDRI-KTLKNLTHLDLS 145
L +L L ++ + +F ++L L +A NSF I L+NLT LDLS
Sbjct: 125 LRNLIYLDISHTHTRV-AFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLS 183
Query: 146 SNLLNGSLPEFLLD-LRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLS 199
L L + L +L LN+S N F Y + LD N++
Sbjct: 184 QCQLE-QLSPTAFNSLSSLQ-VLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIM 236
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 71.6 bits (176), Expect = 6e-14
Identities = 36/141 (25%), Positives = 53/141 (37%), Gaps = 7/141 (4%)
Query: 67 VTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFS-KPIPANLF-NATNLVYLDLAHNS 124
T L L + L L LT+LSL+SN S K + T+L YLDL+ N
Sbjct: 30 ATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNG 89
Query: 125 FCGPIPDRIKTLKNLTHLDLSSNLLNGSLPE--FLLDLRALTGTLNLSFNQFSGQIPEMY 182
+ L+ L HLD + L + E L LR L L++S ++
Sbjct: 90 VIT-MSSNFLGLEQLEHLDFQHSNLK-QMSEFSVFLSLRNLI-YLDISHTHTRVAFNGIF 146
Query: 183 GHFPVMVSLDLRNNNLSGEIP 203
+ L + N+
Sbjct: 147 NGLSSLEVLKMAGNSFQENFL 167
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 63.5 bits (155), Expect = 4e-11
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 7/112 (6%)
Query: 68 TSLYLP-NRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNA-TNLVYLDLAHNSF 125
L + N ++P L +LT L L+ + + FN+ ++L L+++HN+F
Sbjct: 153 EVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQ-LSPTAFNSLSSLQVLNMSHNNF 211
Query: 126 CGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLD--LRALTGTLNLSFNQFS 175
K L +L LD S N + + + L +L LNL+ N F+
Sbjct: 212 FSLDTFPYKCLNSLQVLDYSLNHIM-TSKKQELQHFPSSLA-FLNLTQNDFA 261
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 77.5 bits (191), Expect = 3e-15
Identities = 37/157 (23%), Positives = 60/157 (38%), Gaps = 16/157 (10%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG 127
+R+ T +PS GL ++ L L+ N + +L NL L L +
Sbjct: 8 GVCDGRSRSFT-SIPS--GLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRI-N 63
Query: 128 PIPDRI-KTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSG-QIPEMYGHF 185
I +L +L HLDLS N L+ + L +L LNL N + + ++ +
Sbjct: 64 TIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLK-YLNLMGNPYQTLGVTSLFPNL 122
Query: 186 PVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGL 222
+ +L + N EI F+G L
Sbjct: 123 TNLQTLRIGNVETFSEIR---------RIDFAGLTSL 150
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 76.7 bits (189), Expect = 6e-15
Identities = 32/139 (23%), Positives = 59/139 (42%), Gaps = 9/139 (6%)
Query: 67 VTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNSF 125
+ L++P L + + LL + R+++ ++ +P + + +L +LDL+ N
Sbjct: 288 IRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFL-VPCSFSQHLKSLEFLDLSENLM 346
Query: 126 ---CGPIPDRIKTLKNLTHLDLSSNLLN--GSLPEFLLDLRALTGTLNLSFNQFSGQIPE 180
+L L LS N L E LL L+ LT +L++S N F +P+
Sbjct: 347 VEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLT-SLDISRNTFH-PMPD 404
Query: 181 MYGHFPVMVSLDLRNNNLS 199
M L+L + +
Sbjct: 405 SCQWPEKMRFLNLSSTGIR 423
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 76.3 bits (188), Expect = 8e-15
Identities = 35/159 (22%), Positives = 62/159 (38%), Gaps = 29/159 (18%)
Query: 64 RNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHN 123
+N + S+ L L +LT L ++ N F +P + + +L+L+
Sbjct: 370 QNHLRSMQKTGEILLT--------LKNLTSLDISRNTFHP-MPDSCQWPEKMRFLNLSST 420
Query: 124 SFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYG 183
+ I + L LD+S+N L+ S FL L+ L +S N+ +P+
Sbjct: 421 GI-RVVKTCI--PQTLEVLDVSNNNLD-SFSLFLPRLQ----ELYISRNKLK-TLPD-AS 470
Query: 184 HFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGL 222
FPV++ + + N L +P F L
Sbjct: 471 LFPVLLVMKISRNQLK-SVP---------DGIFDRLTSL 499
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 73.6 bits (181), Expect = 6e-14
Identities = 28/136 (20%), Positives = 53/136 (38%), Gaps = 5/136 (3%)
Query: 67 VTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNSF 125
+ SL L +T +L +L L L S+ + I + F + +L +LDL+ N
Sbjct: 28 MKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINT-IEGDAFYSLGSLEHLDLSDNHL 86
Query: 126 CGPIPDRIKTLKNLTHLDLSSNLLNG-SLPEFLLDLRALTGTLNLSFNQFSGQIPEMY-G 183
L +L +L+L N + +L L TL + + +I +
Sbjct: 87 SSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQ-TLRIGNVETFSEIRRIDFA 145
Query: 184 HFPVMVSLDLRNNNLS 199
+ L+++ +L
Sbjct: 146 GLTSLNELEIKALSLR 161
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 73.2 bits (180), Expect = 9e-14
Identities = 29/131 (22%), Positives = 49/131 (37%), Gaps = 11/131 (8%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG 127
TSL + +RN MP + L+L+S + + L LD+++N+
Sbjct: 390 TSLDI-SRNTFHPMPDSCQWPEKMRFLNLSSTGIRV-VKTCIP--QTLEVLDVSNNNL-D 444
Query: 128 PIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPV 187
L L L +S N L +LP+ L L + +S NQ ++
Sbjct: 445 SFSLF---LPRLQELYISRNKLK-TLPDASL-FPVLL-VMKISRNQLKSVPDGIFDRLTS 498
Query: 188 MVSLDLRNNNL 198
+ + L N
Sbjct: 499 LQKIWLHTNPW 509
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 56.7 bits (137), Expect = 1e-08
Identities = 19/127 (14%), Positives = 43/127 (33%), Gaps = 7/127 (5%)
Query: 88 LNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSN 147
LN L + + ++ + + L + + L+ + + + ++
Sbjct: 263 LNGLGDFNPSESDVVSELG--KVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENS 320
Query: 148 LLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSL---DLRNNNLSGEIPQ 204
+ F L++L L+LS N + + SL L N+L + +
Sbjct: 321 KVFLVPCSFSQHLKSLE-FLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLR-SMQK 378
Query: 205 VGSLLNQ 211
G +L
Sbjct: 379 TGEILLT 385
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 55.5 bits (134), Expect = 3e-08
Identities = 18/163 (11%), Positives = 55/163 (33%), Gaps = 13/163 (7%)
Query: 68 TSLYLPNRN-LTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNA-TNLVYLDLAHNSF 125
+L + N + + L SL L + + + + + ++ +L L +
Sbjct: 126 QTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRN-YQSQSLKSIRDIHHLTLHLSES 184
Query: 126 CGPIPDRIKTLKNLTHLDLSSNLLNG------SLPEFLLDLRALTGTLNLSFNQFSGQIP 179
+ L ++ +L+L L + E ++ L ++ ++ ++
Sbjct: 185 AFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELL 244
Query: 180 EMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGL 222
++ + + ++ + L+G +G S +
Sbjct: 245 KLLRYILELSEVEFDDCTLNG----LGDFNPSESDVVSELGKV 283
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 54.0 bits (130), Expect = 9e-08
Identities = 17/87 (19%), Positives = 29/87 (33%), Gaps = 6/87 (6%)
Query: 61 HCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDL 120
CI + L + N NL L L L ++ N +P L+ + +
Sbjct: 427 TCIPQTLEVLDVSNNNLD-SFSLFL---PRLQELYISRNKLKT-LPDASL-FPVLLVMKI 480
Query: 121 AHNSFCGPIPDRIKTLKNLTHLDLSSN 147
+ N L +L + L +N
Sbjct: 481 SRNQLKSVPDGIFDRLTSLQKIWLHTN 507
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 51.3 bits (123), Expect = 7e-07
Identities = 23/171 (13%), Positives = 49/171 (28%), Gaps = 25/171 (14%)
Query: 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKP----------IPANLFNATN 114
+ V L L + NL + S L + + + + S + + +
Sbjct: 196 SSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSE 255
Query: 115 LVYLDLAHNSFCGPIPDRIKTLK--------NLTHLDLSSNLLNGSLPEFLLDLRALTGT 166
+ + D N P + + L + L L L +
Sbjct: 256 VEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVK-R 314
Query: 167 LNLSFNQFSGQIPEMYGHFPVMVS---LDLRNNNLSGEIPQVGSLLNQGPT 214
+ + ++ +P + S LDL N + E + + P+
Sbjct: 315 ITVENSKVF-LVPC--SFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPS 362
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 75.8 bits (186), Expect = 1e-14
Identities = 35/166 (21%), Positives = 57/166 (34%), Gaps = 17/166 (10%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG 127
L + N LT +P L ++ +N + +P T+L L + +N
Sbjct: 123 KHLDVDNNQLT-MLPELPA---LLEYINADNNQLTM-LPELP---TSLEVLSVRNNQLTF 174
Query: 128 PIPDRIKTLKNLTHLDLSSNLLNGSLPEF---LLDLRALTGTLNLSFNQFSGQIPEMYGH 184
+P+ ++L LD+S+NLL SLP N+ + IPE
Sbjct: 175 -LPE---LPESLEALDVSTNLLE-SLPAVPVRNHHSEETEIFFRCRENRIT-HIPENILS 228
Query: 185 FPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGLCGFPLQSP 230
++ L +N LS I + S P Q
Sbjct: 229 LDPTCTIILEDNPLSSRIRESLSQQTAQPDYHGPRIYFSMSDGQQN 274
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 70.8 bits (173), Expect = 4e-13
Identities = 41/148 (27%), Positives = 63/148 (42%), Gaps = 22/148 (14%)
Query: 62 CIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLA 121
C+ N+ + L L NL+ +P L +T L + N +P +L YLD
Sbjct: 56 CLINQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALIS-LPELP---ASLEYLDAC 108
Query: 122 HNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEM 181
N +P+ +L HLD+ +N L LPE L +N NQ + +PE+
Sbjct: 109 DNRL-STLPELPA---SLKHLDVDNNQLT-MLPELPALLE----YINADNNQLT-MLPEL 158
Query: 182 YGHFPVMVSLDLRNNNLSGEIP-QVGSL 208
+ L +RNN L+ +P SL
Sbjct: 159 PTS---LEVLSVRNNQLT-FLPELPESL 182
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 56.5 bits (136), Expect = 1e-08
Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 15/128 (11%)
Query: 81 MPSELGLLNSLTRLSLASNNFSKPIPANLFNA----TNLVYLDLAHNSFCGPIPDRIKTL 136
M L + N+ + + N A+ F+A N + + + +
Sbjct: 1 MSIMLPINNNFSLSQNSFYNTISGTYADYFSAWDKWEKQALPGENRNEAVSLLKECL--I 58
Query: 137 KNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNN 196
+ L L+ L+ SLP+ L +T L ++ N +PE+ + LD +N
Sbjct: 59 NQFSELQLNRLNLS-SLPDNL--PPQIT-VLEITQNALI-SLPELPAS---LEYLDACDN 110
Query: 197 NLSGEIPQ 204
LS +P+
Sbjct: 111 RLS-TLPE 117
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 74.8 bits (184), Expect = 2e-14
Identities = 38/157 (24%), Positives = 55/157 (35%), Gaps = 15/157 (9%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNA-TNLVYLDLAHNSFC 126
L L NLT L L+ L L L N + I F L L+++H +
Sbjct: 155 EQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINA-IRDYSFKRLYRLKVLEISHWPYL 213
Query: 127 GPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLL-DLRALTGTLNLSFNQFSGQIPEMYGHF 185
+ NLT L ++ L ++P + L L LNLS+N S M
Sbjct: 214 DTMTPNCLYGLNLTSLSITHCNLT-AVPYLAVRHLVYLR-FLNLSYNPISTIEGSMLHEL 271
Query: 186 PVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGL 222
+ + L L+ + P AF G L
Sbjct: 272 LRLQEIQLVGGQLA-VVE---------PYAFRGLNYL 298
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 74.0 bits (182), Expect = 3e-14
Identities = 43/163 (26%), Positives = 55/163 (33%), Gaps = 23/163 (14%)
Query: 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNS 124
L L + E L L L N S + F N NL L L N
Sbjct: 33 ETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSA-VEPGAFNNLFNLRTLGLRSNR 91
Query: 125 FCGPIPDRI-KTLKNLTHLDLSSNLLNGSLPEFLL-DLRALTGTLNLSFNQFSGQIPEMY 182
IP + L NLT LD+S N + L +++ DL L +L + N I
Sbjct: 92 L-KLIPLGVFTGLSNLTKLDISENKIV-ILLDYMFQDLYNLK-SLEVGDNDLV-YISH-- 145
Query: 183 GHF---PVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGL 222
F + L L NL+ IP A S GL
Sbjct: 146 RAFSGLNSLEQLTLEKCNLT-SIP---------TEALSHLHGL 178
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 71.3 bits (175), Expect = 3e-13
Identities = 37/165 (22%), Positives = 61/165 (36%), Gaps = 21/165 (12%)
Query: 61 HCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLD 119
C + ++ + +P G+ L L N + + F + +L L+
Sbjct: 8 EC-SAQDRAVLCHRKRFVA-VPE--GIPTETRLLDLGKNRIKT-LNQDEFASFPHLEELE 62
Query: 120 LAHNSFCGPIPDRI-KTLKNLTHLDLSSNLLNGSLPEFLLD-LRALTGTLNLSFNQFSGQ 177
L N + L NL L L SN L +P + L LT L++S N+
Sbjct: 63 LNENIV-SAVEPGAFNNLFNLRTLGLRSNRLK-LIPLGVFTGLSNLT-KLDISENKIVIL 119
Query: 178 IPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGL 222
+ M+ + SL++ +N+L I AFSG L
Sbjct: 120 LDYMFQDLYNLKSLEVGDNDLV-YIS---------HRAFSGLNSL 154
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 71.3 bits (175), Expect = 3e-13
Identities = 35/162 (21%), Positives = 59/162 (36%), Gaps = 27/162 (16%)
Query: 64 RNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAH 122
N + + +R +G LNSL +L+L N + IP + L+ L L H
Sbjct: 137 DNDLVYI--SHRAFSG--------LNSLEQLTLEKCNLTS-IPTEALSHLHGLIVLRLRH 185
Query: 123 NSFCGPIPDRI-KTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPE- 180
+ I D K L L L++S ++ L LT +L+++ + +P
Sbjct: 186 LNI-NAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLT-SLSITHCNLT-AVPYL 242
Query: 181 MYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGL 222
H + L+L N +S I + L
Sbjct: 243 AVRHLVYLRFLNLSYNPIS-TIE---------GSMLHELLRL 274
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 69.4 bits (170), Expect = 1e-12
Identities = 28/148 (18%), Positives = 55/148 (37%), Gaps = 9/148 (6%)
Query: 54 PCHWSGIHCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NA 112
+ ++ R+ L + + M +LT LS+ N + +P +
Sbjct: 193 DYSFKRLY----RLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTA-VPYLAVRHL 247
Query: 113 TNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLL-DLRALTGTLNLSF 171
L +L+L++N + L L + L L + + L L LN+S
Sbjct: 248 VYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLA-VVEPYAFRGLNYLR-VLNVSG 305
Query: 172 NQFSGQIPEMYGHFPVMVSLDLRNNNLS 199
NQ + ++ + +L L +N L+
Sbjct: 306 NQLTTLEESVFHSVGNLETLILDSNPLA 333
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 73.1 bits (180), Expect = 2e-14
Identities = 52/287 (18%), Positives = 87/287 (30%), Gaps = 91/287 (31%)
Query: 360 KVVVGR--GSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN 417
KV + + G +VAV+ L ++ E++ + + H +I++ K
Sbjct: 46 KVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDA 105
Query: 418 DEK--LLISDFIRNGS----------------LYAA--------LHG------------- 438
L+ +++ GS L+A LH
Sbjct: 106 GAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNV 165
Query: 439 ------------FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFT 486
FGL + +P V S + + APE KF
Sbjct: 166 LLDNDRLVKIGDFGLAKAVP----EGHEYYRVREDGDSPVF-----WYAPECLKEY-KFY 215
Query: 487 QKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLES------------LVRKAFRERRPLS 533
DV+SFG+ L E+LT + P + + L+ + R RP
Sbjct: 216 YASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRP-- 273
Query: 534 EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580
E++ H+ NC E + FRP + L
Sbjct: 274 ----DKCPAEVY---------HLMKNCWETEASFRPTFENLIPILKT 307
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 72.7 bits (179), Expect = 2e-14
Identities = 39/167 (23%), Positives = 55/167 (32%), Gaps = 23/167 (13%)
Query: 61 HCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLD 119
C + P + L +P G+ + R+ L N S +PA F NL L
Sbjct: 7 VCYNEPKVTTSCPQQGLQ-AVPV--GIPAASQRIFLHGNRISH-VPAASFRACRNLTILW 62
Query: 120 LAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLP-EFLLDLRALTGTLNLSFNQFSGQI 178
L N L L LDLS N S+ L L TL+L ++
Sbjct: 63 LHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLH-TLHLDRCGLQ-EL 120
Query: 179 PEMYGHFPVMVSL---DLRNNNLSGEIPQVGSLLNQGPTAFSGNPGL 222
G F + +L L++N L +P F L
Sbjct: 121 GP--GLFRGLAALQYLYLQDNALQ-ALP---------DDTFRDLGNL 155
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 72.7 bits (179), Expect = 3e-14
Identities = 39/161 (24%), Positives = 56/161 (34%), Gaps = 22/161 (13%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNA-TNLVYLDLAHNSFC 126
++L ++ + +LT L L SN ++ I A F L LDL+ N+
Sbjct: 35 QRIFLHGNRISHVPAASFRACRNLTILWLHSNVLAR-IDAAAFTGLALLEQLDLSDNAQL 93
Query: 127 GPIPDRI-KTLKNLTHLDLSSNLLNGSLPEFLLD-LRALTGTLNLSFNQFSGQIPEMYGH 184
+ L L L L L L L L AL L L N +P+
Sbjct: 94 RSVDPATFHGLGRLHTLHLDRCGLQ-ELGPGLFRGLAALQ-YLYLQDNALQ-ALPD--DT 148
Query: 185 FPVMVSL---DLRNNNLSGEIPQVGSLLNQGPTAFSGNPGL 222
F + +L L N +S +P AF G L
Sbjct: 149 FRDLGNLTHLFLHGNRIS-SVP---------ERAFRGLHSL 179
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 1e-13
Identities = 45/166 (27%), Positives = 63/166 (37%), Gaps = 18/166 (10%)
Query: 68 TSLYLP-NRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNSF 125
L L N L P+ L L L L + + LF L YL L N+
Sbjct: 83 EQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQE-LGPGLFRGLAALQYLYLQDNAL 141
Query: 126 CGPIPDRI-KTLKNLTHLDLSSNLLNGSLPEFLLD-LRALTGTLNLSFNQFSGQIPEMYG 183
+PD + L NLTHL L N ++ S+PE L +L L L N+ + P +
Sbjct: 142 QA-LPDDTFRDLGNLTHLFLHGNRIS-SVPERAFRGLHSLD-RLLLHQNRVAHVHPHAFR 198
Query: 184 HFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGLCGFPLQS 229
+++L L NNLS +P A + L L
Sbjct: 199 DLGRLMTLYLFANNLS-ALP---------TEALAPLRALQYLRLND 234
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 65.0 bits (159), Expect = 1e-11
Identities = 32/133 (24%), Positives = 45/133 (33%), Gaps = 5/133 (3%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNSFC 126
+L+L L P L +L L L N +P + F + NL +L L N
Sbjct: 108 HTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQA-LPDDTFRDLGNLTHLFLHGNRIS 166
Query: 127 GPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLD-LRALTGTLNLSFNQFSGQIPEMYGHF 185
+ L +L L L N + + L L TL L N S E
Sbjct: 167 SVPERAFRGLHSLDRLLLHQNRVA-HVHPHAFRDLGRLM-TLYLFANNLSALPTEALAPL 224
Query: 186 PVMVSLDLRNNNL 198
+ L L +N
Sbjct: 225 RALQYLRLNDNPW 237
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 74.9 bits (184), Expect = 2e-14
Identities = 30/147 (20%), Positives = 50/147 (34%), Gaps = 20/147 (13%)
Query: 62 CIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLA 121
C+ N L + LT +P L +T L + NN + +PA L L+++
Sbjct: 37 CLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPALP---PELRTLEVS 89
Query: 122 HNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEM 181
N +P L L+ LP L L + NQ + +P +
Sbjct: 90 GNQL-TSLPVLPPGLLELSIFSNPLT----HLPALPSGLC----KLWIFGNQLT-SLPVL 139
Query: 182 YGHFPVMVSLDLRNNNLSGEIPQVGSL 208
+ L + +N L+ L
Sbjct: 140 PPG---LQELSVSDNQLASLPALPSEL 163
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 66.5 bits (162), Expect = 1e-11
Identities = 32/144 (22%), Positives = 55/144 (38%), Gaps = 18/144 (12%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG 127
L + + L +P+ L +L +N + +PA + L L ++ N
Sbjct: 184 QELSVSDNQLA-SLPTLPS---ELYKLWAYNNRLTS-LPALP---SGLKELIVSGNRLTS 235
Query: 128 PIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPV 187
+P L L +S N L SLP L +L++ NQ + ++PE H
Sbjct: 236 -LPV---LPSELKELMVSGNRLT-SLPMLPSGLL----SLSVYRNQLT-RLPESLIHLSS 285
Query: 188 MVSLDLRNNNLSGEIPQVGSLLNQ 211
+++L N LS Q +
Sbjct: 286 ETTVNLEGNPLSERTLQALREITS 309
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 63.4 bits (154), Expect = 1e-10
Identities = 32/153 (20%), Positives = 52/153 (33%), Gaps = 34/153 (22%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG 127
L++ LT P L LS++ N + +PA + L L +N
Sbjct: 124 CKLWIFGNQLTSL-PVLPP---GLQELSVSDNQLAS-LPALP---SELCKLWAYNNQLTS 175
Query: 128 PIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALT----------------GTLNLSF 171
+P L L +S N L SLP +L L L +S
Sbjct: 176 -LPMLPS---GLQELSVSDNQLA-SLPTLPSELYKLWAYNNRLTSLPALPSGLKELIVSG 230
Query: 172 NQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ 204
N+ + +P + + L + N L+ +P
Sbjct: 231 NRLT-SLPVLPSE---LKELMVSGNRLT-SLPM 258
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 46.0 bits (109), Expect = 3e-05
Identities = 17/111 (15%), Positives = 36/111 (32%), Gaps = 10/111 (9%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG 127
L + LT +P L LS+ N ++ +P +L + ++ ++L N
Sbjct: 244 KELMVSGNRLT-SLPMLPS---GLLSLSVYRNQLTR-LPESLIHLSSETTVNLEGN---- 294
Query: 128 PIPDRIKTL-KNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQ 177
P+ +R + +T S + R + +
Sbjct: 295 PLSERTLQALREITSAPGYSGPIIRFDMAGASAPRETRALHLAAADWLVPA 345
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 72.3 bits (178), Expect = 5e-14
Identities = 33/137 (24%), Positives = 53/137 (38%), Gaps = 15/137 (10%)
Query: 64 RNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHN 123
N + S + N G + L+ + +A N + IP L +L L L N
Sbjct: 154 TNPLKSSGIENGAFQG--------MKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGN 202
Query: 124 SFCGPIPDRI-KTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMY 182
+ K L NL L LS N ++ L + L L+L+ N+ ++P
Sbjct: 203 KI-TKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLR-ELHLNNNKLV-KVPGGL 259
Query: 183 GHFPVMVSLDLRNNNLS 199
+ + L NNN+S
Sbjct: 260 ADHKYIQVVYLHNNNIS 276
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 3e-13
Identities = 28/162 (17%), Positives = 66/162 (40%), Gaps = 23/162 (14%)
Query: 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNS 124
++ LYL L +P + +L L + N +K + ++F ++ ++L N
Sbjct: 101 KLERLYLSKNQLK-ELPE--KMPKTLQELRVHENEITK-VRKSVFNGLNQMIVVELGTNP 156
Query: 125 F-CGPIPDRI-KTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMY 182
I + + +K L+++ ++ + ++P+ L +LT L+L N+ + ++
Sbjct: 157 LKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGL--PPSLT-ELHLDGNKIT-KVDAAS 211
Query: 183 -GHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGLC 223
+ L L N++S + + + P L
Sbjct: 212 LKGLNNLAKLGLSFNSIS-AVD---------NGSLANTPHLR 243
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 66.9 bits (164), Expect = 4e-12
Identities = 38/158 (24%), Positives = 55/158 (34%), Gaps = 21/158 (13%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNSFC 126
+ + L +P L L L +N ++ I F N NL L L +N
Sbjct: 34 RVVQCSDLGLE-KVPK--DLPPDTALLDLQNNKITE-IKDGDFKNLKNLHTLILINNKIS 89
Query: 127 GPIPDRI-KTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHF 185
I L L L LS N L LPE + + L L + N+ + ++
Sbjct: 90 K-ISPGAFAPLVKLERLYLSKNQLK-ELPEKM--PKTLQ-ELRVHENEITKVRKSVFNGL 144
Query: 186 PVMVSLDLRNNNL-SGEIPQVGSLLNQGPTAFSGNPGL 222
M+ ++L N L S I AF G L
Sbjct: 145 NQMIVVELGTNPLKSSGIE---------NGAFQGMKKL 173
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 66.6 bits (163), Expect = 4e-12
Identities = 37/167 (22%), Positives = 58/167 (34%), Gaps = 26/167 (15%)
Query: 55 CHWSGIHCIRNR-----------VTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSK 103
CH + C L L N +T + L +L L L +N SK
Sbjct: 31 CHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISK 90
Query: 104 PIPANLF-NATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLL-DLR 161
I F L L L+ N +P+ K K L L + N + + + + L
Sbjct: 91 -ISPGAFAPLVKLERLYLSKNQLKE-LPE--KMPKTLQELRVHENEIT-KVRKSVFNGLN 145
Query: 162 ALTGTLNLSFNQF-SGQIPEMYGHF---PVMVSLDLRNNNLSGEIPQ 204
+ + L N S I G F + + + + N++ IPQ
Sbjct: 146 QMI-VVELGTNPLKSSGIEN--GAFQGMKKLSYIRIADTNIT-TIPQ 188
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 66.2 bits (162), Expect = 5e-12
Identities = 36/158 (22%), Positives = 54/158 (34%), Gaps = 19/158 (12%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNF-SKPIPANLF-NATNLVYLDLAHNSF 125
L + +T S LN + + L +N S I F L Y+ +A +
Sbjct: 124 QELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNI 183
Query: 126 CGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLD-LRALTGTLNLSFNQFSGQIPEMYGH 184
IP +LT L L N + + L L L L LSFN S +
Sbjct: 184 TT-IPQ--GLPPSLTELHLDGNKIT-KVDAASLKGLNNLA-KLGLSFNSISAVDNGSLAN 238
Query: 185 FPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGL 222
P + L L NN L ++ P + + +
Sbjct: 239 TPHLRELHLNNNKLV-KV----------PGGLADHKYI 265
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 5e-09
Identities = 19/115 (16%), Positives = 35/115 (30%), Gaps = 14/115 (12%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHN---- 123
L L +++ L L L L +N K +P L + + + L +N
Sbjct: 219 AKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVK-VPGGLADHKYIQVVYLHNNNISA 277
Query: 124 ----SFCGPIPDRIKTLKNLTHLDLSSN-LLNGSLPEFLLD-LRALTGTLNLSFN 172
FC P + + + L SN + + + + L
Sbjct: 278 IGSNDFCPPGY--NTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRA-AVQLGNY 329
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 70.7 bits (174), Expect = 2e-13
Identities = 47/264 (17%), Positives = 87/264 (32%), Gaps = 73/264 (27%)
Query: 365 RGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYA---NDEKL 421
G VA++ L E + K+ E +A V +P++ RL
Sbjct: 37 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL----LGICLTSTVQ 92
Query: 422 LISDFIRNGSLYAALHG----FGLNRLLP------------------------------- 446
LI+ + G L + G LL
Sbjct: 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 152
Query: 447 ---------GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIV 497
G +K+ E G ++ I ++A E+ ++ +T + DV+S+G+
Sbjct: 153 PQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIK--WMALESILHR-IYTHQSDVWSYGVT 208
Query: 498 LLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHI 556
+ E++T G P G + S++ K R +P P +++ I
Sbjct: 209 VWELMTFGSKPYDGIPA--SEISSILEKGERLPQP------PICTIDVY---------MI 251
Query: 557 ALNCTELDPEFRPRMRTVSESLDR 580
C +D + RP+ R + +
Sbjct: 252 MRKCWMIDADSRPKFRELIIEFSK 275
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 70.4 bits (173), Expect = 2e-13
Identities = 50/291 (17%), Positives = 83/291 (28%), Gaps = 95/291 (32%)
Query: 360 KVVVGR--GSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR-------- 409
KV + R G VAV+ L D + E+E + + H NIV+
Sbjct: 36 KVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTED 95
Query: 410 ----------------LKAFYYANDEKLLISDFIR------NGSLYAALHG--------- 438
LK + N K+ + ++ G Y
Sbjct: 96 GGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAAR 155
Query: 439 --------------FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNV-YLAPEARIYGS 483
FGL + + ++ T V + APE +
Sbjct: 156 NVLVESEHQVKIGDFGLTKAIE------TDKEYYTVKDDRDSP----VFWYAPECLMQS- 204
Query: 484 KFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLES------------LVRKAFRERR 530
KF DV+SFG+ L E+LT + K + +++ R
Sbjct: 205 KFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPC 264
Query: 531 PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
P P E++ + C E P R + + E + +
Sbjct: 265 P------PNCPDEVY---------QLMRKCWEFQPSNRTSFQNLIEGFEAL 300
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 71.5 bits (175), Expect = 3e-13
Identities = 56/325 (17%), Positives = 110/325 (33%), Gaps = 93/325 (28%)
Query: 309 EKTNDAVLVTDEEEGQKGKFFIIDEGFSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSG 368
+ + +D EE + K F+ + + +L G G + + G
Sbjct: 311 DTSVFESPFSDPEELKDKKLFLKRDNLLIADIEL--------GCGNFGSVRQ---GVYRM 359
Query: 369 MGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKA---------------- 412
VA++ L +G ++ E + + ++ +P IVRL
Sbjct: 360 RKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGG 419
Query: 413 -----FYYANDEKLLISDFI-------------------------RN----GSLYAALHG 438
F E++ +S+ RN YA +
Sbjct: 420 GPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISD 479
Query: 439 FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVL 498
FGL++ L +++ T+ + + + + APE + KF+ + DV+S+G+ +
Sbjct: 480 FGLSKALG------ADDSYYTARSAGKW-PLK--WYAPECINFR-KFSSRSDVWSYGVTM 529
Query: 499 LEILT-GRLPDAGPENDGKGLE--SLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFH 555
E L+ G+ P + E + + + R P P E++A
Sbjct: 530 WEALSYGQKPYKKMKGP----EVMAFIEQGKRMECP------PECPPELYA--------- 570
Query: 556 IALNCTELDPEFRPRMRTVSESLDR 580
+ +C E RP TV + +
Sbjct: 571 LMSDCWIYKWEDRPDFLTVEQRMRA 595
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 70.7 bits (173), Expect = 5e-13
Identities = 32/140 (22%), Positives = 51/140 (36%), Gaps = 9/140 (6%)
Query: 67 VTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNA-TNLVYLDLAHNSF 125
T L + ++ S++ L+ L L ++ N + ++F L YLDL+HN
Sbjct: 23 TTILNISQNYISELWTSDILSLSKLRILIISHNRIQY-LDISVFKFNQELEYLDLSHNKL 81
Query: 126 CGPIPDRIKTLKNLTHLDLSSNLLNGSLPE--FLLDLRALTGTLNLSFNQFSGQIPEMYG 183
I NL HLDLS N + +LP ++ L L LS
Sbjct: 82 -VKIS--CHPTVNLKHLDLSFNAFD-ALPICKEFGNMSQLK-FLGLSTTHLEKSSVLPIA 136
Query: 184 HFPVMVSLDLRNNNLSGEIP 203
H + L + +
Sbjct: 137 HLNISKVLLVLGETYGEKED 156
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 69.5 bits (170), Expect = 1e-12
Identities = 34/147 (23%), Positives = 55/147 (37%), Gaps = 12/147 (8%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG 127
+ L ++P L T L+++ N S+ +++ + + L L ++HN
Sbjct: 3 FLVDRSKNGLI-HVPK--DLSQKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQY 59
Query: 128 PIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPV 187
K + L +LDLS N L + L L+LSFN F +P F
Sbjct: 60 LDISVFKFNQELEYLDLSHNKLV-KIS--CHPTVNLK-HLDLSFNAFD-ALPIC-KEFGN 113
Query: 188 MVSL---DLRNNNLSGEIPQVGSLLNQ 211
M L L +L + LN
Sbjct: 114 MSQLKFLGLSTTHLEKSSVLPIAHLNI 140
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 66.0 bits (161), Expect = 1e-11
Identities = 26/116 (22%), Positives = 48/116 (41%), Gaps = 8/116 (6%)
Query: 88 LNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSF--CGPIPDRIKTLKNLTHLDLS 145
++ L ++N + + N + T L L L N I + +K+L LD+S
Sbjct: 323 ISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDIS 382
Query: 146 SNLLNGSLPEFLLD-LRALTGTLNLSFNQFSGQIPEMYGHFPVMV-SLDLRNNNLS 199
N ++ + ++L +LN+S N + I P + LDL +N +
Sbjct: 383 QNSVSYDEKKGDCSWTKSLL-SLNMSSNILTDTIF---RCLPPRIKVLDLHSNKIK 434
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 59.1 bits (143), Expect = 2e-09
Identities = 19/148 (12%), Positives = 48/148 (32%), Gaps = 10/148 (6%)
Query: 58 SGIHCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNA-TNLV 116
++ + + + +++ + + ++ + + + +
Sbjct: 269 DYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSG-TRMVHMLCPSKISPFL 327
Query: 117 YLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTG--TLNLSFNQF 174
+LD ++N + + L L L L N L L + + L++S N
Sbjct: 328 HLDFSNNLLTDTVFENCGHLTELETLILQMNQLK-ELSKIAEMTTQMKSLQQLDISQNSV 386
Query: 175 SGQIPEMYGHFPVMVS---LDLRNNNLS 199
E G S L++ +N L+
Sbjct: 387 --SYDEKKGDCSWTKSLLSLNMSSNILT 412
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 58.3 bits (141), Expect = 4e-09
Identities = 32/208 (15%), Positives = 66/208 (31%), Gaps = 7/208 (3%)
Query: 1 MLLPLLFFALLLLFPAPLCFSLNQDGLALLALKAAIAQDPTRALDSWSESDSTPCHWSGI 60
+ L + + C L +W+
Sbjct: 188 TVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHT 247
Query: 61 HCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNA-TNLVYLD 119
++++ L + L +L+ + S+ F P + ++ +N+ +
Sbjct: 248 TVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFP-QSYIYEIFSNMNIKN 306
Query: 120 LAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIP 179
+ + HLD S+NLL ++ E L L TL L NQ ++
Sbjct: 307 FTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELE-TLILQMNQLK-ELS 364
Query: 180 EMYGHFPVMVS---LDLRNNNLSGEIPQ 204
++ M S LD+ N++S + +
Sbjct: 365 KIAEMTTQMKSLQQLDISQNSVSYDEKK 392
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 54.9 bits (132), Expect = 4e-08
Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 7/109 (6%)
Query: 68 TSLYLPNRNLT-GYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFC 126
L + +++ + SL L+++SN + I L + LDL N
Sbjct: 377 QQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK 434
Query: 127 GPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLD-LRALTGTLNLSFNQF 174
IP ++ L+ L L+++SN L S+P+ + D L +L + L N +
Sbjct: 435 S-IPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQ-KIWLHTNPW 480
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 43.7 bits (103), Expect = 1e-04
Identities = 29/214 (13%), Positives = 61/214 (28%), Gaps = 13/214 (6%)
Query: 1 MLLPLLFFALLLLFPAPLCFSLNQDGLALLALK----AAIAQDPTRALDSWSESDSTPCH 56
+ L +LL+ + +GL + + S
Sbjct: 134 PIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLE 193
Query: 57 WSGIHCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLV 116
S I C+ Y + L + +L + N+F + + L T +
Sbjct: 194 LSNIKCVLEDNKCSYFLS-ILAKLQTNPKLSNLTLNNIETTWNSFIRIL--QLVWHTTVW 250
Query: 117 YLDLAHNSFCGPIPDRI-----KTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSF 171
Y +++ G + R +LK L+ + S++ + N +
Sbjct: 251 YFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMN-IKNFTV 309
Query: 172 NQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQV 205
+ + LD NN L+ + +
Sbjct: 310 SGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFEN 343
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 68.8 bits (169), Expect = 6e-13
Identities = 48/273 (17%), Positives = 92/273 (33%), Gaps = 82/273 (30%)
Query: 361 VVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKA-------- 412
V G VA++ L +G ++ E + + ++ +P IVRL
Sbjct: 26 VRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALM 85
Query: 413 -------------FYYANDEKLLISDFI-------------------------RN----G 430
F E++ +S+ RN
Sbjct: 86 LVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVN 145
Query: 431 SLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCD 490
YA + FGL++ L +++ T+ + + + + APE + KF+ + D
Sbjct: 146 RHYAKISDFGLSKALG------ADDSYYTARSAGKWP-LK--WYAPECINFR-KFSSRSD 195
Query: 491 VYSFGIVLLEILT-GRLPDAGPENDGKGLE--SLVRKAFRERRPLSEVIDPALVKEIHAK 547
V+S+G+ + E L+ G+ P + E + + + R P P E++
Sbjct: 196 VWSYGVTMWEALSYGQKPYKKMKGP----EVMAFIEQGKRMECP------PECPPELY-- 243
Query: 548 RQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580
+ +C E RP TV + +
Sbjct: 244 -------ALMSDCWIYKWEDRPDFLTVEQRMRA 269
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 70.2 bits (172), Expect = 6e-13
Identities = 36/157 (22%), Positives = 57/157 (36%), Gaps = 16/157 (10%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNSFC 126
L+L N + + SL RL L + I F NL YL+L +
Sbjct: 150 RELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIK 209
Query: 127 GPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLL-DLRALTGTLNLSFNQFSGQIPEMYGHF 185
+P+ + L L L++S N + L +L L + +Q S +
Sbjct: 210 D-MPN-LTPLVGLEELEMSGNHFP-EIRPGSFHGLSSLK-KLWVMNSQVSLIERNAFDGL 265
Query: 186 PVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGL 222
+V L+L +NNLS +P F+ L
Sbjct: 266 ASLVELNLAHNNLS-SLP---------HDLFTPLRYL 292
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 68.2 bits (167), Expect = 2e-12
Identities = 40/161 (24%), Positives = 57/161 (35%), Gaps = 19/161 (11%)
Query: 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHN 123
N+ + + R L+ +P G+ ++ L+L NN I A+ F + +L L L N
Sbjct: 54 NQFSKVVCTRRGLS-EVPQ--GIPSNTRYLNLMENNIQM-IQADTFRHLHHLEVLQLGRN 109
Query: 124 SFCGPIPDRI-KTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPE-M 181
S I L +L L+L N L L L L L N IP
Sbjct: 110 SI-RQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLR-ELWLRNNPIE-SIPSYA 166
Query: 182 YGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGL 222
+ P ++ LDL I AF G L
Sbjct: 167 FNRVPSLMRLDLGELKKLEYIS---------EGAFEGLFNL 198
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 67.5 bits (165), Expect = 4e-12
Identities = 29/132 (21%), Positives = 49/132 (37%), Gaps = 4/132 (3%)
Query: 68 TSLYLPNRNLTGYMPSE-LGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFC 126
L L Y+ L +L L+L N +P L L L+++ N F
Sbjct: 174 MRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MPN-LTPLVGLEELEMSGNHFP 231
Query: 127 GPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFP 186
P L +L L + ++ ++ L +L LNL+ N S +++
Sbjct: 232 EIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLV-ELNLAHNNLSSLPHDLFTPLR 290
Query: 187 VMVSLDLRNNNL 198
+V L L +N
Sbjct: 291 YLVELHLHHNPW 302
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 61.7 bits (150), Expect = 3e-10
Identities = 29/156 (18%), Positives = 52/156 (33%), Gaps = 23/156 (14%)
Query: 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNS 124
L L N+ L+ L L L N+ + I F +L L+L N
Sbjct: 76 NTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQ-IEVGAFNGLASLNTLELFDN- 133
Query: 125 FCGPIPDRIKT--------LKNLTHLDLSSNLLNGSLPEFLL-DLRALTGTLNLS-FNQF 174
+ L L L L +N + S+P + + +L L+L +
Sbjct: 134 -------WLTVIPSGAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLM-RLDLGELKKL 184
Query: 175 SGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLN 210
+ + L+L N+ ++P + L+
Sbjct: 185 EYISEGAFEGLFNLKYLNLGMCNIK-DMPNLTPLVG 219
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 6e-05
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 2/83 (2%)
Query: 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNS 124
+ L + + P L+SL +L + ++ S I N F +LV L+LAHN+
Sbjct: 219 GLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSL-IERNAFDGLASLVELNLAHNN 277
Query: 125 FCGPIPDRIKTLKNLTHLDLSSN 147
D L+ L L L N
Sbjct: 278 LSSLPHDLFTPLRYLVELHLHHN 300
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 69.0 bits (169), Expect = 6e-13
Identities = 56/288 (19%), Positives = 86/288 (29%), Gaps = 100/288 (34%)
Query: 373 TVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK--------LLI 423
VAV+ + A+W E+E+ ++H NI+ + A D K LI
Sbjct: 61 EKVAVKVFFTTEEASWFR---ETEIYQTVLMRHENILG----FIAADIKGTGSWTQLYLI 113
Query: 424 SDFIRNGSLYAALHG----------------FGLNRL---LPGT------------SK-- 450
+D+ NGSLY L GL L + T SK
Sbjct: 114 TDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNI 173
Query: 451 -VTKNETIV-----------TSGTGSRISAISNV----YLAPE-----ARIYGSKFTQKC 489
V KN T + I + V Y+ PE +
Sbjct: 174 LVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMA 233
Query: 490 DVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRK-----------AFRERRP------L 532
D+YSFG++L E+ + E LV ++ RP
Sbjct: 234 DMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWS 293
Query: 533 SEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580
S+ + K + C +P R V ++L +
Sbjct: 294 SDECLRQMGKLMTE-------------CWAHNPASRLTALRVKKTLAK 328
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 70.2 bits (172), Expect = 6e-13
Identities = 46/188 (24%), Positives = 74/188 (39%), Gaps = 15/188 (7%)
Query: 17 PLCFSLNQDGLALLALKAAIAQDPTRALDSWSESDSTPCHWSGIHCIRNRVTSLYLPNRN 76
F G + +L + + + + + D + G+ + V + L
Sbjct: 229 AKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLE--ASGVKTCDLSKSK 286
Query: 77 LTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNSFCGPIPDRI-K 134
+ + S L +L+LA N +K I N F T+L+ L+L+ N G I R+ +
Sbjct: 287 IFALLKSVFSHFTDLEQLTLAQNEINK-IDDNAFWGLTHLLKLNLSQNFL-GSIDSRMFE 344
Query: 135 TLKNLTHLDLSSNLLNGSLPEFLLD-LRALTGTLNLSFNQFSGQIPEMYGHFPVMVSL-- 191
L L LDLS N + +L + L L L L NQ +P+ G F + SL
Sbjct: 345 NLDKLEVLDLSYNHI-RALGDQSFLGLPNLK-ELALDTNQLKS-VPD--GIFDRLTSLQK 399
Query: 192 -DLRNNNL 198
L N
Sbjct: 400 IWLHTNPW 407
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 68.6 bits (168), Expect = 2e-12
Identities = 28/133 (21%), Positives = 49/133 (36%), Gaps = 16/133 (12%)
Query: 74 NRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNSFCGPIPDR 132
NR L +P L + + L+ N+ ++ + F +L +L + + I +
Sbjct: 19 NRGLHQ-VPE---LPAHVNYVDLSLNSIAE-LNETSFSRLQDLQFLKVEQQTPGLVIRNN 73
Query: 133 I-KTLKNLTHLDLSSNLLNGSLPEFLLD-LRALTGTLNLSFNQF-SGQIPEMYGHFPVMV 189
+ L +L L L N L + L L L L+ + F +
Sbjct: 74 TFRGLSSLIILKLDYNQF-LQLETGAFNGLANLE-VLTLTQCNLDGAVLSG--NFFKPLT 129
Query: 190 SL---DLRNNNLS 199
SL LR+NN+
Sbjct: 130 SLEMLVLRDNNIK 142
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 64.4 bits (157), Expect = 4e-11
Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 9/115 (7%)
Query: 89 NSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNSFCGPIPDRI-KTLKNLTHLDLSS 146
+ + L+ + + ++F + T+L L LA N I D L +L L+LS
Sbjct: 275 SGVKTCDLSKSKIFA-LLKSVFSHFTDLEQLTLAQNEI-NKIDDNAFWGLTHLLKLNLSQ 332
Query: 147 NLLNGSLPEFLLD-LRALTGTLNLSFNQFSGQIPE-MYGHFPVMVSLDLRNNNLS 199
N L GS+ + + L L L+LS+N + + + P + L L N L
Sbjct: 333 NFL-GSIDSRMFENLDKLE-VLDLSYNHIR-ALGDQSFLGLPNLKELALDTNQLK 384
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 1e-06
Identities = 26/181 (14%), Positives = 44/181 (24%), Gaps = 37/181 (20%)
Query: 68 TSLYLPNRNLTGYMPSEL-GLLNSLTRLSLASNNFSKPIPANLF---NATNLVYLDLAHN 123
L L + N+ P+ + L L N I + L L+
Sbjct: 132 EMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKS-ICEEDLLNFQGKHFTLLRLSSI 190
Query: 124 --------SFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFS 175
++T LDLS N S+ + D A T +L +
Sbjct: 191 TLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSY 250
Query: 176 GQIPEMYG--------------HFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPG 221
+ + DL + + + + FS
Sbjct: 251 NMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIF-ALL---------KSVFSHFTD 300
Query: 222 L 222
L
Sbjct: 301 L 301
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 69.8 bits (171), Expect = 7e-13
Identities = 41/159 (25%), Positives = 61/159 (38%), Gaps = 7/159 (4%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNSFC 126
L+L N + + SL RL L I F +NL YL+LA +
Sbjct: 139 KELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR 198
Query: 127 GPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFP 186
IP+ + L L LDLS N L+ P L L L + +Q + +
Sbjct: 199 E-IPN-LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQ-KLWMIQSQIQVIERNAFDNLQ 255
Query: 187 VMVSLDLRNNNLSGEIPQ--VGSLLNQGPTAFSGNPGLC 223
+V ++L +NNL+ +P L + NP C
Sbjct: 256 SLVEINLAHNNLT-LLPHDLFTPLHHLERIHLHHNPWNC 293
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 67.5 bits (165), Expect = 4e-12
Identities = 38/167 (22%), Positives = 54/167 (32%), Gaps = 31/167 (18%)
Query: 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHN 123
N+ + + +NL +P G+ + L+L N I N F + +L L L+ N
Sbjct: 43 NQFSKVICVRKNLR-EVPD--GISTNTRLLNLHENQIQI-IKVNSFKHLRHLEILQLSRN 98
Query: 124 --------SFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFS 175
+F G L NL L+L N L + L L L L N
Sbjct: 99 HIRTIEIGAFNG--------LANLNTLELFDNRLTTIPNGAFVYLSKLK-ELWLRNNPIE 149
Query: 176 GQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGL 222
+ P + LDL I AF G L
Sbjct: 150 SIPSYAFNRIPSLRRLDLGELKRLSYIS---------EGAFEGLSNL 187
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 62.8 bits (153), Expect = 1e-10
Identities = 40/155 (25%), Positives = 58/155 (37%), Gaps = 15/155 (9%)
Query: 63 IRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLA 121
I L L + + L L L L+ N+ I F NL L+L
Sbjct: 62 ISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRT-IEIGAFNGLANLNTLELF 120
Query: 122 HNSFCGPIPDRI-KTLKNLTHLDLSSNLLNGSLPEFLL-DLRALTGTLNLS-FNQFSGQI 178
N IP+ L L L L +N + S+P + + +L L+L + S I
Sbjct: 121 DNRLTT-IPNGAFVYLSKLKELWLRNNPIE-SIPSYAFNRIPSLR-RLDLGELKRLS-YI 176
Query: 179 PEMYGHF---PVMVSLDLRNNNLSGEIPQVGSLLN 210
E G F + L+L NL EIP + L+
Sbjct: 177 SE--GAFEGLSNLRYLNLAMCNLR-EIPNLTPLIK 208
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 68.7 bits (168), Expect = 8e-13
Identities = 51/289 (17%), Positives = 84/289 (29%), Gaps = 91/289 (31%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVE--AIARVQHPNIVRL-----KAFYYANDEKLLISD 425
VAV+ + + ++F +E + ++H NI R + E LL+ +
Sbjct: 37 RPVAVKVFSFAN----RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVME 92
Query: 426 FIRNGSLYAALHGF----------------GL-------------------------NRL 444
+ NGSL L GL N L
Sbjct: 93 YYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVL 152
Query: 445 L--PGTSKV-------TKNETIVTSGTGSRISAISNV----YLAPE------ARIYGSKF 485
+ GT + + +AIS V Y+APE
Sbjct: 153 VKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESA 212
Query: 486 TQKCDVYSFGIVLLEIL---TGRLPDAGPE-----------NDGKGLESLVRKAFRERRP 531
++ D+Y+ G++ EI T P N + V + ++RP
Sbjct: 213 LKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRP 272
Query: 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580
P KE + L +C + D E R + E +
Sbjct: 273 ---KF-PEAWKENSLAVRSLK--ETIEDCWDQDAEARLTAQXAEERMAE 315
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 67.8 bits (166), Expect = 2e-12
Identities = 57/292 (19%), Positives = 91/292 (31%), Gaps = 99/292 (33%)
Query: 360 KVVVGR--GSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR-------- 409
V + R VVAV++L +DFE E+E + +QH NIV+
Sbjct: 56 SVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL-RDFEREIEILKSLQHDNIVKYKGVCYSA 114
Query: 410 ----------------LKAFYYANDEKLLISDFIR------NGSLY-----------AA- 435
L+ + + E++ ++ G Y A
Sbjct: 115 GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATR 174
Query: 436 --LHG---------FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSK 484
L FGL ++LP +++ I + APE+ K
Sbjct: 175 NILVENENRVKIGDFGLTKVLP------QDKEYYKVKEPGESP-IF--WYAPESLTES-K 224
Query: 485 FTQKCDVYSFGIVLLEILT----------------GRLPDAGPENDGKGLESLVRKAFRE 528
F+ DV+SFG+VL E+ T G L L++ R
Sbjct: 225 FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV--FHLIELLKNNGRL 282
Query: 529 RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580
RP EI+ I C + RP R ++ +D+
Sbjct: 283 PRP------DGCPDEIY---------MIMTECWNNNVNQRPSFRDLALRVDQ 319
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 66.9 bits (164), Expect = 2e-12
Identities = 57/292 (19%), Positives = 91/292 (31%), Gaps = 99/292 (33%)
Query: 360 KVVVGR--GSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR-------- 409
V + R VVAV++L +DFE E+E + +QH NIV+
Sbjct: 25 SVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL-RDFEREIEILKSLQHDNIVKYKGVCYSA 83
Query: 410 ----------------LKAFYYANDEKLLISDFIR------NGSLY-----------AA- 435
L+ + + E++ ++ G Y A
Sbjct: 84 GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATR 143
Query: 436 --LHG---------FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSK 484
L FGL ++LP +++ I + APE+ K
Sbjct: 144 NILVENENRVKIGDFGLTKVLP------QDKEFFKVKEPGESP-IF--WYAPESLTES-K 193
Query: 485 FTQKCDVYSFGIVLLEILT----------------GRLPDAGPENDGKGLESLVRKAFRE 528
F+ DV+SFG+VL E+ T G L L++ R
Sbjct: 194 FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV--FHLIELLKNNGRL 251
Query: 529 RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580
RP EI+ I C + RP R ++ +D+
Sbjct: 252 PRP------DGCPDEIY---------MIMTECWNNNVNQRPSFRDLALRVDQ 288
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 67.0 bits (164), Expect = 3e-12
Identities = 32/160 (20%), Positives = 56/160 (35%), Gaps = 22/160 (13%)
Query: 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNS 124
++ LY+ +L +P L +SL L + N K +P +F N+ +++ N
Sbjct: 103 KLQKLYISKNHLV-EIPP--NLPSSLVELRIHDNRIRK-VPKGVFSGLRNMNCIEMGGNP 158
Query: 125 F-CGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMY- 182
L +L +S L +P+ L L L+L N+ I
Sbjct: 159 LENSGFEPGAFDGLKLNYLRISEAKLT-GIPKDL--PETLN-ELHLDHNKIQ-AIELEDL 213
Query: 183 GHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGL 222
+ + L L +N + I + S P L
Sbjct: 214 LRYSKLYRLGLGHNQIR-MIE---------NGSLSFLPTL 243
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 66.2 bits (162), Expect = 5e-12
Identities = 27/134 (20%), Positives = 51/134 (38%), Gaps = 11/134 (8%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNSFC 126
+ + L +P + T L L +N+ S+ + + F +L L L +N
Sbjct: 36 RVVQCSDLGLK-AVPK--EISPDTTLLDLQNNDISE-LRKDDFKGLQHLYALVLVNNKIS 91
Query: 127 GPIPDRI-KTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHF 185
I ++ L+ L L +S N L +P L +L L + N+ ++
Sbjct: 92 K-IHEKAFSPLRKLQKLYISKNHLV-EIPPNL--PSSLV-ELRIHDNRIRKVPKGVFSGL 146
Query: 186 PVMVSLDLRNNNLS 199
M +++ N L
Sbjct: 147 RNMNCIEMGGNPLE 160
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 1e-11
Identities = 27/139 (19%), Positives = 46/139 (33%), Gaps = 11/139 (7%)
Query: 68 TSLYLPNRNLTGYMPSELGLLN-SLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFC 126
+ + L L L ++ + IP +L L L L HN
Sbjct: 150 NCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKI- 205
Query: 127 GPIPDRI-KTLKNLTHLDLSSNLLNGSLPEFLLD-LRALTGTLNLSFNQFSGQIPEMYGH 184
I L L L N + + L L L L+L N+ S ++P
Sbjct: 206 QAIELEDLLRYSKLYRLGLGHNQIR-MIENGSLSFLPTLR-ELHLDNNKLS-RVPAGLPD 262
Query: 185 FPVMVSLDLRNNNLSGEIP 203
++ + L NN++ ++
Sbjct: 263 LKLLQVVYLHTNNIT-KVG 280
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 5e-11
Identities = 33/165 (20%), Positives = 52/165 (31%), Gaps = 23/165 (13%)
Query: 55 CHWSGIHCIRNR-----------VTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSK 103
CH + C T L L N +++ + L L L L +N SK
Sbjct: 33 CHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISK 92
Query: 104 PIPANLF-NATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRA 162
I F L L ++ N IP +L L + N + LR
Sbjct: 93 -IHEKAFSPLRKLQKLYISKNHLVE-IPPN--LPSSLVELRIHDNRIRKVPKGVFSGLRN 148
Query: 163 LTGTLNLSFNQF-SGQIPEMYGHFPVM--VSLDLRNNNLSGEIPQ 204
+ + + N + G F + L + L+ IP+
Sbjct: 149 MN-CIEMGGNPLENSGFEP--GAFDGLKLNYLRISEAKLT-GIPK 189
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 60.0 bits (146), Expect = 5e-10
Identities = 24/139 (17%), Positives = 43/139 (30%), Gaps = 14/139 (10%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNSFC 126
L+L + + +L + L RL L N I L L L +N
Sbjct: 196 NELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRM-IENGSLSFLPTLRELHLDNNKLS 254
Query: 127 GPIPDRIKTLKNLTHLDLSSNLLNGSLPE-------FLLDLRALTGTLNLSFNQFSGQI- 178
+P + LK L + L +N + + F + ++L N
Sbjct: 255 R-VPAGLPDLKLLQVVYLHTNNIT-KVGVNDFCPVGFGVKRAYYN-GISLFNNPVPYWEV 311
Query: 179 -PEMYGHFPVMVSLDLRNN 196
P + +++ N
Sbjct: 312 QPATFRCVTDRLAIQFGNY 330
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 66.6 bits (163), Expect = 4e-12
Identities = 43/265 (16%), Positives = 87/265 (32%), Gaps = 73/265 (27%)
Query: 365 RGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYA---NDEKL 421
G V ++ + + F+ + AI + H +IVRL
Sbjct: 35 IPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL----LGLCPGSSLQ 90
Query: 422 LISDFIRNGSLYAALHG----FGLNRLLP------------------------------- 446
L++ ++ GSL + G LL
Sbjct: 91 LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKS 150
Query: 447 ---------GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIV 497
G + + + + ++ I ++A E+ +G K+T + DV+S+G+
Sbjct: 151 PSQVQVADFGVADLLPPDDKQLLYSEAKT-PIK--WMALESIHFG-KYTHQSDVWSYGVT 206
Query: 498 LLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHI 556
+ E++T G P AG + L+ K R +P +++ +
Sbjct: 207 VWELMTFGAEPYAGLRL--AEVPDLLEKGERLAQP------QICTIDVY---------MV 249
Query: 557 ALNCTELDPEFRPRMRTVSESLDRV 581
+ C +D RP + ++ R+
Sbjct: 250 MVKCWMIDENIRPTFKELANEFTRM 274
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 66.2 bits (162), Expect = 4e-12
Identities = 42/259 (16%), Positives = 79/259 (30%), Gaps = 64/259 (24%)
Query: 366 GSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425
G T V ++ L + + + F ++++ H ++V DE +L+ +
Sbjct: 34 DYGQLHETEVLLKVLDKAHRNYS-ESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQE 92
Query: 426 FIRNGSLYAAL----HGFGLNRLLPGTSKV------------------TKN-----ETIV 458
F++ GSL L + + L ++ KN E
Sbjct: 93 FVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDR 152
Query: 459 TSGTG----------SRISAISNVYLAP------EARIYGSKFTQKCDVYSFGIVLLEIL 502
+G S ++ E D +SFG L EI
Sbjct: 153 KTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEIC 212
Query: 503 T-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCT 561
+ G P + ++ K + P A E+ ++ NC
Sbjct: 213 SGGDKPLSALDSQRK--LQFYEDRHQLPAP-----KAA---ELA---------NLINNCM 253
Query: 562 ELDPEFRPRMRTVSESLDR 580
+ +P+ RP R + L+
Sbjct: 254 DYEPDHRPSFRAIIRDLNS 272
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 66.2 bits (162), Expect = 4e-12
Identities = 36/203 (17%), Positives = 67/203 (33%), Gaps = 68/203 (33%)
Query: 373 TVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYA-------NDEKLLIS 424
VAV+ + D +W E+E+ ++H NI+ F + + + LI+
Sbjct: 32 ENVAVKIFSSRDEKSWFR---ETELYNTVMLRHENILG---FIASDMTSRHSSTQLWLIT 85
Query: 425 DFIRNGSLYAALHGFGLN-----RLLPGTSK----------------------------- 450
+ GSLY L L+ R++ +
Sbjct: 86 HYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNIL 145
Query: 451 VTKNETIV-----------TSGTGSRISAISNV----YLAPE-----ARIYGSKFTQKCD 490
V KN S + V Y+APE ++ ++ D
Sbjct: 146 VKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVD 205
Query: 491 VYSFGIVLLEILTGRLPDAGPEN 513
+++FG+VL E+ + + E+
Sbjct: 206 IWAFGLVLWEVARRMVSNGIVED 228
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 66.9 bits (164), Expect = 4e-12
Identities = 50/274 (18%), Positives = 82/274 (29%), Gaps = 84/274 (30%)
Query: 363 VGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLL 422
V G T+VAV+ E F E + + HPNIVRL +
Sbjct: 130 VFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI 189
Query: 423 ISDFIRNGSLYAALHG-------------------------------------------- 438
+ + ++ G L
Sbjct: 190 VMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEK 249
Query: 439 -------FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDV 491
FG++R + + + G R + + APEA YG +++ + DV
Sbjct: 250 NVLKISDFGMSREE--------ADGVYAASGGLRQVPVK--WTAPEALNYG-RYSSESDV 298
Query: 492 YSFGIVLLEILT-GRLPDAGPENDGKGLESL--VRKAFRERRPLSEVIDPALVKEIHAKR 548
+SFGI+L E + G P N ++ V K R P +
Sbjct: 299 WSFGILLWETFSLGASPYPNLSNQ----QTREFVEKGGRLPCP------ELCPDAVFR-- 346
Query: 549 QVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582
+ C +P RP T+ + L ++
Sbjct: 347 -------LMEQCWAYEPGQRPSFSTIYQELQSIR 373
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 66.1 bits (162), Expect = 4e-12
Identities = 50/270 (18%), Positives = 83/270 (30%), Gaps = 87/270 (32%)
Query: 370 GAPTVVAVRRLTEG--DATWRFKDFESEVEAIARVQHPNIVRLKAFYYA---NDEKLLIS 424
G VAV+ L DF EV A+ + H N++RL Y +++
Sbjct: 44 GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRL----YGVVLTPPMKMVT 99
Query: 425 DFIRNGSLYAALHG---------------------------------------------- 438
+ GSL L
Sbjct: 100 ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL 159
Query: 439 -----FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYS 493
FGL R LP N+ ++ + + APE+ F+ D +
Sbjct: 160 VKIGDFGLMRALPQ------NDDHYVMQEHRKVP-FA--WCAPESLKTR-TFSHASDTWM 209
Query: 494 FGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLA 552
FG+ L E+ T G+ P G + L + ++ R RP ++I+
Sbjct: 210 FGVTLWEMFTYGQEPWIGLNG-SQILHKIDKEGERLPRP------EDCPQDIY------- 255
Query: 553 TFHIALNCTELDPEFRPRMRTVSESLDRVK 582
++ + C PE RP + + L +
Sbjct: 256 --NVMVQCWAHKPEDRPTFVALRDFLLEAQ 283
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 65.8 bits (161), Expect = 8e-12
Identities = 47/264 (17%), Positives = 88/264 (33%), Gaps = 73/264 (27%)
Query: 365 RGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYA---NDEKL 421
G VA++ L E + K+ E +A V +P++ RL
Sbjct: 37 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL----LGICLTSTVQ 92
Query: 422 LISDFIRNGSLYAALHG----FGLNRLLP------------------------------- 446
LI+ + G L + G LL
Sbjct: 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 152
Query: 447 ---------GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIV 497
G +K+ E G ++ I ++A E+ ++ +T + DV+S+G+
Sbjct: 153 PQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIK--WMALESILHR-IYTHQSDVWSYGVT 208
Query: 498 LLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHI 556
+ E++T G P G + S++ K R +P P +++ I
Sbjct: 209 VWELMTFGSKPYDGIPA--SEISSILEKGERLPQP------PICTIDVY---------MI 251
Query: 557 ALNCTELDPEFRPRMRTVSESLDR 580
+ C +D + RP+ R + +
Sbjct: 252 MVKCWMIDADSRPKFRELIIEFSK 275
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 64.5 bits (158), Expect = 9e-12
Identities = 46/261 (17%), Positives = 88/261 (33%), Gaps = 83/261 (31%)
Query: 372 PTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGS 431
VA++ + EG + +DF E E + ++ HP +V+L L+++F+ +G
Sbjct: 32 KDKVAIKTIREGAMS--EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGC 89
Query: 432 LYAALHG---------------------------------------------------FG 440
L L FG
Sbjct: 90 LSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFG 149
Query: 441 LNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLE 500
+ R + + TS TG++ + + +PE + +++ K DV+SFG+++ E
Sbjct: 150 MTRFV--------LDDQYTSSTGTKF-PVK--WASPEVFSFS-RYSSKSDVWSFGVLMWE 197
Query: 501 ILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALN 559
+ + G++P N + + FR +P ++ I +
Sbjct: 198 VFSEGKIPYENRSN--SEVVEDISTGFRLYKP------RLASTHVY---------QIMNH 240
Query: 560 CTELDPEFRPRMRTVSESLDR 580
C PE RP + L
Sbjct: 241 CWRERPEDRPAFSRLLRQLAE 261
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 1e-11
Identities = 28/189 (14%), Positives = 60/189 (31%), Gaps = 35/189 (18%)
Query: 51 DSTPCH---WSGIHCIRNRVTS----------LYLPNRNLTGYMPSELGLLNSLTRLSLA 97
S PC + L L +L L +++R+ ++
Sbjct: 4 SSPPCECHQEEDFRVTCKDIQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVS 63
Query: 98 SNNFSKPIPANLFNA-TNLVYLDLAHNSFCGPIPDRI-KTLKNLTHLDLSSNLLNGSLPE 155
+ + + ++ F + + ++++ + I K L L L + + L P+
Sbjct: 64 IDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLK-MFPD 122
Query: 156 --FLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVS----LDLRNNNLSGEIPQVGSLL 209
+ L ++ N + IP F + + L L NN + +
Sbjct: 123 LTKVYSTDIFF-ILEITDNPYMTSIPV--NAFQGLCNETLTLKLYNNGFT-SVQ------ 172
Query: 210 NQGPTAFSG 218
AF+G
Sbjct: 173 ---GYAFNG 178
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 1e-09
Identities = 24/145 (16%), Positives = 47/145 (32%), Gaps = 31/145 (21%)
Query: 88 LNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNSFCGPIPDR--IKTLKNLTHLDL 144
L+ +T + + + I + L +L + + PD + + L++
Sbjct: 79 LSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGL-KMFPDLTKVYSTDIFFILEI 137
Query: 145 SSNLLNGSLPEFLLD-LRALTGTLNLSFNQ--------FSG---------------QIPE 180
+ N S+P L T TL L N F+G I +
Sbjct: 138 TDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNGTKLDAVYLNKNKYLTVIDK 197
Query: 181 M--YGHFPVMVSLDLRNNNLSGEIP 203
G + LD+ +++ +P
Sbjct: 198 DAFGGVYSGPSLLDVSQTSVT-ALP 221
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 8e-09
Identities = 23/134 (17%), Positives = 42/134 (31%), Gaps = 10/134 (7%)
Query: 68 TSLYLPNRNLTGYMPSE--LGLLNSLTRLSLASNNFSKPIPANLFN--ATNLVYLDLAHN 123
L + N L P + + L + N + IP N F + L L +N
Sbjct: 108 KFLGIFNTGLK-MFPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNN 166
Query: 124 SFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLD-LRALTGTLNLSFNQFSGQIPEMY 182
F + L + L+ N + + + + L++S + +P
Sbjct: 167 GFTS-VQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT-ALPS-- 222
Query: 183 GHFPVMVSLDLRNN 196
+ L RN
Sbjct: 223 KGLEHLKELIARNT 236
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 66.7 bits (162), Expect = 1e-11
Identities = 36/146 (24%), Positives = 60/146 (41%), Gaps = 16/146 (10%)
Query: 67 VTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFC 126
L +++T LNS+ ++ +++ + + N+ L L N
Sbjct: 23 TIKDNLKKKSVTD--AVTQNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNK-- 76
Query: 127 GPIPD--RIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGH 184
+ D + LKNL L L N + L L DL+ L +L+L N S I + H
Sbjct: 77 --LTDIKPLTNLKNLGWLFLDENKIK-DL-SSLKDLKKLK-SLSLEHNGIS-DINGL-VH 129
Query: 185 FPVMVSLDLRNNNLSGEIPQVGSLLN 210
P + SL L NN ++ +I + L
Sbjct: 130 LPQLESLYLGNNKIT-DITVLSRLTK 154
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 61.7 bits (149), Expect = 3e-10
Identities = 45/155 (29%), Positives = 64/155 (41%), Gaps = 17/155 (10%)
Query: 58 SGIHCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVY 117
GI + N VT L+L LT P L L +L L L N + +L + L
Sbjct: 59 QGIQYLPN-VTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKS 113
Query: 118 LDLAHNSFCGPIPD--RIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFS 175
L L HN I D + L L L L +N + + L L L TL+L NQ S
Sbjct: 114 LSLEHN----GISDINGLVHLPQLESLYLGNNKI--TDITVLSRLTKLD-TLSLEDNQIS 166
Query: 176 GQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLN 210
I + + +L L N++S ++ + L N
Sbjct: 167 -DIVPL-AGLTKLQNLYLSKNHIS-DLRALAGLKN 198
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 53.6 bits (128), Expect = 1e-07
Identities = 41/192 (21%), Positives = 59/192 (30%), Gaps = 17/192 (8%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG 127
SLYL N +T + L L L LSL N S I L T L L L+ N
Sbjct: 134 ESLYLGNNKIT--DITVLSRLTKLDTLSLEDNQISD-IV-PLAGLTKLQNLYLSKN---- 185
Query: 128 PIPD--RIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHF 185
I D + LKNL L+L S +L T+ + PE+
Sbjct: 186 HISDLRALAGLKNLDVLELFSQECLNKPINHQSNLVVPN-TVKNTDGSL--VTPEIISDD 242
Query: 186 PVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGLCGFPLQSPCPEPENPKVHANPEV 245
+++ + E S + P F + P E V + +
Sbjct: 243 GDYEKPNVKWHLP--EFTNEVSFIFYQPVTIGKAKAR--FHGRVTQPLKEVYTVSYDVDG 298
Query: 246 EDGPQNPKNTNF 257
+
Sbjct: 299 TVIKTKVEAGTR 310
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 41.2 bits (96), Expect = 9e-04
Identities = 10/78 (12%), Positives = 26/78 (33%), Gaps = 6/78 (7%)
Query: 133 IKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLD 192
+L + +L ++ + + + + + + P + L
Sbjct: 17 DDAFAETIKDNLKKKSVTD--AVTQNELNSID-QIIANNSDIK-SVQGI-QYLPNVTKLF 71
Query: 193 LRNNNLSGEIPQVGSLLN 210
L N L+ +I + +L N
Sbjct: 72 LNGNKLT-DIKPLTNLKN 88
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 65.1 bits (159), Expect = 1e-11
Identities = 19/141 (13%), Positives = 45/141 (31%), Gaps = 14/141 (9%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNSFC 126
L + +L Y P L + +++ L L + +++ L+L
Sbjct: 177 EELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHIL-LLEIFVDVTSSVECLELRDTDLD 235
Query: 127 GP--------IPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQI 178
+ + ++ ++ L + + L + L L S NQ +
Sbjct: 236 TFHFSELSTGETNSLIKKFTFRNVKITDESLF-QVMKLLNQISGLL-ELEFSRNQLKS-V 292
Query: 179 PE-MYGHFPVMVSLDLRNNNL 198
P+ ++ + + L N
Sbjct: 293 PDGIFDRLTSLQKIWLHTNPW 313
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 64.4 bits (157), Expect = 3e-11
Identities = 37/163 (22%), Positives = 63/163 (38%), Gaps = 23/163 (14%)
Query: 67 VTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNA-TNLVYLDLAHNSF 125
V SL L N +T S+L +L L L SN + I + F++ +L +LDL++N
Sbjct: 54 VKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINT-IEEDSFSSLGSLEHLDLSYNYL 112
Query: 126 CGPIPDRI-KTLKNLTHLDLSSNLLNGSLPE--FLLDLRALTGTLNLSFNQFSGQIPEMY 182
+ K L +LT L+L N +L E L L + + F+ +I
Sbjct: 113 SN-LSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFT-KIQR-- 167
Query: 183 GHFPVMVSL---DLRNNNLSGEIPQVGSLLNQGPTAFSGNPGL 222
F + L ++ ++L P + +
Sbjct: 168 KDFAGLTFLEELEIDASDLQ-SYE---------PKSLKSIQNV 200
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 64.4 bits (157), Expect = 3e-11
Identities = 40/160 (25%), Positives = 63/160 (39%), Gaps = 22/160 (13%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNSFC 126
+ +L +PS GL ++ L L++N + I + NL L L N
Sbjct: 34 GICKGSSGSLN-SIPS--GLTEAVKSLDLSNNRITY-ISNSDLQRCVNLQALVLTSNGI- 88
Query: 127 GPIPDRI-KTLKNLTHLDLSSNLLNGSLPEFLLD-LRALTGTLNLSFNQFSGQIPE--MY 182
I + +L +L HLDLS N L +L L +LT LNL N + + E ++
Sbjct: 89 NTIEEDSFSSLGSLEHLDLSYNYL-SNLSSSWFKPLSSLT-FLNLLGNPYK-TLGETSLF 145
Query: 183 GHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGL 222
H + L + N + +I F+G L
Sbjct: 146 SHLTKLQILRVGNMDTFTKIQ---------RKDFAGLTFL 176
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 59.4 bits (144), Expect = 1e-09
Identities = 16/126 (12%), Positives = 40/126 (31%), Gaps = 13/126 (10%)
Query: 88 LNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSS 146
L L L + +++ + N+ +L L + + ++ L+L
Sbjct: 173 LTFLEELEIDASDLQS-YEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRD 231
Query: 147 NLLNG----SLPEF----LLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNL 198
L+ L L+ + ++ Q+ ++ ++ L+ N L
Sbjct: 232 TDLDTFHFSELSTGETNSLIKKFTFR-NVKITDESLF-QVMKLLNQISGLLELEFSRNQL 289
Query: 199 SGEIPQ 204
+P
Sbjct: 290 KS-VPD 294
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 66.3 bits (161), Expect = 1e-11
Identities = 33/151 (21%), Positives = 54/151 (35%), Gaps = 9/151 (5%)
Query: 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSF 125
R L + L LA + + +L + +LDL+HN
Sbjct: 418 RAAYLDDLRSKFLLENSVLKMEYADVRVLHLAHKDLTVL--CHLEQLLLVTHLDLSHNRL 475
Query: 126 CGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMY--G 183
+P + L+ L L S N L ++ + +L L L L N+ Q +
Sbjct: 476 RA-LPPALAALRCLEVLQASDNALE-NVDG-VANLPRLQ-ELLLCNNRLQ-QSAAIQPLV 530
Query: 184 HFPVMVSLDLRNNNLSGEIPQVGSLLNQGPT 214
P +V L+L+ N+L E L P+
Sbjct: 531 SCPRLVLLNLQGNSLCQEEGIQERLAEMLPS 561
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 65.5 bits (160), Expect = 2e-11
Identities = 37/146 (25%), Positives = 55/146 (37%), Gaps = 16/146 (10%)
Query: 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNS 124
+TSL N ++T + + L LT+L SNN + +L TNL YL N
Sbjct: 42 ATLTSLDCHNSSITDM--TGIEKLTGLTKLICTSNNITTL---DLSQNTNLTYLACDSNK 96
Query: 125 FCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGH 184
+ + L LT+L+ +N L L + LT LN + N + +I H
Sbjct: 97 LTN-LD--VTPLTKLTYLNCDTNKLT-KLD--VSQNPLLT-YLNCARNTLT-EID--VSH 146
Query: 185 FPVMVSLDLRNNNLSGEIPQVGSLLN 210
+ LD N V
Sbjct: 147 NTQLTELDCHLNKKI-TKLDVTPQTQ 171
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 63.2 bits (154), Expect = 1e-10
Identities = 24/132 (18%), Positives = 43/132 (32%), Gaps = 15/132 (11%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG 127
T L ++ LT L + N ++ + L L+ N+
Sbjct: 151 TELDCHLNKKIT--KLDVTPQTQLTTLDCSFNKITELDVSQN---KLLNRLNCDTNNITK 205
Query: 128 PIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPV 187
+ + LT LD SSN L + + L LT + S N + ++
Sbjct: 206 -LD--LNQNIQLTFLDCSSNKLT-EID--VTPLTQLT-YFDCSVNPLT-ELDV--STLSK 255
Query: 188 MVSLDLRNNNLS 199
+ +L +L
Sbjct: 256 LTTLHCIQTDLL 267
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 60.9 bits (148), Expect = 5e-10
Identities = 28/139 (20%), Positives = 54/139 (38%), Gaps = 22/139 (15%)
Query: 71 YLPNRNLTGYMPSELGL----------LNSLTRLSLASNNFSKPIPANLFNATNLVYLDL 120
+ P+ N + + + L +LT L +++ + + + T L L
Sbjct: 14 WFPDDNFASEVAAAFEMQATDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLIC 71
Query: 121 AHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPE 180
N+ + + NLT+L SN L +L + L LT LN N+ + ++
Sbjct: 72 TSNNITT-LD--LSQNTNLTYLACDSNKLT-NLD--VTPLTKLT-YLNCDTNKLT-KLDV 123
Query: 181 MYGHFPVMVSLDLRNNNLS 199
P++ L+ N L+
Sbjct: 124 --SQNPLLTYLNCARNTLT 140
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 60.1 bits (146), Expect = 8e-10
Identities = 19/143 (13%), Positives = 41/143 (28%), Gaps = 14/143 (9%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG 127
T+L+ +L +L L K + ++ + T L LD
Sbjct: 257 TTLHCIQTDLLE---IDLTHNTQLIYFQAEGCRKIKEL--DVTHNTQLYLLDCQAAGI-T 310
Query: 128 PIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPV 187
+ + L +L L++ L L + L +L+ + G P
Sbjct: 311 ELD--LSQNPKLVYLYLNNTELT-ELD--VSHNTKLK-SLSCVNAHIQ-DFSSV-GKIPA 362
Query: 188 MVSLDLRNNNLSGEIPQVGSLLN 210
+ + + + +
Sbjct: 363 LNNNFEAEGQTITMPKETLTNNS 385
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 59.7 bits (145), Expect = 1e-09
Identities = 28/132 (21%), Positives = 44/132 (33%), Gaps = 15/132 (11%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG 127
T L LT ++ LT L N + + T L LD + N
Sbjct: 130 TYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKLD--VTPQTQLTTLDCSFNKITE 184
Query: 128 PIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPV 187
+ + K L L+ +N + L L LT L+ S N+ + +I
Sbjct: 185 -LD--VSQNKLLNRLNCDTNNIT-KLD--LNQNIQLT-FLDCSSNKLT-EIDV--TPLTQ 234
Query: 188 MVSLDLRNNNLS 199
+ D N L+
Sbjct: 235 LTYFDCSVNPLT 246
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 58.5 bits (142), Expect = 3e-09
Identities = 25/143 (17%), Positives = 47/143 (32%), Gaps = 16/143 (11%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG 127
T LT ++ L+ LT L + + +L + T L+Y
Sbjct: 236 TYFDCSVNPLTEL---DVSTLSKLTTLHCIQTDLLE---IDLTHNTQLIYFQAEGCRKIK 289
Query: 128 PIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPV 187
+ + L LD + + L L L L L+ + + ++ H
Sbjct: 290 ELD--VTHNTQLYLLDCQAAGIT-ELD--LSQNPKLV-YLYLNNTELT-ELD--VSHNTK 340
Query: 188 MVSLDLRNNNLSGEIPQVGSLLN 210
+ SL N ++ + VG +
Sbjct: 341 LKSLSCVNAHIQ-DFSSVGKIPA 362
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 55.5 bits (134), Expect = 2e-08
Identities = 28/132 (21%), Positives = 50/132 (37%), Gaps = 15/132 (11%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG 127
T L + N+T +L +LT L+ SN + L T L YL+ N
Sbjct: 67 TKLICTSNNITTL---DLSQNTNLTYLACDSNKLTNLDVTPL---TKLTYLNCDTNKL-T 119
Query: 128 PIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPV 187
+ + LT+L+ + N L + + LT L+ N+ ++
Sbjct: 120 KLD--VSQNPLLTYLNCARNTLT-EID--VSHNTQLT-ELDCHLNKKITKLDV--TPQTQ 171
Query: 188 MVSLDLRNNNLS 199
+ +LD N ++
Sbjct: 172 LTTLDCSFNKIT 183
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 4e-04
Identities = 25/178 (14%), Positives = 46/178 (25%), Gaps = 35/178 (19%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG 127
L +T +L L L L + ++ + + + T L L +
Sbjct: 300 YLLDCQAAGIT---ELDLSQNPKLVYLYLNNTELTE-LDVS--HNTKLKSLSCVNAHIQD 353
Query: 128 PIPDRIKTLKNLTHLDLSSN-------------LLNGSLPEFLLDLRALTGTLNLSFNQF 174
+ + L + + L ++ LLD +
Sbjct: 354 -FSS-VGKIPALNNNFEAEGQTITMPKETLTNNSLTIAVSPDLLDQFGNPMNIEPGDGGV 411
Query: 175 SGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGLCGFPLQSPCP 232
Q + + NLS + P V A G P ++P P
Sbjct: 412 YDQA-----------TNTITWENLSTDNPAVTYTFTSENGAIVGTV---TTPFEAPQP 455
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 64.7 bits (158), Expect = 2e-11
Identities = 53/262 (20%), Positives = 92/262 (35%), Gaps = 83/262 (31%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
VA++ L G + +DF E + + HPNI+RL+ + +++++++ NGSL
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 433 YAALHG---------------------------------------------------FGL 441
+ L FGL
Sbjct: 134 DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 193
Query: 442 NRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEI 501
R+L + + G +I + +PEA Y KFT DV+S+GIVL E+
Sbjct: 194 GRVL------EDDPEAAYTTRGGKIPI---RWTSPEAIAYR-KFTSASDVWSYGIVLWEV 243
Query: 502 LT-GRLPDAGPENDGKGLE--SLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIAL 558
++ G P N + V + +R P ++ + L
Sbjct: 244 MSYGERPYWEMSNQ----DVIKAVDEGYRLPPP------MDCPAALY---------QLML 284
Query: 559 NCTELDPEFRPRMRTVSESLDR 580
+C + D RP+ + LD+
Sbjct: 285 DCWQKDRNNRPKFEQIVSILDK 306
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 65.6 bits (160), Expect = 2e-11
Identities = 45/262 (17%), Positives = 80/262 (30%), Gaps = 80/262 (30%)
Query: 370 GAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRL------------------- 410
VA++ + + F E + + HP+IV+L
Sbjct: 416 NPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLG 475
Query: 411 --KAFYYANDEKLLISDFI-------------------------RN----GSLYAALHGF 439
++F L ++ I RN + L F
Sbjct: 476 ELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDF 535
Query: 440 GLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLL 499
GL+R + ++ + ++ ++APE+ + +FT DV+ FG+ +
Sbjct: 536 GLSRYM--------EDSTYYKASKGKLPI---KWMAPESINFR-RFTSASDVWMFGVCMW 583
Query: 500 EILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIAL 558
EIL G P G +N + + R P P ++ +
Sbjct: 584 EILMHGVKPFQGVKN--NDVIGRIENGERLPMP------PNCPPTLY---------SLMT 626
Query: 559 NCTELDPEFRPRMRTVSESLDR 580
C DP RPR + L
Sbjct: 627 KCWAYDPSRRPRFTELKAQLST 648
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 63.8 bits (156), Expect = 2e-11
Identities = 38/143 (26%), Positives = 55/143 (38%), Gaps = 23/143 (16%)
Query: 88 LNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNSFCG-PIPDRIKTLKNLTHLDLS 145
L+SL +L N + + + L L++AHN +P+ L NL HLDLS
Sbjct: 99 LSSLQKLVAVETNLAS-LENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLS 157
Query: 146 SNLLNGSLPEFLLD----LRALTGTLNLSFNQFSGQIPEMYGHFPVM--VSLDLRNNNLS 199
SN + S+ L + L +L+LS N + I G F + L L N L
Sbjct: 158 SNKIQ-SIYCTDLRVLHQMPLLNLSLDLSLNPMN-FIQP--GAFKEIRLKELALDTNQLK 213
Query: 200 GEIPQVGSLLNQGPTAFSGNPGL 222
+P F L
Sbjct: 214 -SVP---------DGIFDRLTSL 226
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 2e-09
Identities = 31/152 (20%), Positives = 50/152 (32%), Gaps = 19/152 (12%)
Query: 74 NRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNSFCGPIPDR 132
N +P L S L L+ N + + F + L LDL+ I D
Sbjct: 16 ELNFYK-IPD--NLPFSTKNLDLSFNPLRH-LGSYSFFSFPELQVLDLSRCEI-QTIEDG 70
Query: 133 I-KTLKNLTHLDLSSNLLNGSLPEFLLD-LRALTGTLNLSFNQFSGQIPEMYGHFPVMVS 190
++L +L+ L L+ N + SL L +L L + GH +
Sbjct: 71 AYQSLSHLSTLILTGNPIQ-SLALGAFSGLSSLQ-KLVAVETNLASLENFPIGHLKTLKE 128
Query: 191 LDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGL 222
L++ +N + FS L
Sbjct: 129 LNVAHNLIQ-SFKLPE--------YFSNLTNL 151
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 3e-08
Identities = 33/135 (24%), Positives = 47/135 (34%), Gaps = 9/135 (6%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNSFC 126
L NL +G L +L L++A N F N TNL +LDL+ N
Sbjct: 103 QKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI- 161
Query: 127 GPIPDRI-KTLKNLT----HLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEM 181
I + L + LDLS N +N + L L L NQ +
Sbjct: 162 QSIYCTDLRVLHQMPLLNLSLDLSLNPMN-FIQPGAFKEIRLK-ELALDTNQLKSVPDGI 219
Query: 182 YGHFPVMVSLDLRNN 196
+ + + L N
Sbjct: 220 FDRLTSLQKIWLHTN 234
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 3e-11
Identities = 33/144 (22%), Positives = 55/144 (38%), Gaps = 12/144 (8%)
Query: 67 VTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFC 126
+ N+T L+ +T LS + I + NL+ L+L N
Sbjct: 21 AIKIAAGKSNVTD--TVTQADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQIT 76
Query: 127 GPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFP 186
P +K L +T L+LS N L + L+++ TL+L+ Q + P
Sbjct: 77 DLAP--LKNLTKITELELSGNPLKN--VSAIAGLQSIK-TLDLTSTQITDVTPL--AGLS 129
Query: 187 VMVSLDLRNNNLSGEIPQVGSLLN 210
+ L L N ++ I + L N
Sbjct: 130 NLQVLYLDLNQIT-NISPLAGLTN 152
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 2e-09
Identities = 38/143 (26%), Positives = 60/143 (41%), Gaps = 12/143 (8%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG 127
T L L L S + L S+ L L S + P L +NL L L N
Sbjct: 88 TELELSGNPLK--NVSAIAGLQSIKTLDLTSTQITDVTP--LAGLSNLQVLYLDLNQITN 143
Query: 128 PIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPV 187
P + L NL +L + + ++ L L +L LT TL N+ S I + P
Sbjct: 144 ISP--LAGLTNLQYLSIGNAQVS-DL-TPLANLSKLT-TLKADDNKIS-DISPL-ASLPN 196
Query: 188 MVSLDLRNNNLSGEIPQVGSLLN 210
++ + L+NN +S ++ + + N
Sbjct: 197 LIEVHLKNNQIS-DVSPLANTSN 218
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 49.7 bits (119), Expect = 1e-06
Identities = 16/103 (15%), Positives = 35/103 (33%), Gaps = 8/103 (7%)
Query: 108 NLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTL 167
N + + ++ + L +T L + ++ E + L L L
Sbjct: 14 PDPALANAIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGVT-TI-EGVQYLNNLI-GL 68
Query: 168 NLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLN 210
L NQ + + + + + L+L N L + + L +
Sbjct: 69 ELKDNQIT-DLAPL-KNLTKITELELSGNPLK-NVSAIAGLQS 108
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 1e-06
Identities = 21/108 (19%), Positives = 38/108 (35%), Gaps = 6/108 (5%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG 127
L + N ++ + L L+ LT L N S I L + NL+ + L +N
Sbjct: 154 QYLSIGNAQVSDL--TPLANLSKLTTLKADDNKISD-IS-PLASLPNLIEVHLKNNQISD 209
Query: 128 PIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFS 175
P + NL + L++ + + +L S +
Sbjct: 210 VSP--LANTSNLFIVTLTNQTITNQPVFYNNNLVVPNVVKGPSGAPIA 255
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 63.4 bits (155), Expect = 3e-11
Identities = 45/265 (16%), Positives = 82/265 (30%), Gaps = 86/265 (32%)
Query: 370 GAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRL------------------- 410
VA++ + + F E + + HP+IV+L
Sbjct: 41 NPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLG 100
Query: 411 --KAFYYANDEKLLISDFI-------------------------RN----GSLYAALHGF 439
++F L ++ I RN + L F
Sbjct: 101 ELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDF 160
Query: 440 GLNRLLPGTSKVTKNETIVTSGTGSRISAISNV-YLAPEARIYGSKFTQKCDVYSFGIVL 498
GL+R + ++ + ++ + ++APE+ + +FT DV+ FG+ +
Sbjct: 161 GLSRYM--------EDSTYYKASKGKLP----IKWMAPESINFR-RFTSASDVWMFGVCM 207
Query: 499 LEILT-GRLPDAGPENDGKGLE--SLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFH 555
EIL G P G +N+ + + R P P ++
Sbjct: 208 WEILMHGVKPFQGVKNN----DVIGRIENGERLPMP------PNCPPTLY---------S 248
Query: 556 IALNCTELDPEFRPRMRTVSESLDR 580
+ C DP RPR + L
Sbjct: 249 LMTKCWAYDPSRRPRFTELKAQLST 273
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 63.8 bits (156), Expect = 3e-11
Identities = 48/275 (17%), Positives = 84/275 (30%), Gaps = 86/275 (31%)
Query: 361 VVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARVQHPNIVRLKAFYYA--- 416
V G VAV+ L + + +E + ++ +P IVR+
Sbjct: 33 VKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM----IGICE 88
Query: 417 NDEKLLISDFIRNGSL---------------------------YAALHGF---------- 439
+ +L+ + G L Y F
Sbjct: 89 AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNV 148
Query: 440 -------------GLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFT 486
GL++ L +E + T + + + APE Y KF+
Sbjct: 149 LLVTQHYAKISDFGLSKALR------ADENYYKAQTHGKWP-VK--WYAPECINYY-KFS 198
Query: 487 QKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIH 545
K DV+SFG+++ E + G+ P G + + +++ K R P +E++
Sbjct: 199 SKSDVWSFGVLMWEAFSYGQKPYRGMKG--SEVTAMLEKGERMGCP------AGCPREMY 250
Query: 546 AKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580
+ C D E RP V L
Sbjct: 251 D---------LMNLCWTYDVENRPGFAAVELRLRN 276
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 64.0 bits (156), Expect = 3e-11
Identities = 42/203 (20%), Positives = 70/203 (34%), Gaps = 68/203 (33%)
Query: 373 TVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYA-------NDEKLLIS 424
VAV+ + + +W E+E+ ++H NI+ F A + L+S
Sbjct: 66 EEVAVKIFSSREERSWFR---EAEIYQTVMLRHENILG---FIAADNKDNGTWTQLWLVS 119
Query: 425 DFIRNGSLYAALHG----------------FGLNRL---LPGT------------SK--- 450
D+ +GSL+ L+ GL L + GT SK
Sbjct: 120 DYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNIL 179
Query: 451 VTKNETIV-----------TSGTGSRISAISNV----YLAPE-----ARIYGSKFTQKCD 490
V KN T ++ I+ V Y+APE + + ++ D
Sbjct: 180 VKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRAD 239
Query: 491 VYSFGIVLLEILTGRLPDAGPEN 513
+Y+ G+V EI E+
Sbjct: 240 IYAMGLVFWEIARRCSIGGIHED 262
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 64.1 bits (156), Expect = 4e-11
Identities = 45/162 (27%), Positives = 59/162 (36%), Gaps = 27/162 (16%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF--NATNLVYLDLAHNSF 125
L + L +P L + L L+ NN S+ + A TNL L L+HN
Sbjct: 21 NILSCSKQQLPN-VPQ--SLPSYTALLDLSHNNLSR-LRAEWTPTRLTNLHSLLLSHNHL 76
Query: 126 CGPIPDRI-KTLKNLTHLDLSSNLLNGSLPEFLLD-LRALTGTLNLSFNQFSGQIPEMYG 183
I + NL +LDLSSN L+ +L EFL L+AL L L N +
Sbjct: 77 -NFISSEAFVPVPNLRYLDLSSNHLH-TLDEFLFSDLQALE-VLLLYNNHIV-VVDR--N 130
Query: 184 HFPVMVSL---DLRNNNLSGEIPQVGSLLNQGPTAFSGNPGL 222
F M L L N +S P L
Sbjct: 131 AFEDMAQLQKLYLSQNQIS-RFP---------VELIKDGNKL 162
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 56.4 bits (136), Expect = 1e-08
Identities = 33/137 (24%), Positives = 51/137 (37%), Gaps = 11/137 (8%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNSFC 126
SL L + +L + +L L L+SN+ + LF + L L L +N
Sbjct: 67 HSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHT-LDEFLFSDLQALEVLLLYNNHIV 125
Query: 127 GPIPDRI-KTLKNLTHLDLSSNLLNGSLPEFLLD----LRALTGTLNLSFNQFSGQIPEM 181
+ + + L L LS N ++ P L+ L L L+LS N+
Sbjct: 126 V-VDRNAFEDMAQLQKLYLSQNQIS-RFPVELIKDGNKLPKLM-LLDLSSNKLKKLPLTD 182
Query: 182 YGHFPVMVSLDLR-NNN 197
P V L +NN
Sbjct: 183 LQKLPAWVKNGLYLHNN 199
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 46.8 bits (111), Expect = 1e-05
Identities = 27/93 (29%), Positives = 34/93 (36%), Gaps = 8/93 (8%)
Query: 88 LNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNSFCGPIPDRI----KTLKNLTHL 142
L +L L L +N+ + N F + L L L+ N P + L L L
Sbjct: 111 LQALEVLLLYNNHIVV-VDRNAFEDMAQLQKLYLSQNQI-SRFPVELIKDGNKLPKLMLL 168
Query: 143 DLSSNLLNGSLPEFLLDLRALT-GTLNLSFNQF 174
DLSSN L L L A L L N
Sbjct: 169 DLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPL 201
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 6e-11
Identities = 42/138 (30%), Positives = 56/138 (40%), Gaps = 13/138 (9%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNA-TNLVYLDLAHNSFC 126
L L + L+ L L L L N +PA +F NL L + N
Sbjct: 40 KKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQT-LPAGIFKELKNLETLWVTDNKLQ 98
Query: 127 GPIPDRIKT-LKNLTHLDLSSNLLNGSLPEFLLD-LRALTGTLNLSFNQFSGQIPEMYGH 184
+P + L NL L L N L SLP + D L LT L+L +N+ +P+ G
Sbjct: 99 A-LPIGVFDQLVNLAELRLDRNQLK-SLPPRVFDSLTKLT-YLSLGYNELQ-SLPK--GV 152
Query: 185 FPVMVSL---DLRNNNLS 199
F + SL L NN L
Sbjct: 153 FDKLTSLKELRLYNNQLK 170
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 60.0 bits (146), Expect = 3e-10
Identities = 39/135 (28%), Positives = 55/135 (40%), Gaps = 7/135 (5%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNA-TNLVYLDLAHNSFC 126
LYL + L L +L L + N +P +F+ NL L L N
Sbjct: 64 RLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQA-LPIGVFDQLVNLAELRLDRNQL- 121
Query: 127 GPIPDRI-KTLKNLTHLDLSSNLLNGSLPEFLLD-LRALTGTLNLSFNQFSGQIPEMYGH 184
+P R+ +L LT+L L N L SLP+ + D L +L L L NQ +
Sbjct: 122 KSLPPRVFDSLTKLTYLSLGYNELQ-SLPKGVFDKLTSLK-ELRLYNNQLKRVPEGAFDK 179
Query: 185 FPVMVSLDLRNNNLS 199
+ +L L NN L
Sbjct: 180 LTELKTLKLDNNQLK 194
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 1e-05
Identities = 33/108 (30%), Positives = 42/108 (38%), Gaps = 7/108 (6%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNA-TNLVYLDLAHNSFC 126
L L L P L LT LSL N +P +F+ T+L L L +N
Sbjct: 112 AELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQS-LPKGVFDKLTSLKELRLYNNQL- 169
Query: 127 GPIPDRI-KTLKNLTHLDLSSNLLNGSLPEFLLD-LRALTGTLNLSFN 172
+P+ L L L L +N L +PE D L L L L N
Sbjct: 170 KRVPEGAFDKLTELKTLKLDNNQLK-RVPEGAFDSLEKLK-MLQLQEN 215
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 7e-11
Identities = 55/266 (20%), Positives = 92/266 (34%), Gaps = 91/266 (34%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
VA++ L G + +DF SE + + HPNI+RL+ +++++++ NGSL
Sbjct: 78 VPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL 137
Query: 433 ----------------------------YAALHGF-----------------------GL 441
Y + G+ GL
Sbjct: 138 DTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGL 197
Query: 442 NRLLPGTSKVTKNETIVTSGTGSRI----SAISNVYLAPEARIYGSKFTQKCDVYSFGIV 497
+R+ + + + TG +I +A PEA + F+ DV+SFG+V
Sbjct: 198 SRV------LEDDPDAAYTTTGGKIPIRWTA-------PEAIAFR-TFSSASDVWSFGVV 243
Query: 498 LLEILT-GRLPDAGPENDGKGLE--SLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATF 554
+ E+L G P N + S V + +R P +H
Sbjct: 244 MWEVLAYGERPYWNMTNR----DVISSVEEGYRLPAP------MGCPHALH--------- 284
Query: 555 HIALNCTELDPEFRPRMRTVSESLDR 580
+ L+C D RPR + LD
Sbjct: 285 QLMLDCWHKDRAQRPRFSQIVSVLDA 310
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 9e-11
Identities = 36/134 (26%), Positives = 52/134 (38%), Gaps = 13/134 (9%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNA-TNLVYLDLAHNSFC 126
+L L + L +P L +LT L ++ N + +P L L L N
Sbjct: 80 GTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTS-LPLGALRGLGELQELYLKGNEL- 136
Query: 127 GPIPDRI-KTLKNLTHLDLSSNLLNGSLPEFLLD-LRALTGTLNLSFNQFSGQIPEMYGH 184
+P + L L L++N L LP LL+ L L TL L N IP+ G
Sbjct: 137 KTLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLD-TLLLQENSLYT-IPK--GF 191
Query: 185 F--PVMVSLDLRNN 196
F ++ L N
Sbjct: 192 FGSHLLPFAFLHGN 205
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 60.9 bits (148), Expect = 2e-10
Identities = 39/137 (28%), Positives = 51/137 (37%), Gaps = 17/137 (12%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNSFC 126
+ RNLT +P L T L L+ N T L L+L
Sbjct: 13 LEVNCDKRNLTA-LPP--DLPKDTTILHLSENLLYT-FSLATLMPYTRLTQLNLDRAELT 68
Query: 127 G-PIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHF 185
+ L L LDLS N L SLP L ALT L++SFN+ + +P G
Sbjct: 69 KLQVDGT---LPVLGTLDLSHNQLQ-SLPLLGQTLPALT-VLDVSFNRLT-SLPL--GAL 120
Query: 186 PVMVS---LDLRNNNLS 199
+ L L+ N L
Sbjct: 121 RGLGELQELYLKGNELK 137
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 61.4 bits (150), Expect = 1e-10
Identities = 47/268 (17%), Positives = 83/268 (30%), Gaps = 92/268 (34%)
Query: 370 GAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYA---NDEKLLISDF 426
G VAV+ + + F SE + + HP+IV+L + +I +
Sbjct: 38 GEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL----IGIIEEEPTWIIMEL 93
Query: 427 IRNGSLYAALHG------------------------------------------------ 438
G L L
Sbjct: 94 YPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVK 153
Query: 439 ---FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFG 495
FGL+R + + + +R+ I +++PE+ + +FT DV+ F
Sbjct: 154 LGDFGLSRYI--------EDEDYYKASVTRL-PIK--WMSPESINFR-RFTTASDVWMFA 201
Query: 496 IVLLEILT-GRLPDAGPENDGKGLE--SLVRKAFRERRPLSEVIDPALVKEIHAKRQVLA 552
+ + EIL+ G+ P EN + ++ K R +P ++
Sbjct: 202 VCMWEILSFGKQPFFWLENK----DVIGVLEKGDRLPKP------DLCPPVLY------- 244
Query: 553 TFHIALNCTELDPEFRPRMRTVSESLDR 580
+ C + DP RPR + SL
Sbjct: 245 --TLMTRCWDYDPSDRPRFTELVCSLSD 270
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 61.5 bits (150), Expect = 1e-10
Identities = 51/268 (19%), Positives = 92/268 (34%), Gaps = 76/268 (28%)
Query: 362 VVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKL 421
V G VAV+ L E ++F E + ++HPN+V+L
Sbjct: 28 EVYEGVWKKYSLTVAVKTLKED-TMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 85
Query: 422 LISDFIRNGSLYAALHGFGLNRL----------------------------------LPG 447
+I++F+ G+L L + L G
Sbjct: 86 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 145
Query: 448 TSKVTK----------NETIVTSGTGSRI----SAISNVYLAPEARIYGSKFTQKCDVYS 493
+ + K T+ G++ +A PE+ Y KF+ K DV++
Sbjct: 146 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA-------PESLAYN-KFSIKSDVWA 197
Query: 494 FGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLA 552
FG++L EI T G P G + + L+ K +R RP ++++
Sbjct: 198 FGVLLWEIATYGMSPYPGIDL--SQVYELLEKDYRMERP------EGCPEKVY------- 242
Query: 553 TFHIALNCTELDPEFRPRMRTVSESLDR 580
+ C + +P RP + ++ +
Sbjct: 243 --ELMRACWQWNPSDRPSFAEIHQAFET 268
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 3e-10
Identities = 55/271 (20%), Positives = 86/271 (31%), Gaps = 85/271 (31%)
Query: 365 RGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR--------------- 409
+ S VA++ L G + DF E + + H NI+R
Sbjct: 66 KTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIIT 125
Query: 410 -------LKAFYYANDEKLLISDFIR------NGSLYAALHG------------------ 438
L F D + + + G Y A
Sbjct: 126 EYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLV 185
Query: 439 -----FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNV-YLAPEARIYGSKFTQKCDVY 492
FGL+R+L + + +G +I + + APEA Y KFT DV+
Sbjct: 186 CKVSDFGLSRVL------EDDPEATYTTSGGKIP----IRWTAPEAISYR-KFTSASDVW 234
Query: 493 SFGIVLLEILT-GRLPDAGPENDGKGLE--SLVRKAFRERRPLSEVIDPALVKEIHAKRQ 549
SFGIV+ E++T G P N E + FR P I+
Sbjct: 235 SFGIVMWEVMTYGERPYWELSNH----EVMKAINDGFRLPTP------MDCPSAIY---- 280
Query: 550 VLATFHIALNCTELDPEFRPRMRTVSESLDR 580
+ + C + + RP+ + LD+
Sbjct: 281 -----QLMMQCWQQERARRPKFADIVSILDK 306
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 61.0 bits (148), Expect = 4e-10
Identities = 27/140 (19%), Positives = 46/140 (32%), Gaps = 10/140 (7%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNSFC 126
+T +PS L + L I F +L ++++ N
Sbjct: 12 RVFLCQESKVT-EIPS--DLPRNAIELRFVLTKLRV-IQKGAFSGFGDLEKIEISQNDVL 67
Query: 127 GPIPDRI-KTLKNLTHLDLS-SNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPE-MYG 183
I + L L + + +N L PE +L L L +S +P+
Sbjct: 68 EVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQ-YLLISNTGIK-HLPDVHKI 125
Query: 184 HFPVMVSLDLRNNNLSGEIP 203
H V LD+++N I
Sbjct: 126 HSLQKVLLDIQDNINIHTIE 145
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 52.1 bits (125), Expect = 2e-07
Identities = 25/113 (22%), Positives = 46/113 (40%), Gaps = 9/113 (7%)
Query: 86 GLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRI-KTLKNLTHLDL 144
GL L L N + I + FN T L L+L+ N+ +P+ + LD+
Sbjct: 151 GLSFESVILWLNKNGIQE-IHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDI 209
Query: 145 SSNLLNGSLPEFLLD-LRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNN 196
S ++ SLP + L+ L+ L + + ++P + ++ L
Sbjct: 210 SRTRIH-SLPSYGLENLKKLR-ARSTYNLK---KLPTLE-KLVALMEASLTYP 256
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 59.5 bits (145), Expect = 5e-10
Identities = 47/259 (18%), Positives = 87/259 (33%), Gaps = 83/259 (32%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
VAV+ + EG + +F E + + ++ HP +V+ +++++I NG L
Sbjct: 33 YDVAVKMIKEGSMS--EDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCL 90
Query: 433 YAALHG---------------------------------------------------FGL 441
L FG+
Sbjct: 91 LNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGM 150
Query: 442 NRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEI 501
R + + S G++ + + APE Y K++ K DV++FGI++ E+
Sbjct: 151 TRYV--------LDDQYVSSVGTKF-PVK--WSAPEVFHYF-KYSSKSDVWAFGILMWEV 198
Query: 502 LT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNC 560
+ G++P N + V + R RP I+ I +C
Sbjct: 199 FSLGKMPYDLYTN--SEVVLKVSQGHRLYRP------HLASDTIY---------QIMYSC 241
Query: 561 TELDPEFRPRMRTVSESLD 579
PE RP + + S++
Sbjct: 242 WHELPEKRPTFQQLLSSIE 260
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 59.5 bits (145), Expect = 6e-10
Identities = 44/265 (16%), Positives = 86/265 (32%), Gaps = 91/265 (34%)
Query: 372 PTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGS 431
VA++ + EG + +F E + + + H +V+L +I++++ NG
Sbjct: 48 QYDVAIKMIKEG-SMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGC 105
Query: 432 LYAALHG---------------------------------------------------FG 440
L L FG
Sbjct: 106 LLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG 165
Query: 441 LNRLLPGTSKVTKNETIVTSGTGSRI----SAISNVYLAPEARIYGSKFTQKCDVYSFGI 496
L+R + + TS GS+ S PE +Y KF+ K D+++FG+
Sbjct: 166 LSRYV--------LDDEYTSSVGSKFPVRWSP-------PEVLMYS-KFSSKSDIWAFGV 209
Query: 497 VLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFH 555
++ EI + G++P N + + R RP ++++
Sbjct: 210 LMWEIYSLGKMPYERFTN--SETAEHIAQGLRLYRP------HLASEKVY---------T 252
Query: 556 IALNCTELDPEFRPRMRTVSESLDR 580
I +C + RP + + ++
Sbjct: 253 IMYSCWHEKADERPTFKILLSNILD 277
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 60.7 bits (147), Expect = 6e-10
Identities = 35/149 (23%), Positives = 59/149 (39%), Gaps = 14/149 (9%)
Query: 55 CHWSGIHCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATN 114
S + + NRNLT ++P L LSL+ N+ S+ ++ +
Sbjct: 21 IVGSMTPFSNELESMVDYSNRNLT-HVPK--DLPPRTKALSLSQNSISELRMPDISFLSE 77
Query: 115 LVYLDLAHNSFCGPIPDRI-KTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQ 173
L L L+HN + + ++L +LD+S N L ++ + +L L+LSFN
Sbjct: 78 LRVLRLSHNRI-RSLDFHVFLFNQDLEYLDVSHNRL-QNISCCPMA--SLR-HLDLSFND 132
Query: 174 FSGQIPEMYGHFPVMVSL---DLRNNNLS 199
F +P F + L L
Sbjct: 133 FD-VLPV-CKEFGNLTKLTFLGLSAAKFR 159
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 57.2 bits (138), Expect = 8e-09
Identities = 32/153 (20%), Positives = 50/153 (32%), Gaps = 13/153 (8%)
Query: 58 SGIHCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVY 117
++ + + L + +S T L+ N F+ + L
Sbjct: 322 EALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQT 381
Query: 118 LDLAHNSF--CGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFS 175
L L N + K + +L LD+S N LN + LNLS N +
Sbjct: 382 LILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLT 441
Query: 176 GQIPEMYGHFPVMVS----LDLRNNNLSGEIPQ 204
G F + LDL NN + IP+
Sbjct: 442 G------SVFRCLPPKVKVLDLHNNRIM-SIPK 467
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 56.8 bits (137), Expect = 1e-08
Identities = 26/113 (23%), Positives = 36/113 (31%), Gaps = 5/113 (4%)
Query: 88 LNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSF-CGPIPDRIKTLKNLTHLDLSS 146
L L ++ N I +L +LDL+ N F P+ L LT L LS+
Sbjct: 99 NQDLEYLDVSHNRLQN-ISCCPM--ASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSA 155
Query: 147 NLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMV-SLDLRNNNL 198
+ L L+L G E V L N+L
Sbjct: 156 AKFRQLDLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSL 208
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 53.0 bits (127), Expect = 2e-07
Identities = 29/133 (21%), Positives = 54/133 (40%), Gaps = 14/133 (10%)
Query: 44 LDSWSESDSTPCHWSGIHCIRNRVTSL-YLPNRNLTGYMPSELGLLNSLTRLSLASNNFS 102
L ++ + + S + + + SL S+ L+L+SN +
Sbjct: 389 LKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCA-------WAESILVLNLSSNMLT 441
Query: 103 KPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLD-LR 161
+ L + LDL +N IP + L+ L L+++SN L S+P+ + D L
Sbjct: 442 GSVFRCL--PPKVKVLDLHNNRIMS-IPKDVTHLQALQELNVASNQLK-SVPDGVFDRLT 497
Query: 162 ALTGTLNLSFNQF 174
+L + L N +
Sbjct: 498 SLQ-YIWLHDNPW 509
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 42.6 bits (100), Expect = 3e-04
Identities = 20/158 (12%), Positives = 47/158 (29%), Gaps = 10/158 (6%)
Query: 62 CIRNRVTSLYLPNRNLTGYMPSELGLL---NSLTRLSLASNNFSKPIPANLFNATN---- 114
+ ++ L + T +L + L++ + ++ I F +
Sbjct: 246 TRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALK 305
Query: 115 -LVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQ 173
L+ + + F + LS + + T LN + N
Sbjct: 306 SLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFT-FLNFTQNV 364
Query: 174 FSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQ 211
F+ + + + +L L+ N L +V +
Sbjct: 365 FTDSVFQGCSTLKRLQTLILQRNGLK-NFFKVALMTKN 401
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 60.2 bits (146), Expect = 6e-10
Identities = 47/266 (17%), Positives = 78/266 (29%), Gaps = 81/266 (30%)
Query: 370 GAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR-------------------- 409
G AV+ L F +E + HPN++
Sbjct: 115 GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK 174
Query: 410 ---LKAFYYANDEKLLISDFIR------NGSLYAALHG---------------------- 438
L+ F + D I G + A
Sbjct: 175 HGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVA 234
Query: 439 -FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNV-YLAPEARIYGSKFTQKCDVYSFGI 496
FGL R + K V + TG+++ V ++A E+ KFT K DV+SFG+
Sbjct: 235 DFGLARDM-----YDKEFDSVHNKTGAKLP----VKWMALESLQTQ-KFTTKSDVWSFGV 284
Query: 497 VLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFH 555
+L E++T G P + + + R +P ++
Sbjct: 285 LLWELMTRGAPPYPDVNT--FDITVYLLQGRRLLQP------EYCPDPLY---------E 327
Query: 556 IALNCTELDPEFRPRMRTVSESLDRV 581
+ L C E RP + + +
Sbjct: 328 VMLKCWHPKAEMRPSFSELVSRISAI 353
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 59.3 bits (144), Expect = 6e-10
Identities = 32/146 (21%), Positives = 51/146 (34%), Gaps = 17/146 (11%)
Query: 67 VTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFC 126
L +++T L+ + + ++N + + TNL L L+HN
Sbjct: 21 AVKQNLGKQSVTDL--VSQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQ-- 74
Query: 127 GPIPD--RIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGH 184
I D +K L L L ++ N L L L L N+ + H
Sbjct: 75 --ISDLSPLKDLTKLEELSVNRNRLKNLNGIPSACLS----RLFLDNNELR-DTDSL-IH 126
Query: 185 FPVMVSLDLRNNNLSGEIPQVGSLLN 210
+ L +RNN L I +G L
Sbjct: 127 LKNLEILSIRNNKLK-SIVMLGFLSK 151
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 7e-06
Identities = 22/103 (21%), Positives = 36/103 (34%), Gaps = 6/103 (5%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG 127
+ L+L N L L L +L LS+ +N I L + L LDL N
Sbjct: 109 SRLFLDNNELRD--TDSLIHLKNLEILSIRNNKLKS-IV-MLGFLSKLEVLDLHGNEITN 164
Query: 128 PIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLS 170
+ LK + +DL+ ++ +L +
Sbjct: 165 TGG--LTRLKKVNWIDLTGQKCVNEPVKYQPELYITNTVKDPD 205
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 6e-05
Identities = 18/94 (19%), Positives = 32/94 (34%), Gaps = 11/94 (11%)
Query: 108 NLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTL 167
N V +L S + K L + + + ++ + SL + L L
Sbjct: 14 PDPGLANAVKQNLGKQSVTDLVS--QKELSGVQNFNGDNSNIQ-SL-AGMQFFTNLK-EL 68
Query: 168 NLSFNQFSGQIPEMYG--HFPVMVSLDLRNNNLS 199
+LS N QI ++ + L + N L
Sbjct: 69 HLSHN----QISDLSPLKDLTKLEELSVNRNRLK 98
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 58.8 bits (143), Expect = 1e-09
Identities = 51/302 (16%), Positives = 92/302 (30%), Gaps = 92/302 (30%)
Query: 345 ASAYVVGKSKNGIMYKVVVGRGS-GM----------GAPTVVAVRRLTEGDATWRFKDFE 393
++ + V+G+G G+ A++ L+ + + F
Sbjct: 11 VKDVLIPHERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFL 70
Query: 394 SEVEAIARVQHPNIVR-----------------------LKAFYYANDEKLLISDFIR-- 428
E + + HPN++ L F + + D I
Sbjct: 71 REGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFG 130
Query: 429 ----NGSLYAALHG-----------------------FGLNRLLPGTSKVTKNETIVTSG 461
G Y A FGL R + + + V
Sbjct: 131 LQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDI-----LDREYYSVQQH 185
Query: 462 TGSRISAISNV-YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLE 519
+R+ V + A E+ +FT K DV+SFG++L E+LT G P + L
Sbjct: 186 RHARLP----VKWTALESLQTY-RFTTKSDVWSFGVLLWELLTRGAPPYRHIDP--FDLT 238
Query: 520 SLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579
+ + R +P ++ + C E DP RP R + ++
Sbjct: 239 HFLAQGRRLPQP------EYCPDSLY---------QVMQQCWEADPAVRPTFRVLVGEVE 283
Query: 580 RV 581
++
Sbjct: 284 QI 285
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 1e-09
Identities = 28/116 (24%), Positives = 48/116 (41%), Gaps = 13/116 (11%)
Query: 90 SLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNSFCGPIPDRI-KTLKNLTHLDLSSN 147
++T + L N IP F L +DL++N + + L++L L L N
Sbjct: 33 TITEIRLEQNTIKV-IPPGAFSPYKKLRRIDLSNNQI-SELAPDAFQGLRSLNSLVLYGN 90
Query: 148 LLNGSLPEFLLD-LRALTGTLNLSFNQFSGQIPEMYGHF---PVMVSLDLRNNNLS 199
+ LP+ L + L +L L L+ N+ + + F + L L +N L
Sbjct: 91 KIT-ELPKSLFEGLFSLQ-LLLLNANKIN-CLRV--DAFQDLHNLNLLSLYDNKLQ 141
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 6e-07
Identities = 30/113 (26%), Positives = 47/113 (41%), Gaps = 7/113 (6%)
Query: 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHN 123
++ + L N ++ P L SL L L N +P +LF +L L L N
Sbjct: 56 KKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKI-TELPKSLFEGLFSLQLLLLNAN 114
Query: 124 SFCGPIPDRI-KTLKNLTHLDLSSNLLNGSLPEFLLD-LRALTGTLNLSFNQF 174
+ + L NL L L N L ++ + LRA+ T++L+ N F
Sbjct: 115 KI-NCLRVDAFQDLHNLNLLSLYDNKLQ-TIAKGTFSPLRAIQ-TMHLAQNPF 164
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 1e-09
Identities = 42/137 (30%), Positives = 55/137 (40%), Gaps = 13/137 (9%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNA-TNLVYLDLAHNSFC 126
L L + L + L LT L+L N + A +F+ T L L LA+N
Sbjct: 38 EKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQT-LSAGVFDDLTELGTLGLANNQL- 95
Query: 127 GPIPDRI-KTLKNLTHLDLSSNLLNGSLPEFLLD-LRALTGTLNLSFNQFSGQIPEMYGH 184
+P + L L L L N L SLP + D L L L L+ NQ IP G
Sbjct: 96 ASLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLK-ELRLNTNQLQ-SIPA--GA 150
Query: 185 F---PVMVSLDLRNNNL 198
F + +L L N L
Sbjct: 151 FDKLTNLQTLSLSTNQL 167
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 1e-05
Identities = 32/112 (28%), Positives = 42/112 (37%), Gaps = 9/112 (8%)
Query: 92 TRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNG 151
+L L S + A T L +L+L +N L L L L++N L
Sbjct: 38 EKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLA- 96
Query: 152 SLPEFLLD-LRALTGTLNLSFNQFSGQIPEMYGHFPVMVS---LDLRNNNLS 199
SLP + D L L L L NQ +P G F + L L N L
Sbjct: 97 SLPLGVFDHLTQLD-KLYLGGNQLKS-LPS--GVFDRLTKLKELRLNTNQLQ 144
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 58.5 bits (142), Expect = 1e-09
Identities = 59/287 (20%), Positives = 108/287 (37%), Gaps = 77/287 (26%)
Query: 340 EDLLRASAYVVGKSKNG--IMYKVVVGRGS------GMGAPT--VVAVRRLTEGDATWR- 388
+D+ VG S +G + + + +GRGS G+ T VA L + T
Sbjct: 9 DDIEELETKAVGMSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSE 68
Query: 389 FKDFESEVEAIARVQHPNIVRLKAFYYANDEK----LLISDFIRNGSLYAALHGFGLNRL 444
+ F+ E E + +QHPNIVR + + + +L+++ + +G+L L F + ++
Sbjct: 69 RQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKI 128
Query: 445 LPGTSKVT----------------------KNETI-VTSGTG---------SRISAISNV 472
K + I +T TG + + S
Sbjct: 129 -KVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFA 187
Query: 473 --------YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRK 524
++APE +Y K+ + DVY+FG+ +LE+ T P + + + + R+
Sbjct: 188 KAVIGTPEFMAPE--MYEEKYDESVDVYAFGMCMLEMATSEYPYS----ECQNAAQIYRR 241
Query: 525 AFRERRP--LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRP 569
+P +V P + KEI C + + R
Sbjct: 242 VTSGVKPASFDKVAIPEV-KEIIEG------------CIRQNKDERY 275
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 59.0 bits (143), Expect = 2e-09
Identities = 26/133 (19%), Positives = 45/133 (33%), Gaps = 21/133 (15%)
Query: 90 SLTRLSLASNNFS----KPIPANLFNATNLVYLDLAHNSF----CGPIPDRIKTLKNLTH 141
S+ SL + + K + A L ++ + L+ N+ + + I + K+L
Sbjct: 5 SIEGKSLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEI 64
Query: 142 LDLSSNLLNGSLPEFLLDLRALTG---------TLNLSFNQFSGQ----IPEMYGHFPVM 188
+ S E LR L T+ LS N F + + +
Sbjct: 65 AEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPL 124
Query: 189 VSLDLRNNNLSGE 201
L L NN L +
Sbjct: 125 EHLYLHNNGLGPQ 137
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 3e-05
Identities = 27/135 (20%), Positives = 45/135 (33%), Gaps = 21/135 (15%)
Query: 85 LGLLNSLTRLSLASNNF-----SKPIPANLFNATNLVYLDLAHNSF----CGPIPDRIKT 135
L + + N + L L LDL N+F + +K+
Sbjct: 183 FQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKS 242
Query: 136 LKNLTHLDLSSNLLNG----SLPEFLLDL--RALTGTLNLSFNQFSGQ-----IPEMYGH 184
NL L L+ LL+ ++ + L L TL L +N+ +
Sbjct: 243 WPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQ-TLRLQYNEIELDAVRTLKTVIDEK 301
Query: 185 FPVMVSLDLRNNNLS 199
P ++ L+L N S
Sbjct: 302 MPDLLFLELNGNRFS 316
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 5e-05
Identities = 21/150 (14%), Positives = 42/150 (28%), Gaps = 32/150 (21%)
Query: 83 SELGLLNSLTRLSLASNNFS----KPIPANLFNATNLVYLDLAHNSF----------CGP 128
+ L +S+ + L+ N + + N+ + +L + +
Sbjct: 26 AVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRL 85
Query: 129 IPDRIKTLKNLTHLDLSSNLLNG----SLPEFLLDLRALTGTLNLSFNQFS--------- 175
+ + L + LS N L +FL L L L N
Sbjct: 86 LLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLE-HLYLHNNGLGPQAGAKIAR 144
Query: 176 ----GQIPEMYGHFPVMVSLDLRNNNLSGE 201
+ + + P + S+ N L
Sbjct: 145 ALQELAVNKKAKNAPPLRSIICGRNRLENG 174
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 8e-05
Identities = 25/143 (17%), Positives = 44/143 (30%), Gaps = 27/143 (18%)
Query: 85 LGLLNSLTRLSLASNNFS----KPIPANLFNATNLVYLDLAHNSF-------------CG 127
L L + L+ N F +P+ L T L +L L +N
Sbjct: 90 LLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQEL 149
Query: 128 PIPDRIKTLKNLTHLDLSSNLLNG----SLPEFLLDLRALTGTLNLSFNQFSGQ-----I 178
+ + K L + N L + R L T+ + N + +
Sbjct: 150 AVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLH-TVKMVQNGIRPEGIEHLL 208
Query: 179 PEMYGHFPVMVSLDLRNNNLSGE 201
E + + LDL++N +
Sbjct: 209 LEGLAYCQELKVLDLQDNTFTHL 231
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 57.6 bits (140), Expect = 3e-09
Identities = 58/274 (21%), Positives = 100/274 (36%), Gaps = 87/274 (31%)
Query: 359 YKVV--VGRGSGMGAPTV-----------VAVRRLTE---GDATWRFKDFESEVEAIARV 402
YK+V +G G GM TV VA++ + + FE EV +++
Sbjct: 13 YKIVDKLGGG-GMS--TVYLAEDTILNIKVAIKAIFIPPREKEETLKR-FEREVHNSSQL 68
Query: 403 QHPNIVR----------------------LKAFYYAN-----DEKLLISDFIRNGSLYAA 435
H NIV L + ++ D + ++ I +G + A
Sbjct: 69 SHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDG-IKHA 127
Query: 436 LHGFGL--------NRLLP--GTSKVT-------KNETIVTSGTGSRISAISNVYLAPE- 477
H + N L+ T K+ +ET +T T + + Y +PE
Sbjct: 128 -HDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ-TNHVLGTVQ--YFSPEQ 183
Query: 478 ARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP-LSEVI 536
A+ G + D+YS GIVL E+L G P +G+ S+ K ++ P ++ +
Sbjct: 184 AK--GEATDECTDIYSIGIVLYEMLVGEPP-----FNGETAVSIAIKHIQDSVPNVTTDV 236
Query: 537 DPALVKEIHAKRQVLATFHIALNCTELDPEFRPR 570
+ + + + L TE D R +
Sbjct: 237 RKDIPQSLSN---------VILRATEKDKANRYK 261
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 57.6 bits (140), Expect = 3e-09
Identities = 46/207 (22%), Positives = 79/207 (38%), Gaps = 66/207 (31%)
Query: 359 YKV--VVGRGSGMGA---------PTVVAVRRLTE---GDATWRFKDFESEVEAIARVQH 404
Y++ +VGRG GMG +VA++ ++E D +R + + E R+Q
Sbjct: 36 YRLRRLVGRG-GMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTR-MQREARTAGRLQE 93
Query: 405 PNIVRLKAFYYANDEKLL-----------ISDFIR-NGSLY------------AAL---H 437
P++V + + + L ++ +R G L +AL H
Sbjct: 94 PHVVPI--HDFGEIDGQLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAH 151
Query: 438 GFGL--------NRLL--PGTSKVT-------KNETIVTSGTGSRISAISNVYLAPEARI 480
G N L+ + + + +T G+ + + Y+APE R
Sbjct: 152 AAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQ-LGNTVGTLY--YMAPE-RF 207
Query: 481 YGSKFTQKCDVYSFGIVLLEILTGRLP 507
S T + D+Y+ VL E LTG P
Sbjct: 208 SESHATYRADIYALTCVLYECLTGSPP 234
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 56.8 bits (138), Expect = 4e-09
Identities = 61/261 (23%), Positives = 98/261 (37%), Gaps = 83/261 (31%)
Query: 372 PTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYA---NDEKLLISDFIR 428
T VAV+ L +G + F +E + ++QH +VRL YA + +I++++
Sbjct: 37 HTKVAVKSLKQGSMS--PDAFLAEANLMKQLQHQRLVRL----YAVVTQEPIYIITEYME 90
Query: 429 NGSLYAAL-----HGFGLNRL-----------------------------LPGTSKVTK- 453
NGSL L +N+L L + K
Sbjct: 91 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKI 150
Query: 454 ---------NETIVTSGTGSRI----SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLE 500
+ T+ G++ +A PEA YG FT K DV+SFGI+L E
Sbjct: 151 ADFGLARLIEDNEYTAREGAKFPIKWTA-------PEAINYG-TFTIKSDVWSFGILLTE 202
Query: 501 ILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALN 559
I+T GR+P G N + + + +R RP +E++ +
Sbjct: 203 IVTHGRIPYPGMTN--PEVIQNLERGYRMVRP------DNCPEELY---------QLMRL 245
Query: 560 CTELDPEFRPRMRTVSESLDR 580
C + PE RP + L+
Sbjct: 246 CWKERPEDRPTFDYLRSVLED 266
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 57.4 bits (138), Expect = 4e-09
Identities = 26/122 (21%), Positives = 39/122 (31%), Gaps = 15/122 (12%)
Query: 55 CHW-SGIHCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NA 112
H SG+ C R+ L +LT L + + + +
Sbjct: 7 PHGSSGLRCTRDGALD-----------SLHHLPGAENLTELYIENQQHLQHLELRDLRGL 55
Query: 113 TNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFN 172
L L + + PD L+ L+LS N L SL + +L L LS N
Sbjct: 56 GELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALE-SLSWKTVQGLSLQ-ELVLSGN 113
Query: 173 QF 174
Sbjct: 114 PL 115
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 51.3 bits (122), Expect = 4e-07
Identities = 21/96 (21%), Positives = 33/96 (34%), Gaps = 2/96 (2%)
Query: 129 IPDRIKTLKNLTHLDLSSNLLNGSLP-EFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPV 187
+ +NLT L + + L L L L L + + P+ + P
Sbjct: 23 SLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELR-NLTIVKSGLRFVAPDAFHFTPR 81
Query: 188 MVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGLC 223
+ L+L N L + L+ SGNP C
Sbjct: 82 LSRLNLSFNALESLSWKTVQGLSLQELVLSGNPLHC 117
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 5e-09
Identities = 57/299 (19%), Positives = 96/299 (32%), Gaps = 110/299 (36%)
Query: 359 YKVV--VGRGS-GMGAPTVVAVRRLTEG--------------DATWRFKDFESEVEAIAR 401
+++ +GRG V L +G DA R D E++ + +
Sbjct: 34 FRIEKKIGRGQFS----EVYRAACLLDGVPVALKKVQIFDLMDAKAR-ADCIKEIDLLKQ 88
Query: 402 VQHPNIVRLKAFYYANDEKLLISDFIRNGSLY---------------------------- 433
+ HPN+++ A + ++E ++ + G L
Sbjct: 89 LNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSA 148
Query: 434 -AALHG-------------------------FGLNRLLPGTSKVTKNETIVTSGTGSRIS 467
+H GL R + ++V GT
Sbjct: 149 LEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAH--SLV--GTPY--- 201
Query: 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 527
Y++PE RI+ + + K D++S G +L E+ + P G D L SL +K +
Sbjct: 202 -----YMSPE-RIHENGYNFKSDIWSLGCLLYEMAALQSPFYG---DKMNLYSLCKKIEQ 252
Query: 528 ERRP--LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKLQ 584
P S+ L RQ++ C DPE RP V+ D K
Sbjct: 253 CDYPPLPSDHYSEEL-------RQLVN------MCINPDPEKRP---DVTYVYDVAKRM 295
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 5e-09
Identities = 48/278 (17%), Positives = 91/278 (32%), Gaps = 101/278 (36%)
Query: 359 YKVV--VGRGSGMGAPTVVAVRRLTEG-----------DATWRFK-DFESEVEAIARVQH 404
Y + +G GS G + V+ +G + + + + EV +A ++H
Sbjct: 26 YVRLQKIGEGS-FG--KAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKH 82
Query: 405 PNIVRLKAFYYANDEKLLISDFIRNGSLYAA---------------------------LH 437
PNIV+ + + N ++ D+ G L+ +H
Sbjct: 83 PNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH 142
Query: 438 G-------------------------FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNV 472
FG+ R+L T ++ + + GT
Sbjct: 143 DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELAR--ACI--GTPY-------- 190
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER-RP 531
YL+PE + K D+++ G VL E+ T + + +++LV K P
Sbjct: 191 YLSPE-ICENKPYNNKSDIWALGCVLYELCTLKHA-----FEAGSMKNLVLKIISGSFPP 244
Query: 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRP 569
+S L R +++ + +P RP
Sbjct: 245 VSLHYSYDL-------RSLVS------QLFKRNPRDRP 269
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 6e-09
Identities = 39/143 (27%), Positives = 57/143 (39%), Gaps = 12/143 (8%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG 127
T L+L LT P L L +L L L N + +L + L L L HN
Sbjct: 71 TKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISD 126
Query: 128 PIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPV 187
+ L L L L +N + + L L L TL+L NQ S I +
Sbjct: 127 ING--LVHLPQLESLYLGNNKI--TDITVLSRLTKLD-TLSLEDNQIS-DIVPL-AGLTK 179
Query: 188 MVSLDLRNNNLSGEIPQVGSLLN 210
+ +L L N++S ++ + L N
Sbjct: 180 LQNLYLSKNHIS-DLRALAGLKN 201
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 4e-07
Identities = 31/133 (23%), Positives = 49/133 (36%), Gaps = 13/133 (9%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG 127
SL L + ++ + L L L L L +N + L T L L L N
Sbjct: 115 KSLSLEHNGIS--DINGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDN---- 166
Query: 128 PIPD--RIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHF 185
I D + L L +L LS N ++ L L L+ L L L + + +
Sbjct: 167 QISDIVPLAGLTKLQNLYLSKNHIS-DLRA-LAGLKNLD-VLELFSQECLNKPINHQSNL 223
Query: 186 PVMVSLDLRNNNL 198
V ++ + +L
Sbjct: 224 VVPNTVKNTDGSL 236
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 49.7 bits (119), Expect = 9e-07
Identities = 21/121 (17%), Positives = 45/121 (37%), Gaps = 17/121 (14%)
Query: 83 SELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPD--RIKTLKNLT 140
+ +L + + + ++ + ++ I I+ L N+T
Sbjct: 18 FSDDAFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSD----IKSVQGIQYLPNVT 71
Query: 141 HLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYG--HFPVMVSLDLRNNNL 198
L L+ N L + + L +L+ L L L N ++ ++ + SL L +N +
Sbjct: 72 KLFLNGNKLT-DI-KPLANLKNLG-WLFLDEN----KVKDLSSLKDLKKLKSLSLEHNGI 124
Query: 199 S 199
S
Sbjct: 125 S 125
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 5e-04
Identities = 24/131 (18%), Positives = 40/131 (30%), Gaps = 24/131 (18%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG 127
+L L + ++ L L L L L+ N+ S + L NL L+L
Sbjct: 159 DTLSLEDNQISDI--VPLAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLN 214
Query: 128 PIPDRIKTLKNLTHLDLSSNLL--------NGSL--PEFLLDLRALTGTLNLSFNQ---- 173
+ L + + L +G P L T ++ F Q
Sbjct: 215 KPINHQSNLVVPNTVKNTDGSLVTPEIISDDGDYEKPNVKWHLPEFTNEVSFIFYQPVTI 274
Query: 174 ------FSGQI 178
F G++
Sbjct: 275 GKAKARFHGRV 285
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396 | Back alignment and structure |
|---|
Score = 56.8 bits (137), Expect = 7e-09
Identities = 34/212 (16%), Positives = 63/212 (29%), Gaps = 68/212 (32%)
Query: 393 ESEVEAIARVQHPNIVRLKAFYYANDEKL--LISDFIRNGSLY----------------- 433
E E + ++ H NIV+L A + LI +F GSLY
Sbjct: 55 MREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEF 114
Query: 434 -----------AALHGFGL--------NRLLP--------------GTSKVTKNETIVTS 460
L G+ N + G ++ +++ S
Sbjct: 115 LIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS 174
Query: 461 GTGSRISAISNVYLAPE-------ARIYGSKFTQKCDVYSFGIVLLEILTGRLP---DAG 510
G+ YL P+ + + K+ D++S G+ TG LP G
Sbjct: 175 LYGTEE------YLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEG 228
Query: 511 PENDGKGLESLVRKAFRERRPLSEVIDPALVK 542
P + + + ++ + + +
Sbjct: 229 PRRNKEVMYKIITGKPSGAISGVQKAENGPID 260
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 57.0 bits (138), Expect = 9e-09
Identities = 58/261 (22%), Positives = 96/261 (36%), Gaps = 83/261 (31%)
Query: 372 PTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR---------------------L 410
T VAV+ + G + + F +E + +QH +V+ L
Sbjct: 212 HTKVAVKTMKPGSMS--VEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSL 269
Query: 411 KAFYYANDEKLLIS--------------------DFI------RN----GSLYAALHGFG 440
F +++ ++I N SL + FG
Sbjct: 270 LDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFG 329
Query: 441 LNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLE 500
L R++ + T+ G++ I APEA +G FT K DV+SFGI+L+E
Sbjct: 330 LARVI--------EDNEYTAREGAKF-PIKW--TAPEAINFG-SFTIKSDVWSFGILLME 377
Query: 501 ILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALN 559
I+T GR+P G N + + + +R RP +E++ +I +
Sbjct: 378 IVTYGRIPYPGMSN--PEVIRALERGYRMPRP------ENCPEELY---------NIMMR 420
Query: 560 CTELDPEFRPRMRTVSESLDR 580
C + PE RP + LD
Sbjct: 421 CWKNRPEERPTFEYIQSVLDD 441
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 56.3 bits (136), Expect = 9e-09
Identities = 35/213 (16%), Positives = 64/213 (30%), Gaps = 68/213 (31%)
Query: 392 FESEVEAIARVQHPNIVRLKAFY--YANDEKLLISDFIRNGSLY---------------- 433
E E + ++ H NIV+L A K+LI +F GSLY
Sbjct: 54 QMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESE 113
Query: 434 ------------AALHGFGL--------NRLLP--------------GTSKVTKNETIVT 459
L G+ N + G ++ +++
Sbjct: 114 FLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFV 173
Query: 460 SGTGSRISAISNVYLAPE-------ARIYGSKFTQKCDVYSFGIVLLEILTGRLP---DA 509
S G+ YL P+ + + K+ D++S G+ TG LP
Sbjct: 174 SLYGTEE------YLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFE 227
Query: 510 GPENDGKGLESLVRKAFRERRPLSEVIDPALVK 542
GP + + + ++ + + +
Sbjct: 228 GPRRNKEVMYKIITGKPSGAISGVQKAENGPID 260
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 1e-08
Identities = 25/151 (16%), Positives = 54/151 (35%), Gaps = 25/151 (16%)
Query: 55 CHWSGIHCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NAT 113
C + + C ++ +P + L L +N F+ +F
Sbjct: 11 CEGTTVDCSNQKLNK-----------IPE--HIPQYTAELRLNNNEFTVLEATGIFKKLP 57
Query: 114 NLVYLDLAHNSFCGPIPDRI-KTLKNLTHLDLSSNLLNGSLPEFLLD-LRALTGTLNLSF 171
L ++ ++N I + + + + L+SN L ++ + L +L TL L
Sbjct: 58 QLRKINFSNNKI-TDIEEGAFEGASGVNEILLTSNRLE-NVQHKMFKGLESLK-TLMLRS 114
Query: 172 NQFSGQIPEMYGHF---PVMVSLDLRNNNLS 199
N+ + + F + L L +N ++
Sbjct: 115 NRIT-CVGN--DSFIGLSSVRLLSLYDNQIT 142
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 1e-04
Identities = 20/84 (23%), Positives = 33/84 (39%), Gaps = 4/84 (4%)
Query: 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNA-TNLVYLDLAHNS 124
V + L + L L SL L L SN + + + F +++ L L N
Sbjct: 82 GVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITC-VGNDSFIGLSSVRLLSLYDNQ 140
Query: 125 FCGPIPDRI-KTLKNLTHLDLSSN 147
+ TL +L+ L+L +N
Sbjct: 141 I-TTVAPGAFDTLHSLSTLNLLAN 163
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 1e-08
Identities = 35/158 (22%), Positives = 57/158 (36%), Gaps = 21/158 (13%)
Query: 65 NRVTSLYLPNRNLT----GYMPSELGLLNSLTRLSLASNNFSKPIPANLFNA-----TNL 115
+ + L + LT + S L + +L L+L SN + +
Sbjct: 28 QQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKI 87
Query: 116 VYLDLAHNSF----CGPIPDRIKTLKNLTHLDLSSNLLNGS----LPEFLLDLRALTGTL 167
L L + CG + ++TL L L LS NLL + L E LLD + L
Sbjct: 88 QKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKL 147
Query: 168 NLSFNQFSGQ----IPEMYGHFPVMVSLDLRNNNLSGE 201
L + S + + P L + NN+++
Sbjct: 148 QLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEA 185
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 4e-07
Identities = 30/158 (18%), Positives = 53/158 (33%), Gaps = 23/158 (14%)
Query: 66 RVTSLYLPNRNLT----GYMPSELGLLNSLTRLSLASNNFS----KPIPANL-FNATNLV 116
R+ L L +L+ + S L L++++N+ + + + L + L
Sbjct: 143 RLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLE 202
Query: 117 YLDLAHNSF----CGPIPDRIKTLKNLTHLDLSSNLLNGS----LPEFLLD-LRALTGTL 167
L L C + + + +L L L SN L L LL L TL
Sbjct: 203 ALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLR-TL 261
Query: 168 NLSFNQFSGQ----IPEMYGHFPVMVSLDLRNNNLSGE 201
+ + + + + + L L N L E
Sbjct: 262 WIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDE 299
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 3e-06
Identities = 31/158 (19%), Positives = 56/158 (35%), Gaps = 23/158 (14%)
Query: 66 RVTSLYLPNRNLT----GYMPSELGLLNSLTRLSLASNNFSKP-----IPANLFNATNLV 116
++ +L L + +T + + SL L+L SN P L ++ L
Sbjct: 200 QLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLR 259
Query: 117 YLDLAHNSF----CGPIPDRIKTLKNLTHLDLSSNLLNGS----LPEFLLD-LRALTGTL 167
L + CG + ++ ++L L L+ N L L E LL+ L +L
Sbjct: 260 TLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLE-SL 318
Query: 168 NLSFNQFSGQ----IPEMYGHFPVMVSLDLRNNNLSGE 201
+ F+ + ++ L + NN L
Sbjct: 319 WVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDA 356
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 1e-05
Identities = 31/133 (23%), Positives = 43/133 (32%), Gaps = 19/133 (14%)
Query: 85 LGLLNSLTRLSLASNNFS----KPIPANLFNA-TNLVYLDLAHNSF----CGPIPDRIKT 135
L SL LSLA N + + L L L + SF C +
Sbjct: 280 LRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQ 339
Query: 136 LKNLTHLDLSSNLLNGS----LPEFLLD-LRALTGTLNLSFNQFSGQ----IPEMYGHFP 186
+ L L +S+N L + L + L L L L+ S +
Sbjct: 340 NRFLLELQISNNRLEDAGVRELCQGLGQPGSVLR-VLWLADCDVSDSSCSSLAATLLANH 398
Query: 187 VMVSLDLRNNNLS 199
+ LDL NN L
Sbjct: 399 SLRELDLSNNCLG 411
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676 | Back alignment and structure |
|---|
Score = 56.6 bits (136), Expect = 1e-08
Identities = 37/200 (18%), Positives = 59/200 (29%), Gaps = 63/200 (31%)
Query: 393 ESEVEAIARVQHPNIVRLKAFY------YANDEKLLISDFIRNGSLYAALHGFGLNRLLP 446
E++ + ++ HPN+V + ND LL ++ G L L+ F L
Sbjct: 60 CLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLK 119
Query: 447 -------------------------------------------------GTSKVTKNETI 457
G +K +
Sbjct: 120 EGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL 179
Query: 458 VTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKG 517
T G+ YLAPE + K+T D +SFG + E +TG P P
Sbjct: 180 CTEFVGTL------QYLAPEL-LEQKKYTVTVDYWSFGTLAFECITGFRP-FLPNWQPVQ 231
Query: 518 LESLVRKAFRERRPLSEVID 537
VR+ E + + +
Sbjct: 232 WHGKVREKSNEHIVVYDDLT 251
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 55.3 bits (134), Expect = 2e-08
Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 18/107 (16%)
Query: 475 APEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLS 533
APE+ +T + DV+S+GI L E+ + G P G D K + ++++ FR P
Sbjct: 215 APESIFNC-VYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYK-MIKEGFRMLSPE- 271
Query: 534 EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580
HA ++ + I C + DP RP + + + +++
Sbjct: 272 -----------HAPAEM---YDIMKTCWDADPLKRPTFKQIVQLIEK 304
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 2e-04
Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 4/77 (5%)
Query: 360 KVVVGRGSGM---GAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYY 415
KVV G+ A VAV+ L + SE++ ++ + H NIV L
Sbjct: 38 KVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT 97
Query: 416 ANDEKLLISDFIRNGSL 432
L+I+++ G L
Sbjct: 98 IGGPTLVITEYCCYGDL 114
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 55.9 bits (135), Expect = 2e-08
Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 30/143 (20%)
Query: 439 FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVL 498
FGL+RL+ T+ G++ I + APE+ Y KF+ K DV++FG++L
Sbjct: 362 FGLSRLM--------TGDTYTAHAGAKF-PIK--WTAPESLAYN-KFSIKSDVWAFGVLL 409
Query: 499 LEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIA 557
EI T G P G + + L+ K +R RP ++++ +
Sbjct: 410 WEIATYGMSPYPGIDL--SQVYELLEKDYRMERP------EGCPEKVY---------ELM 452
Query: 558 LNCTELDPEFRPRMRTVSESLDR 580
C + +P RP + ++ +
Sbjct: 453 RACWQWNPSDRPSFAEIHQAFET 475
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 2e-08
Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 19/107 (17%)
Query: 475 APEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLS 533
APEA +T + DV+SFG+++ EI T G P G + L L+++ R +P
Sbjct: 273 APEALFDR-VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV--EELFKLLKEGHRMDKPA- 328
Query: 534 EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580
+ ++ + + +C P RP + + E LDR
Sbjct: 329 -----------NCTNEL---YMMMRDCWHAVPSQRPTFKQLVEDLDR 361
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 3e-08
Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 8/111 (7%)
Query: 67 VTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNSF 125
VT LYL + N +P EL LT + L++N S + F N T L+ L L++N
Sbjct: 33 VTELYL-DGNQFTLVPKELSNYKHLTLIDLSNNRIST-LSNQSFSNMTQLLTLILSYNRL 90
Query: 126 CGPIPDRI-KTLKNLTHLDLSSNLLNGSLPEFLLD-LRALTGTLNLSFNQF 174
IP R LK+L L L N ++ +PE + L AL+ L + N
Sbjct: 91 -RCIPPRTFDGLKSLRLLSLHGNDIS-VVPEGAFNDLSALS-HLAIGANPL 138
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 6e-06
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 13/104 (12%)
Query: 105 IPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLD-LRAL 163
+P + ++ L L N F +P + K+LT +DLS+N ++ +L + L
Sbjct: 25 LPKGI--PRDVTELYLDGNQFTL-VPKELSNYKHLTLIDLSNNRIS-TLSNQSFSNMTQL 80
Query: 164 TGTLNLSFNQFSGQIPEMYGHFPVMVSL---DLRNNNLSGEIPQ 204
TL LS+N+ IP F + SL L N++S +P+
Sbjct: 81 L-TLILSYNRLR-CIPP--RTFDGLKSLRLLSLHGNDIS-VVPE 119
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 54.6 bits (132), Expect = 4e-08
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 18/107 (16%)
Query: 475 APEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLS 533
APE+ G +T K DV+S+GI+L EI + G P G D + L++ F+ +P
Sbjct: 242 APESLFEG-IYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYK-LIQNGFKMDQPF- 298
Query: 534 EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580
+A ++ + I +C D RP ++ L
Sbjct: 299 -----------YATEEI---YIIMQSCWAFDSRKRPSFPNLTSFLGC 331
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 4e-08
Identities = 28/108 (25%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 475 APEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLS 533
APEA +T + DV+SFG+++ EI T G P G + L L+++ R +P
Sbjct: 227 APEALFDR-VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV--EELFKLLKEGHRMDKPA- 282
Query: 534 EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
+ ++ + + +C P RP + + E LDR+
Sbjct: 283 -----------NCTNEL---YMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 53.8 bits (130), Expect = 5e-08
Identities = 31/107 (28%), Positives = 44/107 (41%), Gaps = 19/107 (17%)
Query: 475 APEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLS 533
APEA KF+ K DV+SFGI+L EI + GR+P K + V K ++ P
Sbjct: 182 APEALREK-KFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--KDVVPRVEKGYKMDAP-- 236
Query: 534 EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580
++ + NC LD RP + E L+
Sbjct: 237 ----DGCPPAVY---------EVMKNCWHLDAAMRPSFLQLREQLEH 270
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 5e-08
Identities = 35/154 (22%), Positives = 57/154 (37%), Gaps = 24/154 (15%)
Query: 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSF 125
L+ + M + L L + L+L++NN K I ++L NL L L N
Sbjct: 26 EKVELHGMIPPIEK-MDATLSTLKACKHLALSTNNIEK-I-SSLSGMENLRILSLGRN-- 80
Query: 126 CGPIPDRIKTLKN-------LTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQI 178
IK ++N L L +S N + SL + L L L +S N+ +
Sbjct: 81 ------LIKKIENLDAVADTLEELWISYNQIA-SL-SGIEKLVNLR-VLYMSNNKIT-NW 130
Query: 179 PEMY--GHFPVMVSLDLRNNNLSGEIPQVGSLLN 210
E+ + L L N L + + +
Sbjct: 131 GEIDKLAALDKLEDLLLAGNPLYNDYKENNATSE 164
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 7e-05
Identities = 20/111 (18%), Positives = 38/111 (34%), Gaps = 7/111 (6%)
Query: 91 LTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG--PIPDRIKTLKNLTHLDLSSNL 148
+ + + + AT ++L H + + TLK HL LS+N
Sbjct: 1 MAKATTIKDAIRIFEERKSVVATEAEKVEL-HGMIPPIEKMDATLSTLKACKHLALSTNN 59
Query: 149 LNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLS 199
+ L + L L+L N +I + + L + N ++
Sbjct: 60 I--EKISSLSGMENLR-ILSLGRNLIK-KIENLDAVADTLEELWISYNQIA 106
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 54.4 bits (131), Expect = 5e-08
Identities = 61/261 (23%), Positives = 95/261 (36%), Gaps = 83/261 (31%)
Query: 372 PTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR---------------------L 410
T VA++ L G + + F E + + +++H +V+ L
Sbjct: 208 TTRVAIKTLKPGTMS--PEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSL 265
Query: 411 KAFYYANDEKLLIS----DF---IRNGSLY-----------AA---LHG---------FG 440
F K L D I +G Y A L G FG
Sbjct: 266 LDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFG 325
Query: 441 LNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLE 500
L RL+ + T+ G++ I + APEA +YG +FT K DV+SFGI+L E
Sbjct: 326 LARLI--------EDNEYTARQGAKF-PIK--WTAPEAALYG-RFTIKSDVWSFGILLTE 373
Query: 501 ILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALN 559
+ T GR+P G N + + V + +R P P + + +
Sbjct: 374 LTTKGRVPYPGMVN--REVLDQVERGYRMPCPPEC---PESLHD------------LMCQ 416
Query: 560 CTELDPEFRPRMRTVSESLDR 580
C +PE RP + L+
Sbjct: 417 CWRKEPEERPTFEYLQAFLED 437
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 53.6 bits (129), Expect = 6e-08
Identities = 34/251 (13%), Positives = 68/251 (27%), Gaps = 56/251 (22%)
Query: 362 VVGRGSGMGAPTV-----------VAVRRL-TEGDATWRFKD-FESEVEAIARVQHPNIV 408
G VA+ + +G S ++R+ P +
Sbjct: 38 FHGGV-PPL--QFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVA 94
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISA 468
R+ + L+++++IR GSL P + + A
Sbjct: 95 RVLDVVHTRAGGLVVAEWIRGGSLQEVADT----SPSPVGA------IRAMQSLAAAADA 144
Query: 469 I------------SNVYLAPEARI------YGSKFTQKCDVYSFGIVLLEILTGRLPDAG 510
S V ++ + + + D+ G L +L R P
Sbjct: 145 AHRAGVALSIDHPSRVRVSIDGDVVLAYPATMPDANPQDDIRGIGASLYALLVNRWPLPE 204
Query: 511 PENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPR 570
GL R + +++ D + +I A +A + D R
Sbjct: 205 AGVRS-GLAPAERDTAGQPIEPADI-DRDIPFQISA---------VAARSVQGDGGIRSA 253
Query: 571 MRTVSESLDRV 581
T+ + +
Sbjct: 254 S-TLLNLMQQA 263
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 6e-08
Identities = 32/110 (29%), Positives = 44/110 (40%), Gaps = 5/110 (4%)
Query: 65 NRVTSLYLPNRNLT-GYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHN 123
+ V L L N G + L LS + + I ANL L L+L+ N
Sbjct: 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTS-I-ANLPKLNKLKKLELSDN 74
Query: 124 SFCGPIPDRIKTLKNLTHLDLSSNLLNG-SLPEFLLDLRALTGTLNLSFN 172
G + + NLTHL+LS N + S E L L L +L+L
Sbjct: 75 RVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLK-SLDLFNC 123
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 1e-06
Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 4/83 (4%)
Query: 117 YLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSG 176
LD + ++ G + + L L + L S+ L L L L LS N+ SG
Sbjct: 23 VLDNSRSN-EGKLEGLTDEFEELEFLSTINVGLT-SI-ANLPKLNKLK-KLELSDNRVSG 78
Query: 177 QIPEMYGHFPVMVSLDLRNNNLS 199
+ + P + L+L N +
Sbjct: 79 GLEVLAEKCPNLTHLNLSGNKIK 101
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 2e-04
Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 4/83 (4%)
Query: 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKP-IPANLFNATNLVYLDLAHN 123
N++ L L + ++G + +LT L+L+ N L NL LDL +
Sbjct: 64 NKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNC 123
Query: 124 SFCGPIPDR---IKTLKNLTHLD 143
R K L LT+LD
Sbjct: 124 EVTNLNDYRENVFKLLPQLTYLD 146
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 53.8 bits (130), Expect = 6e-08
Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 18/107 (16%)
Query: 475 APEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLS 533
APE+ +T + DV+S+GI+L EI + G P G + K + LV+ ++ +P
Sbjct: 234 APESIFDC-VYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYK-LVKDGYQMAQPA- 290
Query: 534 EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580
A + + + I C L+P RP + + L
Sbjct: 291 -----------FAPKNI---YSIMQACWALEPTHRPTFQQICSFLQE 323
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 1e-07
Identities = 31/107 (28%), Positives = 44/107 (41%), Gaps = 19/107 (17%)
Query: 475 APEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLS 533
APEA KF+ K DV+SFGI+L EI + GR+P K + V K ++ P
Sbjct: 354 APEALREK-KFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--KDVVPRVEKGYKMDAP-- 408
Query: 534 EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580
++ + NC LD RP + E L+
Sbjct: 409 ----DGCPPAVY---------DVMKNCWHLDAATRPTFLQLREQLEH 442
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 1e-07
Identities = 27/107 (25%), Positives = 41/107 (38%), Gaps = 19/107 (17%)
Query: 475 APEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLS 533
PEA + G FT K D +SFG++L EI + G +P N + + V R P
Sbjct: 213 PPEAFMEG-IFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEFVTSGGRMDPP-- 267
Query: 534 EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580
++ I C + PE RP + E ++
Sbjct: 268 ----KNCPGPVY---------RIMTQCWQHQPEDRPNFAIILERIEY 301
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 2e-05
Identities = 20/77 (25%), Positives = 33/77 (42%)
Query: 356 GIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYY 415
G +Y+ V +P VAV+ L E + DF E I++ H NIVR
Sbjct: 44 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 103
Query: 416 ANDEKLLISDFIRNGSL 432
+ + ++ + + G L
Sbjct: 104 QSLPRFILMELMAGGDL 120
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 1e-07
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 475 APEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLS 533
APEA +T + DV+SFG++L EI T G P G + L L+++ R +P
Sbjct: 261 APEALFDR-IYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV--EELFKLLKEGHRMDKPS- 316
Query: 534 EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
+ ++ + + +C P RP + + E LDR+
Sbjct: 317 -----------NCTNEL---YMMMRDCWHAVPSQRPTFKQLVEDLDRI 350
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 53.0 bits (127), Expect = 1e-07
Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 18/108 (16%)
Query: 474 LAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPL 532
+APE I+ +T + DV+SFG++L EI + G P G + D + +++ R R P
Sbjct: 262 MAPET-IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-FCRRLKEGTRMRAPD 319
Query: 533 SEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580
+ ++ + L+C +P RP + E L
Sbjct: 320 ------------YTTPEM---YQTMLDCWHGEPSQRPTFSELVEHLGN 352
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 1e-07
Identities = 27/107 (25%), Positives = 42/107 (39%), Gaps = 19/107 (17%)
Query: 475 APEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLS 533
PEA + G FT K D +SFG++L EI + G +P N + + V R P
Sbjct: 254 PPEAFMEG-IFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEFVTSGGRMDPP-- 308
Query: 534 EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580
+ + + I C + PE RP + E ++
Sbjct: 309 KNCPGPV-------------YRIMTQCWQHQPEDRPNFAIILERIEY 342
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 2e-05
Identities = 20/77 (25%), Positives = 33/77 (42%)
Query: 356 GIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYY 415
G +Y+ V +P VAV+ L E + DF E I++ H NIVR
Sbjct: 85 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 144
Query: 416 ANDEKLLISDFIRNGSL 432
+ + ++ + + G L
Sbjct: 145 QSLPRFILLELMAGGDL 161
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 53.3 bits (128), Expect = 1e-07
Identities = 62/261 (23%), Positives = 96/261 (36%), Gaps = 83/261 (31%)
Query: 372 PTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR---------------------L 410
T VA++ L G + + F E + + +++H +V+ L
Sbjct: 291 TTRVAIKTLKPGTMS--PEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSL 348
Query: 411 KAFYYANDEKLLIS----DF---IRNGSLY-----------AA---LHG---------FG 440
F K L D I +G Y A L G FG
Sbjct: 349 LDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFG 408
Query: 441 LNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLE 500
L RL+ + T+ G++ I + APEA +YG +FT K DV+SFGI+L E
Sbjct: 409 LARLI--------EDNEYTARQGAKF-PIK--WTAPEAALYG-RFTIKSDVWSFGILLTE 456
Query: 501 ILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALN 559
+ T GR+P G N + + V + +R P P + +H +
Sbjct: 457 LTTKGRVPYPGMVN--REVLDQVERGYRMPCP------PECPESLH---------DLMCQ 499
Query: 560 CTELDPEFRPRMRTVSESLDR 580
C +PE RP + L+
Sbjct: 500 CWRKEPEERPTFEYLQAFLED 520
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 2e-07
Identities = 23/108 (21%), Positives = 39/108 (36%), Gaps = 19/108 (17%)
Query: 475 APEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLS 533
A E+ KFT K DV+SFG++L E++T G P + + + R +P
Sbjct: 200 ALESLQTQ-KFTTKSDVWSFGVLLWELMTRGAPPYPDVNT--FDITVYLLQGRRLLQP-- 254
Query: 534 EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
++ + L C E RP + + +
Sbjct: 255 ----EYCPDPLY---------EVMLKCWHPKAEMRPSFSELVSRISAI 289
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 6e-04
Identities = 13/64 (20%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
Query: 370 GAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLL-ISDFIR 428
G AV+ L F +E + HPN++ L ++ L + +++
Sbjct: 51 GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK 110
Query: 429 NGSL 432
+G L
Sbjct: 111 HGDL 114
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 2e-07
Identities = 26/107 (24%), Positives = 44/107 (41%), Gaps = 18/107 (16%)
Query: 475 APEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLS 533
APE +T + DV+SFG++L EI + G P G + D + +++ R R P
Sbjct: 218 APETIFDR-VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR-RLKEGTRMRAPD- 274
Query: 534 EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580
+ ++ + L+C +P RP + E L
Sbjct: 275 -----------YTTPEM---YQTMLDCWHGEPSQRPTFSELVEHLGN 307
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 52.3 bits (124), Expect = 2e-07
Identities = 25/213 (11%), Positives = 55/213 (25%), Gaps = 26/213 (12%)
Query: 13 LFPAPLCFSLNQDGLALLALKAAIAQDPTRALDSWSESDSTPCHWSGIHCIRNRVTSLYL 72
+ + + + W + D S I ++ +
Sbjct: 112 ITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQ--VDLSPVLD 169
Query: 73 PNRNLTGYMPSELGLL-------NSLTRLSLASNNFSKPIPANLFNA--TNLVYLDL--- 120
L L +L L + S + ++ + NL L L
Sbjct: 170 AMPLLNNLKIKGTNNLSIGKKPRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVG 229
Query: 121 AHNSFCGPIPDRI------KTLKNLTHLDLSSNLLNGSLPEFLLDLRALTG--TLNLSFN 172
+ + NL L + + E L+ L T+++S
Sbjct: 230 VEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAG 289
Query: 173 QFSG----QIPEMYGHFPVMVSLDLRNNNLSGE 201
+ + + + ++++ N LS E
Sbjct: 290 VLTDEGARLLLDHVDKIKHLKFINMKYNYLSDE 322
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 47.6 bits (112), Expect = 7e-06
Identities = 27/144 (18%), Positives = 54/144 (37%), Gaps = 17/144 (11%)
Query: 64 RNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNA-------TNLV 116
+ S LP+ + + S+L L L L + ++ N+F NL
Sbjct: 197 SLEIISGGLPDSVVEDILGSDLPNLEKL-VLYVGVEDYGFDGDMNVFRPLFSKDRFPNLK 255
Query: 117 YLDLAHNSFCGPIPDRI---KTLKNLTHLDLSSNLLNGSLPEFLLD----LRALTGTLNL 169
+L + + + L L +D+S+ +L LLD ++ L +N+
Sbjct: 256 WLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLK-FINM 314
Query: 170 SFNQFSGQ-IPEMYGHFPVMVSLD 192
+N S + E+ P+ + +
Sbjct: 315 KYNYLSDEMKKELQKSLPMKIDVS 338
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 3e-07
Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 23/109 (21%)
Query: 475 APEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLE--SLVRKAFRERRP 531
PE+ +Y KFT + DV+SFG++L EI T G+ P N E + + RP
Sbjct: 203 PPESIMYR-KFTTESDVWSFGVILWEIFTYGKQPWFQLSNT----EVIECITQGRVLERP 257
Query: 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580
KE++ + L C + +P+ R ++ + + L
Sbjct: 258 ------RVCPKEVY---------DVMLGCWQREPQQRLNIKEIYKILHA 291
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 1e-05
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 360 KVVVGRGSGM---GAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYA 416
KV + + +VAV+ L + R KDF+ E E + +QH +IV+
Sbjct: 30 KVFLAECYNLSPTKDKMLVAVKALKDPTLAAR-KDFQREAELLTNLQHEHIVKFYGVCGD 88
Query: 417 NDEKLLISDFIRNGSL 432
D +++ +++++G L
Sbjct: 89 GDPLIMVFEYMKHGDL 104
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 49.7 bits (119), Expect = 3e-07
Identities = 33/111 (29%), Positives = 46/111 (41%), Gaps = 7/111 (6%)
Query: 65 NRVTSLYLPNRNLT-GYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHN 123
V L L N G + +L LSL + + +NL L L+L+ N
Sbjct: 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLIS-V-SNLPKLPKLKKLELSEN 81
Query: 124 SFCGPIPDRIKTLKNLTHLDLSSNLLN--GSLPEFLLDLRALTGTLNLSFN 172
G + + L NLTHL+LS N L +L E L L L +L+L
Sbjct: 82 RIFGGLDMLAEKLPNLTHLNLSGNKLKDISTL-EPLKKLECLK-SLDLFNC 130
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 1e-06
Identities = 25/92 (27%), Positives = 34/92 (36%), Gaps = 5/92 (5%)
Query: 108 NLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTL 167
LV LD ++ G I NL L L + L S+ L L L L
Sbjct: 22 TPAAVRELV-LDNCKSN-DGKIEGLTAEFVNLEFLSLINVGLI-SV-SNLPKLPKLK-KL 76
Query: 168 NLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLS 199
LS N+ G + + P + L+L N L
Sbjct: 77 ELSENRIFGGLDMLAEKLPNLTHLNLSGNKLK 108
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 39.7 bits (93), Expect = 7e-04
Identities = 21/82 (25%), Positives = 30/82 (36%), Gaps = 4/82 (4%)
Query: 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKP-IPANLFNATNLVYLDLAHNS 124
++ L L + G + L +LT L+L+ N L L LDL +
Sbjct: 72 KLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCE 131
Query: 125 FCGPIPDR---IKTLKNLTHLD 143
R K L LT+LD
Sbjct: 132 VTNLNDYRESVFKLLPQLTYLD 153
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 3e-07
Identities = 25/108 (23%), Positives = 45/108 (41%), Gaps = 19/108 (17%)
Query: 475 APEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLS 533
A E+ +T DV++FG+ + EI+T G+ P AG EN + + + R ++P
Sbjct: 207 ALESLADN-LYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN--AEIYNYLIGGNRLKQP-- 261
Query: 534 EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
+V + + C DP+ RP + L+ +
Sbjct: 262 ----------PECMEEV---YDLMYQCWSADPKQRPSFTCLRMELENI 296
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 3e-04
Identities = 15/81 (18%), Positives = 29/81 (35%), Gaps = 8/81 (9%)
Query: 360 KVVVGRGSGM-GAPTVVAVRRLTEGDAT-WRFKDFESEVEAIARVQHPNIVRL------K 411
V + G+ VAV+ L ++F E + HP++ +L
Sbjct: 38 SVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRS 97
Query: 412 AFYYANDEKLLISDFIRNGSL 432
++I F+++G L
Sbjct: 98 RAKGRLPIPMVILPFMKHGDL 118
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 3e-07
Identities = 44/135 (32%), Positives = 62/135 (45%), Gaps = 13/135 (9%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNA-TNLVYLDLAHNSFC 126
T L L +L L SLT+L L N +P +FN T+L YL+L+ N
Sbjct: 31 TYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQS-LPNGVFNKLTSLTYLNLSTNQL- 88
Query: 127 GPIPDRI-KTLKNLTHLDLSSNLLNGSLPEFLLD-LRALTGTLNLSFNQFSGQIPEMYGH 184
+P+ + L L L L++N L SLP+ + D L L L L NQ +P+ G
Sbjct: 89 QSLPNGVFDKLTQLKELALNTNQLQ-SLPDGVFDKLTQLK-DLRLYQNQLKS-VPD--GV 143
Query: 185 FPVMVSLD---LRNN 196
F + SL L +N
Sbjct: 144 FDRLTSLQYIWLHDN 158
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 40.4 bits (95), Expect = 6e-04
Identities = 34/113 (30%), Positives = 49/113 (43%), Gaps = 7/113 (6%)
Query: 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNA-TNLVYLDLAHN 123
+T LYL L L SLT L+L++N +P +F+ T L L L N
Sbjct: 52 TSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQS-LPNGVFDKLTQLKELALNTN 110
Query: 124 SFCGPIPDRI-KTLKNLTHLDLSSNLLNGSLPEFLLD-LRALTGTLNLSFNQF 174
+PD + L L L L N L S+P+ + D L +L + L N +
Sbjct: 111 QL-QSLPDGVFDKLTQLKDLRLYQNQLK-SVPDGVFDRLTSLQ-YIWLHDNPW 160
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 4e-07
Identities = 27/108 (25%), Positives = 51/108 (47%), Gaps = 19/108 (17%)
Query: 475 APEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLS 533
A E+ +T + DV+SFG++L EI+T G P G + L +L++ R RP
Sbjct: 220 AIESLFDH-IYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP--ERLFNLLKTGHRMERPD- 275
Query: 534 EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
+ ++ + + L C + +P+ RP +S+ L+++
Sbjct: 276 -----------NCSEEM---YRLMLQCWKQEPDKRPVFADISKDLEKM 309
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 5e-05
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Query: 360 KVVVGRGSGM---GAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYA 416
KVV + T VAV+ L E + +D SE + +V HP++++L
Sbjct: 38 KVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQ 97
Query: 417 NDEKLLISDFIRNGSL 432
+ LLI ++ + GSL
Sbjct: 98 DGPLLLIVEYAKYGSL 113
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 5e-07
Identities = 37/158 (23%), Positives = 57/158 (36%), Gaps = 55/158 (34%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKL-LISDFIRNGSLY-------------AA----- 435
EVE + ++HPNI+RL Y+ + ++ LI ++ G++Y A
Sbjct: 59 EVEIQSHLRHPNILRLYG-YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 117
Query: 436 -------LHGFGL--------NRLLP----------GTSKVTKNETIVTS-GTGSRISAI 469
H + N LL G S + GT
Sbjct: 118 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLD----- 172
Query: 470 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 507
YL PE I G +K D++S G++ E L G+ P
Sbjct: 173 ---YLPPEM-IEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 5e-07
Identities = 25/109 (22%), Positives = 43/109 (39%), Gaps = 23/109 (21%)
Query: 475 APEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPL- 532
A E+ Y +T DV+S+G++L EI++ G P G L + + +R +PL
Sbjct: 209 AIESLNYS-VYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC--AELYEKLPQGYRLEKPLN 265
Query: 533 -SEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580
+ + + + C P RP + SL+R
Sbjct: 266 CDDEV-----------------YDLMRQCWREKPYERPSFAQILVSLNR 297
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 3e-04
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Query: 360 KVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYAND 418
+V+ R G A++R+ E + +DF E+E + ++ HPNI+ L
Sbjct: 40 QVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG 99
Query: 419 EKLLISDFIRNGSL 432
L ++ +G+L
Sbjct: 100 YLYLAIEYAPHGNL 113
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 5e-07
Identities = 29/115 (25%), Positives = 44/115 (38%), Gaps = 35/115 (30%)
Query: 475 APEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLS 533
PE+ +Y KFT + DV+SFG+VL EI T G+ P N
Sbjct: 228 PPESILYR-KFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT------------------- 267
Query: 534 EVIDPALVKEIHAKRQVL--------ATFHIALNCTELDPEFRPRMRTVSESLDR 580
E ID + + + L + I C + +P+ R ++ V L
Sbjct: 268 EAID--CITQ----GRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQA 316
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 5e-06
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 360 KVVVGRGSGM---GAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYA 416
KV + + +VAV+ L E + R +DF+ E E + +QH +IVR
Sbjct: 56 KVFLAECHNLLPEQDKMLVAVKALKEASESAR-QDFQREAELLTMLQHQHIVRFFGVCTE 114
Query: 417 NDEKLLISDFIRNGSL 432
L++ +++R+G L
Sbjct: 115 GRPLLMVFEYMRHGDL 130
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 5e-07
Identities = 26/107 (24%), Positives = 42/107 (39%), Gaps = 19/107 (17%)
Query: 475 APEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLS 533
+PE+ G FT DV+SFG+VL EI T P G N+ + V + +P
Sbjct: 208 SPESLKDG-VFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE--QVLRFVMEGGLLDKPD- 263
Query: 534 EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580
+ + F + C + +P+ RP + S+
Sbjct: 264 -----------NCPDML---FELMRMCWQYNPKMRPSFLEIISSIKE 296
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 3e-05
Identities = 16/77 (20%), Positives = 31/77 (40%)
Query: 356 GIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYY 415
G++Y+ V T VA++ + E + +F +E + ++VRL
Sbjct: 39 GMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 98
Query: 416 ANDEKLLISDFIRNGSL 432
L+I + + G L
Sbjct: 99 QGQPTLVIMELMTRGDL 115
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 49.7 bits (119), Expect = 7e-07
Identities = 42/134 (31%), Positives = 55/134 (41%), Gaps = 12/134 (8%)
Query: 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNA-TNLVYLDLAHNSFC 126
LYL + +T P L +L L L SN +P +F++ T L LDL N
Sbjct: 43 QILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGA-LPVGVFDSLTQLTVLDLGTNQL- 100
Query: 127 GPIPDRI-KTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHF 185
+P + L +L L + N L LP + L LT L L NQ IP G F
Sbjct: 101 TVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLT-HLALDQNQLK-SIPH--GAF 155
Query: 186 PVMVSLD---LRNN 196
+ SL L N
Sbjct: 156 DRLSSLTHAYLFGN 169
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 4e-06
Identities = 31/112 (27%), Positives = 45/112 (40%), Gaps = 12/112 (10%)
Query: 92 TRLSLASNNFSKPIPANLFNA-TNLVYLDLAHN---SFCGPIPDRIKTLKNLTHLDLSSN 147
L L N +K + +F++ NL L L N + + D L LT LDL +N
Sbjct: 43 QILYLHDNQITK-LEPGVFDSLINLKELYLGSNQLGALPVGVFDS---LTQLTVLDLGTN 98
Query: 148 LLNGSLPEFLLD-LRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNL 198
L LP + D L L L + N+ + +P + L L N L
Sbjct: 99 QLT-VLPSAVFDRLVHLK-ELFMCCNKLTE-LPRGIERLTHLTHLALDQNQL 147
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 7e-07
Identities = 49/260 (18%), Positives = 76/260 (29%), Gaps = 79/260 (30%)
Query: 356 GIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFK-DFESEVEAIARV-QHPNIVRLKAF 413
G ++KV + G + AV+R + + +EV + +V QHP VRL+
Sbjct: 71 GEVFKVR-SKEDGR----LYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLE-Q 124
Query: 414 YYANDEKLLI---------SDFI-RNGSL--------YAA--------LHGFGL------ 441
+ L + G+ Y LH GL
Sbjct: 125 AWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVK 184
Query: 442 --NRLLP----------GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKC 489
N L G G Y+APE + +
Sbjct: 185 PANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDP------RYMAPE--LLQGSYGTAA 236
Query: 490 DVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQ 549
DV+S G+ +LE+ P G+G + L + + + L R
Sbjct: 237 DVFSLGLTILEVACNMEL---PHG-GEGWQQLRQGYLPP--EFTAGLSSEL-------RS 283
Query: 550 VLATFHIALNCTELDPEFRP 569
VL E DP+ R
Sbjct: 284 VLV------MMLEPDPKLRA 297
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 7e-07
Identities = 24/110 (21%), Positives = 43/110 (39%), Gaps = 23/110 (20%)
Query: 475 APEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPL- 532
A E+ +T K DV++FG+ + EI T G P G +N + + R ++P
Sbjct: 217 AIESLADR-VYTSKSDVWAFGVTMWEIATRGMTPYPGVQN--HEMYDYLLHGHRLKQPED 273
Query: 533 -SEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
+ + + I +C DP RP + L+++
Sbjct: 274 CLDEL-----------------YEIMYSCWRTDPLDRPTFSVLRLQLEKL 306
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 1e-04
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
Query: 370 GAPTVVAVRRLTEGDATWR-FKDFESEVEAIARVQHPNIVRL-----KAFYYANDEKLLI 423
G VAV+ + +++ R ++F SE + HPN++RL + + ++I
Sbjct: 60 GTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVI 119
Query: 424 SDFIRNGSL 432
F++ G L
Sbjct: 120 LPFMKYGDL 128
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 49.9 bits (120), Expect = 1e-06
Identities = 38/138 (27%), Positives = 56/138 (40%), Gaps = 36/138 (26%)
Query: 439 FGLNR-LLPGTSKVTKNETIVTSGTGSRISAISNVYLAPE-ARIYGSKFTQKCDVYSFGI 496
FG+ R + + VT+ ++ GT YL+PE AR G + DVYS G
Sbjct: 160 FGIARAIADSGNSVTQTAAVI--GTAQ--------YLSPEQAR--GDSVDARSDVYSLGC 207
Query: 497 VLLEILTGRLPDAGPENDGKGLESLVRKAFR----ERRPLSEVIDPALVKEIHAKRQVLA 552
VL E+LTG P G +S V A++ + P S L ++ A
Sbjct: 208 VLYEVLTGEPPFTG--------DSPVSVAYQHVREDPIPPSA-RHEGLSADLDA------ 252
Query: 553 TFHIALNCTELDPEFRPR 570
+ L +PE R +
Sbjct: 253 ---VVLKALAKNPENRYQ 267
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 49.5 bits (119), Expect = 1e-06
Identities = 26/106 (24%), Positives = 44/106 (41%), Gaps = 19/106 (17%)
Query: 475 APEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLS 533
APEA +YG KF+ D++S+G+VL E+ + G P G N + + ++R P
Sbjct: 198 APEAIMYG-KFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN--QDVVEMIRNRQVLPCP-- 252
Query: 534 EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579
++ + + C P RPR + + L
Sbjct: 253 ----DDCPAWVY---------ALMIECWNEFPSRRPRFKDIHSRLR 285
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 2e-05
Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
Query: 360 KVVVGRGSGM---GAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYA 416
KV G G VA++ L + ++F E AR+QHPN+V L
Sbjct: 24 KVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTK 83
Query: 417 NDEKLLISDFIRNGSL 432
+ +I + +G L
Sbjct: 84 DQPLSMIFSYCSHGDL 99
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 49.5 bits (119), Expect = 1e-06
Identities = 35/158 (22%), Positives = 57/158 (36%), Gaps = 55/158 (34%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKL-LISDFIRNGSLY-------------AA----- 435
E+E + ++HPNI+R+ Y+ + +++ L+ +F G LY +A
Sbjct: 64 EIEIQSHLRHPNILRMY-NYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEE 122
Query: 436 -------LHGFGL--------NRLLP----------GTSKVTKNETIVTS-GTGSRISAI 469
H + N L+ G S + T GT
Sbjct: 123 LADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRTMCGTLD----- 177
Query: 470 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 507
YL PE I G +K D++ G++ E L G P
Sbjct: 178 ---YLPPEM-IEGKTHDEKVDLWCAGVLCYEFLVGMPP 211
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 1e-06
Identities = 25/93 (26%), Positives = 35/93 (37%), Gaps = 4/93 (4%)
Query: 107 ANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGT 166
A NA LDL I + TL +D S N + L + LR L T
Sbjct: 13 AQYTNAVRDRELDLRGYKI-PVIENLGATLDQFDAIDFSDNEIR-KL-DGFPLLRRLK-T 68
Query: 167 LNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLS 199
L ++ N+ + P + L L NN+L
Sbjct: 69 LLVNNNRICRIGEGLDQALPDLTELILTNNSLV 101
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 8e-06
Identities = 27/110 (24%), Positives = 44/110 (40%), Gaps = 9/110 (8%)
Query: 66 RVTSLYLPNRNLTGYMPSELG-LLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNS 124
R L L + + LG L+ + S+N + + L L + +N
Sbjct: 20 RDRELDLRGYKIP--VIENLGATLDQFDAIDF-SDNEIRKL-DGFPLLRRLKTLLVNNNR 75
Query: 125 FCGPIPDRIKTLKNLTHLDLSSNLLN--GSLPEFLLDLRALTGTLNLSFN 172
C + L +LT L L++N L G L + L L++LT L + N
Sbjct: 76 ICRIGEGLDQALPDLTELILTNNSLVELGDL-DPLASLKSLT-YLCILRN 123
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 39.6 bits (93), Expect = 9e-04
Identities = 18/84 (21%), Positives = 30/84 (35%), Gaps = 6/84 (7%)
Query: 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKP-IPANLFNATNLVYLDLAHN 123
R+ +L + N + L LT L L +N+ + L + +L YL + N
Sbjct: 64 RRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRN 123
Query: 124 SFCGPIPD-R---IKTLKNLTHLD 143
R I + + LD
Sbjct: 124 PVTN-KKHYRLYVIYKVPQVRVLD 146
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 2e-06
Identities = 39/210 (18%), Positives = 69/210 (32%), Gaps = 68/210 (32%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAV-----RRLTEGDATWRFKDFESEVEAIARVQ 403
+G G + + + + A+ ++ EV + +
Sbjct: 44 KLGSGAYGEVLLCR-DKVTHV----ERAIKIIRKTSVSTSS----NSKLLEEVAVLKLLD 94
Query: 404 HPNIVRLKAFYYANDEKLLISDFIRNGSLY-------------------------AALHG 438
HPNI++L F+ L+ + + G L+ LH
Sbjct: 95 HPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHK 154
Query: 439 FGL--------NRLLP-------------GTSKVTKNETIVTSGTGSRISAISNVYLAPE 477
+ N LL G S V +N+ + G+ Y+APE
Sbjct: 155 HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAY------YIAPE 208
Query: 478 ARIYGSKFTQKCDVYSFGIVLLEILTGRLP 507
+ K+ +KCDV+S G++L +L G P
Sbjct: 209 --VLRKKYDEKCDVWSIGVILFILLAGYPP 236
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 2e-06
Identities = 23/107 (21%), Positives = 43/107 (40%), Gaps = 19/107 (17%)
Query: 475 APEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLS 533
PE+ Y ++T + DV+++G+VL EI + G P G ++ + VR P
Sbjct: 244 PPESIFYN-RYTTESDVWAYGVVLWEIFSYGLQPYYGMAHE--EVIYYVRDGNILACPE- 299
Query: 534 EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580
+ ++ +++ C P RP ++ L R
Sbjct: 300 -----------NCPLEL---YNLMRLCWSKLPADRPSFCSIHRILQR 332
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 5e-06
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 360 KVVVGRGSGM---GAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYA 416
+V R G+ T+VAV+ L E + DF+ E +A +PNIV+L
Sbjct: 62 RVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV 121
Query: 417 NDEKLLISDFIRNGSL 432
L+ +++ G L
Sbjct: 122 GKPMCLLFEYMAYGDL 137
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504 | Back alignment and structure |
|---|
Score = 49.7 bits (119), Expect = 2e-06
Identities = 32/164 (19%), Positives = 58/164 (35%), Gaps = 54/164 (32%)
Query: 390 KDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLY---------------- 433
++ +E+ + + HPNI++L + L+++F G L+
Sbjct: 91 EEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAAN 150
Query: 434 ---------AALHGFGL--------NRLLP-------------GTSKVTKNETIVTSGTG 463
LH + N LL G S + + G
Sbjct: 151 IMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLG 210
Query: 464 SRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 507
+ Y+APE + K+ +KCDV+S G+++ +L G P
Sbjct: 211 TAY------YIAPE--VLKKKYNEKCDVWSCGVIMYILLCGYPP 246
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 2e-06
Identities = 40/261 (15%), Positives = 67/261 (25%), Gaps = 97/261 (37%)
Query: 390 KDFESEVEAIARVQHPNIVRLKAFY------------YANDEKLLI----------SDFI 427
SEV +A + H +VR A + L I D I
Sbjct: 47 STILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLI 106
Query: 428 RNGSLY-----AA------------LHG-------------------------FGLNRLL 445
+ +L +H FGL + +
Sbjct: 107 HSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNV 166
Query: 446 PGTSKVTKNETIVTSGTGSRISAISNV----YLAPE----ARIYGSKFTQKCDVYSFGIV 497
+ + K ++ G+ ++ S + Y+A E Y +K D+YS GI+
Sbjct: 167 HRSLDILKLDSQNLPGSSDNLT--SAIGTAMYVATEVLDGTGHYN----EKIDMYSLGII 220
Query: 498 LLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIA 557
E++ L+ L + + K I
Sbjct: 221 FFEMIYPFSTG---MERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIR------------ 265
Query: 558 LNCTELDPEFRPRMRTVSESL 578
+ DP RP L
Sbjct: 266 -LLIDHDPNKRP---GARTLL 282
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 2e-06
Identities = 31/147 (21%), Positives = 50/147 (34%), Gaps = 35/147 (23%)
Query: 439 FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVL 498
FGL R+L + K T V GT Y++PE ++ + +K D++S G +L
Sbjct: 160 FGLARILNHDTSFAK--TFV--GTPY--------YMSPE-QMNRMSYNEKSDIWSLGCLL 206
Query: 499 LEILTGRLPDAGPENDGKGLESLVRKAFRER-RPLSEVIDPALVKEIHAKRQVLATFHIA 557
E+ P + L K + R + L + I
Sbjct: 207 YELCALMPP-----FTAFSQKELAGKIREGKFRRIPYRYSDELNEIITR----------- 250
Query: 558 LNCTELDPEFRPRMRTVSESLDRVKLQ 584
L RP +V E L+ +
Sbjct: 251 --MLNLKDYHRP---SVEEILENPLIL 272
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 2e-06
Identities = 32/164 (19%), Positives = 57/164 (34%), Gaps = 54/164 (32%)
Query: 390 KDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLY---------------- 433
+ EV+ + ++ HPNI++L F+ L+ + G L+
Sbjct: 71 ESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR 130
Query: 434 ---------AALHGFGL--------NRLLP-------------GTSKVTKNETIVTSGTG 463
+H + N LL G S + + G
Sbjct: 131 IIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIG 190
Query: 464 SRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 507
+ Y+APE + + +KCDV+S G++L +L+G P
Sbjct: 191 TAY------YIAPE--VLHGTYDEKCDVWSTGVILYILLSGCPP 226
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 3e-06
Identities = 40/210 (19%), Positives = 68/210 (32%), Gaps = 68/210 (32%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAV-----RRLTEGDATWRFKDFESEVEAIARVQ 403
++GK G + K R + AV D EVE + ++
Sbjct: 29 MLGKGSFGEVLKCK-DRITQQ----EYAVKVINKASAKNKD----TSTILREVELLKKLD 79
Query: 404 HPNIVRLKAFYYANDEKLLISDFIRNGSLY-------------------------AALHG 438
HPNI++L + ++ + G L+ +H
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK 139
Query: 439 FGL--------NRLLP-------------GTSKVTKNETIVTSGTGSRISAISNVYLAPE 477
+ N LL G S + T + G+ Y+APE
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAY------YIAPE 193
Query: 478 ARIYGSKFTQKCDVYSFGIVLLEILTGRLP 507
+ + +KCDV+S G++L +L+G P
Sbjct: 194 --VLRGTYDEKCDVWSAGVILYILLSGTPP 221
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
Score = 49.1 bits (117), Expect = 3e-06
Identities = 43/241 (17%), Positives = 74/241 (30%), Gaps = 70/241 (29%)
Query: 359 YKV--VVGRGSGMGAPTV------------VAVRRL-TEGDATWRFKDFESEVEAIARVQ 403
Y+V + G G+G + V ++ L GDA + +E + +A V
Sbjct: 82 YEVKGCIAHG-GLG--WIYLALDRNVNGRPVVLKGLVHSGDAEAQ-AMAMAERQFLAEVV 137
Query: 404 HPNIVRLKAFYYANDEKLLISDFI-------------RNGSL---------------YAA 435
HP+IV++ F D +I + L +
Sbjct: 138 HPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSY 197
Query: 436 LHGFGL--------NRLL-PGTSKVT---KNETIVTSGTGSRISAISNVYLAPE-ARIYG 482
LH GL N +L K+ V+ + + APE R
Sbjct: 198 LHSIGLVYNDLKPENIMLTEEQLKLIDLG----AVSRINSFGYLYGTPGFQAPEIVR--- 250
Query: 483 SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVK 542
+ T D+Y+ G L + G DG + V + ++ A+
Sbjct: 251 TGPTVATDIYTVGRTLAALTLDLPTRNGRYVDGLPEDDPV---LKTYDSYGRLLRRAIDP 307
Query: 543 E 543
+
Sbjct: 308 D 308
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 3e-06
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 8/111 (7%)
Query: 68 TSLYLPNRNLTGYMPSEL-GLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNSF 125
T L L + L L G L L +L L N + I N F A+++ L L N
Sbjct: 32 TELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTG-IEPNAFEGASHIQELQLGENKI 90
Query: 126 CGPIPDRI-KTLKNLTHLDLSSNLLNGSLPEFLLD-LRALTGTLNLSFNQF 174
I +++ L L L+L N ++ + + L +LT +LNL+ N F
Sbjct: 91 -KEISNKMFLGLHQLKTLNLYDNQIS-CVMPGSFEHLNSLT-SLNLASNPF 138
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 48.1 bits (114), Expect = 4e-06
Identities = 20/141 (14%), Positives = 35/141 (24%), Gaps = 29/141 (20%)
Query: 396 VEAIARVQHPNIV--RLKAFYYANDEKLLISDFIRNGSLYAALHGFGLNRLLPGTSKVTK 453
+ A +Q +V + L I +G L
Sbjct: 204 IRLAANLQSKGLVHGHFT------PDNLFIMP---DGRLMLG--DVSA------------ 240
Query: 454 NETIVTSGTGSRISAISNVYLAPE-ARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPE 512
+ GT S++ Y E + FT + + G+ + + LP
Sbjct: 241 ---LWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVT 297
Query: 513 NDGKGLESLVRKAFRERRPLS 533
KG L+
Sbjct: 298 PGIKGSWKRPSLRVPGTDSLA 318
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 46.9 bits (111), Expect = 1e-05
Identities = 23/151 (15%), Positives = 46/151 (30%), Gaps = 44/151 (29%)
Query: 396 VEAIARVQHPNIV--RLKAFYYANDEKLLISDFIRNGSLYAALHGFGLNRLLPGTSKVTK 453
+ +A + H +V L+ +++ + G ++ L GF V
Sbjct: 216 IRLLASLHHYGLVHTYLR------PVDIVLD---QRGGVF--LTGFEH--------LVRD 256
Query: 454 NETIVTSGTGSRISAISNVYLAPE----------ARIYGSKFTQKCDVYSFGIVLLEILT 503
+V+S + + PE R + T D ++ G+V+ I
Sbjct: 257 GARVVSSVS--------RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWC 308
Query: 504 GRLPDAGPENDGKGLESLVRKAFRERRPLSE 534
LP FR + + +
Sbjct: 309 ADLPI-----TKDAALGGSEWIFRSCKNIPQ 334
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360 | Back alignment and structure |
|---|
Score = 46.8 bits (111), Expect = 1e-05
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEND 514
Y++PE R+ G+ ++ + D++S G+ L+E+ GR P P+
Sbjct: 196 YMSPE-RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAK 236
|
| >1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 2e-05
Identities = 34/165 (20%), Positives = 59/165 (35%), Gaps = 63/165 (38%)
Query: 394 SEVEAIARVQHPNIVRLKAFYYANDEKL-LISDFIRNGSL-----------------YAA 435
E + ++R+ HP V+L F + +DEKL + +NG L Y A
Sbjct: 79 RERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 137
Query: 436 --------LHG-------------------------FGLNRLLPGTSKVTKNETIVTSGT 462
LHG FG ++L SK + + V GT
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV--GT 195
Query: 463 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 507
Y++PE + + D+++ G ++ +++ G P
Sbjct: 196 AQ--------YVSPEL-LTEKSACKSSDLWALGCIIYQLVAGLPP 231
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 2e-05
Identities = 30/165 (18%), Positives = 53/165 (32%), Gaps = 34/165 (20%)
Query: 419 EKLLISDFIRNGSLYAALHGFGL-NRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPE 477
+LIS +G + A + FGL +L G ++ + GT ++APE
Sbjct: 147 HNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVP--GTEG--------WIAPE 196
Query: 478 --ARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEV 535
+ T D++S G V +++ G + L + P
Sbjct: 197 MLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHE 256
Query: 536 IDPA--LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 578
A L++ +DP+ RP + L
Sbjct: 257 DVIARELIE----------------KMIAMDPQKRP---SAKHVL 282
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 45.8 bits (108), Expect = 3e-05
Identities = 9/66 (13%), Positives = 20/66 (30%), Gaps = 9/66 (13%)
Query: 473 YLAPE----ARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE 528
A + + + T D ++ G+ + I LP+ FR
Sbjct: 278 TTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDA-----ALGGSEWIFRS 332
Query: 529 RRPLSE 534
+ + +
Sbjct: 333 CKNIPQ 338
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 3e-05
Identities = 39/111 (35%), Positives = 49/111 (44%), Gaps = 13/111 (11%)
Query: 92 TRLSLASNNFSKPIPANLFNA-TNLVYLDLAHNSFCGPIPDRI-KTLKNLTHLDLSSNLL 149
TRL L SN +P +F+ T L L L+ N +PD + L LT L L N L
Sbjct: 31 TRLELESNKLQS-LPHGVFDKLTQLTKLSLSQNQI-QSLPDGVFDKLTKLTILYLHENKL 88
Query: 150 NGSLPEFLLD-LRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLD---LRNN 196
SLP + D L L L L NQ +P+ G F + SL L N
Sbjct: 89 Q-SLPNGVFDKLTQLK-ELALDTNQLKS-VPD--GIFDRLTSLQKIWLHTN 134
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 7e-05
Identities = 33/167 (19%), Positives = 64/167 (38%), Gaps = 57/167 (34%)
Query: 390 KDFESEVEAIARVQHPNIVRLKAFYYANDEKL-LISDFIRNGSLY--------------- 433
+ E+E+E + ++ HP I+++K F+ + E ++ + + G L+
Sbjct: 185 LNVETEIEILKKLNHPCIIKIKNFF--DAEDYYIVLELMEGGELFDKVVGNKRLKEATCK 242
Query: 434 ----------AALHGFGL--------NRLLP-------------GTSKVTKNETIVTSGT 462
LH G+ N LL G SK+ +++ +
Sbjct: 243 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 302
Query: 463 GSRISAISNVYLAPE--ARIYGSKFTQKCDVYSFGIVLLEILTGRLP 507
G+ YLAPE + + + + D +S G++L L+G P
Sbjct: 303 GTP------TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 343
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 7e-05
Identities = 38/207 (18%), Positives = 75/207 (36%), Gaps = 68/207 (32%)
Query: 360 KVVVGRGS------GMGAPT--VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLK 411
+VV+G+G+ G +A++ + E D+ + E+ ++H NIV+
Sbjct: 27 RVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSR-YSQPLHEEIALHKHLKHKNIVQ-- 83
Query: 412 AFYY---ANDEKLLIS-DFIRNGSLYAAL-HGFGLNRLLPGTSKVTKNET---------- 456
Y + + + I + + GSL A L +G L + T
Sbjct: 84 --YLGSFSENGFIKIFMEQVPGGSLSALLRSKWG---PLKDNEQTIGFYTKQILEGLKYL 138
Query: 457 ---------------IVTSGTGS----------RISAISNV---------YLAPEARIYG 482
++ + +G R++ I+ Y+APE I
Sbjct: 139 HDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEI-IDK 197
Query: 483 SK--FTQKCDVYSFGIVLLEILTGRLP 507
+ + D++S G ++E+ TG+ P
Sbjct: 198 GPRGYGKAADIWSLGCTIIEMATGKPP 224
|
| >3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 8e-05
Identities = 57/211 (27%), Positives = 77/211 (36%), Gaps = 81/211 (38%)
Query: 362 VVGRGS-GMGAPTVVAVRRLTEGDATWRF------KDF---ESEVEAIA------RVQHP 405
V+G+GS G V V++++ DA + K V V HP
Sbjct: 31 VLGQGSFG----KVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHP 86
Query: 406 NIVRLKAFYYA--NDEKL-LISDFIRNGSL-----------------YAA--------LH 437
IV+L YA + KL LI DF+R G L Y A LH
Sbjct: 87 FIVKLH---YAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 143
Query: 438 GFGL--------NRLLP----------GTSKVTKNETIVTS---GTGSRISAISNVYLAP 476
G+ N LL G SK + + GT Y+AP
Sbjct: 144 SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVE--------YMAP 195
Query: 477 EARIYGSKFTQKCDVYSFGIVLLEILTGRLP 507
E + TQ D +SFG+++ E+LTG LP
Sbjct: 196 EV-VNRRGHTQSADWWSFGVLMFEMLTGTLP 225
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 44.0 bits (104), Expect = 8e-05
Identities = 38/225 (16%), Positives = 67/225 (29%), Gaps = 61/225 (27%)
Query: 336 SLELEDLLRASAYVVGKSKNGIMYKVVVGRGS------GMGAPT--VVAVRRLTEGDATW 387
+ L + L+ Y + + + ++ VGRGS T AV+++
Sbjct: 39 GVLLTEKLKPVDYEYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR- 97
Query: 388 RFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHGFGL------ 441
E+ A A + P IV L + + + GSL + G
Sbjct: 98 -----VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRA 152
Query: 442 ---------------------------NRLLP-----------GTSKVTKNETIVTSGTG 463
N LL G + + + + S
Sbjct: 153 LYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLL- 211
Query: 464 SRISAISNVY-LAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 507
+ +APE + G K D++S ++L +L G P
Sbjct: 212 TGDYIPGTETHMAPEV-VMGKPCDAKVDIWSSCCMMLHMLNGCHP 255
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 43.8 bits (103), Expect = 1e-04
Identities = 9/85 (10%), Positives = 29/85 (34%), Gaps = 1/85 (1%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
++G+ +Y+ G + ++ + W F +E + +
Sbjct: 72 LLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANP-WEFYIGTQLMERLKPSMQHMFM 130
Query: 409 RLKAFYYANDEKLLISDFIRNGSLY 433
+ + + + +L+ + G+L
Sbjct: 131 KFYSAHLFQNGSVLVGELYSYGTLL 155
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 41.1 bits (96), Expect = 7e-04
Identities = 8/56 (14%), Positives = 16/56 (28%), Gaps = 1/56 (1%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE 528
+ E + + + D + + +L G E E L R+
Sbjct: 251 FQCVEM-LSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPEGLFRRLPHL 305
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 42.9 bits (101), Expect = 2e-04
Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 13/72 (18%)
Query: 439 FGLNRLL------PGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVY 492
FGL + T G+++ Y++PE +I+G+ ++ K D++
Sbjct: 208 FGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL------YMSPE-QIHGNNYSHKVDIF 260
Query: 493 SFGIVLLEILTG 504
S G++L E+L
Sbjct: 261 SLGLILFELLYS 272
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 2e-04
Identities = 25/136 (18%), Positives = 43/136 (31%), Gaps = 36/136 (26%)
Query: 439 FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVL 498
FGL L K T GT Y++PE I + ++ D+Y+ G++L
Sbjct: 166 FGLVTSLKNDGKRT---RSK--GTLR--------YMSPEQ-ISSQDYGKEVDLYALGLIL 211
Query: 499 LEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIAL 558
E+L + + +R +S++ D +
Sbjct: 212 AELLHV----CDTAFETSKFFTDLRD-----GIISDIFDKKEKTLLQ------------- 249
Query: 559 NCTELDPEFRPRMRTV 574
PE RP +
Sbjct: 250 KLLSKKPEDRPNTSEI 265
|
| >3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695 | Back alignment and structure |
|---|
Score = 43.3 bits (102), Expect = 2e-04
Identities = 32/156 (20%), Positives = 49/156 (31%), Gaps = 54/156 (34%)
Query: 397 EAIARVQHPNIVRLKAFYYANDEKL-LISDFIRNGSL-----------------YAA--- 435
++ P IV + + + +KL I D + G L YAA
Sbjct: 244 SLVSTGDCPFIVCMS-YAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEII 302
Query: 436 -----LHGFGL--------NRLLP----------GTSKVTKNETIVTS-GTGSRISAISN 471
+H + N LL G + + S GT
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHG------- 355
Query: 472 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 507
Y+APE G + D +S G +L ++L G P
Sbjct: 356 -YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 2e-04
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Query: 473 YLAPEARI----YGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVR 523
Y+APE RI ++ K D++S GI ++E+ R P + L+ +V
Sbjct: 175 YMAPE-RINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE 228
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 2e-04
Identities = 35/166 (21%), Positives = 57/166 (34%), Gaps = 58/166 (34%)
Query: 390 KDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLY-------------AA- 435
EVE + ++ HPNI++L + ++ + G L+ AA
Sbjct: 66 STILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR 125
Query: 436 -----------LHGFGL--------NRLLP-------------GTSKVTKNETIVTSGTG 463
+H + N LL G S + T + G
Sbjct: 126 IIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIG 185
Query: 464 SRISAISNVYLAPE--ARIYGSKFTQKCDVYSFGIVLLEILTGRLP 507
+ Y+APE Y +KCDV+S G++L +L+G P
Sbjct: 186 TAY------YIAPEVLRGTYD----EKCDVWSAGVILYILLSGTPP 221
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 3e-04
Identities = 15/59 (25%), Positives = 26/59 (44%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
+ R+ ++ E EV + +V HPNI+ L Y + +LI + + G L
Sbjct: 44 FIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGEL 102
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327 | Back alignment and structure |
|---|
Score = 42.1 bits (100), Expect = 3e-04
Identities = 39/157 (24%), Positives = 56/157 (35%), Gaps = 61/157 (38%)
Query: 400 ARVQHPNIVRLKAFYYA--NDEKL-LISDFIRNGSL-----------------YAA---- 435
V+HP IV L YA KL LI +++ G L Y A
Sbjct: 76 EEVKHPFIVDLI---YAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISM 132
Query: 436 ----LHGFGL--------NRLLP----------GTSKVTKNETIVTS---GTGSRISAIS 470
LH G+ N +L G K + ++ VT GT
Sbjct: 133 ALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIE------ 186
Query: 471 NVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 507
Y+APE + S + D +S G ++ ++LTG P
Sbjct: 187 --YMAPEI-LMRSGHNRAVDWWSLGALMYDMLTGAPP 220
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 4e-04
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 6/47 (12%)
Query: 473 YLAPEARI-----YGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEND 514
Y+APE RI + + DV+S GI L+E+ TG+ P + D
Sbjct: 190 YMAPE-RIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD 235
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389 | Back alignment and structure |
|---|
Score = 42.2 bits (99), Expect = 4e-04
Identities = 35/184 (19%), Positives = 60/184 (32%), Gaps = 49/184 (26%)
Query: 373 TVVAVRRLT-EGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGS 431
V VRR+ E + + E+ HPNIV +A + A++E +++ F+ GS
Sbjct: 53 EYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGS 112
Query: 432 LY----------------AA-----------LHGFGL--------NRLLPGTSKV----- 451
A +H G + L+ KV
Sbjct: 113 AKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGL 172
Query: 452 ------TKNETIVTSGTGSRISAISNVY-LAPE-ARIYGSKFTQKCDVYSFGIVLLEILT 503
+ ++ + L+PE + + K D+YS GI E+
Sbjct: 173 RSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELAN 232
Query: 504 GRLP 507
G +P
Sbjct: 233 GHVP 236
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 4e-04
Identities = 34/144 (23%), Positives = 54/144 (37%), Gaps = 16/144 (11%)
Query: 58 SGIHCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNA-TNLV 116
L +++T ++ L NS+ ++ +N+ K + N+
Sbjct: 15 DDAFA---ETIKANLKKKSVTD-AVTQNEL-NSIDQIIA-NNSDIKSVQG--IQYLPNVR 66
Query: 117 YLDLAHNSFCG-PIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLD-LRALTGTLNLSFNQF 174
YL L N L NLT+L L+ N L SLP + D L L L L NQ
Sbjct: 67 YLALGGNKLHDISALKE---LTNLTYLILTGNQLQ-SLPNGVFDKLTNLK-ELVLVENQL 121
Query: 175 SGQIPEMYGHFPVMVSLDLRNNNL 198
++ + L+L +N L
Sbjct: 122 QSLPDGVFDKLTNLTYLNLAHNQL 145
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 5e-04
Identities = 13/59 (22%), Positives = 25/59 (42%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
+ R+ ++ E EV + +V H N++ L Y + +LI + + G L
Sbjct: 44 FIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGEL 102
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277 | Back alignment and structure |
|---|
Score = 41.0 bits (97), Expect = 5e-04
Identities = 32/166 (19%), Positives = 58/166 (34%), Gaps = 58/166 (34%)
Query: 390 KDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLY-------------AA- 435
F+ E+E + + HPNI+RL + N + L+ + G L+ AA
Sbjct: 51 DRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAAR 110
Query: 436 -----------LHGFGL--------NRLLP-------------GTSKVTKNETIVTSGTG 463
H + N L G + K ++ + G
Sbjct: 111 IMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVG 170
Query: 464 SRISAISNVYLAPE--ARIYGSKFTQKCDVYSFGIVLLEILTGRLP 507
+ Y++P+ +YG +CD +S G+++ +L G P
Sbjct: 171 TPY------YVSPQVLEGLYG----PECDEWSAGVMMYVLLCGYPP 206
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 7e-04
Identities = 26/127 (20%), Positives = 48/127 (37%), Gaps = 18/127 (14%)
Query: 90 SLTRLSLASNNFSKPIPANLFNA-----TNLVYLDLAHNSF----CGPIPDRIKTL-KNL 139
S+T L+L N+ L N+ L+L N+ C + + ++ ++
Sbjct: 139 SITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASV 198
Query: 140 THLDLSSNLLNGS----LPEFLLDLRALTGTLNLSFNQFSGQ----IPEMYGHFPVMVSL 191
T LDLS+NLL L + +LNL N G + + + ++
Sbjct: 199 TSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTV 258
Query: 192 DLRNNNL 198
L + +
Sbjct: 259 YLDYDIV 265
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 7e-04
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 5/39 (12%)
Query: 473 YLAPEARI----YGSKFTQKCDVYSFGIVLLEILTGRLP 507
Y+APE RI + + DV+S GI L E+ TGR P
Sbjct: 191 YMAPE-RIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 584 | |||
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 99.98 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 99.98 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 99.98 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 99.98 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 99.98 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 99.97 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 99.97 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 99.97 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 99.97 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 99.97 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 99.97 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 99.97 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 99.97 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 99.97 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 99.97 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 99.97 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 99.97 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 99.97 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 99.97 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 99.97 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 99.97 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 99.97 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 99.97 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 99.97 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 99.97 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 99.97 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 99.97 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 99.97 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 99.97 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 99.97 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 99.97 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 99.97 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.97 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 99.97 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 99.97 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 99.97 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 99.97 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 99.97 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 99.97 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 99.97 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 99.97 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 99.97 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 99.97 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 99.97 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 99.97 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 99.97 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 99.97 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 99.97 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 99.97 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 99.97 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 99.97 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 99.97 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 99.97 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 99.97 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 99.97 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 99.97 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 99.97 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 99.97 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 99.97 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 99.97 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 99.97 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 99.97 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 99.97 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 99.97 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 99.97 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 99.97 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 99.97 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 99.97 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 99.97 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 99.97 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 99.97 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 99.96 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 99.96 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 99.96 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 99.96 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 99.96 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 99.96 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 99.96 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 99.96 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 99.96 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 99.96 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 99.96 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.96 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 99.96 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 99.96 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 99.96 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 99.96 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 99.96 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 99.96 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 99.96 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 99.96 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 99.96 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 99.96 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 99.96 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 99.96 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 99.96 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 99.96 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 99.96 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 99.96 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 99.96 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 99.96 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 99.96 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 99.96 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 99.96 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 99.96 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 99.96 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 99.96 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 99.96 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 99.96 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 99.96 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 99.96 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 99.96 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 99.96 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 99.96 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 99.96 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 99.96 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 99.96 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 99.96 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 99.96 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 99.96 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 99.96 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 99.96 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 99.96 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 99.96 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 99.96 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 99.96 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 99.96 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 99.96 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 99.96 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 99.96 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 99.96 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 99.96 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 99.96 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 99.96 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 99.96 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 99.96 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 99.96 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 99.96 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 99.96 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 99.96 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 99.96 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 99.96 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 99.96 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 99.96 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 99.96 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 99.96 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 99.96 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 99.96 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 99.96 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 99.96 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 99.96 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 99.96 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 99.96 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 99.96 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 99.96 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 99.96 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 99.96 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 99.96 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 99.96 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 99.96 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 99.96 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 99.96 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 99.96 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 99.96 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 99.96 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 99.96 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 99.96 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 99.96 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 99.96 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 99.96 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 99.96 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 99.96 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 99.96 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 99.96 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 99.96 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 99.95 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 99.95 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 99.95 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 99.95 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 99.95 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 99.95 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 99.95 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 99.95 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 99.95 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 99.95 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 99.95 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 99.95 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 99.95 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 99.95 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 99.95 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 99.95 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 99.95 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 99.95 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 99.95 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 99.95 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 99.95 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 99.95 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 99.95 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 99.95 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 99.95 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 99.95 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 99.95 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 99.95 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 99.95 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 99.95 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 99.95 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 99.95 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 99.95 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 99.95 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 99.95 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 99.95 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 99.95 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 99.95 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 99.94 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 99.94 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 99.94 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 99.94 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 99.94 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 99.94 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 99.94 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 99.94 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 99.94 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 99.94 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 99.94 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 99.94 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 99.94 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 99.94 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 99.93 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 99.93 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 99.93 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 99.92 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 99.92 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 99.92 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 99.92 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 99.91 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 99.9 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 99.89 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.88 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 99.87 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.86 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.86 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.85 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.85 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.83 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.82 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.81 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.81 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.81 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.81 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.81 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.8 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.8 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.8 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.79 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.79 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 99.79 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.78 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.77 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.77 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.77 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 99.77 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.77 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 99.77 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.77 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.76 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.76 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 99.76 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 99.76 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.76 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 99.76 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.75 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 99.75 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 99.75 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.75 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 99.75 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 99.75 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.74 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 99.74 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.74 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.73 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.73 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 99.73 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 99.73 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.72 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.72 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.72 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.72 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.72 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 99.72 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 99.72 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 99.72 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 99.72 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 99.72 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 99.71 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 99.71 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 99.7 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.7 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.7 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.7 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.69 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.69 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.69 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 99.68 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.68 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 99.68 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.68 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 99.68 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.68 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 99.67 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 99.67 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.67 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.67 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 99.66 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 99.66 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 99.66 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.66 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 99.66 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.65 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.65 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.65 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.65 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 99.63 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 99.63 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 99.63 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 99.62 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 99.62 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 99.62 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 99.62 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.62 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 99.62 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 99.62 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.61 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.61 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 99.6 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.6 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.6 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.59 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 99.59 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.59 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 99.58 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 99.58 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 99.57 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.57 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 99.57 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 99.56 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 99.56 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.54 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.54 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 99.53 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.53 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 99.53 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 99.52 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 99.5 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 99.49 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 99.48 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 99.47 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 99.46 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 99.45 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.45 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 99.43 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 99.43 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 99.43 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.42 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 99.38 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 99.38 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 99.38 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.35 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 99.31 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 99.26 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 99.2 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 99.1 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 99.01 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 98.94 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 98.87 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 98.85 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 98.85 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 98.7 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 98.68 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 98.63 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 98.61 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 98.57 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 98.52 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 98.47 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 98.47 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 98.38 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 98.25 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 98.24 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 98.12 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 97.57 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 97.34 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 97.33 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 97.16 | |
| 4gt6_A | 394 | Cell surface protein; leucine rich repeats, putati | 97.14 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 97.1 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 97.08 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 97.01 | |
| 4gt6_A | 394 | Cell surface protein; leucine rich repeats, putati | 96.94 | |
| 4fs7_A | 394 | Uncharacterized protein; leucine-rich repeats, pro | 96.89 | |
| 4h09_A | 379 | Hypothetical leucine rich repeat protein; two LRR_ | 96.85 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 96.83 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 96.67 | |
| 4fs7_A | 394 | Uncharacterized protein; leucine-rich repeats, pro | 96.38 | |
| 4h09_A | 379 | Hypothetical leucine rich repeat protein; two LRR_ | 96.37 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 96.06 | |
| 2ks1_B | 44 | Epidermal growth factor receptor; ERBB1, ERBB2, tr | 94.04 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 94.03 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 93.31 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 93.04 | |
| 2l2t_A | 44 | Receptor tyrosine-protein kinase ERBB-4; transmemb | 92.81 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 92.48 | |
| 3cxl_A | 463 | N-chimerin; SH2, RHO-GAP, structural genomics cons | 91.65 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 90.27 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 89.69 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 86.54 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 84.71 | |
| 2jwa_A | 44 | Receptor tyrosine-protein kinase ERBB-2; transmemb | 81.78 |
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-42 Score=342.03 Aligned_cols=218 Identities=23% Similarity=0.301 Sum_probs=170.3
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
..+.||+|+||+||+|++.........+.||||+++........++|.+|+.++++++|||||+++|+|.+++..+||||
T Consensus 30 ~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E 109 (308)
T 4gt4_A 30 FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFS 109 (308)
T ss_dssp EEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred EeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEEE
Confidence 35679999999999999854322233389999999876555556889999999999999999999999999999999999
Q ss_pred cccCCcHHHHHhc-------------------------------------------ccccccCCCCccccccCeEEecCC
Q 007935 426 FIRNGSLYAALHG-------------------------------------------FGLNRLLPGTSKVTKNETIVTSGT 462 (584)
Q Consensus 426 y~~~GsL~~~L~~-------------------------------------------~g~~~~~~~~~~i~~~~~~~~~~~ 462 (584)
||++|||.++|+. .-|+|+++.|+.+..+..++..||
T Consensus 110 y~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~~Ki~DF 189 (308)
T 4gt4_A 110 YCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDL 189 (308)
T ss_dssp CCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCS
T ss_pred cCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCCCCEEECCc
Confidence 9999999998842 147889999999888888999998
Q ss_pred Cccc-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhc
Q 007935 463 GSRI-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRE 528 (584)
Q Consensus 463 ~~~~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~ 528 (584)
|.+. ..||+.|||||++.. ..|+.|+|||||||+||||+| |+.||.+.. ..+++......
T Consensus 190 Glar~~~~~~~~~~~~~~~gt~~ymAPE~l~~-~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~-----~~~~~~~i~~~ 263 (308)
T 4gt4_A 190 GLFREVYAADYYKLLGNSLLPIRWMAPEAIMY-GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS-----NQDVVEMIRNR 263 (308)
T ss_dssp CCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCTTTTCC-----HHHHHHHHHTT
T ss_pred ccceeccCCCceeEecccccCCcccCHHHHhC-CCCCccchhhhHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHcC
Confidence 7432 368899999999665 689999999999999999999 899997532 23333333332
Q ss_pred C-CCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 529 R-RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 529 ~-~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
. .+.++.++ ..+.+++.+||+.||++||||.||++.|+++.
T Consensus 264 ~~~~~p~~~~-------------~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 264 QVLPCPDDCP-------------AWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp CCCCCCTTCC-------------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred CCCCCcccch-------------HHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 2 22222222 24566888899999999999999999998764
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-41 Score=339.65 Aligned_cols=218 Identities=23% Similarity=0.353 Sum_probs=171.4
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
..+.||+|+||+||+|++.+.......+.||||+++.. .....++|.+|+++|++++|||||+++|+|.+++..+||||
T Consensus 45 l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~E 123 (329)
T 4aoj_A 45 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA-SESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFE 123 (329)
T ss_dssp EEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC-SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred EEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence 35679999999999999865322223389999999864 33445889999999999999999999999999999999999
Q ss_pred cccCCcHHHHHhc------------------------------------------ccccccCCCCccccccCeEEecCCC
Q 007935 426 FIRNGSLYAALHG------------------------------------------FGLNRLLPGTSKVTKNETIVTSGTG 463 (584)
Q Consensus 426 y~~~GsL~~~L~~------------------------------------------~g~~~~~~~~~~i~~~~~~~~~~~~ 463 (584)
||++|+|.++|+. .-|+|+++.|+.+..+..++..|||
T Consensus 124 y~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~Ki~DFG 203 (329)
T 4aoj_A 124 YMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFG 203 (329)
T ss_dssp CCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC
T ss_pred cCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCcEEEcccc
Confidence 9999999887752 1478899999988888889999988
Q ss_pred ccc-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC
Q 007935 464 SRI-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER 529 (584)
Q Consensus 464 ~~~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~ 529 (584)
.+. ..||+.|||||++.. ..|+.++|||||||++|||+| |+.||.+.. ..+.+.......
T Consensus 204 la~~~~~~~~~~~~~~~~gt~~ymAPE~~~~-~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~-----~~~~~~~i~~g~ 277 (329)
T 4aoj_A 204 MSRDIYSTDYYRVGGRTMLPIRWMPPESILY-RKFTTESDVWSFGVVLWEIFTYGKQPWYQLS-----NTEAIDCITQGR 277 (329)
T ss_dssp ----------------CCCCGGGCCHHHHTT-CCCCHHHHHHHHHHHHHHHHTTSCCTTCSSC-----HHHHHHHHHHTC
T ss_pred cceeccCCCcceecCcccccccccChhhhcC-CCCCccccccchHHHHHHHHcCCCCCCCCCC-----HHHHHHHHHcCC
Confidence 432 358999999999554 789999999999999999999 899997532 233333333322
Q ss_pred -CCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 530 -RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 530 -~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
.+.++.+++ ++.+|+.+||+.||++||||.||++.|+.+..
T Consensus 278 ~~~~p~~~~~-------------~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~ 319 (329)
T 4aoj_A 278 ELERPRACPP-------------EVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 319 (329)
T ss_dssp CCCCCTTCCH-------------HHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CCCCcccccH-------------HHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence 223333333 34568888999999999999999999998753
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-42 Score=336.70 Aligned_cols=217 Identities=22% Similarity=0.355 Sum_probs=170.6
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
..+.||+|+||+||+|++.+.......+.||||+++.. .....++|.+|+++|++++|||||+++|+|.+++..+||||
T Consensus 17 l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~E 95 (299)
T 4asz_A 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA-SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFE 95 (299)
T ss_dssp EEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred EeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC-ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEE
Confidence 35689999999999999865332233389999999864 33445889999999999999999999999999999999999
Q ss_pred cccCCcHHHHHhc----------------------------------------ccccccCCCCccccccCeEEecCCCcc
Q 007935 426 FIRNGSLYAALHG----------------------------------------FGLNRLLPGTSKVTKNETIVTSGTGSR 465 (584)
Q Consensus 426 y~~~GsL~~~L~~----------------------------------------~g~~~~~~~~~~i~~~~~~~~~~~~~~ 465 (584)
||++|+|.++|+. .-|+|+++.|+.+..+..++..|||.+
T Consensus 96 y~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~DFGla 175 (299)
T 4asz_A 96 YMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMS 175 (299)
T ss_dssp CCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCH
T ss_pred cCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCcEEECCcccc
Confidence 9999999988853 147889999998888888999999853
Q ss_pred c-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCC-
Q 007935 466 I-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERR- 530 (584)
Q Consensus 466 ~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~- 530 (584)
. ..||+.|||||++.. ..|+.|+|||||||++|||+| |+.||.+. ...+++........
T Consensus 176 ~~~~~~~~~~~~~~~~gt~~ymAPE~~~~-~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~-----~~~~~~~~i~~~~~~ 249 (299)
T 4asz_A 176 RDVYSTDYYRVGGHTMLPIRWMPPESIMY-RKFTTESDVWSLGVVLWEIFTYGKQPWYQL-----SNNEVIECITQGRVL 249 (299)
T ss_dssp HHHTGGGCEEETTTEEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCTTTTS-----CHHHHHHHHHHTCCC
T ss_pred eecCCCCceeecCceecChhhcCHHHHcC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHHHcCCCC
Confidence 2 258899999999655 689999999999999999999 89999753 22334444433322
Q ss_pred CCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 531 PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 531 ~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
+.++.+++ ++.+++.+||+.||++||||+||++.|+++.
T Consensus 250 ~~p~~~~~-------------~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~ 288 (299)
T 4asz_A 250 QRPRTCPQ-------------EVYELMLGCWQREPHMRKNIKGIHTLLQNLA 288 (299)
T ss_dssp CCCTTCCH-------------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCccchH-------------HHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 22333333 3456888899999999999999999999874
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-41 Score=330.00 Aligned_cols=216 Identities=23% Similarity=0.315 Sum_probs=165.6
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC-CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
..+.||+|+||+||+|++.+ .||||+++.. ......++|.+|+++|++++|||||+++|+|. ++..+|||
T Consensus 40 l~~~iG~G~fG~Vy~~~~~~--------~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-~~~~~iVm 110 (307)
T 3omv_A 40 LSTRIGSGSFGTVYKGKWHG--------DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVT 110 (307)
T ss_dssp EEEECCCCSSSEEEEEESSS--------EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred EeeEEeeCCCcEEEEEEECC--------cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-CCeEEEEE
Confidence 45789999999999998643 5899999754 33344578999999999999999999999885 46789999
Q ss_pred ecccCCcHHHHHhc----------------------------ccccccCCCCccccccCeEEecCCCccc----------
Q 007935 425 DFIRNGSLYAALHG----------------------------FGLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 425 Ey~~~GsL~~~L~~----------------------------~g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
|||++|+|.++|+. .-|+|+++.|+.+..+..++..|||.+.
T Consensus 111 Ey~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~ 190 (307)
T 3omv_A 111 QWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQ 190 (307)
T ss_dssp ECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC---------
T ss_pred EcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecccCCccee
Confidence 99999999888753 2479999999999888888998988432
Q ss_pred ---ccCCCcccCcccccc--CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC-CCccccChhh
Q 007935 467 ---SAISNVYLAPEARIY--GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR-PLSEVIDPAL 540 (584)
Q Consensus 467 ---~~gt~~y~aPE~~~~--~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~d~~~ 540 (584)
.+||+.|||||++.. ...|+.|+|||||||+||||+||+.||.+... ............. +......+.
T Consensus 191 ~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~----~~~~~~~~~~~~~~p~~~~~~~~- 265 (307)
T 3omv_A 191 VEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN----RDQIIFMVGRGYASPDLSKLYKN- 265 (307)
T ss_dssp ---CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC----HHHHHHHHHTTCCCCCSTTSCTT-
T ss_pred ecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCCh----HHHHHHHHhcCCCCCCccccccc-
Confidence 369999999998643 23689999999999999999999999975322 1222222221111 101111111
Q ss_pred hhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 541 VKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 541 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
+...+.+++.+||+.||++||||.||++.|+.++.
T Consensus 266 --------~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~ 300 (307)
T 3omv_A 266 --------CPKAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300 (307)
T ss_dssp --------SCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHT
T ss_pred --------chHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence 12245668889999999999999999999998864
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-39 Score=318.05 Aligned_cols=206 Identities=21% Similarity=0.322 Sum_probs=160.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC-CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEe----CCcee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARVQHPNIVRLKAFYYA----NDEKL 421 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~----~~~~~ 421 (584)
...||+|+||+||+|....++ ..||||++... ......+.|.+|+++|++++|||||+++++|.+ ++..|
T Consensus 31 ~~~iG~G~fg~Vy~a~~~~~~-----~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 105 (290)
T 3fpq_A 31 DIEIGRGSFKTVYKGLDTETT-----VEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTC-----CEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred eeEEecCcCcEEEEEEECCCC-----eEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEE
Confidence 356999999999999988776 89999999764 233345789999999999999999999999976 34589
Q ss_pred EeeecccCCcHHHHH-------------------------hccc----ccccCCCCccccc-cCeEEecCCCcc------
Q 007935 422 LISDFIRNGSLYAAL-------------------------HGFG----LNRLLPGTSKVTK-NETIVTSGTGSR------ 465 (584)
Q Consensus 422 lV~Ey~~~GsL~~~L-------------------------~~~g----~~~~~~~~~~i~~-~~~~~~~~~~~~------ 465 (584)
||||||++|+|.++| |..+ |+|++++|+.+.. ++.++..|||.+
T Consensus 106 lvmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~ 185 (290)
T 3fpq_A 106 LVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS 185 (290)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTT
T ss_pred EEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCC
Confidence 999999999996554 4434 7899999988864 578888888853
Q ss_pred ---cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC--CccccChhh
Q 007935 466 ---ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP--LSEVIDPAL 540 (584)
Q Consensus 466 ---~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~d~~~ 540 (584)
..+||+.|||||++ . ..|+.++|||||||++|||+||+.||.+. .....+.........+ ++...++
T Consensus 186 ~~~~~~GTp~YmAPE~~-~-~~y~~~~DiwSlGvilyelltg~~Pf~~~----~~~~~~~~~i~~~~~~~~~~~~~~~-- 257 (290)
T 3fpq_A 186 FAKAVIGTPEFMAPEMY-E-EKYDESVDVYAFGMCMLEMATSEYPYSEC----QNAAQIYRRVTSGVKPASFDKVAIP-- 257 (290)
T ss_dssp SBEESCSSCCCCCGGGG-G-TCCCTHHHHHHHHHHHHHHHHSSCTTTTC----SSHHHHHHHHTTTCCCGGGGGCCCH--
T ss_pred ccCCcccCccccCHHHc-C-CCCCcHHHHHHHHHHHHHHHHCCCCCCCC----CcHHHHHHHHHcCCCCCCCCccCCH--
Confidence 24799999999985 4 36999999999999999999999999742 2233444443333221 1222223
Q ss_pred hhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 541 VKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 541 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
++.+++.+||+.||++|||++|+++
T Consensus 258 -----------~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 258 -----------EVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp -----------HHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -----------HHHHHHHHHccCChhHCcCHHHHhc
Confidence 3445777899999999999999975
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-40 Score=326.89 Aligned_cols=206 Identities=19% Similarity=0.276 Sum_probs=163.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||+||+|+....+ +.||||+++... .....+.|.+|+++|++++|||||++++++.+++..|||||
T Consensus 29 ~~~lG~G~fg~V~~a~~~~~~-----~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 29 LQKIGEGSFGKAILVKSTEDG-----RQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp EEEC------CEEEEEETTTC-----CEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eEEEecCCCeEEEEEEECCCC-----CEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 467999999999999988766 899999997652 33445789999999999999999999999999999999999
Q ss_pred cccCCcHHHHHhc---------------------------c--cccccCCCCccccccCeEEecCCCccc----------
Q 007935 426 FIRNGSLYAALHG---------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 426 y~~~GsL~~~L~~---------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
||++|+|.++|+. . -|+|++++|+.+..++.++..|||.+.
T Consensus 104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~ 183 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELAR 183 (350)
T ss_dssp CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHHHH
T ss_pred CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecCCccccc
Confidence 9999999877742 2 479999999999888999999998542
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC-CCccccChhhhhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR-PLSEVIDPALVKEI 544 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~d~~~~~~~ 544 (584)
.+||+.|||||++. +..|+.++||||+||++|||+||+.||.+ ....+++........ +.+..+++++
T Consensus 184 ~~~GT~~YmAPE~l~-~~~y~~~~DiwSlGvilyemltG~~PF~~-----~~~~~~~~~i~~~~~~~~~~~~s~~~---- 253 (350)
T 4b9d_A 184 ACIGTPYYLSPEICE-NKPYNNKSDIWALGCVLYELCTLKHAFEA-----GSMKNLVLKIISGSFPPVSLHYSYDL---- 253 (350)
T ss_dssp HHHSCCTTCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSSCSCCC-----SSHHHHHHHHHHTCCCCCCTTSCHHH----
T ss_pred ccCCCccccCHHHHC-CCCCCcHHHHHHHHHHHHHHHHCCCCCCC-----cCHHHHHHHHHcCCCCCCCccCCHHH----
Confidence 36999999999954 57899999999999999999999999974 234455555554432 2333344443
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+++.+||+.||++|||+.|+++
T Consensus 254 ---------~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 254 ---------RSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp ---------HHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---------HHHHHHHccCChhHCcCHHHHhc
Confidence 45677799999999999999975
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-40 Score=326.16 Aligned_cols=223 Identities=20% Similarity=0.255 Sum_probs=162.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCC----ceeE
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAND----EKLL 422 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~----~~~l 422 (584)
.+.||+|+||+||+|++. + +.||||+++..... ...+.+|+..+.+++|||||+++|+|.+++ ..+|
T Consensus 8 ~~~iG~G~fG~Vy~~~~~-g------~~VAvK~l~~~~~~--~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~l 78 (303)
T 3hmm_A 8 QESIGKGRFGEVWRGKWR-G------EEVAVKIFSSREER--SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp EEEEEECSSSEEEEEEET-T------EEEEEEEECGGGHH--HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred EEEEeeCCCeEEEEEEEC-C------EEEEEEEECccchh--hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEE
Confidence 467999999999999984 3 79999999753221 123345666677899999999999998765 4799
Q ss_pred eeecccCCcHHHHHh------------------------c----------ccccccCCCCccccccCeEEecCCCccc--
Q 007935 423 ISDFIRNGSLYAALH------------------------G----------FGLNRLLPGTSKVTKNETIVTSGTGSRI-- 466 (584)
Q Consensus 423 V~Ey~~~GsL~~~L~------------------------~----------~g~~~~~~~~~~i~~~~~~~~~~~~~~~-- 466 (584)
|||||++|+|.++|+ . .-|+|+++.|+.+..+..++..|||.+.
T Consensus 79 V~Ey~~~gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 158 (303)
T 3hmm_A 79 VSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp EEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred EecCCCCCcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence 999999999976654 2 2478899999998888889999988421
Q ss_pred -------------ccCCCcccCccccccC-----CCCCCccchhhHHHHHHHHHhCCCCCCCCCC----------CCCcH
Q 007935 467 -------------SAISNVYLAPEARIYG-----SKFTQKCDVYSFGIVLLEILTGRLPDAGPEN----------DGKGL 518 (584)
Q Consensus 467 -------------~~gt~~y~aPE~~~~~-----~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~----------~~~~l 518 (584)
..||+.|||||++... ..++.|+|||||||++|||+||+.||..... .....
T Consensus 159 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~ 238 (303)
T 3hmm_A 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238 (303)
T ss_dssp ETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred cCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchH
Confidence 3699999999986432 1467899999999999999999877643221 11223
Q ss_pred HHHHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhcC
Q 007935 519 ESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKLQ 584 (584)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~ 584 (584)
..+........ .+|.+.......+....+.+++.+||+.||++||||.||+++|++|..|
T Consensus 239 ~~~~~~~~~~~------~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 239 EEMRKVVCEQK------LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp HHHHHHHTTSC------CCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHhccc------CCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 33333332221 1122212122234456778899999999999999999999999998654
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-40 Score=326.64 Aligned_cols=204 Identities=19% Similarity=0.241 Sum_probs=163.8
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeecc
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 427 (584)
+.||+|+||+||+|+...++ +.||||+++.... ...+.+.+|+++|++++|||||++++++.+++..|||||||
T Consensus 80 ~~iG~G~fG~V~~a~~~~tg-----~~vAiK~i~~~~~-~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 80 IKIGEGSTGIVCIATVRSSG-----KLVAVKKMDLRKQ-QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp EEEEECSSCEEEEEEETTTC-----CEEEEEEEEGGGC-SSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred EEeecCcCeEEEEEEECCCC-----CEEEEEEEecCch-hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 46999999999999998776 8999999976432 23477999999999999999999999999999999999999
Q ss_pred cCCcHHHHH------------------------hcc--cccccCCCCccccccCeEEecCCCcc-----------cccCC
Q 007935 428 RNGSLYAAL------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSR-----------ISAIS 470 (584)
Q Consensus 428 ~~GsL~~~L------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~~gt 470 (584)
++|+|.+++ |+. -|+|++++|+.+..++.++..|||.+ ..+||
T Consensus 154 ~gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GT 233 (346)
T 4fih_A 154 EGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGT 233 (346)
T ss_dssp TTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSC
T ss_pred CCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCcccccccC
Confidence 999996655 333 47999999999988899999998843 24799
Q ss_pred CcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC---CCccccChhhhhhhhHH
Q 007935 471 NVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR---PLSEVIDPALVKEIHAK 547 (584)
Q Consensus 471 ~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~ 547 (584)
+.|||||++. +..|+.++||||+||++|||+||+.||.+. ...+.+........ +....++++
T Consensus 234 p~YmAPEvl~-~~~y~~~~DiWSlGvilyeml~G~~PF~~~-----~~~~~~~~i~~~~~~~~~~~~~~s~~-------- 299 (346)
T 4fih_A 234 PYWMAPELIS-RLPYGPEVDIWSLGIMVIEMVDGEPPYFNE-----PPLKAMKMIRDNLPPRLKNLHKVSPS-------- 299 (346)
T ss_dssp GGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCTTTTS-----CHHHHHHHHHHSSCCCCSCGGGSCHH--------
T ss_pred cCcCCHHHHC-CCCCCcHHHHHHHHHHHHHHHHCCCCCCCc-----CHHHHHHHHHcCCCCCCCccccCCHH--------
Confidence 9999999854 478999999999999999999999999742 22333333332221 112223333
Q ss_pred HHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 548 RQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 548 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+.+++.+||+.||++|||+.|+++
T Consensus 300 -----~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 300 -----LKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp -----HHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -----HHHHHHHHcCCChhHCcCHHHHhc
Confidence 345777799999999999999975
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-39 Score=326.54 Aligned_cols=219 Identities=21% Similarity=0.313 Sum_probs=174.0
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCC-CceeeeeEEEEeC-CceeEe
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQH-PNIVRLKAFYYAN-DEKLLI 423 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~H-pnIV~l~g~~~~~-~~~~lV 423 (584)
..+.||+|+||+||+|++...+...+.+.||||+++........++|.+|+++|++++| ||||+++|+|.++ +..+||
T Consensus 68 l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV 147 (353)
T 4ase_A 68 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 147 (353)
T ss_dssp EEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEE
T ss_pred EeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEE
Confidence 45789999999999999887766666789999999876555556889999999999965 9999999999775 568999
Q ss_pred eecccCCcHHHHHhc-------------------------------------------ccccccCCCCccccccCeEEec
Q 007935 424 SDFIRNGSLYAALHG-------------------------------------------FGLNRLLPGTSKVTKNETIVTS 460 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~~-------------------------------------------~g~~~~~~~~~~i~~~~~~~~~ 460 (584)
||||++|+|.++|+. .-|+|+++.|+.+..+..++..
T Consensus 148 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~vKi~ 227 (353)
T 4ase_A 148 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKIC 227 (353)
T ss_dssp EECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEEC
T ss_pred EEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceeeCCCCCEEEC
Confidence 999999999988853 1478999999988888889999
Q ss_pred CCCccc-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHh
Q 007935 461 GTGSRI-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAF 526 (584)
Q Consensus 461 ~~~~~~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~ 526 (584)
|||.+. ..||+.|||||++.. ..|+.|+|||||||+||||+| |+.||.+..... .+...+....
T Consensus 228 DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~-~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~-~~~~~i~~g~ 305 (353)
T 4ase_A 228 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRLKEGT 305 (353)
T ss_dssp CCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-HHHHHHHHTC
T ss_pred cchhhhhcccCCCceeeccccccccccCHHHHhc-CCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHH-HHHHHHHcCC
Confidence 988542 257889999999655 689999999999999999998 999998643221 1222222211
Q ss_pred hcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhh
Q 007935 527 RERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581 (584)
Q Consensus 527 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 581 (584)
+.+.++.++++ +.+++.+||+.||++||||.||++.|+++
T Consensus 306 --~~~~p~~~~~~-------------~~~li~~c~~~dP~~RPt~~eil~~L~~l 345 (353)
T 4ase_A 306 --RMRAPDYTTPE-------------MYQTMLDCWHGEPSQRPTFSELVEHLGNL 345 (353)
T ss_dssp --CCCCCTTCCHH-------------HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --CCCCCccCCHH-------------HHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 22233334433 45577889999999999999999999886
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-39 Score=324.12 Aligned_cols=205 Identities=16% Similarity=0.139 Sum_probs=162.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|+...++ +.||||+++... .+.+|+.+|++++|||||++++++.+++..||||||
T Consensus 63 ~~~lG~G~fG~Vy~a~~~~~g-----~~vAiK~i~~~~------~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 63 QPRVGRGSFGEVHRMKDKQTG-----FQCAVKKVRLEV------FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTC-----CEEEEEEEETTT------CCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred CcEeccCCCeEEEEEEECCCC-----CEEEEEEECHHH------hHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence 467999999999999998776 899999997632 235799999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc-------------------------c--cccccCCCCccccccC-eEEecCCCccc------------
Q 007935 427 IRNGSLYAALHG-------------------------F--GLNRLLPGTSKVTKNE-TIVTSGTGSRI------------ 466 (584)
Q Consensus 427 ~~~GsL~~~L~~-------------------------~--g~~~~~~~~~~i~~~~-~~~~~~~~~~~------------ 466 (584)
|++|+|.++|+. . -|+|++++|+.+..++ .++..|||.+.
T Consensus 132 ~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~ 211 (336)
T 4g3f_A 132 LEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLL 211 (336)
T ss_dssp CTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC----------
T ss_pred cCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccccee
Confidence 999999777643 2 4799999999888776 58888887432
Q ss_pred ----ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC---CccccChh
Q 007935 467 ----SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP---LSEVIDPA 539 (584)
Q Consensus 467 ----~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~d~~ 539 (584)
.+||+.|||||++. +..|+.++|||||||++|||+||+.||.+..... .+.. ......+ +++.+++.
T Consensus 212 ~~~~~~GT~~YmAPE~~~-~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~-~~~~----i~~~~~~~~~~~~~~s~~ 285 (336)
T 4g3f_A 212 TGDYIPGTETHMAPEVVM-GKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP-LCLK----IASEPPPIREIPPSCAPL 285 (336)
T ss_dssp --CCCCCCGGGCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC-CHHH----HHHSCCGGGGSCTTSCHH
T ss_pred cCCccccCccccCHHHHC-CCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH-HHHH----HHcCCCCchhcCccCCHH
Confidence 26999999999954 5789999999999999999999999998643322 2222 2222222 22223333
Q ss_pred hhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhh
Q 007935 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581 (584)
Q Consensus 540 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 581 (584)
+.+++.+||+.||++|||+.|+++.|.+.
T Consensus 286 -------------~~~li~~~L~~dP~~R~sa~el~~~l~~~ 314 (336)
T 4g3f_A 286 -------------TAQAIQEGLRKEPVHRASAMELRRKVGKA 314 (336)
T ss_dssp -------------HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -------------HHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence 34577779999999999999999887754
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-39 Score=310.40 Aligned_cols=206 Identities=17% Similarity=0.229 Sum_probs=160.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||+||+|+...++ +.||||++++.. .....+.|.+|+++|++++|||||++++++.+++..|+||
T Consensus 18 ~~~lG~G~fg~V~~~~~~~~~-----~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 18 VKTLGEGSFGKVKLAYHTTTG-----QKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp EEEEEC---CCEEEEECTTTC-----CEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred EEEEecCcCeEEEEEEECCCC-----CEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 467999999999999987765 899999997652 2333467999999999999999999999999999999999
Q ss_pred ecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCccc----------c
Q 007935 425 DFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI----------S 467 (584)
Q Consensus 425 Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~----------~ 467 (584)
||| +|+|.+++. +. -|+|++++|+.+..++.++..|||.+. .
T Consensus 93 Ey~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~~ 171 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS 171 (275)
T ss_dssp ECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC------------
T ss_pred eCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCCCccCCe
Confidence 999 689976653 33 479999999999888889998988542 4
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHH
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAK 547 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 547 (584)
+||+.|||||++.....++.++||||+||++|||+||+.||.+ .....+.+.......++++.+++++.
T Consensus 172 ~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~-----~~~~~~~~~i~~~~~~~p~~~s~~~~------ 240 (275)
T 3hyh_A 172 CGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD-----ESIPVLFKNISNGVYTLPKFLSPGAA------ 240 (275)
T ss_dssp ---CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCC-----SSHHHHHHHHHHTCCCCCTTSCHHHH------
T ss_pred eECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCC-----CCHHHHHHHHHcCCCCCCCCCCHHHH------
Confidence 7999999999965433346899999999999999999999974 33455556665555555565665554
Q ss_pred HHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 548 RQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 548 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+++.+||+.||++|||++|+++
T Consensus 241 -------~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 241 -------GLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp -------HHHHHHSCSSGGGSCCHHHHHH
T ss_pred -------HHHHHHccCChhHCcCHHHHHc
Confidence 4666699999999999999986
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-39 Score=319.66 Aligned_cols=206 Identities=15% Similarity=0.179 Sum_probs=170.2
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEe
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLI 423 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV 423 (584)
..+.||+|+||+||+|+...++ +.||||++.+.. .....+.+.+|+++|++++|||||++++++.+++..|+|
T Consensus 36 i~~~lG~G~fg~V~~a~~~~~~-----~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yiv 110 (311)
T 4aw0_A 36 FGKILGEGSFSTVVLARELATS-----REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG 110 (311)
T ss_dssp EEEEEEEETTEEEEEEEETTTC-----CEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred EEEEEecccCeEEEEEEECCCC-----CEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 3568999999999999998876 899999997541 233347899999999999999999999999999999999
Q ss_pred eecccCCcHHHHHhc-------------------------c--cccccCCCCccccccCeEEecCCCccc----------
Q 007935 424 SDFIRNGSLYAALHG-------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~~-------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
||||++|+|.++|.. . -|+|++++|+.+..++.++..|||.+.
T Consensus 111 mEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~~ 190 (311)
T 4aw0_A 111 LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 190 (311)
T ss_dssp ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCCC
T ss_pred EecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCccc
Confidence 999999999766642 2 479999999999888899998887432
Q ss_pred ---ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhh
Q 007935 467 ---SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKE 543 (584)
Q Consensus 467 ---~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~ 543 (584)
.+||+.|||||++.. ..|+.++||||+||++|||+||+.||.+ .+..............+++.+++++.
T Consensus 191 ~~~~~GTp~YmAPEvl~~-~~y~~~~DiWSlGvilyeml~G~~PF~~-----~~~~~~~~~i~~~~~~~p~~~s~~~~-- 262 (311)
T 4aw0_A 191 ANSFVGTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRA-----GNEGLIFAKIIKLEYDFPEKFFPKAR-- 262 (311)
T ss_dssp BCCCCSCGGGCCHHHHHH-SCBCHHHHHHHHHHHHHHHHHSSCSSCC-----SSHHHHHHHHHHTCCCCCTTCCHHHH--
T ss_pred ccCcccCcccCCHHHHcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCC-----CCHHHHHHHHHcCCCCCCcccCHHHH--
Confidence 369999999999554 7899999999999999999999999974 23455566666666556666665554
Q ss_pred hhHHHHHHHHHHHHhcccCCCCCCCCChHHHH
Q 007935 544 IHAKRQVLATFHIALNCTELDPEFRPRMRTVS 575 (584)
Q Consensus 544 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~ 575 (584)
+++.+||+.||++|||++|+.
T Consensus 263 -----------dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 263 -----------DLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp -----------HHHHHHSCSSGGGSTTSGGGT
T ss_pred -----------HHHHHHccCCHhHCcChHHHc
Confidence 466669999999999999864
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-39 Score=327.43 Aligned_cols=205 Identities=19% Similarity=0.236 Sum_probs=164.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|+...++ +.||||++..... ...+.+.+|+++|++++|||||+++++|.+++..||||||
T Consensus 156 ~~~iG~G~fG~V~~a~~~~tg-----~~vAiK~i~~~~~-~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy 229 (423)
T 4fie_A 156 FIKIGEGSTGIVCIATVRSSG-----KLVAVKKMDLRKQ-QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 229 (423)
T ss_dssp EEEEEECSSCEEEEEEETTTC-----CEEEEEEEESTTC-SSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred eeEeccCcCcEEEEEEECCCC-----CEEEEEEEeccch-hHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence 357999999999999998776 8999999986533 3347899999999999999999999999999999999999
Q ss_pred ccCCcHHHHH------------------------hcc--cccccCCCCccccccCeEEecCCCcc-----------cccC
Q 007935 427 IRNGSLYAAL------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSR-----------ISAI 469 (584)
Q Consensus 427 ~~~GsL~~~L------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~~g 469 (584)
|++|+|.+++ |.. -|+|++++|+.+..++.++..|||.+ ..+|
T Consensus 230 ~~gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~G 309 (423)
T 4fie_A 230 LEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVG 309 (423)
T ss_dssp CTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCCCEE
T ss_pred CCCCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCcccccccc
Confidence 9999996555 433 47999999999998999999998843 2369
Q ss_pred CCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC---CCccccChhhhhhhhH
Q 007935 470 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR---PLSEVIDPALVKEIHA 546 (584)
Q Consensus 470 t~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~---~~~~~~d~~~~~~~~~ 546 (584)
|+.|||||++. +..|+.++|||||||++|||++|+.||.+. ...+.+........ .....++++
T Consensus 310 Tp~YmAPEvl~-~~~y~~~~DiWSlGvilyeml~G~~PF~~~-----~~~~~~~~i~~~~~~~~~~~~~~s~~------- 376 (423)
T 4fie_A 310 TPYWMAPELIS-RLPYGPEVDIWSLGIMVIEMVDGEPPYFNE-----PPLKAMKMIRDNLPPRLKNLHKVSPS------- 376 (423)
T ss_dssp CTTTCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCTTTTS-----CHHHHHHHHHHSCCCCCSCTTSSCHH-------
T ss_pred CcCcCCHHHHC-CCCCCcHHHHHHHHHHHHHHHHCCCCCCCc-----CHHHHHHHHHcCCCCCCcccccCCHH-------
Confidence 99999999954 478999999999999999999999999742 22333333332221 112233433
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 547 KRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 547 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+.+|+.+||+.||++|||+.|+++
T Consensus 377 ------~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 377 ------LKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp ------HHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ------HHHHHHHHcCCChhHCcCHHHHhc
Confidence 345677799999999999999975
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-38 Score=312.50 Aligned_cols=208 Identities=24% Similarity=0.341 Sum_probs=161.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||+||+|+...+.. ..+.||||+++... ......++.+|+++|++++|||||++++++.+++..|+|||
T Consensus 29 ~~~lG~G~fg~Vy~a~~~~~~~--~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmE 106 (304)
T 3ubd_A 29 LKVLGQGSFGKVFLVKKISGSD--ARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILD 106 (304)
T ss_dssp EEEEECGGGCEEEEEEECSSTT--TTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEEEC
T ss_pred EEEEecCCCeEEEEEEEccCCC--CCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEE
Confidence 4689999999999998754321 12799999997652 22233578999999999999999999999999999999999
Q ss_pred cccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCcc-----------cc
Q 007935 426 FIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR-----------IS 467 (584)
Q Consensus 426 y~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~ 467 (584)
||++|+|.++|+ +. -|+|++++|+.+..++.++..|||.+ ..
T Consensus 107 y~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~ 186 (304)
T 3ubd_A 107 FLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 186 (304)
T ss_dssp CCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC-----CCCCSC
T ss_pred cCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceeccCCCcccccc
Confidence 999999976664 32 47999999999888888888888743 24
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHH
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAK 547 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 547 (584)
+||+.|||||++. +..|+.++||||+||++|||+||+.||.+ .+..+..........++++.+++++.
T Consensus 187 ~GT~~YmAPE~~~-~~~y~~~~DiwSlGvilyemltG~~PF~~-----~~~~~~~~~i~~~~~~~p~~~s~~~~------ 254 (304)
T 3ubd_A 187 CGTVEYMAPEVVN-RRGHTQSADWWSFGVLMFEMLTGTLPFQG-----KDRKETMTMILKAKLGMPQFLSPEAQ------ 254 (304)
T ss_dssp CCCGGGCCHHHHH-TSCCCTHHHHHHHHHHHHHHHHSSCSSCC-----SSHHHHHHHHHHCCCCCCTTSCHHHH------
T ss_pred ccCcccCCHHHhc-cCCCCCCCcccchHHHHHHHHhCCCCCCC-----cCHHHHHHHHHcCCCCCCCcCCHHHH------
Confidence 7999999999954 47899999999999999999999999974 23455556666666556666666554
Q ss_pred HHHHHHHHHHhcccCCCCCCCCCh-----HHHH
Q 007935 548 RQVLATFHIALNCTELDPEFRPRM-----RTVS 575 (584)
Q Consensus 548 ~~~~~~~~l~~~Cl~~~P~~RPt~-----~ev~ 575 (584)
+++.+||+.||++|||+ +|++
T Consensus 255 -------~li~~~L~~dP~~R~ta~~~~~~eil 280 (304)
T 3ubd_A 255 -------SLLRMLFKRNPANRLGAGPDGVEEIK 280 (304)
T ss_dssp -------HHHHHHTCSSGGGSTTCSTTTHHHHH
T ss_pred -------HHHHHHcccCHHHCCCCCcCCHHHHH
Confidence 46666999999999985 5665
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=301.21 Aligned_cols=205 Identities=18% Similarity=0.312 Sum_probs=154.1
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCc-------
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDE------- 419 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~------- 419 (584)
.+.||+|+||+||+|+...++ +.||||+++........+.|.+|+++|++++|||||++++++.+.+.
T Consensus 10 ~~~lG~G~fg~V~~a~~~~~~-----~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 10 IQCLGRGGFGVVFEAKNKVDD-----CNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp EEEEEECC--EEEEEEETTTC-----CEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred eeEEecCCCeEEEEEEECCCC-----CEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 468999999999999988765 89999999865555555789999999999999999999999986543
Q ss_pred -----eeEeeecccCCcHHHHHhc----------------------------c--cccccCCCCccccccCeEEecCCCc
Q 007935 420 -----KLLISDFIRNGSLYAALHG----------------------------F--GLNRLLPGTSKVTKNETIVTSGTGS 464 (584)
Q Consensus 420 -----~~lV~Ey~~~GsL~~~L~~----------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~ 464 (584)
.|+|||||++|+|.++++. . -|+|++++|+.+..++.++..|||.
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGl 164 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGL 164 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccCcc
Confidence 6899999999999766642 2 4789999999998888899988885
Q ss_pred cc-----------------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHH
Q 007935 465 RI-----------------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESL 521 (584)
Q Consensus 465 ~~-----------------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~ 521 (584)
+. .+||+.|||||++. +..|+.++|||||||++|||++ ||.. .......
T Consensus 165 a~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~-~~~y~~~~DiwSlGvilyell~---Pf~~----~~~~~~~ 236 (299)
T 4g31_A 165 VTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIH-GNSYSHKVDIFSLGLILFELLY---PFST----QMERVRT 236 (299)
T ss_dssp C--------------------------CCCTTSCHHHHT-TCCCCTHHHHHHHHHHHHHHHS---CCSS----HHHHHHH
T ss_pred ceecCCCccccccccccccccccCCcccCccccCHHHHc-CCCCCCHHHHHHHHHHHHHHcc---CCCC----ccHHHHH
Confidence 32 25999999999954 5789999999999999999997 7753 1111122
Q ss_pred HHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 522 VRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 522 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+....... .+ +.. . .......+++.+||+.||++|||+.|+++
T Consensus 237 ~~~~~~~~--~p----~~~-~-----~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 237 LTDVRNLK--FP----PLF-T-----QKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHHHHTTC--CC----HHH-H-----HHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHhcCC--CC----CCC-c-----ccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 22222111 11 111 1 11123456888999999999999999986
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=297.22 Aligned_cols=219 Identities=16% Similarity=0.186 Sum_probs=159.4
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC------Cc
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN------DE 419 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~------~~ 419 (584)
.+.||+|+||+||+|+...++ +.||||+++... .....+.+.+|+++|++++|||||++++++... +.
T Consensus 59 ~~~lG~G~fG~V~~a~~~~t~-----~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 59 IETIGNGAYGVVSSARRRLTG-----QQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp EEEEEECSSCEEEEEEETTTC-----CEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred EEEEecccCeEEEEEEECCCC-----CEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 467999999999999998776 899999997652 333457799999999999999999999998643 57
Q ss_pred eeEeeecccCCcHHHHH-------------------------hcc--cccccCCCCccccccCeEEecCCCcc-------
Q 007935 420 KLLISDFIRNGSLYAAL-------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSR------- 465 (584)
Q Consensus 420 ~~lV~Ey~~~GsL~~~L-------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~------- 465 (584)
.|||||||+ |+|.+++ |+. -|+|++++|+.+..++.++..|||..
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~ 212 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSP 212 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC----
T ss_pred EEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeecccCc
Confidence 899999996 6786555 333 47999999998888888888888743
Q ss_pred --------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCC-cccc
Q 007935 466 --------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPL-SEVI 536 (584)
Q Consensus 466 --------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~ 536 (584)
..+||+.|||||++.....|+.++||||+||++|||+||+.||.+.. ..+.+.......... ....
T Consensus 213 ~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~-----~~~~l~~I~~~~g~p~~~~~ 287 (398)
T 4b99_A 213 AEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKN-----YVHQLQLIMMVLGTPSPAVI 287 (398)
T ss_dssp ---CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSS-----HHHHHHHHHHHHCCCCGGGT
T ss_pred cccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCC-----HHHHHHHHHHhcCCCChHHh
Confidence 23799999999986654567999999999999999999999997532 222222221110000 0000
Q ss_pred C----hhhhhhh-----------hH--HHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 537 D----PALVKEI-----------HA--KRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 537 d----~~~~~~~-----------~~--~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
. ....... .. .....++.+|+.+||+.||++|||+.|+++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 288 QAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp C-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred hhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 0 0000000 00 001135677899999999999999999875
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-34 Score=307.37 Aligned_cols=210 Identities=19% Similarity=0.233 Sum_probs=166.0
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHH---HHHHHHhcCCCceeeeeEEEEeCCce
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFES---EVEAIARVQHPNIVRLKAFYYANDEK 420 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~---Ei~~l~~l~HpnIV~l~g~~~~~~~~ 420 (584)
..++||+|+||.||+|+...++ +.||||++++.. .......+.+ |+++++.++|||||++++++.+.+..
T Consensus 193 i~k~LG~G~fG~V~la~~~~tg-----~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 193 VHRIIGRGGFGEVYGCRKADTG-----KMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp EEEEEEECSSEEEEEEEETTTC-----CEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred EEEEEecccCeEEEEEEECCCC-----CEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 3578999999999999998876 899999997541 1111133334 46677788999999999999999999
Q ss_pred eEeeecccCCcHHHHH-------------------------hcc--cccccCCCCccccccCeEEecCCCcc--------
Q 007935 421 LLISDFIRNGSLYAAL-------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSR-------- 465 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~~L-------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~-------- 465 (584)
|||||||+||+|.++| |.. .|+|++++|+.+..++.++..|||.+
T Consensus 268 ylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~~ 347 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP 347 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCCC
T ss_pred EEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccceeeecCCCCC
Confidence 9999999999997665 333 47899999999999999999998853
Q ss_pred -cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhh
Q 007935 466 -ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEI 544 (584)
Q Consensus 466 -~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~ 544 (584)
..+||+.|||||++..+..|+.++||||+||++|||+||+.||.+... .....+.+........++..+++++.+
T Consensus 348 ~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~--~~~~~i~~~i~~~~~~~p~~~S~~a~d-- 423 (689)
T 3v5w_A 348 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT--KDKHEIDRMTLTMAVELPDSFSPELRS-- 423 (689)
T ss_dssp CSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGC--CCHHHHHHHHHHCCCCCCTTSCHHHHH--
T ss_pred CCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHhhcCCCCCCCccCCHHHHH--
Confidence 347999999999976666799999999999999999999999975332 234445555555555566666666654
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCC-----hHHHH
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPR-----MRTVS 575 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt-----~~ev~ 575 (584)
++.+||+.||.+|++ +.||.
T Consensus 424 -----------LI~~lL~~dP~~Rl~~~~~ga~ei~ 448 (689)
T 3v5w_A 424 -----------LLEGLLQRDVNRRLGCLGRGAQEVK 448 (689)
T ss_dssp -----------HHHHHTCSCGGGCTTCSSSTHHHHT
T ss_pred -----------HHHHHccCCHhHCCCCCCCCHHHHh
Confidence 555699999999998 56665
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-34 Score=288.13 Aligned_cols=160 Identities=18% Similarity=0.266 Sum_probs=131.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||+||+|+.+... ...+.||||++..... ..++.+|+++|+++ +|||||++++++.++++.|+|||
T Consensus 26 ~~~lG~G~fg~Vy~a~~~~~~--~~~~~vAiK~i~~~~~---~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE 100 (361)
T 4f9c_A 26 EDKIGEGTFSSVYLATAQLQV--GPEEKIALKHLIPTSH---PIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMP 100 (361)
T ss_dssp EEEEEECSSEEEEEEEEEBTT--SCEEEEEEEEECTTSC---HHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEE
T ss_pred EEEEecccCcEEEEEEEcccC--CCCCEEEEEEEccccC---HHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEe
Confidence 468999999999999865321 1127899999976432 26788999999998 69999999999999999999999
Q ss_pred cccCCcHHHHH----------------------hcc--cccccCCCCcccccc-CeEEecCCCccc--------------
Q 007935 426 FIRNGSLYAAL----------------------HGF--GLNRLLPGTSKVTKN-ETIVTSGTGSRI-------------- 466 (584)
Q Consensus 426 y~~~GsL~~~L----------------------~~~--g~~~~~~~~~~i~~~-~~~~~~~~~~~~-------------- 466 (584)
||++|+|.+++ |+. -|+|++++|+.+..+ +.++..|||.+.
T Consensus 101 ~~~g~~L~~~~~~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~~ 180 (361)
T 4f9c_A 101 YLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQ 180 (361)
T ss_dssp CCCCCCHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCGGGGGC-
T ss_pred CCCcccHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcccccccccc
Confidence 99999996555 433 479999999888665 677788887432
Q ss_pred -------------------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCC
Q 007935 467 -------------------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGP 511 (584)
Q Consensus 467 -------------------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~ 511 (584)
.+||+.|||||++.....|+.++||||+||++|||+||+.||...
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~ 250 (361)
T 4f9c_A 181 SEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKA 250 (361)
T ss_dssp -------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCC
T ss_pred ccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCC
Confidence 269999999999665456999999999999999999999999753
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-33 Score=302.40 Aligned_cols=209 Identities=16% Similarity=0.222 Sum_probs=164.1
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|+...++ +.||||++..... ...+.+.+|+++|++++|||||++++++.+++..|+||||
T Consensus 162 ~~~lG~G~fg~V~~~~~~~tg-----~~~AiK~i~~~~~-~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 162 HEELGTGAFGVVHRVTERATG-----NNFAAKFVMTPHE-SDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp EEEEEEETTEEEEEEEETTTC-----CEEEEEEEECCSH-HHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred EEEEeeccCeEEEEEEECCCC-----CEEEEEEEeccch-hhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 468999999999999998776 8999999977532 2347789999999999999999999999999999999999
Q ss_pred ccCCcHHHHHh--------------------------cc--cccccCCCCcccccc--CeEEecCCCccc----------
Q 007935 427 IRNGSLYAALH--------------------------GF--GLNRLLPGTSKVTKN--ETIVTSGTGSRI---------- 466 (584)
Q Consensus 427 ~~~GsL~~~L~--------------------------~~--g~~~~~~~~~~i~~~--~~~~~~~~~~~~---------- 466 (584)
|++|+|.++|. +. .|+|++++|+.+..+ +.++..|||.+.
T Consensus 236 ~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~~~ 315 (573)
T 3uto_A 236 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV 315 (573)
T ss_dssp CCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEEEE
T ss_pred cCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCceee
Confidence 99999977663 22 478889988877654 677888887532
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhH
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 546 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 546 (584)
.+||+.|||||++. +..|+.++||||+||++|||++|+.||.+. ...+...........+.....+.+ .
T Consensus 316 ~~GT~~y~APEv~~-~~~y~~~~DiWSlGvilyeml~G~~Pf~~~-----~~~~~~~~i~~~~~~~~~~~~~~~----s- 384 (573)
T 3uto_A 316 TTGTAEFAAPEVAE-GKPVGYYTDMWSVGVLSYILLSGLSPFGGE-----NDDETLRNVKSCDWNMDDSAFSGI----S- 384 (573)
T ss_dssp ECSSGGGCCHHHHT-TCCBCHHHHHHHHHHHHHHHHHSCCSSCCS-----SHHHHHHHHHTTCCCCCSGGGTTS----C-
T ss_pred eEECccccCHHHhC-CCCCCcHHHHHHHHHHHHHHHHCCCCCCCc-----CHHHHHHHHHhCCCCCCcccccCC----C-
Confidence 37999999999954 578999999999999999999999999742 234444444443332222111111 1
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 547 KRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 547 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
..+.+|+.+||+.||++|||+.|+++
T Consensus 385 ----~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 385 ----EDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp ----HHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ----HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 13456788899999999999999986
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=4e-32 Score=272.07 Aligned_cols=215 Identities=25% Similarity=0.381 Sum_probs=167.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|....++ +.||+|++... .....+.|.+|++++++++|||||++++++.+++..++||||
T Consensus 15 ~~~lG~G~~g~V~~~~~~~~~-----~~va~K~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 15 GEVLGKGCFGQAIKVTHRETG-----EVMVMKELIRF-DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp EEEEECCSSEEEEEEEETTTC-----CEEEEEEESCC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceecCCCCEEEEEEEECCCC-----cEEEEEEeccC-CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 568999999999999998765 89999998663 334457899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCcc-------------
Q 007935 427 IRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSR------------- 465 (584)
Q Consensus 427 ~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~------------- 465 (584)
+++|+|.++++. . -|+++++.|+.+..+..++..|+|..
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 168 (310)
T 3s95_A 89 IKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGL 168 (310)
T ss_dssp CTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC---------
T ss_pred cCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceeccccccccccc
Confidence 999999777643 2 36888889988888888888887744
Q ss_pred ------------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCc
Q 007935 466 ------------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLS 533 (584)
Q Consensus 466 ------------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 533 (584)
...||+.|+|||++. +..++.++|||||||++|||++|..||..................... .+
T Consensus 169 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 245 (310)
T 3s95_A 169 RSLKKPDRKKRYTVVGNPYWMAPEMIN-GRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRY--CP 245 (310)
T ss_dssp -----------CCCCSCGGGCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHT--CC
T ss_pred ccccccccccccccCCCcceeCHHHhc-CCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccccc--CC
Confidence 235899999999954 478999999999999999999999998753322211111111111111 12
Q ss_pred cccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 534 EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 534 ~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
..+++. +.+++.+||+.||++|||+.|+++.|++++.
T Consensus 246 ~~~~~~-------------l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~ 282 (310)
T 3s95_A 246 PNCPPS-------------FFPITVRCCDLDPEKRPSFVKLEHWLETLRM 282 (310)
T ss_dssp TTCCTT-------------HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCHH-------------HHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 223333 3457777999999999999999999998864
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=2.9e-32 Score=274.52 Aligned_cols=226 Identities=27% Similarity=0.389 Sum_probs=176.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|+..++ +.||||++.... ....+.|.+|++++++++|||||++++++.+.+..++||||
T Consensus 44 ~~~lg~G~~g~Vy~~~~~~~------~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (321)
T 2qkw_B 44 KFLIGHGVFGKVYKGVLRDG------AKVALKRRTPES-SQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKY 116 (321)
T ss_dssp CCCSCBCSSSEEEEEECTTC------CEEEEEECCSCC-SSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEEC
T ss_pred cceeecCCCeeEEEEEECCC------CEEEEEEecccC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEc
Confidence 45799999999999997655 799999987653 33457899999999999999999999999999999999999
Q ss_pred ccCCcHHHHH-----------------------------hccc--ccccCCCCccccccCeEEecCCCccc---------
Q 007935 427 IRNGSLYAAL-----------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSRI--------- 466 (584)
Q Consensus 427 ~~~GsL~~~L-----------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~--------- 466 (584)
+++|+|.+++ |..| |+++++.|+.+..+..++..++|...
T Consensus 117 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 196 (321)
T 2qkw_B 117 MENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTH 196 (321)
T ss_dssp CTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCC
T ss_pred CCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeecccccccccccccc
Confidence 9999986544 4333 67888888888877888888876432
Q ss_pred ----ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCC-CCcHHHHHHHHhhcCCCCccccChhhh
Q 007935 467 ----SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEND-GKGLESLVRKAFRERRPLSEVIDPALV 541 (584)
Q Consensus 467 ----~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~d~~~~ 541 (584)
..||..|+|||++.. ..++.++|||||||++|||+||+.||...... ......+....... ..+...+++.+.
T Consensus 197 ~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 274 (321)
T 2qkw_B 197 LSTVVKGTLGYIDPEYFIK-GRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNN-GQLEQIVDPNLA 274 (321)
T ss_dssp CBCCCEEETTTCCHHHHHH-CBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTT-TCCCSSSSSSCT
T ss_pred cccccCCCccccCHHHhcC-CCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhcccc-ccHHHhcChhhc
Confidence 247889999998655 57999999999999999999999999764332 23344443333222 223445555443
Q ss_pred hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 542 KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 542 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
... .......+.+++.+||+.||++|||+.|+++.|+.+.
T Consensus 275 ~~~-~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l 314 (321)
T 2qkw_B 275 DKI-RPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYAL 314 (321)
T ss_dssp TCS-CHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccc-CHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 322 2345677889999999999999999999999999764
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=99.98 E-value=5.7e-32 Score=272.53 Aligned_cols=207 Identities=18% Similarity=0.221 Sum_probs=166.1
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|+...++ +.||||++.... .....+.+.+|++++++++|||||++++++.+.+..++|||
T Consensus 20 ~~~lG~G~~g~V~~a~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 94 (328)
T 3fe3_A 20 LKTIGKGNFAKVKLARHILTG-----REVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIME 94 (328)
T ss_dssp EEEEEECSSEEEEEEEETTTC-----CEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred EEEEeeCCCEEEEEEEECCCC-----CEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEE
Confidence 467999999999999987665 899999997652 33345778999999999999999999999999999999999
Q ss_pred cccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCcc----------ccc
Q 007935 426 FIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR----------ISA 468 (584)
Q Consensus 426 y~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~----------~~~ 468 (584)
|+++|+|.+++. +. -|++++++|+.+..+..++..|||.. ...
T Consensus 95 ~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~ 174 (328)
T 3fe3_A 95 YASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFC 174 (328)
T ss_dssp CCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGGGTTS
T ss_pred CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCcccccc
Confidence 999999976663 22 46888888888888888888888743 236
Q ss_pred CCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHH
Q 007935 469 ISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKR 548 (584)
Q Consensus 469 gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 548 (584)
||+.|+|||++......+.++||||+||++|||+||+.||.+ .....+..........++..+++.+
T Consensus 175 gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~-----~~~~~~~~~i~~~~~~~p~~~s~~~-------- 241 (328)
T 3fe3_A 175 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-----QNLKELRERVLRGKYRIPFYMSTDC-------- 241 (328)
T ss_dssp SSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCC-----SSHHHHHHHHHHCCCCCCTTSCHHH--------
T ss_pred CCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCC-----CCHHHHHHHHHhCCCCCCCCCCHHH--------
Confidence 899999999965533345799999999999999999999974 3345555555555555555455544
Q ss_pred HHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 549 QVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 549 ~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+++.+||+.||.+|||+.|+++
T Consensus 242 -----~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 242 -----ENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp -----HHHHHHHCCSSTTTSCCHHHHTT
T ss_pred -----HHHHHHHCCCChhHCcCHHHHhc
Confidence 34666799999999999999975
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.1e-31 Score=268.40 Aligned_cols=212 Identities=26% Similarity=0.335 Sum_probs=162.4
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
..+.||+|+||.||+|+.. + ..||||++.... .....++|.+|++++++++|||||++++++.+.+..++||
T Consensus 41 i~~~lG~G~~g~V~~~~~~-~------~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 113 (309)
T 3p86_A 41 IKEKIGAGSFGTVHRAEWH-G------SDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVT 113 (309)
T ss_dssp EEEEEEECSSEEEEEEEET-T------EEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEE
T ss_pred eeeEeecCCCeEEEEEEEC-C------CcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEE
Confidence 3568999999999999874 3 789999997653 3334578999999999999999999999999999999999
Q ss_pred ecccCCcHHHHHh----------------------------ccc----ccccCCCCccccccCeEEecCCCcc-------
Q 007935 425 DFIRNGSLYAALH----------------------------GFG----LNRLLPGTSKVTKNETIVTSGTGSR------- 465 (584)
Q Consensus 425 Ey~~~GsL~~~L~----------------------------~~g----~~~~~~~~~~i~~~~~~~~~~~~~~------- 465 (584)
||+++|+|.++++ +.| |+++++.|+.+..+..++..++|..
T Consensus 114 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~ 193 (309)
T 3p86_A 114 EYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTF 193 (309)
T ss_dssp ECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC---------
T ss_pred ecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCccccccc
Confidence 9999999976653 334 5677778888877778888888743
Q ss_pred ----cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHh--hcCCCCccccChh
Q 007935 466 ----ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF--RERRPLSEVIDPA 539 (584)
Q Consensus 466 ----~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~d~~ 539 (584)
...||+.|+|||++. +..++.++|||||||++|||+||+.||.... ......... .....++..+++.
T Consensus 194 ~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~elltg~~Pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 267 (309)
T 3p86_A 194 LSSKSAAGTPEWMAPEVLR-DEPSNEKSDVYSFGVILWELATLQQPWGNLN-----PAQVVAAVGFKCKRLEIPRNLNPQ 267 (309)
T ss_dssp --------CCTTSCHHHHT-TCCCCTTHHHHHHHHHHHHHHHCCCTTTTSC-----HHHHHHHHHHSCCCCCCCTTSCHH
T ss_pred cccccCCCCccccChhhhc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhcCCCCCCCccCCHH
Confidence 246899999999955 4678999999999999999999999997432 222222221 1122233344444
Q ss_pred hhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 540 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 268 -------------l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~ 298 (309)
T 3p86_A 268 -------------VAAIIEGCWTNEPWKRPSFATIMDLLRPLIK 298 (309)
T ss_dssp -------------HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred -------------HHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 3457777999999999999999999998753
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-32 Score=275.39 Aligned_cols=236 Identities=28% Similarity=0.401 Sum_probs=177.6
Q ss_pred cchhhHhhhc-----ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeee
Q 007935 337 LELEDLLRAS-----AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLK 411 (584)
Q Consensus 337 ~~~~~l~~~~-----~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~ 411 (584)
++++++.... .+.||+|+||.||+|+..++ +.||||++...........|.+|++++++++|||||+++
T Consensus 20 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~ 93 (326)
T 3uim_A 20 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADG------TLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLR 93 (326)
T ss_dssp CCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSS------CCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCC
T ss_pred ecHHHHHHHhhccccceeEecCCCcEEEEEEecCC------CEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceE
Confidence 4455554443 46899999999999987655 789999998764443345799999999999999999999
Q ss_pred EEEEeCCceeEeeecccCCcHHHHH-----------------------------hcc-----cccccCCCCccccccCeE
Q 007935 412 AFYYANDEKLLISDFIRNGSLYAAL-----------------------------HGF-----GLNRLLPGTSKVTKNETI 457 (584)
Q Consensus 412 g~~~~~~~~~lV~Ey~~~GsL~~~L-----------------------------~~~-----g~~~~~~~~~~i~~~~~~ 457 (584)
+++.+.+..++||||+++|+|.+++ |.. .|+++++.|+.+..+..+
T Consensus 94 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~ 173 (326)
T 3uim_A 94 GFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEA 173 (326)
T ss_dssp EEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCE
T ss_pred EEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCE
Confidence 9999999999999999999996555 333 356777788877777778
Q ss_pred EecCCCccc------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCC---CCCCCcHHHHH
Q 007935 458 VTSGTGSRI------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGP---ENDGKGLESLV 522 (584)
Q Consensus 458 ~~~~~~~~~------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~---~~~~~~l~~~~ 522 (584)
+..++|... ..||+.|+|||++.. ..++.++|||||||++|||+||+.||... .........++
T Consensus 174 kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 252 (326)
T 3uim_A 174 VVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 252 (326)
T ss_dssp EECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHH-SEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHH
T ss_pred EeccCccccccCcccccccccccCCcCccCHHHhcc-CCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHH
Confidence 888877432 248999999998654 57899999999999999999999999621 12233445555
Q ss_pred HHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhh
Q 007935 523 RKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581 (584)
Q Consensus 523 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 581 (584)
....... ......+....... .......+.+++.+||+.||.+|||+.||++.|++.
T Consensus 253 ~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 253 KGLLKEK-KLEALVDVDLQGNY-KDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp TTTTSSC-CSTTSSCTTCTTSC-CHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred HHHhhch-hhhhhcChhhcccc-CHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 4433332 23444444443222 235667889999999999999999999999999864
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.5e-32 Score=272.50 Aligned_cols=223 Identities=20% Similarity=0.240 Sum_probs=164.9
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCc----ee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDE----KL 421 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~----~~ 421 (584)
..+.||+|+||.||+|+..+ +.||||++..... ....+.+|+.++++++|||||++++++.+... .+
T Consensus 28 ~~~~lg~G~~g~Vy~~~~~~-------~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 98 (322)
T 3soc_A 28 LLEVKARGRFGCVWKAQLLN-------EYVAVKIFPIQDK--QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLW 98 (322)
T ss_dssp EEEEEECSTTCEEEEEEETT-------EEEEEEEECGGGH--HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred hhheecccCceEEEEEEECC-------CEEEEEEeecCch--HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEE
Confidence 35689999999999998763 7999999976422 23567779999999999999999999988554 69
Q ss_pred EeeecccCCcHHHHH------------------------hcc------------cccccCCCCccccccCeEEecCCCcc
Q 007935 422 LISDFIRNGSLYAAL------------------------HGF------------GLNRLLPGTSKVTKNETIVTSGTGSR 465 (584)
Q Consensus 422 lV~Ey~~~GsL~~~L------------------------~~~------------g~~~~~~~~~~i~~~~~~~~~~~~~~ 465 (584)
+||||+++|+|.+++ |+. -|+++++.|+.+..+..++..|||..
T Consensus 99 lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a 178 (322)
T 3soc_A 99 LITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA 178 (322)
T ss_dssp EEEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcc
Confidence 999999999997654 432 36778888888877778888887643
Q ss_pred c-------------ccCCCcccCccccccC----CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCC-----------c
Q 007935 466 I-------------SAISNVYLAPEARIYG----SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGK-----------G 517 (584)
Q Consensus 466 ~-------------~~gt~~y~aPE~~~~~----~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~-----------~ 517 (584)
. ..||+.|+|||++... ..++.++|||||||++|||+||+.||.+...... .
T Consensus 179 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 258 (322)
T 3soc_A 179 LKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPS 258 (322)
T ss_dssp EEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCC
T ss_pred cccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCc
Confidence 1 3689999999985532 2456789999999999999999999986443211 1
Q ss_pred HHHHHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 518 LESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 518 l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
...+......... ...... ..........+.+++.+||+.||++|||+.||++.|++|++
T Consensus 259 ~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 318 (322)
T 3soc_A 259 LEDMQEVVVHKKK--RPVLRD----YWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR 318 (322)
T ss_dssp HHHHHHHHTTSCC--CCCCCG----GGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hhhhhhhhhcccC--CCCccc----cccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 2222222222111 111111 11222345568889999999999999999999999999864
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.2e-32 Score=279.36 Aligned_cols=214 Identities=23% Similarity=0.343 Sum_probs=167.3
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
..+.||+|+||.||+|+...++ +.||||.++........++|.+|++++++++|||||+++|+|.+++..++|||
T Consensus 118 ~~~~lG~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 118 LGEQIGRGNFGEVFSGRLRADN-----TLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp EEEEEEEETTEEEEEEEETTTC-----CEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred EeeEeccCCCCeEEEEEEecCC-----eEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 3578999999999999998654 89999999865444445789999999999999999999999999999999999
Q ss_pred cccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCcccc----------
Q 007935 426 FIRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRIS---------- 467 (584)
Q Consensus 426 y~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~~---------- 467 (584)
|+++|+|.++++. . -|+++++.|+.+..++.++..|+|....
T Consensus 193 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~ 272 (377)
T 3cbl_A 193 LVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASG 272 (377)
T ss_dssp CCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCS
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeecC
Confidence 9999999777642 2 3678888888888788888888874321
Q ss_pred ---cCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhc-CCCCccccChhhhh
Q 007935 468 ---AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRE-RRPLSEVIDPALVK 542 (584)
Q Consensus 468 ---~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~d~~~~~ 542 (584)
.++..|+|||++.. ..++.++|||||||++|||+| |+.||.... ........... ..+.+..+++
T Consensus 273 ~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il~el~t~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~---- 342 (377)
T 3cbl_A 273 GLRQVPVKWTAPEALNY-GRYSSESDVWSFGILLWETFSLGASPYPNLS-----NQQTREFVEKGGRLPCPELCPD---- 342 (377)
T ss_dssp SCCEEEGGGSCHHHHHH-CEEEHHHHHHHHHHHHHHHHTTSCCSSTTSC-----HHHHHHHHHTTCCCCCCTTCCH----
T ss_pred CCCCCCcCcCCHhHhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHcCCCCCCCCCCCH----
Confidence 23557999999654 578999999999999999999 999997532 12222222221 1122222222
Q ss_pred hhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 543 EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 543 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
.+.+++.+||+.||++|||+.++++.|++++.
T Consensus 343 ---------~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 343 ---------AVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp ---------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---------HHHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 34567888999999999999999999999864
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-31 Score=268.97 Aligned_cols=216 Identities=25% Similarity=0.354 Sum_probs=167.4
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
..+.||+|+||.||+|.....+.. ...||||+++........+.|.+|++++++++|||||++++++.+.+..++|||
T Consensus 53 i~~~lG~G~~g~V~~~~~~~~~~~--~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 130 (325)
T 3kul_A 53 IEKIIGSGDSGEVCYGRLRVPGQR--DVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTE 130 (325)
T ss_dssp EEEEEEETTTEEEEEEEECCTTSC--CEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEE
T ss_pred EeeEEEeCCCcEEEEEEEecCCCC--CceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEee
Confidence 357899999999999998754321 267999999876555556789999999999999999999999999999999999
Q ss_pred cccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc-----------
Q 007935 426 FIRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI----------- 466 (584)
Q Consensus 426 y~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~----------- 466 (584)
|+++|+|.++++. . .|+++++.|+.+..+..++..|||...
T Consensus 131 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 210 (325)
T 3kul_A 131 YMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYT 210 (325)
T ss_dssp CCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEECC----CCEE
T ss_pred CCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCcccccccCccceee
Confidence 9999999877642 2 367888888888777888888877432
Q ss_pred ---ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhc-CCCCccccChhhh
Q 007935 467 ---SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRE-RRPLSEVIDPALV 541 (584)
Q Consensus 467 ---~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~d~~~~ 541 (584)
..+|..|+|||++.. ..++.++|||||||++|||++ |+.||... ............ ..+.+..+++
T Consensus 211 ~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~ell~~g~~p~~~~-----~~~~~~~~~~~~~~~~~~~~~~~--- 281 (325)
T 3kul_A 211 TTGGKIPIRWTAPEAIAF-RTFSSASDVWSFGVVMWEVLAYGERPYWNM-----TNRDVISSVEEGYRLPAPMGCPH--- 281 (325)
T ss_dssp CC---CCGGGSCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCTTTTS-----CHHHHHHHHHTTCCCCCCTTCCH---
T ss_pred ccCCCCcccccCHhHhcC-CCCCcHHHHHHHHHHHHHHHcCCCCCcccC-----CHHHHHHHHHcCCCCCCCCCcCH---
Confidence 134667999999654 689999999999999999999 99999742 222333333222 1122222333
Q ss_pred hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 542 KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 542 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.+.+++.+||+.||++|||+.||++.|+++.
T Consensus 282 ----------~l~~li~~~l~~dp~~Rps~~eil~~L~~l~ 312 (325)
T 3kul_A 282 ----------ALHQLMLDCWHKDRAQRPRFSQIVSVLDALI 312 (325)
T ss_dssp ----------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----------HHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 3455778899999999999999999999875
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.3e-31 Score=258.22 Aligned_cols=210 Identities=21% Similarity=0.342 Sum_probs=165.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|+..++ ..||||++....... ++|.+|++++++++||||+++++++.+++..++||||
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~------~~vavK~~~~~~~~~--~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (269)
T 4hcu_A 15 VQEIGSGQFGLVHLGYWLNK------DKVAIKTIREGAMSE--EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF 86 (269)
T ss_dssp EEEEEECSSCEEEEEEETTT------EEEEEEEECTTSBCH--HHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred eheecCCCccEEEEEEecCC------CeEEEEEecccccCH--HHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEe
Confidence 46799999999999998766 789999998754332 7899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc------------
Q 007935 427 IRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI------------ 466 (584)
Q Consensus 427 ~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~------------ 466 (584)
+++|+|.++++. . -|+++++.|+.+..+..++..+++...
T Consensus 87 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 166 (269)
T 4hcu_A 87 MEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 166 (269)
T ss_dssp CTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTS
T ss_pred CCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEeccccccccccccccccccC
Confidence 999999777642 2 367778888888777788888887432
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC-CCCccccChhhhhhh
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER-RPLSEVIDPALVKEI 544 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~d~~~~~~~ 544 (584)
..+|..|+|||++.. ..++.++||||+|+++|||+| |+.||... ............. ...+...++
T Consensus 167 ~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~~ll~~g~~p~~~~-----~~~~~~~~~~~~~~~~~~~~~~~------ 234 (269)
T 4hcu_A 167 TKFPVKWASPEVFSF-SRYSSKSDVWSFGVLMWEVFSEGKIPYENR-----SNSEVVEDISTGFRLYKPRLAST------ 234 (269)
T ss_dssp TTCCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-----CHHHHHHHHHTTCCCCCCTTSCH------
T ss_pred cccccccCCHHHhcC-CCCCchhhhHHHHHHHHHHhcCCCCCCCCC-----CHHHHHHHHhcCccCCCCCcCCH------
Confidence 245667999999654 679999999999999999999 99999742 2233333333221 112222333
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
.+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 235 -------~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 235 -------HVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp -------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -------HHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 34557778999999999999999999999875
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.1e-31 Score=271.96 Aligned_cols=218 Identities=22% Similarity=0.299 Sum_probs=167.5
Q ss_pred cceeceeecCceEEEEEecCCC--CCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeE
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGS--GMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLL 422 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~--~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~l 422 (584)
..+.||+|+||.||+|+..... .......||||+++........++|.+|+++++++ +|||||+++++|.+.+..++
T Consensus 85 ~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~l 164 (370)
T 2psq_A 85 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 164 (370)
T ss_dssp EEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEE
T ss_pred eeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEE
Confidence 3568999999999999875321 11233789999998765555567899999999999 89999999999999999999
Q ss_pred eeecccCCcHHHHHhc-----------------------------------------c--cccccCCCCccccccCeEEe
Q 007935 423 ISDFIRNGSLYAALHG-----------------------------------------F--GLNRLLPGTSKVTKNETIVT 459 (584)
Q Consensus 423 V~Ey~~~GsL~~~L~~-----------------------------------------~--g~~~~~~~~~~i~~~~~~~~ 459 (584)
||||+++|+|.++++. . .|+++++.|+.+..++.++.
T Consensus 165 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl 244 (370)
T 2psq_A 165 IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKI 244 (370)
T ss_dssp EEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEE
T ss_pred EEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECCCCCEEE
Confidence 9999999999887642 1 36778888888888888888
Q ss_pred cCCCccc-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHH
Q 007935 460 SGTGSRI-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKA 525 (584)
Q Consensus 460 ~~~~~~~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~ 525 (584)
.|||... ..+|+.|+|||++.. ..++.++|||||||++|||+| |+.||.+... .++....
T Consensus 245 ~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslG~il~ellt~g~~p~~~~~~-----~~~~~~~ 318 (370)
T 2psq_A 245 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV-----EELFKLL 318 (370)
T ss_dssp CCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHT-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG-----GGHHHHH
T ss_pred ccccCCcccCcccceecccCCCcccceECHhHhcC-CCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHHH
Confidence 8887432 245678999998554 689999999999999999999 9999975322 2222222
Q ss_pred hhcC-CCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 526 FRER-RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 526 ~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.... ...+..+++ .+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 319 ~~~~~~~~~~~~~~-------------~l~~li~~~l~~dP~~Rpt~~ell~~L~~il 363 (370)
T 2psq_A 319 KEGHRMDKPANCTN-------------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 363 (370)
T ss_dssp HTTCCCCCCTTSCH-------------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hcCCCCCCCCCCCH-------------HHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 2221 112222222 3456778899999999999999999999874
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.5e-31 Score=263.35 Aligned_cols=206 Identities=18% Similarity=0.255 Sum_probs=159.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|....++ +.||||++..... ...+.+.+|+.++++++|||||++++++.+.+..++||||
T Consensus 25 ~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 25 FEKIGQGASGTVYTAMDVATG-----QEVAIRQMNLQQQ-PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp CEEEEEETTEEEEEEEBTTTC-----CEEEEEEEEGGGC-SCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred eeeeccCCCeEEEEEEECCCC-----cEEEEEEeecccc-cHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 357999999999999987665 8999999976432 2347799999999999999999999999999999999999
Q ss_pred ccCCcHHHHHh------------------------cc--cccccCCCCccccccCeEEecCCCcc-----------cccC
Q 007935 427 IRNGSLYAALH------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR-----------ISAI 469 (584)
Q Consensus 427 ~~~GsL~~~L~------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~~g 469 (584)
+++|+|.++++ .. -|+++++.|+.+..++.++..|||.. ...|
T Consensus 99 ~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 178 (297)
T 3fxz_A 99 LAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVG 178 (297)
T ss_dssp CTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCS
T ss_pred CCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccCCccC
Confidence 99999976653 33 36788888888888888888888742 2368
Q ss_pred CCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC--CCccccChhhhhhhhHH
Q 007935 470 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR--PLSEVIDPALVKEIHAK 547 (584)
Q Consensus 470 t~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~ 547 (584)
|+.|+|||++.. ..++.++|||||||++|||+||+.||.... .............. ..++.+++
T Consensus 179 t~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~~----~~~~~~~~~~~~~~~~~~~~~~~~--------- 244 (297)
T 3fxz_A 179 TPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMIEGEPPYLNEN----PLRALYLIATNGTPELQNPEKLSA--------- 244 (297)
T ss_dssp CGGGCCHHHHHC-SCBCTHHHHHHHHHHHHHHHHSSCTTTTSC----HHHHHHHHHHHCSCCCSCGGGSCH---------
T ss_pred CcCccChhhhcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHHhCCCCCCCCccccCH---------
Confidence 999999999554 689999999999999999999999997422 11221111111111 11222222
Q ss_pred HHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 548 RQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 548 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||+.||++|||+.|+++
T Consensus 245 ----~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 245 ----IFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp ----HHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ----HHHHHHHHHccCChhHCcCHHHHhh
Confidence 3455777899999999999999975
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.8e-31 Score=263.15 Aligned_cols=224 Identities=27% Similarity=0.366 Sum_probs=170.4
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC---cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD---ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~---~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
+.||+|+||.||+|... + +.||||++.... .....+.|.+|++++++++||||+++++++.+.+..++||
T Consensus 37 ~~lg~G~~g~Vy~~~~~-~------~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 109 (307)
T 2nru_A 37 NKMGEGGFGVVYKGYVN-N------TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVY 109 (307)
T ss_dssp CEEEECSSEEEEEEESS-S------CEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred CccccCCCeEEEEEEEC-C------ceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEE
Confidence 67999999999999873 3 689999997542 2233578999999999999999999999999999999999
Q ss_pred ecccCCcHHHHHh----------------------------cc--cccccCCCCccccccCeEEecCCCcc---------
Q 007935 425 DFIRNGSLYAALH----------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR--------- 465 (584)
Q Consensus 425 Ey~~~GsL~~~L~----------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~--------- 465 (584)
||+++|+|.+++. +. .|+++.+.|+.+..+..++..+++..
T Consensus 110 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 189 (307)
T 2nru_A 110 VYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189 (307)
T ss_dssp ECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSC
T ss_pred EecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCcEEEeeccccccccccccc
Confidence 9999999977764 22 35777778887777777777777632
Q ss_pred ----cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhh
Q 007935 466 ----ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALV 541 (584)
Q Consensus 466 ----~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~ 541 (584)
...||+.|+|||.+ . ..++.++||||||+++|||+||+.||...... ..+..+..........+.+.+++.+.
T Consensus 190 ~~~~~~~g~~~y~aPE~~-~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (307)
T 2nru_A 190 VMTSRIVGTTAYMAPEAL-R-GEITPKSDIYSFGVVLLEIITGLPAVDEHREP-QLLLDIKEEIEDEEKTIEDYIDKKMN 266 (307)
T ss_dssp EECSSCCSCGGGCCHHHH-T-TEECTHHHHHHHHHHHHHHHHCCCSBCTTBSS-SBTTHHHHHHHTTSCCHHHHSCSSCS
T ss_pred ccccccCCCcCcCChHHh-c-CCCCccchhHHHHHHHHHHHHCCCCcccCcch-HHHHHHHHHhhhhhhhhhhhcccccc
Confidence 13588999999984 4 35899999999999999999999999864332 22333333333333333333333322
Q ss_pred hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 542 KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 542 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
. ........+.+++.+||+.||.+|||+.||++.|+++++
T Consensus 267 ~--~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 267 D--ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp C--CCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred c--cchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 1 122345678889999999999999999999999999864
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6e-31 Score=257.67 Aligned_cols=211 Identities=21% Similarity=0.346 Sum_probs=164.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|...++ ..||||+++...... +++.+|++++.+++||||+++++++.+++..++||||
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~------~~vavK~~~~~~~~~--~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (268)
T 3sxs_A 13 LKELGSGQFGVVKLGKWKGQ------YDVAVKMIKEGSMSE--DEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEY 84 (268)
T ss_dssp EEEEEEETTEEEEEEEETTT------EEEEEEEECBTTBCH--HHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred eeeeccCCCceEEEEEecCc------eeEEEEEeccCCCcH--HHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEc
Confidence 46799999999999988765 789999998754332 7799999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc------------
Q 007935 427 IRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI------------ 466 (584)
Q Consensus 427 ~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~------------ 466 (584)
+++|+|.++++. . -|+++.+.|+.+..+..++..+++...
T Consensus 85 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 164 (268)
T 3sxs_A 85 ISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVG 164 (268)
T ss_dssp CTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCS
T ss_pred cCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecchhhhhcccC
Confidence 999999776642 2 367788888888777778888876432
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCC-CCccccChhhhhhh
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERR-PLSEVIDPALVKEI 544 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~d~~~~~~~ 544 (584)
..+|..|+|||++.. ..++.++||||||+++|||+| |+.||.... ............. ..+...++
T Consensus 165 ~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~------ 232 (268)
T 3sxs_A 165 TKFPVKWSAPEVFHY-FKYSSKSDVWAFGILMWEVFSLGKMPYDLYT-----NSEVVLKVSQGHRLYRPHLASD------ 232 (268)
T ss_dssp CCCCGGGCCHHHHHH-SEEETTHHHHHHHHHHHHHHTTTCCTTTTSC-----HHHHHHHHHTTCCCCCCTTSCH------
T ss_pred CCcCcccCCHHHHhc-cCCchhhhhHHHHHHHHHHHcCCCCCccccC-----hHHHHHHHHcCCCCCCCCcChH------
Confidence 235567999999544 678999999999999999999 999997422 2223333222221 12222333
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhcC
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKLQ 584 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~ 584 (584)
.+.+++.+||+.||++|||+.|+++.|++++++
T Consensus 233 -------~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 233 -------TIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp -------HHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred -------HHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 345577789999999999999999999999764
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.2e-31 Score=271.63 Aligned_cols=218 Identities=22% Similarity=0.278 Sum_probs=165.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|++.........+.||||+++.........+|.+|+.++++++|||||++++++.+.+..++||||
T Consensus 76 ~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 155 (367)
T 3l9p_A 76 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLEL 155 (367)
T ss_dssp EEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEEEEe
Confidence 46899999999999997653333334799999998655555557899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc--------------------------------c--cccccCCCCccccccC---eEEecCCCccc---
Q 007935 427 IRNGSLYAALHG--------------------------------F--GLNRLLPGTSKVTKNE---TIVTSGTGSRI--- 466 (584)
Q Consensus 427 ~~~GsL~~~L~~--------------------------------~--g~~~~~~~~~~i~~~~---~~~~~~~~~~~--- 466 (584)
+++|+|.++++. . -|++++++|+.+..++ .++..|||...
T Consensus 156 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~ 235 (367)
T 3l9p_A 156 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 235 (367)
T ss_dssp CTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHH
T ss_pred CCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECCCccccccc
Confidence 999999777642 2 3677888888776443 47777776432
Q ss_pred ----------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCC-CCcc
Q 007935 467 ----------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERR-PLSE 534 (584)
Q Consensus 467 ----------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~~ 534 (584)
..||+.|+|||++.. ..++.++|||||||++|||+| |+.||... .............. ..+.
T Consensus 236 ~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslG~il~ellt~g~~pf~~~-----~~~~~~~~i~~~~~~~~~~ 309 (367)
T 3l9p_A 236 RAGYYRKGGCAMLPVKWMPPEAFME-GIFTSKTDTWSFGVLLWEIFSLGYMPYPSK-----SNQEVLEFVTSGGRMDPPK 309 (367)
T ss_dssp HHSSCTTCCGGGSCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTC-----CHHHHHHHHHTTCCCCCCT
T ss_pred cccccccCCCcCCcccEECHHHhcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----CHHHHHHHHHcCCCCCCCc
Confidence 356889999998655 689999999999999999998 99999742 22333333333221 1122
Q ss_pred ccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 535 VIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 535 ~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
.+++ .+.+++.+||+.||++|||+.||++.|+.+..
T Consensus 310 ~~~~-------------~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~ 345 (367)
T 3l9p_A 310 NCPG-------------PVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 345 (367)
T ss_dssp TCCH-------------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCCH-------------HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhh
Confidence 2222 34567888999999999999999999988753
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-31 Score=267.22 Aligned_cols=210 Identities=20% Similarity=0.263 Sum_probs=157.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|+...++ +.||||++.........+.+.+|+.++++++|||||++++++.+++..++||||
T Consensus 12 ~~~lG~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 86 (323)
T 3tki_A 12 VQTLGEGAYGEVQLAVNRVTE-----EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (323)
T ss_dssp EEEEEEETTEEEEEEEETTTC-----CEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred eeEEecCCCEEEEEEEECCCC-----cEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEc
Confidence 467999999999999988665 899999997654433447899999999999999999999999999999999999
Q ss_pred ccCCcHHH-------------------------HHhccc--ccccCCCCccccccCeEEecCCCcc-------------c
Q 007935 427 IRNGSLYA-------------------------ALHGFG--LNRLLPGTSKVTKNETIVTSGTGSR-------------I 466 (584)
Q Consensus 427 ~~~GsL~~-------------------------~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~-------------~ 466 (584)
+++|+|.+ |||+.| |++++++|+.+..++.++..|+|.. .
T Consensus 87 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 166 (323)
T 3tki_A 87 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166 (323)
T ss_dssp CTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCS
T ss_pred CCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcccccCC
Confidence 99999854 445444 6788888888888788888888743 2
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhH
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 546 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 546 (584)
..||+.|+|||++.....++.++|||||||++|||+||+.||............+... .........+++
T Consensus 167 ~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-------- 236 (323)
T 3tki_A 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK--KTYLNPWKKIDS-------- 236 (323)
T ss_dssp CCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTT--CTTSTTGGGSCH--------
T ss_pred CccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcc--cccCCccccCCH--------
Confidence 3689999999996654345789999999999999999999998644332222222111 001011122222
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 547 KRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 547 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||+.||++|||+.|+++
T Consensus 237 -----~~~~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 237 -----APLALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp -----HHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -----HHHHHHHHHccCChhhCcCHHHHhh
Confidence 3456778899999999999999975
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.9e-31 Score=257.98 Aligned_cols=212 Identities=22% Similarity=0.307 Sum_probs=157.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC--CceeEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN--DEKLLI 423 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~--~~~~lV 423 (584)
.+.||+|+||.||+|+.. + ..||||+++... .....+.|.+|+.++++++|||||++++++.+. +..++|
T Consensus 15 ~~~lg~G~~g~V~~~~~~-~------~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 15 LTKLNENHSGELWKGRWQ-G------NDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp EEEEEEETTEEEEEEEET-T------EEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHHhcCCCcceEEEEEEC-C------eeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 468999999999999985 3 789999998653 333457899999999999999999999999887 778999
Q ss_pred eecccCCcHHHHHh---------------------------ccc----ccccCCCCccccccCeEEec--CCCc----cc
Q 007935 424 SDFIRNGSLYAALH---------------------------GFG----LNRLLPGTSKVTKNETIVTS--GTGS----RI 466 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~---------------------------~~g----~~~~~~~~~~i~~~~~~~~~--~~~~----~~ 466 (584)
|||+++|+|.++++ +.| |+++.+.|+.+..++..... +++. ..
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~~~ 167 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPG 167 (271)
T ss_dssp EECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSCTT
T ss_pred ecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeecccC
Confidence 99999999976664 323 55666677766666554443 3332 23
Q ss_pred ccCCCcccCccccccCCCCCC---ccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcC--CCCccccChhhh
Q 007935 467 SAISNVYLAPEARIYGSKFTQ---KCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER--RPLSEVIDPALV 541 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~---ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~d~~~~ 541 (584)
..||+.|+|||++.. ..++. ++|||||||++|||+||+.||.... ............ ...+..+++.
T Consensus 168 ~~~t~~y~aPE~~~~-~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-- 239 (271)
T 3kmu_A 168 RMYAPAWVAPEALQK-KPEDTNRRSADMWSFAVLLWELVTREVPFADLS-----NMEIGMKVALEGLRPTIPPGISPH-- 239 (271)
T ss_dssp CBSCGGGSCHHHHHS-CGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSC-----HHHHHHHHHHSCCCCCCCTTCCHH--
T ss_pred ccCCccccChhhhcc-CCCCCCCchhhHHHHHHHHHHHHhCCCCccccC-----hHHHHHHHHhcCCCCCCCCCCCHH--
Confidence 468999999998554 33333 8999999999999999999997422 222222222221 2223333333
Q ss_pred hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhcC
Q 007935 542 KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKLQ 584 (584)
Q Consensus 542 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~ 584 (584)
+.+++.+||+.||++|||+.|+++.|++++++
T Consensus 240 -----------~~~li~~~l~~~p~~Rps~~~il~~L~~l~~~ 271 (271)
T 3kmu_A 240 -----------VSKLMKICMNEDPAKRPKFDMIVPILEKMQDK 271 (271)
T ss_dssp -----------HHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC-
T ss_pred -----------HHHHHHHHcCCChhhCcCHHHHHHHHHHhhcC
Confidence 44577779999999999999999999999764
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-30 Score=265.20 Aligned_cols=218 Identities=22% Similarity=0.299 Sum_probs=169.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|+..........+.||||.++........+.|.+|++++++++|||||++++++.+.+..++||||
T Consensus 52 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 131 (343)
T 1luf_A 52 VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEY 131 (343)
T ss_dssp EEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEEEec
Confidence 46799999999999998753322333799999998765555557899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc-------------------------------------------------c--cccccCCCCccccccC
Q 007935 427 IRNGSLYAALHG-------------------------------------------------F--GLNRLLPGTSKVTKNE 455 (584)
Q Consensus 427 ~~~GsL~~~L~~-------------------------------------------------~--g~~~~~~~~~~i~~~~ 455 (584)
+++|+|.++++. . -|+++++.|+.+..+.
T Consensus 132 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~ 211 (343)
T 1luf_A 132 MAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENM 211 (343)
T ss_dssp CTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG
T ss_pred CCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEECCCC
Confidence 999999887643 1 3577788888887777
Q ss_pred eEEecCCCccc-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHH
Q 007935 456 TIVTSGTGSRI-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESL 521 (584)
Q Consensus 456 ~~~~~~~~~~~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~ 521 (584)
.++..|+|... ..+|..|+|||++.. ..++.++|||||||++|||+| |+.||.+. .....
T Consensus 212 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~-----~~~~~ 285 (343)
T 1luf_A 212 VVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFY-NRYTTESDVWAYGVVLWEIFSYGLQPYYGM-----AHEEV 285 (343)
T ss_dssp CEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCTTTTS-----CHHHH
T ss_pred eEEEeecCCCcccccCccccccCCCcccceecChhhhcc-CCcCcccccHHHHHHHHHHHhcCCCcCCCC-----ChHHH
Confidence 88888886431 356788999998654 679999999999999999999 99999742 22333
Q ss_pred HHHHhhcCC-CCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 522 VRKAFRERR-PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 522 ~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
......... ..+..+++ .+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 286 ~~~~~~~~~~~~~~~~~~-------------~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~ 335 (343)
T 1luf_A 286 IYYVRDGNILACPENCPL-------------ELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 335 (343)
T ss_dssp HHHHHTTCCCCCCTTCCH-------------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred HHHHhCCCcCCCCCCCCH-------------HHHHHHHHHcccCcccCCCHHHHHHHHHHHHh
Confidence 333322221 12222332 34567788999999999999999999999865
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-30 Score=262.89 Aligned_cols=205 Identities=19% Similarity=0.241 Sum_probs=159.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|+....+ +.||||++..... ...+.+.+|+.++++++|||||++++++...+..++||||
T Consensus 50 ~~~lg~G~~g~V~~a~~~~~g-----~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 123 (321)
T 2c30_A 50 YVKIGEGSTGIVCLAREKHSG-----RQVAVKMMDLRKQ-QRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEF 123 (321)
T ss_dssp EEEEEEETTEEEEEEEETTTC-----CEEEEEEEETTTC-CSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred cEEeccCCCeEEEEEEECCCC-----cEEEEEEEeccch-hHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEec
Confidence 358999999999999987654 8999999976432 3347799999999999999999999999999999999999
Q ss_pred ccCCcHHHHHh------------------------cc--cccccCCCCccccccCeEEecCCCcc-----------cccC
Q 007935 427 IRNGSLYAALH------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR-----------ISAI 469 (584)
Q Consensus 427 ~~~GsL~~~L~------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~~g 469 (584)
+++|+|.+++. .. -|++++++|+.+..++.++..|+|.. ...|
T Consensus 124 ~~~~~L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 203 (321)
T 2c30_A 124 LQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVG 203 (321)
T ss_dssp CCSCBHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCS
T ss_pred CCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCccccccccC
Confidence 99999976653 33 36788888888887788888887632 2368
Q ss_pred CCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC---CccccChhhhhhhhH
Q 007935 470 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP---LSEVIDPALVKEIHA 546 (584)
Q Consensus 470 t~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~d~~~~~~~~~ 546 (584)
|+.|+|||++.. ..++.++|||||||++|||+||+.||... ..............+ ....+++
T Consensus 204 t~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~pf~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-------- 269 (321)
T 2c30_A 204 TPYWMAPEVISR-SLYATEVDIWSLGIMVIEMVDGEPPYFSD-----SPVQAMKRLRDSPPPKLKNSHKVSP-------- 269 (321)
T ss_dssp CGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCTTTTS-----CHHHHHHHHHHSSCCCCTTGGGSCH--------
T ss_pred CccccCHhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHhcCCCCCcCccccCCH--------
Confidence 999999999544 68999999999999999999999999742 122222222222211 0111222
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 547 KRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 547 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||+.||++|||+.|+++
T Consensus 270 -----~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 270 -----VLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp -----HHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -----HHHHHHHHHccCChhhCcCHHHHhc
Confidence 3456777899999999999999986
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=3.9e-31 Score=271.48 Aligned_cols=216 Identities=25% Similarity=0.365 Sum_probs=160.5
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
..+.||+|+||.||+|+....+. ....||||+++........++|.+|++++++++|||||++++++.+.+..++|||
T Consensus 49 ~~~~lG~G~fg~Vy~~~~~~~~~--~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 126 (373)
T 2qol_A 49 IDKVVGAGEFGEVCSGRLKLPSK--KEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 126 (373)
T ss_dssp CCEEEEECSSSEEEEC-CBCTTS--CBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeEEeeCCCeEEEEEEEecCCC--CceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEe
Confidence 35789999999999998863211 1168999999876545556789999999999999999999999999999999999
Q ss_pred cccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc-----------
Q 007935 426 FIRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI----------- 466 (584)
Q Consensus 426 y~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~----------- 466 (584)
|+++|+|.++++. . -|+++++.|+.+..+..++..++|...
T Consensus 127 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 206 (373)
T 2qol_A 127 YMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYT 206 (373)
T ss_dssp CCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC---------------
T ss_pred CCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCccccccccCCcccee
Confidence 9999999877753 2 367788888888777778888876432
Q ss_pred ---ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC-CCCccccChhhh
Q 007935 467 ---SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER-RPLSEVIDPALV 541 (584)
Q Consensus 467 ---~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~d~~~~ 541 (584)
..++..|+|||++.. ..++.++|||||||++|||++ |+.||.... ............ .+....++
T Consensus 207 ~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~-----~~~~~~~i~~~~~~~~~~~~~---- 276 (373)
T 2qol_A 207 TRGGKIPIRWTSPEAIAY-RKFTSASDVWSYGIVLWEVMSYGERPYWEMS-----NQDVIKAVDEGYRLPPPMDCP---- 276 (373)
T ss_dssp -------CTTSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTC-CTTTTCC-----HHHHHHHHHTTEECCCCTTCB----
T ss_pred ccCCCcCCCccChhhhcc-CCcCchhcHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHcCCCCCCCcccc----
Confidence 124567999999654 689999999999999999998 999997432 222222222211 11111111
Q ss_pred hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 542 KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 542 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
..+.+++.+||+.||++||++.||+++|+++.
T Consensus 277 ---------~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~ 308 (373)
T 2qol_A 277 ---------AALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308 (373)
T ss_dssp ---------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---------HHHHHHHHHHhCcChhhCcCHHHHHHHHHHHH
Confidence 24566888899999999999999999999874
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-30 Score=263.27 Aligned_cols=206 Identities=20% Similarity=0.274 Sum_probs=164.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|+...++ +.||||++++.. .....+.+.+|+.++++++|||||++++++.+.+..++||
T Consensus 10 ~~~lG~G~fg~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 10 LKLLGKGTFGKVILVREKATG-----RYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp EEEEEECSSEEEEEEEETTTC-----CEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred EEEEecCCCeEEEEEEECCCC-----CEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 468999999999999988765 899999997641 2233467899999999999999999999999999999999
Q ss_pred ecccCCcHHHHH-------------------------hcc--cccccCCCCccccccCeEEecCCCcc-----------c
Q 007935 425 DFIRNGSLYAAL-------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSR-----------I 466 (584)
Q Consensus 425 Ey~~~GsL~~~L-------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~-----------~ 466 (584)
||+++|+|.+++ |+. .|++++++|+.+..++.++..++|.. .
T Consensus 85 E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~ 164 (337)
T 1o6l_A 85 EYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT 164 (337)
T ss_dssp ECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBCC
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCCCcccc
Confidence 999999996555 333 46888888888888888888887643 2
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhH
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 546 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 546 (584)
..||+.|+|||++. +..++.++|||||||++|||++|+.||... ....+..........++..+++.+.
T Consensus 165 ~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g~~Pf~~~-----~~~~~~~~i~~~~~~~p~~~s~~~~----- 233 (337)
T 1o6l_A 165 FCGTPEYLAPEVLE-DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ-----DHERLFELILMEEIRFPRTLSPEAK----- 233 (337)
T ss_dssp CEECGGGCCGGGGS-SSCBCTTHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHCCCCCCTTSCHHHH-----
T ss_pred cccChhhCChhhhc-CCCCCchhhcccchhHHHHHhcCCCCCCCC-----CHHHHHHHHHcCCCCCCCCCCHHHH-----
Confidence 36899999999954 468999999999999999999999999742 2344444444444444555555543
Q ss_pred HHHHHHHHHHHhcccCCCCCCCC-----ChHHHHH
Q 007935 547 KRQVLATFHIALNCTELDPEFRP-----RMRTVSE 576 (584)
Q Consensus 547 ~~~~~~~~~l~~~Cl~~~P~~RP-----t~~ev~~ 576 (584)
+++.+||+.||++|| ++.|+++
T Consensus 234 --------~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 234 --------SLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp --------HHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred --------HHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 466669999999999 8888864
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.5e-31 Score=259.89 Aligned_cols=216 Identities=22% Similarity=0.279 Sum_probs=164.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC--CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG--DATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|+....+ +.||+|.+... ......+.|.+|+.++++++|||||++++++.+++..++||
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 16 VDKLGGGGMSTVYLAEDTILN-----IKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTC-----SEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred EEEEccCCCEEEEEEEECCCC-----CeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 467999999999999987665 89999998654 22334578999999999999999999999999999999999
Q ss_pred ecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCccc-----------
Q 007935 425 DFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI----------- 466 (584)
Q Consensus 425 Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~----------- 466 (584)
||+++|+|.+++. +. -|+++++.|+.+..++.++..|+|...
T Consensus 91 e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 170 (294)
T 4eqm_A 91 EYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTN 170 (294)
T ss_dssp ECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC---------
T ss_pred eCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCccccccccccccC
Confidence 9999999976654 22 367888888888778888888887432
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC-CccccChhhhhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP-LSEVIDPALVKEI 544 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~d~~~~~~~ 544 (584)
..||+.|+|||++. +..++.++|||||||++|||+||+.||.+. ..............+ ......+.+
T Consensus 171 ~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~~l~~ll~g~~pf~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~---- 240 (294)
T 4eqm_A 171 HVLGTVQYFSPEQAK-GEATDECTDIYSIGIVLYEMLVGEPPFNGE-----TAVSIAIKHIQDSVPNVTTDVRKDI---- 240 (294)
T ss_dssp ----CCSSCCHHHHH-TCCCCTTHHHHHHHHHHHHHHHSSCSSCSS-----CHHHHHHHHHSSCCCCHHHHSCTTS----
T ss_pred ccccCccccCHhHhc-CCCCCchHhHHHHHHHHHHHHhCCCCCCCC-----ChHHHHHHHhhccCCCcchhcccCC----
Confidence 35899999999954 468899999999999999999999999752 222222222222211 111111111
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCC-ChHHHHHHHHhhh
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRP-RMRTVSESLDRVK 582 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RP-t~~ev~~~L~~i~ 582 (584)
...+.+++.+||+.||++|| +++++.+.|+++.
T Consensus 241 -----~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~ 274 (294)
T 4eqm_A 241 -----PQSLSNVILRATEKDKANRYKTIQEMKDDLSSVL 274 (294)
T ss_dssp -----CHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSS
T ss_pred -----CHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHH
Confidence 12455688889999999998 9999999998864
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.3e-31 Score=268.50 Aligned_cols=220 Identities=21% Similarity=0.309 Sum_probs=167.1
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCc-eeEe
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDE-KLLI 423 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~-~~lV 423 (584)
..+.||+|+||.||+|++.+.......+.||||+++........+.|.+|++++.++ +|||||+++++|.+.+. .++|
T Consensus 26 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv 105 (359)
T 3vhe_A 26 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 105 (359)
T ss_dssp EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEE
T ss_pred eceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEE
Confidence 356899999999999996554444445899999998765555557899999999999 89999999999988655 8999
Q ss_pred eecccCCcHHHHHhc-----------------------------------------------------------------
Q 007935 424 SDFIRNGSLYAALHG----------------------------------------------------------------- 438 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~~----------------------------------------------------------------- 438 (584)
|||+++|+|.++++.
T Consensus 106 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (359)
T 3vhe_A 106 VEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDL 185 (359)
T ss_dssp EECCTTEEHHHHHHTTTTSBCSCC------------------------------------------------------CT
T ss_pred EEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcccccch
Confidence 999999999877642
Q ss_pred --------------------------c--cccccCCCCccccccCeEEecCCCccc-------------ccCCCcccCcc
Q 007935 439 --------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI-------------SAISNVYLAPE 477 (584)
Q Consensus 439 --------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~-------------~~gt~~y~aPE 477 (584)
. -|+++++.|+.+..+..++..|+|... ..||..|+|||
T Consensus 186 ~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE 265 (359)
T 3vhe_A 186 YKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 265 (359)
T ss_dssp TTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHH
T ss_pred hccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEChh
Confidence 1 356777778777777778888876432 24677899999
Q ss_pred ccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHH
Q 007935 478 ARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHI 556 (584)
Q Consensus 478 ~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l 556 (584)
++.. ..++.++|||||||++|||+| |+.||.+..... .+...+.. ......+..+++. +.++
T Consensus 266 ~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~-------------l~~l 328 (359)
T 3vhe_A 266 TIFD-RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRLKE--GTRMRAPDYTTPE-------------MYQT 328 (359)
T ss_dssp HHHH-CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-HHHHHHHH--TCCCCCCTTCCHH-------------HHHH
T ss_pred hhcC-CCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH-HHHHHHHc--CCCCCCCCCCCHH-------------HHHH
Confidence 8654 689999999999999999999 999997643321 11111111 1122223333333 4457
Q ss_pred HhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 557 ALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 557 ~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
+.+||+.||++|||+.|+++.|+++.
T Consensus 329 i~~~l~~dP~~Rps~~ell~~L~~~~ 354 (359)
T 3vhe_A 329 MLDCWHGEPSQRPTFSELVEHLGNLL 354 (359)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHccCChhhCCCHHHHHHHHHHHH
Confidence 77799999999999999999999875
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-30 Score=261.74 Aligned_cols=216 Identities=21% Similarity=0.322 Sum_probs=159.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|++...+... ...||+|.++........++|.+|+.++++++|||||+++++|.+. ..++|+||
T Consensus 20 ~~~lG~G~~g~Vy~~~~~~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~v~e~ 97 (327)
T 3poz_A 20 IKVLGSGAFGTVYKGLWIPEGEKV-KIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQL 97 (327)
T ss_dssp EEEEEEETTEEEEEEEECC----C-CEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-SEEEEEEC
T ss_pred ceEEeeCCCeEEEEEEEcCCCceE-EEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-CeEEEEEe
Confidence 468999999999999986654222 2568999987654444558899999999999999999999999875 48899999
Q ss_pred ccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc------------
Q 007935 427 IRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI------------ 466 (584)
Q Consensus 427 ~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~------------ 466 (584)
+++|+|.++++. . -|+++++.|+.+..+..++..+||...
T Consensus 98 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 177 (327)
T 3poz_A 98 MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177 (327)
T ss_dssp CTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC-----
T ss_pred cCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeEccCCccccccc
Confidence 999999777643 2 468888889888888888888887432
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEI 544 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~ 544 (584)
..+|..|+|||++.. ..++.++|||||||++|||+| |+.||..... ..+...+.... ..+.+...++
T Consensus 178 ~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~~~~~~~~~--~~~~~~~~~~------ 246 (327)
T 3poz_A 178 GGKVPIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEKGE--RLPQPPICTI------ 246 (327)
T ss_dssp --CCCGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG--GGHHHHHHTTC--CCCCCTTBCH------
T ss_pred CCCccccccChHHhcc-CCCCchhhhhhhHHHHHHHHhcCCCCccCCCH--HHHHHHHHcCC--CCCCCccCCH------
Confidence 245778999999654 689999999999999999999 9999975332 22222222111 1112222222
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 247 -------~~~~li~~~l~~~p~~Rps~~ell~~l~~~~ 277 (327)
T 3poz_A 247 -------DVYMIMVKCWMIDADSRPKFRELIIEFSKMA 277 (327)
T ss_dssp -------HHHHHHHHHTCSCGGGSCCHHHHHHHHHHHH
T ss_pred -------HHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 3456888899999999999999999998875
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-30 Score=264.89 Aligned_cols=210 Identities=16% Similarity=0.182 Sum_probs=160.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcc-----hhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCcee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-----WRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKL 421 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~-----~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~ 421 (584)
.+.||+|+||.||+|+...++ +.||||.++..... ...+.+.+|+.++++++|||||++++++.+.+..+
T Consensus 17 ~~~LG~G~fg~V~~~~~~~~~-----~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 91 (361)
T 2yab_A 17 GEELGSGQFAIVKKCREKSTG-----LEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVV 91 (361)
T ss_dssp EEEEEEETTEEEEEEEETTTC-----CEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred eeEEeeCcCEEEEEEEECCCC-----CEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEE
Confidence 468999999999999988765 89999999765321 12467999999999999999999999999999999
Q ss_pred EeeecccCCcHHHHHh-------------------------cc--cccccCCCCccccccC----eEEecCCCcc-----
Q 007935 422 LISDFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNE----TIVTSGTGSR----- 465 (584)
Q Consensus 422 lV~Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~----~~~~~~~~~~----- 465 (584)
+||||+++|+|.+++. .. .|++++++|+.+..++ .++..|+|..
T Consensus 92 lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~ 171 (361)
T 2yab_A 92 LILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED 171 (361)
T ss_dssp EEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCT
T ss_pred EEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCC
Confidence 9999999999977663 33 3677888887776554 5777777643
Q ss_pred -----cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhh
Q 007935 466 -----ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPAL 540 (584)
Q Consensus 466 -----~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~ 540 (584)
...||+.|+|||++. +..++.++|||||||++|||++|+.||.+. ...............+. +..
T Consensus 172 ~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslGvil~~ll~g~~Pf~~~-----~~~~~~~~i~~~~~~~~----~~~ 241 (361)
T 2yab_A 172 GVEFKNIFGTPEFVAPEIVN-YEPLGLEADMWSIGVITYILLSGASPFLGD-----TKQETLANITAVSYDFD----EEF 241 (361)
T ss_dssp TCCCCCCCSCGGGCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSCCSSCCS-----SHHHHHHHHHTTCCCCC----HHH
T ss_pred CCccccCCCCccEECchHHc-CCCCCccccHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHhcCCCCC----chh
Confidence 236899999999954 468999999999999999999999999752 22333334333332221 111
Q ss_pred hhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 541 VKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 541 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
...+ ...+.+++.+||..||++|||+.|+++
T Consensus 242 ~~~~-----s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 242 FSQT-----SELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp HTTS-----CHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ccCC-----CHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1111 124556888899999999999999974
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-30 Score=274.44 Aligned_cols=210 Identities=27% Similarity=0.408 Sum_probs=164.9
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
..+.||+|+||.||+|...++ ..||||+++.... ..+.|.+|+++|++++|||||++++++. .+..++|||
T Consensus 192 ~~~~lG~G~fg~V~~~~~~~~------~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e 262 (454)
T 1qcf_A 192 LEKKLGAGQFGEVWMATYNKH------TKVAVKTMKPGSM--SVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITE 262 (454)
T ss_dssp EEEEEECCSSEEEEEEEETTT------EEEEEEEECTTSB--CHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEC
T ss_pred EEEEcccCCceEEEEEEECCc------cEEEEEEecCCCc--cHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEe
Confidence 356899999999999998765 7899999986533 3488999999999999999999999986 677999999
Q ss_pred cccCCcHHHHHhc-----------------------------ccccccCCCCccccccCeEEecCCCccc----------
Q 007935 426 FIRNGSLYAALHG-----------------------------FGLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 426 y~~~GsL~~~L~~-----------------------------~g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
||++|+|.++|+. ..|+++++.|+.+..+..++..|||...
T Consensus 263 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~ 342 (454)
T 1qcf_A 263 FMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAR 342 (454)
T ss_dssp CCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTT
T ss_pred ecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceecc
Confidence 9999999877752 2468888888888888888888887543
Q ss_pred --ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC-CCCccccChhhhh
Q 007935 467 --SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER-RPLSEVIDPALVK 542 (584)
Q Consensus 467 --~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~d~~~~~ 542 (584)
..+|..|+|||++.. ..++.++|||||||++|||+| |+.||.+.. ..+......... .+.+..+++
T Consensus 343 ~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~t~g~~P~~~~~-----~~~~~~~i~~~~~~~~~~~~~~---- 412 (454)
T 1qcf_A 343 EGAKFPIKWTAPEAINF-GSFTIKSDVWSFGILLMEIVTYGRIPYPGMS-----NPEVIRALERGYRMPRPENCPE---- 412 (454)
T ss_dssp CSSSSCGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-----HHHHHHHHHHTCCCCCCTTSCH----
T ss_pred CCCcccccccCHHHhcc-CCCCcHHHHHhHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHcCCCCCCCCCCCH----
Confidence 135668999999655 579999999999999999999 999997532 222222222221 111222222
Q ss_pred hhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 543 EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 543 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
.+.+++.+||+.||++||||.+|++.|+++..
T Consensus 413 ---------~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~ 444 (454)
T 1qcf_A 413 ---------ELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT 444 (454)
T ss_dssp ---------HHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred ---------HHHHHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence 45568888999999999999999999998753
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=9.1e-31 Score=256.79 Aligned_cols=209 Identities=23% Similarity=0.377 Sum_probs=154.4
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc---chhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA---TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLI 423 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~---~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV 423 (584)
.+.||+|+||.||+|... + ..||||+++.... ....+.+.+|++++++++||||+++++++.+++..++|
T Consensus 12 ~~~lg~G~~g~V~~~~~~-~------~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 12 EEIIGIGGFGKVYRAFWI-G------DEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp EEEEEEETTEEEEEEEET-T------EEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred eeeeccCCCeEEEEEEEc-C------CeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 468999999999999975 3 7899999876422 22347799999999999999999999999999999999
Q ss_pred eecccCCcHHHH------------------------Hhccc-----ccccCCCCccccc--------cCeEEecCCCccc
Q 007935 424 SDFIRNGSLYAA------------------------LHGFG-----LNRLLPGTSKVTK--------NETIVTSGTGSRI 466 (584)
Q Consensus 424 ~Ey~~~GsL~~~------------------------L~~~g-----~~~~~~~~~~i~~--------~~~~~~~~~~~~~ 466 (584)
|||+++|+|.++ ||+.| |++++++|+.+.. +..++..++|...
T Consensus 85 ~e~~~~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~ 164 (271)
T 3dtc_A 85 MEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR 164 (271)
T ss_dssp EECCTTEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC--
T ss_pred EEcCCCCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCccc
Confidence 999999999544 45556 8888888887764 4556777776432
Q ss_pred ---------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcC--CCCccc
Q 007935 467 ---------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER--RPLSEV 535 (584)
Q Consensus 467 ---------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~--~~~~~~ 535 (584)
..||+.|+|||++.. ..++.++||||||+++|||+||+.||.... ............ .+.+..
T Consensus 165 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~ 238 (271)
T 3dtc_A 165 EWHRTTKMSAAGAYAWMAPEVIRA-SMFSKGSDVWSYGVLLWELLTGEVPFRGID-----GLAVAYGVAMNKLALPIPST 238 (271)
T ss_dssp -----------CCGGGSCHHHHHH-CCCSHHHHHHHHHHHHHHHHHCCCTTTTSC-----HHHHHHHHHTSCCCCCCCTT
T ss_pred ccccccccCCCCccceeCHHHhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHhhhcCCCCCCCCcc
Confidence 368999999998554 678999999999999999999999997522 122222222221 112222
Q ss_pred cChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhh
Q 007935 536 IDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581 (584)
Q Consensus 536 ~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 581 (584)
+++ .+.+++.+||+.||++|||+.|+++.|++|
T Consensus 239 ~~~-------------~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 239 CPE-------------PFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp CCH-------------HHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred cCH-------------HHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 232 345677889999999999999999999875
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-30 Score=259.59 Aligned_cols=218 Identities=21% Similarity=0.281 Sum_probs=161.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHh--cCCCceeeeeEEEEeC----Cce
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIAR--VQHPNIVRLKAFYYAN----DEK 420 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~--l~HpnIV~l~g~~~~~----~~~ 420 (584)
.+.||+|+||.||+|+.. + +.||||++.... .+.+.+|.+++.. ++|||||++++++.+. +..
T Consensus 13 ~~~lg~G~~g~V~~~~~~-~------~~vavK~~~~~~----~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ 81 (301)
T 3q4u_A 13 LECVGKGRYGEVWRGSWQ-G------ENVAVKIFSSRD----EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL 81 (301)
T ss_dssp EEEEEECSSEEEEEEEET-T------EEEEEEEECGGG----HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred EEeeccCCCcEEEEEEEC-C------EEEEEEEecccc----chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCcee
Confidence 467999999999999873 3 799999997532 2567778887777 7999999999997663 458
Q ss_pred eEeeecccCCcHHHH------------------------Hh--------cc--cccccCCCCccccccCeEEecCCCccc
Q 007935 421 LLISDFIRNGSLYAA------------------------LH--------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI 466 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~~------------------------L~--------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~ 466 (584)
++||||+++|+|.++ || .. -|++++++|+.+..+..++..|||...
T Consensus 82 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~ 161 (301)
T 3q4u_A 82 WLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAV 161 (301)
T ss_dssp EEEECCCTTCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred EEehhhccCCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCee
Confidence 999999999999654 45 33 367788888888777888888887431
Q ss_pred ---------------ccCCCcccCccccccCC-----CCCCccchhhHHHHHHHHHhC----------CCCCCCCCCCCC
Q 007935 467 ---------------SAISNVYLAPEARIYGS-----KFTQKCDVYSFGIVLLEILTG----------RLPDAGPENDGK 516 (584)
Q Consensus 467 ---------------~~gt~~y~aPE~~~~~~-----~~~~ksDV~SfGvvl~ElltG----------~~p~~~~~~~~~ 516 (584)
..||+.|+|||++.... .++.++|||||||++|||+|| +.||........
T Consensus 162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~ 241 (301)
T 3q4u_A 162 MHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDP 241 (301)
T ss_dssp EEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred ecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCc
Confidence 26899999999865422 345799999999999999999 888876554444
Q ss_pred cHHHHHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhh
Q 007935 517 GLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581 (584)
Q Consensus 517 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 581 (584)
....+.......... ....+.. ........+.+++.+||+.||++|||+.||++.|++|
T Consensus 242 ~~~~~~~~~~~~~~~--~~~~~~~----~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 242 SFEDMRKVVCVDQQR--PNIPNRW----FSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp CHHHHHHHHTTSCCC--CCCCGGG----GGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred chhhhhHHHhccCCC--CCCChhh----ccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 444443333222211 1111111 1223445778899999999999999999999999987
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-30 Score=272.96 Aligned_cols=210 Identities=25% Similarity=0.385 Sum_probs=164.7
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCC-ceeEee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAND-EKLLIS 424 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~-~~~lV~ 424 (584)
..+.||+|+||.||+|...+ +.||||+++... ..+.|.+|+++|++++|||||++++++.+.+ ..++||
T Consensus 197 ~~~~lG~G~fg~V~~~~~~~-------~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~ 266 (450)
T 1k9a_A 197 LLQTIGKGEFGDVMLGDYRG-------NKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 266 (450)
T ss_dssp EEEEEEECSSEEEEEEEETT-------EEEEEEEESSCT---TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEE
T ss_pred EEeeecCcCCeeEEEEEecC-------CeEEEEEeCCch---HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEE
Confidence 35789999999999998853 789999998643 3378999999999999999999999998765 789999
Q ss_pred ecccCCcHHHHHhc-----------------------------ccccccCCCCccccccCeEEecCCCccc--------c
Q 007935 425 DFIRNGSLYAALHG-----------------------------FGLNRLLPGTSKVTKNETIVTSGTGSRI--------S 467 (584)
Q Consensus 425 Ey~~~GsL~~~L~~-----------------------------~g~~~~~~~~~~i~~~~~~~~~~~~~~~--------~ 467 (584)
|||++|+|.++++. ..|+++++.|+.+..++.++..|||... .
T Consensus 267 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 346 (450)
T 1k9a_A 267 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 346 (450)
T ss_dssp ECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC------
T ss_pred EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCC
Confidence 99999999877753 1367888888888888888888887532 3
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhH
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 546 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 546 (584)
.++..|+|||++.. ..++.++|||||||++|||+| |+.||...... .....+.... ..+.+..+++
T Consensus 347 ~~~~~y~aPE~~~~-~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~--~~~~~i~~~~--~~~~p~~~~~-------- 413 (450)
T 1k9a_A 347 KLPVKWTAPEALRE-KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPRVEKGY--KMDAPDGCPP-------- 413 (450)
T ss_dssp CCCTTTSCHHHHHS-SCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT--THHHHHHTTC--CCCCCTTCCH--------
T ss_pred CCCcceeCHHHhcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCC--CCCCCCcCCH--------
Confidence 56788999999554 689999999999999999999 99999864332 2222222111 1122233333
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 547 KRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 547 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
.+.+++.+||+.||++|||+.|+++.|++++.
T Consensus 414 -----~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~ 445 (450)
T 1k9a_A 414 -----AVYDVMKNCWHLDAATRPTFLQLREQLEHIRT 445 (450)
T ss_dssp -----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 34567788999999999999999999999864
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.1e-30 Score=269.02 Aligned_cols=206 Identities=18% Similarity=0.246 Sum_probs=158.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|.....+ +.||+|.+.... .....+.+.+|++++++++|||||++++++.+++..++|||
T Consensus 16 ~~~LG~G~fg~V~~~~~~~~~-----~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E 90 (444)
T 3soa_A 16 FEELGKGAFSVVRRCVKVLAG-----QEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFD 90 (444)
T ss_dssp EEEEEEC--CEEEEEEETTTT-----EEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEEC
T ss_pred EEEeccCCCeEEEEEEECCCC-----cEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEE
Confidence 468999999999999987766 899999997653 23334679999999999999999999999999999999999
Q ss_pred cccCCcHHHHH-------------------------hcc--cccccCCCCccccc---cCeEEecCCCcc----------
Q 007935 426 FIRNGSLYAAL-------------------------HGF--GLNRLLPGTSKVTK---NETIVTSGTGSR---------- 465 (584)
Q Consensus 426 y~~~GsL~~~L-------------------------~~~--g~~~~~~~~~~i~~---~~~~~~~~~~~~---------- 465 (584)
|+++|+|.+++ |+. -|++++++|+.+.. +..++..|+|..
T Consensus 91 ~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~~~ 170 (444)
T 3soa_A 91 LVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAW 170 (444)
T ss_dssp CCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCCBC
T ss_pred eCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCcee
Confidence 99999996555 333 46888899988763 356777777643
Q ss_pred -cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCc----cccChhh
Q 007935 466 -ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLS----EVIDPAL 540 (584)
Q Consensus 466 -~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~----~~~d~~~ 540 (584)
...||+.|+|||++. +..++.++||||+||++|||++|+.||.+. ...............++ ..+++
T Consensus 171 ~~~~gt~~Y~APE~l~-~~~~~~~~DIwSlGvilyell~G~~Pf~~~-----~~~~~~~~i~~~~~~~~~~~~~~~s~-- 242 (444)
T 3soa_A 171 FGFAGTPGYLSPEVLR-KDPYGKPVDLWACGVILYILLVGYPPFWDE-----DQHRLYQQIKAGAYDFPSPEWDTVTP-- 242 (444)
T ss_dssp CCSCSCGGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCSCCCS-----SHHHHHHHHHHTCCCCCTTTTTTSCH--
T ss_pred ecccCCcccCCHHHhc-CCCCCCccccHHHHHHHHHHHhCCCCCCCc-----cHHHHHHHHHhCCCCCCccccccCCH--
Confidence 236899999999954 468999999999999999999999999742 22333333333322221 12233
Q ss_pred hhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 541 VKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 541 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||+.||++|||+.|+++
T Consensus 243 -----------~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 243 -----------EAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp -----------HHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred -----------HHHHHHHHHcCCChhHCCCHHHHhc
Confidence 3445777799999999999999986
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.4e-30 Score=255.54 Aligned_cols=210 Identities=19% Similarity=0.292 Sum_probs=162.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||++....+ ..||||+++...... ++|.+|++++.+++||||+++++++.+.+..++||||
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~------~~vavK~~~~~~~~~--~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 100 (283)
T 3gen_A 29 LKELGTGQFGVVKYGKWRGQ------YDVAIKMIKEGSMSE--DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY 100 (283)
T ss_dssp EEECC---CEEEEEEEETTT------EEEEEEEECTTSBCH--HHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECC
T ss_pred HhhcCCCCCceEEEEEEcCC------CeEEEEEecCCCCCH--HHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEec
Confidence 46899999999999998865 789999998754333 7899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc------------
Q 007935 427 IRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI------------ 466 (584)
Q Consensus 427 ~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~------------ 466 (584)
+++|+|.++++. . -|+++++.|+.+..+..++..+++...
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 180 (283)
T 3gen_A 101 MANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 180 (283)
T ss_dssp CTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTS
T ss_pred cCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEccccccccccccccccccC
Confidence 999999777643 2 367788888888777888888887542
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC-CCCccccChhhhhhh
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER-RPLSEVIDPALVKEI 544 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~d~~~~~~~ 544 (584)
..+|..|+|||++.. ..++.++||||||+++|||+| |+.||.... ............ ...+...++
T Consensus 181 ~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~------ 248 (283)
T 3gen_A 181 SKFPVRWSPPEVLMY-SKFSSKSDIWAFGVLMWEIYSLGKMPYERFT-----NSETAEHIAQGLRLYRPHLASE------ 248 (283)
T ss_dssp TTSCGGGCCHHHHHH-CCCSHHHHHHHHHHHHHHHHTTTCCTTTTSC-----HHHHHHHHHTTCCCCCCTTCCH------
T ss_pred CccCcccCCHHHhcc-CCCCchhhHHHHHHHHHHHHhCCCCCccccC-----hhHHHHHHhcccCCCCCCcCCH------
Confidence 245678999999654 578999999999999999999 999997422 222333332221 112223333
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
.+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 249 -------~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~ 280 (283)
T 3gen_A 249 -------KVYTIMYSCWHEKADERPTFKILLSNILDVMD 280 (283)
T ss_dssp -------HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -------HHHHHHHHHccCChhHCcCHHHHHHHHHHHhh
Confidence 34557778999999999999999999998754
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-30 Score=261.41 Aligned_cols=208 Identities=16% Similarity=0.213 Sum_probs=161.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|....++ +.||+|.+..... ..+.+.+|++++++++|||||++++++.+.+..++||||
T Consensus 10 ~~~lG~G~~g~Vy~~~~~~~~-----~~~a~K~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 10 AEDLGRGEFGIVHRCVETSSK-----KTYMAKFVKVKGT--DQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp EEEEEECSSEEEEEEEETTTT-----EEEEEEEECCCTH--HHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred eeEEecCCCeEEEEEEECCCC-----cEEEEEEEecCcc--cHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 467999999999999988766 8999999976432 336789999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc--------------------------c--cccccCCCCccccc--cCeEEecCCCccc----------
Q 007935 427 IRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTK--NETIVTSGTGSRI---------- 466 (584)
Q Consensus 427 ~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~--~~~~~~~~~~~~~---------- 466 (584)
+++|+|.+++.. . .|++++++|+.+.. +..++..|+|...
T Consensus 83 ~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~ 162 (321)
T 1tki_A 83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRL 162 (321)
T ss_dssp CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEE
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCcccc
Confidence 999999776642 2 36778888887765 5677777777432
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhH
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 546 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 546 (584)
..||+.|+|||++.. ..++.++|||||||++|||++|+.||.+. ................. +.....+
T Consensus 163 ~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~-----~~~~~~~~i~~~~~~~~----~~~~~~~-- 230 (321)
T 1tki_A 163 LFTAPEYYAPEVHQH-DVVSTATDMWSLGTLVYVLLSGINPFLAE-----TNQQIIENIMNAEYTFD----EEAFKEI-- 230 (321)
T ss_dssp EESCGGGSCHHHHTT-CEECHHHHHHHHHHHHHHHHHSSCTTCCS-----SHHHHHHHHHHTCCCCC----HHHHTTS--
T ss_pred ccCChhhcCcHHhcC-CCCCchhhHHHHHHHHHHHHhCCCCCcCC-----CHHHHHHHHHcCCCCCC----hhhhccC--
Confidence 358999999999544 67899999999999999999999999742 22334444443332221 1111111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 547 KRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 547 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
..++.+++.+||+.||++|||+.|+++
T Consensus 231 ---s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 231 ---SIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp ---CHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ---CHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 124567888999999999999999986
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.6e-30 Score=258.11 Aligned_cols=229 Identities=17% Similarity=0.176 Sum_probs=165.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCC--ceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAND--EKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~--~~~lV~ 424 (584)
.++||+|+||.||+|+....+ +.||||+++........+.+.+|++++++++|||||++++++...+ ..++||
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 14 SDILGQGATANVFRGRHKKTG-----DLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEECSSEEEEEEEETTTC-----CEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred EEEecCCCCeEEEEEEECCCC-----cEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 467999999999999998765 8999999986544444578899999999999999999999998765 679999
Q ss_pred ecccCCcHHHHHhc----------------------------c--cccccCCCCccc----cccCeEEecCCCcc-----
Q 007935 425 DFIRNGSLYAALHG----------------------------F--GLNRLLPGTSKV----TKNETIVTSGTGSR----- 465 (584)
Q Consensus 425 Ey~~~GsL~~~L~~----------------------------~--g~~~~~~~~~~i----~~~~~~~~~~~~~~----- 465 (584)
||+++|+|.+++.. . -|+++++.|+.+ ..+..++..|||..
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~ 168 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168 (319)
T ss_dssp ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCT
T ss_pred eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCC
Confidence 99999999777643 2 367788888766 33345667777643
Q ss_pred -----cccCCCcccCcccccc-------CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC-C
Q 007935 466 -----ISAISNVYLAPEARIY-------GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP-L 532 (584)
Q Consensus 466 -----~~~gt~~y~aPE~~~~-------~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~-~ 532 (584)
...||..|+|||++.. +..++.++|||||||++|||+||+.||....... .....+.......+. .
T Consensus 169 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~p~~~ 247 (319)
T 4euu_A 169 DEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR-RNKEVMYKIITGKPSGA 247 (319)
T ss_dssp TCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGG-GCHHHHHHHHHHCCTTC
T ss_pred CCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccc-hhHHHHHHHhcCCCccc
Confidence 2358999999998542 3678999999999999999999999997543322 223333333332211 0
Q ss_pred ccc----------cChhhhh-hhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhh
Q 007935 533 SEV----------IDPALVK-EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581 (584)
Q Consensus 533 ~~~----------~d~~~~~-~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 581 (584)
... .++.+.. ..........+.+++.+||+.||++|||++|+++...+.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~ 307 (319)
T 4euu_A 248 ISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (319)
T ss_dssp CEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred chhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence 000 0000000 001123344667899999999999999999999887654
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-30 Score=264.31 Aligned_cols=207 Identities=18% Similarity=0.264 Sum_probs=159.4
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
..+.||+|+||.||+|....++ +.||||++.... .....+.+.+|++++++++|||||++++++.+++..++||
T Consensus 33 ~~~~lG~G~~g~V~~~~~~~~~-----~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 33 VKEELGKGAFSVVRRCVHKTTG-----LEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp EEEEEEEETTEEEEEEEETTTC-----CEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred EeeEEecCCCeEEEEEEECCCC-----CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 3568999999999999987765 899999997653 3334577999999999999999999999999999999999
Q ss_pred ecccCCcHHHHH-------------------------hcc--cccccCCCCcccccc---CeEEecCCCcc---------
Q 007935 425 DFIRNGSLYAAL-------------------------HGF--GLNRLLPGTSKVTKN---ETIVTSGTGSR--------- 465 (584)
Q Consensus 425 Ey~~~GsL~~~L-------------------------~~~--g~~~~~~~~~~i~~~---~~~~~~~~~~~--------- 465 (584)
||+++|+|.+++ |.. .|++++++|+.+..+ ..++..|||..
T Consensus 108 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~~ 187 (362)
T 2bdw_A 108 DLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW 187 (362)
T ss_dssp CCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCSC
T ss_pred ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCccc
Confidence 999999996655 333 467788888777654 34677777643
Q ss_pred -cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCc----cccChhh
Q 007935 466 -ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLS----EVIDPAL 540 (584)
Q Consensus 466 -~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~----~~~d~~~ 540 (584)
...||+.|+|||++. +..++.++|||||||++|||++|+.||.+. ....+...........+ ..+++
T Consensus 188 ~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~~ll~g~~Pf~~~-----~~~~~~~~i~~~~~~~~~~~~~~~~~-- 259 (362)
T 2bdw_A 188 HGFAGTPGYLSPEVLK-KDPYSKPVDIWACGVILYILLVGYPPFWDE-----DQHRLYAQIKAGAYDYPSPEWDTVTP-- 259 (362)
T ss_dssp CCSCSCTTTCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHTCCCCCTTGGGGSCH--
T ss_pred ccCCCCccccCHHHHc-cCCCCchhhHHHHHHHHHHHHHCCCCCCCC-----CHHHHHHHHHhCCCCCCcccccCCCH--
Confidence 236899999999954 468999999999999999999999999742 22333333333322211 12222
Q ss_pred hhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 541 VKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 541 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||+.||++|||+.|+++
T Consensus 260 -----------~~~~li~~~L~~dP~~R~t~~e~l~ 284 (362)
T 2bdw_A 260 -----------EAKSLIDSMLTVNPKKRITADQALK 284 (362)
T ss_dssp -----------HHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred -----------HHHHHHHHHcCCChhhCcCHHHHhc
Confidence 3456778899999999999999875
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-30 Score=277.63 Aligned_cols=212 Identities=25% Similarity=0.388 Sum_probs=166.2
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
..+.||+|+||.||+|.+...+ ..||||.++.... ..++|.+|+++|++++|||||+++++|.+.+..++|||
T Consensus 224 ~~~~lG~G~fg~Vy~~~~~~~~-----~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 296 (495)
T 1opk_A 224 MKHKLGGGQYGEVYEGVWKKYS-----LTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 296 (495)
T ss_dssp EEEESGGGTTSSEEEEEEGGGT-----EEEEEEECCSSSS--CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeEecCCCCeEEEEEEEcCCC-----eEEEEEEecCccc--chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEE
Confidence 4578999999999999998754 8999999986533 34789999999999999999999999999999999999
Q ss_pred cccCCcHHHHHhc---------------------------c--cccccCCCCccccccCeEEecCCCccc----------
Q 007935 426 FIRNGSLYAALHG---------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 426 y~~~GsL~~~L~~---------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
||++|+|.++|+. . .|+++++.|+.+..+..++..|||...
T Consensus 297 ~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 376 (495)
T 1opk_A 297 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 376 (495)
T ss_dssp CCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECC
T ss_pred ccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccceeccCCceeec
Confidence 9999999877753 1 367888888888777888888887432
Q ss_pred --ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhh
Q 007935 467 --SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKE 543 (584)
Q Consensus 467 --~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~ 543 (584)
..++..|+|||++.. ..++.++|||||||++|||+| |+.||.+.... .+...+.... ....+..+++
T Consensus 377 ~~~~~~~~y~aPE~~~~-~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~--~~~~~~~~~~--~~~~~~~~~~----- 446 (495)
T 1opk_A 377 AGAKFPIKWTAPESLAY-NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEKDY--RMERPEGCPE----- 446 (495)
T ss_dssp TTCCCCGGGCCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHHHHTTC--CCCCCTTCCH-----
T ss_pred CCCcCCcceeCHhHHhc-CCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCC--CCCCCCCCCH-----
Confidence 134568999999655 679999999999999999999 99999753321 2222222111 1111222222
Q ss_pred hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 544 IHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 544 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.+.+++.+||+.||++||||.||++.|+.+.
T Consensus 447 --------~l~~li~~cl~~dP~~RPs~~el~~~L~~~~ 477 (495)
T 1opk_A 447 --------KVYELMRACWQWNPSDRPSFAEIHQAFETMF 477 (495)
T ss_dssp --------HHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred --------HHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 3456788899999999999999999999874
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-30 Score=255.61 Aligned_cols=216 Identities=20% Similarity=0.324 Sum_probs=160.7
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
..+.||+|+||.||+|.....+. ....||+|+++........+.|.+|+.++++++|||||++++++ .++..++|||
T Consensus 19 ~~~~lg~G~~g~Vy~~~~~~~~~--~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 95 (281)
T 1mp8_A 19 LGRCIGEGQFGDVHQGIYMSPEN--PALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIME 95 (281)
T ss_dssp EEEEEEECSSSEEEEEEECCC----CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred EEeEeeecCCeeEEEEEEecCCC--CceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCccEEEEe
Confidence 35689999999999999865421 12689999998765555567899999999999999999999997 5567899999
Q ss_pred cccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc-----------
Q 007935 426 FIRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI----------- 466 (584)
Q Consensus 426 y~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~----------- 466 (584)
|+++|+|.++++. . -|+++++.|+.+..++.++..|+|...
T Consensus 96 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 175 (281)
T 1mp8_A 96 LCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS 175 (281)
T ss_dssp CCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC----------------
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccccccccCcccccccc
Confidence 9999999777642 2 367788888888878888888877432
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhc-CCCCccccChhhhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRE-RRPLSEVIDPALVKE 543 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~d~~~~~~ 543 (584)
..+|+.|+|||++.. ..++.++|||||||++|||++ |+.||.+.... ... ...... ..+.+..+++
T Consensus 176 ~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~--~~~---~~i~~~~~~~~~~~~~~----- 244 (281)
T 1mp8_A 176 KGKLPIKWMAPESINF-RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVI---GRIENGERLPMPPNCPP----- 244 (281)
T ss_dssp ---CCGGGCCHHHHHH-CCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHH---HHHHTTCCCCCCTTCCH-----
T ss_pred cCCCcccccChhhccc-CCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH--HHH---HHHHcCCCCCCCCCCCH-----
Confidence 245678999999654 678999999999999999997 99999753321 122 222221 1222333333
Q ss_pred hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 544 IHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 544 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
.+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 245 --------~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 276 (281)
T 1mp8_A 245 --------TLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 276 (281)
T ss_dssp --------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --------HHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 34457777999999999999999999998743
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.5e-30 Score=265.09 Aligned_cols=207 Identities=14% Similarity=0.223 Sum_probs=160.7
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeE
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLL 422 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~l 422 (584)
..++||+|+||.||+|+...++ +.||||++++.. .....+.+.+|..++.++ +|||||++++++.+.+..++
T Consensus 56 ~~~~LG~G~fG~V~~~~~~~~~-----~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 56 LLRVIGRGSYAKVLLVRLKKTD-----RIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp EEEEEEECSSEEEEEEEETTTT-----EEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred EEEEEeeCCCeEEEEEEECCCC-----CEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 3568999999999999998776 899999998652 223346688999999987 89999999999999999999
Q ss_pred eeecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCcc----------
Q 007935 423 ISDFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR---------- 465 (584)
Q Consensus 423 V~Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~---------- 465 (584)
||||+++|+|..+++ .. .|++++++|+.+..++.++..|+|..
T Consensus 131 V~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~ 210 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT 210 (396)
T ss_dssp EEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCB
T ss_pred EEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeecccCCCcc
Confidence 999999999965553 33 46888899998888888888888743
Q ss_pred -cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCC----CCcHHHHHHHHhhcCCCCccccChhh
Q 007935 466 -ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEND----GKGLESLVRKAFRERRPLSEVIDPAL 540 (584)
Q Consensus 466 -~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~d~~~ 540 (584)
..+||+.|+|||++. +..++.++|||||||++|||++|+.||...... ......+..........++..+++.+
T Consensus 211 ~~~~gt~~Y~aPE~l~-~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~s~~~ 289 (396)
T 4dc2_A 211 STFCGTPNYIAPEILR-GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKA 289 (396)
T ss_dssp CCCCBCGGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCCTTSCHHH
T ss_pred ccccCCcccCCchhhc-CCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCCCcCCHHH
Confidence 236899999999955 478999999999999999999999999743221 11223334444444444555555554
Q ss_pred hhhhhHHHHHHHHHHHHhcccCCCCCCCCCh
Q 007935 541 VKEIHAKRQVLATFHIALNCTELDPEFRPRM 571 (584)
Q Consensus 541 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~ 571 (584)
. +++.+||+.||++||++
T Consensus 290 ~-------------~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 290 A-------------SVLKSFLNKDPKERLGC 307 (396)
T ss_dssp H-------------HHHHHHTCSCTTTSTTC
T ss_pred H-------------HHHHHHhcCCHhHcCCC
Confidence 3 46666999999999996
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-30 Score=258.00 Aligned_cols=208 Identities=27% Similarity=0.428 Sum_probs=155.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|+..+ +.||||++.... ..+.|.+|++++++++|||||++++++. +..++||||
T Consensus 13 ~~~lg~G~~g~V~~~~~~~-------~~vavK~~~~~~---~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~ 80 (307)
T 2eva_A 13 EEVVGRGAFGVVCKAKWRA-------KDVAIKQIESES---ERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEY 80 (307)
T ss_dssp EEEEECCSSSEEEEEEETT-------EEEEEEECSSTT---HHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEEC
T ss_pred eeEeecCCCceEEEEEECC-------eeEEEEEecChh---HHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEc
Confidence 4679999999999998753 789999997532 3478999999999999999999999876 458999999
Q ss_pred ccCCcHHHHHh----------------------------c-----ccccccCCCCccccccCe-EEecCCCcc-------
Q 007935 427 IRNGSLYAALH----------------------------G-----FGLNRLLPGTSKVTKNET-IVTSGTGSR------- 465 (584)
Q Consensus 427 ~~~GsL~~~L~----------------------------~-----~g~~~~~~~~~~i~~~~~-~~~~~~~~~------- 465 (584)
+++|+|.++++ . ..|+++++.|+.+..++. ++..++|..
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~ 160 (307)
T 2eva_A 81 AEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHM 160 (307)
T ss_dssp CTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC--------
T ss_pred CCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccccc
Confidence 99999976653 3 235666777777666654 567777643
Q ss_pred -cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhh-cCCCCccccChhhhhh
Q 007935 466 -ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR-ERRPLSEVIDPALVKE 543 (584)
Q Consensus 466 -~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~d~~~~~~ 543 (584)
...||..|+|||++. +..++.++|||||||++|||+||+.||...... .......... ...+....+++
T Consensus 161 ~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~----- 231 (307)
T 2eva_A 161 TNNKGSAAWMAPEVFE-GSNYSEKCDVFSWGIILWEVITRRKPFDEIGGP---AFRIMWAVHNGTRPPLIKNLPK----- 231 (307)
T ss_dssp ----CCTTSSCHHHHT-CCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSS---HHHHHHHHHTTCCCCCBTTCCH-----
T ss_pred ccCCCCCceEChhhhC-CCCCCcHHHHHHHHHHHHHHHHCCCCchhhCcc---HHHHHHHHhcCCCCCcccccCH-----
Confidence 236899999999954 468999999999999999999999999753322 1222222222 12222222333
Q ss_pred hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 544 IHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 544 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
.+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 232 --------~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 263 (307)
T 2eva_A 232 --------PIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 263 (307)
T ss_dssp --------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGG
T ss_pred --------HHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 34557788999999999999999999998753
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-30 Score=259.71 Aligned_cols=220 Identities=25% Similarity=0.380 Sum_probs=168.5
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
..+.||+|+||.||+|......+......||||+++........+.+.+|++++++++|||||++++++.+.+..++|||
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 106 (314)
T 2ivs_A 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVE 106 (314)
T ss_dssp EEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEEEe
Confidence 35689999999999998754333333489999999876555556889999999999999999999999999999999999
Q ss_pred cccCCcHHHHHhc-------------------------------------------------c--cccccCCCCcccccc
Q 007935 426 FIRNGSLYAALHG-------------------------------------------------F--GLNRLLPGTSKVTKN 454 (584)
Q Consensus 426 y~~~GsL~~~L~~-------------------------------------------------~--g~~~~~~~~~~i~~~ 454 (584)
|+++|+|.++++. . -|+++++.|+.+..+
T Consensus 107 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli~~~ 186 (314)
T 2ivs_A 107 YAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEG 186 (314)
T ss_dssp CCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETT
T ss_pred ecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchheEEEcCC
Confidence 9999999887742 1 357777888888777
Q ss_pred CeEEecCCCccc-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHH
Q 007935 455 ETIVTSGTGSRI-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLES 520 (584)
Q Consensus 455 ~~~~~~~~~~~~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~ 520 (584)
..++..++|... ..+|..|+|||++.. ..++.++|||||||++|||+| |+.||.+.... .+..
T Consensus 187 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~--~~~~ 263 (314)
T 2ivs_A 187 RKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFD-HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE--RLFN 263 (314)
T ss_dssp TEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHH
T ss_pred CCEEEccccccccccccccceeccCCCCcccccChhhhcC-CCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHH
Confidence 788888876432 245678999998654 678999999999999999999 99999753321 2222
Q ss_pred HHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 521 LVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 521 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
.+... .....+..+++ .+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 264 ~~~~~--~~~~~~~~~~~-------------~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 264 LLKTG--HRMERPDNCSE-------------EMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp HHHTT--CCCCCCTTCCH-------------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HhhcC--CcCCCCccCCH-------------HHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 22111 11112222333 34557778999999999999999999998754
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=3.6e-30 Score=258.19 Aligned_cols=206 Identities=19% Similarity=0.242 Sum_probs=164.4
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|+...++ +.||+|+++... .....+.+.+|+.+++.++|||||++++++.+.+..++||
T Consensus 11 ~~~lG~G~~g~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 11 LRTLGTGSFGRVHLIRSRHNG-----RYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp EEEEEECSSCEEEEEEETTTC-----CEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred EEEEeeCCCEEEEEEEECCCC-----CEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 468999999999999988765 899999997642 2223467889999999999999999999999999999999
Q ss_pred ecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCcc--------cccC
Q 007935 425 DFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR--------ISAI 469 (584)
Q Consensus 425 Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~--------~~~g 469 (584)
||+++|+|.++++ .. -|++++++|+.+..++.++..++|.. ...|
T Consensus 86 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~~~~g 165 (318)
T 1fot_A 86 DYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCG 165 (318)
T ss_dssp CCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCCCS
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecCCccccccC
Confidence 9999999976664 33 36788888888888888888888743 2478
Q ss_pred CCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHHH
Q 007935 470 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQ 549 (584)
Q Consensus 470 t~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 549 (584)
|+.|+|||++. +..++.++|||||||++|||++|+.||.+. ...............++..+++.+.
T Consensus 166 t~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g~~pf~~~-----~~~~~~~~i~~~~~~~p~~~~~~~~-------- 231 (318)
T 1fot_A 166 TPDYIAPEVVS-TKPYNKSIDWWSFGILIYEMLAGYTPFYDS-----NTMKTYEKILNAELRFPPFFNEDVK-------- 231 (318)
T ss_dssp CTTTCCHHHHT-TCCBCTTHHHHHHHHHHHHHHHSSCTTCCS-----SHHHHHHHHHHCCCCCCTTSCHHHH--------
T ss_pred CccccCHhHhc-CCCCCcccchhhhHHHHHHHHhCCCCCCCC-----CHHHHHHHHHhCCCCCCCCCCHHHH--------
Confidence 99999999954 468999999999999999999999999742 2334444555544444555555443
Q ss_pred HHHHHHHHhcccCCCCCCCC-----ChHHHHH
Q 007935 550 VLATFHIALNCTELDPEFRP-----RMRTVSE 576 (584)
Q Consensus 550 ~~~~~~l~~~Cl~~~P~~RP-----t~~ev~~ 576 (584)
+++.+|++.||++|| ++.|+++
T Consensus 232 -----~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 232 -----DLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp -----HHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred -----HHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 466669999999999 8888864
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-30 Score=255.86 Aligned_cols=212 Identities=25% Similarity=0.349 Sum_probs=157.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcch------hhHhHHHHHHHHHhcCCCceeeeeEEEEeCCce
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATW------RFKDFESEVEAIARVQHPNIVRLKAFYYANDEK 420 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~------~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~ 420 (584)
.+.||+|+||.||+|+...++ +.||||++....... ..+.|.+|++++++++||||+++++++.+..
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 24 EKQIGKGGFGLVHKGRLVKDK-----SVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp EEECCCCSSSCEEEEEETTTC-----CEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred hhccccCCceeEEEEEEcCCc-----eEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 467999999999999987665 899999997642221 1267999999999999999999999985543
Q ss_pred eEeeecccCCcHHHHH--------------------------hccc----ccccCCCCccccccCe-----EEecCCCcc
Q 007935 421 LLISDFIRNGSLYAAL--------------------------HGFG----LNRLLPGTSKVTKNET-----IVTSGTGSR 465 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~~L--------------------------~~~g----~~~~~~~~~~i~~~~~-----~~~~~~~~~ 465 (584)
++||||+++|+|.+++ |..| |+++++.|+.+..+.. ++..++|..
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~ 176 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS 176 (287)
T ss_dssp EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTC
T ss_pred eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCcc
Confidence 7999999999996554 4434 5677777777765544 677777643
Q ss_pred --------cccCCCcccCccccc-cCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhc--CCCCcc
Q 007935 466 --------ISAISNVYLAPEARI-YGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE--RRPLSE 534 (584)
Q Consensus 466 --------~~~gt~~y~aPE~~~-~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~--~~~~~~ 534 (584)
...||+.|+|||++. .+..++.++|||||||++|||++|+.||....... .......... ....+.
T Consensus 177 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~ 253 (287)
T 4f0f_A 177 QQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK---IKFINMIREEGLRPTIPE 253 (287)
T ss_dssp BCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCH---HHHHHHHHHSCCCCCCCT
T ss_pred ccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccH---HHHHHHHhccCCCCCCCc
Confidence 246899999999853 23467899999999999999999999997543322 1112222211 112223
Q ss_pred ccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhh
Q 007935 535 VIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581 (584)
Q Consensus 535 ~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 581 (584)
.+++ .+.+++.+||+.||++|||+.|+++.|+++
T Consensus 254 ~~~~-------------~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 254 DCPP-------------RLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp TSCH-------------HHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred ccCH-------------HHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 3333 345577779999999999999999999875
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-30 Score=256.80 Aligned_cols=217 Identities=19% Similarity=0.269 Sum_probs=162.5
Q ss_pred ceeceeecCceEEEEEecCCCCC--CCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGM--GAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~--~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|.....+.. .....||+|.+.... ....+.|.+|++++++++|||||++++++.+++..++||
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 91 (289)
T 4fvq_A 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH-RNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQ 91 (289)
T ss_dssp EEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG-GGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEEEE
T ss_pred eeeeccCCCceEEEEEEecccccccccchhhhhhhccccc-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEEEE
Confidence 46799999999999998765321 112579999997643 334478999999999999999999999999999999999
Q ss_pred ecccCCcHHHHHhc--------------------------c--cccccCCCCccccccCe--------EEecCCCccc--
Q 007935 425 DFIRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNET--------IVTSGTGSRI-- 466 (584)
Q Consensus 425 Ey~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~--------~~~~~~~~~~-- 466 (584)
||+++|+|.++++. . -|++++++|+.+..+.. ++..+++...
T Consensus 92 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~ 171 (289)
T 4fvq_A 92 EFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITV 171 (289)
T ss_dssp ECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTT
T ss_pred ECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeeeccCcccccc
Confidence 99999999777643 2 36778888887766654 7777777543
Q ss_pred -----ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhh
Q 007935 467 -----SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALV 541 (584)
Q Consensus 467 -----~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~ 541 (584)
..||..|+|||++.....++.++|||||||++|||+||..|+... ....... ........++...++.+
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~l- 245 (289)
T 4fvq_A 172 LPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSA----LDSQRKL-QFYEDRHQLPAPKAAEL- 245 (289)
T ss_dssp SCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTT----SCHHHHH-HHHHTTCCCCCCSSCTT-
T ss_pred cCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccc----cchHHHH-HHhhccCCCCCCCCHHH-
Confidence 257889999998654367899999999999999999965554321 1112111 22222333334444444
Q ss_pred hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 542 KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 542 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.+++.+||+.||++|||+.|+++.|+++.
T Consensus 246 ------------~~li~~~l~~dp~~Rps~~~ll~~l~~l~ 274 (289)
T 4fvq_A 246 ------------ANLINNCMDYEPDHRPSFRAIIRDLNSLF 274 (289)
T ss_dssp ------------HHHHHHHSCSSGGGSCCHHHHHHHHHTCC
T ss_pred ------------HHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence 34667799999999999999999999874
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.8e-30 Score=259.37 Aligned_cols=211 Identities=17% Similarity=0.224 Sum_probs=159.6
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcc-----hhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCce
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-----WRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK 420 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~-----~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~ 420 (584)
..+.||+|+||.||+|....++ +.||||.++..... ...+.+.+|++++++++|||||++++++.+.+..
T Consensus 15 ~~~~lG~G~~g~V~~~~~~~~~-----~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 15 TGEELGSGQFAVVKKCREKSTG-----LQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp EEEEEECCSSEEEEEEEETTTC-----CEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred eceEEeeCCCeEEEEEEECCCC-----cEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 3568999999999999988765 89999999764221 1247799999999999999999999999999999
Q ss_pred eEeeecccCCcHHHHHh-------------------------cc--cccccCCCCccccccC----eEEecCCCcc----
Q 007935 421 LLISDFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNE----TIVTSGTGSR---- 465 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~----~~~~~~~~~~---- 465 (584)
++||||+++|+|.+++. .. -|+++++.|+.+..++ .++..++|..
T Consensus 90 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~ 169 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169 (326)
T ss_dssp EEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECC
T ss_pred EEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECC
Confidence 99999999999977664 22 3677888887776655 5777777643
Q ss_pred ------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChh
Q 007935 466 ------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPA 539 (584)
Q Consensus 466 ------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~ 539 (584)
...||+.|+|||++. +..++.++|||||||++|||++|+.||.+. .................. .
T Consensus 170 ~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~~ll~g~~pf~~~-----~~~~~~~~~~~~~~~~~~----~ 239 (326)
T 2y0a_A 170 FGNEFKNIFGTPEFVAPEIVN-YEPLGLEADMWSIGVITYILLSGASPFLGD-----TKQETLANVSAVNYEFED----E 239 (326)
T ss_dssp TTSCCCCCCSCTTTCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSCCSSCCS-----SHHHHHHHHHHTCCCCCH----H
T ss_pred CCCccccccCCcCcCCceeec-CCCCCcHHHHHHHHHHHHHHHHCcCCCCCC-----CHHHHHHHHHhcCCCcCc----c
Confidence 236899999999854 468999999999999999999999999742 222333332222222111 1
Q ss_pred hhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 540 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.... ....+.+++.+||+.||++|||+.|+++
T Consensus 240 ~~~~-----~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 240 YFSN-----TSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp HHTT-----SCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred cccc-----CCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1111 1124556888899999999999999986
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=4e-30 Score=263.74 Aligned_cols=209 Identities=16% Similarity=0.237 Sum_probs=163.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|....++ +.||+|.+.... .....+.+.+|++++++++|||||++++++.+.+..++||
T Consensus 20 ~~~LG~G~fG~V~~~~~~~~~-----~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 20 LRAIGKGSFGKVCIVQKNDTK-----KMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp EEEEECCTTCCEEEEEETTTC-----CEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred EEEEeeCCCeEEEEEEECCCC-----CEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 468999999999999988776 899999997542 2233478899999999999999999999999999999999
Q ss_pred ecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCcc----------cc
Q 007935 425 DFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR----------IS 467 (584)
Q Consensus 425 Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~----------~~ 467 (584)
||+++|+|.++++ .. .|+++++.|+.+..++.++..++|.. ..
T Consensus 95 e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~ 174 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTM 174 (384)
T ss_dssp CCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTCCBCCC
T ss_pred ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeeeccCCCceecc
Confidence 9999999976654 33 36788888988888888888888743 24
Q ss_pred cCCCcccCcccccc--CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhh
Q 007935 468 AISNVYLAPEARIY--GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIH 545 (584)
Q Consensus 468 ~gt~~y~aPE~~~~--~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~ 545 (584)
.||+.|+|||++.. +..++.++|||||||++|||+||+.||..... .................+..+++.+
T Consensus 175 ~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~--~~~~~~~~~~~~~~~~~p~~~s~~~----- 247 (384)
T 4fr4_A 175 AGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSS--TSSKEIVHTFETTVVTYPSAWSQEM----- 247 (384)
T ss_dssp CSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTT--SCHHHHHHHHHHCCCCCCTTSCHHH-----
T ss_pred CCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCC--ccHHHHHHHHhhcccCCCCcCCHHH-----
Confidence 68999999998653 34589999999999999999999999975332 2344444444444444444454444
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCC-hHHHH
Q 007935 546 AKRQVLATFHIALNCTELDPEFRPR-MRTVS 575 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RPt-~~ev~ 575 (584)
.+++.+||+.||.+||+ +.++.
T Consensus 248 --------~~li~~lL~~dP~~R~s~~~~l~ 270 (384)
T 4fr4_A 248 --------VSLLKKLLEPNPDQRFSQLSDVQ 270 (384)
T ss_dssp --------HHHHHHHSCSSGGGSCCSHHHHH
T ss_pred --------HHHHHHHhcCCHhHhcccHHHHH
Confidence 44667799999999998 66654
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.5e-30 Score=257.90 Aligned_cols=220 Identities=20% Similarity=0.293 Sum_probs=158.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||+||+|+..++ +.||||+++... .....+.+.+|++++++++|||||++++++.+++..++|||
T Consensus 26 ~~~lG~G~~g~V~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 26 LEKVGEGTYGVVYKAKDSQG------RIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp EEEEEECSSCEEEEEEETTS------CEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred hhhccCCCCeEEEEEEECCC------CEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 36799999999999998765 799999997652 22234678999999999999999999999999999999999
Q ss_pred cccCCcHHHH--------------------------Hhccc--ccccCCCCccccccCeEEecCCCccc-----------
Q 007935 426 FIRNGSLYAA--------------------------LHGFG--LNRLLPGTSKVTKNETIVTSGTGSRI----------- 466 (584)
Q Consensus 426 y~~~GsL~~~--------------------------L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~----------- 466 (584)
|+++ +|.++ ||+.| |++++++|+.+..++.++..|+|...
T Consensus 100 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~ 178 (311)
T 3niz_A 100 FMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTH 178 (311)
T ss_dssp CCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC---C
T ss_pred CCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecCCCcccccC
Confidence 9985 66444 44444 67888888888888888888887432
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC--CccccC-------
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP--LSEVID------- 537 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~d------- 537 (584)
..||+.|+|||++.....++.++||||+||++|||+||+.||.+..... .+..+.. ......+ .....+
T Consensus 179 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~ 256 (311)
T 3niz_A 179 EVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD-QLPKIFS-ILGTPNPREWPQVQELPLWKQR 256 (311)
T ss_dssp CCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT-HHHHHHH-HHCCCCTTTSGGGTTSHHHHSC
T ss_pred CcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHH-HHCCCChHHhhhhhccchhhhc
Confidence 3578999999986554678999999999999999999999998644322 2222222 1111110 000000
Q ss_pred ------hhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 538 ------PALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 538 ------~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
....... ......++.+++.+||+.||++|||+.|+++
T Consensus 257 ~~~~~~~~~~~~~-~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 257 TFQVFEKKPWSSI-IPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp CCCCCCCCCHHHH-STTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred ccccccCCcHHHh-CcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 0000000 0011235678999999999999999999986
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-30 Score=263.95 Aligned_cols=206 Identities=17% Similarity=0.208 Sum_probs=163.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLI 423 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV 423 (584)
.++||+|+||.||+|+...++ +.||||+++... .....+.+.+|..++..+ +|||||++++++.+.+..|+|
T Consensus 28 ~~~lG~G~fg~V~~~~~~~~~-----~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv 102 (353)
T 3txo_A 28 IRVLGKGSFGKVMLARVKETG-----DLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFV 102 (353)
T ss_dssp EEEEEEETTEEEEEEEETTTC-----CEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred EEEEeeCCCEEEEEEEEcCCC-----CEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEE
Confidence 468999999999999988765 899999997641 223346788999999998 799999999999999999999
Q ss_pred eecccCCcHHHHH-------------------------hcc--cccccCCCCccccccCeEEecCCCccc----------
Q 007935 424 SDFIRNGSLYAAL-------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 424 ~Ey~~~GsL~~~L-------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
|||+++|+|.+++ |+. -|++++++|+.+..++.++..|+|...
T Consensus 103 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~ 182 (353)
T 3txo_A 103 MEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTA 182 (353)
T ss_dssp EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC------
T ss_pred EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeecccCCcccc
Confidence 9999999996655 333 468888899988888888888887432
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIH 545 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~ 545 (584)
.+||+.|+|||++.. ..++.++||||+||++|||++|+.||.+. ...............++..+++.+.
T Consensus 183 ~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~G~~Pf~~~-----~~~~~~~~i~~~~~~~p~~~~~~~~---- 252 (353)
T 3txo_A 183 TFCGTPDYIAPEILQE-MLYGPAVDWWAMGVLLYEMLCGHAPFEAE-----NEDDLFEAILNDEVVYPTWLHEDAT---- 252 (353)
T ss_dssp ---CCGGGCCHHHHHH-HHCTTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHCCCCCCTTSCHHHH----
T ss_pred ccCCCcCeEChhhcCC-CCcCCccCCCcchHHHHHHHhCCCCCCCC-----CHHHHHHHHHcCCCCCCCCCCHHHH----
Confidence 368999999999554 67999999999999999999999999742 3344555555555545555555443
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCCh------HHHHH
Q 007935 546 AKRQVLATFHIALNCTELDPEFRPRM------RTVSE 576 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RPt~------~ev~~ 576 (584)
+++.+||+.||++||++ .|+++
T Consensus 253 ---------~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 253 ---------GILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp ---------HHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred ---------HHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 46666999999999998 66653
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.5e-30 Score=262.37 Aligned_cols=210 Identities=19% Similarity=0.282 Sum_probs=157.6
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC----cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCcee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD----ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKL 421 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~----~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~ 421 (584)
..+.||+|+||.||+|....++ +.||||++.... .....+.+.+|++++++++|||||++++++.+++..+
T Consensus 28 ~~~~lG~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 28 LCEVIGKGPFSVVRRCINRETG-----QQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp EEEEEEECSSEEEEEEEETTTC-----CEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred EeeEEeeCCCEEEEEEEECCCC-----CEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 3568999999999999987765 899999986431 1123478999999999999999999999999999999
Q ss_pred EeeecccCCcHHHHH-----------------------------hcc--cccccCCCCccccccCe---EEecCCCcc--
Q 007935 422 LISDFIRNGSLYAAL-----------------------------HGF--GLNRLLPGTSKVTKNET---IVTSGTGSR-- 465 (584)
Q Consensus 422 lV~Ey~~~GsL~~~L-----------------------------~~~--g~~~~~~~~~~i~~~~~---~~~~~~~~~-- 465 (584)
+||||+++|+|.+++ |+. .|++++++|+.+..++. ++..++|..
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~ 182 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ 182 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEE
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeE
Confidence 999999999996554 333 36778888887765433 667776632
Q ss_pred ---------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCcccc
Q 007935 466 ---------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVI 536 (584)
Q Consensus 466 ---------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 536 (584)
...||+.|+|||++.. ..++.++|||||||++|||+||+.||.+. -...............
T Consensus 183 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~------~~~~~~~i~~~~~~~~--- 252 (351)
T 3c0i_A 183 LGESGLVAGGRVGTPHFMAPEVVKR-EPYGKPVDVWGCGVILFILLSGCLPFYGT------KERLFEGIIKGKYKMN--- 252 (351)
T ss_dssp CCTTSCBCCCCCSCGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCSSCSS------HHHHHHHHHHTCCCCC---
T ss_pred ecCCCeeecCCcCCcCccCHHHHcC-CCCCchHhhHHHHHHHHHHHHCCCCCCCc------HHHHHHHHHcCCCCCC---
Confidence 2368999999999554 67999999999999999999999999752 1223333333222211
Q ss_pred ChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 537 DPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 537 d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+.....+ ...+.+++.+||+.||++|||+.|+++
T Consensus 253 -~~~~~~~-----s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 253 -PRQWSHI-----SESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp -HHHHTTS-----CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -ccccccC-----CHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1111111 124566888899999999999999985
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.7e-30 Score=249.99 Aligned_cols=210 Identities=22% Similarity=0.360 Sum_probs=164.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|...++ ..||+|++...... .+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~------~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (267)
T 3t9t_A 13 VQEIGSGQFGLVHLGYWLNK------DKVAIKTIREGAMS--EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEF 84 (267)
T ss_dssp EEEEEEETTEEEEEEEETTT------EEEEEEEECTTTBC--HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECC
T ss_pred eeEecCCCceeEEEEEecCC------CeEEEEEccccCCC--HHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeC
Confidence 46799999999999998765 78999999875433 27899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc------------
Q 007935 427 IRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI------------ 466 (584)
Q Consensus 427 ~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~------------ 466 (584)
+++|+|.++++. . -|.++.+.|+.+..+..++..+++...
T Consensus 85 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 164 (267)
T 3t9t_A 85 MEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 164 (267)
T ss_dssp CTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTS
T ss_pred CCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEccccccccccccccccccc
Confidence 999999877642 2 356777788877777778888876432
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCC-CCccccChhhhhhh
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERR-PLSEVIDPALVKEI 544 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~d~~~~~~~ 544 (584)
..++..|+|||++.. ..++.++||||||+++|||+| |+.||... .............. ..+...++
T Consensus 165 ~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~~g~~p~~~~-----~~~~~~~~i~~~~~~~~~~~~~~------ 232 (267)
T 3t9t_A 165 TKFPVKWASPEVFSF-SRYSSKSDVWSFGVLMWEVFSEGKIPYENR-----SNSEVVEDISTGFRLYKPRLAST------ 232 (267)
T ss_dssp TTCCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-----CHHHHHHHHHTTCCCCCCTTSCH------
T ss_pred ccccccccChhhhcC-CCccchhchhhhHHHHHHHhccCCCCCCCC-----CHHHHHHHHhcCCcCCCCccCcH------
Confidence 245678999999654 678999999999999999999 89998742 22333333332211 11222222
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
.+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 233 -------~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 233 -------HVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp -------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -------HHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 34557788999999999999999999999865
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-30 Score=264.42 Aligned_cols=209 Identities=14% Similarity=0.180 Sum_probs=154.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.++||+|+||.||+|....++ +.||||+++.... ...+.|.+|++++++++|||||++++++.+.+..++||||
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g-----~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~ 167 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATG-----LKLAAKIIKTRGM-KDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEY 167 (373)
T ss_dssp EEECC-----CEEEEEETTTC-----CEEEEEEEECCSH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ceEEecCcCEEEEEEEEcCCC-----cEEEEEEEccccc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeC
Confidence 467999999999999987765 8999999987432 3347899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHh--------------------------cc--cccccCCCCcccc--ccCeEEecCCCccc----------
Q 007935 427 IRNGSLYAALH--------------------------GF--GLNRLLPGTSKVT--KNETIVTSGTGSRI---------- 466 (584)
Q Consensus 427 ~~~GsL~~~L~--------------------------~~--g~~~~~~~~~~i~--~~~~~~~~~~~~~~---------- 466 (584)
+++|+|.+++. .. -|+++++.|+.+. .+..++..|+|...
T Consensus 168 ~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~ 247 (373)
T 2x4f_A 168 VDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKV 247 (373)
T ss_dssp CTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCC
T ss_pred CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcccccc
Confidence 99999976653 22 3677888887763 34567777776432
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhH
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 546 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 546 (584)
..||+.|+|||++. +..++.++|||||||++|||+||+.||.+. ...............+.....+.+
T Consensus 248 ~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~elltg~~pf~~~-----~~~~~~~~i~~~~~~~~~~~~~~~------ 315 (373)
T 2x4f_A 248 NFGTPEFLAPEVVN-YDFVSFPTDMWSVGVIAYMLLSGLSPFLGD-----NDAETLNNILACRWDLEDEEFQDI------ 315 (373)
T ss_dssp CCSSCTTCCHHHHT-TCBCCHHHHHHHHHHHHHHHHHSSCTTCCS-----SHHHHHHHHHHTCCCSCSGGGTTS------
T ss_pred ccCCCcEeChhhcc-CCCCCcHHhHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHhccCCCChhhhccC------
Confidence 35899999999854 468899999999999999999999999752 222333333333322211100111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 547 KRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 547 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
...+.+++.+||+.||.+|||+.|+++
T Consensus 316 ---~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 316 ---SEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp ---CHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ---CHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 124566888899999999999999986
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3e-30 Score=261.16 Aligned_cols=220 Identities=21% Similarity=0.271 Sum_probs=169.8
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
..+.||+|+||.||+|.....+.....+.||||.++........+.+.+|+++++++ +|||||++++++.+.+..++||
T Consensus 50 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 129 (333)
T 2i1m_A 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVIT 129 (333)
T ss_dssp EEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred eeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEE
Confidence 457899999999999998776655555789999998765545557899999999999 8999999999999999999999
Q ss_pred ecccCCcHHHHHhc---------------------------------------c--cccccCCCCccccccCeEEecCCC
Q 007935 425 DFIRNGSLYAALHG---------------------------------------F--GLNRLLPGTSKVTKNETIVTSGTG 463 (584)
Q Consensus 425 Ey~~~GsL~~~L~~---------------------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~ 463 (584)
||+++|+|.++++. . .|+++++.|+.+..+..++..|+|
T Consensus 130 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 209 (333)
T 2i1m_A 130 EYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFG 209 (333)
T ss_dssp ECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGGGEEEBCCCG
T ss_pred ecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCCCeEEECccc
Confidence 99999999877642 2 367788888888777888888876
Q ss_pred ccc-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC
Q 007935 464 SRI-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER 529 (584)
Q Consensus 464 ~~~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~ 529 (584)
... ..+|..|+|||++.. ..++.++|||||||++|||+| |+.||.+.... ............
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-~~~~~~~~~~~~-- 285 (333)
T 2i1m_A 210 LARDIMNDSNYIVKGNARLPVKWMAPESIFD-CVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN-SKFYKLVKDGYQ-- 285 (333)
T ss_dssp GGCCGGGCTTSEECSSCEECGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSS-HHHHHHHHHTCC--
T ss_pred cccccccccceeecCCCCCCccccCHHHhcc-CCCChHHHHHHHHHHHHHHHcCCCCCCcccchh-HHHHHHHhcCCC--
Confidence 432 235668999998654 679999999999999999999 99999753322 112222222111
Q ss_pred CCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 530 RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 530 ~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
...+...++ .+.+++.+||+.||.+|||+.|+++.|+++.
T Consensus 286 ~~~~~~~~~-------------~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~ 325 (333)
T 2i1m_A 286 MAQPAFAPK-------------NIYSIMQACWALEPTHRPTFQQICSFLQEQA 325 (333)
T ss_dssp CCCCTTCCH-------------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCCCH-------------HHHHHHHHHhccChhhCcCHHHHHHHHHHHH
Confidence 111222222 3455778899999999999999999999874
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=4.4e-30 Score=270.56 Aligned_cols=209 Identities=24% Similarity=0.370 Sum_probs=163.0
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
..+.||+|+||.||+|.+..+ ..||||+++..... .++|.+|+++|++++|||||++++++.+ +..++|||
T Consensus 188 ~~~~lG~G~fg~Vy~~~~~~~------~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e 258 (452)
T 1fmk_A 188 LEVKLGQGCFGEVWMGTWNGT------TRVAIKTLKPGTMS--PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 258 (452)
T ss_dssp EEEEEEECSSCEEEEEEETTT------EEEEEEECCTTSSC--HHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred eeeeecCCCCeEEEEEEECCC------ceEEEEEeccCCCC--HHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEeh
Confidence 356899999999999998775 78999999865332 3789999999999999999999999866 77899999
Q ss_pred cccCCcHHHHHhc-----------------------------ccccccCCCCccccccCeEEecCCCccc----------
Q 007935 426 FIRNGSLYAALHG-----------------------------FGLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 426 y~~~GsL~~~L~~-----------------------------~g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
||++|+|.++|+. ..|+++++.|+.+..+..++..|+|...
T Consensus 259 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 338 (452)
T 1fmk_A 259 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 338 (452)
T ss_dssp CCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC----------
T ss_pred hhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCccceecCCCceecc
Confidence 9999999877752 2467888888888777788888887542
Q ss_pred --ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC-CCCccccChhhhh
Q 007935 467 --SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER-RPLSEVIDPALVK 542 (584)
Q Consensus 467 --~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~d~~~~~ 542 (584)
..++..|+|||++.. ..++.++|||||||++|||+| |+.||.+.. ..+......... .+.+..+++
T Consensus 339 ~~~~~~~~y~aPE~~~~-~~~~~~sDvwslG~~l~el~t~g~~P~~~~~-----~~~~~~~i~~~~~~~~~~~~~~---- 408 (452)
T 1fmk_A 339 QGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELTTKGRVPYPGMV-----NREVLDQVERGYRMPCPPECPE---- 408 (452)
T ss_dssp ----CCGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC-----HHHHHHHHHTTCCCCCCTTSCH----
T ss_pred cCCcccccccCHhHHhc-CCCCccccHHhHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHcCCCCCCCCCCCH----
Confidence 235678999998655 589999999999999999999 999997532 223333322221 112222222
Q ss_pred hhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 543 EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 543 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.+.+++.+||+.||++|||+.++++.|+++.
T Consensus 409 ---------~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~ 439 (452)
T 1fmk_A 409 ---------SLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 439 (452)
T ss_dssp ---------HHHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred ---------HHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 3456888899999999999999999999874
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-30 Score=264.95 Aligned_cols=208 Identities=19% Similarity=0.244 Sum_probs=149.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|+...++ +.||||+++.... .+.+.+|++++++++|||||++++++.+.+..++||||
T Consensus 58 ~~~lG~G~~g~Vy~~~~~~~~-----~~vavK~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 129 (349)
T 2w4o_A 58 ESELGRGATSIVYRCKQKGTQ-----KPYALKVLKKTVD---KKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLEL 129 (349)
T ss_dssp EEEEEECSSEEEEEEEETTTC-----CEEEEEEEEC-------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred eeEEeeCCCEEEEEEEECCCC-----cEEEEEEeccchh---HHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEe
Confidence 467999999999999998765 7999999986432 26788999999999999999999999999999999999
Q ss_pred ccCCcHHHHHh-------------------------cc--cccccCCCCccccc---cCeEEecCCCcc----------c
Q 007935 427 IRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTK---NETIVTSGTGSR----------I 466 (584)
Q Consensus 427 ~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~---~~~~~~~~~~~~----------~ 466 (584)
+++|+|.+++. +. .|+++++.|+.+.. +..++..|+|.. .
T Consensus 130 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~ 209 (349)
T 2w4o_A 130 VTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKT 209 (349)
T ss_dssp CCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC-------------
T ss_pred CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCccccccc
Confidence 99999976664 22 35777888877754 566777777643 2
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhH
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 546 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 546 (584)
..||+.|+|||++. +..++.++|||||||++|||+||+.||..... ....................+.+
T Consensus 210 ~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g~~pf~~~~~----~~~~~~~i~~~~~~~~~~~~~~~------ 278 (349)
T 2w4o_A 210 VCGTPGYCAPEILR-GCAYGPEVDMWSVGIITYILLCGFEPFYDERG----DQFMFRRILNCEYYFISPWWDEV------ 278 (349)
T ss_dssp ---CGGGSCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTC----HHHHHHHHHTTCCCCCTTTTTTS------
T ss_pred ccCCCCccCHHHhc-CCCCCcccchHHHHHHHHHHHhCCCCCCCCcc----cHHHHHHHHhCCCccCCchhhhC------
Confidence 36899999999955 46899999999999999999999999975322 12223333332221111111111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 547 KRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 547 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
...+.+++.+||+.||++|||+.|+++
T Consensus 279 ---~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 279 ---SLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp ---CHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ---CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 124456888899999999999999986
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.1e-30 Score=263.76 Aligned_cols=218 Identities=23% Similarity=0.314 Sum_probs=168.7
Q ss_pred cceeceeecCceEEEEEecCCC--CCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeE
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGS--GMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLL 422 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~--~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~l 422 (584)
..+.||+|+||.||+|+....+ .......||||+++........+++.+|+++++++ +|||||+++++|.+++..++
T Consensus 73 i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~l 152 (382)
T 3tt0_A 73 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYV 152 (382)
T ss_dssp EEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred eeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEE
Confidence 3568999999999999975432 12233689999998765555567899999999999 99999999999999999999
Q ss_pred eeecccCCcHHHHHhc-----------------------------------------c--cccccCCCCccccccCeEEe
Q 007935 423 ISDFIRNGSLYAALHG-----------------------------------------F--GLNRLLPGTSKVTKNETIVT 459 (584)
Q Consensus 423 V~Ey~~~GsL~~~L~~-----------------------------------------~--g~~~~~~~~~~i~~~~~~~~ 459 (584)
||||+++|+|.+++.. . .|+++++.|+.+..+..++.
T Consensus 153 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL 232 (382)
T 3tt0_A 153 IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKI 232 (382)
T ss_dssp EEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEE
T ss_pred EEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEcCCCcEEE
Confidence 9999999999888743 1 35778888888877788888
Q ss_pred cCCCccc-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHH
Q 007935 460 SGTGSRI-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKA 525 (584)
Q Consensus 460 ~~~~~~~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~ 525 (584)
.|||... ..+|..|+|||++. +..++.++|||||||++|||+| |+.||... ...++....
T Consensus 233 ~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~~DiwslG~il~ellt~g~~p~~~~-----~~~~~~~~~ 306 (382)
T 3tt0_A 233 ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-----PVEELFKLL 306 (382)
T ss_dssp CSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHH-SCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC-----CHHHHHHHH
T ss_pred cccCcccccccccccccccCCCCCcceeCHHHhc-CCCCCchhHHHHHHHHHHHHHhCCCCCCCCC-----CHHHHHHHH
Confidence 8887432 24567899999955 4689999999999999999999 99999742 233333333
Q ss_pred hhcCC-CCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 526 FRERR-PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 526 ~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
..... ..+..+++ .+.+++.+||+.||++|||+.||++.|+++.
T Consensus 307 ~~~~~~~~~~~~~~-------------~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 351 (382)
T 3tt0_A 307 KEGHRMDKPSNCTN-------------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 351 (382)
T ss_dssp HTTCCCCCCSSCCH-------------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HcCCCCCCCccCCH-------------HHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 32221 12222333 3455778899999999999999999999874
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=8.7e-30 Score=258.43 Aligned_cols=206 Identities=14% Similarity=0.218 Sum_probs=159.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLI 423 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV 423 (584)
.+.||+|+||.||+|+...++ +.||||+++... .....+.+.+|+.++.++ +|||||++++++.+.+..++|
T Consensus 14 ~~~lG~G~fg~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 14 LRVIGRGSYAKVLLVRLKKTD-----RIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp EEEEEECSSEEEEEEEETTTT-----EEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred EEEEEecCCeEEEEEEECCCC-----CEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 468999999999999998765 899999998652 233346788999999998 899999999999999999999
Q ss_pred eecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCccc----------
Q 007935 424 SDFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
|||+++|+|.+++. .. -|++++++|+.+..++.++..++|...
T Consensus 89 ~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~~~~ 168 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTS 168 (345)
T ss_dssp ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTCCBC
T ss_pred EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccccccccCCCCccc
Confidence 99999999976653 33 367888888888888888888876432
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCC----CCcHHHHHHHHhhcCCCCccccChhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEND----GKGLESLVRKAFRERRPLSEVIDPALV 541 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~d~~~~ 541 (584)
..||+.|+|||++. +..++.++|||||||++|||++|+.||...... .................++..+++.+
T Consensus 169 ~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~s~~~- 246 (345)
T 3a8x_A 169 TFCGTPNYIAPEILR-GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKA- 246 (345)
T ss_dssp CCCSCGGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCCTTSCHHH-
T ss_pred ccCCCccccCccccC-CCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCCCCCCHHH-
Confidence 36899999999955 468999999999999999999999999753221 11222233333344444444444444
Q ss_pred hhhhHHHHHHHHHHHHhcccCCCCCCCCCh
Q 007935 542 KEIHAKRQVLATFHIALNCTELDPEFRPRM 571 (584)
Q Consensus 542 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~ 571 (584)
.+++.+||+.||++||++
T Consensus 247 ------------~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 247 ------------ASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp ------------HHHHHHHTCSSTTTSTTC
T ss_pred ------------HHHHHHHhcCCHhHCCCC
Confidence 446667999999999996
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.2e-31 Score=265.46 Aligned_cols=206 Identities=19% Similarity=0.221 Sum_probs=157.4
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|....++ +.||||++.... .....+.+.+|++++++++|||||++++++.+.+..++||
T Consensus 14 ~~~lG~G~~g~V~~a~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 14 RETLGEGSFGKVKLATHYKTQ-----QKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTC-----CEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred EEEEecCCCeEEEEEEECCCC-----CEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 467999999999999987765 899999997541 1222367999999999999999999999999999999999
Q ss_pred ecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCcc----------cc
Q 007935 425 DFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR----------IS 467 (584)
Q Consensus 425 Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~----------~~ 467 (584)
||+ +|+|.+++. +. .|++++++|+.+..+..++..|||.. ..
T Consensus 89 E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~~~~ 167 (336)
T 3h4j_B 89 EYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS 167 (336)
T ss_dssp CCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBTTCCC
T ss_pred ECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCcccccc
Confidence 999 788876653 32 46888999998888888888888743 24
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHH
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAK 547 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 547 (584)
.||+.|+|||++......+.++|||||||++|||++|+.||.+...... ..........+++.+++.
T Consensus 168 ~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~-----~~~i~~~~~~~p~~~s~~-------- 234 (336)
T 3h4j_B 168 CGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL-----FKKVNSCVYVMPDFLSPG-------- 234 (336)
T ss_dssp TTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC-----BCCCCSSCCCCCTTSCHH--------
T ss_pred cCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH-----HHHHHcCCCCCcccCCHH--------
Confidence 6899999999965433347899999999999999999999975332210 000111111223333333
Q ss_pred HHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 548 RQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 548 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+.+++.+||+.||.+|||+.|+++
T Consensus 235 -----~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 235 -----AQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp -----HHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred -----HHHHHHHHcCCChhHCcCHHHHHh
Confidence 345778899999999999999974
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=4.8e-30 Score=260.76 Aligned_cols=206 Identities=15% Similarity=0.216 Sum_probs=164.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|+...++ +.||||+++... .....+.+.+|+.++++++|||||++++++.+.+..++||
T Consensus 46 ~~~lG~G~~g~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 46 IKTLGTGSFGRVMLVKHKESG-----NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp EEEEEECSSCEEEEEEETTTC-----CEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred EEEeecCcCcEEEEEEECCCC-----CEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 468999999999999988765 899999997542 2233477899999999999999999999999999999999
Q ss_pred ecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCcc--------cccC
Q 007935 425 DFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR--------ISAI 469 (584)
Q Consensus 425 Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~--------~~~g 469 (584)
||+++|+|.+++. .. .|++++++|+.+..++.++..++|.. ...|
T Consensus 121 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~~~~g 200 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCG 200 (350)
T ss_dssp ECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCCEE
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceeccCCcccccC
Confidence 9999999976664 22 36888888988888888888888743 2468
Q ss_pred CCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHHH
Q 007935 470 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQ 549 (584)
Q Consensus 470 t~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 549 (584)
|+.|+|||++.. ..++.++|||||||++|||++|+.||... ...............++..+++.+
T Consensus 201 t~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~~~-----~~~~~~~~i~~~~~~~p~~~~~~~--------- 265 (350)
T 1rdq_E 201 TPEALAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFAD-----QPIQIYEKIVSGKVRFPSHFSSDL--------- 265 (350)
T ss_dssp CGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHCCCCCCTTCCHHH---------
T ss_pred CccccCHHHhcC-CCCCCcCCEecccHhHhHHhhCCCCCCCC-----CHHHHHHHHHcCCCCCCCCCCHHH---------
Confidence 999999999554 68999999999999999999999999742 234444555554444455555544
Q ss_pred HHHHHHHHhcccCCCCCCCCC-----hHHHHH
Q 007935 550 VLATFHIALNCTELDPEFRPR-----MRTVSE 576 (584)
Q Consensus 550 ~~~~~~l~~~Cl~~~P~~RPt-----~~ev~~ 576 (584)
.+++.+||+.||.+||+ +.||.+
T Consensus 266 ----~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 266 ----KDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp ----HHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred ----HHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 34666799999999998 787764
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.4e-30 Score=253.62 Aligned_cols=207 Identities=17% Similarity=0.236 Sum_probs=153.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcc-------------------------hhhHhHHHHHHHHHh
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-------------------------WRFKDFESEVEAIAR 401 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~-------------------------~~~~~f~~Ei~~l~~ 401 (584)
.+.||+|+||.||+|+...++ +.||||++...... ...+.|.+|++++++
T Consensus 18 ~~~lG~G~~g~Vy~a~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 92 (298)
T 2zv2_A 18 KDEIGKGSYGVVKLAYNENDN-----TYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK 92 (298)
T ss_dssp EEEEEC--CCEEEEEEETTTT-----EEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred EeEEeecCCEEEEEEEECCCC-----cEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence 467999999999999987765 89999999764211 123678999999999
Q ss_pred cCCCceeeeeEEEEe--CCceeEeeecccCCcHH------------------------HHHhccc--ccccCCCCccccc
Q 007935 402 VQHPNIVRLKAFYYA--NDEKLLISDFIRNGSLY------------------------AALHGFG--LNRLLPGTSKVTK 453 (584)
Q Consensus 402 l~HpnIV~l~g~~~~--~~~~~lV~Ey~~~GsL~------------------------~~L~~~g--~~~~~~~~~~i~~ 453 (584)
++|||||++++++.+ .+..++||||+++|+|. .|||..| |+++++.|+.+..
T Consensus 93 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~ 172 (298)
T 2zv2_A 93 LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGE 172 (298)
T ss_dssp CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT
T ss_pred CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECC
Confidence 999999999999987 56789999999999872 5566655 6788888888887
Q ss_pred cCeEEecCCCcc-----------cccCCCcccCccccccCCC--CCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHH
Q 007935 454 NETIVTSGTGSR-----------ISAISNVYLAPEARIYGSK--FTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLES 520 (584)
Q Consensus 454 ~~~~~~~~~~~~-----------~~~gt~~y~aPE~~~~~~~--~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~ 520 (584)
++.++..|+|.. ...||+.|+|||++..... ++.++|||||||++|||++|+.||... ....
T Consensus 173 ~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~-----~~~~ 247 (298)
T 2zv2_A 173 DGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE-----RIMC 247 (298)
T ss_dssp TSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCS-----SHHH
T ss_pred CCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCc-----cHHH
Confidence 888888887643 2368999999998654322 478899999999999999999999742 2233
Q ss_pred HHHHHhhcCCCCc--cccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 521 LVRKAFRERRPLS--EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 521 ~~~~~~~~~~~~~--~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+...........+ ..+++ .+.+++.+||+.||++|||+.|+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~-------------~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 248 LHSKIKSQALEFPDQPDIAE-------------DLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp HHHHHHHCCCCCCSSSCCCH-------------HHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHHHhcccCCCCCccccCH-------------HHHHHHHHHhhcChhhCCCHHHHhc
Confidence 3333332222211 12222 3455778899999999999999874
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.9e-30 Score=257.06 Aligned_cols=216 Identities=20% Similarity=0.323 Sum_probs=164.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|+....+.. ....||+|.+.........+.+.+|+.++++++|||||+++++|. ++..++||||
T Consensus 18 ~~~lG~G~~g~Vy~~~~~~~~~~-~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~ 95 (325)
T 3kex_A 18 LKVLGSGVFGTVHKGVWIPEGES-IKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQY 95 (325)
T ss_dssp EEEEECCSSCEEEEEEECCTTCS-CCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEEEC
T ss_pred eeeeeecCCceEEEEEEcCCCce-EEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEEEe
Confidence 46799999999999998765422 225699999876544444577899999999999999999999885 5679999999
Q ss_pred ccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc------------
Q 007935 427 IRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI------------ 466 (584)
Q Consensus 427 ~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~------------ 466 (584)
+++|+|.++++. . -|+++++.|+.+..++.++..+||...
T Consensus 96 ~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 175 (325)
T 3kex_A 96 LPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYS 175 (325)
T ss_dssp CTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTCCC--
T ss_pred CCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCcccccCccccccccc
Confidence 999999776642 2 468888999988888888888887432
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEI 544 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~ 544 (584)
..||..|+|||++.. ..++.++|||||||++|||+| |+.||.+.... .+...+... .....+..+++.+.
T Consensus 176 ~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~--- 247 (325)
T 3kex_A 176 EAKTPIKWMALESIHF-GKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA--EVPDLLEKG--ERLAQPQICTIDVY--- 247 (325)
T ss_dssp ---CCTTTSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT--HHHHHHHTT--CBCCCCTTBCTTTT---
T ss_pred CCCCcccccChHHhcc-CCCChhhHhHHhHHHHHHHHhCCCCCccccCHH--HHHHHHHcC--CCCCCCCcCcHHHH---
Confidence 246678999999654 679999999999999999999 99999853322 222222211 12222334444443
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
+++.+||+.||++|||+.|+++.|+++.
T Consensus 248 ----------~li~~~l~~dp~~Rps~~el~~~l~~~~ 275 (325)
T 3kex_A 248 ----------MVMVKCWMIDENIRPTFKELANEFTRMA 275 (325)
T ss_dssp ----------HHHHHHTCSCTTTSCCHHHHHHHHHHHT
T ss_pred ----------HHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 4667799999999999999999999875
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.6e-30 Score=277.66 Aligned_cols=212 Identities=20% Similarity=0.280 Sum_probs=163.3
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeecc
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 427 (584)
..||+|+||.||+|.+...+ ....||||+++........++|.+|+++|++++|||||+++++|.+ +..++|||||
T Consensus 342 ~~LG~G~fG~Vy~~~~~~~~---~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~ 417 (613)
T 2ozo_A 342 IELGCGNFGSVRQGVYRMRK---KQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMA 417 (613)
T ss_dssp EEEEECSSSEEEEEEEECSS---CEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECC
T ss_pred cEEecCCCcEEEEEEEecCC---CcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeC
Confidence 36999999999999876421 1168999999876444456889999999999999999999999976 6799999999
Q ss_pred cCCcHHHHHhc----------------------------ccccccCCCCccccccCeEEecCCCcccc------------
Q 007935 428 RNGSLYAALHG----------------------------FGLNRLLPGTSKVTKNETIVTSGTGSRIS------------ 467 (584)
Q Consensus 428 ~~GsL~~~L~~----------------------------~g~~~~~~~~~~i~~~~~~~~~~~~~~~~------------ 467 (584)
++|+|.++|+. ..|+++++.|+.+..+..++..|||....
T Consensus 418 ~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 497 (613)
T 2ozo_A 418 GGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARS 497 (613)
T ss_dssp TTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC----------
T ss_pred CCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeecc
Confidence 99999877742 24678888898888888888888875421
Q ss_pred --cCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC-CCCccccChhhhhh
Q 007935 468 --AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER-RPLSEVIDPALVKE 543 (584)
Q Consensus 468 --~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~d~~~~~~ 543 (584)
.+|..|+|||++.. ..++.++|||||||++|||+| |+.||.+... .+......... ...+..+++
T Consensus 498 ~~~~~~~y~APE~~~~-~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~-----~~~~~~i~~~~~~~~p~~~~~----- 566 (613)
T 2ozo_A 498 AGKWPLKWYAPECINF-RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG-----PEVMAFIEQGKRMECPPECPP----- 566 (613)
T ss_dssp ----CCTTSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCS-----HHHHHHHHTTCCCCCCTTCCH-----
T ss_pred CCCCccceeCHhhhcC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCH-----HHHHHHHHcCCCCCCCCcCCH-----
Confidence 24578999999654 689999999999999999998 9999975332 22222222221 112222333
Q ss_pred hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 544 IHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 544 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.+.+++..||+.||++|||+.+|++.|+.+.
T Consensus 567 --------~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~ 597 (613)
T 2ozo_A 567 --------ELYALMSDCWIYKWEDRPDFLTVEQRMRACY 597 (613)
T ss_dssp --------HHHHHHHHTTCSSTTTSCCHHHHHHHHHHHH
T ss_pred --------HHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 3456788899999999999999999999863
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=4.9e-30 Score=254.90 Aligned_cols=221 Identities=24% Similarity=0.331 Sum_probs=161.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC--CceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN--DEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~--~~~~lV~ 424 (584)
.+.||+|+||.||+|++.... ....+.||||++... .....+.|.+|++++++++|||||++++++... ...++||
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~-~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 92 (295)
T 3ugc_A 15 LQQLGKGNFGSVEMCRYDPLQ-DNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM 92 (295)
T ss_dssp EEEEEECSSEEEEEEEECTTC-SSCCEEEEEEEESCC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEE
T ss_pred hheeeccCCEEEEEEEEeccc-CCCCcEEEEEEcccC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEE
Confidence 467999999999999853211 111289999999864 333457899999999999999999999999654 5689999
Q ss_pred ecccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc----------
Q 007935 425 DFIRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 425 Ey~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
||+++|+|.++++. . -|+++++.|+.+..+..++..|+|...
T Consensus 93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 172 (295)
T 3ugc_A 93 EYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFK 172 (295)
T ss_dssp ECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSCC----------
T ss_pred EeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCcccccccCCcceee
Confidence 99999999777642 2 367888888888888888888877432
Q ss_pred ----ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCC----------CCCcHHHHHHHHhhc--CC
Q 007935 467 ----SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEN----------DGKGLESLVRKAFRE--RR 530 (584)
Q Consensus 467 ----~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~----------~~~~l~~~~~~~~~~--~~ 530 (584)
..++..|+|||++.. ..++.++|||||||++|||+||..|+..... ............... ..
T Consensus 173 ~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (295)
T 3ugc_A 173 VKEPGESPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 251 (295)
T ss_dssp ---CTTCGGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCC
T ss_pred eccCCCCccceeCcHHhcC-CCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhccCcC
Confidence 235667999999654 6899999999999999999999999864210 000001011111111 11
Q ss_pred CCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 531 PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 531 ~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
+.+..++ ..+.+++.+||+.||++|||+.|++++|+++++
T Consensus 252 ~~~~~~~-------------~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~ 291 (295)
T 3ugc_A 252 PRPDGCP-------------DEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291 (295)
T ss_dssp CCCTTCC-------------HHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCcCcC-------------HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 1122222 245668888999999999999999999999875
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=6.2e-30 Score=260.04 Aligned_cols=221 Identities=23% Similarity=0.288 Sum_probs=165.0
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
..+.||+|+||.||+|+............||||.++........+.+.+|+.+++++ +||||+++++++...+..++||
T Consensus 49 ~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 128 (344)
T 1rjb_A 49 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIF 128 (344)
T ss_dssp EEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred eeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEE
Confidence 467899999999999997543333334789999998654444558899999999999 9999999999999999999999
Q ss_pred ecccCCcHHHHHhc------------------------------------------------c--cccccCCCCcccccc
Q 007935 425 DFIRNGSLYAALHG------------------------------------------------F--GLNRLLPGTSKVTKN 454 (584)
Q Consensus 425 Ey~~~GsL~~~L~~------------------------------------------------~--g~~~~~~~~~~i~~~ 454 (584)
||+++|+|.+++.. . .|+++++.|+.+..+
T Consensus 129 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~ 208 (344)
T 1rjb_A 129 EYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHG 208 (344)
T ss_dssp ECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETT
T ss_pred ecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEcCC
Confidence 99999999877642 1 357788888888777
Q ss_pred CeEEecCCCccc-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHH
Q 007935 455 ETIVTSGTGSRI-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLES 520 (584)
Q Consensus 455 ~~~~~~~~~~~~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~ 520 (584)
..++..++|... ..||+.|+|||++.. ..++.++|||||||++|||+| |+.||.+..... ....
T Consensus 209 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-~~~~ 286 (344)
T 1rjb_A 209 KVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFE-GIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA-NFYK 286 (344)
T ss_dssp TEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-HHHH
T ss_pred CcEEeCCCccCcccccCccceeccCccCccCccCHHHhcc-CCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHH-HHHH
Confidence 888888876432 245678999998655 679999999999999999998 999997643321 1222
Q ss_pred HHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 521 LVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 521 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
.+.... ....+..+++ .+.+++.+||+.||.+|||+.|+++.|+.+..
T Consensus 287 ~~~~~~--~~~~~~~~~~-------------~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 334 (344)
T 1rjb_A 287 LIQNGF--KMDQPFYATE-------------EIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLA 334 (344)
T ss_dssp HHHTTC--CCCCCTTCCH-------------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred HHhcCC--CCCCCCCCCH-------------HHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence 221111 1111222222 34557788999999999999999999998753
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=99.97 E-value=6.9e-30 Score=261.05 Aligned_cols=208 Identities=21% Similarity=0.358 Sum_probs=154.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+++...++ +.||||++...... .+.+.+|+.++++++|||||++++++.+.+..++||||
T Consensus 25 ~~~lG~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 25 VKDIGSGNFGVARLMRDKLTK-----ELVAVKYIERGAAI--DENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp EEEESSSTTSSEEEEEETTTC-----CEEEEEEEESSTTS--CHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred EEEeccCCCEEEEEEEECCCC-----cEEEEEEEecCccc--cHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 467999999999999998765 89999999865332 26789999999999999999999999999999999999
Q ss_pred ccCCcHHHHH-------------------------hccc--ccccCCCCccccccCe--EEecCCCcc----------cc
Q 007935 427 IRNGSLYAAL-------------------------HGFG--LNRLLPGTSKVTKNET--IVTSGTGSR----------IS 467 (584)
Q Consensus 427 ~~~GsL~~~L-------------------------~~~g--~~~~~~~~~~i~~~~~--~~~~~~~~~----------~~ 467 (584)
+++|+|.+++ |+.| |+++++.|+.+..+.. ++..++|.. ..
T Consensus 98 ~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~~~~ 177 (361)
T 3uc3_A 98 ASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST 177 (361)
T ss_dssp CCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC------------
T ss_pred CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccCCCCCC
Confidence 9999997655 3333 6777888877765543 777777643 24
Q ss_pred cCCCcccCccccccCCCCCCc-cchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCcc--ccChhhhhhh
Q 007935 468 AISNVYLAPEARIYGSKFTQK-CDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSE--VIDPALVKEI 544 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~k-sDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~d~~~~~~~ 544 (584)
.||+.|+|||++.. ..++.+ +|||||||++|||++|+.||.+.... ................++. .+++
T Consensus 178 ~gt~~y~aPE~~~~-~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~s~------ 249 (361)
T 3uc3_A 178 VGTPAYIAPEVLLR-QEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEP-RDYRKTIQRILSVKYSIPDDIRISP------ 249 (361)
T ss_dssp ---CTTSCHHHHHC-SSCCHHHHHHHHHHHHHHHHHHSSCSCC----C-CCHHHHHHHHHTTCCCCCTTSCCCH------
T ss_pred cCCCCcCChhhhcC-CCCCCCeeeeehhHHHHHHHHhCCCCCCCCccH-HHHHHHHHHHhcCCCCCCCcCCCCH------
Confidence 68999999999655 455544 99999999999999999999864332 2344444444443332222 2233
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||+.||++|||+.|+++
T Consensus 250 -------~~~~li~~~L~~dP~~Rps~~ell~ 274 (361)
T 3uc3_A 250 -------ECCHLISRIFVADPATRISIPEIKT 274 (361)
T ss_dssp -------HHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred -------HHHHHHHHHccCChhHCcCHHHHHh
Confidence 3345777899999999999999985
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.1e-30 Score=261.30 Aligned_cols=205 Identities=18% Similarity=0.274 Sum_probs=162.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLI 423 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV 423 (584)
.++||+|+||.||+|+...++ +.||||+++... .....+.+.+|..++.++ +|||||++++++.+.+..++|
T Consensus 22 ~~~lG~G~fg~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv 96 (345)
T 1xjd_A 22 HKMLGKGSFGKVFLAEFKKTN-----QFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV 96 (345)
T ss_dssp EEEEEECSSSEEEEEEETTTT-----EEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred EEEEeeCCCeEEEEEEECCCC-----CEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEE
Confidence 468999999999999998765 899999997641 123346788999999987 999999999999999999999
Q ss_pred eecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCcc-----------
Q 007935 424 SDFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR----------- 465 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~----------- 465 (584)
|||+++|+|.+++. .. .|++++++|+.+..++.++..++|..
T Consensus 97 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~ 176 (345)
T 1xjd_A 97 MEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTN 176 (345)
T ss_dssp EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBC
T ss_pred EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhcccCCCccc
Confidence 99999999976654 33 46788888888888888888887643
Q ss_pred cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhh
Q 007935 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIH 545 (584)
Q Consensus 466 ~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~ 545 (584)
..+||+.|+|||++. +..++.++|||||||++|||++|+.||.+. ...............++..+++.+
T Consensus 177 ~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g~~Pf~~~-----~~~~~~~~i~~~~~~~p~~~s~~~----- 245 (345)
T 1xjd_A 177 TFCGTPDYIAPEILL-GQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ-----DEEELFHSIRMDNPFYPRWLEKEA----- 245 (345)
T ss_dssp CCCSCGGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHCCCCCCTTSCHHH-----
T ss_pred CCCCCcccCChhhhc-CCCCCChhhhHHHHHHHHHHhcCCCCCCCC-----CHHHHHHHHHhCCCCCCcccCHHH-----
Confidence 236899999999955 468999999999999999999999999742 234444444444444444444444
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCChH-HHH
Q 007935 546 AKRQVLATFHIALNCTELDPEFRPRMR-TVS 575 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~-ev~ 575 (584)
.+++.+||+.||++||++. |+.
T Consensus 246 --------~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 246 --------KDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp --------HHHHHHHSCSSGGGSBTTBSCGG
T ss_pred --------HHHHHHHhcCCHhHcCCChHHHH
Confidence 4466779999999999997 654
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-29 Score=256.90 Aligned_cols=216 Identities=25% Similarity=0.357 Sum_probs=163.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|.....++ .....||||.++........+.|.+|++++++++|||||++++++.+.+..++||||
T Consensus 49 ~~~lG~G~~g~Vy~~~~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 127 (333)
T 1mqb_A 49 QKVIGAGEFGEVYKGMLKTSSG-KKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEY 127 (333)
T ss_dssp EEEEEECSSSEEEEEEEEC----CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred ccEEecCCCeEEEEEEEecCCC-CccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeC
Confidence 4789999999999999865421 122579999998765444557899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc------------
Q 007935 427 IRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI------------ 466 (584)
Q Consensus 427 ~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~------------ 466 (584)
+++|+|.++++. . -|+++++.|+.+..+..++..++|...
T Consensus 128 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 207 (333)
T 1mqb_A 128 MENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTT 207 (333)
T ss_dssp CTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC--------------
T ss_pred CCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchhhcccccccccc
Confidence 999999777642 2 367778888888777778888876432
Q ss_pred --ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC-CCCccccChhhhh
Q 007935 467 --SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER-RPLSEVIDPALVK 542 (584)
Q Consensus 467 --~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~d~~~~~ 542 (584)
..+|..|+|||++. +..++.++|||||||++|||+| |+.||.... ............ .+....+++
T Consensus 208 ~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~ellt~g~~pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~---- 277 (333)
T 1mqb_A 208 SGGKIPIRWTAPEAIS-YRKFTSASDVWSFGIVMWEVMTYGERPYWELS-----NHEVMKAINDGFRLPTPMDCPS---- 277 (333)
T ss_dssp ---CCCGGGSCHHHHH-SCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----HHHHHHHHHTTCCCCCCTTCBH----
T ss_pred CCCCccccccCchhcc-cCCCCchhhhHHHHHHHHHHHcCCCCCcccCC-----HHHHHHHHHCCCcCCCcccCCH----
Confidence 13466899999954 4689999999999999999999 999997422 223333332221 111112222
Q ss_pred hhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 543 EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 543 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.+.+++.+||+.||++||++.|+++.|+++.
T Consensus 278 ---------~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~ 308 (333)
T 1mqb_A 278 ---------AIYQLMMQCWQQERARRPKFADIVSILDKLI 308 (333)
T ss_dssp ---------HHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred ---------HHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 3456888899999999999999999999874
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=8.4e-30 Score=255.37 Aligned_cols=220 Identities=21% Similarity=0.285 Sum_probs=166.3
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
..+.||+|+||.||+|+..........+.||||+++........+.+.+|+++++++ +|||||++++++.+.+..++||
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~ 106 (313)
T 1t46_A 27 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVIT 106 (313)
T ss_dssp EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred HHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEE
Confidence 457899999999999986442222333899999998765444557899999999999 9999999999999999999999
Q ss_pred ecccCCcHHHHHhc-------------------------------------------c--cccccCCCCccccccCeEEe
Q 007935 425 DFIRNGSLYAALHG-------------------------------------------F--GLNRLLPGTSKVTKNETIVT 459 (584)
Q Consensus 425 Ey~~~GsL~~~L~~-------------------------------------------~--g~~~~~~~~~~i~~~~~~~~ 459 (584)
||+++|+|.++++. . -|+++++.|+.+..+..++.
T Consensus 107 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl 186 (313)
T 1t46_A 107 EYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKI 186 (313)
T ss_dssp ECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEE
T ss_pred ecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEcCCCCEEE
Confidence 99999999887642 1 35677778887777777888
Q ss_pred cCCCccc-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHH
Q 007935 460 SGTGSRI-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKA 525 (584)
Q Consensus 460 ~~~~~~~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~ 525 (584)
.++|... ..+|..|+|||++.. ..++.++|||||||++|||+| |+.||....... .........
T Consensus 187 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~~~~~~~~~ 264 (313)
T 1t46_A 187 CDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFN-CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS-KFYKMIKEG 264 (313)
T ss_dssp CCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH-HHHHHHHHT
T ss_pred ccccccccccccccceeccCCCCcceeeChHHhcC-CCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh-HHHHHhccC
Confidence 7776432 235667999998655 689999999999999999999 999997643221 122222211
Q ss_pred hhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 526 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 526 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.. ......+++ .+.+++.+||+.||.+|||+.|+++.|+++.
T Consensus 265 ~~--~~~~~~~~~-------------~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 306 (313)
T 1t46_A 265 FR--MLSPEHAPA-------------EMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 306 (313)
T ss_dssp CC--CCCCTTSCH-------------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CC--CCCcccCCH-------------HHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 11 111222222 3455778899999999999999999999874
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-30 Score=265.23 Aligned_cols=216 Identities=20% Similarity=0.322 Sum_probs=161.3
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEe-CCceeEee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYA-NDEKLLIS 424 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~-~~~~~lV~ 424 (584)
..+.||+|+||.||+|+.....+ ....||||.++........++|.+|+.++++++|||||+++++|.+ ++..++||
T Consensus 93 ~~~~LG~G~fg~Vy~~~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~ 170 (373)
T 3c1x_A 93 FNEVIGRGHFGCVYHGTLLDNDG--KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 170 (373)
T ss_dssp EEEEEECCSSSEEEEEEEEETTT--EEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred cCcEeeeCCCeEEEEEEEECCCC--cEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence 35789999999999999764321 1257999999875555556889999999999999999999999765 45789999
Q ss_pred ecccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc----------
Q 007935 425 DFIRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 425 Ey~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
||+++|+|.++++. . -|+++++.|+.+..+..++..|||...
T Consensus 171 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~ 250 (373)
T 3c1x_A 171 PYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV 250 (373)
T ss_dssp ECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC--------------
T ss_pred ECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeeccccccccccccccc
Confidence 99999999877642 2 367888888888777788888876432
Q ss_pred -----ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCC-CCccccChh
Q 007935 467 -----SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERR-PLSEVIDPA 539 (584)
Q Consensus 467 -----~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~d~~ 539 (584)
..+|..|+|||++.. ..++.++|||||||++|||+| |.+||...... ...... ..... ..+..+++
T Consensus 251 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~--~~~~~~---~~~~~~~~p~~~~~- 323 (373)
T 3c1x_A 251 HNKTGAKLPVKWMALESLQT-QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYL---LQGRRLLQPEYCPD- 323 (373)
T ss_dssp -------CCGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS--CHHHHH---HTTCCCCCCTTCCH-
T ss_pred cccCCCCCcccccChHHhcC-CCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH--HHHHHH---HcCCCCCCCCCCCH-
Confidence 245678999999654 689999999999999999999 67777653322 222222 12211 11222222
Q ss_pred hhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 540 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 324 ------------~l~~li~~cl~~dp~~RPs~~ell~~L~~i~ 354 (373)
T 3c1x_A 324 ------------PLYEVMLKCWHPKAEMRPSFSELVSRISAIF 354 (373)
T ss_dssp ------------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ------------HHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 3456788899999999999999999999875
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.2e-30 Score=270.73 Aligned_cols=207 Identities=18% Similarity=0.254 Sum_probs=163.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|+...++ +.||||++.... .....+.+.+|+++++.++|||||++++++.+.+..++||
T Consensus 21 ~~~LG~G~fg~V~~a~~~~~g-----~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 21 GDTLGVGTFGKVKVGKHELTG-----HKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp EEEEECCSSSCEEEEEETTTC-----CEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred EEEEeeCCCeEEEEEEECCCC-----CEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 467999999999999988665 899999997542 2223467999999999999999999999999999999999
Q ss_pred ecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCcc----------cc
Q 007935 425 DFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR----------IS 467 (584)
Q Consensus 425 Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~----------~~ 467 (584)
||+++|+|.+++. .. .|++++++|+.+..++.++..|+|.. ..
T Consensus 96 E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~ 175 (476)
T 2y94_A 96 EYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS 175 (476)
T ss_dssp ECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCBCCC
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhcccccccccc
Confidence 9999999976653 33 36788888888887888888887643 24
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHH
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAK 547 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 547 (584)
.||+.|+|||++.....++.++||||+||++|||++|+.||.+. ................+..+++.+
T Consensus 176 ~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~-----~~~~~~~~i~~~~~~~p~~~s~~~------- 243 (476)
T 2y94_A 176 CGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDD-----HVPTLFKKICDGIFYTPQYLNPSV------- 243 (476)
T ss_dssp CSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCS-----SSHHHHHHHHTTCCCCCTTCCHHH-------
T ss_pred CCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCC-----CHHHHHHHHhcCCcCCCccCCHHH-------
Confidence 68999999999655333478999999999999999999999742 233444444444433344444444
Q ss_pred HHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 548 RQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 548 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+++.+||+.||++|||+.|+++
T Consensus 244 ------~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 244 ------ISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp ------HHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ------HHHHHHHcCCCchhCcCHHHHHh
Confidence 44677799999999999999985
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-29 Score=255.90 Aligned_cols=220 Identities=23% Similarity=0.273 Sum_probs=162.2
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc--CCCceeeeeEEEEeC----Cc
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV--QHPNIVRLKAFYYAN----DE 419 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l--~HpnIV~l~g~~~~~----~~ 419 (584)
..+.||+|+||.||+|+.. + +.||||++..... ..+.+|.+++... +|||||++++++.+. +.
T Consensus 41 ~~~~lg~G~~g~V~~~~~~-~------~~vavK~~~~~~~----~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 109 (337)
T 3mdy_A 41 MVKQIGKGRYGEVWMGKWR-G------EKVAVKVFFTTEE----ASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQ 109 (337)
T ss_dssp EEEEEEEETTEEEEEEEET-T------EEEEEEEEEGGGH----HHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCE
T ss_pred EEeEeecCCCeEEEEEEEC-C------ceEEEEEEecccc----chhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCc
Confidence 3578999999999999886 3 7999999965321 4556677766655 999999999999987 67
Q ss_pred eeEeeecccCCcHHHHH------------------------hcc----------cccccCCCCccccccCeEEecCCCcc
Q 007935 420 KLLISDFIRNGSLYAAL------------------------HGF----------GLNRLLPGTSKVTKNETIVTSGTGSR 465 (584)
Q Consensus 420 ~~lV~Ey~~~GsL~~~L------------------------~~~----------g~~~~~~~~~~i~~~~~~~~~~~~~~ 465 (584)
.++||||+++|+|.+++ |.. -|+++++.|+.+..+..++..|||..
T Consensus 110 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a 189 (337)
T 3mdy_A 110 LYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 189 (337)
T ss_dssp EEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred eEEEEeccCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCc
Confidence 89999999999996554 432 46778888888877788888888743
Q ss_pred ---------------cccCCCcccCccccccCCCCCCc------cchhhHHHHHHHHHhC----------CCCCCCCCCC
Q 007935 466 ---------------ISAISNVYLAPEARIYGSKFTQK------CDVYSFGIVLLEILTG----------RLPDAGPEND 514 (584)
Q Consensus 466 ---------------~~~gt~~y~aPE~~~~~~~~~~k------sDV~SfGvvl~ElltG----------~~p~~~~~~~ 514 (584)
...||..|+|||++.. ..++.+ +|||||||++|||+|| +.||......
T Consensus 190 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~ 268 (337)
T 3mdy_A 190 VKFISDTNEVDIPPNTRVGTKRYMPPEVLDE-SLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPS 268 (337)
T ss_dssp EECC---------CCSSCSCGGGCCHHHHTT-CCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred eeeccccccccCCCCCCccCcceeChhhccc-ccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCC
Confidence 2368999999998554 444444 9999999999999999 6777654443
Q ss_pred CCcHHHHHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 515 GKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 515 ~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
......+........ ......... ........+.+++.+||+.||++|||+.||++.|+++.+
T Consensus 269 ~~~~~~~~~~~~~~~--~~~~~~~~~----~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~ 331 (337)
T 3mdy_A 269 DPSYEDMREIVCIKK--LRPSFPNRW----SSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSE 331 (337)
T ss_dssp SCCHHHHHHHHTTSC--CCCCCCGGG----GGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCchhhhHHHHhhhc--cCccccccc----hhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHh
Confidence 333333333222211 111122111 122455678889999999999999999999999999864
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.5e-30 Score=255.94 Aligned_cols=215 Identities=20% Similarity=0.274 Sum_probs=160.1
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC--CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG--DATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|....++ +.||||+++.. ......+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 37 ~~~lg~G~~g~Vy~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 111 (310)
T 2wqm_A 37 EKKIGRGQFSEVYRAACLLDG-----VPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 111 (310)
T ss_dssp EEEEECC--CEEEEEEETTTC-----CEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred EEeecCCCCceEEEEEEcCCC-----ceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence 468999999999999987655 89999999753 23334578999999999999999999999999999999999
Q ss_pred ecccCCcHHHHHhc-----------------------------c--cccccCCCCccccccCeEEecCCCcc--------
Q 007935 425 DFIRNGSLYAALHG-----------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSR-------- 465 (584)
Q Consensus 425 Ey~~~GsL~~~L~~-----------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~-------- 465 (584)
||+++|+|.+++.. . -|.++.+.|+.+..++.++..+++..
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 191 (310)
T 2wqm_A 112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 191 (310)
T ss_dssp ECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC-----------
T ss_pred ecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCc
Confidence 99999999777642 2 35677777877777777777777642
Q ss_pred ---cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC-C-ccccChhh
Q 007935 466 ---ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP-L-SEVIDPAL 540 (584)
Q Consensus 466 ---~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~-~-~~~~d~~~ 540 (584)
...||..|+|||++.. ..++.++||||||+++|||++|+.||.+... ....+.........+ . ...+++
T Consensus 192 ~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-- 265 (310)
T 2wqm_A 192 AAHSLVGTPYYMSPERIHE-NGYNFKSDIWSLGCLLYEMAALQSPFYGDKM---NLYSLCKKIEQCDYPPLPSDHYSE-- 265 (310)
T ss_dssp -------CCSSCCHHHHTT-CCCCHHHHHHHHHHHHHHHHHSSCTTC---C---CHHHHHHHHHTTCSCCCCTTTSCH--
T ss_pred cccccCCCeeEeChHHhCC-CCCCchhhHHHHHHHHHHHHhCCCCCcccch---hHHHHHHHhhcccCCCCcccccCH--
Confidence 2357889999998554 6789999999999999999999999975322 233333333222211 1 112222
Q ss_pred hhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 541 VKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 541 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
.+.+++.+||+.||++|||+.||++.|+++++
T Consensus 266 -----------~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~ 297 (310)
T 2wqm_A 266 -----------ELRQLVNMCINPDPEKRPDVTYVYDVAKRMHA 297 (310)
T ss_dssp -----------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -----------HHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 34567888999999999999999999999865
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-29 Score=250.01 Aligned_cols=215 Identities=24% Similarity=0.359 Sum_probs=163.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|+...... ....||||.+.........+.|.+|+.++++++||||+++++++.+ +..++||||
T Consensus 17 ~~~lg~G~~g~Vy~~~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~ 93 (281)
T 3cc6_A 17 NRILGEGFFGEVYEGVYTNHKG--EKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMEL 93 (281)
T ss_dssp EEEEEECSSSEEEEEEEECTTC--CEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred EEEEEecCCeeEEEeEEcCCCC--CcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEEEEec
Confidence 4689999999999998765421 2267999999876444456889999999999999999999999754 567999999
Q ss_pred ccCCcHHHHHh--------------------------cc--cccccCCCCccccccCeEEecCCCccc------------
Q 007935 427 IRNGSLYAALH--------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI------------ 466 (584)
Q Consensus 427 ~~~GsL~~~L~--------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~------------ 466 (584)
+++|+|.++++ .. -|+++.+.|+.+..++.++..+++...
T Consensus 94 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 173 (281)
T 3cc6_A 94 YPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV 173 (281)
T ss_dssp CTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC---------C
T ss_pred CCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCccccccccccccc
Confidence 99999976664 22 367788888888878888888877432
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhh
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIH 545 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~ 545 (584)
..+|..|+|||++.. ..++.++||||||+++|||+| |+.||..... ......+... ...+.+..+++.
T Consensus 174 ~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~llt~g~~p~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~------ 242 (281)
T 3cc6_A 174 TRLPIKWMSPESINF-RRFTTASDVWMFAVCMWEILSFGKQPFFWLEN--KDVIGVLEKG--DRLPKPDLCPPV------ 242 (281)
T ss_dssp CCCCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCG--GGHHHHHHHT--CCCCCCTTCCHH------
T ss_pred CCCCcceeCchhhcc-CCCCchhccHHHHHHHHHHHhCCCCCcccCCh--HHHHHHHhcC--CCCCCCCCCCHH------
Confidence 245678999998544 688999999999999999999 9999975322 2222222221 122223333333
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 546 AKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 243 -------l~~li~~~l~~~p~~Rps~~ell~~L~~~~ 272 (281)
T 3cc6_A 243 -------LYTLMTRCWDYDPSDRPRFTELVCSLSDVY 272 (281)
T ss_dssp -------HHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -------HHHHHHHHccCCchhCcCHHHHHHHHHHHH
Confidence 445777799999999999999999999874
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-29 Score=257.66 Aligned_cols=212 Identities=18% Similarity=0.296 Sum_probs=159.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC----cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeE
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD----ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLL 422 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~----~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~l 422 (584)
.+.||+|+||.||+|.....+ ..||+|++.... .....+.+.+|++++++++|||||++++++.+.+..++
T Consensus 31 ~~~lG~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 105 (345)
T 3hko_A 31 KGAIGQGSYGVVRVAIENQTR-----AIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICL 105 (345)
T ss_dssp EEEEEECSSCEEEEEEETTTC-----CEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cceeeecCCeEEEEEEECCCC-----ceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEE
Confidence 578999999999999987765 799999986531 23345789999999999999999999999999999999
Q ss_pred eeecccCCcHHHHHh-----------------------------------------------------------------
Q 007935 423 ISDFIRNGSLYAALH----------------------------------------------------------------- 437 (584)
Q Consensus 423 V~Ey~~~GsL~~~L~----------------------------------------------------------------- 437 (584)
||||+++|+|.+++.
T Consensus 106 v~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH 185 (345)
T 3hko_A 106 VMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH 185 (345)
T ss_dssp EEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH
Confidence 999999999977663
Q ss_pred cc--cccccCCCCccccccC--eEEecCCCcc---------------cccCCCcccCcccccc-CCCCCCccchhhHHHH
Q 007935 438 GF--GLNRLLPGTSKVTKNE--TIVTSGTGSR---------------ISAISNVYLAPEARIY-GSKFTQKCDVYSFGIV 497 (584)
Q Consensus 438 ~~--g~~~~~~~~~~i~~~~--~~~~~~~~~~---------------~~~gt~~y~aPE~~~~-~~~~~~ksDV~SfGvv 497 (584)
+. -|+++++.|+.+..++ .++..|+|.. ...||+.|+|||++.. +..++.++|||||||+
T Consensus 186 ~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~i 265 (345)
T 3hko_A 186 NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVL 265 (345)
T ss_dssp HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHH
T ss_pred HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHH
Confidence 22 3577777887776554 6777777633 2358999999998643 2578999999999999
Q ss_pred HHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCcc----ccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHH
Q 007935 498 LLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSE----VIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRT 573 (584)
Q Consensus 498 l~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~----~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~e 573 (584)
+|||++|+.||.+.. ................. .+++ .+.+++.+||+.||++|||+.|
T Consensus 266 l~el~~g~~pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~li~~~l~~~p~~Rps~~~ 327 (345)
T 3hko_A 266 LHLLLMGAVPFPGVN-----DADTISQVLNKKLCFENPNYNVLSP-------------LARDLLSNLLNRNVDERFDAMR 327 (345)
T ss_dssp HHHHHHSSCSSCCSS-----HHHHHHHHHHCCCCTTSGGGGGSCH-------------HHHHHHHHHSCSCTTTSCCHHH
T ss_pred HHHHHHCCCCCCCCC-----hHHHHHHHHhcccccCCcccccCCH-------------HHHHHHHHHcCCChhHCCCHHH
Confidence 999999999997422 22333333333222111 1222 3456778899999999999999
Q ss_pred HHH--HHHhh
Q 007935 574 VSE--SLDRV 581 (584)
Q Consensus 574 v~~--~L~~i 581 (584)
+++ .++++
T Consensus 328 ~l~hp~~~~~ 337 (345)
T 3hko_A 328 ALQHPWISQF 337 (345)
T ss_dssp HHHSHHHHTT
T ss_pred HhcChhhccC
Confidence 986 34444
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=99.96 E-value=3.7e-30 Score=259.26 Aligned_cols=211 Identities=19% Similarity=0.312 Sum_probs=144.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcC-CCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-HPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~-HpnIV~l~g~~~~~~~~~lV~E 425 (584)
++.||+|+||.||+|....++ +.||||++... ..+.+.+|+.++.+++ |||||++++++.+++..++|||
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~-----~~vavK~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 86 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSN-----QAFAVKIISKR----MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVME 86 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTC-----CEEEEEEEEGG----GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred CCccccCCCeEEEEEEECCCC-----CEEEEEEEChh----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEE
Confidence 467999999999999998765 89999999753 2267889999999996 9999999999999999999999
Q ss_pred cccCCcHHHHHh-------------------------cc--cccccCCCCccccccC---eEEecCCCccc---------
Q 007935 426 FIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNE---TIVTSGTGSRI--------- 466 (584)
Q Consensus 426 y~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~---~~~~~~~~~~~--------- 466 (584)
|+++|+|.++++ +. -|+++++.|+.+..++ .++..|+|...
T Consensus 87 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~ 166 (325)
T 3kn6_A 87 LLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPL 166 (325)
T ss_dssp CCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-----
T ss_pred ccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcc
Confidence 999999976654 33 3677888887776544 56777776432
Q ss_pred --ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCC--CCcHHHHHHHHhhcCCCCccccChhhhh
Q 007935 467 --SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEND--GKGLESLVRKAFRERRPLSEVIDPALVK 542 (584)
Q Consensus 467 --~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~d~~~~~ 542 (584)
..||+.|+|||++. +..++.++|||||||++|||++|+.||...... .....+...........+.. ....
T Consensus 167 ~~~~~t~~y~aPE~~~-~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~~ 241 (325)
T 3kn6_A 167 KTPCFTLHYAAPELLN-QNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEG----EAWK 241 (325)
T ss_dssp ------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCS----HHHH
T ss_pred cccCCCcCccCHHHhc-CCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCc----cccc
Confidence 35789999999954 468999999999999999999999999864332 12334444444333322111 1111
Q ss_pred hhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 543 EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 543 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
. ....+.+++.+||+.||++|||+.|+++
T Consensus 242 ~-----~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 242 N-----VSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp T-----SCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred C-----CCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 1 1124566888899999999999999863
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.6e-30 Score=256.24 Aligned_cols=222 Identities=16% Similarity=0.213 Sum_probs=152.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|....++ +.||||+++........+.+.+|++++++++|||||++++++.+++..++||||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 84 (317)
T 2pmi_A 10 LEKLGNGTYATVYKGLNKTTG-----VYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEF 84 (317)
T ss_dssp ---------CEEEEEECSSSC-----CEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEEC
T ss_pred eeEECCCCCEEEEEEEECCCC-----cEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEe
Confidence 356999999999999987765 899999998654444447899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHh-------------------------------cc--cccccCCCCccccccCeEEecCCCccc-------
Q 007935 427 IRNGSLYAALH-------------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI------- 466 (584)
Q Consensus 427 ~~~GsL~~~L~-------------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~------- 466 (584)
++ |+|.+++. +. .|++++++|+.+..++.++..++|...
T Consensus 85 ~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 163 (317)
T 2pmi_A 85 MD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVN 163 (317)
T ss_dssp CC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCCC
T ss_pred cC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecCCCcc
Confidence 98 58866553 22 357788888888777888888877432
Q ss_pred ----ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcC-CCCcc------c
Q 007935 467 ----SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER-RPLSE------V 535 (584)
Q Consensus 467 ----~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~------~ 535 (584)
..||+.|+|||++.....++.++|||||||++|||+||+.||.+.... .....+....... ..... .
T Consensus 164 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~ 241 (317)
T 2pmi_A 164 TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDE--EQLKLIFDIMGTPNESLWPSVTKLPK 241 (317)
T ss_dssp CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCSCCTTTCGGGGGCTT
T ss_pred cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHhCCCChhHhhhhhhhhh
Confidence 367899999998655456899999999999999999999999753211 1111111111100 00000 0
Q ss_pred cC--------hhhhhhhh---HHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 536 ID--------PALVKEIH---AKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 536 ~d--------~~~~~~~~---~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+. ..+..... .......+.+++.+||+.||++|||+.|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 242 YNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp CCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 00 00000000 0011235678999999999999999999975
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-29 Score=254.00 Aligned_cols=209 Identities=19% Similarity=0.262 Sum_probs=155.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC---cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD---ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLI 423 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~---~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV 423 (584)
.+.||+|+||.||+++...+. ...+.||+|+++... .....+.+.+|++++++++|||||++++++.+.+..++|
T Consensus 22 ~~~lG~G~~g~V~~~~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 99 (327)
T 3a62_A 22 LRVLGKGGYGKVFQVRKVTGA--NTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLI 99 (327)
T ss_dssp EEEEEEETTEEEEEEEECSST--TTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred EEEEEeCCCEEEEEEEEeccC--CCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEEEE
Confidence 468999999999999985211 111799999998652 122346688999999999999999999999999999999
Q ss_pred eecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCcc-----------
Q 007935 424 SDFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR----------- 465 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~----------- 465 (584)
|||+++|+|.+++. .. -|+++++.|+.+..++.++..++|..
T Consensus 100 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 179 (327)
T 3a62_A 100 LEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTH 179 (327)
T ss_dssp EECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC----------C
T ss_pred EeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCcccccccCCcccc
Confidence 99999999976653 33 46888899988888888888888743
Q ss_pred cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhh
Q 007935 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIH 545 (584)
Q Consensus 466 ~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~ 545 (584)
...||+.|+|||++.. ..++.++|||||||++|||++|+.||... ...............++..+++.+
T Consensus 180 ~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~-----~~~~~~~~i~~~~~~~p~~~~~~~----- 248 (327)
T 3a62_A 180 TFCGTIEYMAPEILMR-SGHNRAVDWWSLGALMYDMLTGAPPFTGE-----NRKKTIDKILKCKLNLPPYLTQEA----- 248 (327)
T ss_dssp TTSSCCTTSCHHHHTT-SCCCTHHHHHHHHHHHHHHHHSSCSCCCS-----SHHHHHHHHHHTCCCCCTTSCHHH-----
T ss_pred ccCCCcCccCHhhCcC-CCCCCcccchhHHHHHHHHHHCCCCCCCC-----CHHHHHHHHHhCCCCCCCCCCHHH-----
Confidence 2368999999999554 67899999999999999999999999742 233444444444444444444444
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCC-----ChHHHHH
Q 007935 546 AKRQVLATFHIALNCTELDPEFRP-----RMRTVSE 576 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RP-----t~~ev~~ 576 (584)
.+++.+||+.||++|| ++.|+++
T Consensus 249 --------~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 249 --------RDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp --------HHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred --------HHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 4466779999999999 6677764
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=99.96 E-value=8.4e-30 Score=263.58 Aligned_cols=161 Identities=22% Similarity=0.276 Sum_probs=134.1
Q ss_pred ceeceee--cCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEe
Q 007935 347 AYVVGKS--KNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLI 423 (584)
Q Consensus 347 ~~~iG~G--~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV 423 (584)
.+.||+| +||.||+|+....+ +.||||+++... .....+.+.+|++++++++|||||++++++.+++..++|
T Consensus 30 ~~~lG~G~~~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 104 (389)
T 3gni_B 30 LTVIGKGFEDLMTVNLARYKPTG-----EYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVV 104 (389)
T ss_dssp EEEEEEETTTTEEEEEEEETTTC-----CEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred EecccCCcCCceEEEEEEEcCCC-----CEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEE
Confidence 4679999 99999999998765 899999997652 233457788999999999999999999999999999999
Q ss_pred eecccCCcHHHHHh---------------------------cc--cccccCCCCccccccCeEEecCCCcc---------
Q 007935 424 SDFIRNGSLYAALH---------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR--------- 465 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~---------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~--------- 465 (584)
||||++|+|.+++. +. .|++++++|+.+..++.++..+++..
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~ 184 (389)
T 3gni_B 105 TSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQR 184 (389)
T ss_dssp EECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEECEETTEE
T ss_pred EEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccceeecccccc
Confidence 99999999976653 22 36888888888877777777777532
Q ss_pred ---------cccCCCcccCccccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCC
Q 007935 466 ---------ISAISNVYLAPEARIYG-SKFTQKCDVYSFGIVLLEILTGRLPDAGPE 512 (584)
Q Consensus 466 ---------~~~gt~~y~aPE~~~~~-~~~~~ksDV~SfGvvl~ElltG~~p~~~~~ 512 (584)
...||..|+|||++..+ ..++.++|||||||++|||++|+.||.+..
T Consensus 185 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 241 (389)
T 3gni_B 185 QRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMP 241 (389)
T ss_dssp CSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred ccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC
Confidence 13688889999996542 478999999999999999999999997643
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=99.96 E-value=8.7e-30 Score=252.73 Aligned_cols=221 Identities=16% Similarity=0.208 Sum_probs=157.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||+||+|+...++ +.||||+++... .....+.+.+|++++++++|||||++++++.+++..++|||
T Consensus 7 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 7 LEKIGEGTYGTVFKAKNRETH-----EIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp EEEEEECSSSEEEEEEETTTC-----CEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEecCCCCeEEEEEEECCCC-----ceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 467999999999999998765 899999997653 23334778999999999999999999999999999999999
Q ss_pred cccCCcH-------------------------HHHHhccc--ccccCCCCccccccCeEEecCCCccc-----------c
Q 007935 426 FIRNGSL-------------------------YAALHGFG--LNRLLPGTSKVTKNETIVTSGTGSRI-----------S 467 (584)
Q Consensus 426 y~~~GsL-------------------------~~~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~-----------~ 467 (584)
|++++.+ .+|||+.| |++++++|+.+..++.++..|+|... .
T Consensus 82 ~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 161 (292)
T 3o0g_A 82 FCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAE 161 (292)
T ss_dssp CCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCCCSC
T ss_pred cCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCccccccCC
Confidence 9986432 23445444 67888888888888888888876432 3
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhh-----
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVK----- 542 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~----- 542 (584)
.||..|+|||++.....++.++|||||||++|||+||..||.... .....................+....
T Consensus 162 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 237 (292)
T 3o0g_A 162 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN----DVDDQLKRIFRLLGTPTEEQWPSMTKLPDYK 237 (292)
T ss_dssp CSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCS----SHHHHHHHHHHHHCCCCTTTCTTGGGSTTCC
T ss_pred ccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCC----CHHHHHHHHHHHhCCCChhhhhhhccccccc
Confidence 578899999996654458999999999999999999988865322 22222222211100000000000000
Q ss_pred ----------hh-hHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 543 ----------EI-HAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 543 ----------~~-~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.. ........+.+++.+||+.||++|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 238 PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 00 00011234567888999999999999999985
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-29 Score=254.49 Aligned_cols=217 Identities=21% Similarity=0.323 Sum_probs=165.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|.....+... ...||+|.+.........+.|.+|+.++++++|||||+++++|.+. ..++|+||
T Consensus 20 ~~~lG~G~~g~Vy~~~~~~~~~~~-~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-~~~~v~~~ 97 (327)
T 3lzb_A 20 IKVLGSGAFGTVYKGLWIPEGEKV-KIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQL 97 (327)
T ss_dssp EEEEEECSSEEEEEEEECCTTCSC-CEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESS-SEEEEECC
T ss_pred EEEeeeCCCeEEEEEEEcCCCceE-EEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecC-CceEEEEe
Confidence 468999999999999987664322 2568999987665555568899999999999999999999999875 48899999
Q ss_pred ccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc------------
Q 007935 427 IRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI------------ 466 (584)
Q Consensus 427 ~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~------------ 466 (584)
+++|+|.++++. . -|+++++.|+.+..++.++..|||...
T Consensus 98 ~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~~~~~ 177 (327)
T 3lzb_A 98 MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177 (327)
T ss_dssp CSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC--------------
T ss_pred cCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCcccccccc
Confidence 999999776642 2 467888888888888888888887542
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEI 544 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~ 544 (584)
..+|..|+|||++.. ..++.++|||||||++|||+| |+.||...... .+...+... ...+.+..+++
T Consensus 178 ~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~~~~~~~~--~~~~~~~~~~~------ 246 (327)
T 3lzb_A 178 GGKVPIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILEKG--ERLPQPPICTI------ 246 (327)
T ss_dssp --CCCGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHHHTT--CCCCCCTTBCH------
T ss_pred CCCccccccCHHHHcC-CCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH--HHHHHHHcC--CCCCCCccCCH------
Confidence 245678999999654 689999999999999999999 99999753322 222222211 11122233333
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
.+.+++.+||+.||.+|||+.|+++.|+++..
T Consensus 247 -------~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 278 (327)
T 3lzb_A 247 -------DVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp -------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred -------HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 34557778999999999999999999998753
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5.7e-30 Score=269.55 Aligned_cols=206 Identities=20% Similarity=0.261 Sum_probs=156.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC--CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG--DATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|+...++ +.||||+++.. ......+.+.+|+.++++++|||||+++++|.+.+..++||
T Consensus 153 ~~~lG~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 227 (446)
T 4ejn_A 153 LKLLGKGTFGKVILVKEKATG-----RYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVM 227 (446)
T ss_dssp EEEEEEETTEEEEEEEETTTC-----CEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEE
T ss_pred eEEEeeCcCEEEEEEEEcCCC-----CEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEE
Confidence 578999999999999987765 89999999754 22333467889999999999999999999999999999999
Q ss_pred ecccCCcHHH-------------------------HHhc-c--cccccCCCCccccccCeEEecCCCcc-----------
Q 007935 425 DFIRNGSLYA-------------------------ALHG-F--GLNRLLPGTSKVTKNETIVTSGTGSR----------- 465 (584)
Q Consensus 425 Ey~~~GsL~~-------------------------~L~~-~--g~~~~~~~~~~i~~~~~~~~~~~~~~----------- 465 (584)
|||++|+|.+ |||. . -|+++++.|+.+..++.++..|||..
T Consensus 228 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 307 (446)
T 4ejn_A 228 EYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMK 307 (446)
T ss_dssp CCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-----C
T ss_pred eeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCCCcccc
Confidence 9999999954 4554 3 46888888988888888888888743
Q ss_pred cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhh
Q 007935 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIH 545 (584)
Q Consensus 466 ~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~ 545 (584)
...||+.|+|||++. +..++.++|||||||++|||++|+.||... ...............++..+++.+
T Consensus 308 ~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g~~Pf~~~-----~~~~~~~~i~~~~~~~p~~~~~~~----- 376 (446)
T 4ejn_A 308 TFCGTPEYLAPEVLE-DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ-----DHEKLFELILMEEIRFPRTLGPEA----- 376 (446)
T ss_dssp CSSSCGGGCCHHHHH-TSCCCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHCCCCCCTTSCHHH-----
T ss_pred cccCCccccCHhhcC-CCCCCCccchhhhHHHHHHHhhCCCCCCCC-----CHHHHHHHHHhCCCCCCccCCHHH-----
Confidence 236899999999954 468999999999999999999999999742 334444444445444455555544
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCC-----ChHHHHH
Q 007935 546 AKRQVLATFHIALNCTELDPEFRP-----RMRTVSE 576 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RP-----t~~ev~~ 576 (584)
.+++.+||+.||++|| |+.|+++
T Consensus 377 --------~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 377 --------KSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp --------HHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred --------HHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 3466669999999999 9999875
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.7e-29 Score=248.31 Aligned_cols=205 Identities=22% Similarity=0.326 Sum_probs=156.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||++....++ ..||+|++.........+.+.+|++++++++|||||++++++.+.+..++||||
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 27 KRKLGSGAFGDVHLVEERSSG-----LERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp EEEEEECSSCEEEEEEETTTC-----CEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred cceeccCCCeEEEEEEEccCC-----ceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 568999999999999987765 899999998764444458899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHh-----------------------------cc--cccccCCCCccccc---cCeEEecCCCcc-------
Q 007935 427 IRNGSLYAALH-----------------------------GF--GLNRLLPGTSKVTK---NETIVTSGTGSR------- 465 (584)
Q Consensus 427 ~~~GsL~~~L~-----------------------------~~--g~~~~~~~~~~i~~---~~~~~~~~~~~~------- 465 (584)
+++|+|.+++. +. -|+++.+.|+.+.. +..++..++|..
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE 181 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-----
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc
Confidence 99999976653 22 35677777777632 355677777643
Q ss_pred ---cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCcc---ccChh
Q 007935 466 ---ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSE---VIDPA 539 (584)
Q Consensus 466 ---~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~---~~d~~ 539 (584)
...||..|+|||++ . ..++.++|||||||++|||++|+.||.+. .................. .+++
T Consensus 182 ~~~~~~~t~~y~aPE~~-~-~~~~~~~Di~slG~il~~ll~g~~pf~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~- 253 (285)
T 3is5_A 182 HSTNAAGTALYMAPEVF-K-RDVTFKCDIWSAGVVMYFLLTGCLPFTGT-----SLEEVQQKATYKEPNYAVECRPLTP- 253 (285)
T ss_dssp -----CTTGGGCCHHHH-T-TCCCHHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHCCCCCCC--CCCCH-
T ss_pred cCcCcccccCcCChHHh-c-cCCCcccCeehHHHHHHHHHhCCCCCCCC-----CHHHHHhhhccCCcccccccCcCCH-
Confidence 23688999999984 3 46899999999999999999999999742 233333333222221111 1222
Q ss_pred hhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 540 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||+.||++|||+.|+++
T Consensus 254 ------------~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 254 ------------QAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp ------------HHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred ------------HHHHHHHHHccCChhhCcCHHHHhc
Confidence 3456778899999999999999985
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=7.3e-30 Score=264.43 Aligned_cols=231 Identities=17% Similarity=0.186 Sum_probs=166.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCC--ceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAND--EKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~--~~~lV~ 424 (584)
.++||+|+||.||+|+....+ +.||||+++........+.+.+|++++++++|||||++++++.+.+ ..++||
T Consensus 14 ~~~LG~G~~g~Vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 14 SDILGQGATANVFRGRHKKTG-----DLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEECSSEEEEEEEETTTC-----CEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred EEEEEcCCCeEEEEEEECCCC-----cEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 467999999999999998765 8999999986544444578899999999999999999999998765 679999
Q ss_pred ecccCCcHHHHHhc----------------------------c--cccccCCCCccc----cccCeEEecCCCcc-----
Q 007935 425 DFIRNGSLYAALHG----------------------------F--GLNRLLPGTSKV----TKNETIVTSGTGSR----- 465 (584)
Q Consensus 425 Ey~~~GsL~~~L~~----------------------------~--g~~~~~~~~~~i----~~~~~~~~~~~~~~----- 465 (584)
||+++|+|.++++. . .|++++++|+.+ ..+..++..|||..
T Consensus 89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~ 168 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168 (396)
T ss_dssp CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCC
T ss_pred ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccC
Confidence 99999999766643 2 357778888766 33345667777643
Q ss_pred -----cccCCCcccCcccccc-------CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC-C
Q 007935 466 -----ISAISNVYLAPEARIY-------GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP-L 532 (584)
Q Consensus 466 -----~~~gt~~y~aPE~~~~-------~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~-~ 532 (584)
...||..|+|||++.. +..++.++|||||||++|||+||+.||......... ...+.......++ .
T Consensus 169 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~-~~~~~~~~~~~p~~~ 247 (396)
T 4eut_A 169 DEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN-KEVMYKIITGKPSGA 247 (396)
T ss_dssp GGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTC-HHHHHHHHHSCCTTC
T ss_pred CCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccch-HHHHHHHhcCCCccc
Confidence 2368999999998543 146788999999999999999999999754433222 3333333332211 0
Q ss_pred cccc----------Chhhhh-hhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 533 SEVI----------DPALVK-EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 533 ~~~~----------d~~~~~-~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
...+ +..+.. ..........+.+++.+||+.||++|||+.|+++.++++-.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~ 309 (396)
T 4eut_A 248 ISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (396)
T ss_dssp CEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHT
T ss_pred chhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhh
Confidence 0000 000000 00012334466789999999999999999999999988743
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-29 Score=249.88 Aligned_cols=206 Identities=21% Similarity=0.322 Sum_probs=161.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|....++ ..||||++.... .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 88 (279)
T 3fdn_A 14 GRPLGKGKFGNVYLAREKQSK-----FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL 88 (279)
T ss_dssp EEEEEECSSEEEEEEEETTTC-----CEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eeEEecCCCeEEEEEEEccCC-----cEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEE
Confidence 467999999999999988775 799999986542 1222467899999999999999999999999999999999
Q ss_pred ecccCCcHHHHH-------------------------hccc--ccccCCCCccccccCeEEecCCCcc---------ccc
Q 007935 425 DFIRNGSLYAAL-------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSR---------ISA 468 (584)
Q Consensus 425 Ey~~~GsL~~~L-------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~---------~~~ 468 (584)
||+++|+|.+++ |+.| |+++.+.|+.+..++.++..|+|.. ...
T Consensus 89 e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~ 168 (279)
T 3fdn_A 89 EYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC 168 (279)
T ss_dssp CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC--------C
T ss_pred ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCCcccccccC
Confidence 999999996555 3333 6777888888877888888887632 236
Q ss_pred CCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHH
Q 007935 469 ISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKR 548 (584)
Q Consensus 469 gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 548 (584)
||..|+|||++. +..++.++||||||+++|||++|+.||.. .................+..+++.+
T Consensus 169 ~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-------- 234 (279)
T 3fdn_A 169 GTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEA-----NTYQETYKRISRVEFTFPDFVTEGA-------- 234 (279)
T ss_dssp CCCTTCCHHHHT-TCCCCTTHHHHHHHHHHHHHHHSSCTTCC-----SSHHHHHHHHHHTCCCCCTTSCHHH--------
T ss_pred CCCCccCHhHhc-cCCCCccchhHhHHHHHHHHHHCCCCCCC-----CcHHHHHHHHHhCCCCCCCcCCHHH--------
Confidence 899999999854 46889999999999999999999999974 2333344444444434444444444
Q ss_pred HHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 549 QVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 549 ~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+++.+||+.||++|||+.|+++
T Consensus 235 -----~~li~~~l~~~p~~Rps~~e~l~ 257 (279)
T 3fdn_A 235 -----RDLISRLLKHNPSQRPMLREVLE 257 (279)
T ss_dssp -----HHHHHHHCCSSGGGSCCHHHHHH
T ss_pred -----HHHHHHHhccChhhCCCHHHHhh
Confidence 34677799999999999999985
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-29 Score=251.80 Aligned_cols=219 Identities=21% Similarity=0.306 Sum_probs=163.5
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCce-eEee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK-LLIS 424 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~-~lV~ 424 (584)
..++||+|+||.||+|.....+. ....||+|.+.........+.|.+|+.++++++|||||++++++.+.+.. ++||
T Consensus 25 ~~~~lg~G~~g~Vy~~~~~~~~~--~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~ 102 (298)
T 3pls_A 25 SDRVIGKGHFGVVYHGEYIDQAQ--NRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL 102 (298)
T ss_dssp EEEEEEEETTEEEEEEEEECSSS--CEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred cCceeccCCCceEEEEEEecCCC--ceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEE
Confidence 45789999999999999765431 12579999998765555568899999999999999999999999876665 9999
Q ss_pred ecccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc----------
Q 007935 425 DFIRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 425 Ey~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
||+.+|+|.++++. . -|+++++.|+.+..+..++..++|...
T Consensus 103 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 182 (298)
T 3pls_A 103 PYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSV 182 (298)
T ss_dssp CCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGCS
T ss_pred ecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCccccc
Confidence 99999999777643 2 367788888888777788888876432
Q ss_pred -----ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhh
Q 007935 467 -----SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALV 541 (584)
Q Consensus 467 -----~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~ 541 (584)
..+|..|+|||.+. +..++.++|||||||++|||+||..|+..... ...+........ ..+.+..+++
T Consensus 183 ~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~--- 255 (298)
T 3pls_A 183 QQHRHARLPVKWTALESLQ-TYRFTTKSDVWSFGVLLWELLTRGAPPYRHID-PFDLTHFLAQGR--RLPQPEYCPD--- 255 (298)
T ss_dssp CCSSCTTCGGGGSCHHHHT-TCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC-GGGHHHHHHTTC--CCCCCTTCCH---
T ss_pred ccCcCCCCCccccChhhhc-cCCCChhhchhhHHHHHHHHhhCCCCCCccCC-HHHHHHHhhcCC--CCCCCccchH---
Confidence 24677899999954 46889999999999999999996666443211 122222222111 1112222333
Q ss_pred hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 542 KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 542 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
.+.+++.+||+.||.+|||+.|+++.|+++..
T Consensus 256 ----------~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~ 287 (298)
T 3pls_A 256 ----------SLYQVMQQCWEADPAVRPTFRVLVGEVEQIVS 287 (298)
T ss_dssp ----------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----------HHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 34557778999999999999999999998753
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-29 Score=259.91 Aligned_cols=209 Identities=15% Similarity=0.202 Sum_probs=158.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|....++ +.||+|.+..... .....+.+|++++++++|||||++++++.+.+..++||||
T Consensus 56 ~~~LG~G~~g~Vy~~~~~~~~-----~~~a~K~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 56 LEELGSGAFGVVHRCVEKATG-----RVFVAKFINTPYP-LDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp EEEEEEETTEEEEEEEETTTC-----CEEEEEEEECCSH-HHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred EEEEecCCCEEEEEEEECCCC-----CEEEEEEecccch-hhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 467999999999999988765 8999999976432 2336799999999999999999999999999999999999
Q ss_pred ccCCcHHHHHh--------------------------cc--cccccCCCCcccccc--CeEEecCCCccc----------
Q 007935 427 IRNGSLYAALH--------------------------GF--GLNRLLPGTSKVTKN--ETIVTSGTGSRI---------- 466 (584)
Q Consensus 427 ~~~GsL~~~L~--------------------------~~--g~~~~~~~~~~i~~~--~~~~~~~~~~~~---------- 466 (584)
+++|+|.+++. +. .|+++++.|+.+..+ ..++..|+|...
T Consensus 130 ~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~ 209 (387)
T 1kob_A 130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKV 209 (387)
T ss_dssp CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEE
T ss_pred CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCCCcceee
Confidence 99999976653 22 367788888777533 457777776432
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhH
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 546 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 546 (584)
..||+.|+|||++. +..++.++|||||||++|||+||+.||.+. .......................+
T Consensus 210 ~~gt~~y~aPE~~~-~~~~~~~~DiwSlG~il~elltg~~Pf~~~-----~~~~~~~~i~~~~~~~~~~~~~~~------ 277 (387)
T 1kob_A 210 TTATAEFAAPEIVD-REPVGFYTDMWAIGVLGYVLLSGLSPFAGE-----DDLETLQNVKRCDWEFDEDAFSSV------ 277 (387)
T ss_dssp ECSSGGGCCHHHHT-TCCBCHHHHHHHHHHHHHHHHHSCCSSCCS-----SHHHHHHHHHHCCCCCCSSTTTTS------
T ss_pred eccCCCccCchhcc-CCCCCCcccEeeHhHHHHHHHhCCCCCCCC-----CHHHHHHHHHhCCCCCCccccccC------
Confidence 36899999999954 467999999999999999999999999752 222333333332222111111111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 547 KRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 547 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
...+.+++.+||+.||++|||+.|+++
T Consensus 278 ---s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 278 ---SPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp ---CHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred ---CHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 113456888899999999999999985
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-29 Score=276.01 Aligned_cols=213 Identities=20% Similarity=0.227 Sum_probs=161.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|.+.... ..+.||||+++... .....++|.+|+++|++++|||||+++++|. .+..++|||
T Consensus 374 ~~~LG~G~fG~Vy~~~~~~~~---~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E 449 (635)
T 4fl3_A 374 DKELGSGNFGTVKKGYYQMKK---VVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVME 449 (635)
T ss_dssp EEEEEECSSEEEEEEEEECSS---CEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEE
T ss_pred CCEeccCCCEEEEEEEEcCCC---cceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEE
Confidence 357999999999999664321 11789999998652 2333578999999999999999999999986 456899999
Q ss_pred cccCCcHHHHHhc-------------------------c--cccccCCCCccccccCeEEecCCCccc------------
Q 007935 426 FIRNGSLYAALHG-------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI------------ 466 (584)
Q Consensus 426 y~~~GsL~~~L~~-------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~------------ 466 (584)
||++|+|.++++. . .|+|+++.|+.+..+..++..|||...
T Consensus 450 ~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 529 (635)
T 4fl3_A 450 MAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 529 (635)
T ss_dssp CCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--------
T ss_pred ccCCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccc
Confidence 9999999777642 2 468888899888888888888887432
Q ss_pred --ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC-CCCccccChhhhh
Q 007935 467 --SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER-RPLSEVIDPALVK 542 (584)
Q Consensus 467 --~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~d~~~~~ 542 (584)
..+|..|+|||++.. ..++.++|||||||++|||+| |+.||.+.. ............ ...+..+++
T Consensus 530 ~~~~~t~~y~APE~~~~-~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~-----~~~~~~~i~~~~~~~~p~~~~~---- 599 (635)
T 4fl3_A 530 THGKWPVKWYAPECINY-YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK-----GSEVTAMLEKGERMGCPAGCPR---- 599 (635)
T ss_dssp -----CGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC-----HHHHHHHHHTTCCCCCCTTCCH----
T ss_pred cCCCCceeeeChhhhcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHcCCCCCCCCCCCH----
Confidence 235678999999654 689999999999999999999 999997532 222222222221 112222332
Q ss_pred hhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 543 EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 543 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.+.+++..||+.||++|||+.+|++.|+++.
T Consensus 600 ---------~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~ 630 (635)
T 4fl3_A 600 ---------EMYDLMNLCWTYDVENRPGFAAVELRLRNYY 630 (635)
T ss_dssp ---------HHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred ---------HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 4456788899999999999999999999874
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-29 Score=256.35 Aligned_cols=206 Identities=20% Similarity=0.305 Sum_probs=157.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|+...++ +.||||++.... .....++|.+|++++++++|||||++++++.+++..++||
T Consensus 59 ~~~lG~G~~g~Vy~a~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 59 LREIGHGSFGAVYFARDVRNS-----EVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp EEEEEECSSEEEEEEEETTTT-----EEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred eeEEccCCCEEEEEEEEccCC-----eEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 467999999999999986655 899999997642 2233467999999999999999999999999999999999
Q ss_pred ecccCCcHHHHH--------------------------hcc--cccccCCCCccccccCeEEecCCCccc-------ccC
Q 007935 425 DFIRNGSLYAAL--------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSRI-------SAI 469 (584)
Q Consensus 425 Ey~~~GsL~~~L--------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~-------~~g 469 (584)
||++ |+|.+++ |.. .|+++++.|+.+..++.++..++|... ..|
T Consensus 134 e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~g 212 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVG 212 (348)
T ss_dssp ECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCS
T ss_pred ecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCCCcccC
Confidence 9997 5775444 333 467888888888888888888887542 468
Q ss_pred CCcccCccccc--cCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC-C-ccccChhhhhhhh
Q 007935 470 SNVYLAPEARI--YGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP-L-SEVIDPALVKEIH 545 (584)
Q Consensus 470 t~~y~aPE~~~--~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~-~-~~~~d~~~~~~~~ 545 (584)
|+.|+|||++. .+..++.++|||||||++|||+||+.||.... .............+ . ...+++
T Consensus 213 t~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~------- 280 (348)
T 1u5q_A 213 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-----AMSALYHIAQNESPALQSGHWSE------- 280 (348)
T ss_dssp CGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-----HHHHHHHHHHSCCCCCCCTTSCH-------
T ss_pred CcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHhcCCCCCCCCCCCH-------
Confidence 99999999864 24578999999999999999999999997421 22222222222211 1 112222
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 546 AKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||+.||++|||+.|+++
T Consensus 281 ------~l~~li~~~l~~dP~~Rps~~~ll~ 305 (348)
T 1u5q_A 281 ------YFRNFVDSCLQKIPQDRPTSEVLLK 305 (348)
T ss_dssp ------HHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ------HHHHHHHHHcccChhhCcCHHHHhh
Confidence 3445777899999999999999975
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-29 Score=257.35 Aligned_cols=201 Identities=17% Similarity=0.213 Sum_probs=160.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLI 423 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV 423 (584)
.++||+|+||.||+|+...++ +.||||+++... .....+.+.+|..++..+ +||||+++++++.+.+..|+|
T Consensus 25 ~~~lG~G~fg~V~~~~~~~~~-----~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 99 (353)
T 2i0e_A 25 LMVLGKGSFGKVMLSERKGTD-----ELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV 99 (353)
T ss_dssp EEEEEEETTEEEEEEEETTEE-----EEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEE
T ss_pred EEEEeeCCCEEEEEEEECCCC-----CEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEE
Confidence 468999999999999998765 899999997642 223346788999999988 899999999999999999999
Q ss_pred eecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCcc-----------
Q 007935 424 SDFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR----------- 465 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~----------- 465 (584)
|||+++|+|.+++. .. .|++++++|+.+..++.++..++|..
T Consensus 100 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~ 179 (353)
T 2i0e_A 100 MEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTK 179 (353)
T ss_dssp EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBC
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccCCcccc
Confidence 99999999976654 33 46888889988888888888888743
Q ss_pred cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhh
Q 007935 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIH 545 (584)
Q Consensus 466 ~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~ 545 (584)
..+||+.|+|||++. +..++.++|||||||++|||++|+.||.+. ....+..........++..+++.+
T Consensus 180 ~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~G~~Pf~~~-----~~~~~~~~i~~~~~~~p~~~s~~~----- 248 (353)
T 2i0e_A 180 TFCGTPDYIAPEIIA-YQPYGKSVDWWAFGVLLYEMLAGQAPFEGE-----DEDELFQSIMEHNVAYPKSMSKEA----- 248 (353)
T ss_dssp CCCSCGGGCCHHHHT-TCCBSTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHCCCCCCTTSCHHH-----
T ss_pred cccCCccccChhhhc-CCCcCCcccccchHHHHHHHHcCCCCCCCC-----CHHHHHHHHHhCCCCCCCCCCHHH-----
Confidence 236899999999954 468999999999999999999999999742 334455555555544455455444
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCCh
Q 007935 546 AKRQVLATFHIALNCTELDPEFRPRM 571 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RPt~ 571 (584)
.+++.+||+.||++||++
T Consensus 249 --------~~li~~lL~~dP~~R~~~ 266 (353)
T 2i0e_A 249 --------VAICKGLMTKHPGKRLGC 266 (353)
T ss_dssp --------HHHHHHHTCSCTTSCTTC
T ss_pred --------HHHHHHHhhcCHHHcCCC
Confidence 346667999999999964
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-29 Score=248.62 Aligned_cols=210 Identities=20% Similarity=0.268 Sum_probs=158.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|.....+ +.||||.+.........+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 12 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (276)
T 2yex_A 12 VQTLGEGAYGEVQLAVNRVTE-----EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (276)
T ss_dssp EEEEEECSSSEEEEEEETTTC-----CEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred EEEeecCCCcEEEEEEECCCC-----cEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence 467999999999999987655 799999997654444457899999999999999999999999999999999999
Q ss_pred ccCCcHHHH-------------------------Hhccc--ccccCCCCccccccCeEEecCCCccc-------------
Q 007935 427 IRNGSLYAA-------------------------LHGFG--LNRLLPGTSKVTKNETIVTSGTGSRI------------- 466 (584)
Q Consensus 427 ~~~GsL~~~-------------------------L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~------------- 466 (584)
+++|+|.++ ||+.| |.++.+.|+.+..++.++..+++...
T Consensus 87 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 166 (276)
T 2yex_A 87 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166 (276)
T ss_dssp CTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCC
T ss_pred cCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhcccC
Confidence 999998544 44444 57777888877777777777776432
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhH
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 546 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 546 (584)
..||..|+|||++.....++.++||||||+++|||+||+.||............+... .........+++
T Consensus 167 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-------- 236 (276)
T 2yex_A 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK--KTYLNPWKKIDS-------- 236 (276)
T ss_dssp CCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTT--CTTSTTGGGSCH--------
T ss_pred CccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhc--ccccCchhhcCH--------
Confidence 3578899999996553334789999999999999999999998644332222222110 000001112222
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 547 KRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 547 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||+.||++|||+.|+++
T Consensus 237 -----~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 237 -----APLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp -----HHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -----HHHHHHHHHCCCCchhCCCHHHHhc
Confidence 3456778899999999999999975
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-29 Score=255.31 Aligned_cols=218 Identities=22% Similarity=0.307 Sum_probs=165.7
Q ss_pred cceeceeecCceEEEEEecCCC--CCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeE
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGS--GMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLL 422 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~--~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~l 422 (584)
..+.||+|+||.||+|+..... .......||||+++........+.+.+|+++++++ +||||+++++++.+.+..++
T Consensus 39 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 118 (334)
T 2pvf_A 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 118 (334)
T ss_dssp EEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEE
T ss_pred EeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEE
Confidence 4578999999999999975321 11223789999998765555567899999999999 99999999999999999999
Q ss_pred eeecccCCcHHHHHhc-----------------------------------------c--cccccCCCCccccccCeEEe
Q 007935 423 ISDFIRNGSLYAALHG-----------------------------------------F--GLNRLLPGTSKVTKNETIVT 459 (584)
Q Consensus 423 V~Ey~~~GsL~~~L~~-----------------------------------------~--g~~~~~~~~~~i~~~~~~~~ 459 (584)
||||+++|+|.+++.. . .|+++++.|+.+..++.++.
T Consensus 119 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL 198 (334)
T 2pvf_A 119 IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKI 198 (334)
T ss_dssp EEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEE
T ss_pred EEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcCCCCEEE
Confidence 9999999999887743 1 35677778877777777888
Q ss_pred cCCCccc-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHH
Q 007935 460 SGTGSRI-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKA 525 (584)
Q Consensus 460 ~~~~~~~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~ 525 (584)
.++|... ..+|..|+|||++.. ..++.++|||||||++|||+| |+.||.+. ....+....
T Consensus 199 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~-----~~~~~~~~~ 272 (334)
T 2pvf_A 199 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-----PVEELFKLL 272 (334)
T ss_dssp CCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCSSTTC-----CHHHHHHHH
T ss_pred ccccccccccccccccccCCCCcccceeChHHhcC-CCcChHHHHHHHHHHHHHHHhCCCCCcCcC-----CHHHHHHHH
Confidence 8776432 245678999998654 678999999999999999999 99999742 223333332
Q ss_pred hhcC-CCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 526 FRER-RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 526 ~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.... ...+..+++ .+.+++.+||+.||.+|||+.|+++.|+++.
T Consensus 273 ~~~~~~~~~~~~~~-------------~l~~li~~~l~~dp~~Rps~~ell~~L~~l~ 317 (334)
T 2pvf_A 273 KEGHRMDKPANCTN-------------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317 (334)
T ss_dssp HHTCCCCCCTTCCH-------------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hcCCCCCCCccCCH-------------HHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 2222 112222222 3455778899999999999999999999874
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.7e-30 Score=266.34 Aligned_cols=207 Identities=17% Similarity=0.204 Sum_probs=159.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|+...++ +.||+|++++.. .....+.+.+|+.+++.++|||||+++++|.+++..|+||
T Consensus 74 ~~~LG~G~fG~V~~~~~~~~~-----~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 148 (410)
T 3v8s_A 74 VKVIGRGAFGEVQLVRHKSTR-----KVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVM 148 (410)
T ss_dssp EEEEEECSSEEEEEEEETTTC-----CEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred EEEEEcCCCEEEEEEEECCCC-----cEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence 468999999999999998765 899999997531 1222356899999999999999999999999999999999
Q ss_pred ecccCCcHHHHHh------------------------cc--cccccCCCCccccccCeEEecCCCcc------------c
Q 007935 425 DFIRNGSLYAALH------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR------------I 466 (584)
Q Consensus 425 Ey~~~GsL~~~L~------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~------------~ 466 (584)
|||++|+|.++++ .. -|++++++|+.+..++.++..|+|.. .
T Consensus 149 E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~~ 228 (410)
T 3v8s_A 149 EYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT 228 (410)
T ss_dssp CCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEEECCS
T ss_pred eCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEeeccCCcccccC
Confidence 9999999976653 33 36888899988888888888888743 3
Q ss_pred ccCCCcccCccccccCC---CCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhc----CCCCccccChh
Q 007935 467 SAISNVYLAPEARIYGS---KFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE----RRPLSEVIDPA 539 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~---~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~----~~~~~~~~d~~ 539 (584)
.+||+.|||||++.... .++.++|||||||++|||+||+.||.+. ............ ..+....+++.
T Consensus 229 ~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~-----~~~~~~~~i~~~~~~~~~p~~~~~s~~ 303 (410)
T 3v8s_A 229 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD-----SLVGTYSKIMNHKNSLTFPDDNDISKE 303 (410)
T ss_dssp CCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCS-----SHHHHHHHHHTHHHHCCCCTTCCCCHH
T ss_pred CcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCC-----ChhhHHHHHHhccccccCCCcccccHH
Confidence 46999999999965421 2789999999999999999999999742 223333333221 22212234444
Q ss_pred hhhhhhHHHHHHHHHHHHhcccCCCCCC--CCChHHHHH
Q 007935 540 LVKEIHAKRQVLATFHIALNCTELDPEF--RPRMRTVSE 576 (584)
Q Consensus 540 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~--RPt~~ev~~ 576 (584)
+ .+++.+||..+|.+ ||++.||++
T Consensus 304 ~-------------~~li~~lL~~~~~rlgR~~~~ei~~ 329 (410)
T 3v8s_A 304 A-------------KNLICAFLTDREVRLGRNGVEEIKR 329 (410)
T ss_dssp H-------------HHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred H-------------HHHHHHHccChhhhCCCCCHHHHhc
Confidence 4 34666699999988 999999975
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-29 Score=249.81 Aligned_cols=213 Identities=19% Similarity=0.258 Sum_probs=161.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
+..||+|+||.||+|...... ....||||.++........+.+.+|++++++++||||+++++++ +.+..++||||
T Consensus 15 ~~~lg~G~~g~Vy~~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~ 90 (287)
T 1u59_A 15 DIELGCGNFGSVRQGVYRMRK---KQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEM 90 (287)
T ss_dssp EEEEECCTTEEEEEEEEC------CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEEC
T ss_pred hccccccCceeEEEeEeccCC---CcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEe
Confidence 347999999999999865321 11789999998765555568899999999999999999999999 56679999999
Q ss_pred ccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc------------
Q 007935 427 IRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI------------ 466 (584)
Q Consensus 427 ~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~------------ 466 (584)
+++|+|.+++.. . -|+++.+.|+.+..+..++..+++...
T Consensus 91 ~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 170 (287)
T 1u59_A 91 AGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTAR 170 (287)
T ss_dssp CTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCC
T ss_pred CCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeeeccCcceeecc
Confidence 999999877632 2 357778888888777778887776432
Q ss_pred --ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC-CCCccccChhhhh
Q 007935 467 --SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER-RPLSEVIDPALVK 542 (584)
Q Consensus 467 --~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~d~~~~~ 542 (584)
..+|..|+|||++.. ..++.++|||||||++|||+| |+.||..... ........... ...+..+++
T Consensus 171 ~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-----~~~~~~i~~~~~~~~~~~~~~---- 240 (287)
T 1u59_A 171 SAGKWPLKWYAPECINF-RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG-----PEVMAFIEQGKRMECPPECPP---- 240 (287)
T ss_dssp CSSCCCGGGCCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT-----HHHHHHHHTTCCCCCCTTCCH----
T ss_pred ccccccccccCHHHhcc-CCCCchhhHHHHHHHHHHHHcCCCCCcccCCH-----HHHHHHHhcCCcCCCCCCcCH----
Confidence 235778999999654 678999999999999999999 9999975322 22222222221 122233333
Q ss_pred hhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 543 EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 543 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.+.+++..||+.||++|||+.|+++.|+++.
T Consensus 241 ---------~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 271 (287)
T 1u59_A 241 ---------ELYALMSDCWIYKWEDRPDFLTVEQRMRACY 271 (287)
T ss_dssp ---------HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---------HHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 3445777799999999999999999999874
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=8e-30 Score=261.00 Aligned_cols=206 Identities=21% Similarity=0.246 Sum_probs=153.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHH-HHhcCCCceeeeeEEEEeCCceeEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEA-IARVQHPNIVRLKAFYYANDEKLLI 423 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~-l~~l~HpnIV~l~g~~~~~~~~~lV 423 (584)
.++||+|+||.||+|+...++ +.||||++++.. .....+.+.+|..+ ++.++|||||++++++.+.+..|+|
T Consensus 43 ~~~lG~G~fg~V~~~~~~~~~-----~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv 117 (373)
T 2r5t_A 43 LKVIGKGSFGKVLLARHKAEE-----VFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV 117 (373)
T ss_dssp EEEEECCTTCEEEEEEETTTC-----CEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred EEEEeeCCCeEEEEEEEcCCC-----CEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence 468999999999999998765 899999997652 22233567788877 5778999999999999999999999
Q ss_pred eecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCcc-----------
Q 007935 424 SDFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR----------- 465 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~----------- 465 (584)
|||+++|+|.++++ .. .|++++++|+.+..++.++..|+|..
T Consensus 118 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~~~~ 197 (373)
T 2r5t_A 118 LDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTS 197 (373)
T ss_dssp EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCCCCC
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCccccccccCCCccc
Confidence 99999999976653 33 46888889988888888888888743
Q ss_pred cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhh
Q 007935 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIH 545 (584)
Q Consensus 466 ~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~ 545 (584)
..+||+.|+|||++. +..++.++|||||||++|||++|+.||.+ ................++..+++.+
T Consensus 198 ~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~G~~Pf~~-----~~~~~~~~~i~~~~~~~~~~~~~~~----- 266 (373)
T 2r5t_A 198 TFCGTPEYLAPEVLH-KQPYDRTVDWWCLGAVLYEMLYGLPPFYS-----RNTAEMYDNILNKPLQLKPNITNSA----- 266 (373)
T ss_dssp SBSCCCCCCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSSCTTCC-----SBHHHHHHHHHHSCCCCCSSSCHHH-----
T ss_pred cccCCccccCHHHhC-CCCCCchhhhHHHHHHHHHHHcCCCCCCC-----CCHHHHHHHHHhcccCCCCCCCHHH-----
Confidence 236899999999955 46899999999999999999999999974 2334445555544444444444444
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 546 AKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+++.+||+.||.+||++.+.++
T Consensus 267 --------~~li~~lL~~dp~~R~~~~~~~~ 289 (373)
T 2r5t_A 267 --------RHLLEGLLQKDRTKRLGAKDDFM 289 (373)
T ss_dssp --------HHHHHHHTCSSGGGSTTTTTTHH
T ss_pred --------HHHHHHHcccCHHhCCCCCCCHH
Confidence 34666799999999999864443
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-29 Score=272.58 Aligned_cols=209 Identities=24% Similarity=0.370 Sum_probs=164.0
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
..+.||+|+||.||+|.+..+ ..||||+++..... .++|.+|+++|++++|||||++++++.+ +..++|||
T Consensus 271 ~~~~lG~G~fg~Vy~~~~~~~------~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e 341 (535)
T 2h8h_A 271 LEVKLGQGCFGEVWMGTWNGT------TRVAIKTLKPGTMS--PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 341 (535)
T ss_dssp EEEEEEECSSEEEEEEEETTT------EEEEEEEECTTSSC--HHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred hheecccCCCeEEEEEEECCC------ceEEEEEeCCCCCC--HHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeee
Confidence 457899999999999999776 78999999865332 3789999999999999999999999866 77999999
Q ss_pred cccCCcHHHHHhc-----------------------------ccccccCCCCccccccCeEEecCCCccc----------
Q 007935 426 FIRNGSLYAALHG-----------------------------FGLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 426 y~~~GsL~~~L~~-----------------------------~g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
||++|+|.++|+. ..|+++++.|+.+..+..++..|||...
T Consensus 342 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 421 (535)
T 2h8h_A 342 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 421 (535)
T ss_dssp CCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTT
T ss_pred hhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecc
Confidence 9999999877752 2467888888888877888888887542
Q ss_pred --ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC-CCCccccChhhhh
Q 007935 467 --SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER-RPLSEVIDPALVK 542 (584)
Q Consensus 467 --~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~d~~~~~ 542 (584)
..++..|+|||++.. ..++.++|||||||++|||+| |+.||.+.. ..+......... .+.+..+++
T Consensus 422 ~~~~~~~~y~aPE~~~~-~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~-----~~~~~~~i~~~~~~~~~~~~~~---- 491 (535)
T 2h8h_A 422 QGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELTTKGRVPYPGMV-----NREVLDQVERGYRMPCPPECPE---- 491 (535)
T ss_dssp CSTTSCGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHTTTTCCSSTTCC-----HHHHHHHHHTTCCCCCCTTCCH----
T ss_pred cCCcCcccccCHHHhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHcCCCCCCCCCCCH----
Confidence 235678999998655 589999999999999999999 999997532 223333322221 111222222
Q ss_pred hhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 543 EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 543 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.+.+++.+||+.||++|||+.+|++.|+++.
T Consensus 492 ---------~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~ 522 (535)
T 2h8h_A 492 ---------SLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 522 (535)
T ss_dssp ---------HHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred ---------HHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 3456888899999999999999999999874
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-29 Score=251.35 Aligned_cols=217 Identities=20% Similarity=0.309 Sum_probs=160.6
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEe-CCceeEee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYA-NDEKLLIS 424 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~-~~~~~lV~ 424 (584)
..+.||+|+||.||+|+....++ ....||||.+.........+.|.+|+.++++++|||||+++++|.+ ++..++||
T Consensus 29 ~~~~lg~G~~g~Vy~~~~~~~~~--~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~ 106 (298)
T 3f66_A 29 FNEVIGRGHFGCVYHGTLLDNDG--KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 106 (298)
T ss_dssp EEEEEEEETTEEEEEEEEC-------CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred hcceeeecCCceEEEEEEecCCC--ceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEE
Confidence 35789999999999999765431 1257999999876555556889999999999999999999999754 56789999
Q ss_pred ecccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc----------
Q 007935 425 DFIRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 425 Ey~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
||+++|+|.++++. . -|+++++.|+.+..+..++..++|...
T Consensus 107 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~ 186 (298)
T 3f66_A 107 PYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV 186 (298)
T ss_dssp ECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGCBC
T ss_pred eCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECcccccccccccchhcc
Confidence 99999999777642 2 367788888888777778887876432
Q ss_pred -----ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCC-CCccccChh
Q 007935 467 -----SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERR-PLSEVIDPA 539 (584)
Q Consensus 467 -----~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~d~~ 539 (584)
..+|+.|+|||.+.. ..++.++||||||+++|||++ |.+||...... .... ....... ..+..+++
T Consensus 187 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~- 259 (298)
T 3f66_A 187 HNKTGAKLPVKWMALESLQT-QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITV---YLLQGRRLLQPEYCPD- 259 (298)
T ss_dssp -----CCBCGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT--THHH---HHHTTCCCCCCTTCCH-
T ss_pred ccccCCCCCccccChHHhcC-CCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH--HHHH---HHhcCCCCCCCccCCH-
Confidence 245678999998554 689999999999999999999 55556543221 1221 1222211 11222232
Q ss_pred hhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 540 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
.+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 260 ------------~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 291 (298)
T 3f66_A 260 ------------PLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 291 (298)
T ss_dssp ------------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ------------HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 34567788999999999999999999999854
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=99.96 E-value=3.8e-29 Score=251.64 Aligned_cols=211 Identities=16% Similarity=0.170 Sum_probs=160.3
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcch-----hhHhHHHHHHHHHhcCCCceeeeeEEEEeCCce
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATW-----RFKDFESEVEAIARVQHPNIVRLKAFYYANDEK 420 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~-----~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~ 420 (584)
..+.||+|+||.||+|+...++ +.||||.++...... ..++|.+|++++++++||||+++++++.+.+..
T Consensus 16 ~~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 16 IGEELGSGQFAIVKKCREKSTG-----LEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp EEEEEEECSSEEEEEEEETTTC-----CEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred EeeEeeecCCEEEEEEEECCCC-----eEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 3568999999999999988765 899999997652211 247799999999999999999999999999999
Q ss_pred eEeeecccCCcHHHHHh-------------------------cc--cccccCCCCccccccC----eEEecCCCcc----
Q 007935 421 LLISDFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNE----TIVTSGTGSR---- 465 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~----~~~~~~~~~~---- 465 (584)
++||||+++|+|.+++. .. -|+++.+.|+.+..++ .++..++|..
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~ 170 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170 (321)
T ss_dssp EEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECC
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecC
Confidence 99999999999977664 22 3577778887776665 5677777643
Q ss_pred ------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChh
Q 007935 466 ------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPA 539 (584)
Q Consensus 466 ------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~ 539 (584)
...||+.|+|||++. +..++.++|||||||++|||+||+.||.+. ................ ++.
T Consensus 171 ~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~-----~~~~~~~~i~~~~~~~----~~~ 240 (321)
T 2a2a_A 171 DGVEFKNIFGTPEFVAPEIVN-YEPLGLEADMWSIGVITYILLSGASPFLGD-----TKQETLANITSVSYDF----DEE 240 (321)
T ss_dssp TTCCCCCCCSCGGGCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSCCSSCCS-----SHHHHHHHHHTTCCCC----CHH
T ss_pred ccccccccCCCCCccCccccc-CCCCCCccccHHHHHHHHHHHHCCCCCCCC-----CHHHHHHHHHhccccc----Chh
Confidence 235899999999854 468899999999999999999999999742 2233333333222211 111
Q ss_pred hhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 540 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
..... ...+.+++.+||+.||++|||+.|+++
T Consensus 241 ~~~~~-----~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 241 FFSHT-----SELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp HHTTC-----CHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred hhccc-----CHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 11111 124567888999999999999999986
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-29 Score=254.34 Aligned_cols=217 Identities=22% Similarity=0.328 Sum_probs=156.0
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCce----
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK---- 420 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~---- 420 (584)
..+.||+|+||.||+|+....+.. ...||||.++... .....++|.+|++++++++|||||++++++...+..
T Consensus 27 ~~~~lg~G~~g~Vy~~~~~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 104 (323)
T 3qup_A 27 LGRMLGKGEFGSVREAQLKQEDGS--FVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLP 104 (323)
T ss_dssp EEEEEEEETTEEEEEEEC---------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------
T ss_pred EeceecccCCeEEEEEEEcccCCc--ceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCC
Confidence 356899999999999998765311 1379999997652 334457899999999999999999999999887665
Q ss_pred --eEeeecccCCcHHHHHh-------------------------------cc--cccccCCCCccccccCeEEecCCCcc
Q 007935 421 --LLISDFIRNGSLYAALH-------------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR 465 (584)
Q Consensus 421 --~lV~Ey~~~GsL~~~L~-------------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~ 465 (584)
++||||+++|+|.+++. +. -|+++++.|+.+..+..++..|+|..
T Consensus 105 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~kl~Dfg~a 184 (323)
T 3qup_A 105 IPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLS 184 (323)
T ss_dssp CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC-
T ss_pred ccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCEEEeecccc
Confidence 99999999999976663 22 36778888888887888888888743
Q ss_pred c-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC-C
Q 007935 466 I-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER-R 530 (584)
Q Consensus 466 ~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~-~ 530 (584)
. ..++..|+|||++.. ..++.++|||||||++|||+| |+.||.+.... . ......... .
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~---~~~~~~~~~~~ 258 (323)
T 3qup_A 185 RKIYSGDYYRQGCASKLPVKWLALESLAD-NLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA--E---IYNYLIGGNRL 258 (323)
T ss_dssp ----------------CCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--G---HHHHHHTTCCC
T ss_pred ccccccccccccccccCcccccCchhhcC-CCCCCccchhhHHHHHHHHHhCCCCCccccChH--H---HHHHHhcCCCC
Confidence 2 245678999999554 679999999999999999999 99999753321 1 222222221 1
Q ss_pred CCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 531 PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 531 ~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
.....+++ .+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 259 ~~~~~~~~-------------~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~ 298 (323)
T 3qup_A 259 KQPPECME-------------EVYDLMYQCWSADPKQRPSFTCLRMELENILG 298 (323)
T ss_dssp CCCTTCCH-------------HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCccCH-------------HHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 12222222 34567888999999999999999999998743
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=2.6e-29 Score=252.12 Aligned_cols=219 Identities=21% Similarity=0.317 Sum_probs=165.4
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCC-ceeEe
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYAND-EKLLI 423 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~-~~~lV 423 (584)
..+.||+|+||.||+|+..........+.||||+++........+.+.+|++++.++ +|||||++++++.+.+ ..++|
T Consensus 31 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv 110 (316)
T 2xir_A 31 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 110 (316)
T ss_dssp EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEE
T ss_pred eeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEE
Confidence 357899999999999987543333344899999998765544557899999999999 7999999999998765 48999
Q ss_pred eecccCCcHHHHHhc-----------------------------------------c--cccccCCCCccccccCeEEec
Q 007935 424 SDFIRNGSLYAALHG-----------------------------------------F--GLNRLLPGTSKVTKNETIVTS 460 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~~-----------------------------------------~--g~~~~~~~~~~i~~~~~~~~~ 460 (584)
|||+++|+|.++++. . .|+++.+.|+.+..+..++..
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~ 190 (316)
T 2xir_A 111 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKIC 190 (316)
T ss_dssp EECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEEC
T ss_pred EEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEC
Confidence 999999999877642 1 356777778777777778887
Q ss_pred CCCccc-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHh
Q 007935 461 GTGSRI-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAF 526 (584)
Q Consensus 461 ~~~~~~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~ 526 (584)
++|... ..||..|+|||++.. ..++.++|||||||++|||+| |+.||....... .......
T Consensus 191 Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~----~~~~~~~ 265 (316)
T 2xir_A 191 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE----EFCRRLK 265 (316)
T ss_dssp CCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH----HHHHHHH
T ss_pred CCccccccccCccceeccCCCcceeecCchhhcc-ccccchhHHHHHHHHHHHHHhCCCCCCcccchhH----HHHHHhc
Confidence 776432 245778999998654 678999999999999999999 999997543221 1222221
Q ss_pred hc-CCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 527 RE-RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 527 ~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.. ....+..+++. +.+++.+||+.||.+|||+.|+++.|+++.
T Consensus 266 ~~~~~~~~~~~~~~-------------l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 309 (316)
T 2xir_A 266 EGTRMRAPDYTTPE-------------MYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309 (316)
T ss_dssp HTCCCCCCTTCCHH-------------HHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cCccCCCCCCCCHH-------------HHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 11 11223333333 445777799999999999999999999874
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5.6e-30 Score=256.54 Aligned_cols=215 Identities=21% Similarity=0.229 Sum_probs=158.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCce----
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK---- 420 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~---- 420 (584)
.+.||+|+||.||+|+....+ +.||||+++... .....+.|.+|++++++++|||||++++++...+..
T Consensus 17 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 91 (311)
T 3ork_A 17 GEILGFGGMSEVHLARDLRDH-----RDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 91 (311)
T ss_dssp EEEEEECSSEEEEEEEETTTT-----EEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred EEEEccCCCEEEEEEEECCCC-----ceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence 467999999999999987665 899999998652 223346799999999999999999999999876544
Q ss_pred eEeeecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCccc-------
Q 007935 421 LLISDFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI------- 466 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~------- 466 (584)
++||||+++|+|.++++ +. -|+++++.|+.+..++.++..++|...
T Consensus 92 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~ 171 (311)
T 3ork_A 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 171 (311)
T ss_dssp EEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC--------
T ss_pred EEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCccccccccc
Confidence 99999999999976664 22 367788888888778888888887432
Q ss_pred -------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChh
Q 007935 467 -------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPA 539 (584)
Q Consensus 467 -------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~ 539 (584)
..||+.|+|||++. +..++.++|||||||++|||+||+.||.+. .....................+.
T Consensus 172 ~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~~l~~ll~g~~pf~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 245 (311)
T 3ork_A 172 SVTQTAAVIGTAQYLSPEQAR-GDSVDARSDVYSLGCVLYEVLTGEPPFTGD-----SPVSVAYQHVREDPIPPSARHEG 245 (311)
T ss_dssp ----------CCTTCCHHHHH-TCCCCHHHHHHHHHHHHHHHHHSSCSCCCS-----SHHHHHHHHHHCCCCCHHHHSTT
T ss_pred ccccccccCcCcccCCHHHhc-CCCCCchHhHHHHHHHHHHHHhCCCCCCCC-----ChHHHHHHHhcCCCCCcccccCC
Confidence 24799999999954 468999999999999999999999999742 22333333333222111111111
Q ss_pred hhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHH-HHHHhh
Q 007935 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVS-ESLDRV 581 (584)
Q Consensus 540 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~-~~L~~i 581 (584)
....+.+++.+||+.||++||++.+++ ..+.++
T Consensus 246 ---------~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 246 ---------LSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp ---------CCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred ---------CCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 112455688889999999999777665 445544
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.8e-29 Score=249.35 Aligned_cols=206 Identities=17% Similarity=0.252 Sum_probs=160.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||++....++ +.||+|.+.... .....+.+.+|+.++++++|||||++++++.+.+..++||
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~-----~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 94 (294)
T 2rku_A 20 GRFLGKGGFAKCFEISDADTK-----EVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 94 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTC-----CEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred EEEEeecCCEEEEEEEECCCC-----ceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence 468999999999999998765 799999987642 2334577999999999999999999999999999999999
Q ss_pred ecccCCcHHHHH-------------------------hccc--ccccCCCCccccccCeEEecCCCccc-----------
Q 007935 425 DFIRNGSLYAAL-------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSRI----------- 466 (584)
Q Consensus 425 Ey~~~GsL~~~L-------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~----------- 466 (584)
||+++++|.+++ |..| |+++.+.|+.+..+..++..+++...
T Consensus 95 e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 174 (294)
T 2rku_A 95 ELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV 174 (294)
T ss_dssp ECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBCC
T ss_pred ecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCceecccCcccccc
Confidence 999999996554 3333 57777788877777777777776432
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhH
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 546 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 546 (584)
..||..|+|||++. +..++.++||||||+++|||+||+.||... ...+...........++..+++.+
T Consensus 175 ~~~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~~l~~g~~p~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~------ 242 (294)
T 2rku_A 175 LCGTPNYIAPEVLS-KKGHSFEVDVWSIGCIMYTLLVGKPPFETS-----CLKETYLRIKKNEYSIPKHINPVA------ 242 (294)
T ss_dssp CCSCCSSCCHHHHT-TSCBCTHHHHHHHHHHHHHHHHSSCTTCCS-----SHHHHHHHHHTTCCCCCTTSCHHH------
T ss_pred ccCCCCcCCcchhc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHhhccCCCccccCHHH------
Confidence 35788999999954 467899999999999999999999999742 223333333333333344444433
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 547 KRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 547 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+++.+||+.||++|||+.|+++
T Consensus 243 -------~~li~~~l~~~p~~Rps~~~ll~ 265 (294)
T 2rku_A 243 -------ASLIQKMLQTDPTARPTINELLN 265 (294)
T ss_dssp -------HHHHHHHTCSSGGGSCCGGGGGG
T ss_pred -------HHHHHHHcccChhhCcCHHHHhh
Confidence 45677799999999999999985
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-29 Score=254.49 Aligned_cols=214 Identities=23% Similarity=0.306 Sum_probs=162.3
Q ss_pred cceeceeecCceEEEEEecCCCCCCCce--EEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeE
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPT--VVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLL 422 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~--~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~l 422 (584)
..+.||+|+||.||+|+...++ . .||||+++........+.+.+|+++++++ +||||+++++++.+.+..++
T Consensus 29 ~~~~lg~G~~g~Vy~~~~~~~~-----~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 103 (327)
T 1fvr_A 29 FQDVIGEGNFGQVLKARIKKDG-----LRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 103 (327)
T ss_dssp EEEEEECGGGCEEEEEEEEETT-----EEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred ceeeeecCCCceEEEEEEccCC-----cccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence 3568999999999999987664 4 45999998654444557899999999999 99999999999999999999
Q ss_pred eeecccCCcHHHHHhc-----------------------------------------c--cccccCCCCccccccCeEEe
Q 007935 423 ISDFIRNGSLYAALHG-----------------------------------------F--GLNRLLPGTSKVTKNETIVT 459 (584)
Q Consensus 423 V~Ey~~~GsL~~~L~~-----------------------------------------~--g~~~~~~~~~~i~~~~~~~~ 459 (584)
||||+++|+|.++++. . -|+++.+.|+.+..+..++.
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL 183 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKI 183 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEE
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeEEE
Confidence 9999999999887743 1 35777788888877777888
Q ss_pred cCCCccc----------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhc
Q 007935 460 SGTGSRI----------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRE 528 (584)
Q Consensus 460 ~~~~~~~----------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~ 528 (584)
.++|... ..++..|+|||++.. ..++.++|||||||++|||+| |+.||.+. ............
T Consensus 184 ~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~pf~~~-----~~~~~~~~~~~~ 257 (327)
T 1fvr_A 184 ADFGLSRGQEVYVKKTMGRLPVRWMAIESLNY-SVYTTNSDVWSYGVLLWEIVSLGGTPYCGM-----TCAELYEKLPQG 257 (327)
T ss_dssp CCTTCEESSCEECCC----CCTTTCCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCTTTTC-----CHHHHHHHGGGT
T ss_pred cccCcCccccccccccCCCCCccccChhhhcc-ccCCchhcchHHHHHHHHHHcCCCCCCCCC-----cHHHHHHHhhcC
Confidence 8877432 246778999998554 678999999999999999998 99999742 223333333222
Q ss_pred C-CCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 529 R-RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 529 ~-~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
. ...+..+++ .+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 258 ~~~~~~~~~~~-------------~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 300 (327)
T 1fvr_A 258 YRLEKPLNCDD-------------EVYDLMRQCWREKPYERPSFAQILVSLNRMLE 300 (327)
T ss_dssp CCCCCCTTBCH-------------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCH-------------HHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 1 111222232 34567788999999999999999999998743
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-29 Score=250.74 Aligned_cols=212 Identities=25% Similarity=0.386 Sum_probs=164.3
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
..+.||+|+||.||+|.....+ ..||||.+..... ..+.|.+|++++++++||||+++++++.+++..++|||
T Consensus 17 ~~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 89 (288)
T 3kfa_A 17 MKHKLGGGQYGEVYEGVWKKYS-----LTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 89 (288)
T ss_dssp EEEESGGGTTCSEEEEEEGGGT-----EEEEEEEECSCST--HHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred EEeecCCCCceeEEEeEecCCC-----EEEEEEecCcCHH--HHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence 3468999999999999998765 8999999976432 34789999999999999999999999999999999999
Q ss_pred cccCCcHHHHHhc---------------------------c--cccccCCCCccccccCeEEecCCCccc----------
Q 007935 426 FIRNGSLYAALHG---------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 426 y~~~GsL~~~L~~---------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
|+++|+|.++++. . -|+++.+.|+.+..+..++..+++...
T Consensus 90 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 169 (288)
T 3kfa_A 90 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 169 (288)
T ss_dssp CCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEE
T ss_pred cCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceeccCCccccc
Confidence 9999999777642 2 367778888888777778888876432
Q ss_pred --ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhh
Q 007935 467 --SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKE 543 (584)
Q Consensus 467 --~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~ 543 (584)
..+|..|+|||++.. ..++.++||||||+++|||++ |+.||..... ......+.... ....+..+++
T Consensus 170 ~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~--~~~~~~~~~~~--~~~~~~~~~~----- 239 (288)
T 3kfa_A 170 AGAKFPIKWTAPESLAY-NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--SQVYELLEKDY--RMERPEGCPE----- 239 (288)
T ss_dssp TTEEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG--GGHHHHHHTTC--CCCCCTTCCH-----
T ss_pred cCCccccCcCChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHhccC--CCCCCCCCCH-----
Confidence 235667999999654 678999999999999999999 9999975322 12222222111 1112222333
Q ss_pred hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 544 IHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 544 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.+.+++.+||+.||.+|||+.|+++.|+++.
T Consensus 240 --------~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~ 270 (288)
T 3kfa_A 240 --------KVYELMRACWQWNPSDRPSFAEIHQAFETMF 270 (288)
T ss_dssp --------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --------HHHHHHHHHhCCChhhCcCHHHHHHHHHHHH
Confidence 3455777799999999999999999998864
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=99.96 E-value=3e-29 Score=251.75 Aligned_cols=215 Identities=19% Similarity=0.226 Sum_probs=156.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
+++||+|+||.||+|+....+ +.||||++.... ....+.+.+|++++.++ +|||||++++++.+++..++|||
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~-~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 91 (316)
T 2ac3_A 18 EDVLGEGAHARVQTCINLITS-----QEYAVKIIEKQP-GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE 91 (316)
T ss_dssp CCCCCCCSSEEEEEEECSSSC-----CEEEEEEEECCS-SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CceecCCceEEEEEEEEcCCC-----cEEEEEEEeeCc-chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence 457999999999999987665 899999997653 23347899999999995 79999999999999999999999
Q ss_pred cccCCcHHHHHh-------------------------cc--cccccCCCCccccccCe---EEecCCCccc---------
Q 007935 426 FIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNET---IVTSGTGSRI--------- 466 (584)
Q Consensus 426 y~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~---~~~~~~~~~~--------- 466 (584)
|+++|+|.++++ +. .|++++++|+.+..++. ++..+++...
T Consensus 92 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~ 171 (316)
T 2ac3_A 92 KMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCS 171 (316)
T ss_dssp CCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC---------
T ss_pred cCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccc
Confidence 999999976664 22 36777778877765543 6666665321
Q ss_pred ---------ccCCCcccCcccccc----CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCc----------HHHHHH
Q 007935 467 ---------SAISNVYLAPEARIY----GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKG----------LESLVR 523 (584)
Q Consensus 467 ---------~~gt~~y~aPE~~~~----~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~----------l~~~~~ 523 (584)
..||..|+|||++.. ...++.++|||||||++|||+||+.||......... ...+..
T Consensus 172 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (316)
T 2ac3_A 172 PISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFE 251 (316)
T ss_dssp ----------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHH
T ss_pred cccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHH
Confidence 248999999998543 135789999999999999999999999864332211 111222
Q ss_pred HHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 524 KAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 524 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
........++. ..... ....+.+++.+||+.||++|||+.|+++
T Consensus 252 ~i~~~~~~~~~----~~~~~-----~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 252 SIQEGKYEFPD----KDWAH-----ISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHCCCCCCH----HHHTT-----SCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHhccCcccCc----hhccc-----CCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 22222222111 00000 1124567888899999999999999986
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.3e-29 Score=253.57 Aligned_cols=222 Identities=21% Similarity=0.261 Sum_probs=166.4
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHh--cCCCceeeeeEEEEeCC----c
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIAR--VQHPNIVRLKAFYYAND----E 419 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~--l~HpnIV~l~g~~~~~~----~ 419 (584)
..+.||+|+||.||+|+.. + +.||||++.... .+.+.+|++++.. ++||||+++++++...+ .
T Consensus 46 ~~~~lg~G~~g~Vy~~~~~-~------~~vavK~~~~~~----~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~ 114 (342)
T 1b6c_B 46 LQESIGKGRFGEVWRGKWR-G------EEVAVKIFSSRE----ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 114 (342)
T ss_dssp EEEEEEEETTEEEEEEEET-T------EEEEEEEECGGG----HHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCC
T ss_pred EEeeecCCCCcEEEEEEEc-C------ccEEEEEeCchh----HHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccce
Confidence 3578999999999999984 3 799999997532 2678899999988 79999999999998876 7
Q ss_pred eeEeeecccCCcHHHHH------------------------h--------cc--cccccCCCCccccccCeEEecCCCcc
Q 007935 420 KLLISDFIRNGSLYAAL------------------------H--------GF--GLNRLLPGTSKVTKNETIVTSGTGSR 465 (584)
Q Consensus 420 ~~lV~Ey~~~GsL~~~L------------------------~--------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~ 465 (584)
.++||||+++|+|.+++ | .. -|+++++.|+.+..+..++..+++..
T Consensus 115 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~ 194 (342)
T 1b6c_B 115 LWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 194 (342)
T ss_dssp EEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred eEEEEeecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCCc
Confidence 89999999999996554 5 22 35677778887777777888777642
Q ss_pred ---------------cccCCCcccCccccccCC-----CCCCccchhhHHHHHHHHHhC----------CCCCCCCCCCC
Q 007935 466 ---------------ISAISNVYLAPEARIYGS-----KFTQKCDVYSFGIVLLEILTG----------RLPDAGPENDG 515 (584)
Q Consensus 466 ---------------~~~gt~~y~aPE~~~~~~-----~~~~ksDV~SfGvvl~ElltG----------~~p~~~~~~~~ 515 (584)
...||..|+|||++.... .++.++|||||||++|||+|| +.||.......
T Consensus 195 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~ 274 (342)
T 1b6c_B 195 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 274 (342)
T ss_dssp EEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCc
Confidence 126889999999854421 233689999999999999999 78887654444
Q ss_pred CcHHHHHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhcC
Q 007935 516 KGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKLQ 584 (584)
Q Consensus 516 ~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~ 584 (584)
.....+......... ...+.... ........+.+++.+||+.||++|||+.||++.|+++..+
T Consensus 275 ~~~~~~~~~~~~~~~--~~~~~~~~----~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~ 337 (342)
T 1b6c_B 275 PSVEEMRKVVCEQKL--RPNIPNRW----QSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 337 (342)
T ss_dssp CCHHHHHHHHTTSCC--CCCCCGGG----GTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHh--CCCCcccc----cchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHH
Confidence 445554444332221 11111111 1223455778899999999999999999999999998654
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.3e-29 Score=254.80 Aligned_cols=206 Identities=17% Similarity=0.244 Sum_probs=161.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||++....++ +.||+|.+.... .....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 46 ~~~lg~G~~g~Vy~~~~~~~~-----~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 120 (335)
T 2owb_A 46 GRFLGKGGFAKCFEISDADTK-----EVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 120 (335)
T ss_dssp EEEEEEETTEEEEEEEETTTC-----CEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred EEEEeeCCCeEEEEEEECCCC-----CEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 467999999999999998765 799999987642 2334578999999999999999999999999999999999
Q ss_pred ecccCCcHHHHH-------------------------hcc--cccccCCCCccccccCeEEecCCCccc-----------
Q 007935 425 DFIRNGSLYAAL-------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSRI----------- 466 (584)
Q Consensus 425 Ey~~~GsL~~~L-------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~----------- 466 (584)
||+++++|.+++ |.. .|+++.+.|+.+..+..++..+++...
T Consensus 121 e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 200 (335)
T 2owb_A 121 ELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV 200 (335)
T ss_dssp CCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBCC
T ss_pred ecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceecccCcccccc
Confidence 999999996554 333 367778888887777777887776432
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhH
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 546 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 546 (584)
..||..|+|||++.. ..++.++|||||||++|||++|+.||... ...............++..+++.+
T Consensus 201 ~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~-----~~~~~~~~~~~~~~~~~~~~~~~~------ 268 (335)
T 2owb_A 201 LCGTPNYIAPEVLSK-KGHSFEVDVWSIGCIMYTLLVGKPPFETS-----CLKETYLRIKKNEYSIPKHINPVA------ 268 (335)
T ss_dssp CCSCCSSCCHHHHHT-SCBCTHHHHHHHHHHHHHHHHSSCTTCCS-----SHHHHHHHHHHTCCCCCTTSCHHH------
T ss_pred cCCCccccCHHHhcc-CCCCchhhHHHHHHHHHHHHHCcCCCCCC-----CHHHHHHHHhcCCCCCCccCCHHH------
Confidence 358889999999554 67899999999999999999999999742 223333333333333444444443
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 547 KRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 547 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+++.+||+.||++|||+.|+++
T Consensus 269 -------~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 269 -------ASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp -------HHHHHHHTCSSGGGSCCGGGGGG
T ss_pred -------HHHHHHHccCChhHCcCHHHHhc
Confidence 44677799999999999999985
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-29 Score=251.53 Aligned_cols=216 Identities=20% Similarity=0.312 Sum_probs=159.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|+... .||||.++... .....+.|.+|++++++++||||+++++++ ..+..++|||
T Consensus 29 ~~~lG~G~~g~Vy~~~~~~--------~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 99 (289)
T 3og7_A 29 GQRIGSGSFGTVYKGKWHG--------DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 99 (289)
T ss_dssp EEEEEECSSEEEEEEESSS--------EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred eeEecCCCCeEEEEEEEcC--------ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence 4679999999999998643 59999997653 334457899999999999999999999965 5667899999
Q ss_pred cccCCcHHHHHh--------------------------cc--cccccCCCCccccccCeEEecCCCccc-----------
Q 007935 426 FIRNGSLYAALH--------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI----------- 466 (584)
Q Consensus 426 y~~~GsL~~~L~--------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~----------- 466 (584)
|+++|+|.++++ +. -|+++++.|+.+..++.++..+++...
T Consensus 100 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 179 (289)
T 3og7_A 100 WCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQF 179 (289)
T ss_dssp CCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC--------------
T ss_pred ecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceeccccccccccccc
Confidence 999999977663 22 367788888888778888888876432
Q ss_pred --ccCCCcccCccccc--cCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC-CccccChhhh
Q 007935 467 --SAISNVYLAPEARI--YGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP-LSEVIDPALV 541 (584)
Q Consensus 467 --~~gt~~y~aPE~~~--~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~d~~~~ 541 (584)
..||..|+|||++. .+..++.++|||||||++|||++|+.||..... .............. ....+....
T Consensus 180 ~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~- 254 (289)
T 3og7_A 180 EQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINN----RDQIIEMVGRGSLSPDLSKVRSNC- 254 (289)
T ss_dssp ----CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCC----HHHHHHHHHHTSCCCCTTSSCTTS-
T ss_pred cccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccch----HHHHHHHhcccccCcchhhccccC-
Confidence 35899999999854 235688899999999999999999999975322 22222222221111 011111111
Q ss_pred hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhcC
Q 007935 542 KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKLQ 584 (584)
Q Consensus 542 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~ 584 (584)
...+.+++.+||+.||++|||+.|+++.|+++..+
T Consensus 255 --------~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~e 289 (289)
T 3og7_A 255 --------PKRMKRLMAECLKKKRDERPSFPRILAEIEELARE 289 (289)
T ss_dssp --------CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTCC
T ss_pred --------CHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhhC
Confidence 12456688889999999999999999999998764
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-29 Score=256.78 Aligned_cols=205 Identities=17% Similarity=0.278 Sum_probs=155.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCc-------
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDE------- 419 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~------- 419 (584)
.+.||+|+||.||+|+...++ +.||||+++........+.+.+|++++++++|||||+++++|.+.+.
T Consensus 11 ~~~lG~G~~g~V~~a~~~~~~-----~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 85 (332)
T 3qd2_B 11 IQCMGRGGFGVVFEAKNKVDD-----CNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM 85 (332)
T ss_dssp EEEEECC-CSEEEEEEETTTC-----CEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred eeEecCCCCeEEEEEEEcCCC-----cEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence 467999999999999998665 89999999865544455889999999999999999999999876543
Q ss_pred --------------------------------------------------eeEeeecccCCcHHHHHh------------
Q 007935 420 --------------------------------------------------KLLISDFIRNGSLYAALH------------ 437 (584)
Q Consensus 420 --------------------------------------------------~~lV~Ey~~~GsL~~~L~------------ 437 (584)
.++||||+++|+|.++++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~ 165 (332)
T 3qd2_B 86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGV 165 (332)
T ss_dssp HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHH
T ss_pred hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHH
Confidence 799999999999976653
Q ss_pred ----------------cc--cccccCCCCccccccCeEEecCCCccc-----------------------ccCCCcccCc
Q 007935 438 ----------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI-----------------------SAISNVYLAP 476 (584)
Q Consensus 438 ----------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~-----------------------~~gt~~y~aP 476 (584)
+. -|++++++|+.+..++.++..|+|... ..||+.|+||
T Consensus 166 ~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP 245 (332)
T 3qd2_B 166 CLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSP 245 (332)
T ss_dssp HHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCH
T ss_pred HHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccCh
Confidence 22 367888888888878888888887432 2589999999
Q ss_pred cccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHH
Q 007935 477 EARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHI 556 (584)
Q Consensus 477 E~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l 556 (584)
|++. +..++.++|||||||++|||++|..|+.. ............. + ... ......+.++
T Consensus 246 E~~~-~~~~~~~~Di~slG~il~el~~~~~~~~~-------~~~~~~~~~~~~~--~-----~~~-----~~~~~~~~~l 305 (332)
T 3qd2_B 246 EQIH-GNNYSHKVDIFSLGLILFELLYSFSTQME-------RVRIITDVRNLKF--P-----LLF-----TQKYPQEHMM 305 (332)
T ss_dssp HHHH-CCCCCTHHHHHHHHHHHHHHHSCCCCHHH-------HHHHHHHHHTTCC--C-----HHH-----HHHCHHHHHH
T ss_pred HHhc-CCCCcchhhHHHHHHHHHHHHHcCCChhH-------HHHHHHHhhccCC--C-----ccc-----ccCChhHHHH
Confidence 9955 46899999999999999999998776431 1122222221111 1 110 1112344678
Q ss_pred HhcccCCCCCCCCChHHHHH
Q 007935 557 ALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 557 ~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+.+||+.||++|||+.|+++
T Consensus 306 i~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 306 VQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHHHHCSSGGGSCCHHHHHH
T ss_pred HHHHccCCCCcCCCHHHHhh
Confidence 88999999999999999986
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=6.5e-30 Score=266.55 Aligned_cols=207 Identities=17% Similarity=0.226 Sum_probs=160.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.++||+|+||+||+|+...++ +.||||++++.. .....+.+.+|+.++.+++|||||+++++|.+++..++||
T Consensus 79 ~~~LG~G~fG~V~~~~~~~~~-----~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~ 153 (437)
T 4aw2_A 79 LKVIGRGAFGEVAVVKLKNAD-----KVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVM 153 (437)
T ss_dssp EEEEEECSSEEEEEEEETTTT-----EEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEE
T ss_pred EEEEEeCCCEEEEEEEEcCCC-----cEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEE
Confidence 478999999999999998876 899999997531 1222355999999999999999999999999999999999
Q ss_pred ecccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCcc-----------
Q 007935 425 DFIRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSR----------- 465 (584)
Q Consensus 425 Ey~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~----------- 465 (584)
|||++|+|.++|+. . -|+|++++|+.+..++.++..|||..
T Consensus 154 Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~~~~ 233 (437)
T 4aw2_A 154 DYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQS 233 (437)
T ss_dssp CCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEEC
T ss_pred ecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCCccc
Confidence 99999999877753 2 36888999998888888888888743
Q ss_pred -cccCCCcccCcccccc----CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhc--CCCCcc---c
Q 007935 466 -ISAISNVYLAPEARIY----GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE--RRPLSE---V 535 (584)
Q Consensus 466 -~~~gt~~y~aPE~~~~----~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~--~~~~~~---~ 535 (584)
..+||+.|||||++.. +..++.++|||||||++|||+||+.||.+. ...+........ ...++. .
T Consensus 234 ~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~-----~~~~~~~~i~~~~~~~~~p~~~~~ 308 (437)
T 4aw2_A 234 SVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE-----SLVETYGKIMNHKERFQFPTQVTD 308 (437)
T ss_dssp CSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCS-----SHHHHHHHHHTHHHHCCCCSSCCC
T ss_pred ccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCC-----ChhHHHHhhhhccccccCCccccc
Confidence 1479999999998651 357899999999999999999999999752 222222222211 111222 2
Q ss_pred cChhhhhhhhHHHHHHHHHHHHhcccCCCCCC--CCChHHHHH
Q 007935 536 IDPALVKEIHAKRQVLATFHIALNCTELDPEF--RPRMRTVSE 576 (584)
Q Consensus 536 ~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~--RPt~~ev~~ 576 (584)
+++.+ .+++.+|+..+|++ ||+++|+++
T Consensus 309 ~s~~~-------------~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 309 VSENA-------------KDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp SCHHH-------------HHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred CCHHH-------------HHHHHHHhcccccccCCCCHHHHhC
Confidence 34433 44666788888877 999999875
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.7e-29 Score=248.95 Aligned_cols=215 Identities=20% Similarity=0.234 Sum_probs=159.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|....++ +.||||++.... .....+.|.+|+.++++++||||+++++++.+++..++||
T Consensus 39 ~~~lg~G~~g~Vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 113 (309)
T 2h34_A 39 RRLVGRGGMGDVYEAEDTVRE-----RIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDM 113 (309)
T ss_dssp EEEEEECSSSEEEEEEETTTT-----EEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred EEEEcCCCCeeEEEEEEcCCC-----eEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEE
Confidence 467999999999999987665 899999997652 2223477999999999999999999999999999999999
Q ss_pred ecccCCcHHHHHhc-------------------------c--cccccCCCCccccccCeEEecCCCcc------------
Q 007935 425 DFIRNGSLYAALHG-------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSR------------ 465 (584)
Q Consensus 425 Ey~~~GsL~~~L~~-------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~------------ 465 (584)
||+++|+|.++++. . -|+++.+.|+.+..++.++..+++..
T Consensus 114 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 193 (309)
T 2h34_A 114 RLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLG 193 (309)
T ss_dssp ECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC-------------
T ss_pred EecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCcccccccccccc
Confidence 99999999776642 2 35777788888877777888777632
Q ss_pred cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhh
Q 007935 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIH 545 (584)
Q Consensus 466 ~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~ 545 (584)
...||..|+|||++.. ..++.++||||||+++|||+||+.||... ... ..........+......+.+.
T Consensus 194 ~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~---- 262 (309)
T 2h34_A 194 NTVGTLYYMAPERFSE-SHATYRADIYALTCVLYECLTGSPPYQGD-----QLS-VMGAHINQAIPRPSTVRPGIP---- 262 (309)
T ss_dssp ---CCGGGCCGGGTCC-----CCCHHHHHHHHHHHHHHSSCSSCSC-----HHH-HHHHHHHSCCCCGGGTSTTCC----
T ss_pred ccCCCcCccCHHHHcC-CCCCchHhHHHHHHHHHHHHHCCCCCCCc-----hHH-HHHHHhccCCCCccccCCCCC----
Confidence 2357889999999554 68899999999999999999999999742 112 222222222211111222221
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCC-ChHHHHHHHHhhh
Q 007935 546 AKRQVLATFHIALNCTELDPEFRP-RMRTVSESLDRVK 582 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RP-t~~ev~~~L~~i~ 582 (584)
..+.+++.+||+.||++|| |++++++.|+++.
T Consensus 263 -----~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l 295 (309)
T 2h34_A 263 -----VAFDAVIARGMAKNPEDRYVTCGDLSAAAHAAL 295 (309)
T ss_dssp -----THHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTC
T ss_pred -----HHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHH
Confidence 1344577889999999999 9999999998764
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-29 Score=254.18 Aligned_cols=218 Identities=21% Similarity=0.273 Sum_probs=158.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|+............||||++.........++|.+|+.++++++||||+++++++.+.+..++||||
T Consensus 35 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 114 (327)
T 2yfx_A 35 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMEL 114 (327)
T ss_dssp EEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred EEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEEEEec
Confidence 46799999999999996543222233789999997654445557899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc--------------------------------c--cccccCCCCcccccc---CeEEecCCCcc----
Q 007935 427 IRNGSLYAALHG--------------------------------F--GLNRLLPGTSKVTKN---ETIVTSGTGSR---- 465 (584)
Q Consensus 427 ~~~GsL~~~L~~--------------------------------~--g~~~~~~~~~~i~~~---~~~~~~~~~~~---- 465 (584)
+++|+|.++++. . -|+++.+.|+.+..+ ..++..++|..
T Consensus 115 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~ 194 (327)
T 2yfx_A 115 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 194 (327)
T ss_dssp CTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHH
T ss_pred CCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEECccccccccc
Confidence 999999877753 1 356677777766633 34666676532
Q ss_pred ---------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC-CCCcc
Q 007935 466 ---------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER-RPLSE 534 (584)
Q Consensus 466 ---------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~ 534 (584)
...||..|+|||++.. ..++.++|||||||++|||+| |+.||... ............. .....
T Consensus 195 ~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~-----~~~~~~~~~~~~~~~~~~~ 268 (327)
T 2yfx_A 195 RASYYRKGGCAMLPVKWMPPEAFME-GIFTSKTDTWSFGVLLWEIFSLGYMPYPSK-----SNQEVLEFVTSGGRMDPPK 268 (327)
T ss_dssp C------CCGGGSCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTC-----CHHHHHHHHHTTCCCCCCT
T ss_pred cccccccCCCcCCCcceeCHhHhcC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCc-----CHHHHHHHHhcCCCCCCCC
Confidence 2356888999998655 678999999999999999999 99998742 2223333332222 11222
Q ss_pred ccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 535 VIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 535 ~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
.+++ .+.+++.+||+.||.+|||+.|+++.|+.+..
T Consensus 269 ~~~~-------------~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~ 304 (327)
T 2yfx_A 269 NCPG-------------PVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 304 (327)
T ss_dssp TCCH-------------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCH-------------HHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence 2332 34557788999999999999999999988753
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-29 Score=255.47 Aligned_cols=215 Identities=13% Similarity=0.086 Sum_probs=162.4
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|+...++ +.||||.+..... .+.+.+|+++++++ +||||+++++++.+.+..++|||
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~---~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 14 GKKIGCGNFGELRLGKNLYTN-----EYVAIKLEPMKSR---APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp EEECCC-CTTSEEEEEETTTT-----EEEEEEEEETTCS---SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred EEEeeccCCceEEEEEECCCC-----cEEEEEEeccccc---hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 467999999999999986665 8999999976432 25789999999999 99999999999999999999999
Q ss_pred cccCCcHHHHHh--------------------------cc--cccccCCCCccccccCe-----EEecCCCcc-------
Q 007935 426 FIRNGSLYAALH--------------------------GF--GLNRLLPGTSKVTKNET-----IVTSGTGSR------- 465 (584)
Q Consensus 426 y~~~GsL~~~L~--------------------------~~--g~~~~~~~~~~i~~~~~-----~~~~~~~~~------- 465 (584)
|+ +|+|.++++ +. -|++++++|+.+..++. ++..|||..
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~ 164 (330)
T 2izr_A 86 LL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPE 164 (330)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTT
T ss_pred eC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCC
Confidence 99 999976664 22 36788888887776665 777777632
Q ss_pred -----------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCcc
Q 007935 466 -----------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSE 534 (584)
Q Consensus 466 -----------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 534 (584)
...||+.|+|||++. +..++.++|||||||++|||+||+.||.+...+ ..............+.+
T Consensus 165 ~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~--~~~~~~~~i~~~~~~~~- 240 (330)
T 2izr_A 165 TKKHIPYREHKSLTGTARYMSINTHL-GKEQSRRDDLEALGHMFMYFLRGSLPWQGLKAD--TLKERYQKIGDTKRATP- 240 (330)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCS--SHHHHHHHHHHHHHHSC-
T ss_pred CCccccccccCCcCCCccccChHHHc-CCCCCchhHHHHHHHHHHHHhcCCCCccccccc--cHHHHHHHHHhhhccCC-
Confidence 236899999999955 468999999999999999999999999864322 23333322221111100
Q ss_pred ccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 535 VIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 535 ~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
..... .... ++.+++..||+.||.+||++.+|.+.|+++.
T Consensus 241 ---~~~~~----~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~ 280 (330)
T 2izr_A 241 ---IEVLC----ENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLF 280 (330)
T ss_dssp ---HHHHT----TTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred ---HHHHh----ccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHH
Confidence 00000 0011 5667888899999999999999999998764
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.1e-29 Score=248.58 Aligned_cols=212 Identities=20% Similarity=0.233 Sum_probs=158.0
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
+.||+|+||.||+|...... ..+.||||+++... .....++|.+|++++++++||||+++++++ +.+..++||||
T Consensus 23 ~~lg~G~~g~Vy~~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~ 98 (291)
T 1xbb_A 23 KELGSGNFGTVKKGYYQMKK---VVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEM 98 (291)
T ss_dssp EEEEECSSEEEEEEEEECSS---SEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEEC
T ss_pred CccccccCeeeEeeeecCCC---ceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEe
Confidence 47999999999999653321 12799999998652 233357899999999999999999999999 66789999999
Q ss_pred ccCCcHHHHHhc-------------------------c--cccccCCCCccccccCeEEecCCCccc-------------
Q 007935 427 IRNGSLYAALHG-------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI------------- 466 (584)
Q Consensus 427 ~~~GsL~~~L~~-------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~------------- 466 (584)
+++|+|.++++. . -|+++.+.|+.+..+..++..+++...
T Consensus 99 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 178 (291)
T 1xbb_A 99 AELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 178 (291)
T ss_dssp CTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC--
T ss_pred CCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCcccccc
Confidence 999999776642 2 367788888888777878887776432
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC-CCCccccChhhhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER-RPLSEVIDPALVKE 543 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~d~~~~~~ 543 (584)
..++..|+|||++.. ..++.++||||||+++|||+| |+.||.... ............ ...+..+++
T Consensus 179 ~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~----- 247 (291)
T 1xbb_A 179 HGKWPVKWYAPECINY-YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK-----GSEVTAMLEKGERMGCPAGCPR----- 247 (291)
T ss_dssp --CCCGGGCCHHHHHH-CEEEHHHHHHHHHHHHHHHHTTTCCSSTTCC-----HHHHHHHHHTTCCCCCCTTCCH-----
T ss_pred cCCCCceeeChHHhcc-CCCChhhhHHHHHHHHHHHHhcCCCCCCCCC-----HHHHHHHHHcCCCCCCCCCCCH-----
Confidence 235678999999654 578999999999999999999 999997532 222222222221 122222333
Q ss_pred hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 544 IHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 544 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.+.+++.+||+.||++|||+.|+++.|+++-
T Consensus 248 --------~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 278 (291)
T 1xbb_A 248 --------EMYDLMNLCWTYDVENRPGFAAVELRLRNYY 278 (291)
T ss_dssp --------HHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred --------HHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 3455777899999999999999999999874
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5e-29 Score=246.15 Aligned_cols=206 Identities=19% Similarity=0.282 Sum_probs=157.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|.....+ +.||+|++.... .....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 85 (284)
T 3kk8_A 11 KEELGKGAFSVVRRCVHKTTG-----LEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 85 (284)
T ss_dssp EEEEEEETTEEEEEEEETTTC-----CEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhhhcCcCCeEEEEEEEcCCC-----ceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 467999999999999987765 899999997652 33344778999999999999999999999999999999999
Q ss_pred cccCCcHHHHH-------------------------hccc--ccccCCCCccccccCe---EEecCCCcc----------
Q 007935 426 FIRNGSLYAAL-------------------------HGFG--LNRLLPGTSKVTKNET---IVTSGTGSR---------- 465 (584)
Q Consensus 426 y~~~GsL~~~L-------------------------~~~g--~~~~~~~~~~i~~~~~---~~~~~~~~~---------- 465 (584)
|+++|+|.+++ |+.| |+++.+.|+.+..+.. ++..++|..
T Consensus 86 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (284)
T 3kk8_A 86 LVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH 165 (284)
T ss_dssp CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCBCC
T ss_pred cCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCcccc
Confidence 99999996544 4333 5777777777755433 666777643
Q ss_pred cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCc----cccChhhh
Q 007935 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLS----EVIDPALV 541 (584)
Q Consensus 466 ~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~----~~~d~~~~ 541 (584)
...||+.|+|||++. +..++.++||||||+++|||++|+.||... ................+ ..+++
T Consensus 166 ~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~~l~~g~~pf~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~--- 236 (284)
T 3kk8_A 166 GFAGTPGYLSPEVLK-KDPYSKPVDIWACGVILYILLVGYPPFWDE-----DQHRLYAQIKAGAYDYPSPEWDTVTP--- 236 (284)
T ss_dssp CSCSCGGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHTCCCCCTTTTTTSCH---
T ss_pred CCCCCcCCcCchhhc-CCCCCcccchHHHHHHHHHHHHCCCCCCCC-----chhHHHHHHHhccccCCchhhcccCH---
Confidence 246899999999954 467899999999999999999999999742 22233333322222111 12222
Q ss_pred hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 542 KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 542 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||+.||++|||+.|+++
T Consensus 237 ----------~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 237 ----------EAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp ----------HHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ----------HHHHHHHHHcccChhhCCCHHHHhc
Confidence 3456777899999999999999985
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-29 Score=253.60 Aligned_cols=218 Identities=21% Similarity=0.295 Sum_probs=166.0
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
..+.||+|+||.||+|+..........+.||||.+.........+.|.+|++++++++||||+++++++.+.+..++|||
T Consensus 29 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 108 (322)
T 1p4o_A 29 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME 108 (322)
T ss_dssp EEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEEEEE
Confidence 35789999999999998763111111278999999876554555789999999999999999999999999999999999
Q ss_pred cccCCcHHHHHhc-----------------------------------c--cccccCCCCccccccCeEEecCCCccc--
Q 007935 426 FIRNGSLYAALHG-----------------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI-- 466 (584)
Q Consensus 426 y~~~GsL~~~L~~-----------------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~-- 466 (584)
|+++|+|.++++. . .|+++++.|+.+..+..++..++|...
T Consensus 109 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~~kl~Dfg~~~~~ 188 (322)
T 1p4o_A 109 LMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 188 (322)
T ss_dssp CCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGG
T ss_pred eCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCeEEECcCcccccc
Confidence 9999999877642 1 357777888888777788888877432
Q ss_pred -----------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCC-CCc
Q 007935 467 -----------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERR-PLS 533 (584)
Q Consensus 467 -----------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~ 533 (584)
..+|..|+|||++.. ..++.++|||||||++|||+| |+.||... .............. ...
T Consensus 189 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~-----~~~~~~~~~~~~~~~~~~ 262 (322)
T 1p4o_A 189 YETDYYRKGGKGLLPVRWMSPESLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGL-----SNEQVLRFVMEGGLLDKP 262 (322)
T ss_dssp GGGGCEEGGGSSEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHHTSCCTTTTS-----CHHHHHHHHHTTCCCCCC
T ss_pred ccccccccccCCCCCCCccChhhhcc-CCCCchhhHHHHHHHHHHHHhcCCCccccC-----CHHHHHHHHHcCCcCCCC
Confidence 235778999998554 678999999999999999999 89998742 22333333332221 122
Q ss_pred cccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 534 EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 534 ~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
..+++ .+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 263 ~~~~~-------------~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~ 298 (322)
T 1p4o_A 263 DNCPD-------------MLFELMRMCWQYNPKMRPSFLEIISSIKEEM 298 (322)
T ss_dssp TTCCH-------------HHHHHHHHHTCSSGGGSCCHHHHHHHHGGGS
T ss_pred CCCCH-------------HHHHHHHHHcCCCcccCcCHHHHHHHHHHhh
Confidence 22222 3455778899999999999999999998864
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-29 Score=264.58 Aligned_cols=211 Identities=19% Similarity=0.336 Sum_probs=149.4
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-------cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCc
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-------ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDE 419 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-------~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~ 419 (584)
.+.||+|+||.||+|....++ +.||||++.... .......+.+|+++|++++|||||++++++. .+.
T Consensus 140 ~~~LG~G~~g~V~~a~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~~ 213 (419)
T 3i6u_A 140 SKTLGSGACGEVKLAFERKTC-----KKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AED 213 (419)
T ss_dssp EEEEEECSSSEEEEEEETTTC-----CEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-SSE
T ss_pred EeEEeeCCCeEEEEEEECCCC-----cEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCc
Confidence 578999999999999988776 899999997532 1112246899999999999999999999975 456
Q ss_pred eeEeeecccCCcHHH-------------------------HHhccc--ccccCCCCccccccC---eEEecCCCcc----
Q 007935 420 KLLISDFIRNGSLYA-------------------------ALHGFG--LNRLLPGTSKVTKNE---TIVTSGTGSR---- 465 (584)
Q Consensus 420 ~~lV~Ey~~~GsL~~-------------------------~L~~~g--~~~~~~~~~~i~~~~---~~~~~~~~~~---- 465 (584)
.++||||+++|+|.+ |||+.| |+++++.|+.+..+. .++..|||..
T Consensus 214 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~ 293 (419)
T 3i6u_A 214 YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 293 (419)
T ss_dssp EEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC
T ss_pred eEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecccceecC
Confidence 899999999999954 445444 677888887775433 3777777643
Q ss_pred ------cccCCCcccCcccccc--CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccC
Q 007935 466 ------ISAISNVYLAPEARIY--GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVID 537 (584)
Q Consensus 466 ------~~~gt~~y~aPE~~~~--~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d 537 (584)
...||+.|+|||++.. ...++.++|||||||++|||+||+.||....... .+...+. ...... .
T Consensus 294 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~-~~~~~i~---~~~~~~----~ 365 (419)
T 3i6u_A 294 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-SLKDQIT---SGKYNF----I 365 (419)
T ss_dssp -----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC-CHHHHHH---TTCCCC----C
T ss_pred CCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH-HHHHHHh---cCCCCC----C
Confidence 2368999999998642 3568889999999999999999999997543322 2222221 111111 1
Q ss_pred hhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 538 PALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+..... ....+.+++.+||+.||++|||+.|+++
T Consensus 366 ~~~~~~-----~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 366 PEVWAE-----VSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp HHHHTT-----SCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred chhhcc-----cCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 111111 1124567888899999999999999986
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.8e-30 Score=264.62 Aligned_cols=158 Identities=26% Similarity=0.375 Sum_probs=123.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC-CcchhhHhHHHHHHHHHhcC-CCceeeeeEEEEeCC--ceeE
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARVQ-HPNIVRLKAFYYAND--EKLL 422 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~f~~Ei~~l~~l~-HpnIV~l~g~~~~~~--~~~l 422 (584)
.+.||+|+||.||+|....++ +.||||++... ......+.+.+|+.++.+++ |||||++++++...+ ..|+
T Consensus 14 ~~~lG~G~~g~V~~~~~~~~~-----~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~l 88 (388)
T 3oz6_A 14 VKKLGKGAYGIVWKSIDRRTG-----EVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYL 88 (388)
T ss_dssp EEC-------CEEEEEETTTC-----CEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEE
T ss_pred EEEeeeCCCeEEEEEEECCCC-----CEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEE
Confidence 467999999999999987766 89999999754 23334577889999999997 999999999998654 6899
Q ss_pred eeecccCCcHHHH------------------------Hhccc--ccccCCCCccccccCeEEecCCCccc----------
Q 007935 423 ISDFIRNGSLYAA------------------------LHGFG--LNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 423 V~Ey~~~GsL~~~------------------------L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
|||||+ |+|.++ ||+.| |++++++|+.+..+..++..|||...
T Consensus 89 v~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 167 (388)
T 3oz6_A 89 VFDYME-TDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTN 167 (388)
T ss_dssp EEECCS-EEHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCCC
T ss_pred EecccC-cCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCcccccccccccccc
Confidence 999998 587544 44443 68888899888888888888887432
Q ss_pred ----------------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCC
Q 007935 467 ----------------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAG 510 (584)
Q Consensus 467 ----------------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~ 510 (584)
..||+.|+|||++.....++.++||||+||++|||++|+.||.+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 233 (388)
T 3oz6_A 168 NIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPG 233 (388)
T ss_dssp CGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCC
Confidence 26899999999866546799999999999999999999999975
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-29 Score=250.25 Aligned_cols=222 Identities=18% Similarity=0.253 Sum_probs=156.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc-chhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~-~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|+...+ +.||||++..... ....+.+.+|++++++++|||||++++++.+.+..++|||
T Consensus 7 ~~~lg~G~~g~V~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (288)
T 1ob3_A 7 LEKIGEGTYGVVYKAQNNYG------ETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFE 80 (288)
T ss_dssp EEEEEEETTEEEEEEEETTS------CEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred hhhcccCCCEEEEEEEcCCC------CEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEE
Confidence 45799999999999998544 7999999976532 2234778999999999999999999999999999999999
Q ss_pred cccCCcHHHHH--------------------------hccc--ccccCCCCccccccCeEEecCCCccc-----------
Q 007935 426 FIRNGSLYAAL--------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSRI----------- 466 (584)
Q Consensus 426 y~~~GsL~~~L--------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~----------- 466 (584)
|+++ +|.+++ |+.| |++++++|+.+..++.++..++|...
T Consensus 81 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 159 (288)
T 1ob3_A 81 HLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH 159 (288)
T ss_dssp CCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-------
T ss_pred ecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCcccccccc
Confidence 9985 775444 4433 67788888888888888888887432
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcC-CCCc-----cccChhh
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER-RPLS-----EVIDPAL 540 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~-----~~~d~~~ 540 (584)
..||+.|+|||++.....++.++|||||||++|||+||+.||.+.... ..+....+...... ...+ ..+++..
T Consensus 160 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T 1ob3_A 160 EIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA-DQLMRIFRILGTPNSKNWPNVTELPKYDPNF 238 (288)
T ss_dssp --CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCTTTSTTGGGSTTCCTTC
T ss_pred ccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHHCCCChhhchhhhccccccccc
Confidence 357899999998655456899999999999999999999999753211 11111111110000 0000 0001100
Q ss_pred hh------hhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 541 VK------EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 541 ~~------~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.. ..........+.+++.+||+.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00 0000001234567888999999999999999975
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-29 Score=265.67 Aligned_cols=219 Identities=18% Similarity=0.244 Sum_probs=158.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC-CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCC------c
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARVQHPNIVRLKAFYYAND------E 419 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~------~ 419 (584)
.+.||+|+||+||+|+....+ +.||||++... ......+++.+|+.++++++|||||++++++...+ .
T Consensus 67 ~~~lG~G~~g~V~~a~~~~~~-----~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~ 141 (464)
T 3ttj_A 67 LKPIGSGAQGIVCAAYDAVLD-----RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD 141 (464)
T ss_dssp EEEEEECSSCEEEEEEETTTT-----EEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred EEEeecCCCeEEEEEEECCCC-----CEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCe
Confidence 467999999999999988765 89999999764 23334578999999999999999999999997653 4
Q ss_pred eeEeeecccCCcH----------------------HHHHhccc--ccccCCCCccccccCeEEecCCCcc----------
Q 007935 420 KLLISDFIRNGSL----------------------YAALHGFG--LNRLLPGTSKVTKNETIVTSGTGSR---------- 465 (584)
Q Consensus 420 ~~lV~Ey~~~GsL----------------------~~~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~---------- 465 (584)
.|+|||||+++.+ .+|||..| |++++++|+.+..+..++..|||..
T Consensus 142 ~~lv~E~~~~~l~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 221 (464)
T 3ttj_A 142 VYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMT 221 (464)
T ss_dssp EEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC-----CCCC-
T ss_pred EEEEEeCCCCCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCCCcccC
Confidence 6999999987533 24556554 6888899998888888888888743
Q ss_pred cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhc-CCCC------------
Q 007935 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE-RRPL------------ 532 (584)
Q Consensus 466 ~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~-~~~~------------ 532 (584)
...||+.|+|||++.. ..|+.++||||+||++|||++|+.||.+.. ..+........ ..+.
T Consensus 222 ~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pF~g~~-----~~~~~~~i~~~lg~p~~~~~~~~~~~~~ 295 (464)
T 3ttj_A 222 PYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRD-----YIDQWNKVIEQLGTPCPEFMKKLQPTVR 295 (464)
T ss_dssp ---CCCTTCCHHHHTT-CCCCTTHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHHHCSCCHHHHTTSCHHHH
T ss_pred CCcccccccCHHHHcC-CCCCHHHHHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHHhcCCCCHHHHHHcchhhh
Confidence 2468999999999654 689999999999999999999999997532 11111111110 0000
Q ss_pred --------------ccccChhhhh--hhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 533 --------------SEVIDPALVK--EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 533 --------------~~~~d~~~~~--~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+..+...+.. ..........+.+++.+||+.||++|||+.|+++
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 296 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp HHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred hHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000000000 0001122456789999999999999999999985
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.7e-29 Score=250.42 Aligned_cols=221 Identities=22% Similarity=0.284 Sum_probs=159.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC--CceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN--DEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~--~~~~lV~ 424 (584)
.+.||+|+||.||+|++.... ....+.||||+++........+.+.+|++++++++||||+++++++.+. +..++||
T Consensus 26 ~~~lg~G~~g~V~~~~~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~ 104 (302)
T 4e5w_A 26 IRDLGEGHFGKVELCRYDPEG-DNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIM 104 (302)
T ss_dssp EEEEEECSSEEEEEEEECTTS-SSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEE
T ss_pred hhccCCCCceEEEEEEEcccc-CccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEE
Confidence 468999999999999853211 1122899999998664444557899999999999999999999999886 6689999
Q ss_pred ecccCCcHHHHHh--------------------------cc--cccccCCCCccccccCeEEecCCCccc----------
Q 007935 425 DFIRNGSLYAALH--------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 425 Ey~~~GsL~~~L~--------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
||+++|+|.++++ +. .|+++++.|+.+..++.++..++|...
T Consensus 105 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 184 (302)
T 4e5w_A 105 EFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYT 184 (302)
T ss_dssp ECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCCEEE
T ss_pred EeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECcccccccccCCCccee
Confidence 9999999987763 22 367888888888778888888876432
Q ss_pred ----ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCC----------CCCCcHHHHHHHHhhcC-CC
Q 007935 467 ----SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPE----------NDGKGLESLVRKAFRER-RP 531 (584)
Q Consensus 467 ----~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~----------~~~~~l~~~~~~~~~~~-~~ 531 (584)
..||..|+|||++.. ..++.++||||||+++|||+||+.|+.... ........+........ .+
T Consensus 185 ~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (302)
T 4e5w_A 185 VKDDRDSPVFWYAPECLMQ-SKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLP 263 (302)
T ss_dssp CCCCTTCCGGGCCHHHHHH-CEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCCCC
T ss_pred ccCCCCCCccccCCeeecC-CCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccCCCC
Confidence 246777999998554 678899999999999999999999864210 00111111111111111 11
Q ss_pred CccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 532 ~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.+..++ ..+.+++.+||+.||.+|||+.|++++|+++.
T Consensus 264 ~~~~~~-------------~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 264 CPPNCP-------------DEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp CCTTCC-------------HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCC-------------HHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 112222 24556888899999999999999999999874
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=99.96 E-value=3.2e-29 Score=267.06 Aligned_cols=205 Identities=17% Similarity=0.244 Sum_probs=162.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.++||+|+||.||+|+...++ +.||||++.... .....+.+.+|++++++++|||||++++++.+.+..|+||
T Consensus 190 ~~~LG~G~fG~Vy~a~~~~tg-----~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 190 FRVLGRGGFGEVFACQMKATG-----KLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp EEEEEECSSSEEEEEEETTTC-----CEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred EEEEeeCCCeEEEEEEECCCC-----cEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 367999999999999997765 899999997642 2223467899999999999999999999999999999999
Q ss_pred ecccCCcHHHHHhc-----------------------------c--cccccCCCCccccccCeEEecCCCcc--------
Q 007935 425 DFIRNGSLYAALHG-----------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSR-------- 465 (584)
Q Consensus 425 Ey~~~GsL~~~L~~-----------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~-------- 465 (584)
||+++|+|.+++.. . .|++++++|+.+..++.++..++|..
T Consensus 265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~ 344 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344 (543)
T ss_dssp CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeeccCCCc
Confidence 99999999776642 2 36888889988888888888887643
Q ss_pred ---cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhh
Q 007935 466 ---ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVK 542 (584)
Q Consensus 466 ---~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~ 542 (584)
...||+.|||||++. +..++.++|||||||++|||+||+.||..... ......+..........++..+++.+.
T Consensus 345 ~~~~~~GT~~Y~APE~l~-~~~~~~~~DiwSlGvilyelltG~~PF~~~~~-~~~~~~~~~~i~~~~~~~p~~~s~~~~- 421 (543)
T 3c4z_A 345 KTKGYAGTPGFMAPELLL-GEEYDFSVDYFALGVTLYEMIAARGPFRARGE-KVENKELKQRVLEQAVTYPDKFSPASK- 421 (543)
T ss_dssp CBCCCCSCTTTSCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTC-CCCHHHHHHHHHHCCCCCCTTSCHHHH-
T ss_pred ccccccCCccccChhhhc-CCCCChHHhcCcchHHHHHHHhCCCCCCCCcc-chhHHHHHHHHhhcccCCCcccCHHHH-
Confidence 137999999999955 46899999999999999999999999986432 223444555555554444555555443
Q ss_pred hhhHHHHHHHHHHHHhcccCCCCCCCCCh
Q 007935 543 EIHAKRQVLATFHIALNCTELDPEFRPRM 571 (584)
Q Consensus 543 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~ 571 (584)
+++.+||+.||++||++
T Consensus 422 ------------~li~~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 422 ------------DFCEALLQKDPEKRLGF 438 (543)
T ss_dssp ------------HHHHHHSCSSGGGSCCC
T ss_pred ------------HHHHHhccCCHhHCCCC
Confidence 46666999999999976
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=99.96 E-value=3.6e-29 Score=259.17 Aligned_cols=206 Identities=20% Similarity=0.302 Sum_probs=150.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEe----CCcee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYA----NDEKL 421 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~----~~~~~ 421 (584)
.++||+|+||+||++....++ +.||||+++.. ..+.+|++++.++ +|||||++++++.. .+..+
T Consensus 67 ~~~LG~G~~g~V~~~~~~~~~-----~~vAiK~~~~~------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~ 135 (400)
T 1nxk_A 67 SQVLGLGINGKVLQIFNKRTQ-----EKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 135 (400)
T ss_dssp EEEEEEETTEEEEEEEETTTC-----CEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cceeeeccCeEEEEEEECCCC-----CEEEEEEeCcc------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence 357999999999999988765 89999999642 5678899987554 89999999999876 56789
Q ss_pred EeeecccCCcHHHHHhc---------------------------c--cccccCCCCccccc---cCeEEecCCCcc----
Q 007935 422 LISDFIRNGSLYAALHG---------------------------F--GLNRLLPGTSKVTK---NETIVTSGTGSR---- 465 (584)
Q Consensus 422 lV~Ey~~~GsL~~~L~~---------------------------~--g~~~~~~~~~~i~~---~~~~~~~~~~~~---- 465 (584)
+|||||++|+|.++++. . .|++++++|+.+.. +..++..|||..
T Consensus 136 lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~ 215 (400)
T 1nxk_A 136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 215 (400)
T ss_dssp EEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred EEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccccccC
Confidence 99999999999777643 2 36778888887766 566777887743
Q ss_pred ------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCC--cHHHHHHHHhhcCCCCccccC
Q 007935 466 ------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGK--GLESLVRKAFRERRPLSEVID 537 (584)
Q Consensus 466 ------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~--~l~~~~~~~~~~~~~~~~~~d 537 (584)
...||+.|+|||++. +..++.++|||||||++|||++|+.||........ .....+. .....++....
T Consensus 216 ~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~---~~~~~~~~~~~ 291 (400)
T 1nxk_A 216 SHNSLTTPCYTPYYVAPEVLG-PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR---MGQYEFPNPEW 291 (400)
T ss_dssp -----------CTTCCGGGSC-CCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHH---HTCCCCCTTTT
T ss_pred CCCccccCCCCCCccCHhhcC-CCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHH---cCcccCCCccc
Confidence 236799999999954 46899999999999999999999999976443221 1222211 11111111000
Q ss_pred hhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 538 PALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
..+ ...+.+++.+||+.||++|||+.|+++
T Consensus 292 ~~~---------s~~~~~li~~~L~~dP~~Rpt~~eil~ 321 (400)
T 1nxk_A 292 SEV---------SEEVKMLIRNLLKTEPTQRMTITEFMN 321 (400)
T ss_dssp TTS---------CHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ccC---------CHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 011 123456888899999999999999986
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-29 Score=253.90 Aligned_cols=216 Identities=20% Similarity=0.256 Sum_probs=159.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEe----CCceeE
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYA----NDEKLL 422 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~----~~~~~l 422 (584)
.+.||+|+||.||+++....+ +.||||++... .....+.+.+|++++++++|||||++++++.. .+..++
T Consensus 34 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 34 IQKLGEGGFSYVDLVEGLHDG-----HFYALKRILCH-EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp EEEEEC--CEEEEEEEETTTC-----CEEEEEEEEES-SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred EEEecCCCCeEEEEEEecCCC-----cEEEEEEEecC-CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 467999999999999986655 89999998764 33345789999999999999999999999973 346899
Q ss_pred eeecccCCcHHHHHhc-----------------------------c--cccccCCCCccccccCeEEecCCCccc-----
Q 007935 423 ISDFIRNGSLYAALHG-----------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI----- 466 (584)
Q Consensus 423 V~Ey~~~GsL~~~L~~-----------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~----- 466 (584)
||||+++|+|.++++. . -|+++.+.|+.+..++.++..+++...
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~ 187 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIH 187 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSCEESCEE
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcchhcccc
Confidence 9999999999776643 2 357788888888777788888887421
Q ss_pred ---------------ccCCCcccCccccccC--CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcC
Q 007935 467 ---------------SAISNVYLAPEARIYG--SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER 529 (584)
Q Consensus 467 ---------------~~gt~~y~aPE~~~~~--~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~ 529 (584)
..||..|+|||++... ..++.++|||||||++|||++|+.||................ ...
T Consensus 188 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~--~~~ 265 (317)
T 2buj_A 188 VEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQN--QLS 265 (317)
T ss_dssp EESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHC--C--
T ss_pred cccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhc--cCC
Confidence 2468999999985432 136899999999999999999999986421112222222111 111
Q ss_pred CCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 530 RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 530 ~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
.+....+++ .+.+++.+||+.||.+|||+.|+++.|++++.
T Consensus 266 ~~~~~~~~~-------------~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~ 306 (317)
T 2buj_A 266 IPQSPRHSS-------------ALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP 306 (317)
T ss_dssp CCCCTTSCH-------------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred CCccccCCH-------------HHHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence 111122222 34567788999999999999999999998864
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.3e-29 Score=268.71 Aligned_cols=210 Identities=20% Similarity=0.192 Sum_probs=164.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.++||+|+||.||+|+...++ +.||||++.... .....+.+.+|+++|++++|||||++++++.+.+..++||
T Consensus 189 ~~~LG~G~fG~Vy~a~~~~tg-----~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 263 (576)
T 2acx_A 189 YRVLGKGGFGEVCACQVRATG-----KMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVL 263 (576)
T ss_dssp EEEEEEETTEEEEEEEETTTC-----CEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred EEEEeeCCCEEEEEEEECCCC-----CEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEE
Confidence 468999999999999998765 899999997541 2223467899999999999999999999999999999999
Q ss_pred ecccCCcHHHHHh---------------------------cc--cccccCCCCccccccCeEEecCCCcc----------
Q 007935 425 DFIRNGSLYAALH---------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR---------- 465 (584)
Q Consensus 425 Ey~~~GsL~~~L~---------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~---------- 465 (584)
||+++|+|.+++. .. .|++++++|+.+..++.++..|+|..
T Consensus 264 Ey~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~~~ 343 (576)
T 2acx_A 264 TLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIK 343 (576)
T ss_dssp CCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCEE
T ss_pred EcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceecccCcccc
Confidence 9999999976653 22 36888889988888888888888743
Q ss_pred cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhh
Q 007935 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIH 545 (584)
Q Consensus 466 ~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~ 545 (584)
...||+.|+|||++.. ..++.++|||||||++|||++|+.||...... .....+..........++..+++.+
T Consensus 344 ~~~GT~~Y~APEvl~~-~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~-~~~~~i~~~i~~~~~~~p~~~s~~~----- 416 (576)
T 2acx_A 344 GRVGTVGYMAPEVVKN-ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK-IKREEVERLVKEVPEEYSERFSPQA----- 416 (576)
T ss_dssp CCCSCGGGCCHHHHTT-CEESSHHHHHHHHHHHHHHHHSSCSSSCSSSC-CCHHHHHHHHHHCCCCCCTTSCHHH-----
T ss_pred ccCCCccccCHHHHcC-CCCCccchHHHHHHHHHHHHhCCCCCcccccc-hhHHHHHHHhhcccccCCccCCHHH-----
Confidence 2478999999999554 67999999999999999999999999864322 2233333443333333444455544
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCC-----ChHHHHH
Q 007935 546 AKRQVLATFHIALNCTELDPEFRP-----RMRTVSE 576 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RP-----t~~ev~~ 576 (584)
.+++.+||+.||.+|| ++.||++
T Consensus 417 --------~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 417 --------RSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp --------HHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred --------HHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 3466669999999999 6788764
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.2e-29 Score=249.45 Aligned_cols=223 Identities=19% Similarity=0.299 Sum_probs=157.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc-chhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~-~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|+...++ +.||||++..... ....+.+.+|++++++++|||||++++++.+.+..++|||
T Consensus 8 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 8 IGKIGEGSYGVVFKCRNRDTG-----QIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp EEEEEECSSEEEEEEEETTTC-----CEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEEeecCCeEEEEEEeCCCC-----cEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 467999999999999998765 8999999876533 2334678899999999999999999999999999999999
Q ss_pred cccCCcHHHH-------------------------Hhccc--ccccCCCCccccccCeEEecCCCccc-----------c
Q 007935 426 FIRNGSLYAA-------------------------LHGFG--LNRLLPGTSKVTKNETIVTSGTGSRI-----------S 467 (584)
Q Consensus 426 y~~~GsL~~~-------------------------L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~-----------~ 467 (584)
|+++++|.++ ||+.| |+++.+.|+.+..++.++..++|... .
T Consensus 83 ~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 162 (311)
T 4agu_A 83 YCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDE 162 (311)
T ss_dssp CCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC---------
T ss_pred eCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccccCCC
Confidence 9999988544 34444 67788888888777888888876432 3
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC-----------C--cc
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP-----------L--SE 534 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~-----------~--~~ 534 (584)
.||..|+|||++.....++.++|||||||++|||+||+.||.+.... .....+........+ . ..
T Consensus 163 ~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (311)
T 4agu_A 163 VATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDV--DQLYLIRKTLGDLIPRHQQVFSTNQYFSGVK 240 (311)
T ss_dssp ---GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCSCCHHHHHHHHTCGGGTTCC
T ss_pred cCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhcccccccccccccccccccCc
Confidence 67889999998665467899999999999999999999999753221 111111111110000 0 00
Q ss_pred ccChhhhhhh--hHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 535 VIDPALVKEI--HAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 535 ~~d~~~~~~~--~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
..++.-.... ........+.+++.+||+.||++|||++|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 241 IPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp CCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred CCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 0000000000 00012235678999999999999999999985
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.2e-29 Score=248.44 Aligned_cols=214 Identities=14% Similarity=0.167 Sum_probs=160.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|.....+ +.||||++..... .+.+.+|+.++.++ +|+|++++++++.+.+..++|||
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~---~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 15 GRRIGEGSFGVIFEGTNLLNN-----QQVAIKFEPRRSD---APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp EEEEEECSSCEEEEEEETTTT-----EEEEEEEEECCTT---SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred EEEEeecCCEEEEEEEECCCC-----cEEEEEEeccCCc---cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 467999999999999986655 8999999875432 26789999999999 89999999999999999999999
Q ss_pred cccCCcHHHHHhc--------------------------c--cccccCCCCccccccCe-----EEecCCCcc-------
Q 007935 426 FIRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNET-----IVTSGTGSR------- 465 (584)
Q Consensus 426 y~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~-----~~~~~~~~~------- 465 (584)
|+ +|+|.++++. . -|+++++.|+.+..++. ++..++|..
T Consensus 87 ~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~ 165 (298)
T 1csn_A 87 LL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPV 165 (298)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTT
T ss_pred ec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccccccc
Confidence 99 9999777652 2 35777788877765543 777777632
Q ss_pred -----------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcC--CCC
Q 007935 466 -----------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER--RPL 532 (584)
Q Consensus 466 -----------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~--~~~ 532 (584)
...||+.|+|||++. +..++.++|||||||++|||+||+.||...... ............. .+.
T Consensus 166 ~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~ 242 (298)
T 1csn_A 166 TKQHIPYREKKNLSGTARYMSINTHL-GREQSRRDDLEALGHVFMYFLRGSLPWQGLKAA--TNKQKYERIGEKKQSTPL 242 (298)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSC--CHHHHHHHHHHHHHHSCH
T ss_pred ccccccccCccCCCCCcccCCchhhc-CCCCChHHHHHHHHHHHHHHHcCCCCcchhhcc--ccHHHHHHHHhhccCccH
Confidence 235889999999954 467899999999999999999999999864322 1122221111110 110
Q ss_pred ccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 533 SEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 533 ~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.. ..+. ....+.+++.+||+.||++|||+.+|++.|+++.
T Consensus 243 ~~-~~~~---------~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~ 282 (298)
T 1csn_A 243 RE-LCAG---------FPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVL 282 (298)
T ss_dssp HH-HTTT---------SCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred HH-HHhh---------CcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHH
Confidence 00 0111 1124566888899999999999999999999874
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=99.96 E-value=9.5e-29 Score=244.98 Aligned_cols=206 Identities=21% Similarity=0.330 Sum_probs=156.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEe----CCcee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYA----NDEKL 421 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~----~~~~~ 421 (584)
.+.||+|+||.||+|....++ ..||+|.+.... .....+.|.+|+.++++++|||||++++++.. .+..+
T Consensus 31 ~~~lg~G~~g~Vy~~~~~~~~-----~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (290)
T 1t4h_A 31 DIEIGRGSFKTVYKGLDTETT-----VEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTC-----CEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred eeeccCCCCeEEEEeEecCCc-----eEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence 457999999999999987765 899999997652 33345789999999999999999999999876 34589
Q ss_pred EeeecccCCcHHHHH-------------------------hccc----ccccCCCCcccc-ccCeEEecCCCcc------
Q 007935 422 LISDFIRNGSLYAAL-------------------------HGFG----LNRLLPGTSKVT-KNETIVTSGTGSR------ 465 (584)
Q Consensus 422 lV~Ey~~~GsL~~~L-------------------------~~~g----~~~~~~~~~~i~-~~~~~~~~~~~~~------ 465 (584)
+||||+++|+|.+++ |..| |+++.+.|+.+. .+..++..+++..
T Consensus 106 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~ 185 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS 185 (290)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT
T ss_pred EEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCccccccc
Confidence 999999999996655 4333 566777777775 5567777777643
Q ss_pred ---cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC--CccccChhh
Q 007935 466 ---ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP--LSEVIDPAL 540 (584)
Q Consensus 466 ---~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~d~~~ 540 (584)
...||+.|+|||++ . ..++.++|||||||++|||+||+.||.... ..............+ .....++
T Consensus 186 ~~~~~~~t~~y~aPE~~-~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~----~~~~~~~~~~~~~~~~~~~~~~~~-- 257 (290)
T 1t4h_A 186 FAKAVIGTPEFMAPEMY-E-EKYDESVDVYAFGMCMLEMATSEYPYSECQ----NAAQIYRRVTSGVKPASFDKVAIP-- 257 (290)
T ss_dssp SBEESCSSCCCCCGGGG-G-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCS----SHHHHHHHHTTTCCCGGGGGCCCH--
T ss_pred ccccccCCcCcCCHHHH-h-ccCCCcchHHHHHHHHHHHHhCCCCCCCcC----cHHHHHHHHhccCCccccCCCCCH--
Confidence 24689999999984 4 368999999999999999999999997522 233333333322211 1111222
Q ss_pred hhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 541 VKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 541 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||+.||++|||+.|+++
T Consensus 258 -----------~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 258 -----------EVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp -----------HHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -----------HHHHHHHHHccCChhhCCCHHHHhh
Confidence 3556888899999999999999985
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=9.3e-29 Score=243.30 Aligned_cols=208 Identities=17% Similarity=0.238 Sum_probs=157.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|.....+ ..||+|++..... ...+.|.+|++++++++||||+++++++.+.+..++||||
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~-----~~~a~k~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 14 ENTIGRGSWGEVKIAVQKGTR-----IRRAAKKIPKYFV-EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp EEEEEEETTEEEEEEEETTTC-----CEEEEEEEEGGGC-SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred eeEEeecCCEEEEEEEeCCCC-----cEEEEEeehhhcc-chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 467999999999999988765 7999999976432 2347899999999999999999999999999999999999
Q ss_pred ccCCcHHHHH-------------------------hccc--ccccCCCCccc---cccCeEEecCCCcc----------c
Q 007935 427 IRNGSLYAAL-------------------------HGFG--LNRLLPGTSKV---TKNETIVTSGTGSR----------I 466 (584)
Q Consensus 427 ~~~GsL~~~L-------------------------~~~g--~~~~~~~~~~i---~~~~~~~~~~~~~~----------~ 466 (584)
+++|+|.+++ |+.| |+++.+.|+.+ ..+..++..+++.. .
T Consensus 88 ~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~ 167 (277)
T 3f3z_A 88 CTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRT 167 (277)
T ss_dssp CCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCBCC
T ss_pred cCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccchhc
Confidence 9999996554 3333 57777788777 44566777777643 2
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhH
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 546 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 546 (584)
..||+.|+|||++ . ..++.++||||||+++|||+||+.||.... ...............+.. ....
T Consensus 168 ~~~t~~y~aPE~~-~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~----~~~~--- 233 (277)
T 3f3z_A 168 KVGTPYYVSPQVL-E-GLYGPECDEWSAGVMMYVLLCGYPPFSAPT-----DSEVMLKIREGTFTFPEK----DWLN--- 233 (277)
T ss_dssp CCSCTTTCCHHHH-T-TCBCTTHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCCCCCCHH----HHTT---
T ss_pred cCCCCCccChHHh-c-ccCCchhhehhHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHhCCCCCCch----hhhc---
Confidence 3689999999984 4 358999999999999999999999997522 223333333332222211 0000
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 547 KRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 547 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
....+.+++.+||+.||++|||+.|+++
T Consensus 234 --~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 234 --VSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp --SCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred --CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1124556788899999999999999984
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=99.96 E-value=9.6e-29 Score=246.70 Aligned_cols=209 Identities=18% Similarity=0.244 Sum_probs=155.4
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+++....+ +.||||.++.... ...+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 14 MEVLGSGAFSEVFLVKQRLTG-----KLFALKCIKKSPA-FRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp EEEEEECSSEEEEEEEETTTC-----CEEEEEEEECC-------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred eeeccCCCCceEEEEEECCCC-----CEEEEEEEecccc-cchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 468999999999999987655 8999999986432 2236789999999999999999999999999999999999
Q ss_pred ccCCcHHHHHh-------------------------cc--cccccCCCCccc---cccCeEEecCCCccc---------c
Q 007935 427 IRNGSLYAALH-------------------------GF--GLNRLLPGTSKV---TKNETIVTSGTGSRI---------S 467 (584)
Q Consensus 427 ~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i---~~~~~~~~~~~~~~~---------~ 467 (584)
+++|+|.+++. .. -|.++.+.|+.+ ..+..++..+++... .
T Consensus 88 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~ 167 (304)
T 2jam_A 88 VSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTA 167 (304)
T ss_dssp CCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTTHHH
T ss_pred CCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCccccc
Confidence 99999976653 33 356777777776 345667777776432 3
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHH
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAK 547 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 547 (584)
.||+.|+|||++. +..++.++|||||||++|||++|+.||... .....................+.+
T Consensus 168 ~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~-----~~~~~~~~i~~~~~~~~~~~~~~~------- 234 (304)
T 2jam_A 168 CGTPGYVAPEVLA-QKPYSKAVDCWSIGVITYILLCGYPPFYEE-----TESKLFEKIKEGYYEFESPFWDDI------- 234 (304)
T ss_dssp HSCCCBCCTTTBS-SCSCCHHHHHHHHHHHHHHHHHSSCTTTTS-----CHHHHHHHHHHCCCCCCTTTTTTS-------
T ss_pred cCCCCccChHHhc-cCCCCchhhHHHHHHHHHHHHHCCCCCCCC-----CHHHHHHHHHcCCCCCCccccccC-------
Confidence 5899999999954 468899999999999999999999999742 222333333332222111111111
Q ss_pred HHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 548 RQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 548 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
...+.+++.+||+.||++|||+.|+++
T Consensus 235 --~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 235 --SESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp --CHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred --CHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 123456788899999999999999985
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5.1e-29 Score=265.72 Aligned_cols=209 Identities=21% Similarity=0.326 Sum_probs=153.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|+...++ ..||||++.... .....+.+.+|+.++++++|||||+++++|.+.+..++|||
T Consensus 42 ~~~lG~G~~g~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 116 (494)
T 3lij_A 42 VKKLGSGAYGEVLLCRDKVTH-----VERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME 116 (494)
T ss_dssp EEEEECC---EEEEEEETTTC-----CEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred eeEEecCCCEEEEEEEECCCC-----cEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 468999999999999988765 799999997652 22334789999999999999999999999999999999999
Q ss_pred cccCCcHHHHH-------------------------hccc--ccccCCCCcccccc---CeEEecCCCcc----------
Q 007935 426 FIRNGSLYAAL-------------------------HGFG--LNRLLPGTSKVTKN---ETIVTSGTGSR---------- 465 (584)
Q Consensus 426 y~~~GsL~~~L-------------------------~~~g--~~~~~~~~~~i~~~---~~~~~~~~~~~---------- 465 (584)
|+++|+|.+++ |..| |+++++.|+.+... ..++..++|..
T Consensus 117 ~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~~~ 196 (494)
T 3lij_A 117 CYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMK 196 (494)
T ss_dssp CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBCBC
T ss_pred cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCcccc
Confidence 99999996554 4333 67788888777543 33677777642
Q ss_pred cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhh
Q 007935 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIH 545 (584)
Q Consensus 466 ~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~ 545 (584)
...||+.|+|||++ . ..++.++||||+||++|||++|+.||.+. ...............+.. +.. ..+
T Consensus 197 ~~~gt~~y~aPE~l-~-~~~~~~~DiwslG~il~~ll~g~~pf~~~-----~~~~~~~~i~~~~~~~~~---~~~-~~~- 264 (494)
T 3lij_A 197 ERLGTAYYIAPEVL-R-KKYDEKCDVWSIGVILFILLAGYPPFGGQ-----TDQEILRKVEKGKYTFDS---PEW-KNV- 264 (494)
T ss_dssp CCCSCTTTCCHHHH-T-TCBCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHTCCCCCS---GGG-TTS-
T ss_pred ccCCCcCeeCHHHH-c-ccCCCchhHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHhCCCCCCc---hhc-ccC-
Confidence 23689999999985 4 46999999999999999999999999752 233344444333322111 111 001
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 546 AKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
...+.+++.+||+.||.+|||+.|+++
T Consensus 265 ----s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 265 ----SEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp ----CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ----CHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 113456788899999999999999984
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.7e-29 Score=247.27 Aligned_cols=206 Identities=17% Similarity=0.300 Sum_probs=160.1
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|+....+ +.||||.+.........+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 101 (303)
T 3a7i_A 27 LEKIGKGSFGEVFKGIDNRTQ-----KVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 101 (303)
T ss_dssp EEEEEECSSSEEEEEEETTTC-----CEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhhhcccCCeEEEEEEECCCC-----cEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence 467999999999999987655 899999998765445568899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHh------------------------cc--cccccCCCCccccccCeEEecCCCcc-----------cccC
Q 007935 427 IRNGSLYAALH------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR-----------ISAI 469 (584)
Q Consensus 427 ~~~GsL~~~L~------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~~g 469 (584)
+++|+|.+++. .. -|.++.+.|+.+..++.++..+++.. ...|
T Consensus 102 ~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 181 (303)
T 3a7i_A 102 LGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVG 181 (303)
T ss_dssp CTTEEHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBCCCCS
T ss_pred CCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCccccccCccCC
Confidence 99999976653 33 35677778887777777777777643 2357
Q ss_pred CCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcC-CCCccccChhhhhhhhHHH
Q 007935 470 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER-RPLSEVIDPALVKEIHAKR 548 (584)
Q Consensus 470 t~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~ 548 (584)
|..|+|||++.. ..++.++||||||+++|||++|+.||.... ............ ..+...+++
T Consensus 182 ~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~---------- 245 (303)
T 3a7i_A 182 TPFWMAPEVIKQ-SAYDSKADIWSLGITAIELARGEPPHSELH-----PMKVLFLIPKNNPPTLEGNYSK---------- 245 (303)
T ss_dssp CGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-----HHHHHHHHHHSCCCCCCSSCCH----------
T ss_pred CcCccCHHHHhc-CCCCchhhhHHHHHHHHHHccCCCCCCCcC-----HHHHHHHhhcCCCCCCccccCH----------
Confidence 889999999544 688999999999999999999999997422 122222222211 112223333
Q ss_pred HHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 549 QVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 549 ~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||+.||++|||+.|+++
T Consensus 246 ---~l~~li~~~l~~dp~~Rps~~~ll~ 270 (303)
T 3a7i_A 246 ---PLKEFVEACLNKEPSFRPTAKELLK 270 (303)
T ss_dssp ---HHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred ---HHHHHHHHHcCCChhhCcCHHHHhh
Confidence 3445777799999999999999986
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=5.6e-29 Score=245.85 Aligned_cols=206 Identities=19% Similarity=0.279 Sum_probs=160.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|+...++ ..||||.+.... .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 19 ~~~lg~G~~g~Vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 19 GRPLGKGKFGNVYLAREKQNK-----FIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp EEEEEECSSEEEEEEEETTTT-----EEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eheecCCCCeEEEEEEEcCCC-----cEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 468999999999999987765 899999996541 1222367999999999999999999999999999999999
Q ss_pred ecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCcc---------ccc
Q 007935 425 DFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR---------ISA 468 (584)
Q Consensus 425 Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~---------~~~ 468 (584)
||+++|+|.+++. +. .|+++.+.|+.+..++.++..+++.. ...
T Consensus 94 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 173 (284)
T 2vgo_A 94 EFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRTMC 173 (284)
T ss_dssp CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSCBCCCC
T ss_pred EeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccCccccccccc
Confidence 9999999976653 33 35677778887777777888777632 246
Q ss_pred CCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHH
Q 007935 469 ISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKR 548 (584)
Q Consensus 469 gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 548 (584)
|+..|+|||++. +..++.++||||||+++|||++|+.||... ...............++..+++.+
T Consensus 174 ~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-------- 239 (284)
T 2vgo_A 174 GTLDYLPPEMIE-GKTHDEKVDLWCAGVLCYEFLVGMPPFDSP-----SHTETHRRIVNVDLKFPPFLSDGS-------- 239 (284)
T ss_dssp SCGGGCCHHHHT-TCCBCTTHHHHHHHHHHHHHHHSSCTTCCS-----SHHHHHHHHHTTCCCCCTTSCHHH--------
T ss_pred CCCCcCCHHHhc-cCCCCcccchhhHHHHHHHHHHCCCCCCCC-----CHhHHHHHHhccccCCCCcCCHHH--------
Confidence 889999999955 467899999999999999999999999742 223333333333333333344333
Q ss_pred HHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 549 QVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 549 ~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+++.+||+.||.+|||+.|+++
T Consensus 240 -----~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 240 -----KDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp -----HHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -----HHHHHHHhhcCHhhCCCHHHHhh
Confidence 45777799999999999999985
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=6.3e-29 Score=244.32 Aligned_cols=207 Identities=18% Similarity=0.241 Sum_probs=154.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|.....+ +.||||.+.... .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (276)
T 2h6d_A 16 GDTLGVGTFGKVKIGEHQLTG-----HKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM 90 (276)
T ss_dssp EEEEEECSSEEEEEEEETTTC-----CEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred EeeecCCCCeEEEEEEECCCC-----ceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence 467999999999999987654 799999997542 2233468999999999999999999999999999999999
Q ss_pred ecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCccc----------c
Q 007935 425 DFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI----------S 467 (584)
Q Consensus 425 Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~----------~ 467 (584)
||+++++|.+++. .. -|.++.+.|+.+..+..++..+++... .
T Consensus 91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 170 (276)
T 2h6d_A 91 EYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS 170 (276)
T ss_dssp ECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-------
T ss_pred eccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccCCCcceecc
Confidence 9999999977663 22 356777788877777778887776432 3
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHH
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAK 547 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 547 (584)
.||+.|+|||++......+.++||||||+++|||++|+.||... ...............++..+++.
T Consensus 171 ~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-------- 237 (276)
T 2h6d_A 171 CGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE-----HVPTLFKKIRGGVFYIPEYLNRS-------- 237 (276)
T ss_dssp ------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHCCCCCCTTSCHH--------
T ss_pred cCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCC-----cHHHHHHHhhcCcccCchhcCHH--------
Confidence 57889999999654333468999999999999999999999742 23333333333333333334433
Q ss_pred HHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 548 RQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 548 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+.+++.+||+.||++|||+.|+++
T Consensus 238 -----l~~li~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 238 -----VATLLMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp -----HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -----HHHHHHHHccCChhhCCCHHHHHh
Confidence 345777799999999999999986
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-29 Score=254.38 Aligned_cols=222 Identities=21% Similarity=0.271 Sum_probs=162.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC--CceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN--DEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~--~~~~lV~ 424 (584)
.+.||+|+||.||++.+.... ....+.||||+++........+.|.+|++++++++|||||++++++.+. ...++||
T Consensus 36 ~~~lG~G~~g~V~~~~~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 114 (318)
T 3lxp_A 36 IRDLGEGHFGKVSLYCYDPTN-DGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVM 114 (318)
T ss_dssp EEEEEECSSEEEEEEEECSCC---CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEE
T ss_pred hheecCCCCeEEEEEEEccCC-CCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEE
Confidence 467999999999998764321 1223899999998765555567899999999999999999999999884 5689999
Q ss_pred ecccCCcHHHHHhc------------------------c--cccccCCCCccccccCeEEecCCCccc------------
Q 007935 425 DFIRNGSLYAALHG------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI------------ 466 (584)
Q Consensus 425 Ey~~~GsL~~~L~~------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~------------ 466 (584)
||+++|+|.+++.. . .|+++++.|+.+..+..++..|+|...
T Consensus 115 e~~~~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 194 (318)
T 3lxp_A 115 EYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVR 194 (318)
T ss_dssp CCCTTCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSEEEC-
T ss_pred ecccCCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCccccccccccccccccc
Confidence 99999999776643 2 367788888888777777777776432
Q ss_pred --ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCC----------CCcHHHHHHHHhhc-CCCCc
Q 007935 467 --SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEND----------GKGLESLVRKAFRE-RRPLS 533 (584)
Q Consensus 467 --~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~----------~~~l~~~~~~~~~~-~~~~~ 533 (584)
..+|..|+|||++.. ..++.++||||||+++|||+||+.||...... ......+....... ..+..
T Consensus 195 ~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (318)
T 3lxp_A 195 EDGDSPVFWYAPECLKE-YKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRP 273 (318)
T ss_dssp --CCCCGGGCCHHHHHH-CEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCCCCC
T ss_pred cCCCCCceeeChHHhcC-CCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccCCCCC
Confidence 246777999999654 67899999999999999999999998642110 00000111111111 11112
Q ss_pred cccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 534 EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 534 ~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
..++ ..+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 274 ~~~~-------------~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~ 310 (318)
T 3lxp_A 274 DKCP-------------AEVYHLMKNCWETEASFRPTFENLIPILKTVHE 310 (318)
T ss_dssp TTCC-------------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cccc-------------HHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 2222 245668888999999999999999999998864
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-29 Score=262.46 Aligned_cols=206 Identities=17% Similarity=0.205 Sum_probs=158.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.++||+|+||.||+|+...++ +.||||++++.. .....+.+.+|..++.+++|||||++++++.+.+..|+||
T Consensus 66 ~~~lG~G~fG~V~~~~~~~~~-----~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVm 140 (412)
T 2vd5_A 66 LKVIGRGAFSEVAVVKMKQTG-----QVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVM 140 (412)
T ss_dssp EEEEEECSSCEEEEEEETTTC-----CEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEE
T ss_pred EEEEeeCCCeEEEEEEECCCC-----CEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 478999999999999998765 899999997531 2223466899999999999999999999999999999999
Q ss_pred ecccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCcc-----------
Q 007935 425 DFIRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSR----------- 465 (584)
Q Consensus 425 Ey~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~----------- 465 (584)
||+++|+|.++++. . .|++++++|+.+..++.++..|||..
T Consensus 141 E~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~~~ 220 (412)
T 2vd5_A 141 EYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRS 220 (412)
T ss_dssp CCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEEC
T ss_pred cCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhheeccCCCcccc
Confidence 99999999877643 2 36888889988888888888888743
Q ss_pred -cccCCCcccCcccccc------CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhc--CCCC---c
Q 007935 466 -ISAISNVYLAPEARIY------GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE--RRPL---S 533 (584)
Q Consensus 466 -~~~gt~~y~aPE~~~~------~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~--~~~~---~ 533 (584)
..+||+.|||||++.. +..++.++|||||||++|||+||+.||.... ........... ...+ .
T Consensus 221 ~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~-----~~~~~~~i~~~~~~~~~p~~~ 295 (412)
T 2vd5_A 221 LVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADS-----TAETYGKIVHYKEHLSLPLVD 295 (412)
T ss_dssp SSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHTHHHHCCCC---
T ss_pred ceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCC-----HHHHHHHHHhcccCcCCCccc
Confidence 2378999999998652 3468999999999999999999999997522 22222222221 1111 1
Q ss_pred cccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCC---CChHHHHH
Q 007935 534 EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFR---PRMRTVSE 576 (584)
Q Consensus 534 ~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~R---Pt~~ev~~ 576 (584)
..++++ +.+++.+||. +|.+| |+++|+.+
T Consensus 296 ~~~s~~-------------~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 296 EGVPEE-------------ARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp -CCCHH-------------HHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred cCCCHH-------------HHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 233333 3457777999 99998 68888864
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=7.7e-29 Score=253.57 Aligned_cols=158 Identities=20% Similarity=0.320 Sum_probs=135.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|.....+ ..||+|++.........+.+.+|+.++++++|||||++++++.+++..++||||
T Consensus 38 ~~~lg~G~~g~V~~~~~~~~~-----~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 38 ISELGAGNGGVVFKVSHKPSG-----LVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp EEEEEECSSCEEEEEEETTTC-----CEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred eeeecCCCCeEEEEEEECCCC-----cEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 468999999999999998665 899999998764445557899999999999999999999999999999999999
Q ss_pred ccCCcHHHHH-------------------------hc---ccccccCCCCccccccCeEEecCCCcc---------cccC
Q 007935 427 IRNGSLYAAL-------------------------HG---FGLNRLLPGTSKVTKNETIVTSGTGSR---------ISAI 469 (584)
Q Consensus 427 ~~~GsL~~~L-------------------------~~---~g~~~~~~~~~~i~~~~~~~~~~~~~~---------~~~g 469 (584)
+++|+|.+++ |. ..|+++++.|+.+..++.++..|+|.. ...|
T Consensus 113 ~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~g 192 (360)
T 3eqc_A 113 MDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG 192 (360)
T ss_dssp CTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC----CC
T ss_pred CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccccccCCCC
Confidence 9999996655 32 246778888888888888888888743 2478
Q ss_pred CCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCC
Q 007935 470 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAG 510 (584)
Q Consensus 470 t~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~ 510 (584)
|+.|+|||++. +..++.++|||||||++|||+||+.||..
T Consensus 193 t~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~ 232 (360)
T 3eqc_A 193 TRSYMSPERLQ-GTHYSVQSDIWSMGLSLVEMAVGRYPIPP 232 (360)
T ss_dssp CCTTCCHHHHT-TCCCSHHHHHHHHHHHHHHHHHTSCCSSC
T ss_pred CCCeECHHHHc-CCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 99999999954 46899999999999999999999999975
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=7.4e-29 Score=244.29 Aligned_cols=208 Identities=26% Similarity=0.355 Sum_probs=159.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|...++ ..||||.++..... .+.|.+|++++++++||||+++++++. .+..++||||
T Consensus 18 ~~~lg~G~~g~Vy~~~~~~~------~~vavK~~~~~~~~--~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~ 88 (279)
T 1qpc_A 18 VERLGAGQFGEVWMGYYNGH------TKVAVKSLKQGSMS--PDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEY 88 (279)
T ss_dssp EEEEEEETTEEEEEEEETTT------EEEEEEEECTTSSC--HHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEEC
T ss_pred eeeecCCCCeEEEEEEEcCC------cEEEEEEecCCccc--HHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEec
Confidence 46799999999999998765 78999999765332 378999999999999999999999976 5568999999
Q ss_pred ccCCcHHHHHh---------------------------cc--cccccCCCCccccccCeEEecCCCccc-----------
Q 007935 427 IRNGSLYAALH---------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI----------- 466 (584)
Q Consensus 427 ~~~GsL~~~L~---------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~----------- 466 (584)
+++|+|.+++. .. -|+++.+.|+.+..+..++..+++...
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 168 (279)
T 1qpc_A 89 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE 168 (279)
T ss_dssp CTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCT
T ss_pred CCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcccccccCccccccc
Confidence 99999977664 22 357777888877777777777776432
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCC-CCccccChhhhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERR-PLSEVIDPALVKE 543 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~d~~~~~~ 543 (584)
..++..|+|||++.. ..++.++||||||+++|||+| |+.||.+.. ..+.......... ..+..+++
T Consensus 169 ~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~----- 237 (279)
T 1qpc_A 169 GAKFPIKWTAPEAINY-GTFTIKSDVWSFGILLTEIVTHGRIPYPGMT-----NPEVIQNLERGYRMVRPDNCPE----- 237 (279)
T ss_dssp TCCCCTTTSCHHHHHH-CEECHHHHHHHHHHHHHHHHTTTCCSSTTCC-----HHHHHHHHHTTCCCCCCTTCCH-----
T ss_pred CCCCccCccChhhhcc-CCCCchhhhHHHHHHHHHHHhCCCCCCcccC-----HHHHHHHHhcccCCCCcccccH-----
Confidence 235678999999654 578999999999999999999 999997422 2223322222211 11222222
Q ss_pred hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 544 IHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 544 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.+.+++.+||+.||++|||+.++++.|+++.
T Consensus 238 --------~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 268 (279)
T 1qpc_A 238 --------ELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 268 (279)
T ss_dssp --------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --------HHHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence 3456778899999999999999999999874
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5.1e-29 Score=245.35 Aligned_cols=209 Identities=25% Similarity=0.382 Sum_probs=158.0
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC-CceeEee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN-DEKLLIS 424 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~-~~~~lV~ 424 (584)
..+.||+|+||.||++... + +.||||.++... ..+.|.+|++++++++|||||++++++.+. +..++||
T Consensus 25 ~~~~lg~G~~g~V~~~~~~-~------~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~ 94 (278)
T 1byg_A 25 LLQTIGKGEFGDVMLGDYR-G------NKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 94 (278)
T ss_dssp EEEEEEECSSCEEEEEEET-T------EEEEEEECCCCC-----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred EEeEEecCCCceEEEEEEc-C------CEEEEEEecchh---HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEE
Confidence 3568999999999999875 3 799999997643 237899999999999999999999997654 4789999
Q ss_pred ecccCCcHHHHHhc---------------------------c--cccccCCCCccccccCeEEecCCCccc--------c
Q 007935 425 DFIRNGSLYAALHG---------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI--------S 467 (584)
Q Consensus 425 Ey~~~GsL~~~L~~---------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~--------~ 467 (584)
||+++|+|.+++.. . -|+++.+.|+.+..++.++..+++... .
T Consensus 95 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 174 (278)
T 1byg_A 95 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 174 (278)
T ss_dssp CCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC-----------
T ss_pred ecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeeccccccccccccCC
Confidence 99999999766642 2 367777888888777788888876432 3
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhc-CCCCccccChhhhhhhh
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRE-RRPLSEVIDPALVKEIH 545 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~d~~~~~~~~ 545 (584)
.++..|+|||++.. ..++.++||||||+++|||+| |+.||..... .......... .......+++
T Consensus 175 ~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~------- 241 (278)
T 1byg_A 175 KLPVKWTAPEALRE-KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-----KDVVPRVEKGYKMDAPDGCPP------- 241 (278)
T ss_dssp -CCTTTSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG-----GGHHHHHTTTCCCCCCTTCCH-------
T ss_pred CccccccCHHHhCC-CCCCchhcHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHhcCCCCCCcccCCH-------
Confidence 56788999999654 678999999999999999999 9999975322 1222222221 1112222333
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 546 AKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
.+.+++.+||+.||++|||+.|+++.|++++.
T Consensus 242 ------~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~ 273 (278)
T 1byg_A 242 ------AVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 273 (278)
T ss_dssp ------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ------HHHHHHHHHhcCChhhCCCHHHHHHHHHHHHh
Confidence 34557777999999999999999999999864
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-29 Score=254.71 Aligned_cols=208 Identities=21% Similarity=0.304 Sum_probs=155.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|....++ +.||||.+.... ..+.+|++++.++ +|||||++++++.+++..++|||
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~-----~~~avK~~~~~~-----~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E 96 (342)
T 2qr7_A 27 KEDIGVGSYSVCKRCIHKATN-----MEFAVKIIDKSK-----RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE 96 (342)
T ss_dssp EEEEEECSSEEEEEEEETTTT-----EEEEEEEEETTT-----CCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred EEEEeeCCCEEEEEEEECCCC-----CEEEEEEEEccc-----CChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 468999999999999998765 899999997643 2346799999988 79999999999999999999999
Q ss_pred cccCCcHHHHH-------------------------hcc--cccccCCCCcccccc----CeEEecCCCcc---------
Q 007935 426 FIRNGSLYAAL-------------------------HGF--GLNRLLPGTSKVTKN----ETIVTSGTGSR--------- 465 (584)
Q Consensus 426 y~~~GsL~~~L-------------------------~~~--g~~~~~~~~~~i~~~----~~~~~~~~~~~--------- 465 (584)
|+++|+|.+++ |+. -|++++++|+.+... ..++..|+|..
T Consensus 97 ~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~~ 176 (342)
T 2qr7_A 97 LMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGL 176 (342)
T ss_dssp CCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTCC
T ss_pred CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCCc
Confidence 99999997655 333 367788888775433 23677777632
Q ss_pred --cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhh
Q 007935 466 --ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKE 543 (584)
Q Consensus 466 --~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~ 543 (584)
...||+.|+|||++.. ..++.++|||||||++|||++|+.||.... ......+..........+.....+.+.
T Consensus 177 ~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~s-- 251 (342)
T 2qr7_A 177 LMTPCYTANFVAPEVLER-QGYDAACDIWSLGVLLYTMLTGYTPFANGP--DDTPEEILARIGSGKFSLSGGYWNSVS-- 251 (342)
T ss_dssp BCCSSCCSSCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHSSCSSCSST--TSCHHHHHHHHHHCCCCCCSTTTTTSC--
T ss_pred eeccCCCccccCHHHhcC-CCCCCccCeeeHhHHHHHHhcCCCCCCCCC--cCCHHHHHHHHccCCcccCccccccCC--
Confidence 2367999999999554 568999999999999999999999997532 223444444444433332211111111
Q ss_pred hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 544 IHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 544 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
..+.+++.+||+.||++|||+.|+++
T Consensus 252 -------~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 252 -------DTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp -------HHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred -------HHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 13445777899999999999999874
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-28 Score=243.32 Aligned_cols=216 Identities=17% Similarity=0.213 Sum_probs=160.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcc-----hhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCcee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-----WRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKL 421 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~-----~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~ 421 (584)
.+.||+|+||.||+|+....+ +.||||.++..... ...+.|.+|++++++++||||+++++++.+.+..+
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~-----~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 10 GEELGSGQFAIVRKCRQKGTG-----KEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp EEEEEECSSEEEEEEEETTTC-----CEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred HHhhcccCceEEEEEEEcCCC-----CeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 467999999999999988655 89999998764211 12478999999999999999999999999999999
Q ss_pred EeeecccCCcHHHHHh-------------------------cc--cccccCCCCccccccC----eEEecCCCccc----
Q 007935 422 LISDFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNE----TIVTSGTGSRI---- 466 (584)
Q Consensus 422 lV~Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~----~~~~~~~~~~~---- 466 (584)
+||||+++++|.+++. +. .|.++.+.|+.+..++ .++..+++...
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~ 164 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA 164 (283)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC-
T ss_pred EEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceeccC
Confidence 9999999999977664 22 3567777777766554 56777776432
Q ss_pred ------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhh
Q 007935 467 ------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPAL 540 (584)
Q Consensus 467 ------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~ 540 (584)
..||+.|+|||++. +..++.++||||||+++|||++|+.||.... ............... ++..
T Consensus 165 ~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~----~~~~ 234 (283)
T 3bhy_A 165 GNEFKNIFGTPEFVAPEIVN-YEPLGLEADMWSIGVITYILLSGASPFLGET-----KQETLTNISAVNYDF----DEEY 234 (283)
T ss_dssp -------CCCGGGCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHTTCCCC----CHHH
T ss_pred CCcccccCCCcCccCcceec-CCCCCcchhhhhHHHHHHHHHHCCCCCCCcc-----hHHHHHHhHhcccCC----cchh
Confidence 35889999999854 4688999999999999999999999997522 222222222222111 1111
Q ss_pred hhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH--HHHhhh
Q 007935 541 VKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE--SLDRVK 582 (584)
Q Consensus 541 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~--~L~~i~ 582 (584)
... ....+.+++.+||+.||++|||+.|+++ .++.++
T Consensus 235 ~~~-----~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 273 (283)
T 3bhy_A 235 FSN-----TSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR 273 (283)
T ss_dssp HTT-----CCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred ccc-----CCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence 111 1124567888999999999999999986 455543
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-29 Score=258.52 Aligned_cols=227 Identities=11% Similarity=0.115 Sum_probs=160.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcch----------hhHhHHHHHHHHHhcCCCceeeeeEEEEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATW----------RFKDFESEVEAIARVQHPNIVRLKAFYYA 416 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~----------~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~ 416 (584)
.+.||+|+||.||+|.+..++.....+.||||++....... ....+.+|+..+++++|||||++++++..
T Consensus 40 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~ 119 (364)
T 3op5_A 40 GLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLH 119 (364)
T ss_dssp EEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEEE
T ss_pred EEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeeee
Confidence 46799999999999999876544445789999987643110 11234556667778889999999999987
Q ss_pred C----CceeEeeecccCCcHHHHHh--------------------------cc--cccccCCCCcccc--ccCeEEecCC
Q 007935 417 N----DEKLLISDFIRNGSLYAALH--------------------------GF--GLNRLLPGTSKVT--KNETIVTSGT 462 (584)
Q Consensus 417 ~----~~~~lV~Ey~~~GsL~~~L~--------------------------~~--g~~~~~~~~~~i~--~~~~~~~~~~ 462 (584)
. ...++||||+ +|+|.++++ .. -|+++++.|+.+. .+..++..||
T Consensus 120 ~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~~~kl~DF 198 (364)
T 3op5_A 120 DKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDY 198 (364)
T ss_dssp EETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTTCEEECCC
T ss_pred ccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCCeEEEEEC
Confidence 5 4489999999 999976653 33 3688888888887 6677778887
Q ss_pred Cccc------------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Q 007935 463 GSRI------------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRK 524 (584)
Q Consensus 463 ~~~~------------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~ 524 (584)
|... ..||+.|||||++. +..++.++|||||||++|||+||+.||.+...+. ........
T Consensus 199 G~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~-~~~~~~~~ 276 (364)
T 3op5_A 199 GLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHN-GVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDP-KYVRDSKI 276 (364)
T ss_dssp TTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH-HHHHHHHH
T ss_pred CcceecccCCcccccccCcccccCCCCCccCHHHhC-CCCCCchhhHHHHHHHHHHHHhCCCCccccccCH-HHHHHHHH
Confidence 7441 23899999999854 4679999999999999999999999998533221 12222222
Q ss_pred HhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 525 AFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 525 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
..... +.+..++.+.. .....++.+++..||+.||++||++.+|++.|+++.
T Consensus 277 ~~~~~--~~~~~~~~~~~----~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~ 328 (364)
T 3op5_A 277 RYREN--IASLMDKCFPA----ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGL 328 (364)
T ss_dssp HHHHC--HHHHHHHHSCT----TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred Hhhhh--HHHHHHHhccc----ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Confidence 22111 11111111100 011235677888899999999999999999998763
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-29 Score=247.86 Aligned_cols=206 Identities=17% Similarity=0.243 Sum_probs=140.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|+....+ +.||||.+.... .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 16 ~~~lg~G~~g~Vy~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (278)
T 3cok_A 16 GNLLGKGSFAGVYRAESIHTG-----LEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL 90 (278)
T ss_dssp EEEEEECSSEEEEEEEETTTC-----CEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred eeeecCCCceEEEEEEEccCC-----ceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence 467999999999999986655 799999997542 1223467999999999999999999999999999999999
Q ss_pred ecccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc----------
Q 007935 425 DFIRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 425 Ey~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
||+++|+|.+++.. . .|.++.+.|+.+..+..++..+++...
T Consensus 91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 170 (278)
T 3cok_A 91 EMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHY 170 (278)
T ss_dssp ECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC-------
T ss_pred ecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCCcce
Confidence 99999999766642 2 357777788877777777777776432
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIH 545 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~ 545 (584)
..||+.|+|||++.. ..++.++||||||+++|||+||+.||....... ............+..+++
T Consensus 171 ~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~------- 237 (278)
T 3cok_A 171 TLCGTPNYISPEIATR-SAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKN-----TLNKVVLADYEMPSFLSI------- 237 (278)
T ss_dssp ----------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC----------CCSSCCCCCTTSCH-------
T ss_pred eccCCCCcCCcchhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCChhHHH-----HHHHHhhcccCCccccCH-------
Confidence 357889999998554 678999999999999999999999997533221 111111111122222232
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 546 AKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||+.||++|||+.|+++
T Consensus 238 ------~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 238 ------EAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp ------HHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ------HHHHHHHHHcccCHhhCCCHHHHhc
Confidence 3456778899999999999999975
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.3e-29 Score=250.21 Aligned_cols=211 Identities=17% Similarity=0.193 Sum_probs=157.3
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEe
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLI 423 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV 423 (584)
..+.||+|+||.||+|....++ +.||||+++... .....+.+.+|+.++.++ +||||+++++++.+.+..++|
T Consensus 33 ~~~~lG~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv 107 (327)
T 3lm5_A 33 TSKELGRGKFAVVRQCISKSTG-----QEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILI 107 (327)
T ss_dssp EEEEEEEETTEEEEEEEETTTC-----CEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred ccceeCCCCCeEEEEEEECCCC-----CEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEE
Confidence 3478999999999999988765 899999997652 233357899999999999 569999999999999999999
Q ss_pred eecccCCcHHHHH---------------------------hccc--ccccCCCCccccc---cCeEEecCCCccc-----
Q 007935 424 SDFIRNGSLYAAL---------------------------HGFG--LNRLLPGTSKVTK---NETIVTSGTGSRI----- 466 (584)
Q Consensus 424 ~Ey~~~GsL~~~L---------------------------~~~g--~~~~~~~~~~i~~---~~~~~~~~~~~~~----- 466 (584)
|||+++|+|.+++ |+.| |+++++.|+.+.. ++.++..++|...
T Consensus 108 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~ 187 (327)
T 3lm5_A 108 LEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA 187 (327)
T ss_dssp EECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC---
T ss_pred EEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCc
Confidence 9999999985544 4333 5777788877665 4667777776432
Q ss_pred -----ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhh
Q 007935 467 -----SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALV 541 (584)
Q Consensus 467 -----~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~ 541 (584)
..||+.|+|||++. +..++.++|||||||++|||+||+.||.... ....................+.+
T Consensus 188 ~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-----~~~~~~~i~~~~~~~~~~~~~~~- 260 (327)
T 3lm5_A 188 CELREIMGTPEYLAPEILN-YDPITTATDMWNIGIIAYMLLTHTSPFVGED-----NQETYLNISQVNVDYSEETFSSV- 260 (327)
T ss_dssp ------CCCGGGCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHTCCCCCTTTTTTS-
T ss_pred cccccccCCcCccCCeeec-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----chHHHHHHHhcccccCchhhccc-
Confidence 36899999999954 4689999999999999999999999997522 22222222222211111111111
Q ss_pred hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 542 KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 542 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
...+.+++.+||+.||++|||+.|+++
T Consensus 261 --------~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 261 --------SQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp --------CHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred --------CHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 123456788899999999999999975
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=9.2e-29 Score=243.56 Aligned_cols=209 Identities=18% Similarity=0.230 Sum_probs=158.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEe--CCceeEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYA--NDEKLLI 423 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~--~~~~~lV 423 (584)
.+.||+|+||.||+++...++ +.||+|.+.... .....+.|.+|++++++++||||+++++++.+ .+..++|
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 85 (279)
T 2w5a_A 11 LYTIGTGSYGRCQKIRRKSDG-----KILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV 85 (279)
T ss_dssp EEEEEECSSSEEEEEEETTTC-----CEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEE
T ss_pred ehhccCCCCcEEEEEEECCCC-----cEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEE
Confidence 467999999999999987665 899999997653 33345789999999999999999999998865 5678999
Q ss_pred eecccCCcHHHHHh-----------------------------c-------ccccccCCCCccccccCeEEecCCCccc-
Q 007935 424 SDFIRNGSLYAALH-----------------------------G-------FGLNRLLPGTSKVTKNETIVTSGTGSRI- 466 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~-----------------------------~-------~g~~~~~~~~~~i~~~~~~~~~~~~~~~- 466 (584)
|||+++|+|.+++. . ..|+++.+.|+.+..+..++..+++...
T Consensus 86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~ 165 (279)
T 2w5a_A 86 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 165 (279)
T ss_dssp EECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHH
T ss_pred EeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhee
Confidence 99999999976653 3 2356677777777777778888876432
Q ss_pred ----------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC-CCccc
Q 007935 467 ----------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR-PLSEV 535 (584)
Q Consensus 467 ----------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~~~ 535 (584)
..||..|+|||++.. ..++.++||||||+++|||+||+.||.... ............. .++..
T Consensus 166 ~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~i~~~~~~~~~~~ 239 (279)
T 2w5a_A 166 LNHDTSFAKTFVGTPYYMSPEQMNR-MSYNEKSDIWSLGCLLYELCALMPPFTAFS-----QKELAGKIREGKFRRIPYR 239 (279)
T ss_dssp C---CHHHHHHHSCCTTCCHHHHHC-C-CCHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHTCCCCCCTT
T ss_pred eccccccccccCCCccccChHHhcc-CCCCchhhHHHHHHHHHHHHHCCCCCcccC-----HHHHHHHHhhcccccCCcc
Confidence 358899999999554 678999999999999999999999997532 2233333322221 22222
Q ss_pred cChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHH
Q 007935 536 IDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579 (584)
Q Consensus 536 ~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~ 579 (584)
+++ .+.+++.+||+.||++|||+.|+++.+.
T Consensus 240 ~~~-------------~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 240 YSD-------------ELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp SCH-------------HHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred cCH-------------HHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 333 3455777799999999999999997654
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=9.1e-29 Score=271.25 Aligned_cols=216 Identities=20% Similarity=0.322 Sum_probs=165.8
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
..+.||+|+||.||+|.....+. ....||||+++........+.|.+|+.++++++|||||++++++ .++..++|||
T Consensus 394 i~~~LG~G~fG~Vy~a~~~~~~~--~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~-~~~~~~lv~E 470 (656)
T 2j0j_A 394 LGRCIGEGQFGDVHQGIYMSPEN--PAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIME 470 (656)
T ss_dssp EEEEEECCSSCCEEEEEECCSSS--CCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred EeeEEeeCCCEEEEEEEEecCCC--ccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-ecCceEEEEE
Confidence 35789999999999999865432 12789999998755555557899999999999999999999998 4567899999
Q ss_pred cccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc-----------
Q 007935 426 FIRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI----------- 466 (584)
Q Consensus 426 y~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~----------- 466 (584)
|+++|+|.++++. . .|++++++|+.+..++.++..|+|...
T Consensus 471 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~ 550 (656)
T 2j0j_A 471 LCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS 550 (656)
T ss_dssp CCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC-------
T ss_pred cCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCeecCCCcceecc
Confidence 9999999777642 2 467888889888888888888887432
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhc-CCCCccccChhhhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRE-RRPLSEVIDPALVKE 543 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~d~~~~~~ 543 (584)
..+|+.|||||++.. ..++.++|||||||++|||++ |+.||.+.. ..+........ ..+.+..+++
T Consensus 551 ~~~~t~~y~aPE~~~~-~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~-----~~~~~~~i~~~~~~~~~~~~~~----- 619 (656)
T 2j0j_A 551 KGKLPIKWMAPESINF-RRFTSASDVWMFGVCMWEILMHGVKPFQGVK-----NNDVIGRIENGERLPMPPNCPP----- 619 (656)
T ss_dssp ---CCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----HHHHHHHHHHTCCCCCCTTCCH-----
T ss_pred CCCCCcceeCHHHhcC-CCCCchhhHHHHHHHHHHHHHcCCCCCCCCC-----HHHHHHHHHcCCCCCCCccccH-----
Confidence 245678999999654 689999999999999999997 999997532 22233222222 2222333333
Q ss_pred hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 544 IHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 544 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
.+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 620 --------~l~~li~~~l~~dP~~RPs~~el~~~L~~il~ 651 (656)
T 2j0j_A 620 --------TLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 651 (656)
T ss_dssp --------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --------HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 34457778999999999999999999998743
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.9e-29 Score=253.77 Aligned_cols=201 Identities=15% Similarity=0.180 Sum_probs=156.4
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc-------chhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCc
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-------TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDE 419 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~-------~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~ 419 (584)
.+.||+|+||.||+|+....+ +.||||+++.... ....+.+.+|++++++++|||||++++++.+.+.
T Consensus 29 ~~~lG~G~~g~Vy~a~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~ 103 (335)
T 3dls_A 29 MSPLGSGAFGFVWTAVDKEKN-----KEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGF 103 (335)
T ss_dssp EEECSSSSSCSEEEEEETTTT-----EEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred EeEEEecCCEEEEEEEECCCC-----cEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCE
Confidence 468999999999999987765 8999999986521 1133578899999999999999999999999999
Q ss_pred eeEeeecccCC-cHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCccc-----
Q 007935 420 KLLISDFIRNG-SLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI----- 466 (584)
Q Consensus 420 ~~lV~Ey~~~G-sL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~----- 466 (584)
.++||||+.+| +|.+++. .. -|+++++.|+.+..+..++..|+|...
T Consensus 104 ~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 183 (335)
T 3dls_A 104 FQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERG 183 (335)
T ss_dssp EEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccceECCCC
Confidence 99999999877 8865553 33 367888888888888888888887432
Q ss_pred -----ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhh
Q 007935 467 -----SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALV 541 (584)
Q Consensus 467 -----~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~ 541 (584)
..||+.|+|||++.....++.++|||||||++|||++|+.||..... ........+..+++.
T Consensus 184 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----------~~~~~~~~~~~~~~~-- 250 (335)
T 3dls_A 184 KLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE-----------TVEAAIHPPYLVSKE-- 250 (335)
T ss_dssp CCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG-----------GTTTCCCCSSCCCHH--
T ss_pred CceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH-----------HHhhccCCCcccCHH--
Confidence 35899999999965533348899999999999999999999974211 111111122233333
Q ss_pred hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 542 KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 542 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+.+++.+||+.||++|||+.|+++
T Consensus 251 -----------l~~li~~~L~~dP~~Rps~~ell~ 274 (335)
T 3dls_A 251 -----------LMSLVSGLLQPVPERRTTLEKLVT 274 (335)
T ss_dssp -----------HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -----------HHHHHHHHccCChhhCcCHHHHhc
Confidence 445777799999999999999986
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-29 Score=253.66 Aligned_cols=222 Identities=15% Similarity=0.182 Sum_probs=155.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|+...++ +.||||+++..........+.+|++++++++|||||++++++.+.+..++||||
T Consensus 7 ~~~lG~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 7 LDKLGEGTYATVYKGKSKLTD-----NLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp EEEEEECSSEEEEEEEETTTC-----CEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred EEEEcCCCCEEEEEEEECCCC-----cEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 467999999999999988665 899999997654333334677899999999999999999999999999999999
Q ss_pred ccCCcHHHHH--------------------------hcc--cccccCCCCccccccCeEEecCCCccc-----------c
Q 007935 427 IRNGSLYAAL--------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSRI-----------S 467 (584)
Q Consensus 427 ~~~GsL~~~L--------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~-----------~ 467 (584)
++ |+|.+++ |+. .|+++++.|+.+..++.++..++|... .
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 160 (324)
T 3mtl_A 82 LD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNE 160 (324)
T ss_dssp CS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC----------
T ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccCCccccccc
Confidence 98 5776554 333 367888888888777888888887432 2
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC--CCccccChhhhhh--
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR--PLSEVIDPALVKE-- 543 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~d~~~~~~-- 543 (584)
.||..|+|||++.....++.++|||||||++|||+||+.||.+.... .....+........ .++...+......
T Consensus 161 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (324)
T 3mtl_A 161 VVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVE--EQLHFIFRILGTPTEETWPGILSNEEFKTYN 238 (324)
T ss_dssp --CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCCCCTTTSTTGGGCHHHHHTC
T ss_pred cCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCChHhchhhhcchhhcccc
Confidence 57899999998665467899999999999999999999999753211 11111222111110 0111110000000
Q ss_pred ----------hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 544 ----------IHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 544 ----------~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.........+.+++.+||+.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 239 YPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp CCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 000011235678999999999999999999985
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-28 Score=247.12 Aligned_cols=217 Identities=21% Similarity=0.330 Sum_probs=157.7
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCc-----
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDE----- 419 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~----- 419 (584)
..+.||+|+||.||+|....... ....||||+++... .....+.|.+|+.++++++||||+++++++.+.+.
T Consensus 38 ~~~~lg~G~~g~V~~~~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 115 (313)
T 3brb_A 38 LGKILGEGEFGSVMEGNLKQEDG--TSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPK 115 (313)
T ss_dssp EEEEEEC-CCCCEEEEEEECTTS--CEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------C
T ss_pred eccceeecCCeEEEEEEEeccCC--ceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcc
Confidence 45789999999999998765321 12689999997652 33345779999999999999999999999987653
Q ss_pred eeEeeecccCCcHHHHHh-------------------------------cc--cccccCCCCccccccCeEEecCCCccc
Q 007935 420 KLLISDFIRNGSLYAALH-------------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI 466 (584)
Q Consensus 420 ~~lV~Ey~~~GsL~~~L~-------------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~ 466 (584)
.++||||+++|+|.+++. .. -|+++++.|+.+..+..++..++|...
T Consensus 116 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~ 195 (313)
T 3brb_A 116 PMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSK 195 (313)
T ss_dssp EEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCEEECSCSCC-
T ss_pred cEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEEeecCcce
Confidence 599999999999987762 22 367777888888777788888876432
Q ss_pred -------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhc-CCC
Q 007935 467 -------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRE-RRP 531 (584)
Q Consensus 467 -------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~-~~~ 531 (584)
..++..|+|||.+. +..++.++||||||+++|||+| |+.||...... .. ....... ...
T Consensus 196 ~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~---~~~~~~~~~~~ 269 (313)
T 3brb_A 196 KIYSGDYYRQGRIAKMPVKWIAIESLA-DRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH--EM---YDYLLHGHRLK 269 (313)
T ss_dssp ---------------CCGGGSCHHHHH-SSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GH---HHHHHTTCCCC
T ss_pred ecccccccCcccccCCCccccCchhhc-CCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH--HH---HHHHHcCCCCC
Confidence 24567899999954 4689999999999999999999 88998753221 12 2222222 112
Q ss_pred CccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 532 ~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
.+..+++ .+.+++.+||+.||++|||+.++++.|+++..
T Consensus 270 ~~~~~~~-------------~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~ 308 (313)
T 3brb_A 270 QPEDCLD-------------ELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLE 308 (313)
T ss_dssp CBTTCCH-------------HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCccccH-------------HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 2222332 34567778999999999999999999998753
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-28 Score=261.90 Aligned_cols=205 Identities=20% Similarity=0.313 Sum_probs=157.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||+||+|+...++ +.||||++.... .....+.+.+|++++++++|||||++++++.+.+..++|||
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 101 (486)
T 3mwu_A 27 VCMLGKGSFGEVLKCKDRITQ-----QEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE 101 (486)
T ss_dssp EEEEECCSSSEEEEEEETTTC-----CEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred eEEEeecCCEEEEEEEECCCC-----CEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEE
Confidence 468999999999999987665 899999996541 22234789999999999999999999999999999999999
Q ss_pred cccCCcHHHHH-------------------------hcc--cccccCCCCccccc---cCeEEecCCCcc----------
Q 007935 426 FIRNGSLYAAL-------------------------HGF--GLNRLLPGTSKVTK---NETIVTSGTGSR---------- 465 (584)
Q Consensus 426 y~~~GsL~~~L-------------------------~~~--g~~~~~~~~~~i~~---~~~~~~~~~~~~---------- 465 (584)
|+++|+|.+++ |.. .|+++++.|+.+.. +..++..++|..
T Consensus 102 ~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~ 181 (486)
T 3mwu_A 102 LYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMK 181 (486)
T ss_dssp CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC----
T ss_pred cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCccC
Confidence 99999996554 433 36778888877743 345777777643
Q ss_pred cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCc----cccChhhh
Q 007935 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLS----EVIDPALV 541 (584)
Q Consensus 466 ~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~----~~~d~~~~ 541 (584)
...||+.|+|||++ .+ .++.++||||+||++|||++|+.||.+. ................. ..+++
T Consensus 182 ~~~gt~~y~aPE~~-~~-~~~~~~DiwslG~il~~ll~g~~pf~~~-----~~~~~~~~i~~~~~~~~~~~~~~~s~--- 251 (486)
T 3mwu_A 182 DRIGTAYYIAPEVL-RG-TYDEKCDVWSAGVILYILLSGTPPFYGK-----NEYDILKRVETGKYAFDLPQWRTISD--- 251 (486)
T ss_dssp CCTTGGGGCCGGGG-GS-CCCHHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHTCCCSCSGGGGGSCH---
T ss_pred CCcCCCCCCCHHHh-CC-CCCchhhHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHhCCCCCCCcccCCCCH---
Confidence 23689999999985 43 6999999999999999999999999752 22333333333322211 12222
Q ss_pred hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 542 KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 542 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||+.||++|||+.|+++
T Consensus 252 ----------~~~~li~~~L~~dp~~R~t~~~~l~ 276 (486)
T 3mwu_A 252 ----------DAKDLIRKMLTFHPSLRITATQCLE 276 (486)
T ss_dssp ----------HHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred ----------HHHHHHHHHcCCChhhCcCHHHHhc
Confidence 3456788899999999999999986
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=8.7e-29 Score=245.78 Aligned_cols=208 Identities=20% Similarity=0.287 Sum_probs=155.1
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
..+||+|+||.||+|....++ +.||||.+.... ....+.+.+|+.++++++|||||++++++.+.+..++||||
T Consensus 27 ~~~lg~G~~g~Vy~~~~~~~~-----~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 100 (295)
T 2clq_A 27 RVVLGKGTYGIVYAGRDLSNQ-----VRIAIKEIPERD-SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQ 100 (295)
T ss_dssp BCEEEECSSSEEEEEEETTTC-----CEEEEEEEECCC-C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cEEEeecCcEEEEEEEECCCC-----eEEEEEEccCCc-hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEe
Confidence 358999999999999987665 899999997653 33347899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc----------------------------c--cccccCCCCccccc-cCeEEecCCCcc----------
Q 007935 427 IRNGSLYAALHG----------------------------F--GLNRLLPGTSKVTK-NETIVTSGTGSR---------- 465 (584)
Q Consensus 427 ~~~GsL~~~L~~----------------------------~--g~~~~~~~~~~i~~-~~~~~~~~~~~~---------- 465 (584)
+++|+|.+++.. . -|.++.+.|+.+.. +..++..+++..
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~ 180 (295)
T 2clq_A 101 VPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCT 180 (295)
T ss_dssp CSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----
T ss_pred CCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCCCCCcc
Confidence 999999776642 2 35667777777765 566777777633
Q ss_pred -cccCCCcccCccccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH-HhhcCCCCccccChhhhh
Q 007935 466 -ISAISNVYLAPEARIYG-SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRK-AFRERRPLSEVIDPALVK 542 (584)
Q Consensus 466 -~~~gt~~y~aPE~~~~~-~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~d~~~~~ 542 (584)
...||..|+|||++..+ ..++.++||||||+++|||+||+.||...... ....... .......++..+++.
T Consensus 181 ~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~--- 254 (295)
T 2clq_A 181 ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEP---QAAMFKVGMFKVHPEIPESMSAE--- 254 (295)
T ss_dssp CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSH---HHHHHHHHHHCCCCCCCTTSCHH---
T ss_pred cccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCch---hHHHHhhccccccccccccCCHH---
Confidence 23688899999986543 23789999999999999999999999642211 1111111 112222233333333
Q ss_pred hhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 543 EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 543 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+.+++.+||+.||++|||+.|+++
T Consensus 255 ----------~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 255 ----------AKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp ----------HHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred ----------HHHHHHHHccCChhhCCCHHHHhc
Confidence 345777799999999999999975
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=6.9e-29 Score=250.89 Aligned_cols=223 Identities=19% Similarity=0.280 Sum_probs=160.1
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc-chhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~-~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|+...++ +.||||++..... ....+.+.+|++++++++|||||++++++.+.+..++|||
T Consensus 30 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 104 (331)
T 4aaa_A 30 LGLVGEGSYGMVMKCRNKDTG-----RIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE 104 (331)
T ss_dssp EEEGGGGTTSSEEEEEETTTC-----CEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEEeecCCEEEEEEEECCCC-----ceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence 468999999999999998765 8999999876533 2334668899999999999999999999999999999999
Q ss_pred cccCCcHHHH-------------------------Hhccc--ccccCCCCccccccCeEEecCCCccc-----------c
Q 007935 426 FIRNGSLYAA-------------------------LHGFG--LNRLLPGTSKVTKNETIVTSGTGSRI-----------S 467 (584)
Q Consensus 426 y~~~GsL~~~-------------------------L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~-----------~ 467 (584)
|+++++|.++ ||+.| |+++.+.|+.+..++.++..++|... .
T Consensus 105 ~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 184 (331)
T 4aaa_A 105 FVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDE 184 (331)
T ss_dssp CCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC------------C
T ss_pred cCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCccccCCC
Confidence 9999887544 34444 67788888888777888888876432 3
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHH----------hhc-----CCCC
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKA----------FRE-----RRPL 532 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~----------~~~-----~~~~ 532 (584)
.||..|+|||++.....++.++|||||||++|||+||+.||...... ..+....... ... ...+
T Consensus 185 ~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (331)
T 4aaa_A 185 VATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDI-DQLYHIMMCLGNLIPRHQELFNKNPVFAGVRL 263 (331)
T ss_dssp CCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCC
T ss_pred cCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHHHhCCCChhhhhHhhhccccccccC
Confidence 68899999998655447899999999999999999999999753211 1111111100 000 0000
Q ss_pred ccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 533 SEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 533 ~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+.......... ........+.+++.+||+.||++|||+.|+++
T Consensus 264 ~~~~~~~~~~~-~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 264 PEIKEREPLER-RYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp CCCSSCCCHHH-HSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ccccccchhhh-cccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 11000000000 00012345778999999999999999999975
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=99.96 E-value=3.1e-29 Score=251.10 Aligned_cols=197 Identities=36% Similarity=0.589 Sum_probs=177.0
Q ss_pred CCchHHHHHHHHHHHhcccCCCCCCCCCCCCCCCCCc--ceeeEecC----CCEEEEEcCCCCCcc--cCCccccCCCCC
Q 007935 20 FSLNQDGLALLALKAAIAQDPTRALDSWSESDSTPCH--WSGIHCIR----NRVTSLYLPNRNLTG--YMPSELGLLNSL 91 (584)
Q Consensus 20 ~~~~~~~~~l~~~~~~~~~~~~~~l~~w~~~~~~~c~--w~gv~c~~----~~v~~l~l~~~~l~~--~~~~~~~~l~~L 91 (584)
.|.++|.+||++||+++. +|. .+.+|..+ .+||. |.||+|+. ++|+.|+|++|+++| .+|..|+.+++|
T Consensus 2 ~c~~~~~~aL~~~k~~~~-~~~-~l~~W~~~-~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L 78 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLG-NPT-TLSSWLPT-TDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYL 78 (313)
T ss_dssp CSCHHHHHHHHHHHHHTT-CCG-GGTTCCTT-SCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTC
T ss_pred CCCHHHHHHHHHHHHhcC-Ccc-cccCCCCC-CCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCC
Confidence 467789999999999995 555 78999754 56777 99999985 689999999999999 899999999999
Q ss_pred CEEEccC-CCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEec
Q 007935 92 TRLSLAS-NNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLS 170 (584)
Q Consensus 92 ~~L~l~~-n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~ 170 (584)
++|+|++ |++.+.+|..|.++++|++|+|++|++++.+|..|.++++|++|+|++|.+++.+|..+..+++|+ .|+|+
T Consensus 79 ~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~-~L~L~ 157 (313)
T 1ogq_A 79 NFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLV-GITFD 157 (313)
T ss_dssp SEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCC-EEECC
T ss_pred CeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCC-eEECc
Confidence 9999995 999999999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred cccCccccCccccCCC-CCcEEEeecCCCccCCCCCCCccccCCcccCCCC
Q 007935 171 FNQFSGQIPEMYGHFP-VMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 171 ~N~l~~~~p~~~~~l~-~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
+|++++.+|..++.++ +|+.|+|++|.+++.+|.......+..+.+++|.
T Consensus 158 ~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~Ls~N~ 208 (313)
T 1ogq_A 158 GNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNM 208 (313)
T ss_dssp SSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSE
T ss_pred CCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCcccEEECcCCc
Confidence 9999999999999998 9999999999999988843322235666666664
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.7e-29 Score=252.59 Aligned_cols=222 Identities=18% Similarity=0.183 Sum_probs=151.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc-chhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~-~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|+....+ +.||||+++.... ....+.+.+|++++++++|||||++++++.+++..++|||
T Consensus 39 ~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 113 (329)
T 3gbz_A 39 ITKLGEGTYGEVYKAIDTVTN-----ETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFE 113 (329)
T ss_dssp EEEEEECSSSEEEEEEETTTT-----EEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred EEEEEecCCeEEEEEEECCCC-----ceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEe
Confidence 468999999999999987765 8999999976532 2234678899999999999999999999999999999999
Q ss_pred cccCCcHHHHH-------------------------hcc--cccccCCCCcccccc-----CeEEecCCCcc--------
Q 007935 426 FIRNGSLYAAL-------------------------HGF--GLNRLLPGTSKVTKN-----ETIVTSGTGSR-------- 465 (584)
Q Consensus 426 y~~~GsL~~~L-------------------------~~~--g~~~~~~~~~~i~~~-----~~~~~~~~~~~-------- 465 (584)
|+++ +|.+++ |+. .|++++++|+.+..+ ..++..++|..
T Consensus 114 ~~~~-~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~ 192 (329)
T 3gbz_A 114 YAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIR 192 (329)
T ss_dssp CCSE-EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC----
T ss_pred cCCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCccc
Confidence 9984 886555 333 367788888877433 34777787643
Q ss_pred ---cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhc-CCC----------
Q 007935 466 ---ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE-RRP---------- 531 (584)
Q Consensus 466 ---~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~-~~~---------- 531 (584)
...||..|+|||++.....++.++|||||||++|||++|+.||...... ..+.......... ...
T Consensus 193 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (329)
T 3gbz_A 193 QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEI-DQLFKIFEVLGLPDDTTWPGVTALPDW 271 (329)
T ss_dssp -------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHH-HHHHHHHHHhCCCchhhhhhhhhhhhh
Confidence 2357899999999665456899999999999999999999999753211 1111111111000 000
Q ss_pred ---CccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 532 ---LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 532 ---~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+......+.... .......+.+++.+||+.||++|||+.|+++
T Consensus 272 ~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 272 KQSFPKFRGKTLKRVL-GALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp CTTCCCCCCCCHHHHH-GGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhccccHhhhc-ccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 0000011111000 0011245678999999999999999999985
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=9.4e-29 Score=253.24 Aligned_cols=217 Identities=19% Similarity=0.281 Sum_probs=151.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC-CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCC------c
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARVQHPNIVRLKAFYYAND------E 419 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~------~ 419 (584)
.+.||+|+||.||+|.....+ +.||||++... ......+++.+|++++++++|||||++++++...+ .
T Consensus 30 ~~~lG~G~~g~V~~a~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~ 104 (367)
T 1cm8_A 30 LQPVGSGAYGAVCSAVDGRTG-----AKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD 104 (367)
T ss_dssp EEEC------CEEEEEETTTC-----CEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred eEEeeecCCeEEEEEEECCCC-----CEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCce
Confidence 467999999999999987765 89999999664 23333577999999999999999999999998753 4
Q ss_pred eeEeeecccCCcHHHHH------------------------hcc--cccccCCCCccccccCeEEecCCCccc-------
Q 007935 420 KLLISDFIRNGSLYAAL------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSRI------- 466 (584)
Q Consensus 420 ~~lV~Ey~~~GsL~~~L------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~------- 466 (584)
.++||||+ +++|.+++ |.. -|+++++.|+.+..+..++..++|...
T Consensus 105 ~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 183 (367)
T 1cm8_A 105 FYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMT 183 (367)
T ss_dssp CEEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSSCC
T ss_pred EEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeecccccccccC
Confidence 69999999 78886554 433 367888888888888888888887432
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhc-CCCCccc----cC---
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE-RRPLSEV----ID--- 537 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~~~----~d--- 537 (584)
..||+.|+|||++.....++.++||||+||++|||++|+.||.+... ...+...... ..+..+. .+
T Consensus 184 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~l~~i~~~~g~~~~~~~~~~~~~~~ 258 (367)
T 1cm8_A 184 GYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDH-----LDQLKEIMKVTGTPPAEFVQRLQSDEA 258 (367)
T ss_dssp SSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHHHHCCCCHHHHHTCSCHHH
T ss_pred cCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHhcCCCCHHHHHHhhhHHH
Confidence 46899999999866546799999999999999999999999975321 1111111110 0000000 00
Q ss_pred ------------hhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 538 ------------PALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 538 ------------~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
..+.... ......+.+++.+||+.||++|||+.|+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 259 KNYMKGLPELEKKDFASIL--TNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp HHHHHHSCCCCCCCGGGTC--TTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHhCCCCCCCCHHHHC--CCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 0000000 011235677888999999999999999986
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-28 Score=262.63 Aligned_cols=205 Identities=21% Similarity=0.324 Sum_probs=159.1
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|+...++ +.||||++.... .....+.+.+|++++++++|||||++++++.+.+..++||
T Consensus 31 ~~~lg~G~~g~V~~~~~~~~~-----~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 105 (484)
T 3nyv_A 31 QRVLGKGSFGEVILCKDKITG-----QECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG 105 (484)
T ss_dssp EEEEEEETTEEEEEEEETTTC-----CEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eeEEecCCCEEEEEEEECCCC-----CEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 568999999999999988665 899999997542 2334578999999999999999999999999999999999
Q ss_pred ecccCCcHHHHH-------------------------hcc--cccccCCCCcccc---ccCeEEecCCCcc---------
Q 007935 425 DFIRNGSLYAAL-------------------------HGF--GLNRLLPGTSKVT---KNETIVTSGTGSR--------- 465 (584)
Q Consensus 425 Ey~~~GsL~~~L-------------------------~~~--g~~~~~~~~~~i~---~~~~~~~~~~~~~--------- 465 (584)
||+++|+|.+++ |.. .|+++++.|+.+. .+..++..++|..
T Consensus 106 e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~ 185 (484)
T 3nyv_A 106 EVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM 185 (484)
T ss_dssp CCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCCSH
T ss_pred ecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccccccc
Confidence 999999996555 333 3677888888773 4466777887733
Q ss_pred -cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCc----cccChhh
Q 007935 466 -ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLS----EVIDPAL 540 (584)
Q Consensus 466 -~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~----~~~d~~~ 540 (584)
...||+.|+|||++ .+ .++.++||||+||++|||++|+.||.+. ................. ..+++
T Consensus 186 ~~~~gt~~y~aPE~~-~~-~~~~~~DiwslG~il~~ll~g~~pf~~~-----~~~~~~~~i~~~~~~~~~~~~~~~s~-- 256 (484)
T 3nyv_A 186 KDKIGTAYYIAPEVL-HG-TYDEKCDVWSTGVILYILLSGCPPFNGA-----NEYDILKKVEKGKYTFELPQWKKVSE-- 256 (484)
T ss_dssp HHHTTGGGTCCHHHH-HT-CCCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHCCCCCCSGGGGGSCH--
T ss_pred ccCCCCccccCceee-cC-CCCCcceeHHHHHHHHHHHHCCCCCCCC-----CHHHHHHHHHcCCCCCCCcccccCCH--
Confidence 23689999999985 43 6999999999999999999999999752 22333333333332211 12222
Q ss_pred hhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 541 VKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 541 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||+.||.+|||+.|+++
T Consensus 257 -----------~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 257 -----------SAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp -----------HHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -----------HHHHHHHHHCCCChhHCcCHHHHhh
Confidence 3456778899999999999999984
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.8e-29 Score=250.06 Aligned_cols=222 Identities=19% Similarity=0.257 Sum_probs=160.8
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEe--CCceeEe
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYA--NDEKLLI 423 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~--~~~~~lV 423 (584)
..+.||+|+||.||+|++.... ....+.||||++.... ....+.|.+|++++++++||||+++++++.. .+..++|
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 104 (327)
T 3lxl_A 27 YISQLGKGNFGSVELCRYDPLG-DNTGALVAVKQLQHSG-PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLV 104 (327)
T ss_dssp EEEEEEEETTEEEEEEEECTTS-SSCSEEEEEEEESSCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEE
T ss_pred hhhhccCCCCeEEEEEEeccCC-CCcceEEEEEEeccCC-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEE
Confidence 3568999999999999853211 1112899999998753 3344779999999999999999999999884 4568999
Q ss_pred eecccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc---------
Q 007935 424 SDFIRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI--------- 466 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~--------- 466 (584)
|||+++|+|.+++.. . -|+++++.|+.+..++.++..|++...
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 184 (327)
T 3lxl_A 105 MEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYY 184 (327)
T ss_dssp EECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCEECCTTCSEE
T ss_pred EeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEcccccceecccCCccc
Confidence 999999999777643 2 367788888888778888887776432
Q ss_pred -----ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCC----------CCcHHHHHHHHhhcC-C
Q 007935 467 -----SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEND----------GKGLESLVRKAFRER-R 530 (584)
Q Consensus 467 -----~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~----------~~~l~~~~~~~~~~~-~ 530 (584)
..||..|+|||++.. ..++.++|||||||++|||+||+.||.....+ ............... .
T Consensus 185 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (327)
T 3lxl_A 185 VVREPGQSPIFWYAPESLSD-NIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRL 263 (327)
T ss_dssp ECSSCCCSCGGGSCHHHHHH-CEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTCCC
T ss_pred eeeccCCccccccCHHHhcc-CCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcccCC
Confidence 246777999998554 67899999999999999999999998642110 011111111111111 1
Q ss_pred CCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 531 PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 531 ~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
+.+..++ ..+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 264 ~~~~~~~-------------~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 303 (327)
T 3lxl_A 264 PAPPACP-------------AEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS 303 (327)
T ss_dssp CCCTTCC-------------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC--
T ss_pred CCCCccc-------------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 1111222 245568888999999999999999999998754
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-28 Score=261.44 Aligned_cols=209 Identities=18% Similarity=0.279 Sum_probs=155.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcc------------hhhHhHHHHHHHHHhcCCCceeeeeEEE
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT------------WRFKDFESEVEAIARVQHPNIVRLKAFY 414 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~------------~~~~~f~~Ei~~l~~l~HpnIV~l~g~~ 414 (584)
.+.||+|+||+||+|+...++ +.||||++...... ...+.+.+|+.++++++|||||++++++
T Consensus 41 ~~~lG~G~~g~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~ 115 (504)
T 3q5i_A 41 VRKLGSGAYGEVLLCKEKNGH-----SEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVF 115 (504)
T ss_dssp EEEEEC--CEEEEEEEETTTC-----CEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred EeEecccCCeEEEEEEECCCC-----cEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence 468999999999999998776 89999999764211 2346799999999999999999999999
Q ss_pred EeCCceeEeeecccCCcHHHHH-------------------------hccc--ccccCCCCccccccC---eEEecCCCc
Q 007935 415 YANDEKLLISDFIRNGSLYAAL-------------------------HGFG--LNRLLPGTSKVTKNE---TIVTSGTGS 464 (584)
Q Consensus 415 ~~~~~~~lV~Ey~~~GsL~~~L-------------------------~~~g--~~~~~~~~~~i~~~~---~~~~~~~~~ 464 (584)
.+.+..++||||+++|+|.+++ |..| |+++++.|+.+..++ .++..++|.
T Consensus 116 ~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~ 195 (504)
T 3q5i_A 116 EDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGL 195 (504)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECCCTT
T ss_pred EcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEECCC
Confidence 9999999999999999996555 3333 677888887776554 466777763
Q ss_pred c----------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCcc
Q 007935 465 R----------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSE 534 (584)
Q Consensus 465 ~----------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 534 (584)
. ...||+.|+|||++ . ..++.++||||+||++|||++|+.||.+. .................
T Consensus 196 a~~~~~~~~~~~~~gt~~y~aPE~~-~-~~~~~~~DiwslG~il~~ll~g~~pf~~~-----~~~~~~~~i~~~~~~~~- 267 (504)
T 3q5i_A 196 SSFFSKDYKLRDRLGTAYYIAPEVL-K-KKYNEKCDVWSCGVIMYILLCGYPPFGGQ-----NDQDIIKKVEKGKYYFD- 267 (504)
T ss_dssp CEECCTTSCBCCCCSCTTTCCHHHH-T-TCBCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHCCCCCC-
T ss_pred CEEcCCCCccccccCCcCCCCHHHh-c-cCCCchHHHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHcCCCCCC-
Confidence 3 24689999999984 4 46999999999999999999999999752 23344444433332211
Q ss_pred ccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 535 VIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 535 ~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
......+ ...+.+++.+||+.||.+|||+.|+++
T Consensus 268 ---~~~~~~~-----s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 268 ---FNDWKNI-----SDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp ---HHHHTTS-----CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ---ccccCCC-----CHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 1110111 124556788899999999999999984
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.3e-29 Score=254.62 Aligned_cols=221 Identities=15% Similarity=0.141 Sum_probs=158.2
Q ss_pred ceeceeecCceEEEEEecCCCCCC---CceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceee--------------
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMG---APTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR-------------- 409 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~---~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~-------------- 409 (584)
.+.||+|+||.||+|+...++... ..+.||||.+... +.+.+|++++++++|||||+
T Consensus 47 ~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~------~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~ 120 (352)
T 2jii_A 47 KSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD------GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIP 120 (352)
T ss_dssp EEEEEEETTEEEEEEEECC-----------CEEEEEEETT------STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCC
T ss_pred EEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc------chHHHHHHHHHHhcccchhhhhhhhccCCccCcc
Confidence 467999999999999987631100 1278999999753 56889999999999999998
Q ss_pred -eeEEEEe-CCceeEeeecccCCcHHHHHhc---------------------------c--cccccCCCCccccccC--e
Q 007935 410 -LKAFYYA-NDEKLLISDFIRNGSLYAALHG---------------------------F--GLNRLLPGTSKVTKNE--T 456 (584)
Q Consensus 410 -l~g~~~~-~~~~~lV~Ey~~~GsL~~~L~~---------------------------~--g~~~~~~~~~~i~~~~--~ 456 (584)
+++++.. ++..++||||+ +|+|.+++.. . -|+++++.|+.+..+. .
T Consensus 121 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~~~~ 199 (352)
T 2jii_A 121 TCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQ 199 (352)
T ss_dssp CCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETTEEEE
T ss_pred chhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCCCCce
Confidence 6788876 67889999999 9999877753 2 3677788888777665 6
Q ss_pred EEecCCCccc------------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcH
Q 007935 457 IVTSGTGSRI------------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGL 518 (584)
Q Consensus 457 ~~~~~~~~~~------------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l 518 (584)
++..++|... ..||+.|+|||++. +..++.++|||||||++|||+||+.||.........+
T Consensus 200 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~ 278 (352)
T 2jii_A 200 VTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHK-GCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDI 278 (352)
T ss_dssp EEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHH
T ss_pred EEEecCcceeeccCCCccccccccccccccCCccccCHHHHc-cCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHH
Confidence 7777776431 26889999999854 4689999999999999999999999998643222222
Q ss_pred HHHHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 519 ESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.............+.. +..... .....+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 279 ~~~~~~~~~~~~~~~~---~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 335 (352)
T 2jii_A 279 MKQKQKFVDKPGPFVG---PCGHWI----RPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALL 335 (352)
T ss_dssp HHHHHHHHHSCCCEEC---TTSCEE----CCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred HHHHHhccCChhhhhh---hccccC----CCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHH
Confidence 2222222222221111 100000 00124556778899999999999999999999874
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-28 Score=242.34 Aligned_cols=205 Identities=17% Similarity=0.217 Sum_probs=153.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC-CcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|.....+ +.||||+++.. .......++.+|+..+.++ +|||||++++++.+++..++||
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~ 90 (289)
T 1x8b_A 16 LEKIGSGEFGSVFKCVKRLDG-----CIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQN 90 (289)
T ss_dssp EEEEEEETTEEEEEEEETTTC-----CEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhhcCCCceEEEEEEEcCCC-----ceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 468999999999999988655 89999999865 2333457899999999999 9999999999999999999999
Q ss_pred ecccCCcHHHHHhc-----------------------------c--cccccCCCCcccccc-------------------
Q 007935 425 DFIRNGSLYAALHG-----------------------------F--GLNRLLPGTSKVTKN------------------- 454 (584)
Q Consensus 425 Ey~~~GsL~~~L~~-----------------------------~--g~~~~~~~~~~i~~~------------------- 454 (584)
||+++|+|.++++. . -|+++++.|+.+..+
T Consensus 91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~ 170 (289)
T 1x8b_A 91 EYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNK 170 (289)
T ss_dssp ECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------------C
T ss_pred EecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCCc
Confidence 99999999877642 2 367777777776532
Q ss_pred CeEEecCCCcc-------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhh
Q 007935 455 ETIVTSGTGSR-------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 527 (584)
Q Consensus 455 ~~~~~~~~~~~-------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~ 527 (584)
..++..+++.. ...||..|+|||++.....++.++|||||||++|||++|++|+.. ......+ ...
T Consensus 171 ~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~----~~~~~~~---~~~ 243 (289)
T 1x8b_A 171 VMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRN----GDQWHEI---RQG 243 (289)
T ss_dssp CCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSS----SHHHHHH---HTT
T ss_pred eEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcc----hhHHHHH---HcC
Confidence 24566676643 236899999999966544677899999999999999999987642 1111111 111
Q ss_pred cCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 528 ERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 528 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
....++..+++. +.+++.+||+.||++|||+.|+++
T Consensus 244 ~~~~~~~~~~~~-------------~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 244 RLPRIPQVLSQE-------------FTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp CCCCCSSCCCHH-------------HHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCCCCcccCHH-------------HHHHHHHHhCCCcccCCCHHHHhh
Confidence 112233334443 345777799999999999999975
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-28 Score=256.11 Aligned_cols=167 Identities=20% Similarity=0.344 Sum_probs=124.3
Q ss_pred hhhHhhhcceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEe--
Q 007935 339 LEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYA-- 416 (584)
Q Consensus 339 ~~~l~~~~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~-- 416 (584)
+++.....++.||+|+||.||+|+..++. ..+.||||++...... +.+.+|+++|++++|||||++++++..
T Consensus 18 ~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~---~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 91 (405)
T 3rgf_A 18 VEDLFEYEGCKVGRGTYGHVYKAKRKDGK---DDKDYALKQIEGTGIS---MSACREIALLRELKHPNVISLQKVFLSHA 91 (405)
T ss_dssp HHHHEECSSCCCC-----EEEEEEESSSS---CCCCEEEEECSSSSCC---HHHHHHHHHHHHCCCTTBCCCCEEEEETT
T ss_pred hhhhhhhcCcEeeecCCeEEEEEEEccCC---CCeEEEEEEECCCCCC---HHHHHHHHHHHhcCCCCeeeEeeEEecCC
Confidence 34444445678999999999999976431 1178999999764322 678999999999999999999999965
Q ss_pred CCceeEeeecccCCcHHHH----------------------------------Hhccc--ccccCCCCccc----cccCe
Q 007935 417 NDEKLLISDFIRNGSLYAA----------------------------------LHGFG--LNRLLPGTSKV----TKNET 456 (584)
Q Consensus 417 ~~~~~lV~Ey~~~GsL~~~----------------------------------L~~~g--~~~~~~~~~~i----~~~~~ 456 (584)
....++||||+++ +|.++ ||..| |+++++.|+.+ ..+..
T Consensus 92 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~ 170 (405)
T 3rgf_A 92 DRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGR 170 (405)
T ss_dssp TTEEEEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTC
T ss_pred CCeEEEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCc
Confidence 5678999999975 65433 34433 67788888877 44567
Q ss_pred EEecCCCccc--------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCC
Q 007935 457 IVTSGTGSRI--------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPE 512 (584)
Q Consensus 457 ~~~~~~~~~~--------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~ 512 (584)
++..++|... ..||+.|+|||++.....++.++|||||||++|||+||+.||....
T Consensus 171 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 240 (405)
T 3rgf_A 171 VKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 240 (405)
T ss_dssp EEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC
T ss_pred EEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCcc
Confidence 7888877432 3679999999986654568999999999999999999999997543
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-28 Score=248.18 Aligned_cols=211 Identities=19% Similarity=0.330 Sum_probs=152.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc-------chhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCc
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-------TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDE 419 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~-------~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~ 419 (584)
.+.||+|+||.||+|+...++ +.||||.+..... ......|.+|++++++++||||+++++++..++
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 88 (322)
T 2ycf_A 15 SKTLGSGACGEVKLAFERKTC-----KKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED- 88 (322)
T ss_dssp EEEEEECSSEEEEEEEETTTT-----EEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-
T ss_pred eeEEecCCCEEEEEEEEcCCC-----cEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-
Confidence 468999999999999987765 8999999975421 122356899999999999999999999987654
Q ss_pred eeEeeecccCCcHHHHH-------------------------hccc--ccccCCCCccccccCe---EEecCCCccc---
Q 007935 420 KLLISDFIRNGSLYAAL-------------------------HGFG--LNRLLPGTSKVTKNET---IVTSGTGSRI--- 466 (584)
Q Consensus 420 ~~lV~Ey~~~GsL~~~L-------------------------~~~g--~~~~~~~~~~i~~~~~---~~~~~~~~~~--- 466 (584)
.++||||+++|+|.+++ |..| |+++.+.|+.+..++. ++..++|...
T Consensus 89 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~ 168 (322)
T 2ycf_A 89 YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 168 (322)
T ss_dssp EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECC
T ss_pred eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccceecc
Confidence 89999999999996655 3333 5677777877765443 7777776432
Q ss_pred -------ccCCCcccCccccc--cCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccC
Q 007935 467 -------SAISNVYLAPEARI--YGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVID 537 (584)
Q Consensus 467 -------~~gt~~y~aPE~~~--~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d 537 (584)
..||..|+|||++. .+..++.++|||||||++|||++|+.||....... .+...+.. ..... .
T Consensus 169 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~---~~~~~----~ 240 (322)
T 2ycf_A 169 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-SLKDQITS---GKYNF----I 240 (322)
T ss_dssp CCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS-CHHHHHHH---TCCCC----C
T ss_pred cccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH-HHHHHHHh---Ccccc----C
Confidence 35899999999853 23578999999999999999999999997543322 23222221 11111 1
Q ss_pred hhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 538 PALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+..... ....+.+++.+||+.||++|||+.|+++
T Consensus 241 ~~~~~~-----~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 241 PEVWAE-----VSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp HHHHTT-----SCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred chhhhh-----cCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 111111 1224567888899999999999999974
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-28 Score=246.65 Aligned_cols=203 Identities=20% Similarity=0.232 Sum_probs=152.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC-CcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||+||+|+...++ +.||||++... .......++.+|+..+.++ +|||||+++++|.+++..++||
T Consensus 62 ~~~LG~G~~g~Vy~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 62 LSRLGHGSYGEVFKVRSKEDG-----RLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp EEEEEEETTEEEEEEEETTTS-----CEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred eheeccCCCeEEEEEEECCCC-----eEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 468999999999999998655 89999998764 2223345667777777666 9999999999999999999999
Q ss_pred ecccCCcHHHHH--------------------------hcc--cccccCCCCccccccCeEEecCCCcc----------c
Q 007935 425 DFIRNGSLYAAL--------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSR----------I 466 (584)
Q Consensus 425 Ey~~~GsL~~~L--------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~----------~ 466 (584)
||+ +|+|.+++ |.. -|++++++|+.+..+..++..|||.. .
T Consensus 137 e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 215 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEV 215 (311)
T ss_dssp ECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC------C
T ss_pred ecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccCCCCcc
Confidence 999 66886554 333 36788889988888888888888743 2
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhH
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 546 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 546 (584)
..||+.|+|||++ .+ .++.++|||||||++|||++|..|+.. . .. ........ ..+.....
T Consensus 216 ~~gt~~y~aPE~~-~~-~~~~~~DiwslG~il~el~~g~~~~~~----~---~~-~~~~~~~~------~~~~~~~~--- 276 (311)
T 3p1a_A 216 QEGDPRYMAPELL-QG-SYGTAADVFSLGLTILEVACNMELPHG----G---EG-WQQLRQGY------LPPEFTAG--- 276 (311)
T ss_dssp CCCCGGGCCGGGG-GT-CCSTHHHHHHHHHHHHHHHHTCCCCSS----H---HH-HHHHTTTC------CCHHHHTT---
T ss_pred cCCCccccCHhHh-cC-CCCchhhHHHHHHHHHHHHhCCCCCCC----c---cH-HHHHhccC------CCcccccC---
Confidence 3589999999985 43 689999999999999999999777643 1 11 11111111 11111111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 547 KRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 547 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
....+.+++.+||+.||++|||+.|+++
T Consensus 277 --~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 277 --LSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp --SCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred --CCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 1235667888899999999999999985
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.7e-29 Score=255.93 Aligned_cols=205 Identities=17% Similarity=0.243 Sum_probs=153.1
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcC--CCceeeeeEEEEeCCceeEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQ--HPNIVRLKAFYYANDEKLLI 423 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~--HpnIV~l~g~~~~~~~~~lV 423 (584)
.+.||+|+||.||+|....+ +.||||++.... .....+.|.+|++++.+++ |||||++++++..++..++|
T Consensus 61 ~~~LG~G~fg~Vy~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 134 (390)
T 2zmd_A 61 LKQIGSGGSSKVFQVLNEKK------QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 134 (390)
T ss_dssp EEEEECCSSEEEEEEECTTC------CEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred EEEEccCCCeEEEEEEcCCC------CEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEE
Confidence 46899999999999998764 799999997652 3334578999999999996 59999999999999999999
Q ss_pred eecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCcc-----------
Q 007935 424 SDFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR----------- 465 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~----------- 465 (584)
|| +.+|+|.+++. .. .|+++++.|+.+. ++.++..|||..
T Consensus 135 ~E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~ 212 (390)
T 2zmd_A 135 ME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVV 212 (390)
T ss_dssp EE-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC--------
T ss_pred Ee-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCcccc
Confidence 99 56789876654 32 4678888888774 466777777643
Q ss_pred --cccCCCcccCcccccc----------CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC--C
Q 007935 466 --ISAISNVYLAPEARIY----------GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR--P 531 (584)
Q Consensus 466 --~~~gt~~y~aPE~~~~----------~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~--~ 531 (584)
...||+.|+|||++.. ...++.++|||||||++|||++|+.||..... ............. .
T Consensus 213 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~----~~~~~~~~~~~~~~~~ 288 (390)
T 2zmd_A 213 KDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN----QISKLHAIIDPNHEIE 288 (390)
T ss_dssp -CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC----HHHHHHHHHCTTSCCC
T ss_pred CCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH----HHHHHHHHhCccccCC
Confidence 2368999999998543 13689999999999999999999999975321 1222222222211 1
Q ss_pred CccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 532 ~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+...++ .+.+++.+||+.||++|||+.|+++
T Consensus 289 ~~~~~~~-------------~~~~li~~~L~~dP~~Rps~~ell~ 320 (390)
T 2zmd_A 289 FPDIPEK-------------DLQDVLKCCLKRDPKQRISIPELLA 320 (390)
T ss_dssp CCCCSCH-------------HHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCccchH-------------HHHHHHHHHcccChhhCCCHHHHhh
Confidence 2222222 3456778899999999999999985
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-28 Score=244.61 Aligned_cols=206 Identities=20% Similarity=0.281 Sum_probs=155.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|....++ +.||+|.+.... ....+.|.+|++++++++||||+++++++.+++..++||||
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~-----~~~aiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 97 (302)
T 2j7t_A 24 VGELGDGAFGKVYKAKNKETG-----ALAAAKVIETKS-EEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF 97 (302)
T ss_dssp EEEEECSTTCCEEEEEETTTC-----CEEEEEEEC-----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred cceeccCCCeEEEEEEEcCCC-----cEEEEEEecCCC-HHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence 457999999999999998765 799999997643 23347899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHh--------------------------cc--cccccCCCCccccccCeEEecCCCcc-----------cc
Q 007935 427 IRNGSLYAALH--------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR-----------IS 467 (584)
Q Consensus 427 ~~~GsL~~~L~--------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~ 467 (584)
+++|+|.+++. .. .|.++.+.|+.+..++.++..++|.. ..
T Consensus 98 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 177 (302)
T 2j7t_A 98 CPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSF 177 (302)
T ss_dssp CTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC----
T ss_pred CCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCccccccccccccc
Confidence 99999976653 22 36777788888877788888888642 23
Q ss_pred cCCCcccCccccc----cCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC---CccccChhh
Q 007935 468 AISNVYLAPEARI----YGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP---LSEVIDPAL 540 (584)
Q Consensus 468 ~gt~~y~aPE~~~----~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~d~~~ 540 (584)
.||..|+|||++. .+..++.++|||||||++|||+||+.||.... .............+ ....+++
T Consensus 178 ~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-- 250 (302)
T 2j7t_A 178 IGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN-----PMRVLLKIAKSDPPTLLTPSKWSV-- 250 (302)
T ss_dssp -CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSC-----HHHHHHHHHHSCCCCCSSGGGSCH--
T ss_pred cCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCC-----HHHHHHHHhccCCcccCCccccCH--
Confidence 6899999999863 34678999999999999999999999997422 22222222222211 1112222
Q ss_pred hhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 541 VKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 541 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||+.||++|||+.|+++
T Consensus 251 -----------~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 251 -----------EFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp -----------HHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred -----------HHHHHHHHHcccChhhCCCHHHHhc
Confidence 3456788899999999999999975
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-28 Score=251.47 Aligned_cols=214 Identities=19% Similarity=0.275 Sum_probs=161.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC---cchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeE
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD---ATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLL 422 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~---~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~l 422 (584)
.+.||+|+||.||+|+...+. ...+.||||+++... .....+.+.+|++++.++ +||||+++++++.+.+..++
T Consensus 59 ~~~lG~G~~g~Vy~~~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 136 (355)
T 1vzo_A 59 LKVLGTGAYGKVFLVRKISGH--DTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHL 136 (355)
T ss_dssp EEEEEETTTEEEEEEEECSST--TTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEE
T ss_pred EEEeccCCCEEEEEEEEcccC--CCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEE
Confidence 468999999999999985321 112899999997542 222346788999999999 79999999999999999999
Q ss_pred eeecccCCcHHHHHhc-------------------------c--cccccCCCCccccccCeEEecCCCccc---------
Q 007935 423 ISDFIRNGSLYAALHG-------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI--------- 466 (584)
Q Consensus 423 V~Ey~~~GsL~~~L~~-------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~--------- 466 (584)
||||+++|+|.++++. . -|+++++.|+.+..++.++..+||...
T Consensus 137 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 216 (355)
T 1vzo_A 137 ILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETER 216 (355)
T ss_dssp EECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGG
T ss_pred EeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCeecccCCCCc
Confidence 9999999999766642 2 467888888888878888888887432
Q ss_pred ---ccCCCcccCccccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhh
Q 007935 467 ---SAISNVYLAPEARIYG-SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVK 542 (584)
Q Consensus 467 ---~~gt~~y~aPE~~~~~-~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~ 542 (584)
..||+.|+|||++..+ ..++.++|||||||++|||+||+.||..... ......+.........+.+..+++.
T Consensus 217 ~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--- 292 (355)
T 1vzo_A 217 AYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGE-KNSQAEISRRILKSEPPYPQEMSAL--- 292 (355)
T ss_dssp GCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTS-CCCHHHHHHHHHHCCCCCCTTSCHH---
T ss_pred ccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCc-cchHHHHHHHHhccCCCCCcccCHH---
Confidence 3689999999996542 3578999999999999999999999975332 2234444555444444444444433
Q ss_pred hhhHHHHHHHHHHHHhcccCCCCCCCC-----ChHHHHH
Q 007935 543 EIHAKRQVLATFHIALNCTELDPEFRP-----RMRTVSE 576 (584)
Q Consensus 543 ~~~~~~~~~~~~~l~~~Cl~~~P~~RP-----t~~ev~~ 576 (584)
+.+++.+||+.||++|| |+.|+++
T Consensus 293 ----------~~~li~~~L~~dP~~R~~~~~~s~~ell~ 321 (355)
T 1vzo_A 293 ----------AKDLIQRLLMKDPKKRLGCGPRDADEIKE 321 (355)
T ss_dssp ----------HHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred ----------HHHHHHHHhhhCHHHhcCCCCCCHHHHHc
Confidence 34577779999999999 8999875
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-28 Score=241.04 Aligned_cols=204 Identities=18% Similarity=0.241 Sum_probs=158.4
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEe----------
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYA---------- 416 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~---------- 416 (584)
.+.||+|+||.||+|+....+ +.||||+++... +.+.+|++++++++||||+++++++..
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~-----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 85 (284)
T 2a19_B 16 IELIGSGGFGQVFKAKHRIDG-----KTYVIKRVKYNN-----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK 85 (284)
T ss_dssp EEEEECSSSCCEEEEEETTTC-----CEEEEEEEECCS-----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred eeeeccCCceEEEEEEEcCCC-----eEEEEEEecccc-----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence 468999999999999987654 899999997632 467899999999999999999999865
Q ss_pred ------CCceeEeeecccCCcHHHHHhc---------------------------c--cccccCCCCccccccCeEEecC
Q 007935 417 ------NDEKLLISDFIRNGSLYAALHG---------------------------F--GLNRLLPGTSKVTKNETIVTSG 461 (584)
Q Consensus 417 ------~~~~~lV~Ey~~~GsL~~~L~~---------------------------~--g~~~~~~~~~~i~~~~~~~~~~ 461 (584)
.+..++||||+++|+|.++++. . -|.++.+.|+.+..+..++..+
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~D 165 (284)
T 2a19_B 86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGD 165 (284)
T ss_dssp ---CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECC
T ss_pred cccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEECc
Confidence 3458999999999999877742 2 3577778888787777788877
Q ss_pred CCcc----------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC
Q 007935 462 TGSR----------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP 531 (584)
Q Consensus 462 ~~~~----------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~ 531 (584)
++.. ...||+.|+|||++.. ..++.++|||||||++|||+||..|+.. ........... .
T Consensus 166 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~~~~~~~~-------~~~~~~~~~~~--~ 235 (284)
T 2a19_B 166 FGLVTSLKNDGKRTRSKGTLRYMSPEQISS-QDYGKEVDLYALGLILAELLHVCDTAFE-------TSKFFTDLRDG--I 235 (284)
T ss_dssp CTTCEESSCCSCCCCCCSCCTTSCHHHHHC-SCCCTHHHHHHHHHHHHHHHSCCSSHHH-------HHHHHHHHHTT--C
T ss_pred chhheeccccccccccCCcccccChhhhcc-CCCcchhhhHHHHHHHHHHHhcCCcchh-------HHHHHHHhhcc--c
Confidence 7632 2358899999999554 6789999999999999999999988642 11222222111 1
Q ss_pred CccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 532 ~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
+...+++.+ .+++.+||+.||++|||+.|+++.|+.++.
T Consensus 236 ~~~~~~~~~-------------~~li~~~l~~dp~~Rps~~e~l~~l~~~~~ 274 (284)
T 2a19_B 236 ISDIFDKKE-------------KTLLQKLLSKKPEDRPNTSEILRTLTVWKK 274 (284)
T ss_dssp CCTTSCHHH-------------HHHHHHHTCSSGGGSCCHHHHHHHHHHHTC
T ss_pred ccccCCHHH-------------HHHHHHHccCChhhCcCHHHHHHHHHHHhh
Confidence 233344433 456777999999999999999999998764
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=8.2e-29 Score=250.77 Aligned_cols=210 Identities=19% Similarity=0.233 Sum_probs=143.7
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcC-CCceeeeeEEEEe--------
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-HPNIVRLKAFYYA-------- 416 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~-HpnIV~l~g~~~~-------- 416 (584)
..+.||+|+||.||+|+....+ +.||||++.... ....+.+.+|+.++.++. |||||++++++..
T Consensus 32 ~~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 105 (337)
T 3ll6_A 32 VRRVLAEGGFAFVYEAQDVGSG-----REYALKRLLSNE-EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG 105 (337)
T ss_dssp EEEEEECCSSEEEEEEEETTTC-----CEEEEEEEEESS-HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred EEEEEccCCceEEEEEEECCCC-----cEEEEEEecCCc-hHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence 4578999999999999987665 899999986543 333478999999999996 9999999999953
Q ss_pred CCceeEeeecccCCcHHHHH----------------------------hccc----ccccCCCCccccccCeEEecCCCc
Q 007935 417 NDEKLLISDFIRNGSLYAAL----------------------------HGFG----LNRLLPGTSKVTKNETIVTSGTGS 464 (584)
Q Consensus 417 ~~~~~lV~Ey~~~GsL~~~L----------------------------~~~g----~~~~~~~~~~i~~~~~~~~~~~~~ 464 (584)
....++||||+. |+|.+++ |..| |+++++.|+.+..+..++..+++.
T Consensus 106 ~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 184 (337)
T 3ll6_A 106 QAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGS 184 (337)
T ss_dssp SEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTT
T ss_pred CceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCcc
Confidence 334799999996 6875544 4334 677788888888778888888875
Q ss_pred cc-----------------------ccCCCcccCccccc--cCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHH
Q 007935 465 RI-----------------------SAISNVYLAPEARI--YGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLE 519 (584)
Q Consensus 465 ~~-----------------------~~gt~~y~aPE~~~--~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~ 519 (584)
.. ..||+.|+|||++. .+..++.++|||||||++|||+||+.||..... .
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~-----~ 259 (337)
T 3ll6_A 185 ATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK-----L 259 (337)
T ss_dssp CBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----------
T ss_pred ceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhH-----H
Confidence 42 24888999999852 345788999999999999999999999974221 1
Q ss_pred HHHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 520 SLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 520 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
........ .+.....++. +.+++.+||+.||++|||+.|+++.|+++.
T Consensus 260 ~~~~~~~~--~~~~~~~~~~-------------~~~li~~~l~~~p~~Rps~~e~l~~l~~~~ 307 (337)
T 3ll6_A 260 RIVNGKYS--IPPHDTQYTV-------------FHSLIRAMLQVNPEERLSIAEVVHQLQEIA 307 (337)
T ss_dssp ------CC--CCTTCCSSGG-------------GHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred HhhcCccc--CCcccccchH-------------HHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 11111111 1112222222 334777799999999999999999999874
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-28 Score=270.14 Aligned_cols=201 Identities=17% Similarity=0.222 Sum_probs=163.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLI 423 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV 423 (584)
.++||+|+||.||+|+...++ +.||||+++... .....+.+.+|..++..+ +||||+++++++.+.+..|+|
T Consensus 346 ~~~LG~G~fG~V~~~~~~~~~-----~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV 420 (674)
T 3pfq_A 346 LMVLGKGSFGKVMLSERKGTD-----ELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV 420 (674)
T ss_dssp EEESSBTTTBCEEEEEESSSC-----CEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEE
T ss_pred EEEEccCCCEEEEEEEECCCC-----cEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEE
Confidence 468999999999999998765 899999997641 223347789999999988 799999999999999999999
Q ss_pred eecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCcc-----------
Q 007935 424 SDFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR----------- 465 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~----------- 465 (584)
|||+++|+|.++++ .. -|+|++++|+.+..++.++..|||..
T Consensus 421 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~~ 500 (674)
T 3pfq_A 421 MEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTK 500 (674)
T ss_dssp EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTTCCBC
T ss_pred EeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeeccccCCcccc
Confidence 99999999976664 33 36889999999988888888888743
Q ss_pred cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhh
Q 007935 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIH 545 (584)
Q Consensus 466 ~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~ 545 (584)
...||+.|||||++. +..|+.++|||||||++|||+||+.||.+ ....++..........++..+++++.
T Consensus 501 ~~~GT~~Y~APE~l~-~~~~~~~~DvwSlGvilyelltG~~Pf~~-----~~~~~~~~~i~~~~~~~p~~~s~~~~---- 570 (674)
T 3pfq_A 501 TFCGTPDYIAPEIIA-YQPYGKSVDWWAFGVLLYEMLAGQAPFEG-----EDEDELFQSIMEHNVAYPKSMSKEAV---- 570 (674)
T ss_dssp CCCSCSSSCCHHHHT-CCCBSTHHHHHHHHHHHHHHHHSSCSSCC-----SSHHHHHHHHHSSCCCCCTTSCHHHH----
T ss_pred cccCCCcccCHhhhc-CCCCCccceEechHHHHHHHHcCCCCCCC-----CCHHHHHHHHHhCCCCCCccCCHHHH----
Confidence 246899999999954 46899999999999999999999999974 23445556666555555555555544
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCCh
Q 007935 546 AKRQVLATFHIALNCTELDPEFRPRM 571 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RPt~ 571 (584)
+++.+||+.||++||++
T Consensus 571 ---------~li~~lL~~dP~~R~~~ 587 (674)
T 3pfq_A 571 ---------AICKGLMTKHPGKRLGC 587 (674)
T ss_dssp ---------HHHHHHSCSSSTTCTTC
T ss_pred ---------HHHHHHccCCHHHCCCC
Confidence 46666999999999998
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=99.96 E-value=6.7e-28 Score=246.77 Aligned_cols=211 Identities=20% Similarity=0.261 Sum_probs=159.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcc-------hhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCC
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-------WRFKDFESEVEAIARV-QHPNIVRLKAFYYAND 418 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~-------~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~ 418 (584)
.+.||+|+||.||+|+...++ +.||||+++..... ...+.+.+|+.++.++ +||||+++++++...+
T Consensus 99 ~~~lg~G~~g~Vy~a~~~~~g-----~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 173 (365)
T 2y7j_A 99 KDVIGRGVSSVVRRCVHRATG-----HEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS 173 (365)
T ss_dssp EEEEEECSSEEEEEEEETTTC-----CEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSS
T ss_pred ceEEecCCCEEEEEEEECCCC-----cEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCC
Confidence 378999999999999997654 89999998764211 1235788999999999 8999999999999999
Q ss_pred ceeEeeecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCcc------
Q 007935 419 EKLLISDFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR------ 465 (584)
Q Consensus 419 ~~~lV~Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~------ 465 (584)
..++||||+++|+|.+++. .. -|++++++|+.+..++.++..|+|..
T Consensus 174 ~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~~ 253 (365)
T 2y7j_A 174 FMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPG 253 (365)
T ss_dssp EEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTT
T ss_pred EEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCcccccCCC
Confidence 9999999999999976653 22 46888888988888888888888732
Q ss_pred ----cccCCCcccCcccccc-----CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCcccc
Q 007935 466 ----ISAISNVYLAPEARIY-----GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVI 536 (584)
Q Consensus 466 ----~~~gt~~y~aPE~~~~-----~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 536 (584)
...||+.|+|||++.. ...++.++|||||||++|||+||+.||... ..................
T Consensus 254 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~-----~~~~~~~~i~~~~~~~~~-- 326 (365)
T 2y7j_A 254 EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHR-----RQILMLRMIMEGQYQFSS-- 326 (365)
T ss_dssp CCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHTCCCCCH--
T ss_pred cccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCC-----CHHHHHHHHHhCCCCCCC--
Confidence 2368999999998642 235889999999999999999999999742 122222222222211110
Q ss_pred ChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 537 DPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 537 d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+.. .. ....+.+++.+||+.||++|||+.|+++
T Consensus 327 -~~~-~~-----~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 327 -PEW-DD-----RSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp -HHH-SS-----SCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred -ccc-cc-----CCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 110 00 1124566888899999999999999986
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=3e-28 Score=250.04 Aligned_cols=218 Identities=18% Similarity=0.262 Sum_probs=155.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC-CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCC------c
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARVQHPNIVRLKAFYYAND------E 419 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~------~ 419 (584)
.+.||+|+||.||+|.....+ +.||||++... ......+.+.+|+.++++++|||||++++++...+ .
T Consensus 30 ~~~lG~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 104 (371)
T 2xrw_A 30 LKPIGSGAQGIVCAAYDAILE-----RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 104 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTT-----EEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCE
T ss_pred eeeeEecCCEEEEEEEECCCC-----ceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccc
Confidence 467999999999999987765 89999999764 23334577899999999999999999999998765 6
Q ss_pred eeEeeecccCCcHHH-----------------------HHhccc--ccccCCCCccccccCeEEecCCCccc--------
Q 007935 420 KLLISDFIRNGSLYA-----------------------ALHGFG--LNRLLPGTSKVTKNETIVTSGTGSRI-------- 466 (584)
Q Consensus 420 ~~lV~Ey~~~GsL~~-----------------------~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~-------- 466 (584)
.++||||+++ +|.+ |||+.| |++++++|+.+..++.++..|+|...
T Consensus 105 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~ 183 (371)
T 2xrw_A 105 VYIVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 183 (371)
T ss_dssp EEEEEECCSE-EHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC----------
T ss_pred eEEEEEcCCC-CHHHHHhhccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeeccccccccccc
Confidence 8999999985 6644 344444 67888888888888888888887432
Q ss_pred --ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcC-CCCcc---ccChhh
Q 007935 467 --SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER-RPLSE---VIDPAL 540 (584)
Q Consensus 467 --~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~---~~d~~~ 540 (584)
..||+.|+|||++.. ..++.++|||||||++|||+||+.||.+... ........... .+.++ .+.+.+
T Consensus 184 ~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~~~~i~~~~~~~~~~~~~~~~~~~ 257 (371)
T 2xrw_A 184 TPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDH-----IDQWNKVIEQLGTPCPEFMKKLQPTV 257 (371)
T ss_dssp ------CTTCCHHHHTT-CCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHC-CCCCCHHHHTTSCHHH
T ss_pred CCceecCCccCHHHhcC-CCCCchHhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHhCCCCHHHHHHhhhHH
Confidence 368899999999554 6899999999999999999999999975321 11111111110 00000 000000
Q ss_pred hh-------------------------hhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 541 VK-------------------------EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 541 ~~-------------------------~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.. ..........+.+++.+||+.||++|||++|+++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 258 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp HHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 00 0001122456789999999999999999999986
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=7.9e-29 Score=251.69 Aligned_cols=205 Identities=17% Similarity=0.241 Sum_probs=151.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCC--CceeeeeEEEEeCCceeEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQH--PNIVRLKAFYYANDEKLLI 423 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~H--pnIV~l~g~~~~~~~~~lV 423 (584)
.+.||+|+||.||++....+ +.||||++.... .....+.|.+|++++.+++| ||||++++++.+++..++|
T Consensus 14 ~~~lG~G~~g~Vy~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 14 LKQIGSGGSSKVFQVLNEKK------QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp EEEESCCSSEEEEEEECTTS------CEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred EEEEecCCCeEEEEEEeCCC------CEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 46799999999999998665 799999997652 33345789999999999976 9999999999999999999
Q ss_pred eecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCcc-----------
Q 007935 424 SDFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR----------- 465 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~----------- 465 (584)
|| +.+|+|.++++ .. -|+++++.|+.+. ++.++..|||..
T Consensus 88 ~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~ 165 (343)
T 3dbq_A 88 ME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVV 165 (343)
T ss_dssp EC-CCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC--------
T ss_pred Ee-CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeecccccccCccccccc
Confidence 99 56789876653 33 4678888888774 566777777643
Q ss_pred --cccCCCcccCcccccc----------CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcC--CC
Q 007935 466 --ISAISNVYLAPEARIY----------GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER--RP 531 (584)
Q Consensus 466 --~~~gt~~y~aPE~~~~----------~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~--~~ 531 (584)
...||+.|+|||++.. ...++.++|||||||++|||++|+.||..... ............ ..
T Consensus 166 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~----~~~~~~~~~~~~~~~~ 241 (343)
T 3dbq_A 166 KDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN----QISKLHAIIDPNHEIE 241 (343)
T ss_dssp ----CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS----HHHHHHHHHCTTSCCC
T ss_pred CCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh----HHHHHHHHhcCCcccC
Confidence 2368999999998642 25688999999999999999999999974322 112222222211 11
Q ss_pred CccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 532 ~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+...++ .+.+++.+||+.||++|||+.|+++
T Consensus 242 ~~~~~~~-------------~l~~li~~~L~~dp~~Rpt~~e~l~ 273 (343)
T 3dbq_A 242 FPDIPEK-------------DLQDVLKCCLKRDPKQRISIPELLA 273 (343)
T ss_dssp CCCCSCH-------------HHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CcccCCH-------------HHHHHHHHHcCCChhHCCCHHHHHh
Confidence 2222222 3445777899999999999999985
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=99.96 E-value=3.4e-28 Score=241.58 Aligned_cols=213 Identities=15% Similarity=0.119 Sum_probs=156.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEE-EeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFY-YANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~-~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|+....+ +.||||.+...... +.+.+|++++++++|+|++..++++ .+.+..++|||
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~---~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 4hgt_A 14 GRKIGSGSFGDIYLGTDIAAG-----EEVAIKLECVKTKH---PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp EEEEEECSSSEEEEEEETTTT-----EEEEEEEEEC---C---CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred eeeecCCCCeEEEEEEEcCCC-----ceEEEEeecccccc---hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEE
Confidence 467999999999999986665 89999987654322 5689999999999988877777766 55677899999
Q ss_pred cccCCcHHHHHh--------------------------cc--cccccCCCCccc---cccCeEEecCCCcc---------
Q 007935 426 FIRNGSLYAALH--------------------------GF--GLNRLLPGTSKV---TKNETIVTSGTGSR--------- 465 (584)
Q Consensus 426 y~~~GsL~~~L~--------------------------~~--g~~~~~~~~~~i---~~~~~~~~~~~~~~--------- 465 (584)
|+ +|+|.++++ +. -|+++++.|+.+ ..+..++..++|..
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~ 164 (296)
T 4hgt_A 86 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 164 (296)
T ss_dssp CC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred cc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccC
Confidence 99 999976654 22 367788888877 55667777777643
Q ss_pred ---------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCC--cHHHHHHHHhhcCCC-Cc
Q 007935 466 ---------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGK--GLESLVRKAFRERRP-LS 533 (584)
Q Consensus 466 ---------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~--~l~~~~~~~~~~~~~-~~ 533 (584)
...||..|+|||++. +..++.++|||||||++|||+||+.||........ .+............. ..
T Consensus 165 ~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (296)
T 4hgt_A 165 QHIPYRENKNLTGTARYASINTHL-GIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 243 (296)
T ss_dssp CBCCCCCSCCCCSCGGGCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHT
T ss_pred ccCCCCcccccCCCccccchHHhc-CCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhhh
Confidence 236889999999955 46799999999999999999999999986443221 122222221111100 00
Q ss_pred cccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 534 EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 534 ~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
..++ ..+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 244 ~~~~-------------~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~ 279 (296)
T 4hgt_A 244 KGYP-------------SEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 279 (296)
T ss_dssp TTSC-------------HHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHH
T ss_pred ccCC-------------HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHH
Confidence 1112 24556888899999999999999999999874
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-28 Score=247.49 Aligned_cols=223 Identities=24% Similarity=0.323 Sum_probs=160.4
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCC--ceeEe
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAND--EKLLI 423 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~--~~~lV 423 (584)
..+.||+|+||.||+++..... ....+.||||++... .....+.|.+|++++++++||||+++++++...+ ..++|
T Consensus 45 ~~~~lg~G~~g~V~~~~~~~~~-~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 122 (326)
T 2w1i_A 45 FLQQLGKGNFGSVEMCRYDPLQ-DNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLI 122 (326)
T ss_dssp EEEEEECCSSEEEEEEEECTTS-SSCCEEEEEEEESSC-CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEE
T ss_pred eeeeeccCCCeEEEEEEecccc-CCCceEEEEEEeccC-CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEE
Confidence 3578999999999999853210 111289999999864 3344578999999999999999999999987654 78999
Q ss_pred eecccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc---------
Q 007935 424 SDFIRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI--------- 466 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~--------- 466 (584)
|||+++|+|.+++.. . -|+++.+.|+.+..++.++..+++...
T Consensus 123 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~~ 202 (326)
T 2w1i_A 123 MEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYY 202 (326)
T ss_dssp ECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCSSCSEE
T ss_pred EECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcchhhcccccccc
Confidence 999999999877643 2 357788888888777788887776432
Q ss_pred -----ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCC----------CCCCcHHHHHHHHhhcC--
Q 007935 467 -----SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPE----------NDGKGLESLVRKAFRER-- 529 (584)
Q Consensus 467 -----~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~----------~~~~~l~~~~~~~~~~~-- 529 (584)
..++..|+|||++.. ..++.++|||||||++|||+||+.|+.... .........+.......
T Consensus 203 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (326)
T 2w1i_A 203 KVKEPGESPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 281 (326)
T ss_dssp ECSSCCSCCGGGCCHHHHHH-CEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCC
T ss_pred ccccCCCCceeEECchhhcC-CCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCC
Confidence 235667999998554 578999999999999999999999876320 00000110111111111
Q ss_pred CCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhcC
Q 007935 530 RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKLQ 584 (584)
Q Consensus 530 ~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~ 584 (584)
.+.+..++ ..+.+++.+||+.||++|||+.|+++.|++++++
T Consensus 282 ~~~~~~~~-------------~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 282 LPRPDGCP-------------DEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp CCCCTTCC-------------HHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCccc-------------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 11122222 2455688889999999999999999999998753
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.7e-29 Score=252.43 Aligned_cols=225 Identities=11% Similarity=0.093 Sum_probs=154.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcch----------hhHhHHHHHHHHHhcCCCceeeeeEEEEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATW----------RFKDFESEVEAIARVQHPNIVRLKAFYYA 416 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~----------~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~ 416 (584)
.+.||+|+||.||+|....++. ....||||+........ ..+.+.+|+..++.++||||+++++++.+
T Consensus 42 ~~~lg~G~~g~Vy~~~~~~~~~--~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~ 119 (345)
T 2v62_A 42 GKKIGSGGFGLIYLAFPTNKPE--KDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLT 119 (345)
T ss_dssp EEEC------CEEEEEESSSCG--GGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEE
T ss_pred EeeEeecCCeEEEEEEecCCCC--ccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeeccccc
Confidence 4689999999999999876211 11789999987653211 12457789999999999999999999988
Q ss_pred ----CCceeEeeecccCCcHHHHHh-------------------------cc--cccccCCCCccccccC--eEEecCCC
Q 007935 417 ----NDEKLLISDFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNE--TIVTSGTG 463 (584)
Q Consensus 417 ----~~~~~lV~Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~--~~~~~~~~ 463 (584)
.+..++||||+ +|+|.+++. +. -|+++++.|+.+..+. .++..+||
T Consensus 120 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kL~Dfg 198 (345)
T 2v62_A 120 EFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYG 198 (345)
T ss_dssp ESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTSEEECCCT
T ss_pred ccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcEEEEeCC
Confidence 67899999999 999976654 33 3677888888777665 77777776
Q ss_pred cc------------------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHH
Q 007935 464 SR------------------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKA 525 (584)
Q Consensus 464 ~~------------------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~ 525 (584)
.. ...||..|+|||++. +..++.++|||||||++|||+||+.||.....+....... ...
T Consensus 199 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~-~~~ 276 (345)
T 2v62_A 199 LSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHK-GVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTA-KTN 276 (345)
T ss_dssp TCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHH-TCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHH-HHH
T ss_pred CceecccccccccchhccccccCCCccccCHHHhc-CCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHH-HHh
Confidence 43 236899999999955 4689999999999999999999999996432221111111 111
Q ss_pred hhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 526 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 526 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
..... + +.+............+.+++.+||+.||++|||+.+|++.|+++.
T Consensus 277 ~~~~~--~----~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 327 (345)
T 2v62_A 277 LLDEL--P----QSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG 327 (345)
T ss_dssp HHHTT--T----HHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred hcccc--c----HHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence 11111 1 111100000012235667888899999999999999999998764
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.8e-28 Score=248.54 Aligned_cols=222 Identities=14% Similarity=0.158 Sum_probs=157.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC--------
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN-------- 417 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~-------- 417 (584)
.+.||+|+||.||+|+...++ +.||||++.... .......+.+|++++++++|||||++++++.+.
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 22 LAKIGQGTFGEVFKARHRKTG-----QKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp EEECSSCSTTSEEEEEETTTC-----CEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred EEEEecCCCcEEEEEEECCCC-----CEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 467999999999999987665 899999987652 222346789999999999999999999999873
Q ss_pred CceeEeeecccCCcHH--------------------------HHHhccc--ccccCCCCccccccCeEEecCCCccc---
Q 007935 418 DEKLLISDFIRNGSLY--------------------------AALHGFG--LNRLLPGTSKVTKNETIVTSGTGSRI--- 466 (584)
Q Consensus 418 ~~~~lV~Ey~~~GsL~--------------------------~~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~--- 466 (584)
+..++||||+++ +|. .|||+.| |++++++|+.+..++.++..|+|...
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~ 175 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFS 175 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred ceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhccccc
Confidence 468999999985 553 3445444 67888888888878888888876431
Q ss_pred ------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC-CCc
Q 007935 467 ------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR-PLS 533 (584)
Q Consensus 467 ------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~ 533 (584)
..||+.|+|||++.....++.++|||||||++|||+||+.||.+... ......+........ ...
T Consensus 176 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~~ 253 (351)
T 3mi9_A 176 LAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTE--QHQLALISQLCGSITPEVW 253 (351)
T ss_dssp CCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCCCCTTTS
T ss_pred ccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHHhCCCChhhc
Confidence 35788999999865545689999999999999999999999975321 111111222111110 000
Q ss_pred cccC---------------hhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 534 EVID---------------PALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 534 ~~~d---------------~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
...+ ..+............+.+++.+||+.||++|||+.|+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 254 PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp TTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 0000 000000000011234678999999999999999999985
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.9e-28 Score=242.89 Aligned_cols=215 Identities=21% Similarity=0.284 Sum_probs=153.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|++....+ ....||||+++... .....+.|.+|++++++++||||+++++++.+++ .++||
T Consensus 23 ~~~lg~G~~g~Vy~~~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~v~ 99 (291)
T 1u46_A 23 LEKLGDGSFGVVRRGEWDAPSG--KTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVT 99 (291)
T ss_dssp EEECC----CCCEEEEEECTTS--CEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEEEE
T ss_pred eeeecCCCceeEEEEEeccCCC--ceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ceeeE
Confidence 4679999999999998654321 11579999997642 3344578999999999999999999999997654 89999
Q ss_pred ecccCCcHHHHHh--------------------------cc--cccccCCCCccccccCeEEecCCCccc----------
Q 007935 425 DFIRNGSLYAALH--------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 425 Ey~~~GsL~~~L~--------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
||+++|+|.+++. +. -|+++.+.|+.+..++.++..+++...
T Consensus 100 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 179 (291)
T 1u46_A 100 ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV 179 (291)
T ss_dssp ECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEE
T ss_pred ecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEccccccccccccccchh
Confidence 9999999976664 22 367788888888777888887776422
Q ss_pred ----ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCC--CccccChh
Q 007935 467 ----SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP--LSEVIDPA 539 (584)
Q Consensus 467 ----~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~d~~ 539 (584)
..+|..|+|||++.. ..++.++||||||+++|||++ |+.||... ............... ....+++
T Consensus 180 ~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~~g~~p~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~- 252 (291)
T 1u46_A 180 MQEHRKVPFAWCAPESLKT-RTFSHASDTWMFGVTLWEMFTYGQEPWIGL-----NGSQILHKIDKEGERLPRPEDCPQ- 252 (291)
T ss_dssp C-----CCGGGCCHHHHHH-CEEEHHHHHHHHHHHHHHHHTTSCCTTTTC-----CHHHHHHHHHTSCCCCCCCTTCCH-
T ss_pred hhccCCCCceeeCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCcccC-----CHHHHHHHHHccCCCCCCCcCcCH-
Confidence 245678999999554 678999999999999999999 99999743 223333333332211 1122222
Q ss_pred hhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 540 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
.+.+++.+||+.||++|||+.++++.|++++.
T Consensus 253 ------------~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 284 (291)
T 1u46_A 253 ------------DIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 284 (291)
T ss_dssp ------------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred ------------HHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence 45567888999999999999999999998754
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-28 Score=243.92 Aligned_cols=207 Identities=16% Similarity=0.254 Sum_probs=147.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHh-HHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKD-FESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~-f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|+....+ +.||||+++.........+ +.+|...++.++||||+++++++.+++..++|||
T Consensus 12 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e 86 (290)
T 3fme_A 12 IMELGRGAYGVVEKMRHVPSG-----QIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICME 86 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTT-----EEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEE
T ss_pred HHhcCCCCCeEEEEEEecCCC-----eEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEe
Confidence 467999999999999987665 8999999987533332233 4445556888899999999999999999999999
Q ss_pred cccCCcHHH-----------------------------HHhcc---cccccCCCCccccccCeEEecCCCccc-------
Q 007935 426 FIRNGSLYA-----------------------------ALHGF---GLNRLLPGTSKVTKNETIVTSGTGSRI------- 466 (584)
Q Consensus 426 y~~~GsL~~-----------------------------~L~~~---g~~~~~~~~~~i~~~~~~~~~~~~~~~------- 466 (584)
|+++ +|.+ |||.. .|+++++.|+.+..+..++..++|...
T Consensus 87 ~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 165 (290)
T 3fme_A 87 LMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVA 165 (290)
T ss_dssp CCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC-----------
T ss_pred hhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCccccccccc
Confidence 9984 6643 34543 367788888888777888888876432
Q ss_pred ---ccCCCcccCcccc---ccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC-CC-ccccCh
Q 007935 467 ---SAISNVYLAPEAR---IYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR-PL-SEVIDP 538 (584)
Q Consensus 467 ---~~gt~~y~aPE~~---~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~-~~-~~~~d~ 538 (584)
..||+.|+|||++ ..+..++.++|||||||++|||+||+.||..... .... ......... .. ...+++
T Consensus 166 ~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~ 241 (290)
T 3fme_A 166 KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT---PFQQ-LKQVVEEPSPQLPADKFSA 241 (290)
T ss_dssp ----CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSC---HHHH-HHHHHHSCCCCCCTTTSCH
T ss_pred ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCc---hHHH-HHHHhccCCCCcccccCCH
Confidence 3689999999985 2445789999999999999999999999974222 1222 222222221 11 112222
Q ss_pred hhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 539 ALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 539 ~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||+.||++|||+.|+++
T Consensus 242 -------------~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 242 -------------EFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp -------------HHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -------------HHHHHHHHHhhcChhhCcCHHHHHh
Confidence 3456777899999999999999986
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=99.95 E-value=4.9e-28 Score=240.49 Aligned_cols=213 Identities=14% Similarity=0.114 Sum_probs=157.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEE-EeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFY-YANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~-~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|+....+ +.||||++...... +++.+|+.++++++|++++..++++ .+.+..++|||
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~---~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 14 GRKIGSGSFGDIYLGTDIAAG-----EEVAIKLECVKTKH---PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp EEEEEEETTEEEEEEEETTTT-----EEEEEEEEESCSSC---CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred EEEEccCCCeEEEEEEEcCCC-----cEEEEEEecCCcch---hHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 467999999999999986655 89999998764322 5789999999999998877777666 45667899999
Q ss_pred cccCCcHHHHHh--------------------------cc--cccccCCCCcccc---ccCeEEecCCCcc---------
Q 007935 426 FIRNGSLYAALH--------------------------GF--GLNRLLPGTSKVT---KNETIVTSGTGSR--------- 465 (584)
Q Consensus 426 y~~~GsL~~~L~--------------------------~~--g~~~~~~~~~~i~---~~~~~~~~~~~~~--------- 465 (584)
|+ +|+|.++++ +. .|+++++.|+.+. .+..++..++|..
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 164 (296)
T 3uzp_A 86 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 164 (296)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred ec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccc
Confidence 99 899976664 22 3677888888773 5566777777632
Q ss_pred ---------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCC--CcHHHHHHHHhhcCCC-Cc
Q 007935 466 ---------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDG--KGLESLVRKAFRERRP-LS 533 (584)
Q Consensus 466 ---------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~--~~l~~~~~~~~~~~~~-~~ 533 (584)
...||..|+|||++. +..++.++|||||||++|||+||+.||....... ..+............+ +.
T Consensus 165 ~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (296)
T 3uzp_A 165 QHIPYRENKNLTGTARYASINTHL-GIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 243 (296)
T ss_dssp CBCCCCCSCCCCSCTTTCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHT
T ss_pred cccccccccccccccccCChhhhc-CCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHHHH
Confidence 236889999999955 4679999999999999999999999998643321 1222222222211100 00
Q ss_pred cccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 534 EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 534 ~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
..++ ..+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 244 ~~~~-------------~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 279 (296)
T 3uzp_A 244 KGYP-------------SEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 279 (296)
T ss_dssp TTSC-------------HHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHH
T ss_pred hhCC-------------HHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHH
Confidence 1122 24556888899999999999999999999874
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.4e-28 Score=243.02 Aligned_cols=203 Identities=16% Similarity=0.268 Sum_probs=152.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|....++ +.||||.+..... .+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 34 ~~~lg~G~~g~Vy~~~~~~~~-----~~vaiK~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 105 (314)
T 3com_A 34 LEKLGEGSYGSVYKAIHKETG-----QIVAIKQVPVESD---LQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEY 105 (314)
T ss_dssp EEECC----CEEEEEEETTTC-----CEEEEEEEETTSC---CHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred heeeccCCCeEEEEEEECCCC-----CEEEEEecCchHH---HHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeec
Confidence 467999999999999987755 8999999976432 37899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHh--------------------------cc--cccccCCCCccccccCeEEecCCCcc-----------cc
Q 007935 427 IRNGSLYAALH--------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR-----------IS 467 (584)
Q Consensus 427 ~~~GsL~~~L~--------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~ 467 (584)
+++|+|.+++. .. -|.++.+.|+.+..++.++..+++.. ..
T Consensus 106 ~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 185 (314)
T 3com_A 106 CGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTV 185 (314)
T ss_dssp CTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBCCC
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccCcc
Confidence 99999977664 22 35677778887777777888777643 23
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC---CccccChhhhhhh
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP---LSEVIDPALVKEI 544 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~d~~~~~~~ 544 (584)
.||..|+|||++.. ..++.++||||||+++|||++|+.||.... .............+ ....+++
T Consensus 186 ~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~------ 253 (314)
T 3com_A 186 IGTPFWMAPEVIQE-IGYNCVADIWSLGITAIEMAEGKPPYADIH-----PMRAIFMIPTNPPPTFRKPELWSD------ 253 (314)
T ss_dssp CSCGGGCCHHHHSS-SCBCTTHHHHHHHHHHHHHHHSSCTTTTSC-----HHHHHHHHHHSCCCCCSSGGGSCH------
T ss_pred CCCCCccChhhcCC-CCCCccccHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHhcCCCcccCCcccCCH------
Confidence 57889999999544 678999999999999999999999997422 11111111111111 1122222
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||+.||.+|||+.|+++
T Consensus 254 -------~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 254 -------NFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp -------HHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred -------HHHHHHHHHccCChhhCcCHHHHHh
Confidence 3456788899999999999999975
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=99.95 E-value=4.9e-28 Score=244.49 Aligned_cols=221 Identities=15% Similarity=0.188 Sum_probs=156.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcC-CCceeeeeEEEEe--CCceeEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-HPNIVRLKAFYYA--NDEKLLI 423 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~-HpnIV~l~g~~~~--~~~~~lV 423 (584)
.+.||+|+||.||+|+...++ +.||||+++... .+.+.+|++++++++ ||||+++++++.+ ....++|
T Consensus 41 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv 111 (330)
T 3nsz_A 41 VRKLGRGKYSEVFEAINITNN-----EKVVVKILKPVK----KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 111 (330)
T ss_dssp EEEEEECSSEEEEEEEETTTC-----CEEEEEEECSCC----HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred EEEecccCCeEEEEEEECCCC-----cEEEEEEecccc----hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence 468999999999999987665 899999997532 277999999999997 9999999999998 5678999
Q ss_pred eecccCCcHHHH----------------------Hhccc--ccccCCCCccccccC-eEEecCCCccc----------cc
Q 007935 424 SDFIRNGSLYAA----------------------LHGFG--LNRLLPGTSKVTKNE-TIVTSGTGSRI----------SA 468 (584)
Q Consensus 424 ~Ey~~~GsL~~~----------------------L~~~g--~~~~~~~~~~i~~~~-~~~~~~~~~~~----------~~ 468 (584)
|||+++++|.++ ||+.| |+++++.|+.+..++ .++..|+|... ..
T Consensus 112 ~e~~~~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 191 (330)
T 3nsz_A 112 FEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 191 (330)
T ss_dssp EECCCCCCHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSCC
T ss_pred EeccCchhHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCcccccc
Confidence 999999998544 44444 677888888877555 67777776432 36
Q ss_pred CCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcC-----CCCccccChhhhhh
Q 007935 469 ISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER-----RPLSEVIDPALVKE 543 (584)
Q Consensus 469 gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~-----~~~~~~~d~~~~~~ 543 (584)
||..|+|||++.....++.++|||||||++|||++|+.||.........+.......-... .......++.....
T Consensus 192 ~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (330)
T 3nsz_A 192 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI 271 (330)
T ss_dssp SCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHH
T ss_pred ccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhh
Confidence 8889999999655467899999999999999999999999643222111111111000000 00000001110000
Q ss_pred ---------------hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 544 ---------------IHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 544 ---------------~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.........+.+++.+||+.||++|||++|+++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 272 LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp HCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred hhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 000001245678899999999999999999986
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=8.9e-29 Score=248.65 Aligned_cols=210 Identities=20% Similarity=0.260 Sum_probs=156.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|...+ .||+|.++... .....+.|.+|+.++++++||||+++++++.+.+..++|||
T Consensus 38 ~~~lg~G~~g~V~~~~~~~--------~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e 109 (319)
T 2y4i_B 38 GELIGKGRFGQVYHGRWHG--------EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITS 109 (319)
T ss_dssp CCBCCCSSSSEEEEEEESS--------SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECB
T ss_pred eeEeccCCceEEEEEEEcC--------eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEee
Confidence 4679999999999998753 38999987642 23334678899999999999999999999999999999999
Q ss_pred cccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCcc------------
Q 007935 426 FIRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSR------------ 465 (584)
Q Consensus 426 y~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~------------ 465 (584)
|+++|+|.++++. . .|+++.+.|+.+. ++.++..++|..
T Consensus 110 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~~ 188 (319)
T 2y4i_B 110 LCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRRE 188 (319)
T ss_dssp CCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCEECCCSCCC----------C
T ss_pred cccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEEEeecCCccccccccccccc
Confidence 9999999766642 2 3677888888775 455666676631
Q ss_pred ----cccCCCcccCcccccc--------CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC-C
Q 007935 466 ----ISAISNVYLAPEARIY--------GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP-L 532 (584)
Q Consensus 466 ----~~~gt~~y~aPE~~~~--------~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~-~ 532 (584)
...||..|+|||++.. ...++.++|||||||++|||+||+.||.... .............+ .
T Consensus 189 ~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-----~~~~~~~~~~~~~~~~ 263 (319)
T 2y4i_B 189 DKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQP-----AEAIIWQMGTGMKPNL 263 (319)
T ss_dssp CSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCC-----HHHHHHHHHTTCCCCC
T ss_pred cccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHhccCCCCCC
Confidence 1247889999998543 2357899999999999999999999997422 22233332222211 1
Q ss_pred -ccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 533 -SEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 533 -~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
...+++. +.+++.+||+.||++|||+.|++++|+++..
T Consensus 264 ~~~~~~~~-------------l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~ 302 (319)
T 2y4i_B 264 SQIGMGKE-------------ISDILLFCWAFEQEERPTFTKLMDMLEKLPK 302 (319)
T ss_dssp CCSSCCTT-------------HHHHHHHHHCSSTTTSCCHHHHHHHHTTC--
T ss_pred CcCCCCHH-------------HHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 1122233 3457777999999999999999999998864
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=99.95 E-value=3.7e-28 Score=249.43 Aligned_cols=219 Identities=20% Similarity=0.256 Sum_probs=158.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCce-----
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK----- 420 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~----- 420 (584)
.+.||+|+||.||+|.....+ +.||||++.... .....+.+.+|+.++++++|||||++++++...+..
T Consensus 47 ~~~lG~G~~g~Vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 121 (371)
T 4exu_A 47 PTHVGSGAYGSVCSAIDKRSG-----EKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 121 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTT-----EEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCC
T ss_pred EeEEecCCCeEEEEEEECCCC-----CEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccccee
Confidence 467999999999999988765 899999998652 333357899999999999999999999999887655
Q ss_pred -eEeeecccCCcHHH-----------------------HHhccc--ccccCCCCccccccCeEEecCCCccc--------
Q 007935 421 -LLISDFIRNGSLYA-----------------------ALHGFG--LNRLLPGTSKVTKNETIVTSGTGSRI-------- 466 (584)
Q Consensus 421 -~lV~Ey~~~GsL~~-----------------------~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~-------- 466 (584)
++||||++ |+|.+ |||+.| |+++++.|+.+..+..++..|+|...
T Consensus 122 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~ 200 (371)
T 4exu_A 122 FYLVMPFMQ-TDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTG 200 (371)
T ss_dssp CEEEEECCC-EEHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC--------C
T ss_pred EEEEEcccc-ccHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCcccccccCcCC
Confidence 99999998 57743 445444 67788888888888888888887542
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhc-CCCCcc---ccChh-hh
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE-RRPLSE---VIDPA-LV 541 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~~---~~d~~-~~ 541 (584)
..||+.|+|||++.....++.++|||||||++|||+||+.||.+.. ..+........ ..+..+ .+... ..
T Consensus 201 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 275 (371)
T 4exu_A 201 YVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD-----YLDQLTQILKVTGVPGTEFVQKLNDKAAK 275 (371)
T ss_dssp TTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHHHCCCCHHHHTTCSCHHHH
T ss_pred cccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHHHhCCCcHHHHHHhhhhhhh
Confidence 4689999999986554678999999999999999999999997522 12222221110 000000 00000 00
Q ss_pred hhh-----------h--HHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 542 KEI-----------H--AKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 542 ~~~-----------~--~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
... . .......+.+++.+||+.||++|||+.|+++
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 276 SYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp HHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 000 0 0011245678899999999999999999985
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-28 Score=250.88 Aligned_cols=155 Identities=21% Similarity=0.236 Sum_probs=128.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcC-----CCceeeeeEEEEeCCcee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-----HPNIVRLKAFYYANDEKL 421 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~-----HpnIV~l~g~~~~~~~~~ 421 (584)
.+.||+|+||.||+|+...++ +.||||+++... ...+.+.+|++++.+++ |||||++++++...+..+
T Consensus 40 ~~~lG~G~~g~V~~~~~~~~~-----~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~ 112 (360)
T 3llt_A 40 IRKMGDGTFGRVLLCQHIDNK-----KYYAVKVVRNIK--KYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMC 112 (360)
T ss_dssp EEEEEECSSEEEEEEEETTTC-----CEEEEEEECSCH--HHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEE
T ss_pred EEEEcccCCeEEEEEEECCCC-----eEEEEEEeccch--hhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeE
Confidence 468999999999999987765 899999997532 23367889999999996 999999999999999999
Q ss_pred EeeecccCCcHHHHHh---------------------------cc--cccccCCCCccccc-------------------
Q 007935 422 LISDFIRNGSLYAALH---------------------------GF--GLNRLLPGTSKVTK------------------- 453 (584)
Q Consensus 422 lV~Ey~~~GsL~~~L~---------------------------~~--g~~~~~~~~~~i~~------------------- 453 (584)
+||||+ +|+|.+++. +. -|+++++.|+.+..
T Consensus 113 lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~ 191 (360)
T 3llt_A 113 LIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKI 191 (360)
T ss_dssp EEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEE
T ss_pred EEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhcccccccc
Confidence 999999 899976653 22 36778888877753
Q ss_pred ------cCeEEecCCCccc--------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCC
Q 007935 454 ------NETIVTSGTGSRI--------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAG 510 (584)
Q Consensus 454 ------~~~~~~~~~~~~~--------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~ 510 (584)
+..++..|||... ..||+.|+|||++.. ..++.++|||||||++|||+||+.||..
T Consensus 192 ~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~ 261 (360)
T 3llt_A 192 QIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILN-LGWDVSSDMWSFGCVLAELYTGSLLFRT 261 (360)
T ss_dssp EEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTT-CCCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcC-CCCCCccchHHHHHHHHHHHHCCCCCCC
Confidence 4566777776432 468999999999654 6899999999999999999999999975
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=6.3e-28 Score=239.95 Aligned_cols=211 Identities=18% Similarity=0.246 Sum_probs=158.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc--------chhhHhHHHHHHHHHhcC-CCceeeeeEEEEeC
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA--------TWRFKDFESEVEAIARVQ-HPNIVRLKAFYYAN 417 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~--------~~~~~~f~~Ei~~l~~l~-HpnIV~l~g~~~~~ 417 (584)
.+.||+|+||.||+|....++ +.||||.++.... ....+.+.+|++++++++ ||||+++++++.++
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (298)
T 1phk_A 22 KEILGRGVSSVVRRCIHKPTC-----KEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN 96 (298)
T ss_dssp EEEEEECSSEEEEEEEETTTT-----EEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred eeeecCCCceEEEEEEEcCcC-----ceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccC
Confidence 467999999999999997765 8999999975421 122467889999999995 99999999999999
Q ss_pred CceeEeeecccCCcHHHHHhc-------------------------c--cccccCCCCccccccCeEEecCCCccc----
Q 007935 418 DEKLLISDFIRNGSLYAALHG-------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI---- 466 (584)
Q Consensus 418 ~~~~lV~Ey~~~GsL~~~L~~-------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~---- 466 (584)
+..++||||+++|+|.+++.. . .|.++.+.|+.+..++.++..+++...
T Consensus 97 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 176 (298)
T 1phk_A 97 TFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP 176 (298)
T ss_dssp SEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred CeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccchhhcCC
Confidence 999999999999999776642 2 356777788877777777777776432
Q ss_pred ------ccCCCcccCccccc-----cCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccc
Q 007935 467 ------SAISNVYLAPEARI-----YGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEV 535 (584)
Q Consensus 467 ------~~gt~~y~aPE~~~-----~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 535 (584)
..||..|+|||++. ....++.++||||||+++|||++|+.||... ..................
T Consensus 177 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~-----~~~~~~~~~~~~~~~~~~- 250 (298)
T 1phk_A 177 GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR-----KQMLMLRMIMSGNYQFGS- 250 (298)
T ss_dssp TCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHTCCCCCT-
T ss_pred CcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCc-----cHHHHHHHHhcCCcccCc-
Confidence 35889999999854 2356889999999999999999999999742 122233333322221111
Q ss_pred cChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 536 IDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 536 ~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+... . ....+.+++.+||+.||++|||+.|+++
T Consensus 251 --~~~~-~-----~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 251 --PEWD-D-----YSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp --TTGG-G-----SCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred --cccc-c-----cCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 1100 0 1124556888899999999999999975
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=5.2e-28 Score=241.42 Aligned_cols=206 Identities=21% Similarity=0.294 Sum_probs=153.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC---cchhhHhHHHHHHHHHhcCCCceeeeeEEEE--eCCcee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD---ATWRFKDFESEVEAIARVQHPNIVRLKAFYY--ANDEKL 421 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~---~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~--~~~~~~ 421 (584)
.+.||+|+||.||++.....+ +.||||.++... .....+.+.+|++++++++||||+++++++. +.+..+
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~-----~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (305)
T 2wtk_C 10 GDLLGEGSYGKVKEVLDSETL-----CRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMY 84 (305)
T ss_dssp CCEEEECSSCEEEEEEBTTTC-----CEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEE
T ss_pred eeEEecCCCeEEEEEEECCCC-----cEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEE
Confidence 467999999999999987765 899999997642 1233478999999999999999999999985 345789
Q ss_pred EeeecccCCcHH---------------------------HHHhccc--ccccCCCCccccccCeEEecCCCcc-------
Q 007935 422 LISDFIRNGSLY---------------------------AALHGFG--LNRLLPGTSKVTKNETIVTSGTGSR------- 465 (584)
Q Consensus 422 lV~Ey~~~GsL~---------------------------~~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~------- 465 (584)
+||||+++| |. .+||+.| |+++.+.|+.+..++.++..+++..
T Consensus 85 lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~ 163 (305)
T 2wtk_C 85 MVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFA 163 (305)
T ss_dssp EEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTC
T ss_pred EEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeeccccccccCccc
Confidence 999999987 43 3344444 6777888888877777777777643
Q ss_pred ------cccCCCcccCccccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccCh
Q 007935 466 ------ISAISNVYLAPEARIYG-SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDP 538 (584)
Q Consensus 466 ------~~~gt~~y~aPE~~~~~-~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~ 538 (584)
...||..|+|||++... ..++.++|||||||++|||++|+.||.. ................++..+++
T Consensus 164 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~-----~~~~~~~~~i~~~~~~~~~~~~~ 238 (305)
T 2wtk_C 164 ADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEG-----DNIYKLFENIGKGSYAIPGDCGP 238 (305)
T ss_dssp SSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCC-----SSHHHHHHHHHHCCCCCCSSSCH
T ss_pred cccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCC-----chHHHHHHHHhcCCCCCCCccCH
Confidence 23588999999985432 2347799999999999999999999974 22334444444443333444444
Q ss_pred hhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 539 ALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 539 ~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+ .+++.+||+.||++|||+.|+++
T Consensus 239 ~l-------------~~li~~~l~~dp~~Rps~~~ll~ 263 (305)
T 2wtk_C 239 PL-------------SDLLKGMLEYEPAKRFSIRQIRQ 263 (305)
T ss_dssp HH-------------HHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HH-------------HHHHHHHccCChhhCCCHHHHhc
Confidence 33 45677799999999999999986
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-28 Score=246.05 Aligned_cols=215 Identities=20% Similarity=0.302 Sum_probs=141.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|.....+ +.||||++.........+++.+|++++++++||||+++++++...+..++||||
T Consensus 20 ~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 94 (303)
T 2vwi_A 20 QEVIGSGATAVVQAAYCAPKK-----EKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKL 94 (303)
T ss_dssp EEECC---CCCEEEEEC---------CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEEC
T ss_pred hheeccccceEEEEEEECCCC-----cEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehh
Confidence 467999999999999987654 799999997654344457899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc---------------------------------c--cccccCCCCccccccCeEEecCCCcc------
Q 007935 427 IRNGSLYAALHG---------------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSR------ 465 (584)
Q Consensus 427 ~~~GsL~~~L~~---------------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~------ 465 (584)
+++|+|.+++.. . .|+++.+.|+.+..++.++..+++..
T Consensus 95 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 174 (303)
T 2vwi_A 95 LSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATG 174 (303)
T ss_dssp CTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC--
T ss_pred ccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccchheeccC
Confidence 999999877642 1 35677777777777777777777532
Q ss_pred ----------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC-CCcc
Q 007935 466 ----------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR-PLSE 534 (584)
Q Consensus 466 ----------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~~ 534 (584)
...||+.|+|||++.....++.++|||||||++|||+||+.||...... ... ........ ....
T Consensus 175 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~-~~~~~~~~~~~~~ 249 (303)
T 2vwi_A 175 GDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPM----KVL-MLTLQNDPPSLET 249 (303)
T ss_dssp -------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGG----GHH-HHHHTSSCCCTTC
T ss_pred CCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchh----hHH-HHHhccCCCcccc
Confidence 2358899999998654346899999999999999999999999753221 111 11111111 1111
Q ss_pred -ccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 535 -VIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 535 -~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
..++..... ....+.+++.+||+.||.+|||+.|+++
T Consensus 250 ~~~~~~~~~~-----~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 250 GVQDKEMLKK-----YGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp -----CCCCC-----CCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ccccchhhhh-----hhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 011111111 1124567888899999999999999985
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=99.95 E-value=3.1e-28 Score=249.12 Aligned_cols=219 Identities=18% Similarity=0.237 Sum_probs=149.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC-CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC------Cc
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN------DE 419 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~------~~ 419 (584)
.+.||+|+||.||+|....++ +.||||++... ......+.+.+|++++++++|||||++++++... ..
T Consensus 34 ~~~lG~G~~g~V~~a~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 108 (367)
T 2fst_X 34 LSPVGSGAYGSVCAAFDTKTG-----LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 108 (367)
T ss_dssp EEECC----CCEEEEEETTTT-----EEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred eeEEeecCCeEEEEEEECCCC-----CEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence 467999999999999987765 89999999764 2333457889999999999999999999999764 56
Q ss_pred eeEeeecccCCcHH------------------------HHHhccc--ccccCCCCccccccCeEEecCCCccc-------
Q 007935 420 KLLISDFIRNGSLY------------------------AALHGFG--LNRLLPGTSKVTKNETIVTSGTGSRI------- 466 (584)
Q Consensus 420 ~~lV~Ey~~~GsL~------------------------~~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~------- 466 (584)
.++||||+ +++|. .|||..| |+++++.|+.+..+..++..++|...
T Consensus 109 ~~lv~e~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 187 (367)
T 2fst_X 109 VYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMT 187 (367)
T ss_dssp CEEEEECC-CEECC-----CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC------------
T ss_pred EEEEeccc-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeeccccccccccCC
Confidence 89999999 57774 3445444 67888888888888888888887432
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhc-CCCCc----cccChhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE-RRPLS----EVIDPAL 540 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~----~~~d~~~ 540 (584)
..||..|+|||++.....++.++||||+||++|||+||+.||.+... ...+...... ..+.. ...+...
T Consensus 188 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~l~~i~~~~g~p~~~~~~~~~~~~~ 262 (367)
T 2fst_X 188 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH-----IDQLKLILRLVGTPGAELLKKISSESA 262 (367)
T ss_dssp ---CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHHHHHHCSCCHHHHTTCCCHHH
T ss_pred CcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHhCCCCHHHHHHhhhHHH
Confidence 36899999999866546799999999999999999999999975321 1111111110 00000 0000000
Q ss_pred hhhhh-----------H--HHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 541 VKEIH-----------A--KRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 541 ~~~~~-----------~--~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
..... . ......+.+++.+||+.||++|||+.|+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 263 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp HHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 00000 0 001235678899999999999999999985
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=99.95 E-value=4.3e-28 Score=246.83 Aligned_cols=219 Identities=15% Similarity=0.161 Sum_probs=157.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcch--h--------------hHhHHHHHHHHHhcCCCceeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATW--R--------------FKDFESEVEAIARVQHPNIVRL 410 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~--~--------------~~~f~~Ei~~l~~l~HpnIV~l 410 (584)
.+.||+|+||.||+|.. .+ +.||||++....... . .+.|.+|++++++++||||+++
T Consensus 36 ~~~lg~G~~g~V~~~~~-~~------~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 36 IRTLNQGKFNKIILCEK-DN------KFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp EEEEECCSSCCEEEEEE-TT------EEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred EEEEcCCCCeEEEEEEc-CC------ceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46799999999999998 44 899999997542111 1 1789999999999999999999
Q ss_pred eEEEEeCCceeEeeecccCCcHHH---------------------------------HHhc-cc--ccccCCCCcccccc
Q 007935 411 KAFYYANDEKLLISDFIRNGSLYA---------------------------------ALHG-FG--LNRLLPGTSKVTKN 454 (584)
Q Consensus 411 ~g~~~~~~~~~lV~Ey~~~GsL~~---------------------------------~L~~-~g--~~~~~~~~~~i~~~ 454 (584)
++++.+.+..++||||+++|+|.+ |||+ .| |.++.+.|+.+..+
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~~ 188 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKN 188 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEECTT
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEcCC
Confidence 999999999999999999998744 4454 44 56777788877777
Q ss_pred CeEEecCCCccc---------ccCCCcccCccccccCCCCCC-ccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Q 007935 455 ETIVTSGTGSRI---------SAISNVYLAPEARIYGSKFTQ-KCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRK 524 (584)
Q Consensus 455 ~~~~~~~~~~~~---------~~gt~~y~aPE~~~~~~~~~~-ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~ 524 (584)
..++..+++... ..||..|+|||++..+..++. ++|||||||++|||+||+.||...... ......
T Consensus 189 ~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~~ 264 (348)
T 2pml_X 189 GRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL----VELFNN 264 (348)
T ss_dssp SCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS----HHHHHH
T ss_pred CcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH----HHHHHH
Confidence 788888776432 368899999999655335666 999999999999999999999753321 333333
Q ss_pred HhhcCCCCccccC----hhhhh--hhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 525 AFRERRPLSEVID----PALVK--EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 525 ~~~~~~~~~~~~d----~~~~~--~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
........+.... +.... ..........+.+++.+||+.||.+|||+.|+++
T Consensus 265 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 265 IRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp HTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 3333222221000 00000 0000111235567888899999999999999986
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.3e-28 Score=242.44 Aligned_cols=220 Identities=17% Similarity=0.188 Sum_probs=154.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC----cchhhHhHHHHHHHHHhcC---CCceeeeeEEEEeCC-
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD----ATWRFKDFESEVEAIARVQ---HPNIVRLKAFYYAND- 418 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~----~~~~~~~f~~Ei~~l~~l~---HpnIV~l~g~~~~~~- 418 (584)
.+.||+|+||+||+|+...++ +.||||+++... .......+.+|++++++++ |||||+++++|....
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~ 88 (308)
T 3g33_A 14 VAEIGVGAYGTVYKARDPHSG-----HFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRT 88 (308)
T ss_dssp EEEECCSSSCCEEEEECTTTC-----CEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCS
T ss_pred EEEEecCCCeEEEEEEECCCC-----cEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCC
Confidence 467999999999999987665 899999987432 1112356788888887774 999999999998765
Q ss_pred ----ceeEeeecccCCcHHHHHh---------------------------cc--cccccCCCCccccccCeEEecCCCcc
Q 007935 419 ----EKLLISDFIRNGSLYAALH---------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR 465 (584)
Q Consensus 419 ----~~~lV~Ey~~~GsL~~~L~---------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~ 465 (584)
..++||||+. |+|.+++. .. -|++++++|+.+..++.++..|+|..
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 167 (308)
T 3g33_A 89 DREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLA 167 (308)
T ss_dssp SSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEECSCSCT
T ss_pred CCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEeeCccc
Confidence 4799999997 58866553 33 46888899988888888888888743
Q ss_pred c----------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhc-CCCCcc
Q 007935 466 I----------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE-RRPLSE 534 (584)
Q Consensus 466 ~----------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~~ 534 (584)
. ..||+.|+|||++.. ..++.++|||||||++|||+||+.||.+.... ..+..+....... ....+.
T Consensus 168 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~ 245 (308)
T 3g33_A 168 RIYSYQMALTPVVVTLWYRAPEVLLQ-STYATPVDMWSVGCIFAEMFRRKPLFCGNSEA-DQLGKIFDLIGLPPEDDWPR 245 (308)
T ss_dssp TTSTTCCCSGGGGCCCSSCCHHHHHT-SCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHH-HHHHHHHHHHCCCCTTTSCS
T ss_pred cccCCCcccCCccccccccCchHHcC-CCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCChhhccc
Confidence 2 368999999999654 67999999999999999999999999753211 1111111111000 000000
Q ss_pred cc-------C----hhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 535 VI-------D----PALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 535 ~~-------d----~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.. . ...... ..+....+.+++.+||+.||++|||+.|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 246 DVSLPRGAFPPRGPRPVQSV--VPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp SCSSCGGGSCCCCCCCHHHH--SCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhhccccccCCCCCCcHHHh--CccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 00 0 000000 0011235677899999999999999999985
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=99.95 E-value=7.4e-28 Score=246.61 Aligned_cols=222 Identities=16% Similarity=0.228 Sum_probs=158.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC-----Ccee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN-----DEKL 421 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~-----~~~~ 421 (584)
.+.||+|+||.||+|+...++ +.||||++.........+.+.+|++++++++|||||++++++... ...+
T Consensus 32 ~~~lG~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 106 (364)
T 3qyz_A 32 LSYIGEGAYGMVCSAYDNLNK-----VRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY 106 (364)
T ss_dssp EEEEEECSSEEEEEEEETTTT-----EEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred EEEeecCCCeEEEEEEECCCC-----eEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEE
Confidence 467999999999999987765 899999998654444457899999999999999999999999765 3689
Q ss_pred EeeecccCCcHHHHH------------------------hccc--ccccCCCCccccccCeEEecCCCccc---------
Q 007935 422 LISDFIRNGSLYAAL------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSRI--------- 466 (584)
Q Consensus 422 lV~Ey~~~GsL~~~L------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~--------- 466 (584)
+||||++ |+|.+++ |..| |+++++.|+.+..+..++..|+|...
T Consensus 107 iv~e~~~-~~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~ 185 (364)
T 3qyz_A 107 IVQDLME-TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 185 (364)
T ss_dssp EEEECCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBC
T ss_pred EEEcccC-cCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecCCCCCcc
Confidence 9999998 4886554 4333 67888888888877788888876432
Q ss_pred -----ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC--CccccChh
Q 007935 467 -----SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP--LSEVIDPA 539 (584)
Q Consensus 467 -----~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~d~~ 539 (584)
..||+.|+|||++..+..++.++|||||||++|||+||+.||.+..... .+..+. ........ +....+..
T Consensus 186 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~-~~~~~~~~~~~~~~~~~~ 263 (364)
T 3qyz_A 186 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD-QLNHIL-GILGSPSQEDLNCIINLK 263 (364)
T ss_dssp CTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG-HHHHHH-HHHCSCCHHHHHTCCCHH
T ss_pred ccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH-HHHHHH-HHhCCCCHHHHHHhhhhh
Confidence 2689999999986665668999999999999999999999997533211 111111 11110000 00000000
Q ss_pred hhhh-------------hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 540 LVKE-------------IHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 540 ~~~~-------------~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.... .........+.+++.+||+.||++|||+.|+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 264 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp HHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000 000001235678899999999999999999985
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=99.95 E-value=5.8e-28 Score=240.62 Aligned_cols=207 Identities=21% Similarity=0.285 Sum_probs=150.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEe----------
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYA---------- 416 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~---------- 416 (584)
.+.||+|+||.||+|+...++ +.||||++... ....+.+.+|++++++++||||+++++++.+
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 11 IAVLGQGAFGQVVKARNALDS-----RYYAIKKIRHT--EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp EEEEEECSSEEEEEEEETTTC-----CEEEEEEEEEE--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred hheeccCCcEEEEEEEEcCCC-----eEEEEEEEecc--HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 468999999999999987655 89999999653 2334789999999999999999999999876
Q ss_pred ---CCceeEeeecccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCcc
Q 007935 417 ---NDEKLLISDFIRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSR 465 (584)
Q Consensus 417 ---~~~~~lV~Ey~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~ 465 (584)
.+..++||||+++|+|.++++. . .|+++.+.|+.+..++.++..+++..
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 163 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLA 163 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCCC
T ss_pred cccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeCcch
Confidence 3568999999999999877642 2 35677778877777777777777633
Q ss_pred c-------------------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHH
Q 007935 466 I-------------------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLES 520 (584)
Q Consensus 466 ~-------------------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~ 520 (584)
. ..||..|+|||++.....++.++|||||||++|||++ ||.. ......
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~----~~~~~~ 236 (303)
T 1zy4_A 164 KNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFST----GMERVN 236 (303)
T ss_dssp SCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSS----HHHHHH
T ss_pred hhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCC----chhHHH
Confidence 2 2478889999986544478999999999999999998 5532 111222
Q ss_pred HHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 521 LVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 521 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
...........++..++... ...+.+++.+||+.||++|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~---------~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 237 ILKKLRSVSIEFPPDFDDNK---------MKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HHHHHHSTTCCCCTTCCTTT---------SHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHhccccccccCccccccc---------hHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 23332222222222222221 123456888899999999999999986
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.95 E-value=3.6e-28 Score=247.16 Aligned_cols=222 Identities=16% Similarity=0.212 Sum_probs=154.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcc----hhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeE
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT----WRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLL 422 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~----~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~l 422 (584)
.+.||+|+||.||+|+...++ +.||||++...... ...+.+.+|++++++++|||||++++++.+.+..++
T Consensus 15 ~~~lg~G~~g~Vy~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 89 (346)
T 1ua2_A 15 LDFLGEGQFATVYKARDKNTN-----QIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISL 89 (346)
T ss_dssp EEEEEEETTEEEEEEECSSCC-----SEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEE
T ss_pred EeEEeecCCEEEEEEEECCCC-----cEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEE
Confidence 467999999999999987765 79999999754211 123578899999999999999999999999999999
Q ss_pred eeecccCCcHHHHH--------------------------hcc--cccccCCCCccccccCeEEecCCCccc--------
Q 007935 423 ISDFIRNGSLYAAL--------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSRI-------- 466 (584)
Q Consensus 423 V~Ey~~~GsL~~~L--------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~-------- 466 (584)
||||+++ +|.+++ |+. .|++++++|+.+..++.++..|+|...
T Consensus 90 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~ 168 (346)
T 1ua2_A 90 VFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRA 168 (346)
T ss_dssp EEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCC
T ss_pred EEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceeccCCccc
Confidence 9999986 775444 443 367788888888778888888876432
Q ss_pred ---ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhc-CCCCccccC-----
Q 007935 467 ---SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE-RRPLSEVID----- 537 (584)
Q Consensus 467 ---~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~d----- 537 (584)
..||+.|+|||++.....++.++|||||||++|||++|.+||.+... ...+.......... ....++...
T Consensus 169 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 247 (346)
T 1ua2_A 169 YTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSD-LDQLTRIFETLGTPTEEQWPDMCSLPDYV 247 (346)
T ss_dssp CCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCCCCTTTSSSTTSSTTCC
T ss_pred CCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHHHcCCCChhhhhhhccCcccc
Confidence 36789999999865545689999999999999999999999875321 11111111111100 000000000
Q ss_pred -----hhhh-hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 538 -----PALV-KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 538 -----~~~~-~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+... ... .......+.+++.+||+.||++|||+.|+++
T Consensus 248 ~~~~~~~~~~~~~-~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 291 (346)
T 1ua2_A 248 TFKSFPGIPLHHI-FSAAGDDLLDLIQGLFLFNPCARITATQALK 291 (346)
T ss_dssp CCCCCCCCCHHHH-CTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred cccccCCCChHHh-hccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0000 000 0011245678899999999999999999985
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.6e-28 Score=246.16 Aligned_cols=220 Identities=22% Similarity=0.247 Sum_probs=152.1
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHH--HHhcCCCceeeeeEEEEeC-----Cc
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEA--IARVQHPNIVRLKAFYYAN-----DE 419 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~--l~~l~HpnIV~l~g~~~~~-----~~ 419 (584)
.+.||+|+||.||+|+.. + +.||||++..... +.+..|.++ +..++||||+++++++... ..
T Consensus 18 ~~~lg~G~~g~Vy~~~~~-~------~~vavK~~~~~~~----~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 86 (336)
T 3g2f_A 18 LELIGRGRYGAVYKGSLD-E------RPVAVKVFSFANR----QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86 (336)
T ss_dssp EEEEEECSSEEEEEEEET-T------EEEEEEEEEGGGH----HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred eeecccCCCeEEEEEEEC-C------eEEEEEEeeccch----hhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence 467999999999999773 2 7999999975322 445555555 4458999999999876542 25
Q ss_pred eeEeeecccCCcHHHHH------------------------hcc-----------cccccCCCCccccccCeEEecCCCc
Q 007935 420 KLLISDFIRNGSLYAAL------------------------HGF-----------GLNRLLPGTSKVTKNETIVTSGTGS 464 (584)
Q Consensus 420 ~~lV~Ey~~~GsL~~~L------------------------~~~-----------g~~~~~~~~~~i~~~~~~~~~~~~~ 464 (584)
.++||||+++|+|.+++ |.. .|+++++.|+.+..++.++..|||.
T Consensus 87 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~ 166 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGL 166 (336)
T ss_dssp EEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTT
T ss_pred EEEEEecCCCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccc
Confidence 68999999999996554 533 4677888888888778888888875
Q ss_pred cc-------------------ccCCCcccCccccccC------CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCC---
Q 007935 465 RI-------------------SAISNVYLAPEARIYG------SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGK--- 516 (584)
Q Consensus 465 ~~-------------------~~gt~~y~aPE~~~~~------~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~--- 516 (584)
.. ..||..|+|||++... ..++.++|||||||++|||+||+.||........
T Consensus 167 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~ 246 (336)
T 3g2f_A 167 SMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQM 246 (336)
T ss_dssp CEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCC
T ss_pred eeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHH
Confidence 42 2589999999985431 3566799999999999999999877643222111
Q ss_pred ----------cHHHHHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 517 ----------GLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 517 ----------~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
....+......... ...+.+.... .......+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll 317 (336)
T 3g2f_A 247 AFQTEVGNHPTFEDMQVLVSREKQ--RPKFPEAWKE---NSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELM 317 (336)
T ss_dssp TTHHHHCSSCCHHHHHHHHTTSCC--CCCCCTTCCC---CSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred hhhcccCCCchHHHHHhhhccccc--CCCCCccccc---ccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHH
Confidence 01111111111110 1111111110 1123346788999999999999999999999999875
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=6.7e-28 Score=252.44 Aligned_cols=157 Identities=18% Similarity=0.297 Sum_probs=128.4
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC-CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC-----Cce
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN-----DEK 420 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~-----~~~ 420 (584)
.+.||+|+||.||+|+...++ +.||||+++.. ......+++.+|+++|++++|||||++++++... +..
T Consensus 31 ~~~lG~G~~g~V~~a~~~~~~-----~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 105 (432)
T 3n9x_A 31 KHLIGRGSYGYVYLAYDKNTE-----KNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDEL 105 (432)
T ss_dssp EEEEEEETTEEEEEEEETTTT-----EEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred EEEEeecCCEEEEEEEECCCC-----cEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeE
Confidence 468999999999999988776 89999999765 2333457899999999999999999999999876 568
Q ss_pred eEeeecccCCcHHHHH-------------------------hcc--cccccCCCCccccccCeEEecCCCcc--------
Q 007935 421 LLISDFIRNGSLYAAL-------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSR-------- 465 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~~L-------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~-------- 465 (584)
|+||||++ |+|.+++ |.. -|+++++.|+.+..+..++..|||..
T Consensus 106 ~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~ 184 (432)
T 3n9x_A 106 YIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKD 184 (432)
T ss_dssp EEEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC-----
T ss_pred EEEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCccccccccc
Confidence 99999997 5886554 333 36888889988888888888777633
Q ss_pred -------------------------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCC
Q 007935 466 -------------------------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDA 509 (584)
Q Consensus 466 -------------------------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~ 509 (584)
...||+.|+|||++..+..++.++||||+||++|||++|..||.
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 185 TNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp --------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 23679999999986566779999999999999999998655543
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.3e-28 Score=248.86 Aligned_cols=222 Identities=18% Similarity=0.251 Sum_probs=145.4
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCc-------
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDE------- 419 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~------- 419 (584)
.+.||+|+||.||+|+...++ +.||||++..... ..+.+.+|++.+++++|||||++++++...+.
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~--~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 100 (360)
T 3e3p_A 28 ERMAGQGTFGTVQLGKEKSTG-----MSVAIKKVIQDPR--FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIY 100 (360)
T ss_dssp C----------CEEEEETTTC-----CEEEEEEEECCTT--CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEE
T ss_pred EEEEecCCCeEEEEEEECCCC-----CEEEEEEEecCcc--ccHHHHHHHHHHHhcCCCCcccHHHhhhcccccccccee
Confidence 467999999999999987765 8999999876432 22567889999999999999999999987544
Q ss_pred eeEeeecccCCcH----------------------------HHHHh--ccc--ccccCCCCccccc-cCeEEecCCCccc
Q 007935 420 KLLISDFIRNGSL----------------------------YAALH--GFG--LNRLLPGTSKVTK-NETIVTSGTGSRI 466 (584)
Q Consensus 420 ~~lV~Ey~~~GsL----------------------------~~~L~--~~g--~~~~~~~~~~i~~-~~~~~~~~~~~~~ 466 (584)
.++||||++++.+ ..+|| ..| |+++++.|+.+.. +..++..|||...
T Consensus 101 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~ 180 (360)
T 3e3p_A 101 LNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAK 180 (360)
T ss_dssp EEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEECCCTTCB
T ss_pred EEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEeeCCCce
Confidence 7899999987522 14456 443 6778888888875 6778888887432
Q ss_pred ----------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCC----
Q 007935 467 ----------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPL---- 532 (584)
Q Consensus 467 ----------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~---- 532 (584)
..||+.|+|||++.....++.++|||||||++|||+||+.||.+.... ..+..+.+.........
T Consensus 181 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 259 (360)
T 3e3p_A 181 KLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA-GQLHEIVRVLGCPSREVLRKL 259 (360)
T ss_dssp CCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHHHH
T ss_pred ecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH-HHHHHHHHHcCCCCHHHHHhc
Confidence 367899999998655456899999999999999999999999753211 11111111110000000
Q ss_pred ------ccccC---hhhhhhh--hHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 533 ------SEVID---PALVKEI--HAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 533 ------~~~~d---~~~~~~~--~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
....+ ....... ........+.+++.+||+.||++|||+.|+++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 260 NPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp CTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 00000 0000000 00012346788999999999999999999985
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.6e-28 Score=256.00 Aligned_cols=152 Identities=18% Similarity=0.308 Sum_probs=115.4
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC-CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC-----Cce
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN-----DEK 420 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~-----~~~ 420 (584)
.+.||+|+||.||+|+...++ +.||||++... ......+++.+|+++|++++|||||++++++... +..
T Consensus 58 ~~~lG~G~~g~V~~~~~~~~~-----~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 58 RHLIGTGSYGHVCEAYDKLEK-----RVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp CCC-------CEEEEEECC-------CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred eeEeeecCCeEEEEEEECCCC-----cEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 467999999999999987765 89999999764 2333457899999999999999999999999543 568
Q ss_pred eEeeecccCCcHHHHH-------------------------hcc--cccccCCCCccccccCeEEecCCCccc-------
Q 007935 421 LLISDFIRNGSLYAAL-------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSRI------- 466 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~~L-------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~------- 466 (584)
|+||||+. |+|.+++ |.. .|+|++++|+.+..+..++..|||...
T Consensus 133 ~lv~e~~~-~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~ 211 (458)
T 3rp9_A 133 YVVLEIAD-SDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPEN 211 (458)
T ss_dssp EEEECCCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTT
T ss_pred EEEEeccc-cchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhccCccc
Confidence 99999985 6775444 443 468889999888888888888887432
Q ss_pred -------------------------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhC
Q 007935 467 -------------------------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTG 504 (584)
Q Consensus 467 -------------------------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG 504 (584)
.+||+.|+|||++..+..|+.++|||||||++|||+||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 212 GNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp CCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred cccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 25699999999865656799999999999999999993
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=99.95 E-value=8.4e-28 Score=248.58 Aligned_cols=218 Identities=20% Similarity=0.308 Sum_probs=152.1
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCc------
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDE------ 419 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~------ 419 (584)
..++||+|+||.||+|+...+ ..||+|++..... ...+|++++++++|||||++++++...+.
T Consensus 44 ~~~~lG~G~~g~V~~a~~~~~------~~~aikk~~~~~~-----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~ 112 (394)
T 4e7w_A 44 NCKVIGNGSFGVVFQAKLVES------DEVAIKKVLQDKR-----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVF 112 (394)
T ss_dssp EEEEEEEETTEEEEEEEETTT------EEEEEEEEECCTT-----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEE
T ss_pred EeEEEeeCCCeEEEEEEECCC------CeEEEEEEecCcc-----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceE
Confidence 356899999999999998877 5699998865322 23479999999999999999999976544
Q ss_pred eeEeeecccCCcH----------------------------HHHHhccc--ccccCCCCcccc-ccCeEEecCCCccc--
Q 007935 420 KLLISDFIRNGSL----------------------------YAALHGFG--LNRLLPGTSKVT-KNETIVTSGTGSRI-- 466 (584)
Q Consensus 420 ~~lV~Ey~~~GsL----------------------------~~~L~~~g--~~~~~~~~~~i~-~~~~~~~~~~~~~~-- 466 (584)
.++||||++++.+ ..|||..| |+++++.|+.+. .++.++..|||...
T Consensus 113 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~ 192 (394)
T 4e7w_A 113 LNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL 192 (394)
T ss_dssp EEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccc
Confidence 7899999987543 24455554 678888888887 56778888887542
Q ss_pred --------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhh-----------
Q 007935 467 --------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR----------- 527 (584)
Q Consensus 467 --------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~----------- 527 (584)
..||+.|+|||++.....++.++|||||||++|||++|+.||.+.... ..+..+....-.
T Consensus 193 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~l~~i~~~~g~p~~~~~~~~~~ 271 (394)
T 4e7w_A 193 IAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGI-DQLVEIIKVLGTPSREQIKTMNP 271 (394)
T ss_dssp CTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHHHHCG
T ss_pred cCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHHhhCh
Confidence 367889999998655456999999999999999999999999753211 111111111000
Q ss_pred c--CCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 528 E--RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 528 ~--~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
. ...++..-...+... ........+.+++.+||+.||++|||+.|+++
T Consensus 272 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 272 NYMEHKFPQIRPHPFSKV-FRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp GGSSSCCCCCCCCCHHHH-SCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred hhhhhccccccCCcHHHh-ccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 0 000001000000000 00011235678899999999999999999985
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=9.2e-28 Score=244.87 Aligned_cols=222 Identities=18% Similarity=0.231 Sum_probs=157.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC-----Ccee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN-----DEKL 421 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~-----~~~~ 421 (584)
.+.||+|+||.||+|+....+ +.||||++...........+.+|++++++++||||+++++++... ...+
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 90 (353)
T 2b9h_A 16 KSLLGEGAYGVVCSATHKPTG-----EIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVY 90 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTT-----EEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEE
T ss_pred eeEEcCCCCeEEEEEEECCCC-----cEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEE
Confidence 467999999999999988665 899999997654444457889999999999999999999998764 6789
Q ss_pred EeeecccCCcHHHHH------------------------hcc--cccccCCCCccccccCeEEecCCCccc---------
Q 007935 422 LISDFIRNGSLYAAL------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSRI--------- 466 (584)
Q Consensus 422 lV~Ey~~~GsL~~~L------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~--------- 466 (584)
+||||++ |+|.+++ |+. .|+++++.|+.+..+..++..++|...
T Consensus 91 lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~ 169 (353)
T 2b9h_A 91 IIQELMQ-TDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADN 169 (353)
T ss_dssp EEECCCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC------
T ss_pred EEEeccC-ccHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEecccccccccccccc
Confidence 9999997 5886544 443 367788888888777778887776432
Q ss_pred ------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC---C
Q 007935 467 ------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR---P 531 (584)
Q Consensus 467 ------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~---~ 531 (584)
..||..|+|||++..+..++.++|||||||++|||++|+.||.+.... .....+........ .
T Consensus 170 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~ 247 (353)
T 2b9h_A 170 SEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR--HQLLLIFGIIGTPHSDND 247 (353)
T ss_dssp ----------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCCCCSTTT
T ss_pred cCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcH--HHHHHHHHHhCCCchhcc
Confidence 257889999998665567899999999999999999999999753211 01111111111000 0
Q ss_pred CccccChhhhhhhh-------------HHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 532 LSEVIDPALVKEIH-------------AKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 532 ~~~~~d~~~~~~~~-------------~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.....++....... .......+.+++.+||+.||++|||+.|+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 248 LRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp TTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00000010000000 0011235678899999999999999999985
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-27 Score=242.23 Aligned_cols=217 Identities=20% Similarity=0.262 Sum_probs=156.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCc------
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDE------ 419 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~------ 419 (584)
.+.||+|+||.||+|.....+ +.||||++.... .....+.+.+|+.++++++|||||++++++...+.
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 29 PTHVGSGAYGSVCSAIDKRSG-----EKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTT-----EEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred eeeEecCCCeEEEEEEECCCC-----CEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 467999999999999987765 899999997652 23334788999999999999999999999987654
Q ss_pred eeEeeecccCCcHH-----------------------HHHhccc--ccccCCCCccccccCeEEecCCCccc--------
Q 007935 420 KLLISDFIRNGSLY-----------------------AALHGFG--LNRLLPGTSKVTKNETIVTSGTGSRI-------- 466 (584)
Q Consensus 420 ~~lV~Ey~~~GsL~-----------------------~~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~-------- 466 (584)
.++||||++ |+|. .|||..| |+++.+.|+.+..++.++..++|...
T Consensus 104 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 182 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTG 182 (353)
T ss_dssp CEEEEECCS-EEGGGTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC-------
T ss_pred EEEEecccc-CCHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCCCCCccc
Confidence 499999997 5763 4556554 67788888888777888888887542
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhc-CCC--------------
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE-RRP-------------- 531 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~-~~~-------------- 531 (584)
..||..|+|||++.....++.++|||||||++|||+||+.||.+... .......... ..+
T Consensus 183 ~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-----~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 257 (353)
T 3coi_A 183 YVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY-----LDQLTQILKVTGVPGTEFVQKLNDKAAK 257 (353)
T ss_dssp -CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCH-----HHHHHHHHHHHCBCCHHHHTTCSCHHHH
T ss_pred cccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHhCCCCHHHHHHHhhHHHH
Confidence 36899999999865546789999999999999999999999975321 1111111110 000
Q ss_pred -----CccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 532 -----LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 532 -----~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
++....+.+.... ......+.+++.+||+.||++|||+.|+++
T Consensus 258 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 258 SYIQSLPQTPRKDFTQLF--PRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp HHHHTSCBCSSCCTTTTC--TTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHhCcCCCCccHHHhc--CCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0000000000000 011235667888899999999999999985
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=99.95 E-value=7.1e-28 Score=251.22 Aligned_cols=217 Identities=22% Similarity=0.344 Sum_probs=149.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCC------ce
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAND------EK 420 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~------~~ 420 (584)
.++||+|+||.||+|+....+ +.||||++.... +.+.+|++++++++|||||+++++|...+ ..
T Consensus 59 ~~~lG~G~fg~Vy~~~~~~~~-----~~vaiK~~~~~~-----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~ 128 (420)
T 1j1b_A 59 TKVIGNGSFGVVYQAKLCDSG-----ELVAIKKVLQDK-----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 128 (420)
T ss_dssp EEEEEECSSEEEEEEEETTTC-----CEEEEEEEECCT-----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEE
T ss_pred eeEEeeCCCEEEEEEEECCCC-----cEEEEEEecccc-----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeE
Confidence 468999999999999997765 899999997532 23457999999999999999999986532 26
Q ss_pred eEeeecccCCcHH-----------------------------HHHhccc--ccccCCCCcccccc-CeEEecCCCccc--
Q 007935 421 LLISDFIRNGSLY-----------------------------AALHGFG--LNRLLPGTSKVTKN-ETIVTSGTGSRI-- 466 (584)
Q Consensus 421 ~lV~Ey~~~GsL~-----------------------------~~L~~~g--~~~~~~~~~~i~~~-~~~~~~~~~~~~-- 466 (584)
++||||+++ +|. .|||..| |+++++.|+.+..+ ..++..|||...
T Consensus 129 ~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~ 207 (420)
T 1j1b_A 129 NLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207 (420)
T ss_dssp EEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred Eeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhhhhc
Confidence 799999986 432 3455544 67888888887754 456777877432
Q ss_pred --------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHh-------h-cC-
Q 007935 467 --------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF-------R-ER- 529 (584)
Q Consensus 467 --------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~-------~-~~- 529 (584)
..||+.|+|||++.....++.++|||||||++|||++|+.||.+.... ..+..++...- . ..
T Consensus 208 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~-~~l~~i~~~lg~p~~~~~~~~~~ 286 (420)
T 1j1b_A 208 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGTPTREQIREMNP 286 (420)
T ss_dssp CTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCSCCHHHHHHHCS
T ss_pred ccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHHhhCh
Confidence 368999999998655457999999999999999999999999753211 11222221100 0 00
Q ss_pred ----CCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 530 ----RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 530 ----~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
..++......+.... .......+.+|+.+||+.||++|||+.|+++
T Consensus 287 ~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 287 NYTEFKFPQIKAHPWTKVF-RPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp CCCCCCCCCCCCCCHHHHS-CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhhhhccCccCCCCHHHhc-CCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 000110000000000 0011235678899999999999999999985
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=2e-27 Score=239.52 Aligned_cols=205 Identities=17% Similarity=0.233 Sum_probs=152.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEe------CCc
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYA------NDE 419 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~------~~~ 419 (584)
.+.||+|+||.||+|+....+ +.||||++...... .+.+.+|+.+++++ +||||+++++++.. .+.
T Consensus 29 ~~~lg~G~~g~Vy~~~~~~~~-----~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~ 101 (326)
T 2x7f_A 29 VELVGNGTYGQVYKGRHVKTG-----QLAAIKVMDVTGDE--EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQ 101 (326)
T ss_dssp EEEEEEETTEEEEEEEETTTC-----CEEEEEEEECCSST--THHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCE
T ss_pred EEEeccCCCEEEEEEEECCCC-----CeEEEEEEecCccc--HHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccce
Confidence 468999999999999987665 79999999764332 37899999999999 89999999999987 467
Q ss_pred eeEeeecccCCcHHHHHhc---------------------------c--cccccCCCCccccccCeEEecCCCccc----
Q 007935 420 KLLISDFIRNGSLYAALHG---------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI---- 466 (584)
Q Consensus 420 ~~lV~Ey~~~GsL~~~L~~---------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~---- 466 (584)
.++||||+++|+|.+++.. . .|.++.+.|+.+..++.++..+++...
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 181 (326)
T 2x7f_A 102 LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR 181 (326)
T ss_dssp EEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCTTTC----
T ss_pred EEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEeeCcCceecCc
Confidence 8999999999999777642 2 356777788877777778888876432
Q ss_pred -------ccCCCcccCcccccc----CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC--Cc
Q 007935 467 -------SAISNVYLAPEARIY----GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP--LS 533 (584)
Q Consensus 467 -------~~gt~~y~aPE~~~~----~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~--~~ 533 (584)
..||..|+|||++.. +..++.++|||||||++|||+||+.||.... .............+ ..
T Consensus 182 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~ 256 (326)
T 2x7f_A 182 TVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH-----PMRALFLIPRNPAPRLKS 256 (326)
T ss_dssp ---------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSC-----HHHHHHHHHHSCCCCCSC
T ss_pred CccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCc-----HHHHHHHhhcCccccCCc
Confidence 358899999998642 3568999999999999999999999997422 11222222222111 11
Q ss_pred cccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 534 EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 534 ~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
..+++ .+.+++.+||+.||.+|||+.|+++
T Consensus 257 ~~~~~-------------~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 257 KKWSK-------------KFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp SCSCH-------------HHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred cccCH-------------HHHHHHHHHhccChhhCCCHHHHhh
Confidence 22222 3445777899999999999999986
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.1e-27 Score=233.72 Aligned_cols=210 Identities=20% Similarity=0.312 Sum_probs=157.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|+....+ +.||||++.... .....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~-----~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 101 (287)
T 2wei_A 27 VCMLGKGSFGEVLKCKDRITQ-----QEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE 101 (287)
T ss_dssp EEEEEEETTEEEEEEEETTTC-----CEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred eEEEcCCCCEEEEEEEEcCCC-----cEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEE
Confidence 468999999999999987655 799999997642 23345789999999999999999999999999999999999
Q ss_pred cccCCcHHHHH-------------------------hcc--cccccCCCCcccccc---CeEEecCCCccc---------
Q 007935 426 FIRNGSLYAAL-------------------------HGF--GLNRLLPGTSKVTKN---ETIVTSGTGSRI--------- 466 (584)
Q Consensus 426 y~~~GsL~~~L-------------------------~~~--g~~~~~~~~~~i~~~---~~~~~~~~~~~~--------- 466 (584)
|+++++|.+++ |.. -|.++.+.|+.+..+ ..++..+++...
T Consensus 102 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~~~ 181 (287)
T 2wei_A 102 LYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMK 181 (287)
T ss_dssp CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSSCS
T ss_pred ccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCCccc
Confidence 99999996655 333 356677777766443 246677776432
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCc----cccChhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLS----EVIDPALV 541 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~----~~~d~~~~ 541 (584)
..||..|+|||++ .+ .++.++||||||+++|||++|+.||... ................. ..+++
T Consensus 182 ~~~~~~~y~aPE~~-~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~--- 251 (287)
T 2wei_A 182 DRIGTAYYIAPEVL-RG-TYDEKCDVWSAGVILYILLSGTPPFYGK-----NEYDILKRVETGKYAFDLPQWRTISD--- 251 (287)
T ss_dssp CHHHHHTTCCHHHH-TT-CCCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHCCCCCCSGGGTTSCH---
T ss_pred cccCcccccChHHh-cC-CCCCchhhHhHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHcCCCCCCchhhhhcCH---
Confidence 2467789999984 43 5899999999999999999999999752 22333333333222111 11222
Q ss_pred hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH--HHHhh
Q 007935 542 KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE--SLDRV 581 (584)
Q Consensus 542 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~--~L~~i 581 (584)
.+.+++.+||+.||++|||+.|+++ .+++.
T Consensus 252 ----------~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~ 283 (287)
T 2wei_A 252 ----------DAKDLIRKMLTFHPSLRITATQCLEHPWIQKY 283 (287)
T ss_dssp ----------HHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHH
T ss_pred ----------HHHHHHHHHcccChhhCcCHHHHhcCHHHhcc
Confidence 3556888899999999999999986 45544
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=99.95 E-value=3.3e-28 Score=240.26 Aligned_cols=202 Identities=15% Similarity=0.162 Sum_probs=148.3
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc--chhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA--TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~--~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
+.||+|+||.||+|+....+ +.||||.+..... ....+.|.+|+.++++++|||||++++++.+++..|+|||
T Consensus 37 ~~lg~G~~g~Vy~a~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 111 (286)
T 3uqc_A 37 IFHGGVPPLQFWQALDTALD-----RQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAE 111 (286)
T ss_dssp EEEEBSTTCEEEEEEETTTT-----EEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred EEEcccCCeEEEEEEecCCC-----ceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEE
Confidence 57999999999999998755 8999999986532 3345789999999999999999999999999999999999
Q ss_pred cccCCcHHHHH-----------------------hcc--cccccCCCCccccccCeEEecCCCcccccCCCcccCccccc
Q 007935 426 FIRNGSLYAAL-----------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARI 480 (584)
Q Consensus 426 y~~~GsL~~~L-----------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 480 (584)
|+++|+|.+++ |+. -|++++++|+.+..++.++.. +..|++|
T Consensus 112 ~~~g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~---------~~~~~~~---- 178 (286)
T 3uqc_A 112 WIRGGSLQEVADTSPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLA---------YPATMPD---- 178 (286)
T ss_dssp CCCEEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEEC---------SCCCCTT----
T ss_pred ecCCCCHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEE---------eccccCC----
Confidence 99999997665 333 367778888777666655543 3346654
Q ss_pred cCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcc
Q 007935 481 YGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNC 560 (584)
Q Consensus 481 ~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~C 560 (584)
++.++|||||||++|||+||+.||.+......... ................+.+ ...+.+++.+|
T Consensus 179 ----~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~---------~~~l~~li~~~ 243 (286)
T 3uqc_A 179 ----ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAP--AERDTAGQPIEPADIDRDI---------PFQISAVAARS 243 (286)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEE--CCBCTTSCBCCHHHHCTTS---------CHHHHHHHHHH
T ss_pred ----CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHH--HHHHhccCCCChhhcccCC---------CHHHHHHHHHH
Confidence 68899999999999999999999986433210000 0000000000000111111 12456688889
Q ss_pred cCCCCCCCCChHHHHHHHHhhhc
Q 007935 561 TELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 561 l~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
|+.||++| |+.|+++.|+++..
T Consensus 244 l~~dP~~R-s~~el~~~L~~~~~ 265 (286)
T 3uqc_A 244 VQGDGGIR-SASTLLNLMQQATA 265 (286)
T ss_dssp HCTTSSCC-CHHHHHHHHHHHHC
T ss_pred cccCCccC-CHHHHHHHHHHHhc
Confidence 99999999 99999999998753
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-28 Score=253.16 Aligned_cols=206 Identities=13% Similarity=0.119 Sum_probs=150.1
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC--CcchhhHhHHHHH---HHHHhcCCCceeeee-------EEE
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG--DATWRFKDFESEV---EAIARVQHPNIVRLK-------AFY 414 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~~f~~Ei---~~l~~l~HpnIV~l~-------g~~ 414 (584)
.+.||+|+||.||+|+...++ +.||||++... ......+.|.+|+ +++++++|||||+++ +++
T Consensus 78 ~~~lG~G~~g~V~~a~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~ 152 (377)
T 3byv_A 78 GTVLGQEDPYAYLEATDQETG-----ESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 152 (377)
T ss_dssp EEEEEEETTEEEEEEEC-CCC-----CEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEE
T ss_pred cceeecCCCEEEEEEEECCCC-----cEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhh
Confidence 468999999999999986654 89999999753 2233457899999 556666899999998 776
Q ss_pred EeCCc-----------------eeEeeecccCCcHHHHHhc--------------------------------c--cccc
Q 007935 415 YANDE-----------------KLLISDFIRNGSLYAALHG--------------------------------F--GLNR 443 (584)
Q Consensus 415 ~~~~~-----------------~~lV~Ey~~~GsL~~~L~~--------------------------------~--g~~~ 443 (584)
.+.+. .++||||+ +|+|.++++. . -|++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrD 231 (377)
T 3byv_A 153 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTY 231 (377)
T ss_dssp ECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred hccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence 65543 88999999 6899777642 1 4688
Q ss_pred cCCCCccccccCeEEecCCCccc--------ccCCCcccCccccccC----------CCCCCccchhhHHHHHHHHHhCC
Q 007935 444 LLPGTSKVTKNETIVTSGTGSRI--------SAISNVYLAPEARIYG----------SKFTQKCDVYSFGIVLLEILTGR 505 (584)
Q Consensus 444 ~~~~~~~i~~~~~~~~~~~~~~~--------~~gt~~y~aPE~~~~~----------~~~~~ksDV~SfGvvl~ElltG~ 505 (584)
++++|+.+..++.++..|||... ..| +.|+|||++... ..++.++|||||||++|||+||+
T Consensus 232 ikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~ 310 (377)
T 3byv_A 232 LRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCAD 310 (377)
T ss_dssp CCGGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSS
T ss_pred CCHHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCC
Confidence 88899988888888888887542 356 899999996542 17899999999999999999999
Q ss_pred CCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH--HHHhh
Q 007935 506 LPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE--SLDRV 581 (584)
Q Consensus 506 ~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~--~L~~i 581 (584)
.||........ . ..... ....+++ .+.+++.+||+.||++|||+.|+++ .++++
T Consensus 311 ~Pf~~~~~~~~-~----~~~~~----~~~~~~~-------------~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~ 366 (377)
T 3byv_A 311 LPITKDAALGG-S----EWIFR----SCKNIPQ-------------PVRALLEGFLRYPKEDRLLPLQAMETPEYEQL 366 (377)
T ss_dssp CCC------CC-S----GGGGS----SCCCCCH-------------HHHHHHHHHTCSSGGGCCCHHHHHTSHHHHHH
T ss_pred CCCcccccccc-h----hhhhh----hccCCCH-------------HHHHHHHHHcCCCchhCCCHHHHhhChHHHHH
Confidence 99975332110 0 00000 0112222 3456778899999999999999985 44444
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.2e-27 Score=248.17 Aligned_cols=156 Identities=19% Similarity=0.251 Sum_probs=129.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc------CCCceeeeeEEEEeCCce
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV------QHPNIVRLKAFYYANDEK 420 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l------~HpnIV~l~g~~~~~~~~ 420 (584)
.+.||+|+||.||+|.....+ +.||||+++... ...+.+.+|++++..+ +|+||+++++++...+..
T Consensus 102 ~~~LG~G~fg~V~~a~~~~~~-----~~vAvK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 102 LKVIGKGSFGQVVKAYDHKVH-----QHVALKMVRNEK--RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp EEEEEESSSEEEEEEEETTTT-----EEEEEEEECSCH--HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred EEEcccCccEEEEEEEECCCC-----cEEEEEEECCcc--chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 468999999999999988765 899999997642 2336788899998887 577999999999999999
Q ss_pred eEeeecccCCcHHHHHh---------------------------cc--cccccCCCCccccccCe--EEecCCCcc----
Q 007935 421 LLISDFIRNGSLYAALH---------------------------GF--GLNRLLPGTSKVTKNET--IVTSGTGSR---- 465 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~~L~---------------------------~~--g~~~~~~~~~~i~~~~~--~~~~~~~~~---- 465 (584)
++||||++ |+|.+++. .. .|+++++.|+.+..++. ++..|||..
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~ 253 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH 253 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETT
T ss_pred EEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccceecC
Confidence 99999996 58865553 32 36888888888877765 778888753
Q ss_pred ----cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCC
Q 007935 466 ----ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGP 511 (584)
Q Consensus 466 ----~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~ 511 (584)
...||+.|+|||++.. ..++.++|||||||++|||+||+.||.+.
T Consensus 254 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 254 QRVYTYIQSRFYRAPEVILG-ARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp CCCCSSCSCGGGCCHHHHHT-BCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CcccccCCCCCccChHHHhC-CCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 2468999999999554 68999999999999999999999999753
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=8.3e-28 Score=246.37 Aligned_cols=208 Identities=10% Similarity=0.118 Sum_probs=154.4
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcC---CCceeeeeEEEEeCCceeEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ---HPNIVRLKAFYYANDEKLLI 423 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~---HpnIV~l~g~~~~~~~~~lV 423 (584)
.+.||+|+||.||+|...........+.||||+++... ..++.+|++++.+++ |+||+++++++...+..++|
T Consensus 70 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv 145 (365)
T 3e7e_A 70 HHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN----PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLV 145 (365)
T ss_dssp EEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC----HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEE
T ss_pred EEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC----hhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEE
Confidence 46899999999999965433222333899999997642 267889999999987 99999999999999999999
Q ss_pred eecccCCcHHHHHhc------------------------------c--cccccCCCCccccc-----------cCeEEec
Q 007935 424 SDFIRNGSLYAALHG------------------------------F--GLNRLLPGTSKVTK-----------NETIVTS 460 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~~------------------------------~--g~~~~~~~~~~i~~-----------~~~~~~~ 460 (584)
||||++|+|.++++. . .|+|++++|+.+.. +..++..
T Consensus 146 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~ 225 (365)
T 3e7e_A 146 GELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALI 225 (365)
T ss_dssp ECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------CTTEEEC
T ss_pred EeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccccccCCEEEe
Confidence 999999999877742 2 36888888888876 6778888
Q ss_pred CCCccc-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhh
Q 007935 461 GTGSRI-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 527 (584)
Q Consensus 461 ~~~~~~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~ 527 (584)
|||... ..||..|||||++.. ..++.++|||||||++|||+||+.||........ .
T Consensus 226 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~----------~ 294 (365)
T 3e7e_A 226 DLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSN-KPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC----------K 294 (365)
T ss_dssp CCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTT-CCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE----------E
T ss_pred eCchhhhhhccCCCceeeeecCCCCCCChHHhcC-CCCCccccHHHHHHHHHHHHhCCCccccCCCCce----------e
Confidence 887541 358999999999554 6799999999999999999999999864322110 0
Q ss_pred cCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCC-CChHHHHHHHHhh
Q 007935 528 ERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFR-PRMRTVSESLDRV 581 (584)
Q Consensus 528 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~R-Pt~~ev~~~L~~i 581 (584)
....+.....+ ....++...|++.+|.+| |++.++.+.|+++
T Consensus 295 ~~~~~~~~~~~------------~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~ 337 (365)
T 3e7e_A 295 PEGLFRRLPHL------------DMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKV 337 (365)
T ss_dssp ECSCCTTCSSH------------HHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHH
T ss_pred echhccccCcH------------HHHHHHHHHHcCCCCCCcchHHHHHHHHHHHH
Confidence 01111111111 123346667999999998 6888888888765
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.5e-27 Score=237.97 Aligned_cols=218 Identities=17% Similarity=0.219 Sum_probs=149.1
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEE-----------
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYY----------- 415 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~----------- 415 (584)
.+.||+|+||.||+|.....+ +.||||++.... ....+++.+|++++++++|||||++++++.
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 16 LKPLGCGGNGLVFSAVDNDCD-----KRVAIKKIVLTD-PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp EEECC-----CEEEEEETTTT-----EEEEEEEEECCS-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred EEEeccCCCeEEEEEEECCCC-----eEEEEEEEecCC-hHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 467999999999999998765 899999997643 334578999999999999999999999874
Q ss_pred ---eCCceeEeeecccCCcHHHHH------------------------hcc--cccccCCCCcccc-ccCeEEecCCCcc
Q 007935 416 ---ANDEKLLISDFIRNGSLYAAL------------------------HGF--GLNRLLPGTSKVT-KNETIVTSGTGSR 465 (584)
Q Consensus 416 ---~~~~~~lV~Ey~~~GsL~~~L------------------------~~~--g~~~~~~~~~~i~-~~~~~~~~~~~~~ 465 (584)
+.+..++||||++ |+|.+++ |+. -|+++++.|+.+. .+..++..++|..
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~ 168 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLA 168 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCCTTC
T ss_pred cccccCceeEEeeccC-CCHHHHhhcCCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccCccc
Confidence 3467899999998 6886554 333 3577777887775 3456777777643
Q ss_pred c--------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC
Q 007935 466 I--------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP 531 (584)
Q Consensus 466 ~--------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~ 531 (584)
. ..+|..|+|||.+.....++.++|||||||++|||+||+.||.+.. ..............
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-----~~~~~~~~~~~~~~ 243 (320)
T 2i6l_A 169 RIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAH-----ELEQMQLILESIPV 243 (320)
T ss_dssp BCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHHSCC
T ss_pred cccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHHhcCC
Confidence 2 2468889999986655678999999999999999999999997532 11222222211110
Q ss_pred CccccChhh--------hhhh---------hHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 532 LSEVIDPAL--------VKEI---------HAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 532 ~~~~~d~~~--------~~~~---------~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
......+++ .... ........+.+++.+||+.||++|||+.|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 244 VHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp CCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred CchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 000000000 0000 00011245678999999999999999999985
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-27 Score=247.25 Aligned_cols=221 Identities=15% Similarity=0.144 Sum_probs=155.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcC--------CCceeeeeEEEE---
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ--------HPNIVRLKAFYY--- 415 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~--------HpnIV~l~g~~~--- 415 (584)
.+.||+|+||.||+|+...++ +.||||+++.. ....+.+.+|++++++++ |||||++++++.
T Consensus 42 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 42 IRKLGWGHFSTVWLSWDIQGK-----KFVAMKVVKSA--EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp EEEEEECSSEEEEEEEETTTT-----EEEEEEEECSC--HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred EEEeeecCCeeEEEEEecCCC-----eEEEEEEEecC--CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 467999999999999987765 89999999754 223478999999999995 788999999998
Q ss_pred -eCCceeEeeecccCCcHH---------------------------HHHhcc-c--ccccCCCCccccccC---------
Q 007935 416 -ANDEKLLISDFIRNGSLY---------------------------AALHGF-G--LNRLLPGTSKVTKNE--------- 455 (584)
Q Consensus 416 -~~~~~~lV~Ey~~~GsL~---------------------------~~L~~~-g--~~~~~~~~~~i~~~~--------- 455 (584)
+....++||||+ +|+|. .|||.. | |+++++.|+.+..++
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~ 193 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAE 193 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHH
T ss_pred CCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhh
Confidence 456799999999 45553 445554 4 677888887776443
Q ss_pred ----------------------------------------eEEecCCCcc--------cccCCCcccCccccccCCCCCC
Q 007935 456 ----------------------------------------TIVTSGTGSR--------ISAISNVYLAPEARIYGSKFTQ 487 (584)
Q Consensus 456 ----------------------------------------~~~~~~~~~~--------~~~gt~~y~aPE~~~~~~~~~~ 487 (584)
.++..++|.. ...||..|+|||++.. ..++.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ 272 (397)
T 1wak_A 194 ATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIG-SGYNT 272 (397)
T ss_dssp HC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHT-SCCCT
T ss_pred hHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcC-CCCCc
Confidence 5666777643 2468999999999654 67999
Q ss_pred ccchhhHHHHHHHHHhCCCCCCCCCCCCCc-HHHHHHHHhh--cCCC---------Ccccc-------------Chhhhh
Q 007935 488 KCDVYSFGIVLLEILTGRLPDAGPENDGKG-LESLVRKAFR--ERRP---------LSEVI-------------DPALVK 542 (584)
Q Consensus 488 ksDV~SfGvvl~ElltG~~p~~~~~~~~~~-l~~~~~~~~~--~~~~---------~~~~~-------------d~~~~~ 542 (584)
++|||||||++|||+||+.||......... -......... ...+ ....+ ...+..
T Consensus 273 ~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (397)
T 1wak_A 273 PADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFE 352 (397)
T ss_dssp HHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHH
T ss_pred HHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhH
Confidence 999999999999999999999865433211 1111111110 0000 00000 000000
Q ss_pred h-----hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 543 E-----IHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 543 ~-----~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
. .........+.+++.+||+.||++|||+.|+++
T Consensus 353 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 353 VLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp HHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred hhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 0 011334567889999999999999999999985
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.95 E-value=3e-27 Score=243.81 Aligned_cols=217 Identities=18% Similarity=0.279 Sum_probs=149.1
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCC--------
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAND-------- 418 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~-------- 418 (584)
.+.||+|+||.||+|+...++ +.||||++.... +.+.+|++++++++|||||++++++...+
T Consensus 12 ~~~lG~G~fg~V~~a~~~~~~-----~~vAiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 81 (383)
T 3eb0_A 12 GKTLGTGSFGIVCEVFDIESG-----KRFALKKVLQDP-----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQ 81 (383)
T ss_dssp EEEEECC-CEEEEEEEETTTC-----CEEEEEEEECCT-----TSCCHHHHHHTTCCCTTBCCEEEEEEEC---------
T ss_pred EEEEEeccCEEEEEEEECCCC-----CEEEEEEEecCc-----chHHHHHHHHHHcCCCCccchhheeeecCcccccccc
Confidence 468999999999999987765 899999997542 22347999999999999999999995532
Q ss_pred ------------------------------ceeEeeecccCCcHHHH-----------------------------Hhcc
Q 007935 419 ------------------------------EKLLISDFIRNGSLYAA-----------------------------LHGF 439 (584)
Q Consensus 419 ------------------------------~~~lV~Ey~~~GsL~~~-----------------------------L~~~ 439 (584)
..++||||+++ +|.+. ||+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 160 (383)
T 3eb0_A 82 PPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL 160 (383)
T ss_dssp ----------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 37899999984 76443 3444
Q ss_pred c--ccccCCCCcccc-ccCeEEecCCCccc----------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCC
Q 007935 440 G--LNRLLPGTSKVT-KNETIVTSGTGSRI----------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRL 506 (584)
Q Consensus 440 g--~~~~~~~~~~i~-~~~~~~~~~~~~~~----------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~ 506 (584)
| |+++++.|+.+. .+..++..|+|... ..||+.|+|||++.....++.++||||+||++|||++|+.
T Consensus 161 gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~ 240 (383)
T 3eb0_A 161 GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKP 240 (383)
T ss_dssp TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSC
T ss_pred cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCC
Confidence 3 677888888776 46777888877442 3678899999986654568999999999999999999999
Q ss_pred CCCCCCCCCCcHHHHHHHHhh--------c-----CCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHH
Q 007935 507 PDAGPENDGKGLESLVRKAFR--------E-----RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRT 573 (584)
Q Consensus 507 p~~~~~~~~~~l~~~~~~~~~--------~-----~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~e 573 (584)
||.+.... ..+..++...-. . ...++......... .........+.+++.+||+.||++|||+.|
T Consensus 241 pf~~~~~~-~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~R~t~~e 318 (383)
T 3eb0_A 241 LFSGETSI-DQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRK-ILPEGTPSLAIDLLEQILRYEPDLRINPYE 318 (383)
T ss_dssp SSCCSSHH-HHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHH-HSCTTCCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred CCCCCChH-HHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHh-hCCCCCCHHHHHHHHHHccCChhhCCCHHH
Confidence 99753211 111111111000 0 00001111111110 000112235678899999999999999999
Q ss_pred HHH
Q 007935 574 VSE 576 (584)
Q Consensus 574 v~~ 576 (584)
+++
T Consensus 319 ~l~ 321 (383)
T 3eb0_A 319 AMA 321 (383)
T ss_dssp HHT
T ss_pred Hhc
Confidence 984
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-27 Score=240.62 Aligned_cols=211 Identities=18% Similarity=0.250 Sum_probs=138.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHH-HHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVE-AIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~-~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|.....+ +.||||+++........+++.+|+. +++.++|||||++++++.+++..++|||
T Consensus 27 ~~~lg~G~~g~Vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e 101 (327)
T 3aln_A 27 LGEIGRGAYGSVNKMVHKPSG-----QIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICME 101 (327)
T ss_dssp -CEEEECSSEEEEEEEETTTT-----EEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hheeccCCCEEEEEEEEcCCC-----CEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEe
Confidence 457999999999999987665 8999999987644444466777777 6777899999999999999999999999
Q ss_pred cccCCcHHH------------------------------HHhcc---cccccCCCCccccccCeEEecCCCccc------
Q 007935 426 FIRNGSLYA------------------------------ALHGF---GLNRLLPGTSKVTKNETIVTSGTGSRI------ 466 (584)
Q Consensus 426 y~~~GsL~~------------------------------~L~~~---g~~~~~~~~~~i~~~~~~~~~~~~~~~------ 466 (584)
|+++ +|.+ +||.. -|+++.+.|+.+..++.++..++|...
T Consensus 102 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 180 (327)
T 3aln_A 102 LMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSI 180 (327)
T ss_dssp CCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-----
T ss_pred ecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCceeccccc
Confidence 9986 6543 33433 367778888888777888888887432
Q ss_pred ----ccCCCcccCccccc---cCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC-CCccccCh
Q 007935 467 ----SAISNVYLAPEARI---YGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR-PLSEVIDP 538 (584)
Q Consensus 467 ----~~gt~~y~aPE~~~---~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~d~ 538 (584)
..||..|+|||++. .+..++.++|||||||++|||+||+.||...... ............ .+.....+
T Consensus 181 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 256 (327)
T 3aln_A 181 AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSV----FDQLTQVVKGDPPQLSNSEER 256 (327)
T ss_dssp -------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-----------CCCCCSCCCCCCCCSSC
T ss_pred ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchH----HHHHHHHhcCCCCCCCCcccc
Confidence 26889999999863 3456899999999999999999999999753211 111111111111 01110000
Q ss_pred hhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 539 ALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 539 ~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.. ...+.+++.+||+.||++|||+.|+++
T Consensus 257 ~~---------~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 257 EF---------SPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CC---------CHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred cC---------CHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 11 124556888899999999999999975
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=4.8e-28 Score=248.69 Aligned_cols=212 Identities=12% Similarity=0.059 Sum_probs=142.7
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhc--CCCceeeee-------EEE
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARV--QHPNIVRLK-------AFY 414 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l--~HpnIV~l~-------g~~ 414 (584)
..+.||+|+||.||+|+...++ +.||||++.... .....+.+.+|+.++..+ +|||||+++ +++
T Consensus 66 ~~~~lG~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 66 LVEPLRVGDRSVVFLVRDVERL-----EDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEECSSEEEEEEEETTTT-----EEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred eeeeccCCCCEEEEEEEECCCC-----ceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 3578999999999999987665 899999998753 223446788886554444 699988755 555
Q ss_pred EeCC-----------------ceeEeeecccCCcHHHHHhc--------------------------------c--cccc
Q 007935 415 YAND-----------------EKLLISDFIRNGSLYAALHG--------------------------------F--GLNR 443 (584)
Q Consensus 415 ~~~~-----------------~~~lV~Ey~~~GsL~~~L~~--------------------------------~--g~~~ 443 (584)
...+ ..++|||||+ |+|.++++. . -|+|
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrD 219 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGH 219 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETT
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCc
Confidence 5433 3799999999 899766642 2 3688
Q ss_pred cCCCCccccccCeEEecCCCcc--------cccCCCcccCccccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCC
Q 007935 444 LLPGTSKVTKNETIVTSGTGSR--------ISAISNVYLAPEARIYG-SKFTQKCDVYSFGIVLLEILTGRLPDAGPEND 514 (584)
Q Consensus 444 ~~~~~~~i~~~~~~~~~~~~~~--------~~~gt~~y~aPE~~~~~-~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~ 514 (584)
++++|+.+..++.++..|||.. ...+|+.|+|||++..+ ..++.++|||||||++|||+||+.||......
T Consensus 220 ikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~ 299 (371)
T 3q60_A 220 FTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPG 299 (371)
T ss_dssp CSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTT
T ss_pred CCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcc
Confidence 8889988888888888888753 34677899999995431 47899999999999999999999999865332
Q ss_pred CCcHHHHHHHHh--hcCCCC--ccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 515 GKGLESLVRKAF--RERRPL--SEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 515 ~~~l~~~~~~~~--~~~~~~--~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
............ ...... ...++ ..+.+++.+||+.||++|||+.|+++
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 300 IKGSWKRPSLRVPGTDSLAFGSCTPLP-------------DFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp CTTCCCBCCTTSCCCCSCCCTTSSCCC-------------HHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred cccchhhhhhhhccccccchhhccCCC-------------HHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 110000000000 000000 01112 24556888899999999999999974
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=99.94 E-value=6.7e-27 Score=246.77 Aligned_cols=216 Identities=16% Similarity=0.159 Sum_probs=158.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCC-CceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQH-PNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~H-pnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|+....+ +.||||++...... +++.+|++++..++| ++|+.+..++.+.+..++|||
T Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~-----~~vAvK~~~~~~~~---~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 12 GRKIGSGSFGEIYLGTNIQTN-----EEVAIKLENVKTKH---PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp CCCCEECSSCEEEEEEETTTC-----CEEEEEEEETTCSS---CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred EEEEeeCCCEEEEEEEECCCC-----cEEEEEEecccccc---HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 457999999999999987655 89999988764332 568999999999976 566666677777888999999
Q ss_pred cccCCcHHHHHh--------------------------cc--cccccCCCCccc---cccCeEEecCCCcc---------
Q 007935 426 FIRNGSLYAALH--------------------------GF--GLNRLLPGTSKV---TKNETIVTSGTGSR--------- 465 (584)
Q Consensus 426 y~~~GsL~~~L~--------------------------~~--g~~~~~~~~~~i---~~~~~~~~~~~~~~--------- 465 (584)
|+ +|+|.++++ .. .|+++++.|+.+ ..+..++..|||..
T Consensus 84 ~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (483)
T 3sv0_A 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTH 162 (483)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred CC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccc
Confidence 99 999976664 22 468888888887 45577777777643
Q ss_pred ---------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCcccc
Q 007935 466 ---------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVI 536 (584)
Q Consensus 466 ---------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 536 (584)
...||..|+|||++. +..++.++|||||||++|||++|+.||.+.... .............. ....
T Consensus 163 ~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~--~~~~~~~~i~~~~~--~~~~ 237 (483)
T 3sv0_A 163 QHIPYRENKNLTGTARYASVNTHL-GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAG--TKKQKYEKISEKKV--ATSI 237 (483)
T ss_dssp CBCCCCCCCCCCSCTTTCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCS--SHHHHHHHHHHHHH--HSCH
T ss_pred cccccccccccCCCccccCHHHhc-CCCCChHHHHHHHHHHHHHHHhCCCCCccccch--hHHHHHHHHhhccc--cccH
Confidence 346899999999955 468999999999999999999999999864332 12222211111100 0000
Q ss_pred ChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 537 DPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 537 d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
+.+.. ....++.+++..||+.||++||++.+|++.|+++.
T Consensus 238 -~~l~~-----~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~ 277 (483)
T 3sv0_A 238 -EALCR-----GYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLF 277 (483)
T ss_dssp -HHHHT-----TSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred -HHHhc-----CCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 00000 11235677888899999999999999999998873
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=3.5e-27 Score=241.50 Aligned_cols=216 Identities=19% Similarity=0.265 Sum_probs=151.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcc----------hhhHhHHHHHHHHHhcCCCceeeeeEEEEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT----------WRFKDFESEVEAIARVQHPNIVRLKAFYYA 416 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~----------~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~ 416 (584)
.+.||+|+||.||+|....+ ..||||++...... ...+.+.+|++++++++|||||++++++..
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 100 (362)
T 3pg1_A 27 QRFISSGSYGAVCAGVDSEG------IPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVH 100 (362)
T ss_dssp EEEEEEETTEEEEEEECTTS------CEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEE
T ss_pred eEEeccCCCEEEEEEECCCC------CeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEe
Confidence 46899999999999998775 79999999654221 113679999999999999999999999965
Q ss_pred CC-----ceeEeeecccCCcHHHHH--------------------------hcc--cccccCCCCccccccCeEEecCCC
Q 007935 417 ND-----EKLLISDFIRNGSLYAAL--------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTG 463 (584)
Q Consensus 417 ~~-----~~~lV~Ey~~~GsL~~~L--------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~ 463 (584)
.+ ..++||||++ |+|.+++ |.. -|+++++.|+.+..+..++..++|
T Consensus 101 ~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 179 (362)
T 3pg1_A 101 FEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFN 179 (362)
T ss_dssp CCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCTT
T ss_pred ccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCCEEEEecC
Confidence 33 4799999998 5775544 433 367788888888777888888887
Q ss_pred ccc----------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhc--CCC
Q 007935 464 SRI----------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE--RRP 531 (584)
Q Consensus 464 ~~~----------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~--~~~ 531 (584)
... ..||+.|+|||++.....++.++|||||||++|||+||+.||.+.. ........... ...
T Consensus 180 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~-----~~~~~~~i~~~~~~~~ 254 (362)
T 3pg1_A 180 LAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGST-----FYNQLNKIVEVVGTPK 254 (362)
T ss_dssp C---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHHHCCCC
T ss_pred cccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHHHcCCCC
Confidence 542 3678899999986654678999999999999999999999997532 11111111110 000
Q ss_pred -------------------CccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 532 -------------------LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 532 -------------------~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
........... . .......+.+++.+||+.||++|||+.|+++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 255 IEDVVMFSSPSARDYLRNSLSNVPARAWTA-V-VPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp HHHHHHTSCHHHHHHTTTCCCCCCCCCHHH-H-STTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hHHhhhccchhhhHHHHhhcccCChhhHHh-h-CCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 00000000000 0 0011234678899999999999999999985
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.3e-27 Score=246.37 Aligned_cols=206 Identities=20% Similarity=0.223 Sum_probs=146.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.++||+|+||+||.+....+ +.||||++.... .+.+.+|++++.++ +|||||++++++.+++..++|||
T Consensus 20 ~~~LG~G~~g~V~~~~~~~g------~~vAvK~~~~~~----~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E 89 (434)
T 2rio_A 20 EKILGYGSSGTVVFQGSFQG------RPVAVKRMLIDF----CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALE 89 (434)
T ss_dssp EEEEEECSTTCEEEEEESSS------SEEEEEEEEGGG----HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred cCeEeeCCCeEEEEEEEECC------eEEEEEEEcHHH----HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEe
Confidence 46899999999987655554 799999987532 25688999999987 89999999999999999999999
Q ss_pred cccCCcHHHHHh--------------------------------cc--cccccCCCCcccccc-------------CeEE
Q 007935 426 FIRNGSLYAALH--------------------------------GF--GLNRLLPGTSKVTKN-------------ETIV 458 (584)
Q Consensus 426 y~~~GsL~~~L~--------------------------------~~--g~~~~~~~~~~i~~~-------------~~~~ 458 (584)
|++ |+|.+++. +. .|+++++.|+.+..+ ..++
T Consensus 90 ~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~k 168 (434)
T 2rio_A 90 LCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRIL 168 (434)
T ss_dssp CCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEE
T ss_pred cCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEE
Confidence 995 68866653 22 357777777776543 2566
Q ss_pred ecCCCcc---------------cccCCCcccCcccccc------CCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCC
Q 007935 459 TSGTGSR---------------ISAISNVYLAPEARIY------GSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGK 516 (584)
Q Consensus 459 ~~~~~~~---------------~~~gt~~y~aPE~~~~------~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~ 516 (584)
..|+|.. ...||+.|+|||++.. ...++.++|||||||++|||+| |+.||......
T Consensus 169 L~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~-- 246 (434)
T 2rio_A 169 ISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR-- 246 (434)
T ss_dssp ECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH--
T ss_pred EcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh--
Confidence 7777632 1368999999998643 2568999999999999999999 99999743211
Q ss_pred cHHHHHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 517 GLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 517 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
...+ .......... +.+ .......++.+++.+||+.||++|||+.||++
T Consensus 247 -~~~i----~~~~~~~~~~--~~~----~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 247 -ESNI----IRGIFSLDEM--KCL----HDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp -HHHH----HHTCCCCCCC--TTC----CCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -HHHH----hcCCCCcccc--ccc----ccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 1111 1111111111 000 01122346678999999999999999999975
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.4e-27 Score=236.11 Aligned_cols=207 Identities=19% Similarity=0.256 Sum_probs=142.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHh-HHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKD-FESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~-f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|.....+ +.||||++..........+ +.++..+++.++||||+++++++.+++..++|||
T Consensus 30 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e 104 (318)
T 2dyl_A 30 LGEMGSGTCGQVWKMRFRKTG-----HVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAME 104 (318)
T ss_dssp EEEC------CEEEEEETTTC-----CEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred cceeeecCCeeEEEEEEecCC-----eEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEe
Confidence 467999999999999997655 7999999987543333233 4445557888899999999999999999999999
Q ss_pred cccCCcH--------------------------HHHHhc---ccccccCCCCccccccCeEEecCCCccc----------
Q 007935 426 FIRNGSL--------------------------YAALHG---FGLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 426 y~~~GsL--------------------------~~~L~~---~g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
|+ ++.+ ..|||. ..|.++.+.|+.+..+..++..+++...
T Consensus 105 ~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 183 (318)
T 2dyl_A 105 LM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDR 183 (318)
T ss_dssp CC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC-----------
T ss_pred cc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCccccc
Confidence 99 3343 244554 3467788888888777788888876432
Q ss_pred ccCCCcccCccccc----cCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCC-c--cccChh
Q 007935 467 SAISNVYLAPEARI----YGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPL-S--EVIDPA 539 (584)
Q Consensus 467 ~~gt~~y~aPE~~~----~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~-~--~~~d~~ 539 (584)
..||..|+|||++. .+..++.++|||||||++|||+||+.||..... .............+. + ..+++
T Consensus 184 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~- 258 (318)
T 2dyl_A 184 SAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT----DFEVLTKVLQEEPPLLPGHMGFSG- 258 (318)
T ss_dssp ---CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCS----HHHHHHHHHHSCCCCCCSSSCCCH-
T ss_pred cCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCc----cHHHHHHHhccCCCCCCccCCCCH-
Confidence 36889999999864 235688999999999999999999999975222 223333333332221 1 11233
Q ss_pred hhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 540 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||+.||.+|||+.|+++
T Consensus 259 ------------~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 259 ------------DFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp ------------HHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ------------HHHHHHHHHccCChhHCcCHHHHhh
Confidence 3445777799999999999999975
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.8e-27 Score=236.03 Aligned_cols=201 Identities=16% Similarity=0.226 Sum_probs=148.1
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcc-----hhhHhHHHHHHHHHhc----CCCceeeeeEEEEeC
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-----WRFKDFESEVEAIARV----QHPNIVRLKAFYYAN 417 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~-----~~~~~f~~Ei~~l~~l----~HpnIV~l~g~~~~~ 417 (584)
.+.||+|+||.||+|+...++ +.||||++...... .....+.+|+.++.++ +||||+++++++.+.
T Consensus 36 ~~~lg~G~~g~Vy~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~ 110 (312)
T 2iwi_A 36 GPLLGKGGFGTVFAGHRLTDR-----LQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQ 110 (312)
T ss_dssp EEEEEEETTEEEEEEECTTTC-----CEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC---
T ss_pred eeEEEcCCCEEEEEEEEccCC-----eEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecC
Confidence 467999999999999987665 89999999764221 1235577899999999 899999999999999
Q ss_pred CceeEeeec-ccCCcHHHHHhc-------------------------c--cccccCCCCcccc-ccCeEEecCCCcc---
Q 007935 418 DEKLLISDF-IRNGSLYAALHG-------------------------F--GLNRLLPGTSKVT-KNETIVTSGTGSR--- 465 (584)
Q Consensus 418 ~~~~lV~Ey-~~~GsL~~~L~~-------------------------~--g~~~~~~~~~~i~-~~~~~~~~~~~~~--- 465 (584)
+..++|||| +++|+|.+++.. . -|+++.+.|+.+. .++.++..+++..
T Consensus 111 ~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~ 190 (312)
T 2iwi_A 111 EGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALL 190 (312)
T ss_dssp --CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCCSSCEEC
T ss_pred CeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEcchhhhc
Confidence 999999999 889999776642 2 3577778888776 5677777777643
Q ss_pred ------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChh
Q 007935 466 ------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPA 539 (584)
Q Consensus 466 ------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~ 539 (584)
...||..|+|||++......+.++|||||||++|||++|+.||... .. .......+...+++.
T Consensus 191 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~-------~~----~~~~~~~~~~~~~~~ 259 (312)
T 2iwi_A 191 HDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD-------QE----ILEAELHFPAHVSPD 259 (312)
T ss_dssp CSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH-------HH----HHHTCCCCCTTSCHH
T ss_pred ccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCCh-------HH----HhhhccCCcccCCHH
Confidence 2368899999998665434456999999999999999999999631 11 112222233333333
Q ss_pred hhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 540 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+.+++.+||+.||++|||+.|+++
T Consensus 260 -------------~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 260 -------------CCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp -------------HHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred -------------HHHHHHHHccCChhhCcCHHHHhc
Confidence 345777799999999999999986
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=99.94 E-value=3.2e-27 Score=237.35 Aligned_cols=201 Identities=18% Similarity=0.256 Sum_probs=154.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcc-----hhhHhHHHHHHHHHhcC--CCceeeeeEEEEeCCc
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-----WRFKDFESEVEAIARVQ--HPNIVRLKAFYYANDE 419 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~-----~~~~~f~~Ei~~l~~l~--HpnIV~l~g~~~~~~~ 419 (584)
.+.||+|+||.||+|+...++ +.||||+++..... ...+.+.+|+.++++++ ||||+++++++.+.+.
T Consensus 48 ~~~lg~G~~g~Vy~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~ 122 (320)
T 3a99_A 48 GPLLGSGGFGSVYSGIRVSDN-----LPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS 122 (320)
T ss_dssp EEECSSSSSCEEEEEEETTTT-----EEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred EEEEeeCCCeEEEEEEECCCC-----cEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCc
Confidence 467999999999999987665 89999999765221 12356889999999996 5999999999999999
Q ss_pred eeEeeecccC-CcHHHHHh-------------------------cc--cccccCCCCcccc-ccCeEEecCCCccc----
Q 007935 420 KLLISDFIRN-GSLYAALH-------------------------GF--GLNRLLPGTSKVT-KNETIVTSGTGSRI---- 466 (584)
Q Consensus 420 ~~lV~Ey~~~-GsL~~~L~-------------------------~~--g~~~~~~~~~~i~-~~~~~~~~~~~~~~---- 466 (584)
.++||||+.+ ++|.+++. +. .|+++.+.|+.+. .+..++..|++...
T Consensus 123 ~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~ 202 (320)
T 3a99_A 123 FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD 202 (320)
T ss_dssp EEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCS
T ss_pred EEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCcccccccc
Confidence 9999999986 88876654 33 3677888888877 55777888877432
Q ss_pred -----ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhh
Q 007935 467 -----SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALV 541 (584)
Q Consensus 467 -----~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~ 541 (584)
..||..|+|||++.....++.++|||||||++|||+||+.||... .. ...........+++.
T Consensus 203 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~-------~~----~~~~~~~~~~~~~~~-- 269 (320)
T 3a99_A 203 TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-------EE----IIRGQVFFRQRVSSE-- 269 (320)
T ss_dssp SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH-------HH----HHHCCCCCSSCCCHH--
T ss_pred ccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCCh-------hh----hhcccccccccCCHH--
Confidence 368999999998665444578999999999999999999999641 11 112222223333333
Q ss_pred hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 542 KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 542 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+.+++.+||+.||++|||+.|+++
T Consensus 270 -----------~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 270 -----------CQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp -----------HHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -----------HHHHHHHHccCChhhCcCHHHHhc
Confidence 445777799999999999999986
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=8.4e-27 Score=236.09 Aligned_cols=225 Identities=18% Similarity=0.251 Sum_probs=156.4
Q ss_pred ceeceeecCceEEEEEec-CCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCc------eeeeeEEEEeCCc
Q 007935 347 AYVVGKSKNGIMYKVVVG-RGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPN------IVRLKAFYYANDE 419 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~-~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~Hpn------IV~l~g~~~~~~~ 419 (584)
.+.||+|+||.||+|... .++ +.||||+++... ...+.+.+|++++++++|+| |+++++++.+.+.
T Consensus 19 ~~~lg~G~~g~V~~~~~~~~~~-----~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 19 VDTLGEGAFGKVVECIDHKAGG-----RHVAVKIVKNVD--RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp EEEEEEETTEEEEEEEETTTTT-----EEEEEEEECSSH--HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred EEEEecCCCeEEEEEEecCCCC-----cEEEEEEEecCC--chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 467999999999999873 333 899999997642 23477899999999997665 9999999999999
Q ss_pred eeEeeecccCCcHHHHHh---------------------------cc--cccccCCCCccccc-----------------
Q 007935 420 KLLISDFIRNGSLYAALH---------------------------GF--GLNRLLPGTSKVTK----------------- 453 (584)
Q Consensus 420 ~~lV~Ey~~~GsL~~~L~---------------------------~~--g~~~~~~~~~~i~~----------------- 453 (584)
.++||||+ +|+|.+++. +. -|+++++.|+.+..
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~ 170 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERT 170 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEE
T ss_pred EEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCcccccccc
Confidence 99999999 889876654 22 35677777776654
Q ss_pred --cCeEEecCCCcc--------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHH
Q 007935 454 --NETIVTSGTGSR--------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVR 523 (584)
Q Consensus 454 --~~~~~~~~~~~~--------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~ 523 (584)
+..++..++|.. ...||+.|+|||++. +..++.++|||||||++|||+||+.||..... ......+.
T Consensus 171 ~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~g~~pf~~~~~--~~~~~~~~ 247 (339)
T 1z57_A 171 LINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFPTHDS--KEHLAMME 247 (339)
T ss_dssp ESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHT-TSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCH--HHHHHHHH
T ss_pred ccCCCceEeeCcccccCccccccccCCccccChHHhh-CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHH
Confidence 334666777643 246899999999955 46899999999999999999999999975321 11111121
Q ss_pred HHhhcCCC-C------ccc-------cCh--hhh------------hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHH
Q 007935 524 KAFRERRP-L------SEV-------IDP--ALV------------KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVS 575 (584)
Q Consensus 524 ~~~~~~~~-~------~~~-------~d~--~~~------------~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~ 575 (584)
......+. + ... .+. ... ...........+.+++.+||+.||++|||+.|++
T Consensus 248 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell 327 (339)
T 1z57_A 248 RILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREAL 327 (339)
T ss_dssp HHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHT
T ss_pred HHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHh
Confidence 11110000 0 000 000 000 0000112345678999999999999999999998
Q ss_pred HH--HHhhh
Q 007935 576 ES--LDRVK 582 (584)
Q Consensus 576 ~~--L~~i~ 582 (584)
+. +++++
T Consensus 328 ~hp~f~~~~ 336 (339)
T 1z57_A 328 KHPFFDLLK 336 (339)
T ss_dssp TSGGGGGGG
T ss_pred cCHHHHHHh
Confidence 53 55544
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=5.3e-27 Score=235.07 Aligned_cols=205 Identities=17% Similarity=0.237 Sum_probs=150.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcC--CCceeeeeEEEEeCCceeEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQ--HPNIVRLKAFYYANDEKLLI 423 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~--HpnIV~l~g~~~~~~~~~lV 423 (584)
.+.||+|+||.||++...++ +.||||++.... .....+.|.+|++++.+++ ||||+++++++.+++..++|
T Consensus 33 ~~~lg~G~~g~Vy~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 106 (313)
T 3cek_A 33 LKQIGSGGSSKVFQVLNEKK------QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 106 (313)
T ss_dssp EEEEECCSSEEEEEEECTTC------CEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEE
T ss_pred EEEecCCCCEEEEEEEcCCC------cEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEE
Confidence 46899999999999998764 789999997642 3334578999999999997 59999999999999999999
Q ss_pred eecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCccc----------
Q 007935 424 SDFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
|| +.+|+|.+++. +. .|+++.+.|+.+. ++.++..++|...
T Consensus 107 ~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~~~~~~ 184 (313)
T 3cek_A 107 ME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVV 184 (313)
T ss_dssp EC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCC---------
T ss_pred Ee-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE-CCeEEEeeccccccccCcccccc
Confidence 99 56789876654 22 3567777777663 4666777776432
Q ss_pred ---ccCCCcccCcccccc----------CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcC--CC
Q 007935 467 ---SAISNVYLAPEARIY----------GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER--RP 531 (584)
Q Consensus 467 ---~~gt~~y~aPE~~~~----------~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~--~~ 531 (584)
..||..|+|||++.. ...++.++|||||||++|||+||+.||..... ............ ..
T Consensus 185 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~----~~~~~~~~~~~~~~~~ 260 (313)
T 3cek_A 185 KDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN----QISKLHAIIDPNHEIE 260 (313)
T ss_dssp -----CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS----HHHHHHHHHCTTSCCC
T ss_pred ccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH----HHHHHHHHHhcccccC
Confidence 257999999998543 13688899999999999999999999975322 112222222211 11
Q ss_pred CccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 532 ~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+...++ .+.+++.+||+.||++|||+.|+++
T Consensus 261 ~~~~~~~-------------~l~~li~~~l~~dp~~Rps~~ell~ 292 (313)
T 3cek_A 261 FPDIPEK-------------DLQDVLKCCLKRDPKQRISIPELLA 292 (313)
T ss_dssp CCCCSCH-------------HHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CcccchH-------------HHHHHHHHHccCCcccCcCHHHHhc
Confidence 2222222 3455777899999999999999985
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.7e-27 Score=237.77 Aligned_cols=205 Identities=18% Similarity=0.268 Sum_probs=129.7
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHH-HHHhcCCCceeeeeEEEEe----CCce
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVE-AIARVQHPNIVRLKAFYYA----NDEK 420 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~-~l~~l~HpnIV~l~g~~~~----~~~~ 420 (584)
..++||+|+||.||+|+...++ +.||||++... ....+|+. .+..++||||+++++++.. .+..
T Consensus 33 ~~~~lG~G~~g~V~~~~~~~~~-----~~vavK~~~~~------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 101 (336)
T 3fhr_A 33 SKQVLGLGVNGKVLECFHRRTG-----QKCALKLLYDS------PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL 101 (336)
T ss_dssp EEEEEEEETTEEEEEEEETTTC-----CEEEEEEEESS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cceeeeeCCCeEEEEEEECCCC-----CEEEEEEecCc------HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence 3467999999999999998765 89999999753 22333443 4566799999999999987 4458
Q ss_pred eEeeecccCCcHHHHHhc---------------------------c--cccccCCCCcccccc---CeEEecCCCcc---
Q 007935 421 LLISDFIRNGSLYAALHG---------------------------F--GLNRLLPGTSKVTKN---ETIVTSGTGSR--- 465 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~~L~~---------------------------~--g~~~~~~~~~~i~~~---~~~~~~~~~~~--- 465 (584)
++||||+++|+|.+++.. . -|+++++.|+.+..+ ..++..++|..
T Consensus 102 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~ 181 (336)
T 3fhr_A 102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKET 181 (336)
T ss_dssp EEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred EEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccceec
Confidence 999999999999777643 2 357777777776543 33677777643
Q ss_pred ------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCc----cc
Q 007935 466 ------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLS----EV 535 (584)
Q Consensus 466 ------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~----~~ 535 (584)
...||+.|+|||++. +..++.++|||||||++|||++|+.||......... ..............+ ..
T Consensus 182 ~~~~~~~~~~t~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 259 (336)
T 3fhr_A 182 TQNALQTPCYTPYYVAPEVLG-PEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAIS-PGMKRRIRLGQYGFPNPEWSE 259 (336)
T ss_dssp -----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC----------------------CCCTTTSTT
T ss_pred cccccccCCCCcCccChhhhC-CCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhh-hhHHHhhhccccccCchhhcc
Confidence 236789999999954 467899999999999999999999999754322110 001111111111111 12
Q ss_pred cChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 536 IDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 536 ~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+++ .+.+++.+||+.||++|||+.|+++
T Consensus 260 ~~~-------------~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 260 VSE-------------DAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp CCH-------------HHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CCH-------------HHHHHHHHHCCCChhHCcCHHHHhc
Confidence 222 3456788899999999999999986
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=9.7e-27 Score=239.87 Aligned_cols=155 Identities=22% Similarity=0.277 Sum_probs=125.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcC-CC-----ceeeeeEEEEeCCce
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-HP-----NIVRLKAFYYANDEK 420 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~-Hp-----nIV~l~g~~~~~~~~ 420 (584)
.+.||+|+||.||+|+...++ +.||||+++... ...+++.+|+.++..++ |+ +||++++++...+..
T Consensus 59 ~~~lG~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 131 (382)
T 2vx3_A 59 DSLIGKGSFGQVVKAYDRVEQ-----EWVAIKIIKNKK--AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHL 131 (382)
T ss_dssp EEEEEEETTEEEEEEEETTTT-----EEEEEEEECSSH--HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEE
T ss_pred EEEEeecCCEEEEEEEEcCCC-----cEEEEEEEeccH--HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCce
Confidence 468999999999999987765 899999998542 23467888999999885 55 499999999999999
Q ss_pred eEeeecccCCcHHHHHhc-------------------------------ccccccCCCCccccc--cCeEEecCCCcc--
Q 007935 421 LLISDFIRNGSLYAALHG-------------------------------FGLNRLLPGTSKVTK--NETIVTSGTGSR-- 465 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~~L~~-------------------------------~g~~~~~~~~~~i~~--~~~~~~~~~~~~-- 465 (584)
++||||++ |+|.+++.. ..|+++++.|+.+.. +..++..|||..
T Consensus 132 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~ 210 (382)
T 2vx3_A 132 CLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQ 210 (382)
T ss_dssp EEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred EEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCcee
Confidence 99999996 588665532 236777788877743 456777887754
Q ss_pred ------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCC
Q 007935 466 ------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAG 510 (584)
Q Consensus 466 ------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~ 510 (584)
...||+.|+|||++.. ..++.++|||||||++|||+||+.||.+
T Consensus 211 ~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~pf~~ 260 (382)
T 2vx3_A 211 LGQRIYQYIQSRFYRSPEVLLG-MPYDLAIDMWSLGCILVEMHTGEPLFSG 260 (382)
T ss_dssp TTCCCCSSCSCGGGCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cccccccccCCccccChHHHcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 2468999999999554 6899999999999999999999999985
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=99.94 E-value=3e-26 Score=230.91 Aligned_cols=219 Identities=18% Similarity=0.222 Sum_probs=151.6
Q ss_pred ceeceeecCceEEEEEec-CCCCCCCceEEEEEEecCCCc-chhhHhHHHHHHHHHhc---CCCceeeeeEEEE-----e
Q 007935 347 AYVVGKSKNGIMYKVVVG-RGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARV---QHPNIVRLKAFYY-----A 416 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~-~~~~~~~~~~vAvK~l~~~~~-~~~~~~f~~Ei~~l~~l---~HpnIV~l~g~~~-----~ 416 (584)
.+.||+|+||.||+|+.. .++ +.||||+++.... ......+.+|+.+++++ +||||+++++++. .
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~ 90 (326)
T 1blx_A 16 VAEIGEGAYGKVFKARDLKNGG-----RFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 90 (326)
T ss_dssp EEEEEEETTEEEEEEEETTTTT-----EEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSS
T ss_pred eeeecccccEEEEEEEecCCCC-----EEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCC
Confidence 467999999999999984 333 8999999975422 22235678898888777 8999999999997 4
Q ss_pred CCceeEeeecccCCcHHHHHh---------------------------cc--cccccCCCCccccccCeEEecCCCccc-
Q 007935 417 NDEKLLISDFIRNGSLYAALH---------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI- 466 (584)
Q Consensus 417 ~~~~~lV~Ey~~~GsL~~~L~---------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~- 466 (584)
....++||||++ |+|.+++. .. .|+++.+.|+.+..++.++..++|...
T Consensus 91 ~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~ 169 (326)
T 1blx_A 91 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARI 169 (326)
T ss_dssp EEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCC
T ss_pred CceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCccccc
Confidence 567899999998 68876653 32 357777888888777788888876432
Q ss_pred ---------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC--CCccc
Q 007935 467 ---------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR--PLSEV 535 (584)
Q Consensus 467 ---------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~--~~~~~ 535 (584)
..||..|+|||++.. ..++.++|||||||++|||+||+.||.+.... ..+..... ...... .....
T Consensus 170 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~i~~-~~~~~~~~~~~~~ 246 (326)
T 1blx_A 170 YSFQMALTSVVVTLWYRAPEVLLQ-SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV-DQLGKILD-VIGLPGEEDWPRD 246 (326)
T ss_dssp CCGGGGGCCCCCCCTTCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHH-HHCCCCGGGSCTT
T ss_pred ccCCCCccccccccceeCHHHHhc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH-HHHHHHHH-HcCCCCcccCccc
Confidence 367899999999554 67999999999999999999999999753211 11111111 111000 00000
Q ss_pred c-----------ChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 536 I-----------DPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 536 ~-----------d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
. ...+.... ......+.+++.+||+.||++|||+.|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 247 VALPRQAFHSKSAQPIEKFV--TDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp CSSCGGGSCCCCCCCGGGTC--CSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cccchhhhcccCcchhhhcc--ccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0 00000000 011234567888999999999999999984
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-26 Score=238.70 Aligned_cols=221 Identities=16% Similarity=0.177 Sum_probs=151.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcC-----------CCceeeeeEEEE
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-----------HPNIVRLKAFYY 415 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~-----------HpnIV~l~g~~~ 415 (584)
.+.||+|+||.||+|+....+ +.||||++.... ...+.+.+|++++++++ ||||+++++++.
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 24 VRKLGWGHFSTVWLAKDMVNN-----THVAMKIVRGDK--VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp EEEEEECSSEEEEEEEETTTT-----EEEEEEEECSCH--HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred EEeeeecCCeEEEEEEecCCC-----cEEEEEEecCCc--cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 467999999999999987665 899999997532 23377899999999986 899999999998
Q ss_pred eCC----ceeEeeecccCCcHHHHH---------------------------hcc-c--ccccCCCCcccccc------C
Q 007935 416 AND----EKLLISDFIRNGSLYAAL---------------------------HGF-G--LNRLLPGTSKVTKN------E 455 (584)
Q Consensus 416 ~~~----~~~lV~Ey~~~GsL~~~L---------------------------~~~-g--~~~~~~~~~~i~~~------~ 455 (584)
..+ ..++||||+ +|+|.+++ |.. | |+++++.|+.+..+ .
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~ 175 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLI 175 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEE
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcc
Confidence 754 689999999 88886554 443 3 56777777776432 2
Q ss_pred eEEecCCCcc--------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCC-cHHHHHHHHh
Q 007935 456 TIVTSGTGSR--------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGK-GLESLVRKAF 526 (584)
Q Consensus 456 ~~~~~~~~~~--------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~-~l~~~~~~~~ 526 (584)
.++..++|.. ...||+.|+|||++.. ..++.++|||||||++|||+||+.||........ .-........
T Consensus 176 ~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 254 (373)
T 1q8y_A 176 QIKIADLGNACWYDEHYTNSIQTREYRSPEVLLG-APWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQII 254 (373)
T ss_dssp EEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHT-CCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHH
T ss_pred eEEEcccccccccCCCCCCCCCCccccCcHHHhC-CCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHH
Confidence 5667777643 2468999999999554 6799999999999999999999999985432211 0111111111
Q ss_pred hcCCCCccc--------------------cC----hhhhhh-----hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 527 RERRPLSEV--------------------ID----PALVKE-----IHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 527 ~~~~~~~~~--------------------~d----~~~~~~-----~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.....++.. +. ..+... .........+.+++.+||+.||++|||+.|+++
T Consensus 255 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 333 (373)
T 1q8y_A 255 ELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN 333 (373)
T ss_dssp HHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred HhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhh
Confidence 100000000 00 000000 011234567889999999999999999999985
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-26 Score=260.10 Aligned_cols=200 Identities=29% Similarity=0.380 Sum_probs=165.5
Q ss_pred cccCCCCchHHHHHHHHHHHhcccCCCCCCCCCCCCCCCCCcceeeEecCCCEEEEEcCCCCCccc---CC---------
Q 007935 15 PAPLCFSLNQDGLALLALKAAIAQDPTRALDSWSESDSTPCHWSGIHCIRNRVTSLYLPNRNLTGY---MP--------- 82 (584)
Q Consensus 15 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~w~~~~~~~c~w~gv~c~~~~v~~l~l~~~~l~~~---~~--------- 82 (584)
.++++++.++|.+||++||+++. ||. .+++|.. +.+||.|.||+|+.++|+.|+|+++++.|. +|
T Consensus 3 ~~~~~~~~~~~~~all~~k~~~~-~~~-~l~~W~~-~~~~C~w~gv~C~~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L 79 (768)
T 3rgz_A 3 QASPSQSLYREIHQLISFKDVLP-DKN-LLPDWSS-NKNPCTFDGVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGL 79 (768)
T ss_dssp -----CCHHHHHHHHHHHHTTCS-CTT-SSTTCCT-TSCGGGSTTEEEETTEEEEEECTTSCCCEEHHHHHHHTTTCTTC
T ss_pred cCccccCCHHHHHHHHHHHhhCC-Ccc-cccCCCC-CCCCcCCcceEECCCcEEEEECCCCCcCCccCccChhHhccCcc
Confidence 44555667889999999999997 777 8999974 467899999999988999999999999886 43
Q ss_pred --------------ccccCCCCCCEEEccCCCCCCCCcc--cccCCCCCCEEecCCCcccCCCCccc-CCCCCCCeeecc
Q 007935 83 --------------SELGLLNSLTRLSLASNNFSKPIPA--NLFNATNLVYLDLAHNSFCGPIPDRI-KTLKNLTHLDLS 145 (584)
Q Consensus 83 --------------~~~~~l~~L~~L~l~~n~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~p~~~-~~l~~L~~L~ls 145 (584)
+.|+.+++|++|+|++|.++|.+|. .+.++++|++|+|++|++++.+|..+ .++++|++|||+
T Consensus 80 ~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls 159 (768)
T 3rgz_A 80 ESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLS 159 (768)
T ss_dssp CEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECC
T ss_pred cccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECC
Confidence 5788889999999999999998888 89999999999999999998888776 789999999999
Q ss_pred cCCCCCCchHH---hhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCC
Q 007935 146 SNLLNGSLPEF---LLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 146 ~N~l~~~~p~~---~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
+|++++..|.. +.++++|+ .|++++|++++.+|. ..+++|++|+|++|.+++.+|.+..+.++..+.+++|.
T Consensus 160 ~n~l~~~~~~~~~~~~~l~~L~-~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~n~ 234 (768)
T 3rgz_A 160 ANSISGANVVGWVLSDGCGELK-HLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNK 234 (768)
T ss_dssp SSCCEEETHHHHHHTTCCTTCC-EEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCBCTTCCSCCEEECCSSC
T ss_pred CCccCCcCChhhhhhccCCCCC-EEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcccccCCCCCEEECcCCc
Confidence 99999888877 67788888 888888888776653 67788888888888888877766666666666666664
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.5e-26 Score=241.53 Aligned_cols=205 Identities=17% Similarity=0.186 Sum_probs=144.6
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
..++||+|+||+||.....++ +.||||++..... +.+.+|+++++++ +|||||++++++.+.+..++||
T Consensus 28 ~~~~LG~G~~G~V~~~~~~~~------~~vAvK~~~~~~~----~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~ 97 (432)
T 3p23_A 28 PKDVLGHGAEGTIVYRGMFDN------RDVAVKRILPECF----SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAI 97 (432)
T ss_dssp EEEEEEECGGGCEEEEEESSS------SEEEEEEECTTTE----EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cCCeeecCcCEEEEEEEEeCC------eEEEEEEECHHHH----HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEE
Confidence 346899999999654444444 7899999976422 4467899999999 8999999999999999999999
Q ss_pred ecccCCcHHHHHh--------------------------cc--cccccCCCCcccccc-----CeEEecCCCcc------
Q 007935 425 DFIRNGSLYAALH--------------------------GF--GLNRLLPGTSKVTKN-----ETIVTSGTGSR------ 465 (584)
Q Consensus 425 Ey~~~GsL~~~L~--------------------------~~--g~~~~~~~~~~i~~~-----~~~~~~~~~~~------ 465 (584)
|||+ |+|.+++. .. -|+++++.|+.+..+ ..++..++|..
T Consensus 98 E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~ 176 (432)
T 3p23_A 98 ELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVG 176 (432)
T ss_dssp ECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC---
T ss_pred ECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCC
Confidence 9996 58866653 33 467888888877432 23446666532
Q ss_pred --------cccCCCcccCcccccc--CCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCCCcc
Q 007935 466 --------ISAISNVYLAPEARIY--GSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSE 534 (584)
Q Consensus 466 --------~~~gt~~y~aPE~~~~--~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 534 (584)
...||+.|+|||++.. +..++.++|||||||++|||+| |+.||..... ........ ... ..
T Consensus 177 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~------~~~~~~~~-~~~-~~ 248 (432)
T 3p23_A 177 RHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ------RQANILLG-ACS-LD 248 (432)
T ss_dssp ---------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT------HHHHHHTT-CCC-CT
T ss_pred CcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH------HHHHHHhc-cCC-cc
Confidence 1358999999998653 3567889999999999999999 9999864211 11111111 111 11
Q ss_pred ccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 535 VIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 535 ~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
...+.. .....+.+++.+||+.||++|||+.||++
T Consensus 249 ~~~~~~-------~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 249 CLHPEK-------HEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp TSCTTC-------HHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccCccc-------cccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 111111 11223567889999999999999999984
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=5e-26 Score=232.03 Aligned_cols=220 Identities=17% Similarity=0.206 Sum_probs=153.1
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCc------eeeeeEEEEeCCce
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPN------IVRLKAFYYANDEK 420 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~Hpn------IV~l~g~~~~~~~~ 420 (584)
.+.||+|+||.||+|.....++ +.||||+++... ...+.+.+|+.++++++|+| ++.+++++...+..
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~----~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 97 (355)
T 2eu9_A 24 VGNLGEGTFGKVVECLDHARGK----SQVALKIIRNVG--KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHM 97 (355)
T ss_dssp EEEEEEETTEEEEEEEETTTTT----EEEEEEEECSCH--HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEE
T ss_pred EEEeeccCCeEEEEEEecCCCc----eEEEEEEEcccc--cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeE
Confidence 4679999999999999865431 689999997532 23477899999999998766 99999999999999
Q ss_pred eEeeecccCCcHHHHH---------------------------hccc--ccccCCCCccc-------------------c
Q 007935 421 LLISDFIRNGSLYAAL---------------------------HGFG--LNRLLPGTSKV-------------------T 452 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~~L---------------------------~~~g--~~~~~~~~~~i-------------------~ 452 (584)
++||||+ +|+|.+++ |+.| |+++++.|+.+ .
T Consensus 98 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~ 176 (355)
T 2eu9_A 98 CIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSV 176 (355)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEE
T ss_pred EEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeccccccccccccccccccc
Confidence 9999999 55664443 4333 57777788776 3
Q ss_pred ccCeEEecCCCcc--------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Q 007935 453 KNETIVTSGTGSR--------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRK 524 (584)
Q Consensus 453 ~~~~~~~~~~~~~--------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~ 524 (584)
.+..++..++|.. ...||+.|+|||++.. ..++.++|||||||++|||+||+.||...... .....+..
T Consensus 177 ~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~g~~pf~~~~~~--~~~~~~~~ 253 (355)
T 2eu9_A 177 KNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILE-LGWAQPCDVWSIGCILFEYYRGFTLFQTHENR--EHLVMMEK 253 (355)
T ss_dssp SCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHH
T ss_pred CCCcEEEeecCccccccccccCCcCCCcccCCeeeec-CCCCCccchHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHH
Confidence 3456677777643 2468999999999554 68999999999999999999999999753211 11111122
Q ss_pred HhhcCCC-------Cc-------cccChhhhh--------------hhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 525 AFRERRP-------LS-------EVIDPALVK--------------EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 525 ~~~~~~~-------~~-------~~~d~~~~~--------------~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.....+. .. ...+..... ..........+.+++.+||+.||++|||+.|+++
T Consensus 254 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 333 (355)
T 2eu9_A 254 ILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALL 333 (355)
T ss_dssp HHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred HcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 1111000 00 000000000 0001122346788999999999999999999974
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=5.1e-27 Score=253.10 Aligned_cols=220 Identities=19% Similarity=0.150 Sum_probs=154.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEe------CCce
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYA------NDEK 420 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~------~~~~ 420 (584)
.+.||+|+||.||+|....++ +.||||+++........+.|.+|++++++++|||||++++++.. .+..
T Consensus 19 ~~~LG~G~fG~Vyla~~~~tg-----~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~ 93 (676)
T 3qa8_A 19 KERLGTGGFGYVLRWIHQDTG-----EQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93 (676)
T ss_dssp CCCCCBCSSSBCCCCCCTTTT-----CCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred EEEEeeCCCeEEEEEEECCCC-----cEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence 457999999999999987665 78999999875455556789999999999999999999998765 6678
Q ss_pred eEeeecccCCcHHHHHhc----------------------------c--cccccCCCCccccccCe---EEecCCCccc-
Q 007935 421 LLISDFIRNGSLYAALHG----------------------------F--GLNRLLPGTSKVTKNET---IVTSGTGSRI- 466 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~~L~~----------------------------~--g~~~~~~~~~~i~~~~~---~~~~~~~~~~- 466 (584)
++||||+++|+|.++++. . .|+++.+.|+.+..++. ++..++|...
T Consensus 94 ~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~ 173 (676)
T 3qa8_A 94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKE 173 (676)
T ss_dssp CCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCB
T ss_pred EEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEcccccccc
Confidence 999999999999877643 2 36777888887765543 5566665332
Q ss_pred ---------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHh-----------
Q 007935 467 ---------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF----------- 526 (584)
Q Consensus 467 ---------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~----------- 526 (584)
..||..|+|||++. +..++.++|||||||++|||+||+.||.... ....|.....
T Consensus 174 ~~~~~~~~~~~gt~~Y~APE~l~-~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~----~~~~~~~~i~~~~~~~~~~~~ 248 (676)
T 3qa8_A 174 LDQGELCTEFVGTLQYLAPELLE-QKKYTVTVDYWSFGTLAFECITGFRPFLPNW----QPVQWHGKVREKSNEHIVVYD 248 (676)
T ss_dssp TTSCCCCCCCCSCCTTCSSCSSC-CSCCSTTHHHHHHHHHHHHHHSSCSSCCSSC----HHHHSSTTCC------CCSCC
T ss_pred cccccccccccCCcccCChHHhc-cCCCCchhHHHHHHHHHHHHHHCCCCCCccc----chhhhhhhhhcccchhhhhhh
Confidence 36899999999954 4689999999999999999999999996421 1111100000
Q ss_pred --hcCCCCccccC-h-hhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHH-----HHHHHhh
Q 007935 527 --RERRPLSEVID-P-ALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV-----SESLDRV 581 (584)
Q Consensus 527 --~~~~~~~~~~d-~-~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev-----~~~L~~i 581 (584)
.....+..... + .+.. .....+.+++.+||+.||++|||+.|+ .+.++.+
T Consensus 249 ~l~g~~~~~~~lp~p~~l~~-----~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~i 307 (676)
T 3qa8_A 249 DLTGAVKFSSVLPTPNHLSG-----ILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSI 307 (676)
T ss_dssp CCSSSCCCCSSSCCSCCCCG-----GGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHH
T ss_pred hhccccccccccCCchhhch-----hhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHH
Confidence 00000000000 0 0100 122456778999999999999999884 4555544
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.4e-26 Score=253.16 Aligned_cols=203 Identities=22% Similarity=0.244 Sum_probs=153.9
Q ss_pred ceeceeecCceEEEEEecC-CCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCc-----e
Q 007935 347 AYVVGKSKNGIMYKVVVGR-GSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDE-----K 420 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~-~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~-----~ 420 (584)
.+.||+|+||.||+|.... ++ +.||||++.........+.|.+|++++++++|||||++++++.+.+. .
T Consensus 85 ~~~lg~G~~g~Vy~a~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 85 KGCIAHGGLGWIYLALDRNVNG-----RPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp EEEEEEETTEEEEEEEEGGGTT-----EEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred EEEEeeCCCeEEEEEEEcCCCC-----cEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 4579999999999999865 33 89999999765444455789999999999999999999999998766 7
Q ss_pred eEeeecccCCcHH-----------------------HHHhccc--ccccCCCCccccccCeEEecCCCcc-------ccc
Q 007935 421 LLISDFIRNGSLY-----------------------AALHGFG--LNRLLPGTSKVTKNETIVTSGTGSR-------ISA 468 (584)
Q Consensus 421 ~lV~Ey~~~GsL~-----------------------~~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~-------~~~ 468 (584)
|+||||+++|+|. +|||..| |+++++.|+.+..+ .++..|||.. ...
T Consensus 160 ~lv~E~~~g~~L~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~~~~~ 238 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSFGYLY 238 (681)
T ss_dssp EEEEECCCCEECC----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS-CEEECCCTTCEETTCCSCCC
T ss_pred EEEEEeCCCCcHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC-cEEEEecccchhcccCCccC
Confidence 9999999999984 4455544 68888888887665 6677787743 246
Q ss_pred CCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHH
Q 007935 469 ISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKR 548 (584)
Q Consensus 469 gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 548 (584)
||+.|||||++.. .++.++|||||||++|||++|..||.+..... +.. ..+. ..
T Consensus 239 gt~~y~aPE~~~~--~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~----------------~~~-~~~~-------~~ 292 (681)
T 2pzi_A 239 GTPGFQAPEIVRT--GPTVATDIYTVGRTLAALTLDLPTRNGRYVDG----------------LPE-DDPV-------LK 292 (681)
T ss_dssp CCTTTSCTTHHHH--CSCHHHHHHHHHHHHHHHHSCCCEETTEECSS----------------CCT-TCHH-------HH
T ss_pred CCccccCHHHHcC--CCCCceehhhhHHHHHHHHhCCCCCccccccc----------------ccc-cccc-------cc
Confidence 8999999998654 35899999999999999999998876421111 000 0010 01
Q ss_pred HHHHHHHHHhcccCCCCCCCCC-hHHHHHHHHhh
Q 007935 549 QVLATFHIALNCTELDPEFRPR-MRTVSESLDRV 581 (584)
Q Consensus 549 ~~~~~~~l~~~Cl~~~P~~RPt-~~ev~~~L~~i 581 (584)
....+.+++.+||+.||++||+ ++++...|..+
T Consensus 293 ~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 326 (681)
T 2pzi_A 293 TYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV 326 (681)
T ss_dssp HCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred cCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence 1235667888999999999995 55566666554
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.1e-26 Score=255.36 Aligned_cols=194 Identities=25% Similarity=0.359 Sum_probs=167.9
Q ss_pred CCCchHHHHHHHHHHHhcccCCCCCCCCCCCCC------CCCCcc------------eeeEecC-CCEEEEEcCCCCCcc
Q 007935 19 CFSLNQDGLALLALKAAIAQDPTRALDSWSESD------STPCHW------------SGIHCIR-NRVTSLYLPNRNLTG 79 (584)
Q Consensus 19 ~~~~~~~~~~l~~~~~~~~~~~~~~l~~w~~~~------~~~c~w------------~gv~c~~-~~v~~l~l~~~~l~~ 79 (584)
.+...+|..||++||+++. +| +|+.++ +++|.| .||+|+. ++|+.|+|++|+|+|
T Consensus 264 ~~~~~~d~~ALl~~k~~l~-~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G 337 (876)
T 4ecn_A 264 TAEYIKDYKALKAIWEALD-GK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKG 337 (876)
T ss_dssp CCHHHHHHHHHHHHHHHTT-GG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEE
T ss_pred cccchHHHHHHHHHHHHcC-CC-----CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCC
Confidence 3455689999999999995 44 786543 334999 9999984 799999999999999
Q ss_pred cCCccccCCCCCCEEEc-cCCCCCCC------------------------------------------------------
Q 007935 80 YMPSELGLLNSLTRLSL-ASNNFSKP------------------------------------------------------ 104 (584)
Q Consensus 80 ~~~~~~~~l~~L~~L~l-~~n~l~~~------------------------------------------------------ 104 (584)
.+|+.|++|++|++|+| ++|.++|.
T Consensus 338 ~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i 417 (876)
T 4ecn_A 338 RVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPI 417 (876)
T ss_dssp EECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCC
T ss_pred cCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccccc
Confidence 99999999999999999 77765444
Q ss_pred ----------------------CcccccCCCCCCEEecCCCcccC-----------------CCCcccC--CCCCCCeee
Q 007935 105 ----------------------IPANLFNATNLVYLDLAHNSFCG-----------------PIPDRIK--TLKNLTHLD 143 (584)
Q Consensus 105 ----------------------~p~~~~~l~~L~~L~l~~N~l~~-----------------~~p~~~~--~l~~L~~L~ 143 (584)
+|..|.++++|++|+|++|+|+| .+|..++ ++++|+.|+
T Consensus 418 ~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~ 497 (876)
T 4ecn_A 418 KKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVE 497 (876)
T ss_dssp CCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEE
T ss_pred ccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEE
Confidence 88889999999999999999998 3899988 999999999
Q ss_pred cccCCCCCCchHHhhccccCccEEEecccc-Ccc-ccCccccCCC-------CCcEEEeecCCCccCCCC---CCCcccc
Q 007935 144 LSSNLLNGSLPEFLLDLRALTGTLNLSFNQ-FSG-QIPEMYGHFP-------VMVSLDLRNNNLSGEIPQ---VGSLLNQ 211 (584)
Q Consensus 144 ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~-l~~-~~p~~~~~l~-------~L~~L~l~~N~l~~~~p~---~~~~~~~ 211 (584)
|++|.+.+.+|..|.++++|+ .|+|++|+ |+| .+|..+++++ +|+.|+|++|.++ .+|. +..+.++
T Consensus 498 Ls~N~l~~~iP~~l~~L~~L~-~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L 575 (876)
T 4ecn_A 498 LYNCPNMTQLPDFLYDLPELQ-SLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKL 575 (876)
T ss_dssp EESCTTCCSCCGGGGGCSSCC-EEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTC
T ss_pred CcCCCCCccChHHHhCCCCCC-EEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCC
Confidence 999999999999999999999 99999998 998 8888777665 9999999999999 6665 6677777
Q ss_pred CCcccCCCC
Q 007935 212 GPTAFSGNP 220 (584)
Q Consensus 212 ~~~~~~~n~ 220 (584)
..+.+++|.
T Consensus 576 ~~L~Ls~N~ 584 (876)
T 4ecn_A 576 GLLDCVHNK 584 (876)
T ss_dssp CEEECTTSC
T ss_pred CEEECCCCC
Confidence 777777775
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.92 E-value=5.1e-26 Score=229.09 Aligned_cols=199 Identities=21% Similarity=0.272 Sum_probs=177.5
Q ss_pred CCCchHHHHHHHHHHHhcccCCCCCCCCCC---CCCCCCCcceeeEecC----------CCEEEEEcCCCCCcccCCccc
Q 007935 19 CFSLNQDGLALLALKAAIAQDPTRALDSWS---ESDSTPCHWSGIHCIR----------NRVTSLYLPNRNLTGYMPSEL 85 (584)
Q Consensus 19 ~~~~~~~~~~l~~~~~~~~~~~~~~l~~w~---~~~~~~c~w~gv~c~~----------~~v~~l~l~~~~l~~~~~~~~ 85 (584)
+.+..+|..||++||.++..|+.+.+.+|. .....+|.|.|+.|.. .+|+.|+|++|+++ .+|..+
T Consensus 22 ~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l 100 (328)
T 4fcg_A 22 STALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQA 100 (328)
T ss_dssp -CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCG
T ss_pred cccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhh
Confidence 456677899999999999778777778894 4456789999999952 68999999999999 788899
Q ss_pred cCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhc------
Q 007935 86 GLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLD------ 159 (584)
Q Consensus 86 ~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~------ 159 (584)
+.+++|++|+|++|.|+ .+|..+..+++|++|+|++|+++ .+|..|.++++|++|+|++|++.+.+|..+..
T Consensus 101 ~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~ 178 (328)
T 4fcg_A 101 FRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGE 178 (328)
T ss_dssp GGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCC
T ss_pred hhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhh
Confidence 99999999999999999 79999999999999999999999 88999999999999999999999999988765
Q ss_pred ---cccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCCCC
Q 007935 160 ---LRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGL 222 (584)
Q Consensus 160 ---l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~l 222 (584)
+++|+ .|+|++|+++ .+|..++++++|+.|+|++|.+++.++.+..+.++..+.+++|...
T Consensus 179 ~~~l~~L~-~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~ 242 (328)
T 4fcg_A 179 HQGLVNLQ-SLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTAL 242 (328)
T ss_dssp EEESTTCC-EEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTC
T ss_pred hccCCCCC-EEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcch
Confidence 99999 9999999999 8899999999999999999999987777777778888888887644
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=8.1e-25 Score=217.63 Aligned_cols=196 Identities=19% Similarity=0.293 Sum_probs=138.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHH-HhcCCCceeeeeEEEEe----CCcee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAI-ARVQHPNIVRLKAFYYA----NDEKL 421 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l-~~l~HpnIV~l~g~~~~----~~~~~ 421 (584)
.++||+|+||.||+|.....+ +.||||+++.. +.+.+|++++ +..+||||+++++++.. .+..+
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 91 (299)
T 3m2w_A 23 SQVLGLGINGKVLQIFNKRTQ-----EKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 91 (299)
T ss_dssp EEEEEEETTEEEEEEEETTTC-----CEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred CcccccCCCeEEEEEEEcCCC-----cEEEEEEeccc------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence 467999999999999987765 89999999642 5678999988 55599999999999987 67789
Q ss_pred EeeecccCCcHHHHHhc---------------------------c--cccccCCCCccccc---cCeEEecCCCcccccC
Q 007935 422 LISDFIRNGSLYAALHG---------------------------F--GLNRLLPGTSKVTK---NETIVTSGTGSRISAI 469 (584)
Q Consensus 422 lV~Ey~~~GsL~~~L~~---------------------------~--g~~~~~~~~~~i~~---~~~~~~~~~~~~~~~g 469 (584)
+||||+++|+|.+++.. . -|+++++.|+.+.. +..++..++|..
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a---- 167 (299)
T 3m2w_A 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA---- 167 (299)
T ss_dssp EEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTC----
T ss_pred EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEeccccc----
Confidence 99999999999777643 2 35777778877766 556777777643
Q ss_pred CCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCcc-ccChhhhhhhhHHH
Q 007935 470 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSE-VIDPALVKEIHAKR 548 (584)
Q Consensus 470 t~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~d~~~~~~~~~~~ 548 (584)
.+. .+..++.++|||||||++|||+||+.||....... ... .......... ........ .
T Consensus 168 ------~~~--~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~~~-----~ 228 (299)
T 3m2w_A 168 ------KET--TGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA-----ISP-GMKTRIRMGQYEFPNPEWS-----E 228 (299)
T ss_dssp ------EEC--TTCGGGGHHHHHHHHHHHHHHHHSSCSCCC------------C-CSCCSSCTTCCSSCHHHHT-----T
T ss_pred ------ccc--ccccCCchhhHHHHHHHHHHHHHCCCCCCCCcchh-----hhH-HHHHHHhhccccCCchhcc-----c
Confidence 222 23578899999999999999999999997532211 000 0000000000 00100000 1
Q ss_pred HHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 549 QVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 549 ~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
....+.+++.+||+.||++|||+.|+++
T Consensus 229 ~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 229 VSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp SCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 1235667888899999999999999986
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.9e-25 Score=245.28 Aligned_cols=197 Identities=23% Similarity=0.330 Sum_probs=161.5
Q ss_pred CCchHHHHHHHHHHHhcccCCCC-------CCCCCCCCCCCCCcc---eeeEecC-CCEEEEEcCCCCCcccCCccccCC
Q 007935 20 FSLNQDGLALLALKAAIAQDPTR-------ALDSWSESDSTPCHW---SGIHCIR-NRVTSLYLPNRNLTGYMPSELGLL 88 (584)
Q Consensus 20 ~~~~~~~~~l~~~~~~~~~~~~~-------~l~~w~~~~~~~c~w---~gv~c~~-~~v~~l~l~~~~l~~~~~~~~~~l 88 (584)
+...+|..||.+++.++..+... ...+|..+ .++|.| .||+|+. ++|+.|+|++++++|.+|+.|++|
T Consensus 26 ~~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~-~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~~L 104 (636)
T 4eco_A 26 AEYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFN-KELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQL 104 (636)
T ss_dssp CHHHHHHHHHHHHHHHTTGGGCCCCC------CCCCCS-SCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEECGGGGGC
T ss_pred hhHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCC-CCcccccCCCCeEEcCCCCEEEEEecCcccCCcCChHHhcC
Confidence 34457899999999998644322 23479754 678999 9999975 699999999999999999999999
Q ss_pred CCCCEEEccCCC--------------------------------------------------------------------
Q 007935 89 NSLTRLSLASNN-------------------------------------------------------------------- 100 (584)
Q Consensus 89 ~~L~~L~l~~n~-------------------------------------------------------------------- 100 (584)
++|++|+|++|+
T Consensus 105 ~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~ 184 (636)
T 4eco_A 105 TELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLK 184 (636)
T ss_dssp TTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCC
T ss_pred ccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchh
Confidence 999999999884
Q ss_pred ----------CCCCCcccccCCCCCCEEecCCCcccCC-----------------CCcccC--CCCCCCeeecccCCCCC
Q 007935 101 ----------FSKPIPANLFNATNLVYLDLAHNSFCGP-----------------IPDRIK--TLKNLTHLDLSSNLLNG 151 (584)
Q Consensus 101 ----------l~~~~p~~~~~l~~L~~L~l~~N~l~~~-----------------~p~~~~--~l~~L~~L~ls~N~l~~ 151 (584)
|+| +|..|+++++|++|+|++|+|+|. +|..++ ++++|++|+|++|+++|
T Consensus 185 ~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~ 263 (636)
T 4eco_A 185 DTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLT 263 (636)
T ss_dssp TTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCS
T ss_pred hhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCc
Confidence 345 788899999999999999999986 898888 99999999999999998
Q ss_pred CchHHhhccccCccEEEecccc-Ccc-ccCccccCC------CCCcEEEeecCCCccCCCC---CCCccccCCcccCCCC
Q 007935 152 SLPEFLLDLRALTGTLNLSFNQ-FSG-QIPEMYGHF------PVMVSLDLRNNNLSGEIPQ---VGSLLNQGPTAFSGNP 220 (584)
Q Consensus 152 ~~p~~~~~l~~L~~~l~l~~N~-l~~-~~p~~~~~l------~~L~~L~l~~N~l~~~~p~---~~~~~~~~~~~~~~n~ 220 (584)
.+|..+.++++|+ .|+|++|+ ++| .+|..++++ ++|+.|+|++|+++ .+|. +..+.++..+.+++|.
T Consensus 264 ~~p~~l~~l~~L~-~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~ 341 (636)
T 4eco_A 264 KLPTFLKALPEMQ-LINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQ 341 (636)
T ss_dssp SCCTTTTTCSSCC-EEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCC
T ss_pred cChHHHhcCCCCC-EEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCc
Confidence 9999899999998 89999998 888 788777776 78888888888888 5554 5566666666666664
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.2e-24 Score=244.32 Aligned_cols=168 Identities=39% Similarity=0.711 Sum_probs=147.2
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCccccc----------------------------------
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF---------------------------------- 110 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~---------------------------------- 110 (584)
.+++.|+|++|+++|.+|..++.+++|+.|+|++|.++|.+|..++
T Consensus 514 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (768)
T 3rgz_A 514 ENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNL 593 (768)
T ss_dssp TTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEE
T ss_pred CCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccc
Confidence 4577777777777777777777777888888888777777765443
Q ss_pred ------------------------------------CCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCch
Q 007935 111 ------------------------------------NATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLP 154 (584)
Q Consensus 111 ------------------------------------~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p 154 (584)
.+++|+.|+|++|+++|.+|..|+++++|+.|||++|+|+|.+|
T Consensus 594 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip 673 (768)
T 3rgz_A 594 LEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIP 673 (768)
T ss_dssp EECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCC
T ss_pred cccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCC
Confidence 24668889999999999999999999999999999999999999
Q ss_pred HHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCCCCCCCCCCCCCCCC
Q 007935 155 EFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGLCGFPLQSPCPEP 234 (584)
Q Consensus 155 ~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~l~~~~~~~~C~~~ 234 (584)
..++++++|+ .|||++|+++|.+|..++++++|++|+|++|+++|.+|..+.+.++...+|.||+++||.|.. +|...
T Consensus 674 ~~l~~L~~L~-~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~-~C~~~ 751 (768)
T 3rgz_A 674 DEVGDLRGLN-ILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP-RCDPS 751 (768)
T ss_dssp GGGGGCTTCC-EEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSC-CCCSC
T ss_pred hHHhCCCCCC-EEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCc-CCCCC
Confidence 9999999999 999999999999999999999999999999999999999888999999999999999999876 78643
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.90 E-value=4.9e-24 Score=221.65 Aligned_cols=201 Identities=13% Similarity=0.091 Sum_probs=138.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCC-Cceeee---------e---
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQH-PNIVRL---------K--- 411 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~H-pnIV~l---------~--- 411 (584)
.++||+|+||+||+|+....+ +.||||+++... .....+.|.+|+.+++.++| +|.... .
T Consensus 83 ~~~LG~G~fG~Vy~a~~~~~g-----~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 83 GTVLGQEDPYAYLEATDQETG-----ESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEETTEEEEEEEETTTC-----CEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred ecccccCCCEEEEEEEecCCC-----CceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 468999999999999987665 799999998442 22235789999999999987 322111 1
Q ss_pred ---------EEEEe-----CCceeEeeecccCCcHHHHH--------------------------------hcc--cccc
Q 007935 412 ---------AFYYA-----NDEKLLISDFIRNGSLYAAL--------------------------------HGF--GLNR 443 (584)
Q Consensus 412 ---------g~~~~-----~~~~~lV~Ey~~~GsL~~~L--------------------------------~~~--g~~~ 443 (584)
.++.. ....+++|+++ +|+|.+++ |+. .|+|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrD 236 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTY 236 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 11111 12356777765 56776555 222 4788
Q ss_pred cCCCCccccccCeEEecCCCccc--------ccCCCcccCccccc---------cCCCCCCccchhhHHHHHHHHHhCCC
Q 007935 444 LLPGTSKVTKNETIVTSGTGSRI--------SAISNVYLAPEARI---------YGSKFTQKCDVYSFGIVLLEILTGRL 506 (584)
Q Consensus 444 ~~~~~~~i~~~~~~~~~~~~~~~--------~~gt~~y~aPE~~~---------~~~~~~~ksDV~SfGvvl~ElltG~~ 506 (584)
+++.|+.+..++.++..|||... ..| +.|||||++. .+..++.++|||||||++|||+||+.
T Consensus 237 iKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~ 315 (413)
T 3dzo_A 237 LRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADL 315 (413)
T ss_dssp CCGGGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSC
T ss_pred cccceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCC
Confidence 99999998888888888887532 357 8999999862 44568899999999999999999999
Q ss_pred CCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 507 PDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 507 p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
||........ ........ ..++ ..+.+++.+||+.||++|||+.|+++
T Consensus 316 Pf~~~~~~~~-----~~~~~~~~----~~~~-------------~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 316 PNTDDAALGG-----SEWIFRSC----KNIP-------------QPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp CCCTTGGGSC-----SGGGGSSC----CCCC-------------HHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCcchhhh-----HHHHHhhc----ccCC-------------HHHHHHHHHHccCChhhCcCHHHHHh
Confidence 9975322110 00011110 1112 24556888899999999999888754
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=99.89 E-value=7.7e-24 Score=214.24 Aligned_cols=205 Identities=11% Similarity=0.112 Sum_probs=144.4
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-------cchhhHhHHHHHHHHHhcC---------CCceee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-------ATWRFKDFESEVEAIARVQ---------HPNIVR 409 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-------~~~~~~~f~~Ei~~l~~l~---------HpnIV~ 409 (584)
..+.||+|+||.||+|+. .+ +.||||+++... .....+.+.+|+.++++++ |||||+
T Consensus 24 ~~~~lG~G~~g~V~~~~~-~~------~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 24 RCEKIGEGVFGEVFQTIA-DH------TPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp TCEEEEEETTEEEEEEEE-TT------EEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred heeeecccCceEEEEEEe-CC------ceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 357899999999999997 33 899999998652 1223477999999999986 777777
Q ss_pred eeEEEE------------------------------eCCceeEeeecccCCcH------------------------HHH
Q 007935 410 LKAFYY------------------------------ANDEKLLISDFIRNGSL------------------------YAA 435 (584)
Q Consensus 410 l~g~~~------------------------------~~~~~~lV~Ey~~~GsL------------------------~~~ 435 (584)
+.+.+. +.+..++||||+++|++ .+|
T Consensus 97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~~~~~~~~~~i~~qi~~aL~~ 176 (336)
T 2vuw_A 97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAV 176 (336)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTTCCCHHHHHHHHHHHHHHHHH
T ss_pred hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 777653 26789999999999965 366
Q ss_pred Hh-cc--cccccCCCCccccccC--------------------eEEecCCCccc------ccCCCcccCccccccCCCCC
Q 007935 436 LH-GF--GLNRLLPGTSKVTKNE--------------------TIVTSGTGSRI------SAISNVYLAPEARIYGSKFT 486 (584)
Q Consensus 436 L~-~~--g~~~~~~~~~~i~~~~--------------------~~~~~~~~~~~------~~gt~~y~aPE~~~~~~~~~ 486 (584)
|| +. -|+|++++|+.+..++ .++..|||... ..||+.|||||++. +.. +
T Consensus 177 lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~~~~gt~~y~aPE~~~-g~~-~ 254 (336)
T 2vuw_A 177 AEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDEDLFT-GDG-D 254 (336)
T ss_dssp HHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETTEEECCCCTTCSGGGC-CCS-S
T ss_pred HHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCCcEEEeecccChhhhc-CCC-c
Confidence 77 54 4788999999887775 77888888543 47899999999955 334 8
Q ss_pred CccchhhHHHH-HHHHHhCCCCCCCCCCCCCcH-HHHHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCC
Q 007935 487 QKCDVYSFGIV-LLEILTGRLPDAGPENDGKGL-ESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELD 564 (584)
Q Consensus 487 ~ksDV~SfGvv-l~ElltG~~p~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~ 564 (584)
.++||||+|++ .+++++|..||.. ... ........... .......+... .....++.+++.+||+.|
T Consensus 255 ~~~Diwsl~~~~~~~~~~g~~p~~~-----~~~~~~~~~~~~~~~-~~~~~~~~~~~-----~~~s~~~~dli~~~L~~d 323 (336)
T 2vuw_A 255 YQFDIYRLMKKENNNRWGEYHPYSN-----VLWLHYLTDKMLKQM-TFKTKCNTPAM-----KQIKRKIQEFHRTMLNFS 323 (336)
T ss_dssp HHHHHHHHHHHHHTTCTTSCCTHHH-----HHHHHHHHHHHHHTC-CCSSCCCSHHH-----HHHHHHHHHHHHHGGGSS
T ss_pred cceehhhhhCCCCcccccccCCCcc-----hhhhhHHHHhhhhhh-ccCcccchhhh-----hhcCHHHHHHHHHHhccC
Confidence 89999998777 7788899999852 001 11111222111 11111111111 123346778999999976
Q ss_pred CCCCCChHHHH
Q 007935 565 PEFRPRMRTVS 575 (584)
Q Consensus 565 P~~RPt~~ev~ 575 (584)
|+.|++
T Consensus 324 -----sa~e~l 329 (336)
T 2vuw_A 324 -----SATDLL 329 (336)
T ss_dssp -----SHHHHH
T ss_pred -----CHHHHH
Confidence 898887
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.88 E-value=2.5e-22 Score=194.26 Aligned_cols=159 Identities=22% Similarity=0.206 Sum_probs=142.5
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
..++.|+|++|++++..+..|..+++|++|+|++|.|++..|..|..+++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 35 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 114 (251)
T 3m19_A 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 114 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEc
Confidence 35889999999999988889999999999999999999988888999999999999999999877788999999999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCC-CCCCccccCCcccCCCCCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIP-QVGSLLNQGPTAFSGNPGLC 223 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~~~~~~~~~~~n~~l~ 223 (584)
++|+|++..+..|..+++|+ .|+|++|+|++..+..|+.+++|+.|+|++|.|++.+| .+..+.++..+.+.+|+..|
T Consensus 115 ~~N~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 115 GGNQLKSLPSGVFDRLTKLK-ELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp CSSCCCCCCTTTTTTCTTCC-EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCT
T ss_pred CCCcCCCcChhHhccCCccc-EEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeC
Confidence 99999976677788999999 99999999998777789999999999999999998877 35566778888899998766
Q ss_pred C
Q 007935 224 G 224 (584)
Q Consensus 224 ~ 224 (584)
.
T Consensus 194 ~ 194 (251)
T 3m19_A 194 S 194 (251)
T ss_dssp T
T ss_pred C
Confidence 5
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.2e-22 Score=203.05 Aligned_cols=164 Identities=27% Similarity=0.423 Sum_probs=124.3
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCC-CCCEEecCCCccc-----------------
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNAT-NLVYLDLAHNSFC----------------- 126 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~-~L~~L~l~~N~l~----------------- 126 (584)
.+++.|+|++|++++.+|..|+.+++|++|+|++|.|++.+|..+..++ +|++|+|++|+++
T Consensus 125 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~L 204 (313)
T 1ogq_A 125 KTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDL 204 (313)
T ss_dssp TTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEEC
T ss_pred CCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCcccEEEC
Confidence 3566666666666666666666666666666666666666666666555 5555555555554
Q ss_pred ------CCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCcc
Q 007935 127 ------GPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSG 200 (584)
Q Consensus 127 ------~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 200 (584)
+.+|..|..+++|+.|+|++|.+++.+|. +..+++|+ .|+|++|++++.+|..|..+++|+.|+|++|+++|
T Consensus 205 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~-~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 282 (313)
T 1ogq_A 205 SRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLN-GLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCG 282 (313)
T ss_dssp CSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCC-EEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEE
T ss_pred cCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCC-EEECcCCcccCcCChHHhcCcCCCEEECcCCcccc
Confidence 44555566677777777777777765555 77788888 99999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCcccCCCCCCCCCCCCCCC
Q 007935 201 EIPQVGSLLNQGPTAFSGNPGLCGFPLQSPC 231 (584)
Q Consensus 201 ~~p~~~~~~~~~~~~~~~n~~l~~~~~~~~C 231 (584)
.+|....+.++..+.+.+|+.+|+.|.. .|
T Consensus 283 ~ip~~~~l~~L~~l~l~~N~~lc~~p~~-~C 312 (313)
T 1ogq_A 283 EIPQGGNLQRFDVSAYANNKCLCGSPLP-AC 312 (313)
T ss_dssp ECCCSTTGGGSCGGGTCSSSEEESTTSS-CC
T ss_pred cCCCCccccccChHHhcCCCCccCCCCC-CC
Confidence 9998888888999999999999998765 45
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.5e-21 Score=185.93 Aligned_cols=150 Identities=24% Similarity=0.271 Sum_probs=125.1
Q ss_pred CCCCcceeeEecC-----------CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEec
Q 007935 52 STPCHWSGIHCIR-----------NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDL 120 (584)
Q Consensus 52 ~~~c~w~gv~c~~-----------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 120 (584)
.+.|+|.+|.|.. .+++.|+|++|++++..|..|..+++|++|+|++|+|+...+..|..+++|++|+|
T Consensus 16 ~~~Cs~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~L 95 (229)
T 3e6j_A 16 QCSCSGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDL 95 (229)
T ss_dssp TCEEETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCEEeCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEEC
Confidence 5779999999974 35788888888888888888888888888888888887655556778888888888
Q ss_pred CCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCcc
Q 007935 121 AHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSG 200 (584)
Q Consensus 121 ~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 200 (584)
++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|+ .|+|++|+|++..+..|..+++|+.|+|++|.+++
T Consensus 96 s~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 96 GTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLT-HLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCS-EEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCT
T ss_pred CCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCC-EEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccC
Confidence 888888766667788888888888888888 7888888888888 88888888887767778888888888888888887
Q ss_pred CCC
Q 007935 201 EIP 203 (584)
Q Consensus 201 ~~p 203 (584)
..+
T Consensus 174 ~c~ 176 (229)
T 3e6j_A 174 ECR 176 (229)
T ss_dssp TBG
T ss_pred Ccc
Confidence 654
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.1e-21 Score=182.04 Aligned_cols=153 Identities=22% Similarity=0.281 Sum_probs=134.9
Q ss_pred CCCCcceeeEecC-----------CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEec
Q 007935 52 STPCHWSGIHCIR-----------NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDL 120 (584)
Q Consensus 52 ~~~c~w~gv~c~~-----------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 120 (584)
.|.|.|.+|.|.. .+++.|+|++|++++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 4 ~C~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 83 (208)
T 2o6s_A 4 RCSCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNL 83 (208)
T ss_dssp TCEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCEECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEEC
Confidence 5778999999974 35899999999999777778899999999999999999765666789999999999
Q ss_pred CCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCcc
Q 007935 121 AHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSG 200 (584)
Q Consensus 121 ~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 200 (584)
++|++++..+..|..+++|++|+|++|+|++..+..+..+++|+ .|+|++|++++..+..|..+++|+.|+|++|.+++
T Consensus 84 s~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~-~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 162 (208)
T 2o6s_A 84 STNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLK-DLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 162 (208)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC-EEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC
T ss_pred CCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCC-EEECCCCccceeCHHHhccCCCccEEEecCCCeec
Confidence 99999977667789999999999999999977777789999999 99999999998777779999999999999999998
Q ss_pred CCCCC
Q 007935 201 EIPQV 205 (584)
Q Consensus 201 ~~p~~ 205 (584)
..|.+
T Consensus 163 ~~~~l 167 (208)
T 2o6s_A 163 TCPGI 167 (208)
T ss_dssp CTTTT
T ss_pred CCCCH
Confidence 87743
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.85 E-value=3e-21 Score=182.47 Aligned_cols=147 Identities=20% Similarity=0.248 Sum_probs=77.2
Q ss_pred CCCCcceeeEecC-----------CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEec
Q 007935 52 STPCHWSGIHCIR-----------NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDL 120 (584)
Q Consensus 52 ~~~c~w~gv~c~~-----------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 120 (584)
.|.|.|..|.|.. ..++.|+|++|+|++..+..|..+++|+.|+|++|+|++..|..|..+++|++|+|
T Consensus 8 ~C~C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L 87 (220)
T 2v9t_B 8 ACTCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVL 87 (220)
T ss_dssp TSEEETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEEC
T ss_pred CCEECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEEC
Confidence 4567787777753 13455555555555444445555555555555555555444555555555555555
Q ss_pred CCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCc
Q 007935 121 AHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLS 199 (584)
Q Consensus 121 ~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 199 (584)
++|+|++..+..|.++++|+.|+|++|+|++..|..|..+++|+ .|+|++|+|++..+..|..+++|+.|+|++|.++
T Consensus 88 s~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 88 YGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLN-LLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC-EEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCC-EEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 55555533333344555555555555555544455555555555 5555555555444444555555555555555544
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.5e-21 Score=183.04 Aligned_cols=149 Identities=19% Similarity=0.242 Sum_probs=84.3
Q ss_pred CCCCcceeeEecC-----------CCEEEEEcCCCCCcccCC-ccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEe
Q 007935 52 STPCHWSGIHCIR-----------NRVTSLYLPNRNLTGYMP-SELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLD 119 (584)
Q Consensus 52 ~~~c~w~gv~c~~-----------~~v~~l~l~~~~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 119 (584)
.|.|.|..+.|.. ..++.|+|++|+|++..+ ..|..+++|++|+|++|+|++..|..|..+++|++|+
T Consensus 8 ~C~C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~ 87 (220)
T 2v70_A 8 KCRCEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEIL 87 (220)
T ss_dssp TCEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CCEECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEE
Confidence 3556776666643 134555555555555533 3355555556666665555554444555555566666
Q ss_pred cCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCc
Q 007935 120 LAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLS 199 (584)
Q Consensus 120 l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 199 (584)
|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|+ .|+|++|+|++..|..|..+++|+.|+|++|.++
T Consensus 88 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 166 (220)
T 2v70_A 88 LTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVR-LLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFN 166 (220)
T ss_dssp CCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCS-EEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEE
T ss_pred CCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCC-EEECCCCcCCEECHHHhcCCCCCCEEEecCcCCc
Confidence 666655555555555555566666666655555555555555555 5556555555555555555555555555555555
Q ss_pred cC
Q 007935 200 GE 201 (584)
Q Consensus 200 ~~ 201 (584)
+.
T Consensus 167 c~ 168 (220)
T 2v70_A 167 CN 168 (220)
T ss_dssp CS
T ss_pred CC
Confidence 43
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.83 E-value=3.2e-20 Score=181.49 Aligned_cols=154 Identities=21% Similarity=0.224 Sum_probs=97.6
Q ss_pred CEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecc
Q 007935 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLS 145 (584)
Q Consensus 66 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls 145 (584)
.++.|+|++|++++..+..|..+++|++|+|++|.|+...+..|..+++|++|+|++|++++..+..|..+++|++|+|+
T Consensus 38 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 117 (270)
T 2o6q_A 38 DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLD 117 (270)
T ss_dssp TCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECC
T ss_pred CCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECC
Confidence 35666666666665555566667777777777777665333444566677777777777665555556666677777777
Q ss_pred cCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCC-CCCccccCCcccCCCC
Q 007935 146 SNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ-VGSLLNQGPTAFSGNP 220 (584)
Q Consensus 146 ~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~~~~~~~~~~~n~ 220 (584)
+|++++..|..|..+++|+ .|+|++|++++..+..|..+++|+.|+|++|.+++..+. +..+.++..+.+++|.
T Consensus 118 ~n~l~~~~~~~~~~l~~L~-~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 192 (270)
T 2o6q_A 118 RNQLKSLPPRVFDSLTKLT-YLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQ 192 (270)
T ss_dssp SSCCCCCCTTTTTTCTTCC-EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCccCeeCHHHhCcCcCCC-EEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCc
Confidence 7776655555666666666 677777766655555566666777777777766665553 3344455555555553
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.82 E-value=1.5e-19 Score=176.93 Aligned_cols=159 Identities=27% Similarity=0.263 Sum_probs=141.7
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|+|++|++++. +.+..+++|++|+|++|.+++..|..+..+++|++|+|++|++++..+..|..+++|++|+|
T Consensus 63 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 140 (272)
T 3rfs_A 63 PNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNL 140 (272)
T ss_dssp TTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEEC
Confidence 5799999999999873 57999999999999999999877777899999999999999999887788999999999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCC-CCCccccCCcccCCCCCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ-VGSLLNQGPTAFSGNPGLC 223 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~~~~~~~~~~~n~~l~ 223 (584)
++|++++..|..+..+++|+ .|+|++|++++..+..|+.+++|+.|+|++|.+++.+|. +..+.++..+.+.+|+..|
T Consensus 141 ~~n~l~~~~~~~~~~l~~L~-~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 219 (272)
T 3rfs_A 141 AHNQLQSLPKGVFDKLTNLT-ELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 219 (272)
T ss_dssp CSSCCCCCCTTTTTTCTTCC-EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCCccCccCHHHhccCccCC-EEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc
Confidence 99999977777789999999 999999999988888899999999999999999998875 4567778888899998776
Q ss_pred CCC
Q 007935 224 GFP 226 (584)
Q Consensus 224 ~~~ 226 (584)
..+
T Consensus 220 ~~~ 222 (272)
T 3rfs_A 220 TCP 222 (272)
T ss_dssp CTT
T ss_pred cCc
Confidence 543
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.4e-20 Score=174.03 Aligned_cols=132 Identities=27% Similarity=0.373 Sum_probs=118.2
Q ss_pred EEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcc-cccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeeccc
Q 007935 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPA-NLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSS 146 (584)
Q Consensus 68 ~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~ 146 (584)
+.|++++|+|+ .+|..+.. +|++|+|++|+|++..+. .|..+++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 45667777785 56766654 899999999999976554 488999999999999999998899999999999999999
Q ss_pred CCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCC
Q 007935 147 NLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIP 203 (584)
Q Consensus 147 N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 203 (584)
|+|++..|..|.++++|+ .|+|++|+|++.+|..|..+++|+.|+|++|.+++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLK-TLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCC-EEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCC-EEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 999988888899999999 99999999999999999999999999999999998765
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.81 E-value=8.4e-20 Score=172.53 Aligned_cols=161 Identities=20% Similarity=0.273 Sum_probs=142.1
Q ss_pred eeEecCCCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCC
Q 007935 59 GIHCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKN 138 (584)
Q Consensus 59 gv~c~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~ 138 (584)
+-.|.. ..+++++++++ .+|..+. ++|+.|+|++|+|++..+..|..+++|++|+|++|+|++..|..|.++++
T Consensus 8 ~C~C~~---~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~ 81 (220)
T 2v9t_B 8 ACTCSN---NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRS 81 (220)
T ss_dssp TSEEET---TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSS
T ss_pred CCEECC---CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcC
Confidence 467764 46899999998 5666554 68999999999999877778999999999999999999888999999999
Q ss_pred CCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCC-CCCccccCCcccC
Q 007935 139 LTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ-VGSLLNQGPTAFS 217 (584)
Q Consensus 139 L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~~~~~~~~~~ 217 (584)
|++|+|++|+|+...+..|.++++|+ .|+|++|+|++..|..|..+++|+.|+|++|.|++..+. +..+.++..+.+.
T Consensus 82 L~~L~Ls~N~l~~l~~~~f~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 160 (220)
T 2v9t_B 82 LNSLVLYGNKITELPKSLFEGLFSLQ-LLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLA 160 (220)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCC-EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECC
T ss_pred CCEEECCCCcCCccCHhHccCCCCCC-EEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeC
Confidence 99999999999965556678999999 999999999999999999999999999999999998874 5567778888999
Q ss_pred CCCCCCCCC
Q 007935 218 GNPGLCGFP 226 (584)
Q Consensus 218 ~n~~l~~~~ 226 (584)
+|+..|.+.
T Consensus 161 ~N~~~c~c~ 169 (220)
T 2v9t_B 161 QNPFICDCH 169 (220)
T ss_dssp SSCEECSGG
T ss_pred CCCcCCCCc
Confidence 999888654
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.1e-19 Score=175.66 Aligned_cols=161 Identities=23% Similarity=0.224 Sum_probs=143.9
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|+|++|+++...+..|..+++|++|+|++|.+++..+..|..+++|++|+|++|++++..+..|..+++|++|+|
T Consensus 61 ~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 140 (270)
T 2o6q_A 61 TKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSL 140 (270)
T ss_dssp TTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEEC
Confidence 57999999999999776777899999999999999999866677889999999999999999888888999999999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCC-CCCccccCCcccCCCCCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ-VGSLLNQGPTAFSGNPGLC 223 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~~~~~~~~~~~n~~l~ 223 (584)
++|.+++..+..|..+++|+ .|+|++|++++..+..|..+++|+.|+|++|.+++.++. +..+.++..+.+.+|+..|
T Consensus 141 s~n~l~~~~~~~~~~l~~L~-~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 141 GYNELQSLPKGVFDKLTSLK-ELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCC-EEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCCcCCccCHhHccCCcccc-eeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeC
Confidence 99999976666789999999 999999999988788899999999999999999987764 4556777888999999877
Q ss_pred CCC
Q 007935 224 GFP 226 (584)
Q Consensus 224 ~~~ 226 (584)
.+.
T Consensus 220 ~c~ 222 (270)
T 2o6q_A 220 TCN 222 (270)
T ss_dssp SSS
T ss_pred CCc
Confidence 753
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.3e-20 Score=190.46 Aligned_cols=173 Identities=24% Similarity=0.235 Sum_probs=146.6
Q ss_pred CCCCcceeeEecC-----------CCEEEEEcCCCCCcccCCcccc-CCCCCCEEEccCCCCCCCCcccccCCCCCCEEe
Q 007935 52 STPCHWSGIHCIR-----------NRVTSLYLPNRNLTGYMPSELG-LLNSLTRLSLASNNFSKPIPANLFNATNLVYLD 119 (584)
Q Consensus 52 ~~~c~w~gv~c~~-----------~~v~~l~l~~~~l~~~~~~~~~-~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 119 (584)
.|.|.|..+.|.. ..++.|+|++|+|++..+..+. .+++|+.|+|++|+|++..|..|..+++|++|+
T Consensus 15 ~C~C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~ 94 (361)
T 2xot_A 15 NCLCASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLD 94 (361)
T ss_dssp TCEEETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CCEECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEE
Confidence 3567888999964 3578999999999988888888 999999999999999987778899999999999
Q ss_pred cCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccc---cCCCCCcEEEeecC
Q 007935 120 LAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMY---GHFPVMVSLDLRNN 196 (584)
Q Consensus 120 l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~---~~l~~L~~L~l~~N 196 (584)
|++|+|++..+..|..+++|+.|+|++|+|++..|..|.++++|+ .|+|++|+|++..+..| ..+++|+.|+|++|
T Consensus 95 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~-~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N 173 (361)
T 2xot_A 95 LSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQ-KLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSN 173 (361)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCC-EEECCSSCCCSCCGGGTC----CTTCCEEECCSS
T ss_pred CCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCC-EEECCCCcCCeeCHHHhcCcccCCcCCEEECCCC
Confidence 999999987777899999999999999999988889999999999 99999999996555555 67999999999999
Q ss_pred CCccCCCC-CCCccc--cCCcccCCCCCCCCC
Q 007935 197 NLSGEIPQ-VGSLLN--QGPTAFSGNPGLCGF 225 (584)
Q Consensus 197 ~l~~~~p~-~~~~~~--~~~~~~~~n~~l~~~ 225 (584)
+|++..+. +..+.. +..+.+.+|+..|.+
T Consensus 174 ~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~C 205 (361)
T 2xot_A 174 KLKKLPLTDLQKLPAWVKNGLYLHNNPLECDC 205 (361)
T ss_dssp CCCCCCHHHHHHSCHHHHTTEECCSSCEECCH
T ss_pred CCCccCHHHhhhccHhhcceEEecCCCccCCc
Confidence 99975542 112222 245788999988875
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.81 E-value=2.9e-19 Score=176.30 Aligned_cols=150 Identities=29% Similarity=0.267 Sum_probs=82.7
Q ss_pred CEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecc
Q 007935 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLS 145 (584)
Q Consensus 66 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls 145 (584)
.++.|+|++|++++..+..|..+++|++|+|++|.|++ +|.. ..+++|++|+|++|+|+ .+|..+..+++|++|+|+
T Consensus 32 ~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~ 108 (290)
T 1p9a_G 32 DTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVS 108 (290)
T ss_dssp TCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EECC-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECC
T ss_pred CCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCc-ccCC-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECC
Confidence 56777777777776666667666666666666666654 2222 45555555555555555 445555555555555555
Q ss_pred cCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCC-CCccccCCcccCCC
Q 007935 146 SNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQV-GSLLNQGPTAFSGN 219 (584)
Q Consensus 146 ~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~~~~~~~~~~~n 219 (584)
+|+|++..|..|.++++|+ .|+|++|+|++..+..|..+++|+.|+|++|+|++.++.. ..+.++..+.+.+|
T Consensus 109 ~N~l~~l~~~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N 182 (290)
T 1p9a_G 109 FNRLTSLPLGALRGLGELQ-ELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQEN 182 (290)
T ss_dssp SSCCCCCCSSTTTTCTTCC-EEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSS
T ss_pred CCcCcccCHHHHcCCCCCC-EEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCC
Confidence 5555544444555555555 5555555555444444555555555555555555443322 22334444444444
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.80 E-value=2e-19 Score=169.93 Aligned_cols=162 Identities=18% Similarity=0.231 Sum_probs=141.6
Q ss_pred eeeEecCCCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCc-ccccCCCCCCEEecCCCcccCCCCcccCCC
Q 007935 58 SGIHCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIP-ANLFNATNLVYLDLAHNSFCGPIPDRIKTL 136 (584)
Q Consensus 58 ~gv~c~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l 136 (584)
.+..|.. +.+++++|+++. +|..+. ..+++|+|++|+|++..| ..|..+++|++|+|++|+|++..+..|.++
T Consensus 7 ~~C~C~~---~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l 80 (220)
T 2v70_A 7 EKCRCEG---TTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGA 80 (220)
T ss_dssp TTCEEET---TEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTC
T ss_pred CCCEECC---CEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCC
Confidence 4566764 489999999984 676654 457999999999998655 457899999999999999998888899999
Q ss_pred CCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCC-CCCCccccCCcc
Q 007935 137 KNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIP-QVGSLLNQGPTA 215 (584)
Q Consensus 137 ~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~~~~~~~~ 215 (584)
++|+.|+|++|+|++..|..|.++++|+ .|+|++|+|++..|..|..+++|+.|+|++|+|++..| .+..+.++..+.
T Consensus 81 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 159 (220)
T 2v70_A 81 SGVNEILLTSNRLENVQHKMFKGLESLK-TLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLN 159 (220)
T ss_dssp TTCCEEECCSSCCCCCCGGGGTTCSSCC-EEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccCccCHhHhcCCcCCC-EEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEE
Confidence 9999999999999988888899999999 99999999999999999999999999999999999877 455667788889
Q ss_pred cCCCCCCCCCC
Q 007935 216 FSGNPGLCGFP 226 (584)
Q Consensus 216 ~~~n~~l~~~~ 226 (584)
+.+|+..|.++
T Consensus 160 L~~N~l~c~c~ 170 (220)
T 2v70_A 160 LLANPFNCNCY 170 (220)
T ss_dssp CCSCCEECSGG
T ss_pred ecCcCCcCCCc
Confidence 99999887754
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.80 E-value=4e-22 Score=211.49 Aligned_cols=162 Identities=21% Similarity=0.153 Sum_probs=136.8
Q ss_pred CcceeeEecCCCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccC
Q 007935 55 CHWSGIHCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIK 134 (584)
Q Consensus 55 c~w~gv~c~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 134 (584)
|...++.-. ..++.|+|++|++++..+. .+++|+.|+|++|.|++..|..+..+++|++|+|++|+|++..|..+.
T Consensus 90 N~l~~l~~~-~~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~ 165 (487)
T 3oja_A 90 NYVQELLVG-PSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELA 165 (487)
T ss_dssp SEEEEEEEC-TTCCEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGG
T ss_pred CcCCCCCCC-CCcCEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHh
Confidence 344444422 5788999999999877654 468899999999999998898999999999999999999998888886
Q ss_pred -CCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCC
Q 007935 135 -TLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGP 213 (584)
Q Consensus 135 -~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~ 213 (584)
.+++|+.|+|++|.|++. |. +..+++|+ .|+|++|+|++.+| .|..+++|+.|+|++|.|++.++.+..+.++..
T Consensus 166 ~~l~~L~~L~Ls~N~l~~~-~~-~~~l~~L~-~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~lp~~l~~l~~L~~ 241 (487)
T 3oja_A 166 ASSDTLEHLNLQYNFIYDV-KG-QVVFAKLK-TLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVLIEKALRFSQNLEH 241 (487)
T ss_dssp GGTTTCCEEECTTSCCCEE-EC-CCCCTTCC-EEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCEECTTCCCCTTCCE
T ss_pred hhCCcccEEecCCCccccc-cc-cccCCCCC-EEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcccchhhccCCCCCE
Confidence 799999999999999955 43 44689999 99999999997544 599999999999999999987777777778888
Q ss_pred cccCCCCCCCC
Q 007935 214 TAFSGNPGLCG 224 (584)
Q Consensus 214 ~~~~~n~~l~~ 224 (584)
+.+.+|+..|+
T Consensus 242 L~l~~N~l~c~ 252 (487)
T 3oja_A 242 FDLRGNGFHCG 252 (487)
T ss_dssp EECTTCCBCHH
T ss_pred EEcCCCCCcCc
Confidence 89999987765
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.80 E-value=4.1e-19 Score=168.90 Aligned_cols=163 Identities=22% Similarity=0.222 Sum_probs=141.6
Q ss_pred cceeeEecCCCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCC
Q 007935 56 HWSGIHCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKT 135 (584)
Q Consensus 56 ~w~gv~c~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 135 (584)
.|..-.|.. +.+++++++++ .+|..+. ++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..|..
T Consensus 13 ~~~~~~Cs~---~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~ 86 (229)
T 3e6j_A 13 CPSQCSCSG---TTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDS 86 (229)
T ss_dssp CCTTCEEET---TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred CCCCCEEeC---CEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhccc
Confidence 355667864 56999999998 5666554 89999999999999988999999999999999999998666677899
Q ss_pred CCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCC-CCCccccCCc
Q 007935 136 LKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ-VGSLLNQGPT 214 (584)
Q Consensus 136 l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~~~~~~~ 214 (584)
+++|+.|+|++|+|++..+..|..+++|+ .|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+. +..+.++..+
T Consensus 87 l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~-~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 164 (229)
T 3e6j_A 87 LTQLTVLDLGTNQLTVLPSAVFDRLVHLK-ELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHA 164 (229)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCC-EEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCcCEEECCCCcCCccChhHhCcchhhC-eEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEE
Confidence 99999999999999977777789999999 9999999999 8899999999999999999999987764 4556778888
Q ss_pred ccCCCCCCCCCC
Q 007935 215 AFSGNPGLCGFP 226 (584)
Q Consensus 215 ~~~~n~~l~~~~ 226 (584)
.+.+|+..|.++
T Consensus 165 ~l~~N~~~c~c~ 176 (229)
T 3e6j_A 165 YLFGNPWDCECR 176 (229)
T ss_dssp ECTTSCBCTTBG
T ss_pred EeeCCCccCCcc
Confidence 899999877653
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.8e-19 Score=177.61 Aligned_cols=155 Identities=23% Similarity=0.190 Sum_probs=109.0
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCC-CCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeee
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNN-FSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLD 143 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~-l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 143 (584)
.+++.|+|++|++++..|..|..+++|++|+|++|. +....|..+..+++|++|+|++|++++..|..|.++++|++|+
T Consensus 56 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 135 (285)
T 1ozn_A 56 RNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLY 135 (285)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEE
Confidence 467777777777777777777777777777777776 6655566777777777777777777766677777777777777
Q ss_pred cccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCC-CCCCccccCCcccCCCC
Q 007935 144 LSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIP-QVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 144 ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~~~~~~~~~~~n~ 220 (584)
|++|++++..+..+..+++|+ .|+|++|++++..+..|..+++|+.|+|++|.+++..| .+..+.++..+.+++|.
T Consensus 136 l~~n~l~~~~~~~~~~l~~L~-~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 212 (285)
T 1ozn_A 136 LQDNALQALPDDTFRDLGNLT-HLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANN 212 (285)
T ss_dssp CCSSCCCCCCTTTTTTCTTCC-EEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCCcccccCHhHhccCCCcc-EEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCc
Confidence 777777755555677777777 77777777776555567777777777777777777654 23344455555566654
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=4.3e-19 Score=174.92 Aligned_cols=155 Identities=21% Similarity=0.191 Sum_probs=141.5
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCc-ccCCCCcccCCCCCCCeee
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNS-FCGPIPDRIKTLKNLTHLD 143 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~p~~~~~l~~L~~L~ 143 (584)
..++.|+|++|++++..+..|..+++|++|+|++|.+++..|..|..+++|++|+|++|+ ++...|..|..+++|++|+
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~ 111 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEE
Confidence 479999999999998888899999999999999999998889999999999999999998 8766688999999999999
Q ss_pred cccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCC-CCCccccCCcccCCCC
Q 007935 144 LSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ-VGSLLNQGPTAFSGNP 220 (584)
Q Consensus 144 ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~~~~~~~~~~~n~ 220 (584)
|++|.+++..|..+.++++|+ .|+|++|++++..+..|+.+++|+.|+|++|.+++..+. +..+.++..+.+++|.
T Consensus 112 l~~n~l~~~~~~~~~~l~~L~-~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 188 (285)
T 1ozn_A 112 LDRCGLQELGPGLFRGLAALQ-YLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNR 188 (285)
T ss_dssp CTTSCCCCCCTTTTTTCTTCC-EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCCcCCEECHhHhhCCcCCC-EEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCc
Confidence 999999988899999999999 999999999987788899999999999999999987764 5567777778888875
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.79 E-value=2.4e-19 Score=180.25 Aligned_cols=153 Identities=22% Similarity=0.331 Sum_probs=127.9
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCC---------
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKT--------- 135 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~--------- 135 (584)
.+++.|+|++|+++ .+|..++.+++|++|+|++|.|+ .+|..+..+++|++|+|++|++.+.+|..+..
T Consensus 104 ~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~ 181 (328)
T 4fcg_A 104 SHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQG 181 (328)
T ss_dssp TTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEE
T ss_pred CCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhcc
Confidence 46889999999998 88888999999999999999998 68888999999999999998888888887654
Q ss_pred CCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCC-CCCccccCCc
Q 007935 136 LKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ-VGSLLNQGPT 214 (584)
Q Consensus 136 l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~~~~~~~ 214 (584)
+++|++|+|++|+++ .+|..+.++++|+ .|+|++|++++ +|..++.+++|+.|+|++|++.+.+|. +..+.++..+
T Consensus 182 l~~L~~L~L~~n~l~-~lp~~l~~l~~L~-~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L 258 (328)
T 4fcg_A 182 LVNLQSLRLEWTGIR-SLPASIANLQNLK-SLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRL 258 (328)
T ss_dssp STTCCEEEEEEECCC-CCCGGGGGCTTCC-EEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEE
T ss_pred CCCCCEEECcCCCcC-cchHhhcCCCCCC-EEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEE
Confidence 888999999999888 8888888888888 89999998884 666788888899999998888888874 4556667777
Q ss_pred ccCCCCCC
Q 007935 215 AFSGNPGL 222 (584)
Q Consensus 215 ~~~~n~~l 222 (584)
.+.+|...
T Consensus 259 ~L~~n~~~ 266 (328)
T 4fcg_A 259 ILKDCSNL 266 (328)
T ss_dssp ECTTCTTC
T ss_pred ECCCCCch
Confidence 77776543
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.78 E-value=1.2e-18 Score=168.27 Aligned_cols=138 Identities=22% Similarity=0.193 Sum_probs=128.3
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|+|++|++++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|
T Consensus 59 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 138 (251)
T 3m19_A 59 TKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRL 138 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred ccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEEC
Confidence 57999999999999988989999999999999999999877778899999999999999999777777899999999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIP 203 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 203 (584)
++|+|++..|..|..+++|+ .|+|++|+|++..+..|..+++|+.|+|++|.+++...
T Consensus 139 s~N~l~~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~ 196 (251)
T 3m19_A 139 NTNQLQSIPAGAFDKLTNLQ-TLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSRC 196 (251)
T ss_dssp CSSCCCCCCTTTTTTCTTCC-EEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTTST
T ss_pred cCCcCCccCHHHcCcCcCCC-EEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCCcc
Confidence 99999977777899999999 99999999998888899999999999999999998754
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.77 E-value=1.2e-18 Score=183.51 Aligned_cols=166 Identities=19% Similarity=0.202 Sum_probs=140.5
Q ss_pred CCCc--ceeeEecC-----------CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEe
Q 007935 53 TPCH--WSGIHCIR-----------NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLD 119 (584)
Q Consensus 53 ~~c~--w~gv~c~~-----------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 119 (584)
|.|. |..|.|.. .+++.|+|++|+|++..+..|..+++|+.|+|++|+|++..|..|.++++|++|+
T Consensus 50 C~C~~~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 129 (452)
T 3zyi_A 50 CSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLE 129 (452)
T ss_dssp SEECSSSCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CEECCCCcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEE
Confidence 4453 57888864 3689999999999999999999999999999999999988889999999999999
Q ss_pred cCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccc-cCccccCccccCCCCCcEEEeecCCC
Q 007935 120 LAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFN-QFSGQIPEMYGHFPVMVSLDLRNNNL 198 (584)
Q Consensus 120 l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N-~l~~~~p~~~~~l~~L~~L~l~~N~l 198 (584)
|++|+|++..+..|..+++|++|+|++|+|+...+..|.++++|+ .|+|++| .+....+..|.++++|+.|+|++|++
T Consensus 130 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~-~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l 208 (452)
T 3zyi_A 130 LFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLM-RLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNI 208 (452)
T ss_dssp CCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCC-EEECCCCTTCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred CCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCccc-EEeCCCCCCccccChhhccCCCCCCEEECCCCcc
Confidence 999999977777899999999999999999966666888899998 9999884 55544455788889999999999988
Q ss_pred ccCCCCCCCccccCCcccCCCC
Q 007935 199 SGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 199 ~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
++. |.+..+.++..+.+++|.
T Consensus 209 ~~~-~~~~~l~~L~~L~Ls~N~ 229 (452)
T 3zyi_A 209 KDM-PNLTPLVGLEELEMSGNH 229 (452)
T ss_dssp SSC-CCCTTCTTCCEEECTTSC
T ss_pred ccc-ccccccccccEEECcCCc
Confidence 864 666667777777777775
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.77 E-value=2e-18 Score=168.77 Aligned_cols=140 Identities=26% Similarity=0.298 Sum_probs=130.4
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|+|++|++++..+..|+.+++|++|+|++|++++..|..|..+++|++|+|++|++++..+..|..+++|+.|+|
T Consensus 85 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 164 (272)
T 3rfs_A 85 TNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDL 164 (272)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEEC
Confidence 57999999999999888888999999999999999999877777899999999999999999877778899999999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQV 205 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~ 205 (584)
++|++++..|..+..+++|+ .|+|++|++++..|..|..+++|+.|+|++|.+++..|.+
T Consensus 165 ~~n~l~~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~l 224 (272)
T 3rfs_A 165 SYNQLQSLPEGVFDKLTQLK-DLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPGI 224 (272)
T ss_dssp CSSCCCCCCTTTTTTCTTCC-EEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred CCCCcCccCHHHhcCCccCC-EEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCcHH
Confidence 99999987777889999999 9999999999988888999999999999999999988853
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.77 E-value=4.4e-19 Score=180.53 Aligned_cols=166 Identities=25% Similarity=0.296 Sum_probs=141.4
Q ss_pred CCCCcceeeEecC-------------CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEE
Q 007935 52 STPCHWSGIHCIR-------------NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYL 118 (584)
Q Consensus 52 ~~~c~w~gv~c~~-------------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L 118 (584)
.++|.|.|+ |+. .+++.|+|++|++++..+..|..+++|++|+|++|++++..|..|.++++|++|
T Consensus 27 ~~~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (353)
T 2z80_A 27 SLSCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHL 105 (353)
T ss_dssp CCEECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEE
Confidence 577899887 642 379999999999998877799999999999999999998778889999999999
Q ss_pred ecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchH--HhhccccCccEEEeccc-cCccccCccccCCCCCcEEEeec
Q 007935 119 DLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPE--FLLDLRALTGTLNLSFN-QFSGQIPEMYGHFPVMVSLDLRN 195 (584)
Q Consensus 119 ~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~--~~~~l~~L~~~l~l~~N-~l~~~~p~~~~~l~~L~~L~l~~ 195 (584)
+|++|++++..+..|.++++|++|+|++|+++ .+|. .+.++++|+ .|++++| .+++..|..|.++++|+.|++++
T Consensus 106 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~-~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~ 183 (353)
T 2z80_A 106 DLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQ-ILRVGNMDTFTKIQRKDFAGLTFLEELEIDA 183 (353)
T ss_dssp ECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCC-EEEEEESSSCCEECTTTTTTCCEEEEEEEEE
T ss_pred ECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCc-EEECCCCccccccCHHHccCCCCCCEEECCC
Confidence 99999999655555899999999999999999 5665 788999999 9999999 57777788999999999999999
Q ss_pred CCCccCCC-CCCCccccCCcccCCCC
Q 007935 196 NNLSGEIP-QVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 196 N~l~~~~p-~~~~~~~~~~~~~~~n~ 220 (584)
|.+++..| .+..+.++..+.+.+|.
T Consensus 184 n~l~~~~~~~l~~l~~L~~L~l~~n~ 209 (353)
T 2z80_A 184 SDLQSYEPKSLKSIQNVSHLILHMKQ 209 (353)
T ss_dssp TTCCEECTTTTTTCSEEEEEEEECSC
T ss_pred CCcCccCHHHHhccccCCeecCCCCc
Confidence 99999866 34445555566666664
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=7.1e-19 Score=193.27 Aligned_cols=138 Identities=18% Similarity=0.146 Sum_probs=127.7
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
..++.|+|++|+|++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 36899999999999888899999999999999999999877778999999999999999999777778999999999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCcc-ccCccccCCCCCcEEEeecCCCccCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSG-QIPEMYGHFPVMVSLDLRNNNLSGEIP 203 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p 203 (584)
++|+|++..+..|.++++|+ .|+|++|++++ .+|..++.+++|+.|+|++|+|++..|
T Consensus 132 s~N~l~~l~~~~~~~L~~L~-~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 190 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLK-ELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC 190 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCC-EEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECG
T ss_pred CCCcCCCCChhhhhcCcccC-eeccccCccccCCCchhhccchhhhhhcccCcccccccc
Confidence 99999976667899999999 99999999975 468899999999999999999998776
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.77 E-value=4.2e-19 Score=176.91 Aligned_cols=167 Identities=25% Similarity=0.333 Sum_probs=118.7
Q ss_pred CCCCcceeeEecC-----------CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCC--CCcccccCCCCCCEE
Q 007935 52 STPCHWSGIHCIR-----------NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSK--PIPANLFNATNLVYL 118 (584)
Q Consensus 52 ~~~c~w~gv~c~~-----------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~--~~p~~~~~l~~L~~L 118 (584)
.|.|.|.+|.|.. .+++.|+|++|+++...+..|..+++|++|+|++|.++. .+|..+..+++|++|
T Consensus 4 ~C~C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L 83 (306)
T 2z66_A 4 RCSCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYL 83 (306)
T ss_dssp TCEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEE
T ss_pred CCeeCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEE
Confidence 5779999999974 369999999999996555668999999999999999973 235666677777777
Q ss_pred ecCCCcccCCCCcccCCCCCCCeeecccCCCCCCch-HHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCC
Q 007935 119 DLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLP-EFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNN 197 (584)
Q Consensus 119 ~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p-~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 197 (584)
+|++|+++ .+|..+..+++|++|+|++|++++..+ ..+..+++|+ .|++++|++++..|..|..+++|+.|+|++|.
T Consensus 84 ~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~-~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 161 (306)
T 2z66_A 84 DLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLI-YLDISHTHTRVAFNGIFNGLSSLEVLKMAGNS 161 (306)
T ss_dssp ECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCC-EEECTTSCCEECSTTTTTTCTTCCEEECTTCE
T ss_pred ECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCC-EEECCCCcCCccchhhcccCcCCCEEECCCCc
Confidence 77777776 456667777777777777777764433 4566677776 77777777776666667777777777777777
Q ss_pred Ccc-CCC-CCCCccccCCcccCCCC
Q 007935 198 LSG-EIP-QVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 198 l~~-~~p-~~~~~~~~~~~~~~~n~ 220 (584)
+++ .+| .+..+.++..+.+++|.
T Consensus 162 l~~~~~~~~~~~l~~L~~L~Ls~n~ 186 (306)
T 2z66_A 162 FQENFLPDIFTELRNLTFLDLSQCQ 186 (306)
T ss_dssp EGGGEECSCCTTCTTCCEEECTTSC
T ss_pred cccccchhHHhhCcCCCEEECCCCC
Confidence 665 233 33444555555555553
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=4.4e-19 Score=191.71 Aligned_cols=165 Identities=19% Similarity=0.224 Sum_probs=141.2
Q ss_pred CCCcceeeEecC-------------CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEe
Q 007935 53 TPCHWSGIHCIR-------------NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLD 119 (584)
Q Consensus 53 ~~c~w~gv~c~~-------------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 119 (584)
..|.|.|+ |+. .+++.|+|++|++++..|..|..+++|++|+|++|++++..|..|..+++|++|+
T Consensus 2 ~~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 80 (549)
T 2z81_A 2 LSCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLD 80 (549)
T ss_dssp CEECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred ccCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEE
Confidence 45889888 753 3799999999999999999999999999999999999998888999999999999
Q ss_pred cCCCcccCCCCcccCCCCCCCeeecccCCCCC-CchHHhhccccCccEEEeccccCccccC-ccccCCCCCcEEEeecCC
Q 007935 120 LAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNG-SLPEFLLDLRALTGTLNLSFNQFSGQIP-EMYGHFPVMVSLDLRNNN 197 (584)
Q Consensus 120 l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~-~~p~~~~~l~~L~~~l~l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~ 197 (584)
|++|++++..|..|+++++|++|+|++|.+++ .+|..+.++++|+ .|++++|++.+.+| ..|.++++|+.|++++|.
T Consensus 81 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~-~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~ 159 (549)
T 2z81_A 81 LSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQ-TLRIGNVETFSEIRRIDFAGLTSLNELEIKALS 159 (549)
T ss_dssp CTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCC-EEEEEESSSCCEECTTTTTTCCEEEEEEEEETT
T ss_pred CCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCcc-EEECCCCccccccCHhhhhcccccCeeeccCCc
Confidence 99999998877789999999999999999986 4678899999999 99999999555554 689999999999999999
Q ss_pred CccCCCC-CCCccccCCcccCCC
Q 007935 198 LSGEIPQ-VGSLLNQGPTAFSGN 219 (584)
Q Consensus 198 l~~~~p~-~~~~~~~~~~~~~~n 219 (584)
+++.+|. +..+.++..+.+.+|
T Consensus 160 l~~~~~~~l~~l~~L~~L~l~~n 182 (549)
T 2z81_A 160 LRNYQSQSLKSIRDIHHLTLHLS 182 (549)
T ss_dssp CCEECTTTTTTCSEEEEEEEECS
T ss_pred ccccChhhhhccccCceEecccC
Confidence 9997763 333444444444444
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=8.4e-19 Score=171.96 Aligned_cols=138 Identities=18% Similarity=0.136 Sum_probs=122.1
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
..++.|+|++|++++..+..|..+++|++|+|++|.+++..+..|..+++|++|+|++|++++..+..|.++++|++|+|
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 35899999999999888888999999999999999998776778899999999999999999887788999999999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccc-cCccccCCCCCcEEEeecCCCccCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQ-IPEMYGHFPVMVSLDLRNNNLSGEIP 203 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p 203 (584)
++|.+++..+..+..+++|+ .|++++|++++. +|..|.++++|+.|+|++|.+++..+
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~-~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~ 166 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLK-ELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC 166 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCC-EEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECG
T ss_pred CCCCccccCchhcccCCCCC-EEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCH
Confidence 99999876666788999999 999999999863 68899999999999999999988765
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=2.1e-18 Score=169.08 Aligned_cols=155 Identities=22% Similarity=0.209 Sum_probs=116.5
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|+|++|++++..+..|..+++|++|+|++|.+++..|..|..+++|++|++++|++++..+..+..+++|++|+|
T Consensus 52 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 131 (276)
T 2z62_A 52 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 131 (276)
T ss_dssp TTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEEC
T ss_pred cCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEEC
Confidence 46888888888888777778888888888888888888777777888888888888888888766667888888888888
Q ss_pred ccCCCCC-CchHHhhccccCccEEEeccccCccccCccccCCCCCc----EEEeecCCCccCCCCCCCccccCCcccCCC
Q 007935 145 SSNLLNG-SLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMV----SLDLRNNNLSGEIPQVGSLLNQGPTAFSGN 219 (584)
Q Consensus 145 s~N~l~~-~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~----~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n 219 (584)
++|.+++ .+|..+.++++|+ .|+|++|++++..+..|..+++|+ .|++++|.+++..+......++..+.+++|
T Consensus 132 ~~n~l~~~~l~~~~~~l~~L~-~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n 210 (276)
T 2z62_A 132 AHNLIQSFKLPEYFSNLTNLE-HLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTN 210 (276)
T ss_dssp CSSCCCCCCCCGGGGGCTTCC-EEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEECCSS
T ss_pred cCCccceecCchhhccCCCCC-EEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCCCcccEEECCCC
Confidence 8888875 3688888888888 888888888876666666655555 566666666665554333334444444444
Q ss_pred C
Q 007935 220 P 220 (584)
Q Consensus 220 ~ 220 (584)
.
T Consensus 211 ~ 211 (276)
T 2z62_A 211 Q 211 (276)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.76 E-value=7e-18 Score=157.96 Aligned_cols=159 Identities=22% Similarity=0.215 Sum_probs=135.9
Q ss_pred eEecCCCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCC
Q 007935 60 IHCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNL 139 (584)
Q Consensus 60 v~c~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L 139 (584)
..|.. +.+++++++++. +|..+ .++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|
T Consensus 5 C~C~~---~~v~c~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 78 (208)
T 2o6s_A 5 CSCSG---TTVECYSQGRTS-VPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSL 78 (208)
T ss_dssp CEEET---TEEECCSSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTC
T ss_pred CEECC---CEEEecCCCccC-CCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCc
Confidence 45643 578899999984 45444 4689999999999997666678899999999999999997766778999999
Q ss_pred CeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCC-CCCccccCCcccCC
Q 007935 140 THLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ-VGSLLNQGPTAFSG 218 (584)
Q Consensus 140 ~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~~~~~~~~~~~ 218 (584)
++|+|++|++++..+..+.++++|+ .|+|++|+|++..+..|..+++|+.|+|++|.+++.++. +..+.++..+.+.+
T Consensus 79 ~~L~Ls~n~l~~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 157 (208)
T 2o6s_A 79 TYLNLSTNQLQSLPNGVFDKLTQLK-ELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHD 157 (208)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCC-EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCS
T ss_pred CEEECCCCcCCccCHhHhcCccCCC-EEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecC
Confidence 9999999999976667789999999 999999999988888899999999999999999987775 45677888889999
Q ss_pred CCCCCCC
Q 007935 219 NPGLCGF 225 (584)
Q Consensus 219 n~~l~~~ 225 (584)
|+..|..
T Consensus 158 N~~~~~~ 164 (208)
T 2o6s_A 158 NPWDCTC 164 (208)
T ss_dssp CCBCCCT
T ss_pred CCeecCC
Confidence 9876654
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=1.4e-18 Score=190.06 Aligned_cols=139 Identities=17% Similarity=0.165 Sum_probs=131.0
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 47999999999999998999999999999999999999888889999999999999999999888999999999999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCcc-ccCccccCCCCCcEEEeecCCCccCCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSG-QIPEMYGHFPVMVSLDLRNNNLSGEIPQ 204 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 204 (584)
++|.+++..|..+.++++|+ .|+|++|++++ .+|..|+++++|+.|+|++|.+++..|.
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~-~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~ 171 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLK-KLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVN 171 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCC-EEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTT
T ss_pred cCCccccccccccCCCCCCC-EEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChh
Confidence 99999977778899999999 99999999986 6799999999999999999999998773
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.3e-18 Score=184.50 Aligned_cols=164 Identities=22% Similarity=0.178 Sum_probs=144.5
Q ss_pred cceeeEecC-----------CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCc
Q 007935 56 HWSGIHCIR-----------NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNS 124 (584)
Q Consensus 56 ~w~gv~c~~-----------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~ 124 (584)
.|..|.|.. ..++.|+|++|++++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|+
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 467888863 368899999999999889999999999999999999999889999999999999999999
Q ss_pred ccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCC
Q 007935 125 FCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ 204 (584)
Q Consensus 125 l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 204 (584)
+++..+..|.++++|++|+|++|++++..|..|.++++|+ .|+|++|++++..|..|.++++|+.|+|++|.+++..+.
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~-~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 170 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLK-SLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTE 170 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCC-EEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHH
T ss_pred CCccCcccccCCCCCCEEECCCCccccCChhHccccccCC-EEECCCCccceeChhhccCCCCCCEEECCCCcCcccChh
Confidence 9976667789999999999999999988899999999999 999999999988899999999999999999999976552
Q ss_pred -CCCccccCCcccCCCC
Q 007935 205 -VGSLLNQGPTAFSGNP 220 (584)
Q Consensus 205 -~~~~~~~~~~~~~~n~ 220 (584)
+..+.++..+.+.+|.
T Consensus 171 ~l~~l~~L~~L~l~~n~ 187 (477)
T 2id5_A 171 ALSHLHGLIVLRLRHLN 187 (477)
T ss_dssp HHTTCTTCCEEEEESCC
T ss_pred HhcccCCCcEEeCCCCc
Confidence 3445556666666664
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.4e-18 Score=158.37 Aligned_cols=139 Identities=24% Similarity=0.291 Sum_probs=118.1
Q ss_pred CCCCcceeeEecCCCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCc
Q 007935 52 STPCHWSGIHCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPD 131 (584)
Q Consensus 52 ~~~c~w~gv~c~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 131 (584)
.|.|+|.++.|.. ++++ .+|..+ .++|++|+|++|++++..+..|..+++|++|+|++|+|++..+.
T Consensus 4 ~C~C~~~~l~~~~----------~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 70 (177)
T 2o6r_A 4 RCSCSGTEIRCNS----------KGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDG 70 (177)
T ss_dssp TCEEETTEEECCS----------SCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTT
T ss_pred CCEeCCCEEEecC----------CCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChh
Confidence 4668888777764 4444 344333 36899999999999976666788999999999999999977777
Q ss_pred ccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCC
Q 007935 132 RIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ 204 (584)
Q Consensus 132 ~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 204 (584)
.|..+++|+.|+|++|+|++..+..+..+++|+ .|+|++|+|++..+..|..+++|+.|+|++|.+++..|.
T Consensus 71 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~-~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 142 (177)
T 2o6r_A 71 VFDKLTKLTILYLHENKLQSLPNGVFDKLTQLK-ELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142 (177)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC-EEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred HccCCCccCEEECCCCCccccCHHHhhCCcccC-EEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCcc
Confidence 789999999999999999977777789999999 999999999977777789999999999999999987763
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=1.7e-18 Score=182.60 Aligned_cols=150 Identities=21% Similarity=0.242 Sum_probs=135.9
Q ss_pred CCccee--eEecC----------CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCC-cccccCCCCCCEEec
Q 007935 54 PCHWSG--IHCIR----------NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPI-PANLFNATNLVYLDL 120 (584)
Q Consensus 54 ~c~w~g--v~c~~----------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~-p~~~~~l~~L~~L~l 120 (584)
.|.|.+ +.|.. .+++.|+|++|++++..|..|+.+++|++|+|++|.+.+.+ |..|..+++|++|+|
T Consensus 7 ~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~L 86 (455)
T 3v47_A 7 ECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKL 86 (455)
T ss_dssp CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEEC
T ss_pred eeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeC
Confidence 455555 88864 35899999999999999999999999999999999998766 567899999999999
Q ss_pred CCCcccCCCCcccCCCCCCCeeecccCCCCCCchHH--hhccccCccEEEeccccCccccCcc-ccCCCCCcEEEeecCC
Q 007935 121 AHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEF--LLDLRALTGTLNLSFNQFSGQIPEM-YGHFPVMVSLDLRNNN 197 (584)
Q Consensus 121 ~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~--~~~l~~L~~~l~l~~N~l~~~~p~~-~~~l~~L~~L~l~~N~ 197 (584)
++|++++..|..|.++++|++|+|++|++++.+|.. +.++++|+ .|+|++|++++..|.. +.++++|++|+|++|.
T Consensus 87 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~-~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~ 165 (455)
T 3v47_A 87 DYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLE-MLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNK 165 (455)
T ss_dssp TTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCC-EEECCSSBCCSCCCCGGGGGCTTCCEEECTTCC
T ss_pred CCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCC-EEECCCCccCccCcccccCCCCcccEEeCCCCc
Confidence 999999888999999999999999999999877776 99999999 9999999999888876 8999999999999999
Q ss_pred CccCCCC
Q 007935 198 LSGEIPQ 204 (584)
Q Consensus 198 l~~~~p~ 204 (584)
+++..|.
T Consensus 166 l~~~~~~ 172 (455)
T 3v47_A 166 VKSICEE 172 (455)
T ss_dssp BSCCCTT
T ss_pred ccccChh
Confidence 9998874
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.7e-18 Score=172.40 Aligned_cols=154 Identities=23% Similarity=0.292 Sum_probs=78.6
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCc-ccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeee
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIP-ANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLD 143 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 143 (584)
.+++.|+|++|+++ .+|..+..+++|++|+|++|++++..+ ..+..+++|++|+|++|++++..|..|..+++|+.|+
T Consensus 78 ~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 156 (306)
T 2z66_A 78 TSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLK 156 (306)
T ss_dssp SCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEE
T ss_pred cccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEE
Confidence 34556666666555 234445555555555555555554322 3455555555555555555555555555555555555
Q ss_pred cccCCCCC-CchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCC-CCCCccccCCcccCCCC
Q 007935 144 LSSNLLNG-SLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIP-QVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 144 ls~N~l~~-~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~~~~~~~~~~~n~ 220 (584)
|++|.+++ .+|..+..+++|+ .|+|++|++++..|..|..+++|+.|+|++|.+++..+ .+..+.++..+.+++|.
T Consensus 157 l~~n~l~~~~~~~~~~~l~~L~-~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 234 (306)
T 2z66_A 157 MAGNSFQENFLPDIFTELRNLT-FLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNH 234 (306)
T ss_dssp CTTCEEGGGEECSCCTTCTTCC-EEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSC
T ss_pred CCCCccccccchhHHhhCcCCC-EEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCC
Confidence 55555543 3445555555555 55555555554445555555555555555555554433 12233334444444443
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1.5e-18 Score=182.86 Aligned_cols=161 Identities=21% Similarity=0.241 Sum_probs=141.0
Q ss_pred CCEEEEEcCCCCCcccCCccccC---------------------------------------CCCCCEEEccCCCCCCCC
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGL---------------------------------------LNSLTRLSLASNNFSKPI 105 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~---------------------------------------l~~L~~L~l~~n~l~~~~ 105 (584)
.+++.|+|++|++++..|..+.. .++|+.|+|++|.+++..
T Consensus 212 ~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 291 (455)
T 3v47_A 212 TSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALL 291 (455)
T ss_dssp CEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEEC
T ss_pred ceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccc
Confidence 35888888888887665544322 268999999999999988
Q ss_pred cccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCC
Q 007935 106 PANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHF 185 (584)
Q Consensus 106 p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l 185 (584)
|..+..+++|++|+|++|++++..|..|.++++|+.|+|++|++++..|..+.++++|+ .|+|++|++++..|..|.++
T Consensus 292 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~~~~~~~l 370 (455)
T 3v47_A 292 KSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLE-VLDLSYNHIRALGDQSFLGL 370 (455)
T ss_dssp TTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCC-EEECCSSCCCEECTTTTTTC
T ss_pred hhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCC-EEECCCCcccccChhhcccc
Confidence 99999999999999999999988899999999999999999999988889999999999 99999999998889999999
Q ss_pred CCCcEEEeecCCCccCCCC-CCCccccCCcccCCCCCCCCCC
Q 007935 186 PVMVSLDLRNNNLSGEIPQ-VGSLLNQGPTAFSGNPGLCGFP 226 (584)
Q Consensus 186 ~~L~~L~l~~N~l~~~~p~-~~~~~~~~~~~~~~n~~l~~~~ 226 (584)
++|++|+|++|+|++.++. +..+.++..+.+.+|+..|..+
T Consensus 371 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 371 PNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp TTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred ccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 9999999999999987764 3567778888999999877765
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1.5e-18 Score=189.88 Aligned_cols=162 Identities=21% Similarity=0.181 Sum_probs=132.2
Q ss_pred CCEEEEEcCCCCCcccCC-ccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccC-CCCcccCCCCCCCee
Q 007935 65 NRVTSLYLPNRNLTGYMP-SELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG-PIPDRIKTLKNLTHL 142 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L 142 (584)
.+++.|+|++|++.+..| ..+..+++|++|++++|.+++..|..+..+++|++|+|++|++++ .+|..|..+++|+.|
T Consensus 399 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 478 (606)
T 3vq2_A 399 EELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFL 478 (606)
T ss_dssp TTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEE
T ss_pred CCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEE
Confidence 456777777777777766 677888888888888888888788888888888888888888887 478888888999999
Q ss_pred ecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCcc-ccCCcccCCCCC
Q 007935 143 DLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLL-NQGPTAFSGNPG 221 (584)
Q Consensus 143 ~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~-~~~~~~~~~n~~ 221 (584)
+|++|++++..|..+.++++|+ .|+|++|++++.+|..|.++++|+.|+|++|+|+..++.+..+. ++..+.+.+|+.
T Consensus 479 ~Ls~n~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~ 557 (606)
T 3vq2_A 479 DLSKCQLEQISWGVFDTLHRLQ-LLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSV 557 (606)
T ss_dssp ECTTSCCCEECTTTTTTCTTCC-EEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCC
T ss_pred ECCCCcCCccChhhhcccccCC-EEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCc
Confidence 9999999888888888899998 89999999988888889999999999999999886555444444 467778889998
Q ss_pred CCCCCC
Q 007935 222 LCGFPL 227 (584)
Q Consensus 222 l~~~~~ 227 (584)
.|.++.
T Consensus 558 ~c~c~~ 563 (606)
T 3vq2_A 558 ACICEH 563 (606)
T ss_dssp CCSSTT
T ss_pred ccCCcc
Confidence 887654
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.75 E-value=5.8e-19 Score=195.76 Aligned_cols=178 Identities=21% Similarity=0.184 Sum_probs=118.4
Q ss_pred chHHHHHHHHHHHhcccCCCCCCCCCCCCCCCCCcceeeEecCCCEEEEEcCCCCC------------------cc----
Q 007935 22 LNQDGLALLALKAAIAQDPTRALDSWSESDSTPCHWSGIHCIRNRVTSLYLPNRNL------------------TG---- 79 (584)
Q Consensus 22 ~~~~~~~l~~~~~~~~~~~~~~l~~w~~~~~~~c~w~gv~c~~~~v~~l~l~~~~l------------------~~---- 79 (584)
.+.+.++|+++..+........-..|.......+.|.++.+..++++.|+|.+|++ .+
T Consensus 130 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~~~~~~ 209 (727)
T 4b8c_D 130 VDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVSTPLTPKIELFANGKDEANQALLQHKKLSQYSIDEDDDI 209 (727)
T ss_dssp --CCCHHHHHHHHHHHHHHTTC----------------------------------------------------------
T ss_pred cccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecCCccceEEeeCCCCCcchhhHhhcCccCcccccCcccc
Confidence 34567889999888754433444567554445678988888766666666644443 22
Q ss_pred -----cCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCch
Q 007935 80 -----YMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLP 154 (584)
Q Consensus 80 -----~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p 154 (584)
..+..+..++.|+.|+|++|.|. .+|..++.+++|++|+|++|+|+ .+|..|++|++|++|||++|+|+ .+|
T Consensus 210 ~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp 286 (727)
T 4b8c_D 210 ENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLP 286 (727)
T ss_dssp ------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCC
T ss_pred ccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccC
Confidence 23667888899999999999998 68888889999999999999999 88999999999999999999999 889
Q ss_pred HHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCC
Q 007935 155 EFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ 204 (584)
Q Consensus 155 ~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 204 (584)
..|.+|++|+ .|+|++|.|+ .+|..|+++++|+.|+|++|.|++.+|.
T Consensus 287 ~~~~~l~~L~-~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~ 334 (727)
T 4b8c_D 287 AELGSCFQLK-YFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLK 334 (727)
T ss_dssp SSGGGGTTCS-EEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHH
T ss_pred hhhcCCCCCC-EEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChH
Confidence 9999999999 9999999998 7888899999999999999999998873
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=99.75 E-value=9e-19 Score=192.14 Aligned_cols=142 Identities=18% Similarity=0.300 Sum_probs=130.5
Q ss_pred CCcccCCccccCCCCCCEEEccCCCCCCC-----------------Cccccc--CCCCCCEEecCCCcccCCCCcccCCC
Q 007935 76 NLTGYMPSELGLLNSLTRLSLASNNFSKP-----------------IPANLF--NATNLVYLDLAHNSFCGPIPDRIKTL 136 (584)
Q Consensus 76 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-----------------~p~~~~--~l~~L~~L~l~~N~l~~~~p~~~~~l 136 (584)
+++| +|..|+++++|++|+|++|.|+|. +|..++ ++++|++|+|++|++.|.+|..|+++
T Consensus 194 ~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l 272 (636)
T 4eco_A 194 NITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKAL 272 (636)
T ss_dssp EEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTC
T ss_pred CCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcC
Confidence 4445 788999999999999999999986 999999 99999999999999999999999999
Q ss_pred CCCCeeecccCC-CCC-CchHHhhcc------ccCccEEEeccccCccccCc--cccCCCCCcEEEeecCCCccCCCCCC
Q 007935 137 KNLTHLDLSSNL-LNG-SLPEFLLDL------RALTGTLNLSFNQFSGQIPE--MYGHFPVMVSLDLRNNNLSGEIPQVG 206 (584)
Q Consensus 137 ~~L~~L~ls~N~-l~~-~~p~~~~~l------~~L~~~l~l~~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~p~~~ 206 (584)
++|++|+|++|+ ++| .+|..++++ ++|+ .|+|++|+++ .+|. .++++++|+.|+|++|.++|.+|.+.
T Consensus 273 ~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~-~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip~~~ 350 (636)
T 4eco_A 273 PEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQ-IIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLPAFG 350 (636)
T ss_dssp SSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCC-EEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECCCCE
T ss_pred CCCCEEECcCCCCCccccchHHHHhhhccccCCCCC-EEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchhhhC
Confidence 999999999998 998 899999987 9999 9999999999 8998 99999999999999999999999766
Q ss_pred CccccCCcccCCCC
Q 007935 207 SLLNQGPTAFSGNP 220 (584)
Q Consensus 207 ~~~~~~~~~~~~n~ 220 (584)
.+.++..+.+++|.
T Consensus 351 ~l~~L~~L~L~~N~ 364 (636)
T 4eco_A 351 SEIKLASLNLAYNQ 364 (636)
T ss_dssp EEEEESEEECCSSE
T ss_pred CCCCCCEEECCCCc
Confidence 67777777777774
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.75 E-value=2.4e-18 Score=187.50 Aligned_cols=176 Identities=15% Similarity=0.070 Sum_probs=144.9
Q ss_pred CCCCCCCCCCCCCCc---ceeeEecC------------------CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCC
Q 007935 42 RALDSWSESDSTPCH---WSGIHCIR------------------NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNN 100 (584)
Q Consensus 42 ~~l~~w~~~~~~~c~---w~gv~c~~------------------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~ 100 (584)
..+.+|..+..|++. |.++.|.. ..++.|++++|.+....+..|..+++|++|+|++|.
T Consensus 7 ~~l~~~~~~~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~ 86 (597)
T 3oja_B 7 YNVKPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQ 86 (597)
T ss_dssp ----CCCSEECCCCC--CCSEEECSCEECSSCCCCEESCSSGGGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSC
T ss_pred ccccCCCCCCcCcccCcCceeEecCceecccccccccCcccccCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCC
Confidence 346788765444332 66655541 357889999999997777788999999999999999
Q ss_pred CCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCc
Q 007935 101 FSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPE 180 (584)
Q Consensus 101 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~ 180 (584)
|++..|..|..+++|++|+|++|.|++..|..|+++++|++|+|++|.|++..+..|.++++|+ .|+|++|.+++..|.
T Consensus 87 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~-~L~Ls~N~l~~~~~~ 165 (597)
T 3oja_B 87 IEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLT-TLSMSNNNLERIEDD 165 (597)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC-EEECCSSCCCBCCTT
T ss_pred CCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCC-EEEeeCCcCCCCChh
Confidence 9988888999999999999999999998888899999999999999999955555679999999 999999999999999
Q ss_pred cccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCC
Q 007935 181 MYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 181 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
.|+++++|+.|+|++|.+++..+ ..+.++..+.+.+|.
T Consensus 166 ~~~~l~~L~~L~L~~N~l~~~~~--~~l~~L~~L~l~~n~ 203 (597)
T 3oja_B 166 TFQATTSLQNLQLSSNRLTHVDL--SLIPSLFHANVSYNL 203 (597)
T ss_dssp TTTTCTTCCEEECTTSCCSBCCG--GGCTTCSEEECCSSC
T ss_pred hhhcCCcCcEEECcCCCCCCcCh--hhhhhhhhhhcccCc
Confidence 99999999999999999998643 455556556666653
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.74 E-value=7.9e-18 Score=156.11 Aligned_cols=148 Identities=17% Similarity=0.220 Sum_probs=130.6
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|++++|+++ .+| .+..+++|++|++++|.++. +..+..+++|++|+|++|++++..|..|..+++|++|+|
T Consensus 44 ~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L 119 (197)
T 4ezg_A 44 NSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDI 119 (197)
T ss_dssp HTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEEC
T ss_pred CCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEe
Confidence 46899999999999 556 69999999999999997763 458999999999999999999888999999999999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEecccc-CccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQ-FSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~-l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
++|++++..|..+..+++|+ .|+|++|+ ++ .+| .+..+++|+.|++++|.+++. +.+..+.++..+.+.+|+
T Consensus 120 s~n~i~~~~~~~l~~l~~L~-~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~-~~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 120 SHSAHDDSILTKINTLPKVN-SIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDY-RGIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp CSSBCBGGGHHHHTTCSSCC-EEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCC-TTGGGCSSCCEEEECBC-
T ss_pred cCCccCcHhHHHHhhCCCCC-EEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcCh-HHhccCCCCCEEEeeCcc
Confidence 99999988999999999999 99999998 55 566 689999999999999999974 456677777788888886
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.74 E-value=4e-18 Score=175.88 Aligned_cols=174 Identities=16% Similarity=0.081 Sum_probs=138.9
Q ss_pred CCCCCCCCCCCCcceeeEe---cC------------------CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCC
Q 007935 44 LDSWSESDSTPCHWSGIHC---IR------------------NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFS 102 (584)
Q Consensus 44 l~~w~~~~~~~c~w~gv~c---~~------------------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~ 102 (584)
+++|.....|+|.|.+..| .. ..++.|++++|.++...+..|..+++|++|+|++|.++
T Consensus 3 ~~~~~~~~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~ 82 (390)
T 3o6n_A 3 VKPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIE 82 (390)
T ss_dssp ----CCEECBCC------EEEESCEECSSCCCCEESCSSGGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCC
T ss_pred cCCCCCccceehhhhhhccceeeeeeecccccccccccccccCCceEEEecCCchhhCChhHhcccccCcEEECCCCccc
Confidence 5678776666666555444 20 46888999999998766667899999999999999999
Q ss_pred CCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccc
Q 007935 103 KPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMY 182 (584)
Q Consensus 103 ~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~ 182 (584)
+..|..|..+++|++|+|++|++++..|..|.++++|++|+|++|+++...+..|.++++|+ .|+|++|++++..|..|
T Consensus 83 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~-~L~L~~n~l~~~~~~~~ 161 (390)
T 3o6n_A 83 EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLT-TLSMSNNNLERIEDDTF 161 (390)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC-EEECCSSCCCBCCTTTT
T ss_pred ccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCc-EEECCCCccCccChhhc
Confidence 87777999999999999999999988888899999999999999999944444468999999 99999999998888899
Q ss_pred cCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCC
Q 007935 183 GHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 183 ~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
..+++|+.|++++|.+++.. ...+.++..+.+.+|.
T Consensus 162 ~~l~~L~~L~l~~n~l~~~~--~~~l~~L~~L~l~~n~ 197 (390)
T 3o6n_A 162 QATTSLQNLQLSSNRLTHVD--LSLIPSLFHANVSYNL 197 (390)
T ss_dssp SSCTTCCEEECCSSCCSBCC--GGGCTTCSEEECCSSC
T ss_pred cCCCCCCEEECCCCcCCccc--cccccccceeeccccc
Confidence 99999999999999999753 2445555566666653
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.74 E-value=9.8e-18 Score=175.83 Aligned_cols=163 Identities=21% Similarity=0.227 Sum_probs=139.8
Q ss_pred cceeeEecC-----------CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCc
Q 007935 56 HWSGIHCIR-----------NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNS 124 (584)
Q Consensus 56 ~w~gv~c~~-----------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~ 124 (584)
.|..|.|.. ..++.|+|++|++++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+
T Consensus 44 ~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~ 123 (440)
T 3zyj_A 44 QFSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNR 123 (440)
T ss_dssp TSCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCc
Confidence 367888964 468999999999999989999999999999999999998778899999999999999999
Q ss_pred ccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccc-cCccccCccccCCCCCcEEEeecCCCccCCC
Q 007935 125 FCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFN-QFSGQIPEMYGHFPVMVSLDLRNNNLSGEIP 203 (584)
Q Consensus 125 l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N-~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 203 (584)
|++..+..|..+++|+.|+|++|.++...+..|.++++|+ .|+|++| .++...+..|.++++|+.|+|++|+++ .+|
T Consensus 124 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~-~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~ 201 (440)
T 3zyj_A 124 LTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLR-RLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP 201 (440)
T ss_dssp CSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCC-EEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC
T ss_pred CCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccC-EeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc
Confidence 9977677899999999999999999966666888999999 9999985 455444557888999999999999988 456
Q ss_pred CCCCccccCCcccCCCC
Q 007935 204 QVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 204 ~~~~~~~~~~~~~~~n~ 220 (584)
.+..+.++..+.+++|.
T Consensus 202 ~~~~l~~L~~L~Ls~N~ 218 (440)
T 3zyj_A 202 NLTPLIKLDELDLSGNH 218 (440)
T ss_dssp CCTTCSSCCEEECTTSC
T ss_pred ccCCCcccCEEECCCCc
Confidence 67777777777777774
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.73 E-value=3.7e-18 Score=154.02 Aligned_cols=135 Identities=26% Similarity=0.251 Sum_probs=121.3
Q ss_pred CCEEEEEcCCCCCc-ccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeee
Q 007935 65 NRVTSLYLPNRNLT-GYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLD 143 (584)
Q Consensus 65 ~~v~~l~l~~~~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 143 (584)
.+++.|+|++|+++ +.+|..+..+++|++|+|++|.|++. ..+..+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 46999999999998 88899999999999999999999975 7899999999999999999988888888899999999
Q ss_pred cccCCCCCCc-hHHhhccccCccEEEeccccCccccC---ccccCCCCCcEEEeecCCCccCC
Q 007935 144 LSSNLLNGSL-PEFLLDLRALTGTLNLSFNQFSGQIP---EMYGHFPVMVSLDLRNNNLSGEI 202 (584)
Q Consensus 144 ls~N~l~~~~-p~~~~~l~~L~~~l~l~~N~l~~~~p---~~~~~l~~L~~L~l~~N~l~~~~ 202 (584)
|++|++++.. +..+..+++|+ .|++++|++++..+ ..+..+++|+.|++++|.++..+
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~-~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~ 163 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLK-SLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEAP 163 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCC-EEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBCC
T ss_pred ccCCccCcchhHHHHhcCCCCC-EEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhcc
Confidence 9999999532 27899999999 99999999996655 58999999999999999987544
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.73 E-value=1.3e-17 Score=175.50 Aligned_cols=161 Identities=21% Similarity=0.168 Sum_probs=113.3
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcc------------
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDR------------ 132 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~------------ 132 (584)
.+++.|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..
T Consensus 99 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 178 (452)
T 3zyi_A 99 HHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDL 178 (452)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeC
Confidence 45777777777777766677777777777777777777544455666666666666666665322211
Q ss_pred -----------------------------------cCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccc
Q 007935 133 -----------------------------------IKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQ 177 (584)
Q Consensus 133 -----------------------------------~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~ 177 (584)
+..+++|+.|+|++|+|++..|..|.++++|+ .|+|++|++++.
T Consensus 179 ~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~-~L~L~~n~l~~~ 257 (452)
T 3zyi_A 179 GELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMPNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLK-KLWVMNSQVSLI 257 (452)
T ss_dssp CCCTTCCEECTTTTTTCTTCCEEECTTSCCSSCCCCTTCTTCCEEECTTSCCSEECGGGGTTCTTCC-EEECTTSCCCEE
T ss_pred CCCCCccccChhhccCCCCCCEEECCCCcccccccccccccccEEECcCCcCcccCcccccCccCCC-EEEeCCCcCceE
Confidence 23344555666666666666677788888888 888888888877
Q ss_pred cCccccCCCCCcEEEeecCCCccCCCCC-CCccccCCcccCCCCCCCCCC
Q 007935 178 IPEMYGHFPVMVSLDLRNNNLSGEIPQV-GSLLNQGPTAFSGNPGLCGFP 226 (584)
Q Consensus 178 ~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~~~~~~~~~~~n~~l~~~~ 226 (584)
.|..|.++++|+.|+|++|+|++.++.. ..+.++..+.+.+|+..|.+.
T Consensus 258 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 258 ERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTT
T ss_pred CHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCC
Confidence 7888888888888888888888766643 446667778889999888764
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=3e-17 Score=165.32 Aligned_cols=163 Identities=19% Similarity=0.279 Sum_probs=140.8
Q ss_pred CCCCcceeeEecC-----------CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEec
Q 007935 52 STPCHWSGIHCIR-----------NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDL 120 (584)
Q Consensus 52 ~~~c~w~gv~c~~-----------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 120 (584)
.|.|.|+.+.|.. ..++.|+|++|++++..+..|+.+++|++|+|++|++++..|..|..+++|++|+|
T Consensus 28 ~c~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 28 RCQCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp TCEEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCcCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 3557999999963 46889999999999888889999999999999999999888999999999999999
Q ss_pred CCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCc--cccCccccCCCCCcEEEeecCCC
Q 007935 121 AHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFS--GQIPEMYGHFPVMVSLDLRNNNL 198 (584)
Q Consensus 121 ~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~--~~~p~~~~~l~~L~~L~l~~N~l 198 (584)
++|+++ .+|..+. ++|++|+|++|.+++..+..+.++++|+ .|++++|+++ +..+..|.++++|+.|++++|.+
T Consensus 108 s~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~-~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l 183 (330)
T 1xku_A 108 SKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMI-VVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNI 183 (330)
T ss_dssp CSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCC-EEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCC
T ss_pred CCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCcccc-EEECCCCcCCccCcChhhccCCCCcCEEECCCCcc
Confidence 999998 6776665 7999999999999988888899999999 9999999996 47788999999999999999999
Q ss_pred ccCCCCCCCccccCCcccCCCC
Q 007935 199 SGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 199 ~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
+..+... ..++..+.+++|.
T Consensus 184 ~~l~~~~--~~~L~~L~l~~n~ 203 (330)
T 1xku_A 184 TTIPQGL--PPSLTELHLDGNK 203 (330)
T ss_dssp CSCCSSC--CTTCSEEECTTSC
T ss_pred ccCCccc--cccCCEEECCCCc
Confidence 8654322 2456666666664
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=8.3e-18 Score=186.55 Aligned_cols=167 Identities=22% Similarity=0.192 Sum_probs=143.3
Q ss_pred CCCcceeeEecC-----------CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecC
Q 007935 53 TPCHWSGIHCIR-----------NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLA 121 (584)
Q Consensus 53 ~~c~w~gv~c~~-----------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~ 121 (584)
|.|.+..+.|.. .+++.|+|++|++++..+..|+++++|++|+|++|.+++..|..|.++++|++|+|+
T Consensus 2 C~~~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 81 (680)
T 1ziw_A 2 CTVSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQ 81 (680)
T ss_dssp --CBSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECC
T ss_pred ceeECCeeECCCCCccccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECC
Confidence 445555666642 479999999999998888899999999999999999999889999999999999999
Q ss_pred CCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccC
Q 007935 122 HNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGE 201 (584)
Q Consensus 122 ~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 201 (584)
+|++++..+..|.++++|++|+|++|++++..|..|.++++|+ .|+|++|++++..|..++++++|+.|+|++|.+++.
T Consensus 82 ~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~-~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 160 (680)
T 1ziw_A 82 HNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLI-TLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQAL 160 (680)
T ss_dssp SSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCC-EEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCB
T ss_pred CCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCC-EEECCCCcccccCchhhcccccCCEEEccCCccccc
Confidence 9999965556799999999999999999977778999999999 999999999999999999999999999999999987
Q ss_pred CCCC---CCccccCCcccCCCC
Q 007935 202 IPQV---GSLLNQGPTAFSGNP 220 (584)
Q Consensus 202 ~p~~---~~~~~~~~~~~~~n~ 220 (584)
.|.. ....++..+.+++|.
T Consensus 161 ~~~~~~~~~~~~L~~L~L~~n~ 182 (680)
T 1ziw_A 161 KSEELDIFANSSLKKLELSSNQ 182 (680)
T ss_dssp CHHHHGGGTTCEESEEECTTCC
T ss_pred CHHHhhccccccccEEECCCCc
Confidence 7631 122455666666664
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.5e-17 Score=174.43 Aligned_cols=159 Identities=25% Similarity=0.268 Sum_probs=123.6
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCccc-------------------------ccCCCCCCEEe
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPAN-------------------------LFNATNLVYLD 119 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~-------------------------~~~l~~L~~L~ 119 (584)
.+++.|+|++|+|++..+..|..+++|++|+|++|.|+...+.. |.++++|++|+
T Consensus 112 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~ 191 (440)
T 3zyj_A 112 ANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLN 191 (440)
T ss_dssp SSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEE
T ss_pred ccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeec
Confidence 46888888888888766777888888888888888887543433 44455666666
Q ss_pred cCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCc
Q 007935 120 LAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLS 199 (584)
Q Consensus 120 l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 199 (584)
|++|+++ .+| .+..+++|+.|+|++|+|++..|..|.++++|+ .|+|++|++++..+..|.++++|+.|+|++|+|+
T Consensus 192 L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~-~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 268 (440)
T 3zyj_A 192 LAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQ-KLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLT 268 (440)
T ss_dssp CTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCC-EEECTTCCCCEECTTSSTTCTTCCEEECTTSCCC
T ss_pred CCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCC-EEECCCCceeEEChhhhcCCCCCCEEECCCCCCC
Confidence 6666665 344 366777888888888888877788888888888 8999999998888888999999999999999999
Q ss_pred cCCCC-CCCccccCCcccCCCCCCCCCC
Q 007935 200 GEIPQ-VGSLLNQGPTAFSGNPGLCGFP 226 (584)
Q Consensus 200 ~~~p~-~~~~~~~~~~~~~~n~~l~~~~ 226 (584)
+.++. +..+.++..+.+.+|+..|.+.
T Consensus 269 ~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 296 (440)
T 3zyj_A 269 LLPHDLFTPLHHLERIHLHHNPWNCNCD 296 (440)
T ss_dssp CCCTTTTSSCTTCCEEECCSSCEECSST
T ss_pred ccChhHhccccCCCEEEcCCCCccCCCC
Confidence 87764 3456677788899999888764
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.72 E-value=5.8e-18 Score=162.20 Aligned_cols=167 Identities=15% Similarity=0.200 Sum_probs=138.0
Q ss_pred CCCCcc-ee--eEecC--------CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCC-CCCCCcccccCCCCCCEEe
Q 007935 52 STPCHW-SG--IHCIR--------NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNN-FSKPIPANLFNATNLVYLD 119 (584)
Q Consensus 52 ~~~c~w-~g--v~c~~--------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~-l~~~~p~~~~~l~~L~~L~ 119 (584)
.|.|.+ .+ |.|.. ..++.|+|++|++++..+..|..+++|++|+|++|+ +++..+..|.++++|++|+
T Consensus 7 ~C~C~~~~~~~v~c~~l~~ip~~~~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~ 86 (239)
T 2xwt_C 7 PCECHQEEDFRVTCKDIQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIE 86 (239)
T ss_dssp SCSEEECSTTEEEECSCSSCCCCCTTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEE
T ss_pred CCeeCCCCcceeEccCccccCCCCCcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEE
Confidence 455644 44 44853 579999999999998888899999999999999997 8876666899999999999
Q ss_pred cCC-CcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCc--cEEEeccc-cCccccCccccCCCCCc-EEEee
Q 007935 120 LAH-NSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALT--GTLNLSFN-QFSGQIPEMYGHFPVMV-SLDLR 194 (584)
Q Consensus 120 l~~-N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~--~~l~l~~N-~l~~~~p~~~~~l~~L~-~L~l~ 194 (584)
|++ |++++..+..|.++++|+.|+|++|++++ +|. +..+++|+ ..|++++| ++++..+..|.++++|+ .|+++
T Consensus 87 l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~ 164 (239)
T 2xwt_C 87 IRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLY 164 (239)
T ss_dssp EEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECC
T ss_pred CCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcC
Confidence 999 99997777889999999999999999995 776 77777664 28999999 99987788899999999 99999
Q ss_pred cCCCccCCCCCCCccccCCcccCCCC
Q 007935 195 NNNLSGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 195 ~N~l~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
+|.++...+......++..+.+.+|.
T Consensus 165 ~n~l~~i~~~~~~~~~L~~L~L~~n~ 190 (239)
T 2xwt_C 165 NNGFTSVQGYAFNGTKLDAVYLNKNK 190 (239)
T ss_dssp SCCCCEECTTTTTTCEEEEEECTTCT
T ss_pred CCCCcccCHhhcCCCCCCEEEcCCCC
Confidence 99999554433333456666777774
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.72 E-value=3.2e-18 Score=170.89 Aligned_cols=154 Identities=22% Similarity=0.208 Sum_probs=118.4
Q ss_pred CCEEEEEcCCCCCcccCCccc--cCCCCCCEEEccCCCCCCCCcccccCC-----CCCCEEecCCCcccCCCCcccCCCC
Q 007935 65 NRVTSLYLPNRNLTGYMPSEL--GLLNSLTRLSLASNNFSKPIPANLFNA-----TNLVYLDLAHNSFCGPIPDRIKTLK 137 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~--~~l~~L~~L~l~~n~l~~~~p~~~~~l-----~~L~~L~l~~N~l~~~~p~~~~~l~ 137 (584)
.+++.|+|++|++++.+|..+ +.+++|++|+|++|+|++. |..+..+ ++|++|+|++|++++..|..|+.++
T Consensus 95 ~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~ 173 (312)
T 1wwl_A 95 SGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFP 173 (312)
T ss_dssp SCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCS
T ss_pred CCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCC
Confidence 468888888888888888776 8888888888888888875 7777766 8888888888888877778888888
Q ss_pred CCCeeecccCCCCCC--chHHh--hccccCccEEEeccccCcc--cc-CccccCCCCCcEEEeecCCCccCCC--CCCCc
Q 007935 138 NLTHLDLSSNLLNGS--LPEFL--LDLRALTGTLNLSFNQFSG--QI-PEMYGHFPVMVSLDLRNNNLSGEIP--QVGSL 208 (584)
Q Consensus 138 ~L~~L~ls~N~l~~~--~p~~~--~~l~~L~~~l~l~~N~l~~--~~-p~~~~~l~~L~~L~l~~N~l~~~~p--~~~~~ 208 (584)
+|++|+|++|++++. +|..+ ..+++|+ .|+|++|+|++ .+ ...+.++++|+.|+|++|.+++.+| .+..+
T Consensus 174 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l 252 (312)
T 1wwl_A 174 ALSTLDLSDNPELGERGLISALCPLKFPTLQ-VLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWP 252 (312)
T ss_dssp SCCEEECCSCTTCHHHHHHHHSCTTSCTTCC-EEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCC
T ss_pred CCCEEECCCCCcCcchHHHHHHHhccCCCCC-EEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhc
Confidence 888888888888765 34555 7788888 88888888873 22 2445677888888888888888664 33345
Q ss_pred cccCCcccCCCC
Q 007935 209 LNQGPTAFSGNP 220 (584)
Q Consensus 209 ~~~~~~~~~~n~ 220 (584)
.++..+.+++|.
T Consensus 253 ~~L~~L~Ls~N~ 264 (312)
T 1wwl_A 253 SQLNSLNLSFTG 264 (312)
T ss_dssp TTCCEEECTTSC
T ss_pred CCCCEEECCCCc
Confidence 566667777765
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.72 E-value=2.2e-17 Score=152.41 Aligned_cols=128 Identities=24% Similarity=0.320 Sum_probs=114.6
Q ss_pred EEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCC
Q 007935 69 SLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNL 148 (584)
Q Consensus 69 ~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~ 148 (584)
.+++++|+|+ .+|..+. ++|++|+|++|+|+ .+|..|.++++|++|+|++|+|++..+..|.++++|+.|+|++|+
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 4667777777 5566553 58999999999998 688999999999999999999998888899999999999999999
Q ss_pred CCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccC
Q 007935 149 LNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGE 201 (584)
Q Consensus 149 l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 201 (584)
|++..|..|.++++|+ .|+|++|+|++..+..|..+++|+.|+|++|.+...
T Consensus 90 l~~i~~~~f~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLR-LLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp CCBCCTTTTTTCTTCC-EEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred cCEeCHHHhCCCCCCC-EEECCCCCCCeeChhhhhcCccccEEEeCCCCeecC
Confidence 9988888999999999 999999999977777899999999999999998754
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.72 E-value=5.1e-18 Score=149.85 Aligned_cols=128 Identities=26% Similarity=0.275 Sum_probs=109.8
Q ss_pred CCEEEEEcCCCCCc-ccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeee
Q 007935 65 NRVTSLYLPNRNLT-GYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLD 143 (584)
Q Consensus 65 ~~v~~l~l~~~~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 143 (584)
.+++.|++++|+++ +.+|..+..+++|+.|+|++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 46889999999998 78888889999999999999999875 6788899999999999999987888888899999999
Q ss_pred cccCCCCCC-chHHhhccccCccEEEeccccCccccC---ccccCCCCCcEEEeec
Q 007935 144 LSSNLLNGS-LPEFLLDLRALTGTLNLSFNQFSGQIP---EMYGHFPVMVSLDLRN 195 (584)
Q Consensus 144 ls~N~l~~~-~p~~~~~l~~L~~~l~l~~N~l~~~~p---~~~~~l~~L~~L~l~~ 195 (584)
|++|.+++. .|..+..+++|+ .|++++|++++..+ ..+..+++|+.|++++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~-~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLK-SLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCC-EEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCCCcCCChHHHHHHhhCCCCC-EEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 999999853 347888999999 99999999987665 5788899999998764
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.2e-17 Score=179.25 Aligned_cols=158 Identities=23% Similarity=0.267 Sum_probs=139.9
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCC--CCcccccCCCCCCEEecCCCcccCCCCcc-cCCCCCCCe
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSK--PIPANLFNATNLVYLDLAHNSFCGPIPDR-IKTLKNLTH 141 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~l~~L~~ 141 (584)
..++.|+|++|++++.+|..++.+++|+.|+|++|++++ .+|..+..+++|++|+|++|++++.+|.. +..+++|+.
T Consensus 324 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~ 403 (520)
T 2z7x_B 324 SPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLS 403 (520)
T ss_dssp CCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCE
T ss_pred CcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCE
Confidence 578999999999999999999999999999999999997 56788999999999999999999867764 888999999
Q ss_pred eecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCC-CCCccccCCcccCCCC
Q 007935 142 LDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ-VGSLLNQGPTAFSGNP 220 (584)
Q Consensus 142 L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~~~~~~~~~~~n~ 220 (584)
|+|++|++++.+|..+. ++|+ .|+|++|+|+ .+|..+..+++|+.|+|++|+|+..++. +..+.++..+.+.+|+
T Consensus 404 L~Ls~N~l~~~~~~~l~--~~L~-~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~ 479 (520)
T 2z7x_B 404 LNMSSNILTDTIFRCLP--PRIK-VLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNP 479 (520)
T ss_dssp EECCSSCCCGGGGGSCC--TTCC-EEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EECcCCCCCcchhhhhc--ccCC-EEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCC
Confidence 99999999988887664 6888 9999999999 8888888999999999999999965554 5567778888999999
Q ss_pred CCCCCC
Q 007935 221 GLCGFP 226 (584)
Q Consensus 221 ~l~~~~ 226 (584)
..|.++
T Consensus 480 ~~c~c~ 485 (520)
T 2z7x_B 480 WDCSCP 485 (520)
T ss_dssp BCCCHH
T ss_pred CcccCC
Confidence 888654
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.72 E-value=8.2e-18 Score=190.71 Aligned_cols=70 Identities=20% Similarity=0.291 Sum_probs=45.4
Q ss_pred hhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCC--------------------CCccccCCccc
Q 007935 157 LLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQV--------------------GSLLNQGPTAF 216 (584)
Q Consensus 157 ~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--------------------~~~~~~~~~~~ 216 (584)
|.++++|+ .|+|++|+|++.+|..|.++++|+.|+|++|+|++.+|.. ..+.++..+.+
T Consensus 476 ~~~l~~L~-~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l 554 (844)
T 3j0a_A 476 FEGLSHLQ-VLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLPANLEILDISRNQLLAPNPDVFVSLSVLDI 554 (844)
T ss_dssp SSCBCCEE-CCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCCSCCCEEEEEEECCCCCCSCCCSSCCEEEE
T ss_pred hcCccccc-EEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhhccccEEECCCCcCCCCChhHhCCcCEEEe
Confidence 44556666 6777777777666766777777777777777766654422 12334556677
Q ss_pred CCCCCCCCCCC
Q 007935 217 SGNPGLCGFPL 227 (584)
Q Consensus 217 ~~n~~l~~~~~ 227 (584)
.+|+..|.++.
T Consensus 555 ~~Np~~C~c~~ 565 (844)
T 3j0a_A 555 THNKFICECEL 565 (844)
T ss_dssp EEECCCCSSSC
T ss_pred cCCCccccccc
Confidence 88998887653
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.72 E-value=5.2e-18 Score=189.93 Aligned_cols=138 Identities=17% Similarity=0.237 Sum_probs=128.0
Q ss_pred CCccccCCCCCCEEEccCCCCCC-----------------CCccccc--CCCCCCEEecCCCcccCCCCcccCCCCCCCe
Q 007935 81 MPSELGLLNSLTRLSLASNNFSK-----------------PIPANLF--NATNLVYLDLAHNSFCGPIPDRIKTLKNLTH 141 (584)
Q Consensus 81 ~~~~~~~l~~L~~L~l~~n~l~~-----------------~~p~~~~--~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~ 141 (584)
+|..|++|++|+.|+|++|+|+| .+|..++ ++++|++|+|++|++.+.+|..|+++++|+.
T Consensus 440 IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~ 519 (876)
T 4ecn_A 440 ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQS 519 (876)
T ss_dssp ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCE
T ss_pred hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCE
Confidence 78899999999999999999998 3999988 9999999999999999999999999999999
Q ss_pred eecccCC-CCC-CchHHhhccc-------cCccEEEeccccCccccCc--cccCCCCCcEEEeecCCCccCCCCCCCccc
Q 007935 142 LDLSSNL-LNG-SLPEFLLDLR-------ALTGTLNLSFNQFSGQIPE--MYGHFPVMVSLDLRNNNLSGEIPQVGSLLN 210 (584)
Q Consensus 142 L~ls~N~-l~~-~~p~~~~~l~-------~L~~~l~l~~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~ 210 (584)
|+|++|+ |+| .+|..+.+++ +|+ .|+|++|+|+ .+|. .|+++++|+.|+|++|.++ .+|.+..+.+
T Consensus 520 L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~-~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp~~~~L~~ 596 (876)
T 4ecn_A 520 LNIACNRGISAAQLKADWTRLADDEDTGPKIQ-IFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLEAFGTNVK 596 (876)
T ss_dssp EECTTCTTSCHHHHHHHHHHHHHCTTTTTTCC-EEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCCCCCTTSE
T ss_pred EECcCCCCcccccchHHHHhhhhcccccCCcc-EEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cchhhcCCCc
Confidence 9999998 998 8999999887 999 9999999999 8898 9999999999999999999 7887777888
Q ss_pred cCCcccCCCCC
Q 007935 211 QGPTAFSGNPG 221 (584)
Q Consensus 211 ~~~~~~~~n~~ 221 (584)
+..+.+++|..
T Consensus 597 L~~L~Ls~N~l 607 (876)
T 4ecn_A 597 LTDLKLDYNQI 607 (876)
T ss_dssp ESEEECCSSCC
T ss_pred ceEEECcCCcc
Confidence 88888888863
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.7e-17 Score=179.73 Aligned_cols=158 Identities=24% Similarity=0.266 Sum_probs=139.4
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCC--CCcccccCCCCCCEEecCCCcccCCCCc-ccCCCCCCCe
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSK--PIPANLFNATNLVYLDLAHNSFCGPIPD-RIKTLKNLTH 141 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~l~~L~~ 141 (584)
.+++.|+|++|++++.+|..++.+++|+.|+|++|++++ .+|..+..+++|++|+|++|++++.+|. .+..+++|+.
T Consensus 353 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~ 432 (562)
T 3a79_B 353 SSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILV 432 (562)
T ss_dssp CCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCE
T ss_pred CCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCE
Confidence 579999999999999999999999999999999999997 3457789999999999999999986665 5889999999
Q ss_pred eecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCC-CCCccccCCcccCCCC
Q 007935 142 LDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ-VGSLLNQGPTAFSGNP 220 (584)
Q Consensus 142 L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~~~~~~~~~~~n~ 220 (584)
|+|++|++++.+|..+. ++|+ .|+|++|+|+ .+|..+.++++|+.|+|++|+|++.++. +..+.++..+.+.+|+
T Consensus 433 L~l~~n~l~~~~~~~l~--~~L~-~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~ 508 (562)
T 3a79_B 433 LNLSSNMLTGSVFRCLP--PKVK-VLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNP 508 (562)
T ss_dssp EECCSSCCCGGGGSSCC--TTCS-EEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCC
T ss_pred EECCCCCCCcchhhhhc--CcCC-EEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCC
Confidence 99999999988776554 6888 9999999999 7888777999999999999999976554 6677778888999999
Q ss_pred CCCCCC
Q 007935 221 GLCGFP 226 (584)
Q Consensus 221 ~l~~~~ 226 (584)
..|.++
T Consensus 509 ~~c~c~ 514 (562)
T 3a79_B 509 WDCTCP 514 (562)
T ss_dssp BCCCHH
T ss_pred cCCCcc
Confidence 888754
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=9.9e-18 Score=183.34 Aligned_cols=155 Identities=19% Similarity=0.083 Sum_probs=134.8
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
..++.|+|++|++++..|..|+.+++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 33 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 112 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFF 112 (606)
T ss_dssp TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEEC
T ss_pred CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeec
Confidence 46899999999999998999999999999999999999988999999999999999999999888999999999999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCC-CCCccccC--CcccCCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ-VGSLLNQG--PTAFSGNP 220 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~~~~~--~~~~~~n~ 220 (584)
++|++++..|..+.++++|+ .|+|++|++++..+..+..+++|+.|+|++|.+++..|. +..+.++. .+.+.+|.
T Consensus 113 ~~n~i~~l~~~~~~~l~~L~-~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~ 190 (606)
T 3t6q_A 113 IQTGISSIDFIPLHNQKTLE-SLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGND 190 (606)
T ss_dssp TTSCCSCGGGSCCTTCTTCC-EEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCC
T ss_pred cccCcccCCcchhccCCccc-EEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCc
Confidence 99999976688899999999 999999999975444455599999999999999987662 33344444 45566664
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.71 E-value=4.4e-17 Score=164.18 Aligned_cols=161 Identities=19% Similarity=0.272 Sum_probs=138.3
Q ss_pred CCCcceeeEecC-----------CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecC
Q 007935 53 TPCHWSGIHCIR-----------NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLA 121 (584)
Q Consensus 53 ~~c~w~gv~c~~-----------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~ 121 (584)
|.|.|..+.|.. ..++.|+|++|++++..|..|..+++|++|+|++|.+++..|..|..+++|++|+|+
T Consensus 31 c~c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 31 CHCHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp CEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred CcccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 458899999963 368999999999998888899999999999999999998889999999999999999
Q ss_pred CCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCc--cccCccccCCCCCcEEEeecCCCc
Q 007935 122 HNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFS--GQIPEMYGHFPVMVSLDLRNNNLS 199 (584)
Q Consensus 122 ~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~--~~~p~~~~~l~~L~~L~l~~N~l~ 199 (584)
+|+++ .+|..+. ++|++|+|++|++++..+..+.++++|+ .|++++|+++ +..|..|..+ +|+.|++++|.++
T Consensus 111 ~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~-~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~ 185 (332)
T 2ft3_A 111 KNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMN-CIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLT 185 (332)
T ss_dssp SSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCC-EEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCS
T ss_pred CCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCC-EEECCCCccccCCCCcccccCC-ccCEEECcCCCCC
Confidence 99998 6776665 8999999999999976667799999999 9999999996 4778888888 9999999999999
Q ss_pred cCCCCCCCccccCCcccCCCC
Q 007935 200 GEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 200 ~~~p~~~~~~~~~~~~~~~n~ 220 (584)
+.+... ..++..+.+++|.
T Consensus 186 ~l~~~~--~~~L~~L~l~~n~ 204 (332)
T 2ft3_A 186 GIPKDL--PETLNELHLDHNK 204 (332)
T ss_dssp SCCSSS--CSSCSCCBCCSSC
T ss_pred ccCccc--cCCCCEEECCCCc
Confidence 754422 2456666777764
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.3e-17 Score=189.13 Aligned_cols=165 Identities=24% Similarity=0.250 Sum_probs=141.8
Q ss_pred CcceeeEecCCCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCC-cccccCCCCCCEEecCCCcccCCCCccc
Q 007935 55 CHWSGIHCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPI-PANLFNATNLVYLDLAHNSFCGPIPDRI 133 (584)
Q Consensus 55 c~w~gv~c~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~p~~~ 133 (584)
|.|..|.+...+++.|+|++|++++..|..|.++++|++|+|++|.+.+.+ |..|.++++|++|+|++|++++..|..|
T Consensus 14 ~~L~~vP~lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~ 93 (844)
T 3j0a_A 14 CNLTQVPQVLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAF 93 (844)
T ss_dssp CCSSCCCSSCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSS
T ss_pred CCCCCCCCCCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHc
Confidence 567777765578999999999999999999999999999999999777766 7889999999999999999998889999
Q ss_pred CCCCCCCeeecccCCCCCCchHH--hhccccCccEEEeccccCccccC-ccccCCCCCcEEEeecCCCccCCCCC-CCc-
Q 007935 134 KTLKNLTHLDLSSNLLNGSLPEF--LLDLRALTGTLNLSFNQFSGQIP-EMYGHFPVMVSLDLRNNNLSGEIPQV-GSL- 208 (584)
Q Consensus 134 ~~l~~L~~L~ls~N~l~~~~p~~--~~~l~~L~~~l~l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~- 208 (584)
.++++|++|+|++|.+++.+|.. +.++++|+ .|+|++|++++..+ ..|+++++|++|+|++|.+++..|.. ..+
T Consensus 94 ~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~-~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~ 172 (844)
T 3j0a_A 94 QGLFHLFELRLYFCGLSDAVLKDGYFRNLKALT-RLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQ 172 (844)
T ss_dssp CSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCC-EEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHH
T ss_pred cCCcccCEeeCcCCCCCcccccCccccccCCCC-EEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHccccc
Confidence 99999999999999999877776 89999999 99999999987755 68999999999999999999877632 222
Q ss_pred -cccCCcccCCCC
Q 007935 209 -LNQGPTAFSGNP 220 (584)
Q Consensus 209 -~~~~~~~~~~n~ 220 (584)
.++..+.+.+|.
T Consensus 173 ~~~L~~L~L~~n~ 185 (844)
T 3j0a_A 173 GKTLSFFSLAANS 185 (844)
T ss_dssp HCSSCCCEECCSB
T ss_pred CCccceEECCCCc
Confidence 345555555554
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=1.5e-17 Score=181.82 Aligned_cols=138 Identities=22% Similarity=0.214 Sum_probs=92.2
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCccc-ccCCCCCCEEecCCCcccCCCCcccCCCCCCCeee
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPAN-LFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLD 143 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~-~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 143 (584)
.+++.|+|++|++.+..|..|..+++|+.|+|++|.+++..|.. +..+++|++|+|++|++++..|..|..+++|+.|+
T Consensus 376 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 455 (606)
T 3t6q_A 376 SHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLN 455 (606)
T ss_dssp TTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEE
Confidence 46777777777777777777777777777777777776655443 66677777777777777766666666667777777
Q ss_pred cccCCCCCC---chHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCC
Q 007935 144 LSSNLLNGS---LPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIP 203 (584)
Q Consensus 144 ls~N~l~~~---~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 203 (584)
|++|.+++. .+..+..+++|+ .|+|++|++++..|..|.++++|+.|+|++|++++.+|
T Consensus 456 L~~n~l~~~~~~~~~~~~~l~~L~-~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 517 (606)
T 3t6q_A 456 LQGNHFPKGNIQKTNSLQTLGRLE-ILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSI 517 (606)
T ss_dssp CTTCBCGGGEECSSCGGGGCTTCC-EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGG
T ss_pred CCCCCCCccccccchhhccCCCcc-EEECCCCccCccChhhhccccCCCEEECCCCccCcCCh
Confidence 777666542 224566666666 66666666666666666666666666666666666554
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.70 E-value=1.6e-17 Score=153.25 Aligned_cols=127 Identities=24% Similarity=0.324 Sum_probs=116.8
Q ss_pred CCCCcceeeEecC-----------CCEEEEEcCCCCCcccCCc-cccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEe
Q 007935 52 STPCHWSGIHCIR-----------NRVTSLYLPNRNLTGYMPS-ELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLD 119 (584)
Q Consensus 52 ~~~c~w~gv~c~~-----------~~v~~l~l~~~~l~~~~~~-~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 119 (584)
.|.|.|+.+.|.. .+++.|+|++|++++..+. .|+.+++|++|+|++|+|++..|..|..+++|++|+
T Consensus 5 ~C~C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 84 (192)
T 1w8a_A 5 MCHCEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQ 84 (192)
T ss_dssp TSEEETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEE
T ss_pred CCEECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEE
Confidence 4678999999974 3789999999999987765 599999999999999999998899999999999999
Q ss_pred cCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccC
Q 007935 120 LAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIP 179 (584)
Q Consensus 120 l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p 179 (584)
|++|+|++..|..|.++++|++|+|++|+|++..|..+..+++|+ .|+|++|++++..+
T Consensus 85 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~-~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 85 LGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLT-SLNLASNPFNCNCH 143 (192)
T ss_dssp CCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCC-EEECTTCCBCCSGG
T ss_pred CCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCC-EEEeCCCCccCcCc
Confidence 999999998888899999999999999999998999999999999 99999999997654
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.70 E-value=8.1e-18 Score=168.00 Aligned_cols=152 Identities=20% Similarity=0.128 Sum_probs=124.6
Q ss_pred CCEEEEEcCCCCCcccCCccccCC-----CCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCC--CCccc--CC
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLL-----NSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGP--IPDRI--KT 135 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l-----~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~--~p~~~--~~ 135 (584)
.+++.|+|++|++++. |..++.+ ++|++|+|++|+|++..|..|..+++|++|+|++|++.+. +|..+ ..
T Consensus 121 ~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 199 (312)
T 1wwl_A 121 PDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLK 199 (312)
T ss_dssp CCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTS
T ss_pred CCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhcc
Confidence 5799999999999988 8888877 8999999999999988788999999999999999998765 34444 88
Q ss_pred CCCCCeeecccCCCCC--Cch-HHhhccccCccEEEeccccCccccC-ccccCCCCCcEEEeecCCCccCCCCCCCcccc
Q 007935 136 LKNLTHLDLSSNLLNG--SLP-EFLLDLRALTGTLNLSFNQFSGQIP-EMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQ 211 (584)
Q Consensus 136 l~~L~~L~ls~N~l~~--~~p-~~~~~l~~L~~~l~l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~ 211 (584)
+++|++|+|++|+|++ .++ ..+.++++|+ .|+|++|++++.+| ..+..+++|+.|+|++|.|+ .+|.... .++
T Consensus 200 l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~-~~L 276 (312)
T 1wwl_A 200 FPTLQVLALRNAGMETPSGVCSALAAARVQLQ-GLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP-AKL 276 (312)
T ss_dssp CTTCCEEECTTSCCCCHHHHHHHHHHTTCCCS-EEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC-SEE
T ss_pred CCCCCEEECCCCcCcchHHHHHHHHhcCCCCC-EEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc-CCc
Confidence 9999999999999983 223 3345778999 99999999998775 56677899999999999999 5553222 566
Q ss_pred CCcccCCCC
Q 007935 212 GPTAFSGNP 220 (584)
Q Consensus 212 ~~~~~~~n~ 220 (584)
..+.+++|.
T Consensus 277 ~~L~Ls~N~ 285 (312)
T 1wwl_A 277 SVLDLSYNR 285 (312)
T ss_dssp EEEECCSSC
T ss_pred eEEECCCCC
Confidence 677777775
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.3e-17 Score=176.89 Aligned_cols=150 Identities=21% Similarity=0.133 Sum_probs=105.0
Q ss_pred CEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcc----------------cccCCCCCCEEecCCCcccCCC
Q 007935 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPA----------------NLFNATNLVYLDLAHNSFCGPI 129 (584)
Q Consensus 66 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~----------------~~~~l~~L~~L~l~~N~l~~~~ 129 (584)
.++.|+|++|++++..| |+.+++|++|+|++|.|++..+. ....+++|+.|+|++|++++..
T Consensus 59 ~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N~l~~~~~~~l~~L~~L~L~~N~l~~~~ 136 (487)
T 3oja_A 59 KLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCSRGQGKKNIYLANNKITMLR 136 (487)
T ss_dssp TCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCCCEEECCCSSCEEEECCSSCCCSGG
T ss_pred CCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCCCCcCEEECcCCcCCCCCccccCCCCEEECCCCCCCCCC
Confidence 45556666666555443 55555555555555554431110 0012345666666666666666
Q ss_pred CcccCCCCCCCeeecccCCCCCCchHHhh-ccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCc
Q 007935 130 PDRIKTLKNLTHLDLSSNLLNGSLPEFLL-DLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSL 208 (584)
Q Consensus 130 p~~~~~l~~L~~L~ls~N~l~~~~p~~~~-~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 208 (584)
|..|+.+++|+.|+|++|.|++.+|..+. .+++|+ .|+|++|.|++..+ +..+++|+.|+|++|.|++.+|.+..+
T Consensus 137 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~-~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~~~~~l 213 (487)
T 3oja_A 137 DLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLE-HLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGPEFQSA 213 (487)
T ss_dssp GBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCC-EEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECGGGGGG
T ss_pred chhhcCCCCCCEEECCCCCCCCcChHHHhhhCCccc-EEecCCCccccccc--cccCCCCCEEECCCCCCCCCCHhHcCC
Confidence 77778888888888888888887787776 688888 88888888886633 345899999999999999998887778
Q ss_pred cccCCcccCCCC
Q 007935 209 LNQGPTAFSGNP 220 (584)
Q Consensus 209 ~~~~~~~~~~n~ 220 (584)
.++..+.+++|.
T Consensus 214 ~~L~~L~Ls~N~ 225 (487)
T 3oja_A 214 AGVTWISLRNNK 225 (487)
T ss_dssp TTCSEEECTTSC
T ss_pred CCccEEEecCCc
Confidence 888888888886
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.69 E-value=8e-17 Score=164.18 Aligned_cols=156 Identities=26% Similarity=0.213 Sum_probs=133.3
Q ss_pred eeeEecCCCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCccccc-CCCCCCEEecCCCcccCCCCcccCCC
Q 007935 58 SGIHCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNSFCGPIPDRIKTL 136 (584)
Q Consensus 58 ~gv~c~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~p~~~~~l 136 (584)
....|.. ..+++++++|+. +|..+. ..++.|+|++|+|++..+..+. .+++|++|+|++|+|++..|..|.++
T Consensus 14 ~~C~C~~---~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l 87 (361)
T 2xot_A 14 ANCLCAS---NILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPV 87 (361)
T ss_dssp TTCEEET---TEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTC
T ss_pred CCCEECC---CEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCC
Confidence 3567764 478999999984 676554 4689999999999987777777 99999999999999998878889999
Q ss_pred CCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCC----CCccccC
Q 007935 137 KNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQV----GSLLNQG 212 (584)
Q Consensus 137 ~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~----~~~~~~~ 212 (584)
++|++|+|++|+|++..+..|.++++|+ .|+|++|+|++..|..|.++++|+.|+|++|.|++..+.. ..+.++.
T Consensus 88 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~-~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~ 166 (361)
T 2xot_A 88 PNLRYLDLSSNHLHTLDEFLFSDLQALE-VLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLM 166 (361)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCC-EEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCC
T ss_pred CCCCEEECCCCcCCcCCHHHhCCCcCCC-EEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCC
Confidence 9999999999999977777899999999 9999999999888999999999999999999999866543 3456677
Q ss_pred CcccCCCC
Q 007935 213 PTAFSGNP 220 (584)
Q Consensus 213 ~~~~~~n~ 220 (584)
.+.+++|.
T Consensus 167 ~L~L~~N~ 174 (361)
T 2xot_A 167 LLDLSSNK 174 (361)
T ss_dssp EEECCSSC
T ss_pred EEECCCCC
Confidence 77777775
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.69 E-value=2.8e-17 Score=178.34 Aligned_cols=158 Identities=22% Similarity=0.300 Sum_probs=89.9
Q ss_pred CEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCc-ccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIP-ANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 66 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
+++.|+|++|++.+..+. +..+++|+.|++++|.+.+..| ..+..+++|++|+|++|++++..|..|.++++|+.|+|
T Consensus 374 ~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 452 (570)
T 2z63_A 374 SLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKM 452 (570)
T ss_dssp CCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEEC
T ss_pred ccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEEC
Confidence 344555555555433222 5555555555555555555433 34555566666666666666555555666666666666
Q ss_pred ccCCCC-CCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCC-CCCccccCCcccCCCCCC
Q 007935 145 SSNLLN-GSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ-VGSLLNQGPTAFSGNPGL 222 (584)
Q Consensus 145 s~N~l~-~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~~~~~~~~~~~n~~l 222 (584)
++|.++ +.+|..+..+++|+ .|+|++|++++..|..|.++++|+.|+|++|.+++.+|. +..+.++..+.+.+|+..
T Consensus 453 ~~n~l~~~~~p~~~~~l~~L~-~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 531 (570)
T 2z63_A 453 AGNSFQENFLPDIFTELRNLT-FLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWD 531 (570)
T ss_dssp TTCEEGGGEECSCCTTCTTCC-EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred cCCcCccccchhhhhcccCCC-EEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCccc
Confidence 666665 45566666666666 666666666655566666666666666666666665553 334445555556666555
Q ss_pred CCC
Q 007935 223 CGF 225 (584)
Q Consensus 223 ~~~ 225 (584)
|..
T Consensus 532 ~~~ 534 (570)
T 2z63_A 532 CSC 534 (570)
T ss_dssp CCT
T ss_pred CCC
Confidence 443
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=2.9e-18 Score=184.49 Aligned_cols=151 Identities=8% Similarity=-0.134 Sum_probs=99.2
Q ss_pred eceeecCceEEEEEecCCCCCCCceEEEEEEecCCC---------cchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCC
Q 007935 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD---------ATWRFKDFESEVEAIARV-QHPNIVRLKAFYYAND 418 (584)
Q Consensus 349 ~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~---------~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~ 418 (584)
..+.|++|.++.++..-.+ ..+|||.+.... .....++|.+|+++|+++ +|+||+++++++++++
T Consensus 241 ~~~~~~~~~h~~~rr~~fg-----~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~ 315 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFG-----EDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQ 315 (569)
T ss_dssp C-C--------CCEEEEEC-----SSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSS
T ss_pred ccccCCccccccccccccc-----ceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECC
Confidence 4556666666655443333 679999997641 122346799999999999 7999999999999999
Q ss_pred ceeEeeecccCCcHHHHHh----------------------cc--cccccCCCCccccccCeEEecCCCccc--------
Q 007935 419 EKLLISDFIRNGSLYAALH----------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI-------- 466 (584)
Q Consensus 419 ~~~lV~Ey~~~GsL~~~L~----------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~-------- 466 (584)
+.||||||++||+|.++|. +. -|+|++++|+.+..++.++..|||...
T Consensus 316 ~~yLVMEyv~G~~L~d~i~~~~~l~~~~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~~ 395 (569)
T 4azs_A 316 SGWLVMEKLPGRLLSDMLAAGEEIDREKILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSW 395 (569)
T ss_dssp EEEEEEECCCSEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---CC
T ss_pred EEEEEEecCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCCCCcc
Confidence 9999999999999976664 33 379999999999999999999998432
Q ss_pred ---ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCC
Q 007935 467 ---SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRL 506 (584)
Q Consensus 467 ---~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~ 506 (584)
.+||+.|||||++ .+ .+..++|+||+|++++++.++..
T Consensus 396 ~~t~vGTp~YmAPE~l-~g-~~~~~~d~~s~g~~~~~l~~~~~ 436 (569)
T 4azs_A 396 PTNLVQSFFVFVNELF-AE-NKSWNGFWRSAPVHPFNLPQPWS 436 (569)
T ss_dssp SHHHHHHHHHHHHHHC-------------------CCCCTTHH
T ss_pred ccCceechhhccHHHh-CC-CCCCcccccccccchhhhccccc
Confidence 3689999999985 43 57789999999999887766543
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.68 E-value=6.7e-17 Score=171.40 Aligned_cols=156 Identities=21% Similarity=0.188 Sum_probs=138.0
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|+|++|++++..|..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|..+++|+.|+|
T Consensus 56 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 135 (477)
T 2id5_A 56 PHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEV 135 (477)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEE
T ss_pred CCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEEC
Confidence 57999999999999998999999999999999999999755566889999999999999999888999999999999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCC-CCCCccccCCcccCCCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIP-QVGSLLNQGPTAFSGNPG 221 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~~~~~~~~~~~n~~ 221 (584)
++|.+++..|..|.++++|+ .|+|++|++++..+..|.++++|+.|+|++|.+++..+ .+..+.++..+.+++|+.
T Consensus 136 ~~n~l~~~~~~~~~~l~~L~-~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~ 212 (477)
T 2id5_A 136 GDNDLVYISHRAFSGLNSLE-QLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPY 212 (477)
T ss_dssp CCTTCCEECTTSSTTCTTCC-EEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTT
T ss_pred CCCccceeChhhccCCCCCC-EEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCcc
Confidence 99999988888999999999 99999999998777789999999999999999998766 344555666667776653
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.68 E-value=2.4e-17 Score=164.41 Aligned_cols=152 Identities=18% Similarity=0.108 Sum_probs=120.4
Q ss_pred CCEEEEEcCCCCCcccCC----ccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCC--C--CcccCCC
Q 007935 65 NRVTSLYLPNRNLTGYMP----SELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGP--I--PDRIKTL 136 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~----~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~--~--p~~~~~l 136 (584)
.+++.|+|++|++++..+ ..+..+++|++|+|++|.+++..|..|..+++|++|+|++|++.+. + +..+..+
T Consensus 117 ~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l 196 (310)
T 4glp_A 117 LALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKF 196 (310)
T ss_dssp BCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSS
T ss_pred CCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcC
Confidence 468899999999987665 4556788999999999999887788888999999999999998652 2 2334688
Q ss_pred CCCCeeecccCCCCCCchH----HhhccccCccEEEeccccCccccCccccCC---CCCcEEEeecCCCccCCCCCCCcc
Q 007935 137 KNLTHLDLSSNLLNGSLPE----FLLDLRALTGTLNLSFNQFSGQIPEMYGHF---PVMVSLDLRNNNLSGEIPQVGSLL 209 (584)
Q Consensus 137 ~~L~~L~ls~N~l~~~~p~----~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l---~~L~~L~l~~N~l~~~~p~~~~~~ 209 (584)
++|++|+|++|+++ .+|. .+.++++|+ .|+|++|+|++..|+.+..+ ++|+.|+|++|.|+. +|... ..
T Consensus 197 ~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~-~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~~-lp~~~-~~ 272 (310)
T 4glp_A 197 PAIQNLALRNTGME-TPTGVCAALAAAGVQPH-SLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQ-VPKGL-PA 272 (310)
T ss_dssp CCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCS-SEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCCS-CCSCC-CS
T ss_pred CCCCEEECCCCCCC-chHHHHHHHHhcCCCCC-EEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCCc-hhhhh-cC
Confidence 89999999999997 5554 257788998 99999999998878888777 689999999999994 45322 25
Q ss_pred ccCCcccCCCC
Q 007935 210 NQGPTAFSGNP 220 (584)
Q Consensus 210 ~~~~~~~~~n~ 220 (584)
++..+.+++|.
T Consensus 273 ~L~~L~Ls~N~ 283 (310)
T 4glp_A 273 KLRVLDLSSNR 283 (310)
T ss_dssp CCSCEECCSCC
T ss_pred CCCEEECCCCc
Confidence 67777777776
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.5e-16 Score=173.31 Aligned_cols=110 Identities=20% Similarity=0.197 Sum_probs=68.6
Q ss_pred CEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecc
Q 007935 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLS 145 (584)
Q Consensus 66 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls 145 (584)
+++.|+|++|++++..|..|+.+++|++|+|++|.|++..|..|.++++|++|+|++|.|++..+..|.++++|++|+|+
T Consensus 76 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls 155 (597)
T 3oja_B 76 QVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMS 155 (597)
T ss_dssp CCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEee
Confidence 56666666666666666666666666666666666666555556666666666666666664444445666666666666
Q ss_pred cCCCCCCchHHhhccccCccEEEeccccCcc
Q 007935 146 SNLLNGSLPEFLLDLRALTGTLNLSFNQFSG 176 (584)
Q Consensus 146 ~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~ 176 (584)
+|.+++..|..|.++++|+ .|+|++|.+++
T Consensus 156 ~N~l~~~~~~~~~~l~~L~-~L~L~~N~l~~ 185 (597)
T 3oja_B 156 NNNLERIEDDTFQATTSLQ-NLQLSSNRLTH 185 (597)
T ss_dssp SSCCCBCCTTTTTTCTTCC-EEECTTSCCSB
T ss_pred CCcCCCCChhhhhcCCcCc-EEECcCCCCCC
Confidence 6666655555566666665 66666555543
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.68 E-value=1.8e-16 Score=156.22 Aligned_cols=157 Identities=24% Similarity=0.245 Sum_probs=141.0
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|+|++|+|++..+. +.+++|++|+|++|+|+ .+|..+..+++|++|+|++|+|++..|..|.++++|+.|+|
T Consensus 55 ~~L~~L~L~~n~l~~~~~~--~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L 131 (290)
T 1p9a_G 55 TRLTQLNLDRAELTKLQVD--GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYL 131 (290)
T ss_dssp TTCCEEECTTSCCCEEECC--SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCcccCC--CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEEC
Confidence 5799999999999975443 88999999999999998 58989999999999999999999877788999999999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCCCCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGLCG 224 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~l~~ 224 (584)
++|+|++..+..|..+++|+ .|+|++|+|++..+..|..+++|+.|+|++|+|+..++.+.....+..+.+.+|+..|.
T Consensus 132 ~~N~l~~~~~~~~~~l~~L~-~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 132 KGNELKTLPPGLLTPTPKLE-KLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp TTSCCCCCCTTTTTTCTTCC-EEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred CCCCCCccChhhcccccCCC-EEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccCc
Confidence 99999977777788999999 99999999997777788999999999999999997766666666778888999999887
Q ss_pred C
Q 007935 225 F 225 (584)
Q Consensus 225 ~ 225 (584)
+
T Consensus 211 c 211 (290)
T 1p9a_G 211 C 211 (290)
T ss_dssp G
T ss_pred C
Confidence 5
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=9.6e-17 Score=177.98 Aligned_cols=159 Identities=26% Similarity=0.267 Sum_probs=113.0
Q ss_pred EEEEEcCCCCCc--ccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCC--------cccCCC
Q 007935 67 VTSLYLPNRNLT--GYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIP--------DRIKTL 136 (584)
Q Consensus 67 v~~l~l~~~~l~--~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p--------~~~~~l 136 (584)
++.|++++|.+. +.+|..|..+++|+.|+|++|+|++..|..|..+++|++|+|++|++++..+ ..|.++
T Consensus 456 L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l 535 (680)
T 1ziw_A 456 LQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGL 535 (680)
T ss_dssp CCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTC
T ss_pred cccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCC
Confidence 444444444443 3456677777778888888887776666667777888888888887765321 236777
Q ss_pred CCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCC--CccccCCc
Q 007935 137 KNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVG--SLLNQGPT 214 (584)
Q Consensus 137 ~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~--~~~~~~~~ 214 (584)
++|+.|+|++|+++...+..|.++++|+ .|+|++|++++..+..|.++++|+.|+|++|.|++.+|... .+.++..+
T Consensus 536 ~~L~~L~L~~N~l~~i~~~~~~~l~~L~-~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l 614 (680)
T 1ziw_A 536 SHLHILNLESNGFDEIPVEVFKDLFELK-IIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTEL 614 (680)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCC-EEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEE
T ss_pred CCCCEEECCCCCCCCCCHHHcccccCcc-eeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEE
Confidence 8888888888888733334578888888 88888888887666777888888888888888887766321 35567777
Q ss_pred ccCCCCCCCCCC
Q 007935 215 AFSGNPGLCGFP 226 (584)
Q Consensus 215 ~~~~n~~l~~~~ 226 (584)
.+.+|+..|+++
T Consensus 615 ~l~~N~~~c~c~ 626 (680)
T 1ziw_A 615 DMRFNPFDCTCE 626 (680)
T ss_dssp ECTTCCCCBCCC
T ss_pred EccCCCcccCCc
Confidence 888999888765
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.2e-16 Score=147.31 Aligned_cols=123 Identities=28% Similarity=0.338 Sum_probs=111.6
Q ss_pred CCCCcceeeEecC-----------CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEec
Q 007935 52 STPCHWSGIHCIR-----------NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDL 120 (584)
Q Consensus 52 ~~~c~w~gv~c~~-----------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 120 (584)
.|.|.|..+.|.. ..++.|+|++|+|+ .+|..|..+++|+.|+|++|.|++..|..|.++++|++|+|
T Consensus 7 ~C~C~~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~L 85 (193)
T 2wfh_A 7 ECTCLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLIL 85 (193)
T ss_dssp TCEEETTEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCEeCCCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEEC
Confidence 4667888888864 36899999999998 77899999999999999999999887888999999999999
Q ss_pred CCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCcc
Q 007935 121 AHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSG 176 (584)
Q Consensus 121 ~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~ 176 (584)
++|+|++..|..|.++++|+.|+|++|+|+...+..|..+++|+ .|+|++|++..
T Consensus 86 s~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~-~L~L~~N~~~C 140 (193)
T 2wfh_A 86 SYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALS-HLAIGANPLYC 140 (193)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCC-EEECCSSCEEC
T ss_pred CCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCcccc-EEEeCCCCeec
Confidence 99999988888999999999999999999966666789999999 99999999974
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.67 E-value=8e-17 Score=172.36 Aligned_cols=152 Identities=30% Similarity=0.462 Sum_probs=123.2
Q ss_pred CCCCCCCCCCC-----cceee-EecCCCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEE
Q 007935 45 DSWSESDSTPC-----HWSGI-HCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYL 118 (584)
Q Consensus 45 ~~w~~~~~~~c-----~w~gv-~c~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L 118 (584)
.+|.. +..|| .|.|+ .|...+++.|+|++|+|++ +|..+. ++|+.|+|++|+|+ .+| ..+++|++|
T Consensus 34 ~~W~~-~~~~~~~~~~~~~~l~~C~~~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L 105 (571)
T 3cvr_A 34 DKWEK-QALPGENRNEAVSLLKECLINQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYL 105 (571)
T ss_dssp HHHHT-TCCTTCCHHHHHHHHHHHHHTTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEE
T ss_pred HHHhc-cCCccccccchhhhccccccCCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEE
Confidence 35643 34567 79999 7987789999999999997 777663 78999999999998 578 457899999
Q ss_pred ecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCC
Q 007935 119 DLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNL 198 (584)
Q Consensus 119 ~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l 198 (584)
+|++|+|++ +|. +.+ +|+.|+|++|+|++ +|. .+++|+ .|+|++|+|++ +|. .+++|+.|+|++|.|
T Consensus 106 ~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~-~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L 172 (571)
T 3cvr_A 106 DACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLE-YINADNNQLTM-LPE---LPTSLEVLSVRNNQL 172 (571)
T ss_dssp ECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCC-EEECCSSCCSC-CCC---CCTTCCEEECCSSCC
T ss_pred EccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCcccc-EEeCCCCccCc-CCC---cCCCcCEEECCCCCC
Confidence 999999997 777 665 89999999999986 776 678888 99999999986 665 578899999999999
Q ss_pred ccCCCCCCCccccCCcccCCCC
Q 007935 199 SGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 199 ~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
++ +|.+. .++..+.+++|.
T Consensus 173 ~~-lp~l~--~~L~~L~Ls~N~ 191 (571)
T 3cvr_A 173 TF-LPELP--ESLEALDVSTNL 191 (571)
T ss_dssp SC-CCCCC--TTCCEEECCSSC
T ss_pred CC-cchhh--CCCCEEECcCCC
Confidence 88 55433 566667777775
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=1.2e-16 Score=175.59 Aligned_cols=171 Identities=19% Similarity=0.198 Sum_probs=129.8
Q ss_pred CCCCCCCCCCCCCcceeeEecCCCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCC
Q 007935 43 ALDSWSESDSTPCHWSGIHCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAH 122 (584)
Q Consensus 43 ~l~~w~~~~~~~c~w~gv~c~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~ 122 (584)
.+++|..+ .|..|....|.... +..+-++.+|+ .+|..+. +++++|+|++|+|++..|..|.++++|++|+|++
T Consensus 12 ~~~~~~~~--~p~~~~~c~~~~~~-~~~~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~ 85 (635)
T 4g8a_A 12 KLAAANSS--IPESWEPCVEVVPN-ITYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSR 85 (635)
T ss_dssp ---------------CCSEEEETT-TEEECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTT
T ss_pred hhhcccCC--CCCCCCCccccCCC-CEEECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCC
Confidence 45556432 34445444443222 23466677777 5676553 4799999999999987778899999999999999
Q ss_pred CcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccC-
Q 007935 123 NSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGE- 201 (584)
Q Consensus 123 N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~- 201 (584)
|+|++..|..|.+|++|++|+|++|+|++..|..|.++++|+ .|+|++|+|++..+..|+++++|++|+|++|.+++.
T Consensus 86 N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~-~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~ 164 (635)
T 4g8a_A 86 CEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQ-KLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFK 164 (635)
T ss_dssp CCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCC-EEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCC
T ss_pred CcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCC-EEECCCCcCCCCChhhhhcCcccCeeccccCccccCC
Confidence 999987788899999999999999999966667899999999 999999999988788899999999999999999863
Q ss_pred CCC-CCCccccCCcccCCCC
Q 007935 202 IPQ-VGSLLNQGPTAFSGNP 220 (584)
Q Consensus 202 ~p~-~~~~~~~~~~~~~~n~ 220 (584)
+|. +..+.++..+.+.+|.
T Consensus 165 ~~~~~~~l~~L~~L~L~~N~ 184 (635)
T 4g8a_A 165 LPEYFSNLTNLEHLDLSSNK 184 (635)
T ss_dssp CCGGGGGCTTCCEEECCSSC
T ss_pred CchhhccchhhhhhcccCcc
Confidence 453 3445667777777775
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.1e-16 Score=173.71 Aligned_cols=138 Identities=18% Similarity=0.146 Sum_probs=125.3
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|+|++|++++..+..|..+++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 46899999999999888889999999999999999999877888999999999999999999888889999999999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCcc-ccCccccCCCCCcEEEeecCCCccCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSG-QIPEMYGHFPVMVSLDLRNNNLSGEIP 203 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p 203 (584)
++|++++..+..+.++++|+ .|++++|++++ .+|..|+++++|+.|++++|.+++..|
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~-~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~ 166 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLK-ELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC 166 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCC-EEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECG
T ss_pred cccccccCCCcccccccccc-EEecCCCccceecChhhhcccCCCCEEeCcCCccceecH
Confidence 99999965555799999999 99999999987 479999999999999999999998766
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.7e-16 Score=161.38 Aligned_cols=133 Identities=17% Similarity=0.182 Sum_probs=109.5
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCc--ccCCCCCCCee
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPD--RIKTLKNLTHL 142 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~--~~~~l~~L~~L 142 (584)
.+++.|+|++|++++..|..|..+++|++|+|++|++++..+..+..+++|++|+|++|++++ +|. .|..+++|++|
T Consensus 76 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-l~~~~~~~~l~~L~~L 154 (353)
T 2z80_A 76 VNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKT-LGETSLFSHLTKLQIL 154 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSS-SCSSCSCTTCTTCCEE
T ss_pred CCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcc-cCchhhhccCCCCcEE
Confidence 579999999999998888899999999999999999997545558899999999999999984 554 78889999999
Q ss_pred ecccCC-CCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCc
Q 007935 143 DLSSNL-LNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLS 199 (584)
Q Consensus 143 ~ls~N~-l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 199 (584)
+|++|+ +++..|..+.++++|+ .|++++|++++..|..|..+++|++|++++|.++
T Consensus 155 ~l~~n~~~~~~~~~~~~~l~~L~-~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~ 211 (353)
T 2z80_A 155 RVGNMDTFTKIQRKDFAGLTFLE-ELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI 211 (353)
T ss_dssp EEEESSSCCEECTTTTTTCCEEE-EEEEEETTCCEECTTTTTTCSEEEEEEEECSCST
T ss_pred ECCCCccccccCHHHccCCCCCC-EEECCCCCcCccCHHHHhccccCCeecCCCCccc
Confidence 999984 6655567888888888 8999999888887888877666666666655543
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=3.5e-16 Score=157.41 Aligned_cols=151 Identities=22% Similarity=0.277 Sum_probs=75.4
Q ss_pred CEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccC--CCCcccCCCCC-----
Q 007935 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG--PIPDRIKTLKN----- 138 (584)
Q Consensus 66 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~p~~~~~l~~----- 138 (584)
+++.|+|++|+++ .+|..+. ++|++|++++|.+++..+..+..+++|++|+|++|+++. ..+..|.++++
T Consensus 101 ~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~ 177 (330)
T 1xku_A 101 KLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIR 177 (330)
T ss_dssp TCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEE
T ss_pred CCCEEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEE
Confidence 4666666666665 3333332 455555555555554444444555555555555555532 33444444444
Q ss_pred ----------------CCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCC
Q 007935 139 ----------------LTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEI 202 (584)
Q Consensus 139 ----------------L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 202 (584)
|+.|+|++|++++..|..+..+++|+ .|+|++|++++..+..|..+++|+.|+|++|.++..+
T Consensus 178 l~~n~l~~l~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~-~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp 256 (330)
T 1xku_A 178 IADTNITTIPQGLPPSLTELHLDGNKITKVDAASLKGLNNLA-KLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVP 256 (330)
T ss_dssp CCSSCCCSCCSSCCTTCSEEECTTSCCCEECTGGGTTCTTCC-EEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCC
T ss_pred CCCCccccCCccccccCCEEECCCCcCCccCHHHhcCCCCCC-EEECCCCcCceeChhhccCCCCCCEEECCCCcCccCC
Confidence 45555555555544445555555555 5555555555444445555555555555555555333
Q ss_pred CCCCCccccCCcccCCCC
Q 007935 203 PQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 203 p~~~~~~~~~~~~~~~n~ 220 (584)
..+..+.++..+.+.+|.
T Consensus 257 ~~l~~l~~L~~L~l~~N~ 274 (330)
T 1xku_A 257 GGLADHKYIQVVYLHNNN 274 (330)
T ss_dssp TTTTTCSSCCEEECCSSC
T ss_pred hhhccCCCcCEEECCCCc
Confidence 333334444444444443
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.66 E-value=5.8e-16 Score=155.95 Aligned_cols=149 Identities=21% Similarity=0.250 Sum_probs=77.2
Q ss_pred EEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCC--CCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 67 VTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSK--PIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 67 v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
++.|+|++|++++..+..|..+++|++|+|++|.++. ..|..+..+ +|++|++++|++++ +|..+. ++|+.|+|
T Consensus 125 L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l 200 (332)
T 2ft3_A 125 LVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHL 200 (332)
T ss_dssp CCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBC
T ss_pred CCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEEC
Confidence 4444444444443333344555555555555555531 333333333 33333333333321 222221 45666666
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
++|.+++..|..+..+++|+ .|+|++|++++..+..|..+++|+.|+|++|.++..++.+..+.++..+.+.+|.
T Consensus 201 ~~n~i~~~~~~~l~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~L~~L~l~~N~ 275 (332)
T 2ft3_A 201 DHNKIQAIELEDLLRYSKLY-RLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSRVPAGLPDLKLLQVVYLHTNN 275 (332)
T ss_dssp CSSCCCCCCTTSSTTCTTCS-CCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCCBCCTTGGGCTTCCEEECCSSC
T ss_pred CCCcCCccCHHHhcCCCCCC-EEECCCCcCCcCChhHhhCCCCCCEEECCCCcCeecChhhhcCccCCEEECCCCC
Confidence 66666655556666666666 6666666666665666666666666666666666433334444555555566554
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.66 E-value=4.7e-16 Score=160.32 Aligned_cols=84 Identities=26% Similarity=0.361 Sum_probs=37.4
Q ss_pred CEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCccc-ccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPAN-LFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 66 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~-~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
+++.|+|++|++++..|..|+.+++|++|+|++|.++. +|.. |..+++|++|+|++|++++..|..|..+++|+.|+|
T Consensus 94 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 172 (390)
T 3o6n_A 94 TIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSS-LPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQL 172 (390)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEEC
T ss_pred CcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCc-CCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEEC
Confidence 34444444444444444444444444444444444442 2222 344444444444444444444444444444444444
Q ss_pred ccCCCC
Q 007935 145 SSNLLN 150 (584)
Q Consensus 145 s~N~l~ 150 (584)
++|+++
T Consensus 173 ~~n~l~ 178 (390)
T 3o6n_A 173 SSNRLT 178 (390)
T ss_dssp CSSCCS
T ss_pred CCCcCC
Confidence 444443
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.66 E-value=2.7e-16 Score=145.76 Aligned_cols=130 Identities=25% Similarity=0.319 Sum_probs=114.3
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|+|++|.++ .++.+..+++|++|+|++|.+++..|..+..+++|++|+|++|++++..|..+..+++|+.|+|
T Consensus 66 ~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L 143 (197)
T 4ezg_A 66 HNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDL 143 (197)
T ss_dssp TTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEEC
T ss_pred CCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEc
Confidence 47999999999775 3458999999999999999999888899999999999999999999888999999999999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCcc
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSG 200 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 200 (584)
++|.+.+.+| .+..+++|+ .|++++|++++ ++ .+..+++|+.|++++|++.+
T Consensus 144 ~~n~~i~~~~-~l~~l~~L~-~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 144 SYNGAITDIM-PLKTLPELK-SLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CSCTBCCCCG-GGGGCSSCC-EEECTTBCCCC-CT-TGGGCSSCCEEEECBC----
T ss_pred cCCCCccccH-hhcCCCCCC-EEECCCCCCcC-hH-HhccCCCCCEEEeeCcccCC
Confidence 9998333777 699999999 99999999996 44 78899999999999999864
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=99.66 E-value=3.3e-16 Score=154.51 Aligned_cols=144 Identities=28% Similarity=0.340 Sum_probs=100.4
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|+|++|++++..+ +..+++|++|+|++|.+++ +| .+..+++|++|+|++|++++. +.+..+++|+.|+|
T Consensus 68 ~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l 141 (291)
T 1h6t_A 68 PNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYL 141 (291)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEEC
T ss_pred CCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEc
Confidence 467777777777775443 7777777777777777765 33 477777777777777777753 45677777777777
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
++|++++. ..+..+++|+ .|+|++|++++..| +..+++|+.|+|++|.+++. |.+..+.++..+.+.+|+
T Consensus 142 ~~n~l~~~--~~l~~l~~L~-~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l-~~l~~l~~L~~L~l~~n~ 211 (291)
T 1h6t_A 142 GNNKITDI--TVLSRLTKLD-TLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQE 211 (291)
T ss_dssp CSSCCCCC--GGGGGCTTCS-EEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEEEEEEE
T ss_pred cCCcCCcc--hhhccCCCCC-EEEccCCccccchh--hcCCCccCEEECCCCcCCCC-hhhccCCCCCEEECcCCc
Confidence 77777743 4577777777 77777777775544 77777777777777777753 445555566666666664
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.5e-16 Score=158.69 Aligned_cols=155 Identities=21% Similarity=0.160 Sum_probs=128.5
Q ss_pred CCEEEEEcCCCCCcccCCccc--cCCCCCCEEEccCCCCCCCCc----ccccCCCCCCEEecCCCcccCCCCcccCCCCC
Q 007935 65 NRVTSLYLPNRNLTGYMPSEL--GLLNSLTRLSLASNNFSKPIP----ANLFNATNLVYLDLAHNSFCGPIPDRIKTLKN 138 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~--~~l~~L~~L~l~~n~l~~~~p----~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~ 138 (584)
.+++.|+|++|++++..|..+ ..+++|++|+|++|.+++..| ..+..+++|++|+|++|++++..|..|..+++
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 359999999999999999988 999999999999999998655 44567999999999999999888899999999
Q ss_pred CCeeecccCCCCCC--chH--HhhccccCccEEEeccccCccccCc----cccCCCCCcEEEeecCCCccCCC-CCCCc-
Q 007935 139 LTHLDLSSNLLNGS--LPE--FLLDLRALTGTLNLSFNQFSGQIPE----MYGHFPVMVSLDLRNNNLSGEIP-QVGSL- 208 (584)
Q Consensus 139 L~~L~ls~N~l~~~--~p~--~~~~l~~L~~~l~l~~N~l~~~~p~----~~~~l~~L~~L~l~~N~l~~~~p-~~~~~- 208 (584)
|++|||++|++++. ++. .+..+++|+ .|+|++|+++ .++. .++++++|++|+|++|.|++..| .+..+
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~-~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~ 248 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQ-NLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCM 248 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCC-SCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCC
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCC-EEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhcc
Confidence 99999999998753 332 236889999 9999999997 3333 35788999999999999999855 34444
Q ss_pred --cccCCcccCCCCC
Q 007935 209 --LNQGPTAFSGNPG 221 (584)
Q Consensus 209 --~~~~~~~~~~n~~ 221 (584)
.++..+.+++|..
T Consensus 249 ~~~~L~~L~Ls~N~l 263 (310)
T 4glp_A 249 WSSALNSLNLSFAGL 263 (310)
T ss_dssp CCTTCCCEECCSSCC
T ss_pred CcCcCCEEECCCCCC
Confidence 4677778888863
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.65 E-value=2.6e-16 Score=141.87 Aligned_cols=131 Identities=23% Similarity=0.172 Sum_probs=115.6
Q ss_pred CCCCCCEEEccCCCCC-CCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCcc
Q 007935 87 LLNSLTRLSLASNNFS-KPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTG 165 (584)
Q Consensus 87 ~l~~L~~L~l~~n~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~ 165 (584)
..++|++|+|++|+++ +.+|..+..+++|++|+|++|++++. ..+..+++|++|+|++|++++.+|..+..+++|+
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~- 98 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLT- 98 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCC-
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCC-
Confidence 3478999999999998 78998899999999999999999965 7899999999999999999988999999999999
Q ss_pred EEEeccccCcccc-CccccCCCCCcEEEeecCCCccCCC----CCCCccccCCcccCCCC
Q 007935 166 TLNLSFNQFSGQI-PEMYGHFPVMVSLDLRNNNLSGEIP----QVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 166 ~l~l~~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~p----~~~~~~~~~~~~~~~n~ 220 (584)
.|+|++|++++.. +..+..+++|+.|++++|.+++.++ .+..+.++..+.+.+|.
T Consensus 99 ~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~ 158 (168)
T 2ell_A 99 HLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDRE 158 (168)
T ss_dssp EEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETT
T ss_pred EEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCC
Confidence 9999999999643 3789999999999999999998776 45566667777776665
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.65 E-value=1.9e-16 Score=139.72 Aligned_cols=113 Identities=22% Similarity=0.217 Sum_probs=104.3
Q ss_pred CCCCCEEEccCCCCC-CCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccE
Q 007935 88 LNSLTRLSLASNNFS-KPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGT 166 (584)
Q Consensus 88 l~~L~~L~l~~n~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~ 166 (584)
.++|+.|++++|.++ +.+|..+..+++|++|+|++|++++. ..+..+++|++|+|++|++++.+|..+..+++|+ .
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~-~ 92 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLT-H 92 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCC-E
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCC-E
Confidence 468999999999998 78999999999999999999999976 7799999999999999999988999999999999 9
Q ss_pred EEeccccCccc-cCccccCCCCCcEEEeecCCCccCCC
Q 007935 167 LNLSFNQFSGQ-IPEMYGHFPVMVSLDLRNNNLSGEIP 203 (584)
Q Consensus 167 l~l~~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p 203 (584)
|++++|++++. .+..+..+++|+.|++++|.+++..+
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 130 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLND 130 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTT
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHH
Confidence 99999999974 45889999999999999999998765
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.65 E-value=1.8e-16 Score=151.73 Aligned_cols=153 Identities=16% Similarity=0.171 Sum_probs=108.8
Q ss_pred CCEEEEEcCCCC-CcccCCccccCCCCCCEEEccC-CCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCC--
Q 007935 65 NRVTSLYLPNRN-LTGYMPSELGLLNSLTRLSLAS-NNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLT-- 140 (584)
Q Consensus 65 ~~v~~l~l~~~~-l~~~~~~~~~~l~~L~~L~l~~-n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~-- 140 (584)
.+++.|+|++|+ +++..+..|..+++|++|+|++ |+|++..+..|.++++|++|+|++|++++ +|. |..+++|+
T Consensus 55 ~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L 132 (239)
T 2xwt_C 55 PNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIF 132 (239)
T ss_dssp TTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSE
T ss_pred CCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccc
Confidence 468888888886 7766667788888888888887 88886556677788888888888888875 665 77777777
Q ss_pred -eeecccC-CCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCC-CccCCCC-CCCc-cccCCcc
Q 007935 141 -HLDLSSN-LLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNN-LSGEIPQ-VGSL-LNQGPTA 215 (584)
Q Consensus 141 -~L~ls~N-~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~p~-~~~~-~~~~~~~ 215 (584)
.|+|++| ++++..+..|.++++|+..|++++|+++ .+|......++|+.|+|++|. +++..+. +..+ .++..+.
T Consensus 133 ~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~ 211 (239)
T 2xwt_C 133 FILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLD 211 (239)
T ss_dssp EEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEE
T ss_pred cEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEE
Confidence 8888888 7775555567777777435778888887 444433333778888888884 7765553 3334 5566666
Q ss_pred cCCCC
Q 007935 216 FSGNP 220 (584)
Q Consensus 216 ~~~n~ 220 (584)
+++|.
T Consensus 212 l~~N~ 216 (239)
T 2xwt_C 212 VSQTS 216 (239)
T ss_dssp CTTCC
T ss_pred CCCCc
Confidence 66665
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.63 E-value=1e-15 Score=148.59 Aligned_cols=143 Identities=22% Similarity=0.298 Sum_probs=121.2
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|++++|+++. ++ .+..+++|+.|+|++|+|++. |. +..+++|++|+|++|++++ +|.. .. ++|+.|+|
T Consensus 41 ~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~-~~-l~~l~~L~~L~L~~N~l~~-l~~~-~~-~~L~~L~L 113 (263)
T 1xeu_A 41 SGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDL-SP-LKDLTKLEELSVNRNRLKN-LNGI-PS-ACLSRLFL 113 (263)
T ss_dssp TTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCSSCCEEECCSSCCSC-CTTC-CC-SSCCEEEC
T ss_pred CcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCC-hh-hccCCCCCEEECCCCccCC-cCcc-cc-CcccEEEc
Confidence 578999999999984 45 789999999999999999974 44 8999999999999999985 4543 33 89999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
++|++++ +| .+..+++|+ .|+|++|++++. + .+..+++|+.|+|++|.+++. +.+..+.++..+.+.+|+
T Consensus 114 ~~N~l~~-~~-~l~~l~~L~-~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~-~~l~~l~~L~~L~l~~N~ 183 (263)
T 1xeu_A 114 DNNELRD-TD-SLIHLKNLE-ILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT-GGLTRLKKVNWIDLTGQK 183 (263)
T ss_dssp CSSCCSB-SG-GGTTCTTCC-EEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC-TTSTTCCCCCEEEEEEEE
T ss_pred cCCccCC-Ch-hhcCccccc-EEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch-HHhccCCCCCEEeCCCCc
Confidence 9999985 45 588999999 999999999964 4 688999999999999999987 666777777778888886
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=99.63 E-value=1.4e-15 Score=151.32 Aligned_cols=144 Identities=25% Similarity=0.355 Sum_probs=107.8
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|+|++|++++..+ +..+++|++|+|++|.+++ +| .+..+++|++|+|++|++++ ++. +..+++|+.|+|
T Consensus 63 ~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l 136 (308)
T 1h6u_A 63 NNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYL 136 (308)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEEC
Confidence 468888888888875444 8888888888888888875 34 67788888888888888875 343 788888888888
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
++|++++..+ +..+++|+ .|+|++|++++..+ +..+++|+.|+|++|.+++..+ +..+.++..+.+++|.
T Consensus 137 ~~n~l~~~~~--l~~l~~L~-~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~L~~N~ 206 (308)
T 1h6u_A 137 DLNQITNISP--LAGLTNLQ-YLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP-LASLPNLIEVHLKNNQ 206 (308)
T ss_dssp CSSCCCCCGG--GGGCTTCC-EEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECTTSC
T ss_pred CCCccCcCcc--ccCCCCcc-EEEccCCcCCCChh--hcCCCCCCEEECCCCccCcChh-hcCCCCCCEEEccCCc
Confidence 8888874433 77888888 88888888875433 7788888888888888876544 5555666666777665
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=99.63 E-value=1.6e-15 Score=149.55 Aligned_cols=144 Identities=24% Similarity=0.346 Sum_probs=126.5
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|++++|++... + .+..+++|++|+|++|++++. +. +..+++|++|+|++|++++ +| .+..+++|++|+|
T Consensus 46 ~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L 119 (291)
T 1h6t_A 46 NSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDI-KP-LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSL 119 (291)
T ss_dssp HTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEEC
T ss_pred CcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCC-cc-cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEEC
Confidence 4689999999999855 3 489999999999999999974 43 9999999999999999985 44 4999999999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
++|++++ + +.+..+++|+ .|++++|++++. ..+..+++|+.|+|++|.+++..| +..+.++..+.+++|.
T Consensus 120 ~~n~i~~-~-~~l~~l~~L~-~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~L~~N~ 189 (291)
T 1h6t_A 120 EHNGISD-I-NGLVHLPQLE-SLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNH 189 (291)
T ss_dssp TTSCCCC-C-GGGGGCTTCC-EEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSC
T ss_pred CCCcCCC-C-hhhcCCCCCC-EEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh-hcCCCccCEEECCCCc
Confidence 9999995 4 4689999999 999999999965 678999999999999999998776 6777778888888885
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.62 E-value=2.2e-16 Score=157.90 Aligned_cols=132 Identities=21% Similarity=0.175 Sum_probs=73.9
Q ss_pred CCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccC-CCCCCCeeecccCCCCCCchHHhhccccCccE
Q 007935 88 LNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIK-TLKNLTHLDLSSNLLNGSLPEFLLDLRALTGT 166 (584)
Q Consensus 88 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~ 166 (584)
+++|++|+|++|++++..|..+..+++|++|+|++|++++..|..+. .+++|++|+|++|.+++ +|. ...+++|+ .
T Consensus 119 ~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~-~~~l~~L~-~ 195 (317)
T 3o53_A 119 GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD-VKG-QVVFAKLK-T 195 (317)
T ss_dssp CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE-EEC-CCCCTTCC-E
T ss_pred cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcc-ccc-ccccccCC-E
Confidence 44556666666666554455555566666666666666554444442 45666666666666652 232 22355666 6
Q ss_pred EEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCCCCC
Q 007935 167 LNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGLC 223 (584)
Q Consensus 167 l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~l~ 223 (584)
|+|++|++++ +|..+..+++|+.|+|++|.|++.++.+..+.++..+.+.+|+..|
T Consensus 196 L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~~l~~~~~~l~~L~~L~l~~N~~~~ 251 (317)
T 3o53_A 196 LDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHC 251 (317)
T ss_dssp EECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCCBH
T ss_pred EECCCCcCCc-chhhhcccCcccEEECcCCcccchhhHhhcCCCCCEEEccCCCccC
Confidence 6666666663 3334666666666666666666544444444555555666665443
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.62 E-value=4e-16 Score=167.32 Aligned_cols=132 Identities=23% Similarity=0.234 Sum_probs=110.9
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|+|++|++++..|..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|+ .+|.. .+++|++|+|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEec
Confidence 57888999999988877788888999999999999998877888888999999999999888 56765 7888999999
Q ss_pred ccCCCCC-CchHHhhccccCccEEEeccccCccccCccccCCCCC--cEEEeecCCC--ccCCC
Q 007935 145 SSNLLNG-SLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVM--VSLDLRNNNL--SGEIP 203 (584)
Q Consensus 145 s~N~l~~-~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L--~~L~l~~N~l--~~~~p 203 (584)
++|++++ .+|..+.++++|+ .|+|++|++++ ..+..+++| +.|+|++|.+ ++..|
T Consensus 98 ~~N~l~~~~~p~~~~~l~~L~-~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~ 157 (520)
T 2z7x_B 98 SFNAFDALPICKEFGNMSQLK-FLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDP 157 (520)
T ss_dssp CSSCCSSCCCCGGGGGCTTCC-EEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCT
T ss_pred cCCccccccchhhhccCCcce-EEEecCcccch---hhccccccceeeEEEeeccccccccccc
Confidence 9999886 4788888899998 89999998886 356677777 8999999988 66666
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=99.62 E-value=1.1e-15 Score=152.15 Aligned_cols=144 Identities=26% Similarity=0.370 Sum_probs=126.1
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|+|++|++++. +.+..+++|++|+|++|++++ +|. +..+++|++|+|++|++++..+ +..+++|+.|+|
T Consensus 85 ~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l 158 (308)
T 1h6u_A 85 TKITELELSGNPLKNV--SAIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSI 158 (308)
T ss_dssp CSCCEEECCSCCCSCC--GGGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEEC
T ss_pred CCCCEEEccCCcCCCc--hhhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEc
Confidence 5799999999999864 479999999999999999987 553 8999999999999999986543 899999999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
++|++++ ++. +..+++|+ .|+|++|++++..+ +..+++|+.|+|++|.+++..| +..+.++..+.+.+|+
T Consensus 159 ~~n~l~~-~~~-l~~l~~L~-~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~l~~N~ 228 (308)
T 1h6u_A 159 GNAQVSD-LTP-LANLSKLT-TLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP-LANTSNLFIVTLTNQT 228 (308)
T ss_dssp CSSCCCC-CGG-GTTCTTCC-EEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG-GTTCTTCCEEEEEEEE
T ss_pred cCCcCCC-Chh-hcCCCCCC-EEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc-ccCCCCCCEEEccCCe
Confidence 9999995 554 99999999 99999999996544 8899999999999999998765 6667777778888886
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.62 E-value=6.4e-16 Score=167.28 Aligned_cols=132 Identities=24% Similarity=0.224 Sum_probs=66.5
Q ss_pred cCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccC--CCCcccCCCCCCCeeecccCCCCCCchH-Hhhcccc
Q 007935 86 GLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG--PIPDRIKTLKNLTHLDLSSNLLNGSLPE-FLLDLRA 162 (584)
Q Consensus 86 ~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~p~~~~~l~~L~~L~ls~N~l~~~~p~-~~~~l~~ 162 (584)
..+++|++|+|++|.+++.+|..+..+++|++|+|++|++++ .+|..|.++++|+.|+|++|++++.+|. .+..+++
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 344555555555555555555555555555555555555553 2233455555555555555555543443 2444555
Q ss_pred CccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCC
Q 007935 163 LTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 163 L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
|+ .|+|++|++++.+|..+. ++|+.|+|++|+|+..++....+.++..+.+++|.
T Consensus 430 L~-~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~ 484 (562)
T 3a79_B 430 IL-VLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIMSIPKDVTHLQALQELNVASNQ 484 (562)
T ss_dssp CC-EEECCSSCCCGGGGSSCC--TTCSEEECCSSCCCCCCTTTTSSCCCSEEECCSSC
T ss_pred CC-EEECCCCCCCcchhhhhc--CcCCEEECCCCcCcccChhhcCCCCCCEEECCCCC
Confidence 55 555555555544444332 45555555555555333333344444444555543
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.62 E-value=4.9e-16 Score=141.16 Aligned_cols=129 Identities=22% Similarity=0.222 Sum_probs=110.9
Q ss_pred CCEEEEEcCCCCCcccCCccccCCC-CCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeee
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLN-SLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLD 143 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 143 (584)
..++.|+|++|+++. +|. +..+. +|++|+|++|.|++. ..+..+++|++|+|++|+|++..+..|..+++|++|+
T Consensus 19 ~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 94 (176)
T 1a9n_A 19 VRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELI 94 (176)
T ss_dssp TSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEE
T ss_pred CCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEE
Confidence 468999999999995 454 55554 999999999999974 6889999999999999999965445568999999999
Q ss_pred cccCCCCCCchH--HhhccccCccEEEeccccCccccCcc----ccCCCCCcEEEeecCCCcc
Q 007935 144 LSSNLLNGSLPE--FLLDLRALTGTLNLSFNQFSGQIPEM----YGHFPVMVSLDLRNNNLSG 200 (584)
Q Consensus 144 ls~N~l~~~~p~--~~~~l~~L~~~l~l~~N~l~~~~p~~----~~~l~~L~~L~l~~N~l~~ 200 (584)
|++|+|+ .+|. .+..+++|+ .|++++|+++ .+|.. +..+++|+.||+++|.+..
T Consensus 95 L~~N~i~-~~~~~~~l~~l~~L~-~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 95 LTNNSLV-ELGDLDPLASLKSLT-YLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp CCSCCCC-CGGGGGGGGGCTTCC-EEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred CCCCcCC-cchhhHhhhcCCCCC-EEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 9999996 7787 889999999 9999999998 56664 8899999999999998764
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=1.4e-15 Score=164.12 Aligned_cols=155 Identities=23% Similarity=0.264 Sum_probs=134.6
Q ss_pred eEecCCCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCC
Q 007935 60 IHCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNL 139 (584)
Q Consensus 60 v~c~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L 139 (584)
..|....+ .++++++++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|
T Consensus 2 ~~C~~~~~--c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L 76 (549)
T 2z81_A 2 LSCDASGV--CDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSL 76 (549)
T ss_dssp CEECTTSE--EECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred ccCCCCce--EECCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccC
Confidence 35776555 789999998 6676654 799999999999998888999999999999999999998888999999999
Q ss_pred CeeecccCCCCCCchHHhhccccCccEEEeccccCcc-ccCccccCCCCCcEEEeecCCCccCCC--CCCCccccCCccc
Q 007935 140 THLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSG-QIPEMYGHFPVMVSLDLRNNNLSGEIP--QVGSLLNQGPTAF 216 (584)
Q Consensus 140 ~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p--~~~~~~~~~~~~~ 216 (584)
++|||++|++++..|..|.++++|+ .|+|++|++++ .+|..|+++++|+.|++++|.+.+.+| .+..+.++..+.+
T Consensus 77 ~~L~Ls~n~l~~~~~~~~~~l~~L~-~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L 155 (549)
T 2z81_A 77 EHLDLSDNHLSSLSSSWFGPLSSLK-YLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEI 155 (549)
T ss_dssp CEEECTTSCCCSCCHHHHTTCTTCC-EEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEE
T ss_pred CEEECCCCccCccCHHHhccCCCCc-EEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeec
Confidence 9999999999988888899999999 99999999987 467889999999999999999666555 3556666667777
Q ss_pred CCCC
Q 007935 217 SGNP 220 (584)
Q Consensus 217 ~~n~ 220 (584)
.+|.
T Consensus 156 ~~n~ 159 (549)
T 2z81_A 156 KALS 159 (549)
T ss_dssp EETT
T ss_pred cCCc
Confidence 7765
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=99.62 E-value=1.3e-15 Score=164.75 Aligned_cols=144 Identities=28% Similarity=0.353 Sum_probs=123.8
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|+|++|+|++..+ +..+++|+.|+|++|.|++ +| .+..+++|+.|+|++|+|++ + +.+..|++|+.|+|
T Consensus 65 ~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~L 138 (605)
T 1m9s_A 65 PNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYL 138 (605)
T ss_dssp TTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEEC
T ss_pred CCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEEC
Confidence 579999999999997655 8999999999999999986 44 78899999999999999985 3 45889999999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
++|+|++. ..+..+++|+ .|+|++|+|++..| +..+++|+.|+|++|.|++. |.+..+.++..+.+.+|+
T Consensus 139 s~N~l~~l--~~l~~l~~L~-~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l-~~l~~l~~L~~L~L~~N~ 208 (605)
T 1m9s_A 139 GNNKITDI--TVLSRLTKLD-TLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQE 208 (605)
T ss_dssp CSSCCCCC--GGGGSCTTCS-EEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEECCSEE
T ss_pred CCCccCCc--hhhcccCCCC-EEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC-hHHccCCCCCEEEccCCc
Confidence 99999854 6788999999 99999999997766 88999999999999999875 667777777777887775
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.61 E-value=8.9e-17 Score=178.21 Aligned_cols=135 Identities=25% Similarity=0.321 Sum_probs=124.7
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
..++.|+|++|++. .+|..+..+++|++|+|++|.|+ .+|..|.++++|++|+|++|+|+ .+|..|++|++|++|+|
T Consensus 224 ~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L 300 (727)
T 4b8c_D 224 QLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYF 300 (727)
T ss_dssp CCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEEC
T ss_pred CCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEEC
Confidence 57999999999998 78888889999999999999999 79999999999999999999999 88999999999999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCC-CcEEEeecCCCccCCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPV-MVSLDLRNNNLSGEIPQ 204 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~-L~~L~l~~N~l~~~~p~ 204 (584)
++|.|+ .+|..|.++++|+ .|+|++|+|++.+|..+..+.. +..|+|++|.++|.+|.
T Consensus 301 ~~N~l~-~lp~~~~~l~~L~-~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~ 359 (727)
T 4b8c_D 301 FDNMVT-TLPWEFGNLCNLQ-FLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH 359 (727)
T ss_dssp CSSCCC-CCCSSTTSCTTCC-CEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_pred CCCCCC-ccChhhhcCCCcc-EEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc
Confidence 999998 8899999999999 9999999999999998876543 23588999999999984
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=3.1e-16 Score=167.72 Aligned_cols=154 Identities=14% Similarity=0.030 Sum_probs=115.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcc-------hhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCc
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-------WRFKDFESEVEAIARVQHPNIVRLKAFYYANDE 419 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~-------~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~ 419 (584)
.++||+|+||.||+|.... ..+|+|+....... ...++|.+|++++++++|||||++..++...++
T Consensus 341 ~~~LG~G~fg~Vy~~~~~~-------~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~ 413 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSYLD-------FDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDN 413 (540)
T ss_dssp -------CCEEEEEEECSS-------CEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTT
T ss_pred CCEEeeCCCEEEEEEEECC-------CeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCc
Confidence 5689999999999995543 67888886543211 113568999999999999999988888888889
Q ss_pred eeEeeecccCCcHHHHH-----------------hcc--cccccCCCCccccccCeEEecCCCcc---------------
Q 007935 420 KLLISDFIRNGSLYAAL-----------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSR--------------- 465 (584)
Q Consensus 420 ~~lV~Ey~~~GsL~~~L-----------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~--------------- 465 (584)
.++||||+++|+|.+++ |+. -|+|++++|+.+.. .++..|||..
T Consensus 414 ~~lVmE~~~ggsL~~~l~~~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~~~~~ 491 (540)
T 3en9_A 414 KRIMMSYINGKLAKDVIEDNLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAVDLIV 491 (540)
T ss_dssp TEEEEECCCSEEHHHHSTTCTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHHHHHH
T ss_pred cEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEEECccCEECCCccccccchhh
Confidence 99999999999997654 443 46888999987766 7777787643
Q ss_pred ---cccCCCcccCccccccC-CCCCCccchhhHHHHHHHHHhCCCCCC
Q 007935 466 ---ISAISNVYLAPEARIYG-SKFTQKCDVYSFGIVLLEILTGRLPDA 509 (584)
Q Consensus 466 ---~~~gt~~y~aPE~~~~~-~~~~~ksDV~SfGvvl~ElltG~~p~~ 509 (584)
...||+.|||||++... ..|+.++|+||..+-.+|.+.++.+|.
T Consensus 492 ~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 492 FKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred hhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 23689999999985431 357888999999999999999888774
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.60 E-value=1.7e-15 Score=151.47 Aligned_cols=134 Identities=23% Similarity=0.239 Sum_probs=118.6
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCccccc-CCCCCCEEecCCCcccCCCCcccCCCCCCCeee
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLD 143 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 143 (584)
..++.|+|++|++++..+..++.+++|++|+|++|.+++..|..+. .+++|++|+|++|++++. |. ...+++|+.|+
T Consensus 120 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~ 197 (317)
T 3o53_A 120 QGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLD 197 (317)
T ss_dssp SSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEE
T ss_pred CCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEE
Confidence 4588999999999988888999999999999999999987777774 799999999999999855 33 44599999999
Q ss_pred cccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCc-cCCC
Q 007935 144 LSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLS-GEIP 203 (584)
Q Consensus 144 ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~-~~~p 203 (584)
|++|+++ .+|..+..+++|+ .|+|++|+|+ .+|..+..+++|+.|+|++|.++ +.+|
T Consensus 198 Ls~N~l~-~l~~~~~~l~~L~-~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~ 255 (317)
T 3o53_A 198 LSSNKLA-FMGPEFQSAAGVT-WISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLR 255 (317)
T ss_dssp CCSSCCC-EECGGGGGGTTCS-EEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHH
T ss_pred CCCCcCC-cchhhhcccCccc-EEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHH
Confidence 9999999 5666799999999 9999999999 57888999999999999999998 5444
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.60 E-value=2.8e-15 Score=135.21 Aligned_cols=104 Identities=25% Similarity=0.292 Sum_probs=61.3
Q ss_pred EEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccC
Q 007935 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSN 147 (584)
Q Consensus 68 ~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N 147 (584)
+.|++++|+|+. +|..+. ++|+.|+|++|+|++..|..|..+++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 12 ~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 345666666663 454442 56666666666666655666666666666666666666554445566666666666666
Q ss_pred CCCCCchHHhhccccCccEEEeccccCc
Q 007935 148 LLNGSLPEFLLDLRALTGTLNLSFNQFS 175 (584)
Q Consensus 148 ~l~~~~p~~~~~l~~L~~~l~l~~N~l~ 175 (584)
+|++..|..|..+++|+ .|+|++|+++
T Consensus 89 ~l~~~~~~~~~~l~~L~-~L~L~~N~~~ 115 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLT-HIWLLNNPWD 115 (170)
T ss_dssp CCCCCCTTTTTTCTTCC-EEECCSSCBC
T ss_pred ccCEeCHHHhcCCCCCC-EEEeCCCCCC
Confidence 66644444455555555 5555555554
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=1.9e-15 Score=162.42 Aligned_cols=109 Identities=26% Similarity=0.301 Sum_probs=73.4
Q ss_pred CCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEe
Q 007935 90 SLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNL 169 (584)
Q Consensus 90 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l 169 (584)
.|+.|+|++|+|++ +|. |..+++|+.|+|++|+|+ .+|..|+++++|+.|+|++|+|++ +| .+.++++|+ .|+|
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~-~L~L 515 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQ-ELLL 515 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCC-EEEC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCc-EEEC
Confidence 36667777777665 554 666667777777777766 566666677777777777777764 55 666666776 6777
Q ss_pred ccccCcccc-CccccCCCCCcEEEeecCCCccCCCC
Q 007935 170 SFNQFSGQI-PEMYGHFPVMVSLDLRNNNLSGEIPQ 204 (584)
Q Consensus 170 ~~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~p~ 204 (584)
++|+|++.. |..|+.+++|+.|+|++|.|++.+|.
T Consensus 516 s~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 516 CNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp CSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred CCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 777776655 66666777777777777777666553
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.59 E-value=6.5e-15 Score=133.85 Aligned_cols=131 Identities=21% Similarity=0.242 Sum_probs=113.8
Q ss_pred CCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEec
Q 007935 91 LTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLS 170 (584)
Q Consensus 91 L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~ 170 (584)
.+.+++++|+++. +|..+. ++|+.|+|++|++++..+..|..+++|++|+|++|+|++..+..+..+++|+ .|+|+
T Consensus 9 ~~~l~~~~~~l~~-~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~-~L~l~ 84 (177)
T 2o6r_A 9 GTEIRCNSKGLTS-VPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLT-ILYLH 84 (177)
T ss_dssp TTEEECCSSCCSS-CCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCC-EEECC
T ss_pred CCEEEecCCCCcc-CCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccC-EEECC
Confidence 4789999999984 776554 7899999999999977777789999999999999999977677789999999 99999
Q ss_pred cccCccccCccccCCCCCcEEEeecCCCccCCCCC-CCccccCCcccCCCCCCCCC
Q 007935 171 FNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQV-GSLLNQGPTAFSGNPGLCGF 225 (584)
Q Consensus 171 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~~~~~~~~~~~n~~l~~~ 225 (584)
+|+|++..+..|..+++|+.|+|++|.|++.++.. ..+.++..+.+.+|+..|..
T Consensus 85 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 85 ENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred CCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 99999888888999999999999999999877753 45777888889999876654
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=99.59 E-value=3.6e-15 Score=151.10 Aligned_cols=128 Identities=23% Similarity=0.399 Sum_probs=79.2
Q ss_pred ccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCc
Q 007935 85 LGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALT 164 (584)
Q Consensus 85 ~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~ 164 (584)
+..+++|++|+|++|.+++ +|. +..+++|++|+|++|++++. +.+..+++|+.|+|++|.+++ + +.+..+++|+
T Consensus 217 ~~~~~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~ 290 (347)
T 4fmz_A 217 VANMTRLNSLKIGNNKITD-LSP-LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISD-I-SVLNNLSQLN 290 (347)
T ss_dssp GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCC-C-GGGGGCTTCS
T ss_pred hhcCCcCCEEEccCCccCC-Ccc-hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCC-C-hhhcCCCCCC
Confidence 5555666666666666654 232 56666666666666666542 346666666666666666663 3 2466666666
Q ss_pred cEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCC
Q 007935 165 GTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 165 ~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
.|++++|++++..|..|..+++|+.|+|++|.+++.+| +..+.++..+.+.+|+
T Consensus 291 -~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~N~ 344 (347)
T 4fmz_A 291 -SLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP-LASLSKMDSADFANQV 344 (347)
T ss_dssp -EEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG-GGGCTTCSEESSSCC-
T ss_pred -EEECcCCcCCCcChhHhhccccCCEEEccCCccccccC-hhhhhccceeehhhhc
Confidence 67777777766666666667777777777777766655 4455555555666554
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.59 E-value=4.1e-15 Score=134.15 Aligned_cols=110 Identities=23% Similarity=0.238 Sum_probs=99.3
Q ss_pred CCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEec
Q 007935 91 LTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLS 170 (584)
Q Consensus 91 L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~ 170 (584)
.+.|++++|.|+. +|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|+ .|+|+
T Consensus 11 ~~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~-~L~L~ 86 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLT-QLSLN 86 (170)
T ss_dssp TTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCC-EEECC
T ss_pred CCEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCC-EEECC
Confidence 5789999999985 887764 8899999999999988899999999999999999999977777789999999 99999
Q ss_pred cccCccccCccccCCCCCcEEEeecCCCccCCCC
Q 007935 171 FNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ 204 (584)
Q Consensus 171 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 204 (584)
+|+|++..+..|.++++|+.|+|++|.++...+.
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~~ 120 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACSD 120 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCTTBGG
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCCCCchh
Confidence 9999987777899999999999999999977653
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=99.58 E-value=1.1e-17 Score=155.37 Aligned_cols=134 Identities=25% Similarity=0.267 Sum_probs=117.8
Q ss_pred CCEEEEEcCCCCCcccCCc------cccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCC
Q 007935 65 NRVTSLYLPNRNLTGYMPS------ELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKN 138 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~------~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~ 138 (584)
.+++.++++++.+.|..|. .+..+++|++|+|++|.|++ +| .+..+++|++|+|++|+++ .+|..+..+++
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~ 94 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADT 94 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHH
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCc
Confidence 3566677777777777776 89999999999999999997 78 8999999999999999998 78888888899
Q ss_pred CCeeecccCCCCCCchHHhhccccCccEEEeccccCccccC-ccccCCCCCcEEEeecCCCccCCCC
Q 007935 139 LTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIP-EMYGHFPVMVSLDLRNNNLSGEIPQ 204 (584)
Q Consensus 139 L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~ 204 (584)
|+.|+|++|++++ +| .+..+++|+ .|+|++|++++..+ ..+..+++|+.|++++|.+++.+|.
T Consensus 95 L~~L~L~~N~l~~-l~-~~~~l~~L~-~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 95 LEELWISYNQIAS-LS-GIEKLVNLR-VLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp CSEEEEEEEECCC-HH-HHHHHHHSS-EEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred CCEEECcCCcCCc-CC-ccccCCCCC-EEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 9999999999995 66 699999999 99999999995433 5789999999999999999988764
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=99.58 E-value=3.4e-15 Score=151.47 Aligned_cols=165 Identities=14% Similarity=0.054 Sum_probs=124.4
Q ss_pred CCCcceeeEecC-----------CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcc-cccCCCCCCE-Ee
Q 007935 53 TPCHWSGIHCIR-----------NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPA-NLFNATNLVY-LD 119 (584)
Q Consensus 53 ~~c~w~gv~c~~-----------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~-~~~~l~~L~~-L~ 119 (584)
|-|.|..|.|.. .++++|+|++|+|+...+..|.++++|++|+|++|++.+.+|. .|.++++|+. +.
T Consensus 7 C~C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~ 86 (350)
T 4ay9_X 7 CHCSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRI 86 (350)
T ss_dssp SEEETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEE
T ss_pred cEeeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhc
Confidence 568999999964 3689999999999976677899999999999999999877764 5778988775 67
Q ss_pred cCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEecc-ccCccccCccccCCC-CCcEEEeecCC
Q 007935 120 LAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSF-NQFSGQIPEMYGHFP-VMVSLDLRNNN 197 (584)
Q Consensus 120 l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~-N~l~~~~p~~~~~l~-~L~~L~l~~N~ 197 (584)
+++|+++...|..|..+++|++|++++|++++..+..+....++. .|++++ |++....+..|..+. .++.|+|++|.
T Consensus 87 ~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~-~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~ 165 (350)
T 4ay9_X 87 EKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKV-LLDIQDNINIHTIERNSFVGLSFESVILWLNKNG 165 (350)
T ss_dssp EEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCE-EEEEESCTTCCEECTTSSTTSBSSCEEEECCSSC
T ss_pred ccCCcccccCchhhhhccccccccccccccccCCchhhcccchhh-hhhhccccccccccccchhhcchhhhhhcccccc
Confidence 788999987788999999999999999999866665666666666 677654 456644555566654 46777777777
Q ss_pred CccCCCCCCCccccCCcccCC
Q 007935 198 LSGEIPQVGSLLNQGPTAFSG 218 (584)
Q Consensus 198 l~~~~p~~~~~~~~~~~~~~~ 218 (584)
|+...+......++..+.+.+
T Consensus 166 i~~i~~~~f~~~~L~~l~l~~ 186 (350)
T 4ay9_X 166 IQEIHNSAFNGTQLDELNLSD 186 (350)
T ss_dssp CCEECTTSSTTEEEEEEECTT
T ss_pred ccCCChhhccccchhHHhhcc
Confidence 776555444434444444443
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.57 E-value=9e-15 Score=141.86 Aligned_cols=126 Identities=23% Similarity=0.258 Sum_probs=111.7
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|+|++|++++..+ +..+++|++|+|++|++++ +|.. .. ++|++|+|++|++++ ++ .+..+++|+.|+|
T Consensus 63 ~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~-~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~L 135 (263)
T 1xeu_A 63 TNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGI-PS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSI 135 (263)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTC-CC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCcc-cc-CcccEEEccCCccCC-Ch-hhcCcccccEEEC
Confidence 579999999999997654 9999999999999999997 5543 33 999999999999996 44 5999999999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEI 202 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 202 (584)
++|++++ +| .+..+++|+ .|+|++|++++. ..+..+++|+.|++++|.+++..
T Consensus 136 s~N~i~~-~~-~l~~l~~L~-~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~~ 188 (263)
T 1xeu_A 136 RNNKLKS-IV-MLGFLSKLE-VLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNEP 188 (263)
T ss_dssp TTSCCCB-CG-GGGGCTTCC-EEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECCC
T ss_pred CCCcCCC-Ch-HHccCCCCC-EEECCCCcCcch--HHhccCCCCCEEeCCCCcccCCc
Confidence 9999995 55 689999999 999999999976 67899999999999999998764
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.57 E-value=7.8e-15 Score=132.73 Aligned_cols=104 Identities=26% Similarity=0.282 Sum_probs=69.9
Q ss_pred EEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccC
Q 007935 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSN 147 (584)
Q Consensus 68 ~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N 147 (584)
+.+++++|+|+ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 56777888775 5565553 67777777777777766667777777777777777777554445667777777777777
Q ss_pred CCCCCchHHhhccccCccEEEeccccCc
Q 007935 148 LLNGSLPEFLLDLRALTGTLNLSFNQFS 175 (584)
Q Consensus 148 ~l~~~~p~~~~~l~~L~~~l~l~~N~l~ 175 (584)
+|++..+..|..+++|+ .|+|++|++.
T Consensus 92 ~l~~l~~~~~~~l~~L~-~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLT-HIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCS-EEECCSSCBC
T ss_pred ccceeCHHHhccccCCC-EEEeCCCCcc
Confidence 77644444466666666 6666666665
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=99.57 E-value=8.7e-15 Score=154.51 Aligned_cols=144 Identities=31% Similarity=0.379 Sum_probs=95.0
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|+|++|++++. +.+..+++|++|++++|.+++..| +..+++|+.|+|++|++++..+ +..+++|+.|+|
T Consensus 221 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L 294 (466)
T 1o6v_A 221 TNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLEL 294 (466)
T ss_dssp TTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEEC
T ss_pred CCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEc
Confidence 4577777777777653 356677777777777777776433 6677777777777777765433 666777777777
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
++|++++..| +..+++|+ .|+|++|++++..| +..+++|+.|++++|.+++. +.+..+.++..+.+.+|.
T Consensus 295 ~~n~l~~~~~--~~~l~~L~-~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~ 364 (466)
T 1o6v_A 295 NENQLEDISP--ISNLKNLT-YLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV-SSLANLTNINWLSAGHNQ 364 (466)
T ss_dssp CSSCCSCCGG--GGGCTTCS-EEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC-GGGTTCTTCCEEECCSSC
T ss_pred CCCcccCchh--hcCCCCCC-EEECcCCcCCCchh--hccCccCCEeECCCCccCCc-hhhccCCCCCEEeCCCCc
Confidence 7777765433 66677777 77777777776554 56667777777777776654 444555555555666554
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=99.56 E-value=8.1e-15 Score=158.56 Aligned_cols=144 Identities=25% Similarity=0.358 Sum_probs=127.8
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
..++.|+|++|++... + .|..+++|+.|+|++|.|++..| +..+++|+.|+|++|+|++ +| .+..+++|+.|+|
T Consensus 43 ~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~L 116 (605)
T 1m9s_A 43 NSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSL 116 (605)
T ss_dssp TTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEe
Confidence 5689999999999854 4 59999999999999999997544 8999999999999999985 44 7999999999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
++|+|++ +| .+..+++|+ .|+|++|+|++. ..+..+++|+.|+|++|.|++.+| +..+.++..+.+++|.
T Consensus 117 s~N~l~~-l~-~l~~l~~L~-~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~ 186 (605)
T 1m9s_A 117 EHNGISD-IN-GLVHLPQLE-SLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNH 186 (605)
T ss_dssp TTSCCCC-CG-GGGGCTTCS-EEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSC
T ss_pred cCCCCCC-Cc-cccCCCccC-EEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh-hccCCCCCEEECcCCC
Confidence 9999995 44 589999999 999999999965 679999999999999999999877 7778888888888885
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.56 E-value=7.8e-15 Score=156.99 Aligned_cols=114 Identities=29% Similarity=0.384 Sum_probs=81.6
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. +.+ +|++|+|++|+|++ +|. .+++|+.|+|
T Consensus 80 ~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 147 (571)
T 3cvr_A 80 PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINA 147 (571)
T ss_dssp TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEEC
T ss_pred CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeC
Confidence 45788888888887 556 456788888888888876 666 554 77888888888775 555 5677777777
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCc
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLS 199 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 199 (584)
++|+|++ +|. .+++|+ .|+|++|+|++ +|. |. ++|+.|+|++|.|+
T Consensus 148 s~N~l~~-lp~---~l~~L~-~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~ 193 (571)
T 3cvr_A 148 DNNQLTM-LPE---LPTSLE-VLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE 193 (571)
T ss_dssp CSSCCSC-CCC---CCTTCC-EEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS
T ss_pred CCCccCc-CCC---cCCCcC-EEECCCCCCCC-cch-hh--CCCCEEECcCCCCC
Confidence 7777774 555 456677 77777777775 555 54 67777777777777
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=1.2e-14 Score=156.30 Aligned_cols=135 Identities=25% Similarity=0.320 Sum_probs=83.4
Q ss_pred ccCCccccCCCCCCEEE-ccCCCCCCCCcc------cccC--CCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCC
Q 007935 79 GYMPSELGLLNSLTRLS-LASNNFSKPIPA------NLFN--ATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLL 149 (584)
Q Consensus 79 ~~~~~~~~~l~~L~~L~-l~~n~l~~~~p~------~~~~--l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l 149 (584)
+.+|..++.|++|+.|+ ++.|.+.. ++. .+.. ...|+.|+|++|+|++ +|. |+.+++|+.|+|++|+|
T Consensus 399 ~~~~~~l~~l~~L~~L~~l~~n~~~~-L~~l~l~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l 475 (567)
T 1dce_A 399 LYEKETLQYFSTLKAVDPMRAAYLDD-LRSKFLLENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRL 475 (567)
T ss_dssp GGHHHHHHHHHHHHHHCGGGHHHHHH-HHHHHHHHHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCC
T ss_pred cCCHHHHHHHHhcccCcchhhcccch-hhhhhhhcccccccCccCceEEEecCCCCCC-CcC-ccccccCcEeecCcccc
Confidence 33445556666666666 44443321 111 0100 1246777777777764 555 77777777777777777
Q ss_pred CCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCC-C-CCCCccccCCcccCCCC
Q 007935 150 NGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEI-P-QVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 150 ~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~-p-~~~~~~~~~~~~~~~n~ 220 (584)
+ .+|..+.++++|+ .|+|++|+|++ +| .|+++++|+.|+|++|.|++.+ | .+..+.++..+.+++|+
T Consensus 476 ~-~lp~~~~~l~~L~-~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~ 544 (567)
T 1dce_A 476 R-ALPPALAALRCLE-VLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNS 544 (567)
T ss_dssp C-CCCGGGGGCTTCC-EEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSG
T ss_pred c-ccchhhhcCCCCC-EEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCc
Confidence 7 6677777777777 77777777775 55 6777777777777777777763 3 44555566666666665
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.54 E-value=2.2e-14 Score=129.75 Aligned_cols=109 Identities=23% Similarity=0.240 Sum_probs=98.0
Q ss_pred CEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEecc
Q 007935 92 TRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSF 171 (584)
Q Consensus 92 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~ 171 (584)
+.+++++|.++ .+|..+. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|.++++|+ .|+|++
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~-~L~L~~ 90 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLT-QLDLND 90 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC-EEECCS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhh-EEECCC
Confidence 68999999996 5888775 8999999999999988899999999999999999999976666678999999 999999
Q ss_pred ccCccccCccccCCCCCcEEEeecCCCccCCCC
Q 007935 172 NQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ 204 (584)
Q Consensus 172 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 204 (584)
|+|++..+..|..+++|+.|+|++|.++...+.
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~~ 123 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDCECRD 123 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCTTBGG
T ss_pred CccceeCHHHhccccCCCEEEeCCCCccccccc
Confidence 999977777799999999999999999876543
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=99.53 E-value=3.9e-14 Score=149.52 Aligned_cols=144 Identities=35% Similarity=0.465 Sum_probs=123.0
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|++++|++++..| ++.+++|+.|++++|.+++ ++ .+..+++|++|+|++|++++..| +..+++|+.|+|
T Consensus 199 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l 272 (466)
T 1o6v_A 199 TNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD-IG-TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKL 272 (466)
T ss_dssp TTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CG-GGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEEC
T ss_pred CCCCEEEecCCccccccc--ccccCCCCEEECCCCCccc-ch-hhhcCCCCCEEECCCCccccchh--hhcCCCCCEEEC
Confidence 579999999999987655 7889999999999999986 43 68889999999999999987654 889999999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
++|.+++..| +..+++|+ .|+|++|++++..| +..+++|+.|+|++|++++..| +..+.++..+.+.+|.
T Consensus 273 ~~n~l~~~~~--~~~l~~L~-~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~n~ 342 (466)
T 1o6v_A 273 GANQISNISP--LAGLTALT-NLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP-VSSLTKLQRLFFYNNK 342 (466)
T ss_dssp CSSCCCCCGG--GTTCTTCS-EEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG-GGGCTTCCEEECCSSC
T ss_pred CCCccCcccc--ccCCCccC-eEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh-hccCccCCEeECCCCc
Confidence 9999996544 88899999 99999999997554 7889999999999999998776 5667777778888875
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.53 E-value=8.9e-15 Score=132.81 Aligned_cols=132 Identities=15% Similarity=0.101 Sum_probs=107.1
Q ss_pred ccccCCCCCCEEEccCCCCCCCCcccccCCC-CCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccc
Q 007935 83 SELGLLNSLTRLSLASNNFSKPIPANLFNAT-NLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLR 161 (584)
Q Consensus 83 ~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~-~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~ 161 (584)
..+..+.+|+.|+|++|+++. +|. +..+. +|++|+|++|+|++. ..|..+++|++|+|++|+|++..|..+..++
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 88 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALP 88 (176)
T ss_dssp CEEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCT
T ss_pred HhcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCC
Confidence 456788999999999999995 564 55555 999999999999965 6799999999999999999955445669999
Q ss_pred cCccEEEeccccCccccCc--cccCCCCCcEEEeecCCCccCCCC----CCCccccCCcccCCCC
Q 007935 162 ALTGTLNLSFNQFSGQIPE--MYGHFPVMVSLDLRNNNLSGEIPQ----VGSLLNQGPTAFSGNP 220 (584)
Q Consensus 162 ~L~~~l~l~~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~p~----~~~~~~~~~~~~~~n~ 220 (584)
+|+ .|+|++|+|+ .+|. .+..+++|+.|++++|.++...+. +..+.++..+.+.+|.
T Consensus 89 ~L~-~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~ 151 (176)
T 1a9n_A 89 DLT-ELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVK 151 (176)
T ss_dssp TCC-EEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECC
T ss_pred CCC-EEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCC
Confidence 999 9999999997 5666 899999999999999999865432 3444555555555553
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=99.53 E-value=2.8e-14 Score=144.49 Aligned_cols=126 Identities=30% Similarity=0.371 Sum_probs=112.5
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|+|++|++++..+ +..+++|++|++++|.+++ + ..+..+++|++|+|++|++++. +.+..+++|+.|+|
T Consensus 221 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L 294 (347)
T 4fmz_A 221 TRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFL 294 (347)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEEC
T ss_pred CcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEEC
Confidence 579999999999986544 9999999999999999986 4 4789999999999999999864 46899999999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCc
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLS 199 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 199 (584)
++|.+++..|..+..+++|+ .|++++|++++..| +..+++|+.|++++|.|+
T Consensus 295 ~~n~l~~~~~~~l~~l~~L~-~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 295 NNNQLGNEDMEVIGGLTNLT-TLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp CSSCCCGGGHHHHHTCTTCS-EEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred cCCcCCCcChhHhhccccCC-EEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 99999999999999999999 99999999997766 889999999999999986
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.52 E-value=6.1e-14 Score=147.22 Aligned_cols=122 Identities=29% Similarity=0.318 Sum_probs=68.2
Q ss_pred CEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecc
Q 007935 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLS 145 (584)
Q Consensus 66 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls 145 (584)
+++.|+|++|++++. | .++.+++|++|+|++|+|++ +| +..+++|++|+|++|+|++. | ++.+++|++|+|+
T Consensus 43 ~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~ 114 (457)
T 3bz5_A 43 TLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCD 114 (457)
T ss_dssp TCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECC
T ss_pred CCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECC
Confidence 456666666666643 3 45666666666666666655 23 55566666666666666542 2 5556666666666
Q ss_pred cCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCC
Q 007935 146 SNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEI 202 (584)
Q Consensus 146 ~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 202 (584)
+|++++ +| +..+++|+ .|++++|++++. + ++++++|+.|++++|...+.+
T Consensus 115 ~N~l~~-l~--~~~l~~L~-~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~ 164 (457)
T 3bz5_A 115 TNKLTK-LD--VSQNPLLT-YLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL 164 (457)
T ss_dssp SSCCSC-CC--CTTCTTCC-EEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC
T ss_pred CCcCCe-ec--CCCCCcCC-EEECCCCcccee-c--cccCCcCCEEECCCCCccccc
Confidence 666653 33 55556665 666666666542 2 445555555555555443333
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.50 E-value=1.4e-13 Score=144.46 Aligned_cols=138 Identities=24% Similarity=0.258 Sum_probs=89.6
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|+|++|++++. + ++.+++|++|+|++|++++ +| +..+++|++|+|++|++++. + ++.+++|+.|++
T Consensus 85 ~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l 155 (457)
T 3bz5_A 85 TNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDC 155 (457)
T ss_dssp TTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEEC
Confidence 5688889999988874 3 8888888888888888886 44 78888888888888888763 3 566666666666
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGN 219 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n 219 (584)
++|...+.+ .+..+++|+ .|++++|++++ +| ++.+++|+.|++++|.+++. .+..+.++..+.+++|
T Consensus 156 ~~n~~~~~~--~~~~l~~L~-~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~--~l~~l~~L~~L~Ls~N 222 (457)
T 3bz5_A 156 HLNKKITKL--DVTPQTQLT-TLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL--DLNQNIQLTFLDCSSN 222 (457)
T ss_dssp TTCSCCCCC--CCTTCTTCC-EEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC--CCTTCTTCSEEECCSS
T ss_pred CCCCccccc--ccccCCcCC-EEECCCCccce-ec--cccCCCCCEEECcCCcCCee--ccccCCCCCEEECcCC
Confidence 666544444 255555665 66666666654 33 45555555555555555543 1333444444444444
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=99.49 E-value=2e-15 Score=152.25 Aligned_cols=154 Identities=19% Similarity=0.242 Sum_probs=96.3
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCC-CcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeee
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKP-IPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLD 143 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 143 (584)
.+++.|++++|.+.+..+. +..+++|++|+|++|.+++. +|..+..+++|++|+|++|++++..|..+..+++|++|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 4567777777777765544 44667777777777776654 566666777777777777777666666666777777777
Q ss_pred cccC-CCCC-CchHHhhccccCccEEEeccc-cCccc-cCccccCCC-CCcEEEeecC--CCc-cCCCC-CCCccccCCc
Q 007935 144 LSSN-LLNG-SLPEFLLDLRALTGTLNLSFN-QFSGQ-IPEMYGHFP-VMVSLDLRNN--NLS-GEIPQ-VGSLLNQGPT 214 (584)
Q Consensus 144 ls~N-~l~~-~~p~~~~~l~~L~~~l~l~~N-~l~~~-~p~~~~~l~-~L~~L~l~~N--~l~-~~~p~-~~~~~~~~~~ 214 (584)
|++| .+++ .+|..+.++++|+ .|++++| .+++. ++..+..++ +|+.|+|++| .++ +.+|. +..+.++..+
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~-~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L 227 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLD-ELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHL 227 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCC-EEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEE
T ss_pred CCCCCCCCHHHHHHHHhcCCCCC-EEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEE
Confidence 7777 5654 2566666677776 7777777 66643 455566666 6777777766 343 22221 1223344445
Q ss_pred ccCCCC
Q 007935 215 AFSGNP 220 (584)
Q Consensus 215 ~~~~n~ 220 (584)
.+++|.
T Consensus 228 ~l~~~~ 233 (336)
T 2ast_B 228 DLSDSV 233 (336)
T ss_dssp ECTTCT
T ss_pred eCCCCC
Confidence 555554
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=99.48 E-value=2e-13 Score=143.09 Aligned_cols=136 Identities=24% Similarity=0.369 Sum_probs=91.6
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|+|++|++++ +|.. +++|++|++++|++++ +|.. .++|++|+|++|++++ +| .|+++++|++|++
T Consensus 91 ~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l 160 (454)
T 1jl5_A 91 PHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDV 160 (454)
T ss_dssp TTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEEC
Confidence 467888888888886 5543 3677777777777765 3321 1578888888888875 66 4777888888888
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
++|++++ +|..+ .+|+ .|++++|++++ +| .++++++|+.|++++|.+++ +|.. ..++..+.+.+|.
T Consensus 161 ~~N~l~~-lp~~~---~~L~-~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~--~~~L~~L~l~~n~ 226 (454)
T 1jl5_A 161 DNNSLKK-LPDLP---PSLE-FIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDL--PLSLESIVAGNNI 226 (454)
T ss_dssp CSSCCSC-CCCCC---TTCC-EEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCC--CTTCCEEECCSSC
T ss_pred CCCcCcc-cCCCc---cccc-EEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCC--cCcccEEECcCCc
Confidence 8888774 55433 3666 77788887775 55 47777778888888877776 3321 1244445555553
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=99.47 E-value=2.1e-13 Score=143.03 Aligned_cols=137 Identities=27% Similarity=0.355 Sum_probs=73.8
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|++++|++++. |.. .++|++|+|++|++++ +| .+.++++|++|++++|++++ +|..+ .+|++|+|
T Consensus 111 ~~L~~L~l~~n~l~~l-~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L 180 (454)
T 1jl5_A 111 QSLKSLLVDNNNLKAL-SDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAA 180 (454)
T ss_dssp TTCCEEECCSSCCSCC-CSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEEC
T ss_pred CCCcEEECCCCccCcc-cCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEEC
Confidence 3566666666666542 211 1456666666666664 55 46666666666666666653 44332 35666666
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGN 219 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n 219 (584)
++|++++ +| .+.++++|+ .|++++|++++ +|... ++|+.|++++|.++ .+|.+..+.++..+.+++|
T Consensus 181 ~~n~l~~-l~-~~~~l~~L~-~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp~~~~l~~L~~L~l~~N 247 (454)
T 1jl5_A 181 GNNQLEE-LP-ELQNLPFLT-AIYADNNSLKK-LPDLP---LSLESIVAGNNILE-ELPELQNLPFLTTIYADNN 247 (454)
T ss_dssp CSSCCSS-CC-CCTTCTTCC-EEECCSSCCSS-CCCCC---TTCCEEECCSSCCS-SCCCCTTCTTCCEEECCSS
T ss_pred cCCcCCc-Cc-cccCCCCCC-EEECCCCcCCc-CCCCc---CcccEEECcCCcCC-cccccCCCCCCCEEECCCC
Confidence 6666653 44 355566665 66666666553 33221 35555555555555 3444444444444555444
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=99.46 E-value=9.6e-15 Score=147.18 Aligned_cols=155 Identities=23% Similarity=0.266 Sum_probs=130.7
Q ss_pred CCEEEEEcCCCCCccc-CCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCC-cccC-CCCcccCCCCCCCe
Q 007935 65 NRVTSLYLPNRNLTGY-MPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHN-SFCG-PIPDRIKTLKNLTH 141 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~-~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N-~l~~-~~p~~~~~l~~L~~ 141 (584)
.+++.|+|++|++++. ++..+..+++|++|+|++|.+++..|..+..+++|++|+|++| .+++ .++..+.++++|++
T Consensus 93 ~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~ 172 (336)
T 2ast_B 93 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDE 172 (336)
T ss_dssp BCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCE
T ss_pred CCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCE
Confidence 5799999999999876 7888999999999999999999888888999999999999999 6775 36777888999999
Q ss_pred eecccC-CCCCC-chHHhhccc-cCccEEEeccc--cCc-cccCccccCCCCCcEEEeecCC-CccC-CCCCCCccccCC
Q 007935 142 LDLSSN-LLNGS-LPEFLLDLR-ALTGTLNLSFN--QFS-GQIPEMYGHFPVMVSLDLRNNN-LSGE-IPQVGSLLNQGP 213 (584)
Q Consensus 142 L~ls~N-~l~~~-~p~~~~~l~-~L~~~l~l~~N--~l~-~~~p~~~~~l~~L~~L~l~~N~-l~~~-~p~~~~~~~~~~ 213 (584)
|+|++| .+++. ++..+..++ +|+ .|+|++| .++ +.+|..+.++++|+.|+|++|. +++. ++.+..+.++..
T Consensus 173 L~l~~~~~l~~~~~~~~~~~l~~~L~-~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~ 251 (336)
T 2ast_B 173 LNLSWCFDFTEKHVQVAVAHVSETIT-QLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQH 251 (336)
T ss_dssp EECCCCTTCCHHHHHHHHHHSCTTCC-EEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCE
T ss_pred EcCCCCCCcChHHHHHHHHhcccCCC-EEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCE
Confidence 999999 89864 788889999 999 9999999 565 5678888889999999999998 6643 444555666777
Q ss_pred cccCCCC
Q 007935 214 TAFSGNP 220 (584)
Q Consensus 214 ~~~~~n~ 220 (584)
+.+.+|.
T Consensus 252 L~l~~~~ 258 (336)
T 2ast_B 252 LSLSRCY 258 (336)
T ss_dssp EECTTCT
T ss_pred eeCCCCC
Confidence 7777775
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=99.45 E-value=9.5e-15 Score=150.30 Aligned_cols=156 Identities=18% Similarity=0.207 Sum_probs=128.0
Q ss_pred CCEEEEEcCCCCCcc----cCCccccCC---------CCCCEEEccCCCCC-CCCc---ccccCCCCCCEEecCCCccc-
Q 007935 65 NRVTSLYLPNRNLTG----YMPSELGLL---------NSLTRLSLASNNFS-KPIP---ANLFNATNLVYLDLAHNSFC- 126 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~----~~~~~~~~l---------~~L~~L~l~~n~l~-~~~p---~~~~~l~~L~~L~l~~N~l~- 126 (584)
.+++.|+|++|++++ .++..+..+ ++|++|+|++|+|+ +.+| ..+..+++|++|+|++|+++
T Consensus 122 ~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~ 201 (386)
T 2ca6_A 122 TPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRP 201 (386)
T ss_dssp TTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCH
T ss_pred CCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCH
Confidence 679999999999963 356667777 89999999999998 4455 46778999999999999997
Q ss_pred -C---CCCcccCCCCCCCeeecccCCCC----CCchHHhhccccCccEEEeccccCccc----cCccc--cCCCCCcEEE
Q 007935 127 -G---PIPDRIKTLKNLTHLDLSSNLLN----GSLPEFLLDLRALTGTLNLSFNQFSGQ----IPEMY--GHFPVMVSLD 192 (584)
Q Consensus 127 -~---~~p~~~~~l~~L~~L~ls~N~l~----~~~p~~~~~l~~L~~~l~l~~N~l~~~----~p~~~--~~l~~L~~L~ 192 (584)
| .+|..+..+++|+.|+|++|.++ +.+|..+..+++|+ .|+|++|++++. +|..+ +.+++|+.|+
T Consensus 202 ~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~-~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~ 280 (386)
T 2ca6_A 202 EGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLR-ELGLNDCLLSARGAAAVVDAFSKLENIGLQTLR 280 (386)
T ss_dssp HHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCC-EEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEE
T ss_pred hHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcC-EEECCCCCCchhhHHHHHHHHhhccCCCeEEEE
Confidence 3 34557889999999999999996 67899999999999 999999999876 56777 4489999999
Q ss_pred eecCCCcc----CCCC-C-CCccccCCcccCCCCC
Q 007935 193 LRNNNLSG----EIPQ-V-GSLLNQGPTAFSGNPG 221 (584)
Q Consensus 193 l~~N~l~~----~~p~-~-~~~~~~~~~~~~~n~~ 221 (584)
|++|.+++ .+|. + ..+.++..+.+.+|+.
T Consensus 281 L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l 315 (386)
T 2ca6_A 281 LQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRF 315 (386)
T ss_dssp CCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBS
T ss_pred CcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcC
Confidence 99999998 3553 2 2246677778888863
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.45 E-value=8.6e-14 Score=140.91 Aligned_cols=108 Identities=24% Similarity=0.251 Sum_probs=83.6
Q ss_pred CCcceeeEecCCCEEEEEcCCC-CCcccCCccccCCCCCCEEEccC-CCCCCCCcccccCCCCCCEEecCCCcccCCCCc
Q 007935 54 PCHWSGIHCIRNRVTSLYLPNR-NLTGYMPSELGLLNSLTRLSLAS-NNFSKPIPANLFNATNLVYLDLAHNSFCGPIPD 131 (584)
Q Consensus 54 ~c~w~gv~c~~~~v~~l~l~~~-~l~~~~~~~~~~l~~L~~L~l~~-n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 131 (584)
.|.|..|.|. ++ +|++ +|. |..+++|+.|+|++ |+|++..|..|.++++|++|+|++|+|++..|.
T Consensus 7 ~C~~~~v~~~----------~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 74 (347)
T 2ifg_A 7 PHGSSGLRCT----------RDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPD 74 (347)
T ss_dssp CSSSSCEECC----------SSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTT
T ss_pred cccCCEEEcC----------CCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHH
Confidence 5888776664 34 6763 677 88888999999986 888877777888888888898888888888888
Q ss_pred ccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCc
Q 007935 132 RIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFS 175 (584)
Q Consensus 132 ~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~ 175 (584)
.|.+|++|+.|||++|+|++..|..+..++ |+ .|+|++|+|.
T Consensus 75 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~-~l~l~~N~~~ 116 (347)
T 2ifg_A 75 AFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQ-ELVLSGNPLH 116 (347)
T ss_dssp GGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CC-EEECCSSCCC
T ss_pred HhcCCcCCCEEeCCCCccceeCHHHcccCC-ce-EEEeeCCCcc
Confidence 888888888888888888854444444444 77 7777777776
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=99.43 E-value=1.2e-14 Score=149.54 Aligned_cols=113 Identities=24% Similarity=0.271 Sum_probs=54.3
Q ss_pred cCCCCCCEEEccCCCCCC----CCcccccCCCCCCEEecCCCcccCCCCcc----cCCC---------CCCCeeecccCC
Q 007935 86 GLLNSLTRLSLASNNFSK----PIPANLFNATNLVYLDLAHNSFCGPIPDR----IKTL---------KNLTHLDLSSNL 148 (584)
Q Consensus 86 ~~l~~L~~L~l~~n~l~~----~~p~~~~~l~~L~~L~l~~N~l~~~~p~~----~~~l---------~~L~~L~ls~N~ 148 (584)
..+++|++|+|++|.|++ .+|..+..+++|++|+|++|.+++..+.. +..+ ++|++|+|++|+
T Consensus 91 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~ 170 (386)
T 2ca6_A 91 LKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNR 170 (386)
T ss_dssp TTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSC
T ss_pred hhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCC
Confidence 445555555555555554 24444455555555555555554222222 2222 455555555555
Q ss_pred CC-CCch---HHhhccccCccEEEeccccCc--c---ccCccccCCCCCcEEEeecCCCc
Q 007935 149 LN-GSLP---EFLLDLRALTGTLNLSFNQFS--G---QIPEMYGHFPVMVSLDLRNNNLS 199 (584)
Q Consensus 149 l~-~~~p---~~~~~l~~L~~~l~l~~N~l~--~---~~p~~~~~l~~L~~L~l~~N~l~ 199 (584)
++ +.+| ..+..+++|+ .|+|++|+++ | ..|..+..+++|+.|+|++|.++
T Consensus 171 l~~~~~~~l~~~l~~~~~L~-~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~ 229 (386)
T 2ca6_A 171 LENGSMKEWAKTFQSHRLLH-TVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFT 229 (386)
T ss_dssp CTGGGHHHHHHHHHHCTTCC-EEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCH
T ss_pred CCcHHHHHHHHHHHhCCCcC-EEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCC
Confidence 54 3333 2444455555 5555555554 2 23334455555555555555553
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.43 E-value=1.3e-13 Score=149.33 Aligned_cols=136 Identities=26% Similarity=0.394 Sum_probs=100.6
Q ss_pred CCCCCCCCCCCcceee--------EecCCCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCC
Q 007935 45 DSWSESDSTPCHWSGI--------HCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLV 116 (584)
Q Consensus 45 ~~w~~~~~~~c~w~gv--------~c~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~ 116 (584)
..|... ..||.|.|. .|....++.|++++|+|+ .+|..+. ++|+.|+|++|+|+. +|. .+++|+
T Consensus 13 ~~W~~~-~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~-lp~---~l~~L~ 84 (622)
T 3g06_A 13 SAWRRA-APAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPA---LPPELR 84 (622)
T ss_dssp HHHHHT-CCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSC-CCC---CCTTCC
T ss_pred HHHHhc-CCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCCC-CCC---cCCCCC
Confidence 356433 456888664 333456889999999998 6777665 789999999999984 675 578899
Q ss_pred EEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecC
Q 007935 117 YLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNN 196 (584)
Q Consensus 117 ~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N 196 (584)
+|+|++|+|+ .+|. .+++|++|+|++|.|+ .+|. .+++|+ .|++++|+|++ +|.. +++|+.|+|++|
T Consensus 85 ~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~l~~---~l~~L~-~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N 151 (622)
T 3g06_A 85 TLEVSGNQLT-SLPV---LPPGLLELSIFSNPLT-HLPA---LPSGLC-KLWIFGNQLTS-LPVL---PPGLQELSVSDN 151 (622)
T ss_dssp EEEECSCCCS-CCCC---CCTTCCEEEECSCCCC-CCCC---CCTTCC-EEECCSSCCSC-CCCC---CTTCCEEECCSS
T ss_pred EEEcCCCcCC-cCCC---CCCCCCEEECcCCcCC-CCCC---CCCCcC-EEECCCCCCCc-CCCC---CCCCCEEECcCC
Confidence 9999999988 4665 6788888888888888 4555 556777 78888888774 5543 367777788777
Q ss_pred CCccC
Q 007935 197 NLSGE 201 (584)
Q Consensus 197 ~l~~~ 201 (584)
.+++.
T Consensus 152 ~l~~l 156 (622)
T 3g06_A 152 QLASL 156 (622)
T ss_dssp CCSCC
T ss_pred cCCCc
Confidence 77764
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.43 E-value=1.8e-14 Score=146.74 Aligned_cols=137 Identities=26% Similarity=0.284 Sum_probs=84.7
Q ss_pred CEEEEEcCCCCCcccCC----ccccCCC-CCCEEEccCCCCCCCCcccccCC-----CCCCEEecCCCcccCCCCccc--
Q 007935 66 RVTSLYLPNRNLTGYMP----SELGLLN-SLTRLSLASNNFSKPIPANLFNA-----TNLVYLDLAHNSFCGPIPDRI-- 133 (584)
Q Consensus 66 ~v~~l~l~~~~l~~~~~----~~~~~l~-~L~~L~l~~n~l~~~~p~~~~~l-----~~L~~L~l~~N~l~~~~p~~~-- 133 (584)
.++.|+|++|++++..+ ..|..++ +|++|+|++|.|++..+..+..+ ++|++|+|++|++++..+..+
T Consensus 23 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~ 102 (362)
T 3goz_A 23 GVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVK 102 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH
T ss_pred CceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHH
Confidence 46777777777766555 5566666 67777777777766555555554 677777777777765555433
Q ss_pred --CCC-CCCCeeecccCCCCCCchHHhhc-----cccCccEEEeccccCccc----cCccccCCC-CCcEEEeecCCCcc
Q 007935 134 --KTL-KNLTHLDLSSNLLNGSLPEFLLD-----LRALTGTLNLSFNQFSGQ----IPEMYGHFP-VMVSLDLRNNNLSG 200 (584)
Q Consensus 134 --~~l-~~L~~L~ls~N~l~~~~p~~~~~-----l~~L~~~l~l~~N~l~~~----~p~~~~~l~-~L~~L~l~~N~l~~ 200 (584)
..+ ++|+.|+|++|++++..+..+.. .++|+ .|+|++|++++. ++..+..++ +|+.|+|++|.+++
T Consensus 103 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~-~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~ 181 (362)
T 3goz_A 103 TLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASIT-SLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLAS 181 (362)
T ss_dssp HHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCC-EEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGG
T ss_pred HHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCcee-EEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCch
Confidence 333 66777777777776555544433 24666 777777777642 333334444 67777777777765
Q ss_pred CCC
Q 007935 201 EIP 203 (584)
Q Consensus 201 ~~p 203 (584)
..+
T Consensus 182 ~~~ 184 (362)
T 3goz_A 182 KNC 184 (362)
T ss_dssp SCH
T ss_pred hhH
Confidence 443
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.42 E-value=2.7e-13 Score=137.24 Aligned_cols=106 Identities=21% Similarity=0.194 Sum_probs=96.4
Q ss_pred CEEEccCC-CCCCCCcccccCCCCCCEEecCC-CcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEe
Q 007935 92 TRLSLASN-NFSKPIPANLFNATNLVYLDLAH-NSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNL 169 (584)
Q Consensus 92 ~~L~l~~n-~l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l 169 (584)
..++++++ +|++ +|. |..+++|+.|+|++ |+|++..|..|.+|++|+.|+|++|+|++..|..|.+|++|+ .|+|
T Consensus 11 ~~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~-~L~l 87 (347)
T 2ifg_A 11 SGLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLS-RLNL 87 (347)
T ss_dssp SCEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCC-EEEC
T ss_pred CEEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCC-EEeC
Confidence 35799998 8985 898 99999999999996 999988888999999999999999999998889999999999 9999
Q ss_pred ccccCccccCccccCCCCCcEEEeecCCCccC
Q 007935 170 SFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGE 201 (584)
Q Consensus 170 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 201 (584)
++|+|++..+..|..++ |+.|+|++|.|...
T Consensus 88 ~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 88 SFNALESLSWKTVQGLS-LQELVLSGNPLHCS 118 (347)
T ss_dssp CSSCCSCCCSTTTCSCC-CCEEECCSSCCCCC
T ss_pred CCCccceeCHHHcccCC-ceEEEeeCCCccCC
Confidence 99999977777777776 99999999999864
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.38 E-value=1.5e-12 Score=140.96 Aligned_cols=55 Identities=24% Similarity=0.296 Sum_probs=23.2
Q ss_pred ccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCC
Q 007935 161 RALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 161 ~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
++|+ .|+|++|+|+ .+|. .+++|+.|+|++|+|+..++.+..+.++..+.+++|+
T Consensus 241 ~~L~-~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~~lp~~l~~l~~L~~L~L~~N~ 295 (622)
T 3g06_A 241 SELK-ELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLTRLPESLIHLSSETTVNLEGNP 295 (622)
T ss_dssp TTCC-EEECCSSCCS-CCCC---CCTTCCEEECCSSCCCSCCGGGGGSCTTCEEECCSCC
T ss_pred CcCc-EEECCCCCCC-cCCc---ccccCcEEeCCCCCCCcCCHHHhhccccCEEEecCCC
Confidence 3444 4444444444 2332 3344455555555555222223333334444444444
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.38 E-value=8.5e-14 Score=141.79 Aligned_cols=151 Identities=23% Similarity=0.294 Sum_probs=121.7
Q ss_pred EEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCc----ccccCCC-CCCEEecCCCcccCCCCcccCCC-----CC
Q 007935 69 SLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIP----ANLFNAT-NLVYLDLAHNSFCGPIPDRIKTL-----KN 138 (584)
Q Consensus 69 ~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p----~~~~~l~-~L~~L~l~~N~l~~~~p~~~~~l-----~~ 138 (584)
.+.|++|+++|.+|..+...++|++|+|++|.|++..+ ..+..++ +|++|+|++|+|++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 36789999999999988888889999999999998666 6778898 99999999999998877777765 99
Q ss_pred CCeeecccCCCCCCchHHhhcc-----ccCccEEEeccccCccccCcccc----C-CCCCcEEEeecCCCccCCCC----
Q 007935 139 LTHLDLSSNLLNGSLPEFLLDL-----RALTGTLNLSFNQFSGQIPEMYG----H-FPVMVSLDLRNNNLSGEIPQ---- 204 (584)
Q Consensus 139 L~~L~ls~N~l~~~~p~~~~~l-----~~L~~~l~l~~N~l~~~~p~~~~----~-l~~L~~L~l~~N~l~~~~p~---- 204 (584)
|++|+|++|.+++..+..+... ++|+ .|+|++|++++..+..+. . .++|++|+|++|.++...+.
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~-~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~ 160 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTIT-VLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQ 160 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCC-EEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCcc-EEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHH
Confidence 9999999999998888766654 8999 999999999977665544 3 36999999999999853321
Q ss_pred -CCCc-cccCCcccCCCC
Q 007935 205 -VGSL-LNQGPTAFSGNP 220 (584)
Q Consensus 205 -~~~~-~~~~~~~~~~n~ 220 (584)
+... .++..+.+++|.
T Consensus 161 ~l~~~~~~L~~L~Ls~n~ 178 (362)
T 3goz_A 161 ILAAIPANVNSLNLRGNN 178 (362)
T ss_dssp HHHTSCTTCCEEECTTSC
T ss_pred HHhcCCccccEeeecCCC
Confidence 0111 245556666664
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=99.38 E-value=4.7e-15 Score=137.42 Aligned_cols=130 Identities=20% Similarity=0.240 Sum_probs=113.0
Q ss_pred ccCCCCCCEEEccCCCCCCCCcc------cccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhh
Q 007935 85 LGLLNSLTRLSLASNNFSKPIPA------NLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLL 158 (584)
Q Consensus 85 ~~~l~~L~~L~l~~n~l~~~~p~------~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~ 158 (584)
+.....++.++++.|.++|.+|. .+..+++|++|+|++|++++ +| .+..+++|+.|+|++|.++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 45667888889999999988887 89999999999999999996 77 8999999999999999999 8899899
Q ss_pred ccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCC--CCCCCccccCCcccCCCC
Q 007935 159 DLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEI--PQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 159 ~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~--p~~~~~~~~~~~~~~~n~ 220 (584)
.+++|+ .|+|++|++++ +| .+..+++|+.|+|++|.+++.. +.+..+.++..+.+.+|+
T Consensus 91 ~~~~L~-~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~ 151 (198)
T 1ds9_A 91 VADTLE-ELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNP 151 (198)
T ss_dssp HHHHCS-EEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCH
T ss_pred cCCcCC-EEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCc
Confidence 999999 99999999996 55 6889999999999999999643 245566677777888886
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=1.2e-12 Score=128.16 Aligned_cols=134 Identities=15% Similarity=0.158 Sum_probs=100.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcc-----------------hhhHhHHHHHHHHHhcCCCceee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-----------------WRFKDFESEVEAIARVQHPNIVR 409 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~-----------------~~~~~f~~Ei~~l~~l~HpnIV~ 409 (584)
.+.||+|+||.||+|....+ +.||||.++..... .....|.+|++++++++ | ++
T Consensus 95 ~~~iG~G~~g~Vy~~~~~~g------~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~ 165 (282)
T 1zar_A 95 GKLMGEGKESAVFNCYSEKF------GECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LA 165 (282)
T ss_dssp EEEEEECSSEEEEEEEETTT------EEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SS
T ss_pred cCEeccCCCceEEEEEeCCC------CEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CC
Confidence 47899999999999999434 89999999753211 12467999999999999 5 77
Q ss_pred eeEEEEeCCceeEeeecccCCcHH------------------HHHhccc--ccccCCCCccccccCeEEecCCCcccccC
Q 007935 410 LKAFYYANDEKLLISDFIRNGSLY------------------AALHGFG--LNRLLPGTSKVTKNETIVTSGTGSRISAI 469 (584)
Q Consensus 410 l~g~~~~~~~~~lV~Ey~~~GsL~------------------~~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~~~g 469 (584)
+.+++. .+..++||||+++|+|. .+||+.| |+|+++.|+.+. ++.++..|||... .
T Consensus 166 v~~~~~-~~~~~lvmE~~~g~~L~~l~~~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~vkl~DFG~a~--~ 241 (282)
T 1zar_A 166 VPKVYA-WEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWIIDFPQSV--E 241 (282)
T ss_dssp SCCEEE-EETTEEEEECCCCEEGGGCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEEECCCTTCE--E
T ss_pred cCeEEe-ccceEEEEEecCCCcHHHcchhhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEEEEECCCCe--E
Confidence 777554 46679999999999984 3456554 788999999988 8888999998764 4
Q ss_pred CCcccCccccccC---------CCCCCccchhh
Q 007935 470 SNVYLAPEARIYG---------SKFTQKCDVYS 493 (584)
Q Consensus 470 t~~y~aPE~~~~~---------~~~~~ksDV~S 493 (584)
+..|+|||++... ..|..++|+|.
T Consensus 242 ~~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~ 274 (282)
T 1zar_A 242 VGEEGWREILERDVRNIITYFSRTYRTEKDINS 274 (282)
T ss_dssp TTSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCCCChHH
Confidence 4568999985321 23555666654
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=99.31 E-value=3.1e-12 Score=129.55 Aligned_cols=136 Identities=16% Similarity=0.110 Sum_probs=88.1
Q ss_pred CCEEEEEcCCCCCcccCC-ccccCCCCCCE-EEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCC----
Q 007935 65 NRVTSLYLPNRNLTGYMP-SELGLLNSLTR-LSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKN---- 138 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~-~~~~~l~~L~~-L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~---- 138 (584)
.+++.|+|++|++.+.+| ..|.++++|+. +.+++|+|+...|..|..+++|++|++++|++++..+..+....+
T Consensus 54 ~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l 133 (350)
T 4ay9_X 54 GDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLL 133 (350)
T ss_dssp TTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEE
T ss_pred CCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhh
Confidence 579999999999877665 46788888775 667779998877888899999999999999988655444433333
Q ss_pred ----------------------CCeeecccCCCCCCchHHhhccccCccEEEecc-ccCccccCccccCCCCCcEEEeec
Q 007935 139 ----------------------LTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSF-NQFSGQIPEMYGHFPVMVSLDLRN 195 (584)
Q Consensus 139 ----------------------L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~-N~l~~~~p~~~~~l~~L~~L~l~~ 195 (584)
|+.|+|++|+|+ .+|.......+|+ .+++++ |+++...++.|.++++|+.|+|++
T Consensus 134 ~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~-~i~~~~f~~~~L~-~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~ 211 (350)
T 4ay9_X 134 DIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNGTQLD-ELNLSDNNNLEELPNDVFHGASGPVILDISR 211 (350)
T ss_dssp EEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-EECTTSSTTEEEE-EEECTTCTTCCCCCTTTTTTEECCSEEECTT
T ss_pred hhccccccccccccchhhcchhhhhhcccccccc-CCChhhccccchh-HHhhccCCcccCCCHHHhccCcccchhhcCC
Confidence 444555555555 4444444444555 555543 344433333455555555555555
Q ss_pred CCCccCC
Q 007935 196 NNLSGEI 202 (584)
Q Consensus 196 N~l~~~~ 202 (584)
|+|+..+
T Consensus 212 N~l~~lp 218 (350)
T 4ay9_X 212 TRIHSLP 218 (350)
T ss_dssp SCCCCCC
T ss_pred CCcCccC
Confidence 5555443
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=99.26 E-value=2.3e-13 Score=143.28 Aligned_cols=155 Identities=18% Similarity=0.083 Sum_probs=114.1
Q ss_pred CCEEEEEcCCCCCcccC-----CccccCCCCCCEEEccCCCCCCC----CcccccCCCCCCEEecCCCcccCCCCcccC-
Q 007935 65 NRVTSLYLPNRNLTGYM-----PSELGLLNSLTRLSLASNNFSKP----IPANLFNATNLVYLDLAHNSFCGPIPDRIK- 134 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~-----~~~~~~l~~L~~L~l~~n~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~- 134 (584)
.+++.|+|++|++++.. +..+..+++|++|+|++|.++.. ++..+..+++|++|+|++|.+++..+..+.
T Consensus 227 ~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 306 (461)
T 1z7x_W 227 ASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCE 306 (461)
T ss_dssp TTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHH
T ss_pred CCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHH
Confidence 57899999999887542 22334688999999999998864 567777889999999999988754333332
Q ss_pred ----CCCCCCeeecccCCCCCC----chHHhhccccCccEEEeccccCccccCccccC-----CCCCcEEEeecCCCcc-
Q 007935 135 ----TLKNLTHLDLSSNLLNGS----LPEFLLDLRALTGTLNLSFNQFSGQIPEMYGH-----FPVMVSLDLRNNNLSG- 200 (584)
Q Consensus 135 ----~l~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~-----l~~L~~L~l~~N~l~~- 200 (584)
..++|+.|+|++|.+++. +|..+..+++|+ .|+|++|++++..+..+.. .++|+.|+|++|.+++
T Consensus 307 ~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~-~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~ 385 (461)
T 1z7x_W 307 TLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLL-ELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDS 385 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCC-EEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHH
T ss_pred HhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCcc-EEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChh
Confidence 236899999999998865 577778888998 9999999888665554443 6789999999998885
Q ss_pred ---CCC-CCCCccccCCcccCCCC
Q 007935 201 ---EIP-QVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 201 ---~~p-~~~~~~~~~~~~~~~n~ 220 (584)
.+| .+....++..+.+++|+
T Consensus 386 ~~~~l~~~l~~~~~L~~L~l~~N~ 409 (461)
T 1z7x_W 386 SCSSLAATLLANHSLRELDLSNNC 409 (461)
T ss_dssp HHHHHHHHHHHCCCCCEEECCSSS
T ss_pred hHHHHHHHHHhCCCccEEECCCCC
Confidence 444 22234556667777775
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=99.20 E-value=4.3e-13 Score=141.27 Aligned_cols=155 Identities=17% Similarity=0.155 Sum_probs=122.5
Q ss_pred CCEEEEEcCCCCCccc----CCccccCCCCCCEEEccCCCCCCCC-----cccccCCCCCCEEecCCCcccCC----CCc
Q 007935 65 NRVTSLYLPNRNLTGY----MPSELGLLNSLTRLSLASNNFSKPI-----PANLFNATNLVYLDLAHNSFCGP----IPD 131 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~~-----p~~~~~l~~L~~L~l~~N~l~~~----~p~ 131 (584)
.+++.|+|++|++++. ++..+..+++|++|+|++|.++... +..+..+++|++|+|++|++++. ++.
T Consensus 199 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~ 278 (461)
T 1z7x_W 199 CQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCR 278 (461)
T ss_dssp CCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHH
T ss_pred CCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHH
Confidence 3799999999999874 5778889999999999999987532 22234689999999999999864 677
Q ss_pred ccCCCCCCCeeecccCCCCCCchHHhhcc-----ccCccEEEeccccCccc----cCccccCCCCCcEEEeecCCCccCC
Q 007935 132 RIKTLKNLTHLDLSSNLLNGSLPEFLLDL-----RALTGTLNLSFNQFSGQ----IPEMYGHFPVMVSLDLRNNNLSGEI 202 (584)
Q Consensus 132 ~~~~l~~L~~L~ls~N~l~~~~p~~~~~l-----~~L~~~l~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~ 202 (584)
.+..+++|+.|+|++|.+++..+..+... ++|+ .|+|++|.+++. ++..+..+++|+.|+|++|.+++..
T Consensus 279 ~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~-~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~ 357 (461)
T 1z7x_W 279 VLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLE-SLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAG 357 (461)
T ss_dssp HHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCC-EEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHH
T ss_pred HHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccce-eeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCcccccc
Confidence 78889999999999999986655555544 6899 999999999865 5777788899999999999998653
Q ss_pred CC-CC-----CccccCCcccCCCC
Q 007935 203 PQ-VG-----SLLNQGPTAFSGNP 220 (584)
Q Consensus 203 p~-~~-----~~~~~~~~~~~~n~ 220 (584)
+. +. ...++..+.+++|.
T Consensus 358 ~~~l~~~l~~~~~~L~~L~L~~n~ 381 (461)
T 1z7x_W 358 VRELCQGLGQPGSVLRVLWLADCD 381 (461)
T ss_dssp HHHHHHHHTSTTCCCCEEECTTSC
T ss_pred HHHHHHHHcCCCCceEEEECCCCC
Confidence 21 11 12355666777774
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.10 E-value=5.1e-12 Score=128.54 Aligned_cols=135 Identities=19% Similarity=0.143 Sum_probs=75.3
Q ss_pred CCEEEEEcCCCCCcccCCccccC-----CCCCCEEEccCCCCCCCCcccc-cCCCCCCEEecCCCcccCCCCccc-----
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGL-----LNSLTRLSLASNNFSKPIPANL-FNATNLVYLDLAHNSFCGPIPDRI----- 133 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~-----l~~L~~L~l~~n~l~~~~p~~~-~~l~~L~~L~l~~N~l~~~~p~~~----- 133 (584)
..++.|+|++|+++......|.. .++|++|+|++|.|+......+ ..+++|+.|+|++|+|+..-...+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 35667777777766433322222 2567777777776653222222 234566677777776653322222
Q ss_pred CCCCCCCeeecccCCCCC----CchHHhhccccCccEEEeccccCccc----cCccccCCCCCcEEEeecCCCcc
Q 007935 134 KTLKNLTHLDLSSNLLNG----SLPEFLLDLRALTGTLNLSFNQFSGQ----IPEMYGHFPVMVSLDLRNNNLSG 200 (584)
Q Consensus 134 ~~l~~L~~L~ls~N~l~~----~~p~~~~~l~~L~~~l~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~ 200 (584)
....+|+.|+|++|.|+. .++..+..+++|+ .|+|++|+|+.. ++..+...++|+.|+|++|.|+.
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~-~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~ 225 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVT-HLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGD 225 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCC-EEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcC-EEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCH
Confidence 234567777777776653 2344445566666 677777766532 24455556667777777776654
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.01 E-value=1.2e-11 Score=125.72 Aligned_cols=136 Identities=21% Similarity=0.253 Sum_probs=106.9
Q ss_pred CCEEEEEcCCCCCcccCCccc-cCCCCCCEEEccCCCCCCCCcccc-----cCCCCCCEEecCCCcccC----CCCcccC
Q 007935 65 NRVTSLYLPNRNLTGYMPSEL-GLLNSLTRLSLASNNFSKPIPANL-----FNATNLVYLDLAHNSFCG----PIPDRIK 134 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~-~~l~~L~~L~l~~n~l~~~~p~~~-----~~l~~L~~L~l~~N~l~~----~~p~~~~ 134 (584)
..++.|+|++|+++..-...+ ..+++|+.|+|++|+|+..-...+ ...++|++|+|++|.|+. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 479999999999975433222 346789999999999975433333 356889999999999974 3455567
Q ss_pred CCCCCCeeecccCCCCCC----chHHhhccccCccEEEeccccCccc----cCccccCCCCCcEEEeecCCCccC
Q 007935 135 TLKNLTHLDLSSNLLNGS----LPEFLLDLRALTGTLNLSFNQFSGQ----IPEMYGHFPVMVSLDLRNNNLSGE 201 (584)
Q Consensus 135 ~l~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~~l~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~ 201 (584)
.+++|++|||++|.|+.. ++..+...++|+ .|+|++|.|+.. +...+...++|++|+|++|.|+..
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~-~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQ-ELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCC-EEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcC-eEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHH
Confidence 889999999999999742 356677888999 999999999853 445566678999999999998753
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=98.94 E-value=4.8e-12 Score=121.22 Aligned_cols=145 Identities=17% Similarity=0.163 Sum_probs=80.2
Q ss_pred CCcceeeEecCC--CEEEEEcCC---CCCcccCC-ccccCCCCCCEEEccCCCCCCCCcc-cccCCCCCCE--EecCCCc
Q 007935 54 PCHWSGIHCIRN--RVTSLYLPN---RNLTGYMP-SELGLLNSLTRLSLASNNFSKPIPA-NLFNATNLVY--LDLAHNS 124 (584)
Q Consensus 54 ~c~w~gv~c~~~--~v~~l~l~~---~~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~p~-~~~~l~~L~~--L~l~~N~ 124 (584)
.|.|.|+.|... +|..+...+ ..+.+.++ ..+..++. .|...+|..++.++- .+...+.|.. ++++.|+
T Consensus 77 l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~ 154 (267)
T 3rw6_A 77 LKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNR 154 (267)
T ss_dssp HHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTS
T ss_pred HHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCCH
Confidence 489999999864 565555443 22333332 22222221 222233333332221 1333444444 5666664
Q ss_pred cc---CCCCcccCCCCCCCeeecccCCCCC--CchHHhhccccCccEEEeccccCccccCccccCCC--CCcEEEeecCC
Q 007935 125 FC---GPIPDRIKTLKNLTHLDLSSNLLNG--SLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFP--VMVSLDLRNNN 197 (584)
Q Consensus 125 l~---~~~p~~~~~l~~L~~L~ls~N~l~~--~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~--~L~~L~l~~N~ 197 (584)
.. +.++....++++|+.|+|++|+|++ .+|..+..+++|+ .|+|++|+|++. +.+..+. +|++|+|++|.
T Consensus 155 ~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~-~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Np 231 (267)
T 3rw6_A 155 RSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLK-ILNLSGNELKSE--RELDKIKGLKLEELWLDGNS 231 (267)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCC-EEECTTSCCCSG--GGGGGGTTSCCSEEECTTST
T ss_pred HHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCC-EEECCCCccCCc--hhhhhcccCCcceEEccCCc
Confidence 32 2222222456777777777777776 4556667777777 777777777754 2334444 77777777777
Q ss_pred CccCCC
Q 007935 198 LSGEIP 203 (584)
Q Consensus 198 l~~~~p 203 (584)
+++.+|
T Consensus 232 l~~~~~ 237 (267)
T 3rw6_A 232 LCDTFR 237 (267)
T ss_dssp TGGGCS
T ss_pred CccccC
Confidence 777655
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=98.87 E-value=1.5e-10 Score=125.90 Aligned_cols=155 Identities=12% Similarity=0.076 Sum_probs=86.8
Q ss_pred CCEEEEEcCC-----------CCCccc-CCccccCCCCCCEEEccCCCCCCCCcccccC-CCCCCEEecC----CCcccC
Q 007935 65 NRVTSLYLPN-----------RNLTGY-MPSELGLLNSLTRLSLASNNFSKPIPANLFN-ATNLVYLDLA----HNSFCG 127 (584)
Q Consensus 65 ~~v~~l~l~~-----------~~l~~~-~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~-l~~L~~L~l~----~N~l~~ 127 (584)
.+++.|+|++ |.+++. ++..+..+++|++|+++.|++++..+..+.. +++|+.|+|+ .|++++
T Consensus 342 ~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~ 421 (592)
T 3ogk_B 342 KQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITD 421 (592)
T ss_dssp TTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSS
T ss_pred CCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccC
Confidence 4577777772 455533 2222345677777777777776655555554 6677777774 566664
Q ss_pred C-----CCcccCCCCCCCeeecccC--CCCCCchHHhhc-cccCccEEEeccccCcc-ccCccccCCCCCcEEEeecCCC
Q 007935 128 P-----IPDRIKTLKNLTHLDLSSN--LLNGSLPEFLLD-LRALTGTLNLSFNQFSG-QIPEMYGHFPVMVSLDLRNNNL 198 (584)
Q Consensus 128 ~-----~p~~~~~l~~L~~L~ls~N--~l~~~~p~~~~~-l~~L~~~l~l~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l 198 (584)
. ++..+.++++|+.|+|+++ .+++..+..+.. +++|+ .|+|++|++++ .++..+..+++|+.|+|++|.|
T Consensus 422 ~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~-~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l 500 (592)
T 3ogk_B 422 LPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVR-WMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCF 500 (592)
T ss_dssp CCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCC-EEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCC
T ss_pred chHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccce-EeeccCCCCCHHHHHHHHhcCcccCeeeccCCCC
Confidence 3 2233455666777776532 355444444443 56666 66677666664 3344455666667777776666
Q ss_pred ccC-CCCC-CCccccCCcccCCCC
Q 007935 199 SGE-IPQV-GSLLNQGPTAFSGNP 220 (584)
Q Consensus 199 ~~~-~p~~-~~~~~~~~~~~~~n~ 220 (584)
++. ++.. ..+.++..+.+++|.
T Consensus 501 ~~~~~~~~~~~l~~L~~L~ls~n~ 524 (592)
T 3ogk_B 501 SERAIAAAVTKLPSLRYLWVQGYR 524 (592)
T ss_dssp BHHHHHHHHHHCSSCCEEEEESCB
T ss_pred cHHHHHHHHHhcCccCeeECcCCc
Confidence 542 1111 123344455555554
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.85 E-value=2.6e-09 Score=106.88 Aligned_cols=54 Identities=11% Similarity=0.159 Sum_probs=29.5
Q ss_pred CCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCee
Q 007935 88 LNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHL 142 (584)
Q Consensus 88 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L 142 (584)
+++|+.|+|.+ +++..-+..|.++++|+.|+|++|.+....+..|..+.++..+
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l 153 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFI 153 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEE
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEe
Confidence 66666666666 5654444556666666666666666543333344443333333
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.85 E-value=6.7e-09 Score=103.94 Aligned_cols=56 Identities=9% Similarity=0.230 Sum_probs=40.3
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecC
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLA 121 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~ 121 (584)
.+++.|+|++ +++..-+..|.++++|+.|+|++|.+...-+..|.++.++..+.++
T Consensus 101 ~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~ 156 (329)
T 3sb4_A 101 QTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLG 156 (329)
T ss_dssp TTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTT
T ss_pred CCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCc
Confidence 4689999999 8887777889999999999999998764444444444444444433
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=98.70 E-value=2.9e-09 Score=115.58 Aligned_cols=128 Identities=13% Similarity=0.075 Sum_probs=78.4
Q ss_pred EEEEEcCCCC-Ccc-cCCccccCCCCCCEEEccCCCCCCC----CcccccCCCCCCEEecCCCcccC----CCCcccCCC
Q 007935 67 VTSLYLPNRN-LTG-YMPSELGLLNSLTRLSLASNNFSKP----IPANLFNATNLVYLDLAHNSFCG----PIPDRIKTL 136 (584)
Q Consensus 67 v~~l~l~~~~-l~~-~~~~~~~~l~~L~~L~l~~n~l~~~----~p~~~~~l~~L~~L~l~~N~l~~----~~p~~~~~l 136 (584)
++.|+|+++. ++. .++.....+++|++|+|++|.+++. ++..+..+++|++|+|++|.+++ .++..+.++
T Consensus 140 L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~ 219 (592)
T 3ogk_B 140 LETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNC 219 (592)
T ss_dssp CCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHC
T ss_pred CcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhC
Confidence 7778877765 211 1223334677788888888877654 33344567778888888887762 334445567
Q ss_pred CCCCeeecccCCCCCCchHHhhccccCccEEEeccccCc---cccCccccCCCCCcEEEeecC
Q 007935 137 KNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFS---GQIPEMYGHFPVMVSLDLRNN 196 (584)
Q Consensus 137 ~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~---~~~p~~~~~l~~L~~L~l~~N 196 (584)
++|+.|+|++|.+. .+|..+.++++|+ .|+++.+... +..+..+..+++|+.|+++++
T Consensus 220 ~~L~~L~L~~~~~~-~l~~~~~~~~~L~-~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~ 280 (592)
T 3ogk_B 220 RSLVSVKVGDFEIL-ELVGFFKAAANLE-EFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYM 280 (592)
T ss_dssp TTCCEEECSSCBGG-GGHHHHHHCTTCC-EEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTC
T ss_pred CCCcEEeccCccHH-HHHHHHhhhhHHH-hhcccccccccchHHHHHHhhccccccccCcccc
Confidence 77888888887777 4677777777777 7777643221 222334444455555555543
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=98.68 E-value=1e-09 Score=105.04 Aligned_cols=104 Identities=25% Similarity=0.308 Sum_probs=73.1
Q ss_pred ccCCCCCCE--EEccCCCCCCCCccc----ccCCCCCCEEecCCCcccC--CCCcccCCCCCCCeeecccCCCCCCchHH
Q 007935 85 LGLLNSLTR--LSLASNNFSKPIPAN----LFNATNLVYLDLAHNSFCG--PIPDRIKTLKNLTHLDLSSNLLNGSLPEF 156 (584)
Q Consensus 85 ~~~l~~L~~--L~l~~n~l~~~~p~~----~~~l~~L~~L~l~~N~l~~--~~p~~~~~l~~L~~L~ls~N~l~~~~p~~ 156 (584)
|...+.|.. ++++.|... .++.. ..++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..
T Consensus 137 l~~dp~L~~~~l~l~~N~~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~ 213 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RE 213 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GG
T ss_pred cCCCcchhhcCccccCCHHH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hh
Confidence 444444544 667777433 23322 2467889999999999987 4566777889999999999999854 33
Q ss_pred hhccc--cCccEEEeccccCccccCc-------cccCCCCCcEEE
Q 007935 157 LLDLR--ALTGTLNLSFNQFSGQIPE-------MYGHFPVMVSLD 192 (584)
Q Consensus 157 ~~~l~--~L~~~l~l~~N~l~~~~p~-------~~~~l~~L~~L~ 192 (584)
+..+. .|+ .|+|++|.+++.+|+ .+..+++|+.||
T Consensus 214 l~~l~~l~L~-~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 214 LDKIKGLKLE-ELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGGTTSCCS-EEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhhcccCCcc-eEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 45555 888 899999999877663 366788888776
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=98.63 E-value=8.6e-08 Score=92.18 Aligned_cols=110 Identities=14% Similarity=0.108 Sum_probs=76.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceE--EEEEEecCCCcc-----------------------hhhHhHHHHHHHHHh
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTV--VAVRRLTEGDAT-----------------------WRFKDFESEVEAIAR 401 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~--vAvK~l~~~~~~-----------------------~~~~~f~~Ei~~l~~ 401 (584)
...||+|+||.||+|.....+ +. ||||.++..... .....+.+|+.+|.+
T Consensus 52 ~~~ig~G~~g~Vy~a~~~~~g-----~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 126 (258)
T 1zth_A 52 GGVISTGKEANVFYADGVFDG-----KPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLER 126 (258)
T ss_dssp EEEEEECSSEEEEEEEEEETT-----EEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHH
T ss_pred CCEEeecceEEEEEEEEcCCC-----cEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHH
Confidence 478999999999999983333 78 999987643111 011368899999999
Q ss_pred cCCCce--eeeeEEEEeCCceeEeeecccC-C----cHH----------------------HHHh-ccc--ccccCCCCc
Q 007935 402 VQHPNI--VRLKAFYYANDEKLLISDFIRN-G----SLY----------------------AALH-GFG--LNRLLPGTS 449 (584)
Q Consensus 402 l~HpnI--V~l~g~~~~~~~~~lV~Ey~~~-G----sL~----------------------~~L~-~~g--~~~~~~~~~ 449 (584)
++|+++ ...+++ +..+|||||+.+ | +|. .+|| ..| |+|+++.|+
T Consensus 127 l~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~NI 202 (258)
T 1zth_A 127 AKEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNI 202 (258)
T ss_dssp HHHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGGGGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTSE
T ss_pred HHhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhccChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHE
Confidence 988864 344432 467999999942 4 553 3456 544 688888888
Q ss_pred cccccCeEEecCCCcccc
Q 007935 450 KVTKNETIVTSGTGSRIS 467 (584)
Q Consensus 450 ~i~~~~~~~~~~~~~~~~ 467 (584)
.+.. .++..|||....
T Consensus 203 Ll~~--~~~liDFG~a~~ 218 (258)
T 1zth_A 203 MYID--KVYFIDMGQAVT 218 (258)
T ss_dssp EESS--SEEECCCTTCEE
T ss_pred EEcC--cEEEEECccccc
Confidence 7766 667788876543
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=98.61 E-value=5.6e-09 Score=95.02 Aligned_cols=115 Identities=18% Similarity=0.241 Sum_probs=61.0
Q ss_pred cccCCCCCCEEEccCC-CCCCC----CcccccCCCCCCEEecCCCcccCC----CCcccCCCCCCCeeecccCCCCCC--
Q 007935 84 ELGLLNSLTRLSLASN-NFSKP----IPANLFNATNLVYLDLAHNSFCGP----IPDRIKTLKNLTHLDLSSNLLNGS-- 152 (584)
Q Consensus 84 ~~~~l~~L~~L~l~~n-~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~ls~N~l~~~-- 152 (584)
.+...++|++|+|++| .|... +...+...++|++|+|++|+|... +...+...++|++|+|++|.|+..
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~ 110 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGI 110 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHH
Confidence 3444555666666665 55421 223344455666666666665421 223334445666666666666532
Q ss_pred --chHHhhccccCccEEEe--ccccCccc----cCccccCCCCCcEEEeecCCCc
Q 007935 153 --LPEFLLDLRALTGTLNL--SFNQFSGQ----IPEMYGHFPVMVSLDLRNNNLS 199 (584)
Q Consensus 153 --~p~~~~~l~~L~~~l~l--~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~ 199 (584)
+...+...+.|+ .|+| ++|.|+.. +...+...++|++|+|++|.+.
T Consensus 111 ~~l~~~L~~n~~L~-~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 111 LALVEALQSNTSLI-ELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHGGGGCSSCC-EEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHhCCCce-EEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 334445555666 6666 55666532 2333444566777777777654
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=98.57 E-value=4.3e-09 Score=114.30 Aligned_cols=154 Identities=16% Similarity=0.158 Sum_probs=90.9
Q ss_pred CCEEEEEc---------CCCCCcccCCcccc-CCCCCCEEEccCCCCCCCCccccc-CCCCCCEEecC--C----CcccC
Q 007935 65 NRVTSLYL---------PNRNLTGYMPSELG-LLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLA--H----NSFCG 127 (584)
Q Consensus 65 ~~v~~l~l---------~~~~l~~~~~~~~~-~l~~L~~L~l~~n~l~~~~p~~~~-~l~~L~~L~l~--~----N~l~~ 127 (584)
.+++.|+| ..+.+++.....+. .+++|+.|+++.|++++..+..+. .+++|+.|+|+ + |++++
T Consensus 338 ~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~ 417 (594)
T 2p1m_B 338 KDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTL 417 (594)
T ss_dssp TTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTC
T ss_pred CCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccC
Confidence 45777777 33445433222232 367777777777777765444444 47778888877 3 45542
Q ss_pred C-----CCcccCCCCCCCeeecccCCCCCCchHHhhc-cccCccEEEeccccCccccCccc-cCCCCCcEEEeecCCCcc
Q 007935 128 P-----IPDRIKTLKNLTHLDLSSNLLNGSLPEFLLD-LRALTGTLNLSFNQFSGQIPEMY-GHFPVMVSLDLRNNNLSG 200 (584)
Q Consensus 128 ~-----~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~-l~~L~~~l~l~~N~l~~~~p~~~-~~l~~L~~L~l~~N~l~~ 200 (584)
. ++..+..+++|+.|+|++ .+++..+..+.. +++|+ .|+|++|.+++..+..+ ..+++|+.|+|++|.+++
T Consensus 418 ~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~-~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~ 495 (594)
T 2p1m_B 418 EPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKME-MLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGD 495 (594)
T ss_dssp CCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCC-EEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCH
T ss_pred CchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhcc-EeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcH
Confidence 1 111245667777777766 565555555554 67777 77777777765544444 557777777777777754
Q ss_pred CCC--CCCCccccCCcccCCCC
Q 007935 201 EIP--QVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 201 ~~p--~~~~~~~~~~~~~~~n~ 220 (584)
... -...+.++..+.+.+|+
T Consensus 496 ~~~~~~~~~l~~L~~L~l~~~~ 517 (594)
T 2p1m_B 496 KALLANASKLETMRSLWMSSCS 517 (594)
T ss_dssp HHHHHTGGGGGGSSEEEEESSC
T ss_pred HHHHHHHHhCCCCCEEeeeCCC
Confidence 322 11224455555666654
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.52 E-value=4.5e-08 Score=98.64 Aligned_cols=111 Identities=17% Similarity=0.239 Sum_probs=52.9
Q ss_pred CCCCCEEEccCCCCCCCCccccc--CCCCCCEEecCC--CcccCC-----CCccc--CCCCCCCeeecccCCCCCCchHH
Q 007935 88 LNSLTRLSLASNNFSKPIPANLF--NATNLVYLDLAH--NSFCGP-----IPDRI--KTLKNLTHLDLSSNLLNGSLPEF 156 (584)
Q Consensus 88 l~~L~~L~l~~n~l~~~~p~~~~--~l~~L~~L~l~~--N~l~~~-----~p~~~--~~l~~L~~L~ls~N~l~~~~p~~ 156 (584)
+++|++|+|..|.++...-..+. .+++|+.|+|+. |...+. +...+ ..+++|+.|+|++|.+++..+..
T Consensus 192 ~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~ 271 (362)
T 2ra8_A 192 RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEM 271 (362)
T ss_dssp CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHH
T ss_pred CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHH
Confidence 45555555555554432222222 455666665542 221111 01111 23556666666666655333333
Q ss_pred hh---ccccCccEEEeccccCccc----cCccccCCCCCcEEEeecCCCc
Q 007935 157 LL---DLRALTGTLNLSFNQFSGQ----IPEMYGHFPVMVSLDLRNNNLS 199 (584)
Q Consensus 157 ~~---~l~~L~~~l~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~ 199 (584)
+. .+++|+ .|+|+.|.|++. ++..+.++++|+.|+|++|.|+
T Consensus 272 la~a~~~~~L~-~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 272 FLESDILPQLE-TMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp HHHCSSGGGCS-EEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred HHhCccCCCCC-EEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 33 345566 666666666542 2333344556666666666554
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=98.47 E-value=2.3e-08 Score=90.85 Aligned_cols=110 Identities=17% Similarity=0.246 Sum_probs=88.2
Q ss_pred CCEEEEEcCCC-CCccc----CCccccCCCCCCEEEccCCCCCCC----CcccccCCCCCCEEecCCCcccCC----CCc
Q 007935 65 NRVTSLYLPNR-NLTGY----MPSELGLLNSLTRLSLASNNFSKP----IPANLFNATNLVYLDLAHNSFCGP----IPD 131 (584)
Q Consensus 65 ~~v~~l~l~~~-~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~----~p~ 131 (584)
..+++|+|++| ++... +...+...++|++|+|++|.|... +...+...++|++|+|++|+|+.. +..
T Consensus 36 ~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~ 115 (185)
T 1io0_A 36 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVE 115 (185)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHH
T ss_pred CCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHH
Confidence 57999999999 88743 455677789999999999999742 344455668999999999999753 456
Q ss_pred ccCCCCCCCeeec--ccCCCCCC----chHHhhccccCccEEEeccccCc
Q 007935 132 RIKTLKNLTHLDL--SSNLLNGS----LPEFLLDLRALTGTLNLSFNQFS 175 (584)
Q Consensus 132 ~~~~l~~L~~L~l--s~N~l~~~----~p~~~~~l~~L~~~l~l~~N~l~ 175 (584)
.+...++|+.|+| ++|.|+.. +...+...+.|+ .|+|++|.+.
T Consensus 116 ~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~-~L~L~~n~i~ 164 (185)
T 1io0_A 116 ALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLL-KFGYHFTQQG 164 (185)
T ss_dssp GGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCC-EEECCCSSHH
T ss_pred HHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcC-EEeccCCCCC
Confidence 6778889999999 88999743 345566668999 9999999986
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=98.47 E-value=6.8e-08 Score=97.16 Aligned_cols=102 Identities=7% Similarity=0.019 Sum_probs=65.6
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcc-------------hhhHhH--------HHHHHHHHhcCC
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-------------WRFKDF--------ESEVEAIARVQH 404 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~-------------~~~~~f--------~~Ei~~l~~l~H 404 (584)
....||+|++|.||+|...++ +.||||.++..... ...... .+|...|.++.+
T Consensus 99 I~~~IG~Gk~a~VY~a~d~~G------~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~ 172 (397)
T 4gyi_A 99 VGSRIGVGKESDIMIVADEKG------KQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYE 172 (397)
T ss_dssp EEEEEEECSSEEEEEEECTTC------CEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCEeeeCCceEEEEEECCCC------CEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHh
Confidence 357899999999999998766 79999988643110 001122 245555666644
Q ss_pred CceeeeeEEEEeCCceeEeeecccCCcHH-------------------HHHhcc--cccccCCCCccccccC
Q 007935 405 PNIVRLKAFYYANDEKLLISDFIRNGSLY-------------------AALHGF--GLNRLLPGTSKVTKNE 455 (584)
Q Consensus 405 pnIV~l~g~~~~~~~~~lV~Ey~~~GsL~-------------------~~L~~~--g~~~~~~~~~~i~~~~ 455 (584)
.++....-+.. ...+|||||+++++|. .++|.. .|+|+++.|+.+..++
T Consensus 173 ~gv~vp~p~~~--~~~~LVME~i~G~~L~~l~~~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dg 242 (397)
T 4gyi_A 173 EGFPVPEPIAQ--SRHTIVMSLVDALPMRQVSSVPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEK 242 (397)
T ss_dssp TTCSCCCEEEE--ETTEEEEECCSCEEGGGCCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEE
T ss_pred cCCCCCeeeec--cCceEEEEecCCccHhhhcccHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCC
Confidence 43322111111 2347999999998873 344544 4789999999887765
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=98.38 E-value=6.2e-08 Score=105.12 Aligned_cols=130 Identities=18% Similarity=0.185 Sum_probs=93.0
Q ss_pred CCEEEEEcCCCCCcccCCcccc-CCCCCCEEEccCC-CCCCC-CcccccCCCCCCEEecCCCcccCCCCccc----CCCC
Q 007935 65 NRVTSLYLPNRNLTGYMPSELG-LLNSLTRLSLASN-NFSKP-IPANLFNATNLVYLDLAHNSFCGPIPDRI----KTLK 137 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~-~l~~L~~L~l~~n-~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p~~~----~~l~ 137 (584)
.+++.|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+ ..++
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 4688899998888877666665 6889999999888 55432 44444578899999999998876544433 3667
Q ss_pred CCCeeecccCC--CCC-CchHHhhccccCccEEEeccc-cCccccCccccCCCCCcEEEeecC
Q 007935 138 NLTHLDLSSNL--LNG-SLPEFLLDLRALTGTLNLSFN-QFSGQIPEMYGHFPVMVSLDLRNN 196 (584)
Q Consensus 138 ~L~~L~ls~N~--l~~-~~p~~~~~l~~L~~~l~l~~N-~l~~~~p~~~~~l~~L~~L~l~~N 196 (584)
+|+.|+|++|. ++. .++..+.++++|+ .|+|++| .+.+ +|..+.++++|+.|+++.+
T Consensus 185 ~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~-~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~ 245 (594)
T 2p1m_B 185 SLVSLNISCLASEVSFSALERLVTRCPNLK-SLKLNRAVPLEK-LATLLQRAPQLEELGTGGY 245 (594)
T ss_dssp CCCEEECTTCCSCCCHHHHHHHHHHCTTCC-EEECCTTSCHHH-HHHHHHHCTTCSEEECSBC
T ss_pred cCcEEEecccCCcCCHHHHHHHHHhCCCCc-EEecCCCCcHHH-HHHHHhcCCcceEcccccc
Confidence 89999999887 221 1222334568888 8999888 4443 7778888888888886554
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=98.25 E-value=4.9e-06 Score=85.19 Aligned_cols=127 Identities=14% Similarity=0.194 Sum_probs=86.9
Q ss_pred CEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecc
Q 007935 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLS 145 (584)
Q Consensus 66 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls 145 (584)
.++.+.|.+ ++...-+..|.++++|+.++|++|+++. +|...+..++|+.+.|..| ++..-...|.++++|+.++|.
T Consensus 158 ~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~-I~~~aF~~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~ 234 (401)
T 4fdw_A 158 TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITK-LPASTFVYAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIP 234 (401)
T ss_dssp CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSE-ECTTTTTTCCCSEEECCTT-CCEECTTTTTTCTTCCCEECC
T ss_pred CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceE-echhhEeecccCEEEeCCc-hheehhhHhhCCCCCCEEecC
Confidence 366677764 5665556677788888888888888774 5544445677888888744 554555677888888888887
Q ss_pred cCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCc
Q 007935 146 SNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLS 199 (584)
Q Consensus 146 ~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 199 (584)
.| ++..-...|.+ ..|+ .+.| .|.++..-...|.++++|+.+++.+|.+.
T Consensus 235 ~~-l~~I~~~aF~~-~~L~-~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~ 284 (401)
T 4fdw_A 235 EN-VSTIGQEAFRE-SGIT-TVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFN 284 (401)
T ss_dssp TT-CCEECTTTTTT-CCCS-EEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCC
T ss_pred CC-ccCcccccccc-CCcc-EEEe-CCCccEEChhHhhCCCCCCEEEeCCcccc
Confidence 65 44233344555 6777 7777 45566555677888888888888887765
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=98.24 E-value=3.9e-06 Score=85.90 Aligned_cols=124 Identities=10% Similarity=0.134 Sum_probs=83.0
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.++|++|+++......|. ..+|+.+.|.+| ++..-...|.++++|+.++|..| ++..-...|.+ .+|+.++|
T Consensus 180 ~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l 255 (401)
T 4fdw_A 180 YNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL 255 (401)
T ss_dssp TTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE
T ss_pred ccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe
Confidence 4688999999988865556665 588888888844 66555667788888888888765 44333445555 56777777
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCc-----cccCccccCCCCCcEEEee
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFS-----GQIPEMYGHFPVMVSLDLR 194 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~-----~~~p~~~~~l~~L~~L~l~ 194 (584)
.|.++..-+..|.++++|+ .+++.+|.+. ...+..|.++++|+.++|.
T Consensus 256 -p~~i~~I~~~aF~~c~~L~-~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~ 308 (401)
T 4fdw_A 256 -PNGVTNIASRAFYYCPELA-EVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP 308 (401)
T ss_dssp -ETTCCEECTTTTTTCTTCC-EEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC
T ss_pred -CCCccEEChhHhhCCCCCC-EEEeCCccccCCcccEECHHHhhCCccCCeEEeC
Confidence 3445433455666777777 7777666554 3445566667777777766
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.12 E-value=1.1e-06 Score=88.58 Aligned_cols=132 Identities=17% Similarity=0.196 Sum_probs=79.9
Q ss_pred CCEEEEEcCCCCCc---------ccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccC-
Q 007935 65 NRVTSLYLPNRNLT---------GYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIK- 134 (584)
Q Consensus 65 ~~v~~l~l~~~~l~---------~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~- 134 (584)
.+++.|.+.++... +.+...+..+++|+.|+|++|.-. .++. + .+++|+.|+|..|.++......+.
T Consensus 139 ~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~ 215 (362)
T 2ra8_A 139 AHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDILG 215 (362)
T ss_dssp TTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHH
T ss_pred chhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHHH
Confidence 46777777654331 224455667788888888877311 2333 3 377888888887776533222332
Q ss_pred -CCCCCCeeeccc--CCCCCC--c---hHHh--hccccCccEEEeccccCccccCcccc---CCCCCcEEEeecCCCcc
Q 007935 135 -TLKNLTHLDLSS--NLLNGS--L---PEFL--LDLRALTGTLNLSFNQFSGQIPEMYG---HFPVMVSLDLRNNNLSG 200 (584)
Q Consensus 135 -~l~~L~~L~ls~--N~l~~~--~---p~~~--~~l~~L~~~l~l~~N~l~~~~p~~~~---~l~~L~~L~l~~N~l~~ 200 (584)
.+++|+.|+|+. |...+. + ...+ ..+++|+ .|+|++|++++..+..+. .+++|+.|+|+.|.|++
T Consensus 216 ~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr-~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d 293 (362)
T 2ra8_A 216 SDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLK-WLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTD 293 (362)
T ss_dssp SBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCC-EEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBH
T ss_pred ccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcC-EEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCCh
Confidence 678888888753 222111 1 1112 2467788 888888887654333332 46788888888888775
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=97.57 E-value=4.3e-05 Score=67.65 Aligned_cols=34 Identities=3% Similarity=-0.050 Sum_probs=17.0
Q ss_pred CCCEEEccCCCCCCCCcccccCCCCCCEEecCCC
Q 007935 90 SLTRLSLASNNFSKPIPANLFNATNLVYLDLAHN 123 (584)
Q Consensus 90 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N 123 (584)
.|+.|||+++.++..--..+.++++|+.|+|+++
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 4666666666654322223344445555555444
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=97.34 E-value=5.8e-05 Score=66.79 Aligned_cols=82 Identities=10% Similarity=0.099 Sum_probs=43.3
Q ss_pred CEEEEEcCCCCCcccCCccccCCCCCCEEEccCCC-CCCCCcccccCC----CCCCEEecCCCc-ccCCCCcccCCCCCC
Q 007935 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNN-FSKPIPANLFNA----TNLVYLDLAHNS-FCGPIPDRIKTLKNL 139 (584)
Q Consensus 66 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~-l~~~~p~~~~~l----~~L~~L~l~~N~-l~~~~p~~~~~l~~L 139 (584)
++++|||+++.++..--..+..+++|++|+|++|. |+..-=..+..+ ++|++|+|+++. ++..--..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 46777777666654433445666677777777663 443211223332 246666666653 442211234455666
Q ss_pred CeeecccC
Q 007935 140 THLDLSSN 147 (584)
Q Consensus 140 ~~L~ls~N 147 (584)
+.|+|++.
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 66666655
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=97.33 E-value=5.7e-05 Score=68.16 Aligned_cols=109 Identities=14% Similarity=0.172 Sum_probs=47.7
Q ss_pred CCCCCEEEccCC-CCCCC----CcccccCCCCCCEEecCCCcccC----CCCcccCCCCCCCeeecccCCCCCC----ch
Q 007935 88 LNSLTRLSLASN-NFSKP----IPANLFNATNLVYLDLAHNSFCG----PIPDRIKTLKNLTHLDLSSNLLNGS----LP 154 (584)
Q Consensus 88 l~~L~~L~l~~n-~l~~~----~p~~~~~l~~L~~L~l~~N~l~~----~~p~~~~~l~~L~~L~ls~N~l~~~----~p 154 (584)
-+.|++|+|++| .|... +-..+..-+.|+.|+|++|+|.. .+...+..-+.|+.|+|++|+|+.. +-
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala 119 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLL 119 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHH
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHH
Confidence 344555555553 44311 22233334455555555555542 1222233344555566666555421 11
Q ss_pred HHhhccccCccEEEeccc---cCcc----ccCccccCCCCCcEEEeecCC
Q 007935 155 EFLLDLRALTGTLNLSFN---QFSG----QIPEMYGHFPVMVSLDLRNNN 197 (584)
Q Consensus 155 ~~~~~l~~L~~~l~l~~N---~l~~----~~p~~~~~l~~L~~L~l~~N~ 197 (584)
..+..-+.|+ .|+|++| ++.. .+-+.+..-+.|+.|+++.|.
T Consensus 120 ~aL~~N~tL~-~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 120 RSTLVTQSIV-EFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFAS 168 (197)
T ss_dssp HHTTTTCCCS-EEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHHhhCCcee-EEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCC
Confidence 2223334455 5555543 2221 122333344556666665554
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00012 Score=66.11 Aligned_cols=111 Identities=11% Similarity=0.157 Sum_probs=80.7
Q ss_pred CCCEEEEEcCCC-CCccc----CCccccCCCCCCEEEccCCCCCCC----CcccccCCCCCCEEecCCCcccCC----CC
Q 007935 64 RNRVTSLYLPNR-NLTGY----MPSELGLLNSLTRLSLASNNFSKP----IPANLFNATNLVYLDLAHNSFCGP----IP 130 (584)
Q Consensus 64 ~~~v~~l~l~~~-~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~----~p 130 (584)
...+++|+|++| +|... +...+..=+.|+.|+|++|.|... +...+..=+.|++|+|++|+|+.. +-
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala 119 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLL 119 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHH
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHH
Confidence 357999999986 77532 455667778999999999999742 333344557899999999999742 33
Q ss_pred cccCCCCCCCeeecccCC---CCC----CchHHhhccccCccEEEeccccCc
Q 007935 131 DRIKTLKNLTHLDLSSNL---LNG----SLPEFLLDLRALTGTLNLSFNQFS 175 (584)
Q Consensus 131 ~~~~~l~~L~~L~ls~N~---l~~----~~p~~~~~l~~L~~~l~l~~N~l~ 175 (584)
..+..-+.|+.|+|++|. +.. .+-..+..-+.|. .|+++.|.+.
T Consensus 120 ~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~-~L~l~~~~~g 170 (197)
T 1pgv_A 120 RSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLL-RVGISFASME 170 (197)
T ss_dssp HHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCC-EEECCCCCHH
T ss_pred HHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcC-eEeccCCCcc
Confidence 445666789999999763 332 1345566668898 9999988754
|
| >4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} | Back alignment and structure |
|---|
Probab=97.14 E-value=0.00098 Score=67.88 Aligned_cols=117 Identities=7% Similarity=0.114 Sum_probs=86.0
Q ss_pred CcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHH
Q 007935 77 LTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEF 156 (584)
Q Consensus 77 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~ 156 (584)
++..-...|..+..|+.+.+..+..+ .-...|.++++|+.+.+. +.++..-...|.++.+|+.++|..| ++..-...
T Consensus 253 v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~a 329 (394)
T 4gt6_A 253 VARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDA 329 (394)
T ss_dssp EEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTT
T ss_pred ceEcccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhH
Confidence 33333557788889999998765443 345667888999999986 4555444567888999999999765 55344567
Q ss_pred hhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCC
Q 007935 157 LLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNL 198 (584)
Q Consensus 157 ~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l 198 (584)
|.++.+|+ .+.|..| ++..-...|.++++|+.+++.+|..
T Consensus 330 F~~C~~L~-~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 330 FAGCEQLE-RIAIPSS-VTKIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp TTTCTTCC-EEEECTT-CCBCCGGGGTTCTTCCEEEESSCHH
T ss_pred hhCCCCCC-EEEECcc-cCEEhHhHhhCCCCCCEEEECCcee
Confidence 88899998 8988655 6645567889999999999888754
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0013 Score=62.82 Aligned_cols=80 Identities=10% Similarity=-0.020 Sum_probs=63.7
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcC-CCceeeeeEEEEeCCceeEeeec
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-HPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~-HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
..++.|+.+.||++... + ..+++|....... .....+.+|+++++.+. |..+.++++++.+.+..|+||||
T Consensus 20 ~~~~g~s~~~v~~~~~~-~------~~~vlK~~~~~~~-~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~ 91 (263)
T 3tm0_A 20 KDTEGMSPAKVYKLVGE-N------ENLYLKMTDSRYK-GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSE 91 (263)
T ss_dssp ECCSCCSSSEEEEEECS-S------CEEEEEEECGGGT-TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEEC
T ss_pred eeccCCCCCeEEEEECC-C------CcEEEEeCCcccC-CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEe
Confidence 45677778899998754 2 5899999875321 12257899999999994 77888999999998899999999
Q ss_pred ccCCcHHHH
Q 007935 427 IRNGSLYAA 435 (584)
Q Consensus 427 ~~~GsL~~~ 435 (584)
++|.+|.+.
T Consensus 92 i~G~~l~~~ 100 (263)
T 3tm0_A 92 ADGVLCSEE 100 (263)
T ss_dssp CSSEEHHHH
T ss_pred cCCeehhhc
Confidence 999998765
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0011 Score=55.84 Aligned_cols=37 Identities=22% Similarity=0.237 Sum_probs=20.6
Q ss_pred CCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCC
Q 007935 114 NLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLN 150 (584)
Q Consensus 114 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 150 (584)
+|+.|+|++|+|+..-+..|..+++|+.|+|++|.+.
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 3555555555555443444555666666666666553
|
| >4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0021 Score=65.44 Aligned_cols=87 Identities=5% Similarity=0.104 Sum_probs=54.6
Q ss_pred cccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCC
Q 007935 106 PANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHF 185 (584)
Q Consensus 106 p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l 185 (584)
...|.++.+|+.+.+..+..+ .-...|.++.+|+.+.+. +.++..-...|.++.+|+ .++|..| ++..-...|.++
T Consensus 258 ~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~-~i~lp~~-v~~I~~~aF~~C 333 (394)
T 4gt6_A 258 THAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLK-SIDIPEG-ITQILDDAFAGC 333 (394)
T ss_dssp TTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCC-EEECCTT-CCEECTTTTTTC
T ss_pred cceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcC-EEEeCCc-ccEehHhHhhCC
Confidence 345667777777777655443 334566777777777775 344423345667777777 7777654 443445667777
Q ss_pred CCCcEEEeecC
Q 007935 186 PVMVSLDLRNN 196 (584)
Q Consensus 186 ~~L~~L~l~~N 196 (584)
++|+.+.+..+
T Consensus 334 ~~L~~i~ip~s 344 (394)
T 4gt6_A 334 EQLERIAIPSS 344 (394)
T ss_dssp TTCCEEEECTT
T ss_pred CCCCEEEECcc
Confidence 77777777543
|
| >4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0023 Score=65.16 Aligned_cols=83 Identities=10% Similarity=0.123 Sum_probs=42.5
Q ss_pred ccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCC
Q 007935 109 LFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVM 188 (584)
Q Consensus 109 ~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L 188 (584)
|..+.+|+.+.+..| ++..-...|.++.+|+.++|.++ ++..-...|.++.+|+ .+++..| ++..-...|.++++|
T Consensus 293 F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~-~i~lp~~-l~~I~~~aF~~C~~L 368 (394)
T 4fs7_A 293 FYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLS-NINFPLS-LRKIGANAFQGCINL 368 (394)
T ss_dssp TTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCC-EECCCTT-CCEECTTTBTTCTTC
T ss_pred ccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCC-EEEECcc-ccEehHHHhhCCCCC
Confidence 444555555555433 33222344555666666666433 4422234555666666 5666544 443344556666666
Q ss_pred cEEEeec
Q 007935 189 VSLDLRN 195 (584)
Q Consensus 189 ~~L~l~~ 195 (584)
+.+++..
T Consensus 369 ~~i~lp~ 375 (394)
T 4fs7_A 369 KKVELPK 375 (394)
T ss_dssp CEEEEEG
T ss_pred CEEEECC
Confidence 6666543
|
| >4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0022 Score=64.90 Aligned_cols=110 Identities=10% Similarity=0.105 Sum_probs=62.0
Q ss_pred CccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccc
Q 007935 82 PSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLR 161 (584)
Q Consensus 82 ~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~ 161 (584)
...+....+|+.+.+..+ +...-...+.++.+|+.+.+..+ ++..-...|.++.+|+.+.+..+ ++..-...|.++.
T Consensus 210 ~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~ 286 (379)
T 4h09_A 210 AYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCS 286 (379)
T ss_dssp TTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCT
T ss_pred ecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccc
Confidence 344555666666666543 33233445566666766666554 33233445666666666666543 3322334556666
Q ss_pred cCccEEEeccccCccccCccccCCCCCcEEEeec
Q 007935 162 ALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRN 195 (584)
Q Consensus 162 ~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~ 195 (584)
+|+ .+.+.+|.++..-...|.++++|+.+.|..
T Consensus 287 ~L~-~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~ 319 (379)
T 4h09_A 287 NLT-KVVMDNSAIETLEPRVFMDCVKLSSVTLPT 319 (379)
T ss_dssp TCC-EEEECCTTCCEECTTTTTTCTTCCEEECCT
T ss_pred ccc-cccccccccceehhhhhcCCCCCCEEEcCc
Confidence 666 666666666644455666666666666643
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0019 Score=54.23 Aligned_cols=57 Identities=26% Similarity=0.261 Sum_probs=45.4
Q ss_pred EEEEcCCCCCc-ccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCccc
Q 007935 68 TSLYLPNRNLT-GYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFC 126 (584)
Q Consensus 68 ~~l~l~~~~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~ 126 (584)
+.++.++++|+ ..+|..+. .+|+.|+|++|+|+..-+..|..+++|+.|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 36788888887 35565432 37999999999999755666788999999999999875
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0021 Score=60.90 Aligned_cols=73 Identities=8% Similarity=0.150 Sum_probs=56.7
Q ss_pred eeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCc--eeeeeEEEEeCCceeEeeeccc
Q 007935 351 GKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPN--IVRLKAFYYANDEKLLISDFIR 428 (584)
Q Consensus 351 G~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~Hpn--IV~l~g~~~~~~~~~lV~Ey~~ 428 (584)
+.|..+.||++...++ ..+++|..... ....+.+|+++++.+++.+ +.+++++...++..++||||++
T Consensus 29 ~gg~~~~v~~~~~~~g------~~~vlK~~~~~----~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~ 98 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGR------PVLFVKTDLSG----ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVP 98 (264)
T ss_dssp CTTSSCEEEEEECTTS------CCEEEEEECSC----TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCS
T ss_pred cCCCCceEEEEecCCC------CeEEEEeCCcc----cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecC
Confidence 3555699999976544 57999987653 1256889999999996544 5568998888888999999999
Q ss_pred CCcHH
Q 007935 429 NGSLY 433 (584)
Q Consensus 429 ~GsL~ 433 (584)
|.+|.
T Consensus 99 G~~l~ 103 (264)
T 1nd4_A 99 GQDLL 103 (264)
T ss_dssp SEETT
T ss_pred CcccC
Confidence 98874
|
| >4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=96.38 E-value=0.0043 Score=63.06 Aligned_cols=103 Identities=14% Similarity=0.047 Sum_probs=79.1
Q ss_pred ccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhcccc
Q 007935 83 SELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRA 162 (584)
Q Consensus 83 ~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~ 162 (584)
..|..+.+|+.+.+..+ ++..-...|.++++|+.++|..+ ++..-...|.++.+|+.++|..| ++..-...|.++.+
T Consensus 291 ~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~ 367 (394)
T 4fs7_A 291 KTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCIN 367 (394)
T ss_dssp TTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTT
T ss_pred ccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCC
Confidence 35667788888888754 65444567889999999999755 66444678999999999999887 66445678999999
Q ss_pred CccEEEeccccCccccCccccCCCCCcEE
Q 007935 163 LTGTLNLSFNQFSGQIPEMYGHFPVMVSL 191 (584)
Q Consensus 163 L~~~l~l~~N~l~~~~p~~~~~l~~L~~L 191 (584)
|+ .+++..| ++ .+...|.++++|+.+
T Consensus 368 L~-~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 368 LK-KVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp CC-EEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred CC-EEEECCC-CE-EhhheecCCCCCcEE
Confidence 99 9999766 33 345678888888765
|
| >4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} | Back alignment and structure |
|---|
Probab=96.37 E-value=0.0056 Score=61.80 Aligned_cols=126 Identities=12% Similarity=0.112 Sum_probs=95.7
Q ss_pred CEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecc
Q 007935 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLS 145 (584)
Q Consensus 66 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls 145 (584)
.+..+.+..+ +...-...+.+...|+.+.+..+ ++..-...|.++.+|+.+.+..+ +...-...|.++.+|+.+++.
T Consensus 218 ~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~ 294 (379)
T 4h09_A 218 NLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMD 294 (379)
T ss_dssp SCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEEC
T ss_pred ccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccccccccccc
Confidence 4566666433 44445667888999999999866 65444567888999999999754 543445678999999999999
Q ss_pred cCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecC
Q 007935 146 SNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNN 196 (584)
Q Consensus 146 ~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N 196 (584)
+|.++..-...|.++.+|+ .++|..| ++..-...|.++++|+.+.+..+
T Consensus 295 ~~~i~~I~~~aF~~c~~L~-~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 295 NSAIETLEPRVFMDCVKLS-SVTLPTA-LKTIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp CTTCCEECTTTTTTCTTCC-EEECCTT-CCEECTTTTTTCTTCCCCCCCTT
T ss_pred ccccceehhhhhcCCCCCC-EEEcCcc-ccEEHHHHhhCCCCCCEEEECCc
Confidence 9988845567899999999 9999765 66455678999999998877543
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=96.06 E-value=0.0077 Score=60.27 Aligned_cols=78 Identities=12% Similarity=0.156 Sum_probs=55.7
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEec--CCCcchhhHhHHHHHHHHHhcC--CCceeeeeEEEEeC---Cce
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLT--EGDATWRFKDFESEVEAIARVQ--HPNIVRLKAFYYAN---DEK 420 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~--~~~~~~~~~~f~~Ei~~l~~l~--HpnIV~l~g~~~~~---~~~ 420 (584)
+.++.|.++.||+....+ ..+++|+.. ..........+.+|+.+++.++ +..+.++++++.+. +..
T Consensus 44 ~~l~~G~sn~~y~v~~~~-------~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~ 116 (359)
T 3dxp_A 44 EQFKGGQSNPTFKLVTPG-------QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRA 116 (359)
T ss_dssp EECCC-CCSCEEEEECSS-------CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSC
T ss_pred EEcCCcccceEEEEEECC-------ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCe
Confidence 458899999999988654 467788776 3321122357889999999996 45688999988776 458
Q ss_pred eEeeecccCCcH
Q 007935 421 LLISDFIRNGSL 432 (584)
Q Consensus 421 ~lV~Ey~~~GsL 432 (584)
|+||||++|..+
T Consensus 117 ~~vme~v~G~~l 128 (359)
T 3dxp_A 117 FYIMEFVSGRVL 128 (359)
T ss_dssp EEEEECCCCBCC
T ss_pred EEEEEecCCeec
Confidence 999999998766
|
| >2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.04 E-value=0.0091 Score=38.63 Aligned_cols=27 Identities=15% Similarity=0.263 Sum_probs=14.1
Q ss_pred cEEEeehhHHHHHHHHhhhheeeeehh
Q 007935 271 SVVVSVISGVSVVVGVVSVSVWLFRRK 297 (584)
Q Consensus 271 ~iv~~vv~~~~~vl~vv~~~~~~~~r~ 297 (584)
.|++++++|++++++++++++++.+||
T Consensus 12 ~IA~gVVgGv~~~~ii~~~~~~~~RRr 38 (44)
T 2ks1_B 12 SIATGMVGALLLLLVVALGIGLFMRRR 38 (44)
T ss_dssp SSTHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred eEEeehhHHHHHHHHHHHHHHHHhhhh
Confidence 456666666666554444443443333
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=94.03 E-value=0.12 Score=48.99 Aligned_cols=78 Identities=13% Similarity=0.218 Sum_probs=58.1
Q ss_pred ceeecCc-eEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcC-CCceeeeeEEEEeCCceeEeeecc
Q 007935 350 VGKSKNG-IMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-HPNIVRLKAFYYANDEKLLISDFI 427 (584)
Q Consensus 350 iG~G~~g-~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~-HpnIV~l~g~~~~~~~~~lV~Ey~ 427 (584)
+..|..| .||+.....++ ..+.+|+-... ...++.+|...|+.+. +--+.++++++.+.+..++|||++
T Consensus 32 ~~~G~S~~~v~rl~~~~~~-----~~~~lk~~~~~----~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l 102 (272)
T 4gkh_A 32 DNVGQSGATIYRLYGKPNA-----PELFLKHGKGS----VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAI 102 (272)
T ss_dssp EECSSSSCEEEEEECCTTC-----CCEEEEEEETH----HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECC
T ss_pred ccCCCcCCeEEEEEecCCC-----eEEEEEECCCC----CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEee
Confidence 4455555 68988776554 57888876542 2267889999999884 334678899999999999999999
Q ss_pred cCCcHHHHH
Q 007935 428 RNGSLYAAL 436 (584)
Q Consensus 428 ~~GsL~~~L 436 (584)
++.++.+..
T Consensus 103 ~G~~~~~~~ 111 (272)
T 4gkh_A 103 PGKTAFQVL 111 (272)
T ss_dssp CSEEHHHHH
T ss_pred CCccccccc
Confidence 998876543
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=93.31 E-value=0.11 Score=52.64 Aligned_cols=76 Identities=8% Similarity=0.117 Sum_probs=50.2
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc------chhhHhHHHHHHHHHhcCC--Cc-eeeeeEEEEeCC
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA------TWRFKDFESEVEAIARVQH--PN-IVRLKAFYYAND 418 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~------~~~~~~f~~Ei~~l~~l~H--pn-IV~l~g~~~~~~ 418 (584)
+.+|.|..+.||++....++ +.|+||....... ....+++.+|.++++.+.+ |. +.+++.+ +.+
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~-----~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~ 108 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHD-----RALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTE 108 (397)
T ss_dssp EECCSSSSEEEEEEEC---------CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETT
T ss_pred EECCCCceEEEEEEEECCCC-----cEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCC
Confidence 46899999999999765433 6799998653211 1123567889999988742 44 3455543 456
Q ss_pred ceeEeeecccCC
Q 007935 419 EKLLISDFIRNG 430 (584)
Q Consensus 419 ~~~lV~Ey~~~G 430 (584)
..++||||+++.
T Consensus 109 ~~~lvmE~l~g~ 120 (397)
T 2olc_A 109 MAVTVMEDLSHL 120 (397)
T ss_dssp TTEEEECCCTTS
T ss_pred ccEEEEEeCCCc
Confidence 678999999864
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=93.04 E-value=0.21 Score=48.65 Aligned_cols=74 Identities=9% Similarity=0.052 Sum_probs=58.6
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcC---CCceeeeeEEEEeCCceeEee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ---HPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~---HpnIV~l~g~~~~~~~~~lV~ 424 (584)
..|+.|....+|+....+ ..++||+.... ....|.+|.+.|+.+. ...+.++++++...+..++||
T Consensus 42 ~~l~gG~~n~~y~v~~~~-------~~~vlK~~~~~----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvm 110 (312)
T 3jr1_A 42 EKLYSGEMNEIWLINDEV-------QTVFVKINERS----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLL 110 (312)
T ss_dssp EEECCSSSSEEEEEESSS-------CEEEEEEEEGG----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEE
T ss_pred EEeCCccceeeeEEEECC-------CeEEEEeCCcc----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEE
Confidence 357889999999987532 57788877542 1367899999998883 367889999988888899999
Q ss_pred ecccCCcH
Q 007935 425 DFIRNGSL 432 (584)
Q Consensus 425 Ey~~~GsL 432 (584)
||+++..+
T Consensus 111 e~l~G~~~ 118 (312)
T 3jr1_A 111 EALNKSKN 118 (312)
T ss_dssp ECCCCCCC
T ss_pred EeccCCCC
Confidence 99998865
|
| >2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.81 E-value=0.01 Score=38.31 Aligned_cols=28 Identities=29% Similarity=0.271 Sum_probs=14.9
Q ss_pred ccEEEeehhHHHHHHHHhhhheeeeehh
Q 007935 270 GSVVVSVISGVSVVVGVVSVSVWLFRRK 297 (584)
Q Consensus 270 ~~iv~~vv~~~~~vl~vv~~~~~~~~r~ 297 (584)
..|++++++|+++++++++..++++|||
T Consensus 10 ~aIA~gVVgGv~~v~ii~~~~~~~~RRR 37 (44)
T 2l2t_A 10 PLIAAGVIGGLFILVIVGLTFAVYVRRK 37 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ceEEEeehHHHHHHHHHHHHHHHHhhhh
Confidence 4566666666666554444444444433
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=92.48 E-value=0.34 Score=46.39 Aligned_cols=74 Identities=16% Similarity=0.255 Sum_probs=53.4
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCC---ceeeeeEEEEeCCceeEee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHP---NIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~Hp---nIV~l~g~~~~~~~~~lV~ 424 (584)
..+|.|..+.||+.+..++ +.|.||+...... .....|.+|+..|+.+.-- -+.+.+++ +..++||
T Consensus 21 ~~~g~G~~~~vyrv~l~DG------~~~~vK~~~~~~~-~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~ 89 (288)
T 3f7w_A 21 AERGHSHRWHLYRVELADG------TPLFVKALPDDAP-ALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAM 89 (288)
T ss_dssp EEEEEETTEEEEEEEETTS------CEEEEEECCTTCC-CCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEE
T ss_pred EecCCCCCeEEEEEEECCC------CEEEEEEeCCCCc-chhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEE
Confidence 4589999999999999887 7899998764322 2225688999999988421 34455543 2458999
Q ss_pred ecccCCcH
Q 007935 425 DFIRNGSL 432 (584)
Q Consensus 425 Ey~~~GsL 432 (584)
||++.+..
T Consensus 90 e~l~~~~~ 97 (288)
T 3f7w_A 90 EWVDERPP 97 (288)
T ss_dssp ECCCCCCC
T ss_pred EeecccCC
Confidence 99987754
|
| >3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A | Back alignment and structure |
|---|
Probab=91.65 E-value=0.022 Score=58.92 Aligned_cols=57 Identities=9% Similarity=0.045 Sum_probs=15.3
Q ss_pred CceEEEEEecCCCCCCCceEEEE------EEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEe
Q 007935 355 NGIMYKVVVGRGSGMGAPTVVAV------RRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYA 416 (584)
Q Consensus 355 ~g~Vy~~~~~~~~~~~~~~~vAv------K~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~ 416 (584)
||.||+|.+.... ..||| |..+... ..+..+.|.+|..++...+|||+++.+++...
T Consensus 152 fG~v~~g~~~~~~-----~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 152 YTTLNREPAYKKH-----MPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp BCCC--------------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred chhhhcccccccC-----CchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 9999999986532 57888 7776542 23334679999999999999999999998764
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=86.54 E-value=0.78 Score=44.31 Aligned_cols=74 Identities=9% Similarity=-0.003 Sum_probs=53.1
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCC---ceeeeeEEEE-eCCceeEe
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHP---NIVRLKAFYY-ANDEKLLI 423 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~Hp---nIV~l~g~~~-~~~~~~lV 423 (584)
..++.|....||+. + ..++||.... ......+.+|+++|..+.+. .+.+.+.++. ..+..++|
T Consensus 25 ~~l~~G~~n~v~~v----g------~~~VlR~~~~---~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v 91 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----N------GDWVFRFPKS---QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVG 91 (306)
T ss_dssp EEEEECSSEEEEEE----T------TTEEEEEESS---HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEE
T ss_pred eecCCCcceeEEEE----C------CEEEEEecCC---chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEE
Confidence 35778888899987 2 3577787532 22336789999999999653 3566777764 35568899
Q ss_pred eecccCCcHHH
Q 007935 424 SDFIRNGSLYA 434 (584)
Q Consensus 424 ~Ey~~~GsL~~ 434 (584)
|||++|..+.+
T Consensus 92 ~e~i~G~~l~~ 102 (306)
T 3tdw_A 92 YRKVQGQILGE 102 (306)
T ss_dssp EECCCSEECHH
T ss_pred EeccCCeECch
Confidence 99999987754
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=84.71 E-value=0.69 Score=45.69 Aligned_cols=85 Identities=9% Similarity=0.092 Sum_probs=54.3
Q ss_pred ec-eeecCceEEEEEecCC-CCCCCceEEEEEEecCCCc--chhhHhHHHHHHHHHhcC-C--CceeeeeEEEEeC---C
Q 007935 349 VV-GKSKNGIMYKVVVGRG-SGMGAPTVVAVRRLTEGDA--TWRFKDFESEVEAIARVQ-H--PNIVRLKAFYYAN---D 418 (584)
Q Consensus 349 ~i-G~G~~g~Vy~~~~~~~-~~~~~~~~vAvK~l~~~~~--~~~~~~f~~Ei~~l~~l~-H--pnIV~l~g~~~~~---~ 418 (584)
.| +.|....+|+...... .+......+++|....... ......+.+|+.+++.++ + -.+.++++++.+. +
T Consensus 27 ~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~g 106 (357)
T 3ats_A 27 GVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLG 106 (357)
T ss_dssp EECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTTS
T ss_pred ECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCccC
Confidence 46 7788889998876400 0000015788887654220 101256889999999884 3 3577888887655 3
Q ss_pred ceeEeeecccCCcHH
Q 007935 419 EKLLISDFIRNGSLY 433 (584)
Q Consensus 419 ~~~lV~Ey~~~GsL~ 433 (584)
..++||||++|..+.
T Consensus 107 ~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 107 TPFFLMDYVEGVVPP 121 (357)
T ss_dssp SCEEEEECCCCBCCC
T ss_pred CceEEEEecCCCChh
Confidence 578999999986543
|
| >2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A | Back alignment and structure |
|---|
Probab=81.78 E-value=0.1 Score=33.52 Aligned_cols=7 Identities=14% Similarity=0.629 Sum_probs=2.7
Q ss_pred EEEeehh
Q 007935 272 VVVSVIS 278 (584)
Q Consensus 272 iv~~vv~ 278 (584)
+++++++
T Consensus 14 Ia~~vVG 20 (44)
T 2jwa_A 14 IISAVVG 20 (44)
T ss_dssp HHHHHHH
T ss_pred hHHHHHH
Confidence 3333333
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 584 | ||||
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 7e-24 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 3e-23 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 1e-22 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 3e-22 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 5e-22 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 2e-21 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 7e-21 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 3e-20 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 7e-20 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 8e-20 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 2e-19 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 4e-19 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 6e-19 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 9e-19 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 1e-18 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 1e-18 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 1e-18 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 1e-18 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 6e-17 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 6e-12 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 2e-18 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 3e-18 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 1e-17 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 1e-17 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 3e-17 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 4e-17 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 6e-17 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 6e-17 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 1e-16 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 3e-16 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 4e-16 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 1e-13 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 3e-11 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 0.001 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 0.001 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 0.002 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 5e-16 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 9e-16 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 6e-15 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 9e-15 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 2e-14 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 4e-14 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 5e-14 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 3e-09 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 2e-13 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 1e-12 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 5e-12 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 7e-12 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 1e-11 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 1e-11 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 1e-11 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 1e-11 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 8e-09 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 3e-08 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 1e-06 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 2e-11 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 3e-11 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 3e-10 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 3e-11 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 5e-11 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 1e-08 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 6e-11 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 9e-11 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 1e-10 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 1e-10 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 3e-10 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 5e-10 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 7e-10 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 9e-10 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 6e-08 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 7e-04 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 0.001 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 1e-09 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 1e-09 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 1e-09 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 2e-09 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 7e-09 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 1e-08 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 1e-08 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 1e-07 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 2e-07 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 0.004 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 1e-09 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 6e-07 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 0.002 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 1e-09 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 2e-09 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 2e-08 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 2e-08 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 2e-08 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 2e-07 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 5e-07 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 2e-06 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 2e-05 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 7e-05 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 1e-04 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 0.001 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 0.001 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 2e-06 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 2e-06 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 4e-04 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 0.004 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 1e-05 | |
| d2ifga3 | 156 | c.10.2.7 (A:36-191) High affinity nerve growth fac | 2e-05 | |
| d2ifga3 | 156 | c.10.2.7 (A:36-191) High affinity nerve growth fac | 3e-04 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 4e-05 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 5e-05 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 9e-05 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 0.003 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 6e-05 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 9e-05 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 3e-04 | |
| d1w8aa_ | 192 | c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanoga | 0.001 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 0.002 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 0.002 |
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 98.9 bits (246), Expect = 7e-24
Identities = 62/290 (21%), Positives = 110/290 (37%), Gaps = 73/290 (25%)
Query: 334 GFSLELED--LLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKD 391
G++L +++ LL+ +GK + G + RG VAV+ + +
Sbjct: 1 GWALNMKELKLLQ----TIGKGEFGDVMLGDY-RG------NKVAVKCIKNDATA---QA 46
Query: 392 FESEVEAIARVQHPNIVRLKAFYYANDEKL-LISDFIRNGSLYAALHGFGLNRLLP---- 446
F +E + +++H N+V+L L ++++++ GSL L G + L
Sbjct: 47 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 106
Query: 447 ---------------------------------GTSKVTKNETIVTSGTGSRISAISNVY 473
+KV+ + + + +
Sbjct: 107 KFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKW 166
Query: 474 LAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPL 532
APEA + KF+ K DV+SFGI+L EI + GR+P P K + V K ++ P
Sbjct: 167 TAPEA-LREKKFSTKSDVWSFGILLWEIYSFGRVPY--PRIPLKDVVPRVEKGYKMDAP- 222
Query: 533 SEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582
+ PA+ + + NC LD RP + E L+ +K
Sbjct: 223 -DGCPPAVYE-------------VMKNCWHLDAAMRPSFLQLREQLEHIK 258
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 98.7 bits (245), Expect = 3e-23
Identities = 49/301 (16%), Positives = 92/301 (30%), Gaps = 72/301 (23%)
Query: 336 SLELEDLLRASAYVVGKSKNGIMYKVVVGRGS-----------GMGAPTVVAVRRLTEGD 384
+L E + V+G S + + V+GRG G AV+ L
Sbjct: 8 ALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT 67
Query: 385 ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK-LLISDFIRNGSLY---------- 433
F +E + HPN++ L ++ L++ ++++G L
Sbjct: 68 DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP 127
Query: 434 -------------AALHGFGLNRLLPGTSK-----VTKNETI---------------VTS 460
+ + + + + T+ S
Sbjct: 128 TVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS 187
Query: 461 GTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLES 520
+ + ++A E+ + KFT K DV+SFG++L E++T P
Sbjct: 188 VHNKTGAKLPVKWMALES-LQTQKFTTKSDVWSFGVLLWELMTRG----APPYPDVNTFD 242
Query: 521 LVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580
+ + RR L P + E + L C E RP + +
Sbjct: 243 ITVYLLQGRRLLQPEYCPDPLYE------------VMLKCWHPKAEMRPSFSELVSRISA 290
Query: 581 V 581
+
Sbjct: 291 I 291
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 95.5 bits (237), Expect = 1e-22
Identities = 44/273 (16%), Positives = 93/273 (34%), Gaps = 65/273 (23%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
+G + G+++ VA++ + EG + +DF E E + ++ HP +V
Sbjct: 12 EIGSGQFGLVHLGYWLNK------DKVAIKTIREGAMSE--EDFIEEAEVMMKLSHPKLV 63
Query: 409 RLKAFYYANDEKLLISDFIRNGSLY-----------------------AALHGFGLNRLL 445
+L L+ +F+ +G L + ++
Sbjct: 64 QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVI 123
Query: 446 PGTSK-----VTKNETIVTSGTGSRISAISNV------------YLAPEARIYGSKFTQK 488
V +N+ I S G + + + +PE S+++ K
Sbjct: 124 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEV-FSFSRYSSK 182
Query: 489 CDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKR 548
DV+SFG+++ E+ + ++ + +E + FR +P + +
Sbjct: 183 SDVWSFGVLMWEVFSEGKIPYENRSNSEVVE-DISTGFRLYKP--RLASTHVY------- 232
Query: 549 QVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
I +C + PE RP + L +
Sbjct: 233 ------QIMNHCWKERPEDRPAFSRLLRQLAEI 259
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 94.7 bits (235), Expect = 3e-22
Identities = 50/288 (17%), Positives = 93/288 (32%), Gaps = 85/288 (29%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRL-TEGDATWRFKDFESEVEAIARVQHPNI 407
+G G +YK VAV+ L + + F++EV + + +H NI
Sbjct: 15 RIGSGSFGTVYKGKWHGD--------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 66
Query: 408 VRLKAFYYANDEKLLISDFIRNGSLYAALHG----------------------------- 438
+ + + +++ + SLY LH
Sbjct: 67 LLFMGYST-APQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 125
Query: 439 ----------------------FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAP 476
FGL + S + E + G+ ++AP
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS--GSIL--------WMAP 175
Query: 477 EARIYGSK--FTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSE 534
E K ++ + DVY+FGIVL E++TG+LP + N + + + R P
Sbjct: 176 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG---YLSPDLS 232
Query: 535 VIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582
+ K + + C + + RP + S++ +
Sbjct: 233 KVRSNCPKAMK---------RLMAECLKKKRDERPLFPQILASIELLA 271
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 94.4 bits (234), Expect = 5e-22
Identities = 58/278 (20%), Positives = 106/278 (38%), Gaps = 65/278 (23%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+G + G + + VA++ L G + +DF SE + + HPN++
Sbjct: 33 VIGAGEFGEVCSGHLKLPGKREI--FVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 90
Query: 409 RLKAFYYANDEKLLISDFIRNGSLY--------------------------AALHGFGL- 441
L+ + ++I++F+ NGSL L
Sbjct: 91 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYV 150
Query: 442 -------NRLL----------PGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSK 484
N L+ G S+ +++T + T + I + APEA I K
Sbjct: 151 HRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEA-IQYRK 209
Query: 485 FTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKE 543
FT DV+S+GIV+ E+++ G P N + + + + + +R P+ AL
Sbjct: 210 FTSASDVWSYGIVMWEVMSYGERPYWDMTN--QDVINAIEQDYRLPPPMD--CPSALH-- 263
Query: 544 IHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
+ L+C + D RP+ + +LD++
Sbjct: 264 -----------QLMLDCWQKDRNHRPKFGQIVNTLDKM 290
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 92.6 bits (229), Expect = 2e-21
Identities = 46/298 (15%), Positives = 94/298 (31%), Gaps = 71/298 (23%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
+GK + G +++ G+ G VAV+ + + R E+E+ ++H NI+
Sbjct: 10 SIGKGRFGEVWR---GKWRG----EEVAVKIFSSREE--RSWFREAEIYQTVMLRHENIL 60
Query: 409 RLKAFYYANDEKL----LISDFIRNGSLYAALHGFGL----------------------- 441
A ++ L+SD+ +GSL+ L+ + +
Sbjct: 61 GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEI 120
Query: 442 -----------------NRLL--PGTSKVT-------KNETIVTSGTGSRISAISNVYLA 475
N L+ GT + + T + Y+A
Sbjct: 121 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 180
Query: 476 PEA-----RIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE-- 528
PE + + ++ D+Y+ G+V EI E+ LV
Sbjct: 181 PEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEE 240
Query: 529 --RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKLQ 584
+ + + P + + + I C + R + ++L ++ Q
Sbjct: 241 MRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 90.7 bits (224), Expect = 7e-21
Identities = 55/276 (19%), Positives = 100/276 (36%), Gaps = 64/276 (23%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+G + G +YK ++ + S VA++ L G + DF E + + H NI+
Sbjct: 14 VIGAGEFGEVYKGML-KTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 72
Query: 409 RLKAFYYANDEKLLISDFIRNGS--------------------------LYAALHGFGL- 441
RL+ ++I++++ NG+ L
Sbjct: 73 RLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYV 132
Query: 442 -------NRLL----------PGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSK 484
N L+ G S+V +++ T T I + APEA I K
Sbjct: 133 HRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIR--WTAPEA-ISYRK 189
Query: 485 FTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEI 544
FT DV+SFGIV+ E++T ++ + ++++ R P A+
Sbjct: 190 FTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIND---GFRLPTPMDCPSAIY--- 243
Query: 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580
+ + C + + RP+ + LD+
Sbjct: 244 ----------QLMMQCWQQERARRPKFADIVSILDK 269
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 88.6 bits (219), Expect = 3e-20
Identities = 43/271 (15%), Positives = 89/271 (32%), Gaps = 67/271 (24%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
+G + G++ VA++ + EG + +F E + + + H +V
Sbjct: 11 ELGTGQFGVVKYGKWRGQ------YDVAIKMIKEGSMSE--DEFIEEAKVMMNLSHEKLV 62
Query: 409 RLKAFYYANDEKLLISDFIRNGSLY--------------------------AALHGFGL- 441
+L +I++++ NG L L
Sbjct: 63 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL 122
Query: 442 -------NRLL--PGTSKVTKNETIVTSGTGSRISAISNV----YLAPEARIYGSKFTQK 488
N L+ G KV+ S++ + + PE + SKF+ K
Sbjct: 123 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPE-VLMYSKFSSK 181
Query: 489 CDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAK 547
D+++FG+++ EI + G++P N + + R RP + +
Sbjct: 182 SDIWAFGVLMWEIYSLGKMPYERFTNS--ETAEHIAQGLRLYRP--HLASEKVY------ 231
Query: 548 RQVLATFHIALNCTELDPEFRPRMRTVSESL 578
I +C + RP + + ++
Sbjct: 232 -------TIMYSCWHEKADERPTFKILLSNI 255
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 88.6 bits (219), Expect = 7e-20
Identities = 52/280 (18%), Positives = 89/280 (31%), Gaps = 59/280 (21%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
+G G+++KV + SG V+A + + E++ + P IV
Sbjct: 13 ELGAGNGGVVFKVSH-KPSG----LVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHGFGL--------------------------- 441
+Y++ E + + + GSL L G
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIM 127
Query: 442 -------NRLLP----------GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSK 484
N L+ G S + ++ S G+R Y++PE R+ G+
Sbjct: 128 HRDVKPSNILVNSRGEIKLCDFGVSGQLID-SMANSFVGTRS------YMSPE-RLQGTH 179
Query: 485 FTQKCDVYSFGIVLLEILTGRLPDAGP--ENDGKGLESLVRKAFRERRPLSEVIDPALVK 542
++ + D++S G+ L+E+ GR P P + V E P L
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSS 239
Query: 543 EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582
R +A F + P P E D V
Sbjct: 240 YGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVN 279
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 87.4 bits (216), Expect = 8e-20
Identities = 56/283 (19%), Positives = 89/283 (31%), Gaps = 89/283 (31%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
+G + G ++ T VAV+ L +G + F +E + ++QH +V
Sbjct: 20 RLGAGQFGEVWMGYYNGH------TKVAVKSLKQGSMSP--DAFLAEANLMKQLQHQRLV 71
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHG------------------------------ 438
RL A + +I++++ NGSL L
Sbjct: 72 RLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 130
Query: 439 ----------------------FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAP 476
FGL RL+ + + AP
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK-----------WTAP 179
Query: 477 EARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVI 536
EA I FT K DV+SFGI+L EI+T P + + + +R RP +
Sbjct: 180 EA-INYGTFTIKSDVWSFGILLTEIVTHGRI-PYPGMTNPEVIQNLERGYRMVRP--DNC 235
Query: 537 DPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579
L + C + PE RP + L+
Sbjct: 236 PEELY-------------QLMRLCWKERPEDRPTFDYLRSVLE 265
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 86.2 bits (213), Expect = 2e-19
Identities = 53/286 (18%), Positives = 100/286 (34%), Gaps = 85/286 (29%)
Query: 350 VGKSKNG--IMYKVVVGRGSGMGA---------PTVVAVRRLTEGDATWRFKD-FESEVE 397
VG S +G + + + +GRG VA L + T + F+ E E
Sbjct: 2 VGMSNDGRFLKFDIEIGRG-SFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAE 60
Query: 398 AIARVQHPNIVRLKAFYYANDEK----LLISDFIRNGSLYAALHGFGL------------ 441
+ +QHPNIVR + + + +L+++ + +G+L L F +
Sbjct: 61 MLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQ 120
Query: 442 -----------------------NRLLPGTSKVTK----------NETIVTSGTGSRISA 468
N + G + K + + G+
Sbjct: 121 ILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPE-- 178
Query: 469 ISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE 528
++APE +Y K+ + DVY+FG+ +LE+ T P + +N + R+
Sbjct: 179 ----FMAPE--MYEEKYDESVDVYAFGMCMLEMATSEYPYSECQN----AAQIYRRVTSG 228
Query: 529 RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 574
+P S D + E+ I C + + R ++ +
Sbjct: 229 VKPAS--FDKVAIPEVK---------EIIEGCIRQNKDERYSIKDL 263
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 85.5 bits (211), Expect = 4e-19
Identities = 50/304 (16%), Positives = 93/304 (30%), Gaps = 91/304 (29%)
Query: 327 KFFIIDEGFSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT 386
K F+ + + +L G G + + V R VA++ L +G
Sbjct: 2 KLFLKRDNLLIADIEL--------GCGNFGSVRQGVY-RMRKKQ--IDVAIKVLKQGTEK 50
Query: 387 WRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHG-------- 438
++ E + + ++ +P IVRL + +L+ + G L+ L G
Sbjct: 51 ADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AEALMLVMEMAGGGPLHKFLVGKREEIPVS 109
Query: 439 -------------------------------------------FGLNRLLPGTSKVTKNE 455
FGL++ L
Sbjct: 110 NVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTAR 169
Query: 456 TIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPEND 514
+ + APE I KF+ + DV+S+G+ + E L+ G+ P +
Sbjct: 170 SAGKWPLK---------WYAPEC-INFRKFSSRSDVWSYGVTMWEALSYGQKPY--KKMK 217
Query: 515 GKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 574
G + + + + +R P L + +C E RP TV
Sbjct: 218 GPEVMAFIEQG--KRMECPPECPPELY-------------ALMSDCWIYKWEDRPDFLTV 262
Query: 575 SESL 578
+ +
Sbjct: 263 EQRM 266
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 85.5 bits (211), Expect = 6e-19
Identities = 46/272 (16%), Positives = 89/272 (32%), Gaps = 72/272 (26%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+G + + + +VA++ + + + E+E+ + +++HPNIV
Sbjct: 16 VLGTGAFSEVILAE-DKRTQ----KLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIV 70
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHGFG---------------------------- 440
L Y + LI + G L+ + G
Sbjct: 71 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVH 130
Query: 441 --------LNRLLP----------GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYG 482
L L G SK+ +++++ G+ Y+APE +
Sbjct: 131 RDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPG------YVAPE-VLAQ 183
Query: 483 SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVK 542
+++ D +S G++ +L G P END K E +++ + P + I +
Sbjct: 184 KPYSKAVDCWSIGVIAYILLCGYPPFYD-ENDAKLFEQILKAEYEFDSPYWDDISDSAK- 241
Query: 543 EIHAKRQVLATFHIALNCTELDPEFRPRMRTV 574
+ E DPE R
Sbjct: 242 ------------DFIRHLMEKDPEKRFTCEQA 261
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 84.4 bits (208), Expect = 9e-19
Identities = 48/281 (17%), Positives = 80/281 (28%), Gaps = 69/281 (24%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWR--FKDFESEVEAIARVQHPN 406
+G G++ + SG VAV+ L + DF EV A+ + H N
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKT--VSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 407 IVRLKAFYYANDEKLLISDFIRNGSLY--------------------------AALHGFG 440
++RL ++++ GSL L
Sbjct: 73 LIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR 131
Query: 441 L--------NRLL----------PGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYG 482
N LL G + R +
Sbjct: 132 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPF---AWCAPESLKT 188
Query: 483 SKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALV 541
F+ D + FG+ L E+ T G+ P G N + L + ++ R RP E +
Sbjct: 189 RTFSHASDTWMFGVTLWEMFTYGQEPWIG-LNGSQILHKIDKEGERLPRP--EDCPQDIY 245
Query: 542 KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582
++ + C PE RP + + L +
Sbjct: 246 -------------NVMVQCWAHKPEDRPTFVALRDFLLEAQ 273
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 84.0 bits (207), Expect = 1e-18
Identities = 51/273 (18%), Positives = 87/273 (31%), Gaps = 60/273 (21%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
+G+ + G +++ + VA++ + + F E + + HP+IV
Sbjct: 14 CIGEGQFGDVHQGIYMSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 71
Query: 409 RLKAFYYANDEKLLISDFIRNGSLY-----------------------AALHGFGLNRLL 445
+L + +I + G L AL R +
Sbjct: 72 KLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFV 130
Query: 446 PGTSK-----VTKNETIVTSGTG-SRISAISNV-----------YLAPEARIYGSKFTQK 488
V+ N+ + G SR S ++APE+ I +FT
Sbjct: 131 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES-INFRRFTSA 189
Query: 489 CDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKR 548
DV+ FG+ + EIL + P K + + R ER P+ P L
Sbjct: 190 SDVWMFGVCMWEILMHGVK---PFQGVKNNDVIGRIENGERLPMPPNCPPTLY------- 239
Query: 549 QVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
+ C DP RPR + L +
Sbjct: 240 ------SLMTKCWAYDPSRRPRFTELKAQLSTI 266
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 84.3 bits (208), Expect = 1e-18
Identities = 40/263 (15%), Positives = 85/263 (32%), Gaps = 59/263 (22%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
+G+ +G +Y + +G VA+R++ + + +E+ + ++PNIV
Sbjct: 27 KIGQGASGTVYTAM-DVATG----QEVAIRQMNLQQQPKK-ELIINEILVMRENKNPNIV 80
Query: 409 RLKAFYYANDEKLLISDFIRNGSLY------------------------AALHGFGL--N 442
Y DE ++ +++ GSL LH +
Sbjct: 81 NYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHR 140
Query: 443 RLLPGTSKVTKNETIVTSGTGSRISAISNV-----------YLAPEARIYGSKFTQKCDV 491
+ + + ++ + G ++APE + + K D+
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPE-VVTRKAYGPKVDI 199
Query: 492 YSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVL 551
+S GI+ +E++ G P EN + L + E +
Sbjct: 200 WSLGIMAIEMIEGEPPYLN-ENPLRALYLIATNG-TPELQNPEKLSAIFR---------- 247
Query: 552 ATFHIALNCTELDPEFRPRMRTV 574
C ++D E R + +
Sbjct: 248 ---DFLNRCLDMDVEKRGSAKEL 267
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 84.0 bits (207), Expect = 1e-18
Identities = 45/262 (17%), Positives = 71/262 (27%), Gaps = 62/262 (23%)
Query: 360 KVVVGRGSGMGAPTVVAVRRLTEGDATWRFKD-FESEVEAIARVQHPNIVRLKAFYYAND 418
V G VAV+ L KD +E + ++ +P IVR+ +
Sbjct: 22 TVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AE 80
Query: 419 EKLLISDFIRNGSLY-------------------------AALHGFGLNR--LLPGTSKV 451
+L+ + G L L L +
Sbjct: 81 SWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL 140
Query: 452 TKNETI--------------VTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIV 497
+ APE I KF+ K DV+SFG++
Sbjct: 141 VTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE-CINYYKFSSKSDVWSFGVL 199
Query: 498 LLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHI 556
+ E + G+ P G G + +++ K ER + +
Sbjct: 200 MWEAFSYGQKPYRG--MKGSEVTAMLEKG--ERMGCPAGCPREMY-------------DL 242
Query: 557 ALNCTELDPEFRPRMRTVSESL 578
C D E RP V L
Sbjct: 243 MNLCWTYDVENRPGFAAVELRL 264
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 84.8 bits (208), Expect = 1e-18
Identities = 64/188 (34%), Positives = 85/188 (45%), Gaps = 13/188 (6%)
Query: 18 LCFSLNQDGLALLALKAAIAQDPTRALDSWSES-DSTPCHWSGIHCIRN----RVTSLYL 72
LC QD ALL +K + +PT L SW + D W G+ C + RV +L L
Sbjct: 2 LC--NPQDKQALLQIKKDL-GNPT-TLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDL 57
Query: 73 PNRNLTGYM--PSELGLLNSLTRLSLASN-NFSKPIPANLFNATNLVYLDLAHNSFCGPI 129
NL PS L L L L + N PIP + T L YL + H + G I
Sbjct: 58 SGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAI 117
Query: 130 PDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMV 189
PD + +K L LD S N L+G+LP + L L G N+ SG IP+ YG F +
Sbjct: 118 PDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGI-TFDGNRISGAIPDSYGSFSKLF 176
Query: 190 SLDLRNNN 197
+ + N
Sbjct: 177 TSMTISRN 184
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 79.8 bits (195), Expect = 6e-17
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 168 NLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGLCGFPL 227
+L N+ G +P+ + SL++ NNL GEIPQ G+L +A++ N LCG PL
Sbjct: 250 DLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPL 309
Query: 228 QSPC 231
C
Sbjct: 310 -PAC 312
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 64.4 bits (155), Expect = 6e-12
Identities = 25/110 (22%), Positives = 44/110 (40%), Gaps = 3/110 (2%)
Query: 47 WSESDSTPCHWSGIHCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIP 106
S + + + ++ T +N + ++GL +L L L +N +P
Sbjct: 202 VDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLP 261
Query: 107 ANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSN-LLNGS-LP 154
L L L+++ N+ CG IP L+ ++N L GS LP
Sbjct: 262 QGLTQLKFLHSLNVSFNNLCGEIPQ-GGNLQRFDVSAYANNKCLCGSPLP 310
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 84.1 bits (207), Expect = 2e-18
Identities = 53/290 (18%), Positives = 101/290 (34%), Gaps = 72/290 (24%)
Query: 342 LLRASAY----VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVE 397
+L+ + + V+G G +YK + G VA++ L E + K+ E
Sbjct: 5 ILKETEFKKIKVLGSGAFGTVYKGLW-IPEGEKVKIPVAIKELREATSPKANKEILDEAY 63
Query: 398 AIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL------------------YAALHGF 439
+A V +P++ RL LI+ + G L +
Sbjct: 64 VMASVDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 122
Query: 440 GL----------------NRLL----------PGTSKVTKNETIVTSGTGSRISAISNVY 473
G+ N L+ G +K+ E G ++ +
Sbjct: 123 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK---W 179
Query: 474 LAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPL 532
+A E+ I +T + DV+S+G+ + E++T G P G + S++ K ER P
Sbjct: 180 MALES-ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--IPASEISSILEK--GERLPQ 234
Query: 533 SEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582
+ + + I + C +D + RP+ R + ++
Sbjct: 235 PPICTIDV-------------YMIMVKCWMIDADSRPKFRELIIEFSKMA 271
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 83.7 bits (206), Expect = 3e-18
Identities = 51/287 (17%), Positives = 95/287 (33%), Gaps = 74/287 (25%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNI 407
V+G+ G + K R G A++R+ E + +DF E+E + ++ HPNI
Sbjct: 17 VIGEGNFGQVLK---ARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 73
Query: 408 VRLKAFYYANDEKLLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRIS 467
+ L L ++ +G+L L + P + + ++S +
Sbjct: 74 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 133
Query: 468 A---------------------------------ISNVYLA------------------- 475
A I++ L+
Sbjct: 134 ADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWM 193
Query: 476 PEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSE 534
+ S +T DV+S+G++L EI++ G P G L + + +R +PL+
Sbjct: 194 AIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG--MTCAELYEKLPQGYRLEKPLN- 250
Query: 535 VIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
D + + C P RP + SL+R+
Sbjct: 251 -CDDEVY-------------DLMRQCWREKPYERPSFAQILVSLNRM 283
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 81.3 bits (200), Expect = 1e-17
Identities = 51/275 (18%), Positives = 90/275 (32%), Gaps = 73/275 (26%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
+G+ G ++ T VA++ L G + + F E + + +++H +V
Sbjct: 24 KLGQGCFGEVWMGTWNGT------TRVAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLV 75
Query: 409 RLKAFYYANDEKLLISDFIRNGSLY---------------------------AALHGFGL 441
+L A + ++++++ GSL A +
Sbjct: 76 QLYAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY 134
Query: 442 --------NRLL--PGTSKVT-------KNETIVTSGTGSRISAISNVYLAPEARIYGSK 484
N L+ KV + T+ G++ + APEA +
Sbjct: 135 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI---KWTAPEA-ALYGR 190
Query: 485 FTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEI 544
FT K DV+SFGI+L E+ T P E L + R P +L
Sbjct: 191 FTIKSDVWSFGILLTELTTKGRV---PYPGMVNREVLDQVERGYRMPCPPECPESLH--- 244
Query: 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579
+ C +PE RP + L+
Sbjct: 245 ----------DLMCQCWRKEPEERPTFEYLQAFLE 269
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 80.4 bits (198), Expect = 1e-17
Identities = 52/278 (18%), Positives = 96/278 (34%), Gaps = 66/278 (23%)
Query: 335 FSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA--TWRFKDF 392
++LE ++ R +GK K G +Y + S ++A++ L +
Sbjct: 3 WALEDFEIGR----PLGKGKFGNVYLARE-KQSK----FILALKVLFKAQLEKAGVEHQL 53
Query: 393 ESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHGFGL----------- 441
EVE + ++HPNI+RL +++ LI ++ G++Y L
Sbjct: 54 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 113
Query: 442 ----------------------NRLL--PGTSKVTKNETIVTSGTGSRISAI-SNVYLAP 476
N LL G K+ V + + R + + YL P
Sbjct: 114 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPP 173
Query: 477 EARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVI 536
E I G +K D++S G++ E L G+ P + + ++ R + +
Sbjct: 174 E-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP-----FEANTYQETYKRISRVEFTFPDFV 227
Query: 537 DPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 574
+ + +P RP +R V
Sbjct: 228 TEGAR-------------DLISRLLKHNPSQRPMLREV 252
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 80.2 bits (197), Expect = 3e-17
Identities = 49/273 (17%), Positives = 92/273 (33%), Gaps = 63/273 (23%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
+G + G +Y+ V + VAV+ L E ++F E + ++HPN+V
Sbjct: 24 KLGGGQYGEVYEGVW-KKYS----LTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLV 76
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHGFGL--------------------------- 441
+L +I++F+ G+L L
Sbjct: 77 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 136
Query: 442 --------NRLL--PGTSKVT---KNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQK 488
N L+ KV + + + A + + +KF+ K
Sbjct: 137 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 196
Query: 489 CDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKR 548
DV++FG++L EI T + P D + L+ K +R RP E +
Sbjct: 197 SDVWAFGVLLWEIATYGMSPY-PGIDLSQVYELLEKDYRMERP--EGCPEKVY------- 246
Query: 549 QVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
+ C + +P RP + ++ + +
Sbjct: 247 ------ELMRACWQWNPSDRPSFAEIHQAFETM 273
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 80.3 bits (197), Expect = 4e-17
Identities = 43/280 (15%), Positives = 83/280 (29%), Gaps = 67/280 (23%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
+G+ G++Y+ V T VA++ + E + +F +E + ++V
Sbjct: 27 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 86
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHGFGL--------------------------- 441
RL L+I + + G L + L
Sbjct: 87 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 146
Query: 442 ----------------NRLLP--GTSKVTKNETIVTSGTGSRISAISNV-----YLAPEA 478
N ++ T K+ +++PE+
Sbjct: 147 AYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPES 206
Query: 479 RIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDP 538
+ FT DV+SFG+VL EI T ++ + L ++ +
Sbjct: 207 -LKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG---GLLDKPDNCPD 262
Query: 539 ALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 578
L F + C + +P+ RP + S+
Sbjct: 263 ML-------------FELMRMCWQYNPKMRPSFLEIISSI 289
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 78.9 bits (194), Expect = 6e-17
Identities = 47/266 (17%), Positives = 85/266 (31%), Gaps = 60/266 (22%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
+G+ G + V R + VAV+ + A ++ + E+ + H N+V
Sbjct: 12 TLGEGAYGEVQLAVN-RVTE----EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 66
Query: 409 RLKAFYYANDEKLLISDFIRNGSLY-------------------------AALHGFGL-- 441
+ + + L ++ G L+ LHG G+
Sbjct: 67 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH 126
Query: 442 ------NRLL--PGTSKVTKNETIVTSGTGSRISAISNV-----YLAPEARIYGSKFTQK 488
N LL K++ +R ++ + Y+APE +
Sbjct: 127 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 186
Query: 489 CDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKR 548
DV+S GIVL +L G LP P + + K + + ID A + +H
Sbjct: 187 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK--KTYLNPWKKIDSAPLALLHK-- 242
Query: 549 QVLATFHIALNCTELDPEFRPRMRTV 574
+P R + +
Sbjct: 243 -----------ILVENPSARITIPDI 257
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 79.7 bits (196), Expect = 6e-17
Identities = 41/264 (15%), Positives = 88/264 (33%), Gaps = 59/264 (22%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRL--TEGDATWRFKDFESEVEAIARVQHPN 406
+G G +Y + VVA++++ + + +++D EV + +++HPN
Sbjct: 22 EIGHGSFGAVYFAR-DVRNS----EVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 407 IVRLKAFYYANDEKLLISDFIRNGSLY-------------------------AALHGFGL 441
++ + Y L+ ++ + A LH +
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNM 136
Query: 442 --NRLLPGTSKVTKNETIVTSGTG-SRISAISNV------YLAPE--ARIYGSKFTQKCD 490
+ G +++ + G + I A +N ++APE + ++ K D
Sbjct: 137 IHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVD 196
Query: 491 VYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQV 550
V+S GI +E+ + P + +L A E L +
Sbjct: 197 VWSLGITCIELAERKPPLFNMNA----MSALYHIAQNESPALQSGHWSEYFRN------- 245
Query: 551 LATFHIALNCTELDPEFRPRMRTV 574
+C + P+ RP +
Sbjct: 246 -----FVDSCLQKIPQDRPTSEVL 264
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 79.0 bits (194), Expect = 1e-16
Identities = 38/266 (14%), Positives = 84/266 (31%), Gaps = 61/266 (22%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
+G G++++V R +G A + + + + + E++ ++ ++HP +V
Sbjct: 33 ELGTGAFGVVHRVTE-RATG----NNFAAKFVMTPHESDK-ETVRKEIQTMSVLRHPTLV 86
Query: 409 RLKAFYYANDEKLLISDFIRNGSLY--------------------------AALHGFGL- 441
L + ++E ++I +F+ G L+ +H
Sbjct: 87 NLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYV 146
Query: 442 -------NRLL----PGTSKVTK--NETIVTSGTGSRISAISNVYLAPEARIYGSKFTQK 488
N + K+ + +++ + + APE G
Sbjct: 147 HLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPE-VAEGKPVGYY 205
Query: 489 CDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKR 548
D++S G++ +L+G P G END + L ++ + I
Sbjct: 206 TDMWSVGVLSYILLSGLSPFGG-ENDDETLRNVKSCDWNMDDSAFSGISEDGK------- 257
Query: 549 QVLATFHIALNCTELDPEFRPRMRTV 574
DP R +
Sbjct: 258 ------DFIRKLLLADPNTRMTIHQA 277
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 78.2 bits (192), Expect = 3e-16
Identities = 37/266 (13%), Positives = 89/266 (33%), Gaps = 61/266 (22%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
+G G++++ V + +G V + + + ++E+ + ++ HP ++
Sbjct: 36 ELGSGAFGVVHRCVE-KATG----RVFVAKFINTPYPLDK-YTVKNEISIMNQLHHPKLI 89
Query: 409 RLKAFYYANDEKLLISDFIRNGSLY--------------------------AALHGFGL- 441
L + E +LI +F+ G L+ +H +
Sbjct: 90 NLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIV 149
Query: 442 -------NRLL----PGTSKVTK--NETIVTSGTGSRISAISNVYLAPEARIYGSKFTQK 488
N + + K+ T + +++ + + APE +
Sbjct: 150 HLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEI-VDREPVGFY 208
Query: 489 CDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKR 548
D+++ G++ +L+G P AG E+D + L+++ R + + P
Sbjct: 209 TDMWAIGVLGYVLLSGLSPFAG-EDDLETLQNVKRCDWEFDEDAFSSVSPEAK------- 260
Query: 549 QVLATFHIALNCTELDPEFRPRMRTV 574
N + +P R +
Sbjct: 261 ------DFIKNLLQKEPRKRLTVHDA 280
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 78.1 bits (191), Expect = 4e-16
Identities = 44/182 (24%), Positives = 59/182 (32%), Gaps = 31/182 (17%)
Query: 44 LDSWSESDSTPCHWSGI--HCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNF 101
L + +T S I I + L L L L L +LT L LA+N
Sbjct: 196 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQI 253
Query: 102 SKPIPANLFNATNLVYLDLAHNSFCGPIP--------------------DRIKTLKNLTH 141
S P L T L L L N P I LKNLT+
Sbjct: 254 SNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTY 311
Query: 142 LDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGE 201
L L N ++ P + L L L + N+ S + + L +N +S
Sbjct: 312 LTLYFNNISDISP--VSSLTKLQ-RLFFANNKVSD--VSSLANLTNINWLSAGHNQISDL 366
Query: 202 IP 203
P
Sbjct: 367 TP 368
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 70.4 bits (171), Expect = 1e-13
Identities = 24/93 (25%), Positives = 36/93 (38%), Gaps = 6/93 (6%)
Query: 55 CHWSGIHCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATN 114
+T L L N++ S + L L RL A+N S ++L N TN
Sbjct: 297 LEDISPISNLKNLTYLTLYFNNISD--ISPVSSLTKLQRLFFANNKVS--DVSSLANLTN 352
Query: 115 LVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSN 147
+ +L HN P + L +T L L+
Sbjct: 353 INWLSAGHNQISDLTP--LANLTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 63.1 bits (152), Expect = 3e-11
Identities = 28/118 (23%), Positives = 42/118 (35%), Gaps = 7/118 (5%)
Query: 55 CHWSGIHCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATN 114
S I + L S + L +LT L+L NN S P + + T
Sbjct: 273 NQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--VSSLTK 330
Query: 115 LVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFN 172
L L A+N + L N+ L N ++ P L +L +T L L+
Sbjct: 331 LQRLFFANNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRIT-QLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 39.6 bits (91), Expect = 0.001
Identities = 15/62 (24%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Query: 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNS 124
++VT+L + + LN+LT+++ ++N + P L N T LV + + +N
Sbjct: 44 DQVTTLQADRLGIKSI--DGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQ 99
Query: 125 FC 126
Sbjct: 100 IA 101
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 38.8 bits (89), Expect = 0.001
Identities = 13/112 (11%), Positives = 28/112 (25%), Gaps = 33/112 (29%)
Query: 96 LASNNFSKPIPAN-LF---NATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNG 151
L S ++ P N +F + L + + L +T L +
Sbjct: 1 LGSATITQDTPINQIFTDTALAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIK- 57
Query: 152 SLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIP 203
+ + + + ++ NN L+ P
Sbjct: 58 -------SIDGV-------------------EYLNNLTQINFSNNQLTDITP 83
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 38.4 bits (88), Expect = 0.002
Identities = 14/70 (20%), Positives = 24/70 (34%), Gaps = 10/70 (14%)
Query: 88 LNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHN---SFCGPIPDRIKTLKNLTHLDL 144
L + L N + + + + L S G ++ L NLT ++
Sbjct: 21 LAEKMKTVLGKTNVTDTVSQT--DLDQVTTLQADRLGIKSIDG-----VEYLNNLTQINF 73
Query: 145 SSNLLNGSLP 154
S+N L P
Sbjct: 74 SNNQLTDITP 83
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 76.2 bits (187), Expect = 5e-16
Identities = 42/276 (15%), Positives = 80/276 (28%), Gaps = 73/276 (26%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFK-DFESEVEAIARVQHPNI 407
+G G K+ + G ++ + L G T K SEV + ++HPNI
Sbjct: 11 TIGTGSYGRCQKIRR-KSDG----KILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI 65
Query: 408 VRL-KAFYYANDEKL-LISDFIRNGSLYAALHGFGLNR---------------------- 443
VR + L ++ ++ G L + + R
Sbjct: 66 VRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKEC 125
Query: 444 --------------LLPGTSKVTKNETIV-----------TSGTGSRISAISNVYLAPEA 478
L P + + + + ++ + Y++PE
Sbjct: 126 HRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQ 185
Query: 479 RIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDP 538
+ + +K D++S G +L E+ P K L +R+ + R +
Sbjct: 186 -MNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ--KELAGKIREG--KFRRIPYRYSD 240
Query: 539 ALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 574
L I L RP + +
Sbjct: 241 ELN-------------EIITRMLNLKDYHRPSVEEI 263
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 75.6 bits (185), Expect = 9e-16
Identities = 53/282 (18%), Positives = 90/282 (31%), Gaps = 75/282 (26%)
Query: 359 YKV--VVGRGSGMGA---------PTVVAVRRLTEGDATWR--FKDFESEVEAIARVQHP 405
Y++ ++G G GM VAV+ L A + F E + A + HP
Sbjct: 9 YELGEILGFG-GMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHP 67
Query: 406 NIVRLKAFYYANDEKL----LISDFIRNGSLYAALHGFGL-------------------- 441
IV + A ++ +++ +L +H G
Sbjct: 68 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFS 127
Query: 442 -------------NRLLPGTSKVTKNETIVTSGTGSRISAISNV--------YLAPEARI 480
N ++ T+ V + + ++++ YL+PE +
Sbjct: 128 HQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE-QA 186
Query: 481 YGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPAL 540
G + DVYS G VL E+LTG P G ++ VR+ E + L
Sbjct: 187 RGDSVDARSDVYSLGCVLYEVLTGEPPFTG-DSPVSVAYQHVREDPIPPSARHEGLSADL 245
Query: 541 VKEIHAKRQVLATFHIALNCTELDPEFRPR-MRTVSESLDRV 581
+ L +PE R + + L RV
Sbjct: 246 D-------------AVVLKALAKNPENRYQTAAEMRADLVRV 274
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 73.1 bits (179), Expect = 6e-15
Identities = 41/268 (15%), Positives = 75/268 (27%), Gaps = 73/268 (27%)
Query: 356 GIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYY 415
G KV + + A + + +D+ E++ +A HPNIV+L +Y
Sbjct: 23 GAFGKVYKAQNKETS--VLAAAKVIDTKSEEEL-EDYMVEIDILASCDHPNIVKLLDAFY 79
Query: 416 ANDEKLLISDFIRNGSLY--------------------------AALHGFGL-------- 441
+ ++ +F G++ LH +
Sbjct: 80 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAG 139
Query: 442 NRLL--PGTSKVT---------KNETIVTSGTGSRISAISNVYLAPEA----RIYGSKFT 486
N L G K+ + S G+ ++APE +
Sbjct: 140 NILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPY------WMAPEVVMCETSKDRPYD 193
Query: 487 QKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 546
K DV+S GI L+E+ P E + + + K+
Sbjct: 194 YKADVWSLGITLIEMAEIEPPH--HELNPMRVLLKIAKSEPPTLAQPSRWSSNFK----- 246
Query: 547 KRQVLATFHIALNCTELDPEFRPRMRTV 574
C E + + R +
Sbjct: 247 --------DFLKKCLEKNVDARWTTSQL 266
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 72.9 bits (178), Expect = 9e-15
Identities = 38/267 (14%), Positives = 78/267 (29%), Gaps = 56/267 (20%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
+G + ++ K A + RR +D E EV + +QHPN++
Sbjct: 17 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 76
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHGFG----------LNRLLPGTSKVTKNETI- 457
L Y + +LI + + G L+ L L ++L G + +
Sbjct: 77 TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 136
Query: 458 ------------------------------VTSGTGSRISAISNVYLAPEARIYGSKFTQ 487
+ G + + ++APE +
Sbjct: 137 FDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE-IVNYEPLGL 195
Query: 488 KCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAK 547
+ D++S G++ +L+G P G + + L ++ +
Sbjct: 196 EADMWSIGVITYILLSGASPFLG-DTKQETLANVSAVNYEFEDEYFSNTSALAK------ 248
Query: 548 RQVLATFHIALNCTELDPEFRPRMRTV 574
DP+ R ++
Sbjct: 249 -------DFIRRLLVKDPKKRMTIQDS 268
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 71.6 bits (175), Expect = 2e-14
Identities = 31/273 (11%), Positives = 73/273 (26%), Gaps = 86/273 (31%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATW--RFKDFESEVEAIARVQHPN 406
++G+ + + A++ L + + E + ++R+ HP
Sbjct: 15 ILGEGSFSTVVLAR-ELATS----REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 69
Query: 407 IVRLKAFYYANDEKLLISDFIRNGSLY--------------------------------- 433
V+L + +++ + +NG L
Sbjct: 70 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 129
Query: 434 -----------------AALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAP 476
+ FG ++L SK + + V + Y++P
Sbjct: 130 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ----------YVSP 179
Query: 477 EARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVI 536
E + + D+++ G ++ +++ G P + +K + E
Sbjct: 180 EL-LTEKSACKSSDLWALGCIIYQLVAGLPP-----FRAGNEYLIFQKIIKLEYDFPEKF 233
Query: 537 DPALVKEIHAKRQVLATFHIALNCTELDPEFRP 569
P + LD R
Sbjct: 234 FPKAR-------------DLVEKLLVLDATKRL 253
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 71.7 bits (175), Expect = 4e-14
Identities = 40/260 (15%), Positives = 75/260 (28%), Gaps = 51/260 (19%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
++G+ G +Y M A + +R+ + + ++ P IV
Sbjct: 11 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 70
Query: 409 RLKAFYYANDEKLLISDFIRNGSLY-------------------------AALHGFGL-- 441
+ ++ D+ I D + G L+ +H +
Sbjct: 71 CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVY 130
Query: 442 ------NRLL--PGTSKVTK-NETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVY 492
N LL G +++ S S ++ Y+APE G + D +
Sbjct: 131 RDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWF 190
Query: 493 SFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLA 552
S G +L ++L G P + K + R L + P L +
Sbjct: 191 SLGCMLFKLLRGHSPFRQ--HKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEG------ 242
Query: 553 TFHIALNCTELDPEFRPRMR 572
+ D R
Sbjct: 243 -------LLQRDVNRRLGCL 255
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 70.8 bits (172), Expect = 5e-14
Identities = 32/156 (20%), Positives = 52/156 (33%), Gaps = 17/156 (10%)
Query: 55 CHWSGIHCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATN 114
CH + C + + P +L L L +N ++ + N N
Sbjct: 10 CHLRVVQCSDLGLEKV-----------PKDLP--PDTALLDLQNNKITEIKDGDFKNLKN 56
Query: 115 LVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQF 174
L L L +N P L L L LS N L LPE + L + N+
Sbjct: 57 LHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPE---KMPKTLQELRVHENEI 112
Query: 175 SGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLN 210
+ ++ M+ ++L N L + G+
Sbjct: 113 TKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQG 148
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 56.2 bits (134), Expect = 3e-09
Identities = 34/162 (20%), Positives = 59/162 (36%), Gaps = 11/162 (6%)
Query: 44 LDSWSESDSTPCHWSGIHCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSK 103
++ + + +G +++ + + + N+T GL SLT L L N +K
Sbjct: 129 VELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQ---GLPPSLTELHLDGNKITK 185
Query: 104 PIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRAL 163
A+L NL L L+ NS + +L L L++N L P L D + +
Sbjct: 186 VDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKV-PGGLADHKYI 244
Query: 164 TGTLNLSFNQFSG------QIPEMYGHFPVMVSLDLRNNNLS 199
+ L N S P + L +N +
Sbjct: 245 Q-VVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQ 285
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 69.3 bits (169), Expect = 2e-13
Identities = 37/270 (13%), Positives = 83/270 (30%), Gaps = 65/270 (24%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
+G+ + GI+++ V S + + + E+ + +H NI+
Sbjct: 12 DLGRGEFGIVHRCV-ETSSK----KTYMAKFVKVKGTDQVL--VKKEISILNIARHRNIL 64
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAAL----------------------------HGFG 440
L + + +E ++I +FI ++ + H G
Sbjct: 65 HLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIG 124
Query: 441 LNRLLPGTSKVTKNET------------IVTSGTGSRISAISNVYLAPEARIYGSKFTQK 488
+ P + + G R+ + Y APE +
Sbjct: 125 HFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEV-HQHDVVSTA 183
Query: 489 CDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKR 548
D++S G ++ +L+G P E + + +E+++ + + I +
Sbjct: 184 TDMWSLGTLVYVLLSGINPFLA-ETNQQIIENIMNAEYTFDEEAFKEISIEAM------- 235
Query: 549 QVLATFHIALNCTELDPEFRPRMRTVSESL 578
+ + R T SE+L
Sbjct: 236 ------DFVDRLLVKERKSRM---TASEAL 256
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 66.8 bits (162), Expect = 1e-12
Identities = 43/290 (14%), Positives = 84/290 (28%), Gaps = 72/290 (24%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIAR-VQHPNI 407
+G+ G + + VAV+ L EG + SE++ + H N+
Sbjct: 20 PLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 79
Query: 408 VRLKAFYYANDEKLLI-SDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRI 466
V L L++ +F + G+L L + + + +T
Sbjct: 80 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 139
Query: 467 SA--------------------ISNVYLAPEARI-------------------------- 480
S N+ L+ + +
Sbjct: 140 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 199
Query: 481 ---------YGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP 531
+ +T + DV+SFG++L EI + + +++ R R P
Sbjct: 200 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 259
Query: 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
+ P + + L+C +P RP + E L +
Sbjct: 260 --DYTTPEMYQ-------------TMLDCWHGEPSQRPTFSELVEHLGNL 294
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 64.9 bits (157), Expect = 5e-12
Identities = 33/283 (11%), Positives = 73/283 (25%), Gaps = 75/283 (26%)
Query: 359 YKV--VVGRGSGMGA---------PTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNI 407
Y++ +G G G VA++ + E + +Q
Sbjct: 9 YRLGRKIGSG-SFGDIYLGTDIAAGEEVAIKLECVKT---KHPQLHIESKIYKMMQGGVG 64
Query: 408 VRLKAFYYANDEKLLISDFIRNGSLY--------------------------AALHGFG- 440
+ + A + ++ + SL +H
Sbjct: 65 IPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNF 124
Query: 441 --------------------LNRLLPGTSKVTKNETIVTSGTGSRISAI--SNVYLAPEA 478
+ + G +K ++ + + Y +
Sbjct: 125 IHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINT 184
Query: 479 RIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDP 538
G + +++ D+ S G VL+ G LP G + K + R + ++ EV+
Sbjct: 185 -HLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATK-RQKYERISEKKMSTPIEVLCK 242
Query: 539 ALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
E C L + +P + + +
Sbjct: 243 GYPSEFA---------TYLNFCRSLRFDDKPDYSYLRQLFRNL 276
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.0 bits (155), Expect = 7e-12
Identities = 40/261 (15%), Positives = 74/261 (28%), Gaps = 64/261 (24%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ--HPN 406
++G G +Y + + A V R+++ EV + +V
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 407 IVRLKAFYYANDEKLLISDFIRNGSL----------------------------YAALHG 438
++RL ++ D +LI + + G
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 130
Query: 439 FGLNRLLPGTSKVTKNETIV----------TSGTGSRISAISNVYLAPEARIYGSKFTQK 488
+ + N + T + VY PE Y +
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 190
Query: 489 CDVYSFGIVLLEILTGRLPDAGPENDGKG-----------LESLVRKAFR---ERRP--- 531
V+S GI+L +++ G +P E +G + L+R RP
Sbjct: 191 AAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFE 250
Query: 532 -------LSEVIDPALVKEIH 545
+ +V+ P EIH
Sbjct: 251 EIQNHPWMQDVLLPQETAEIH 271
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.0 bits (155), Expect = 1e-11
Identities = 38/262 (14%), Positives = 82/262 (31%), Gaps = 65/262 (24%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWR--FKDFESEVEAIARV-QHP 405
++GK G ++ + + A++ L + + E ++ +HP
Sbjct: 9 MLGKGSFGKVFLAEF-KKTN----QFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 63
Query: 406 NIVRLKAFYYANDEKLLISDFIRNGSLYAALH---GFGLNRLLPGTSKV----------- 451
+ + + + + +++ G L + F L+R +++
Sbjct: 64 FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG 123
Query: 452 -----TKNETIVTSGTGSRISAI-------------------SNVYLAPEARIYGSKFTQ 487
K + I+ G A + Y+APE + G K+
Sbjct: 124 IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEI-LLGQKYNH 182
Query: 488 KCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAK 547
D +SFG++L E+L G+ P G+ E L + ++
Sbjct: 183 SVDWWSFGVLLYEMLIGQSP-----FHGQDEEELFHSIRMDNPFYPRWLEKEAK------ 231
Query: 548 RQVLATFHIALNCTELDPEFRP 569
+ + +PE R
Sbjct: 232 -------DLLVKLFVREPEKRL 246
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 63.6 bits (154), Expect = 1e-11
Identities = 45/278 (16%), Positives = 81/278 (29%), Gaps = 65/278 (23%)
Query: 335 FSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWR--FKDF 392
+SL+ +LR +G G ++ + R +G A++ L + +
Sbjct: 1 YSLQDFQILR----TLGTGSFGRVHLIR-SRHNG----RYYAMKVLKKEIVVRLKQVEHT 51
Query: 393 ESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLY------------------- 433
E ++ V HP I+R+ + + +I D+I G L+
Sbjct: 52 NDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAA 111
Query: 434 ------AALHGFGL--------NRLL--PGTSKVTKNETIVTSGTGSRISAISNVYLAPE 477
LH + N LL G K+T + + Y+APE
Sbjct: 112 EVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPE 171
Query: 478 ARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVID 537
+ + + D +SFGI++ E+L G P K +
Sbjct: 172 V-VSTKPYNKSIDWWSFGILIYEMLAGYTP-----FYDSNTMKTYEKILNAELRFPPFFN 225
Query: 538 PALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVS 575
+ + D R
Sbjct: 226 EDVKDLLS-------------RLITRDLSQRLGNLQNG 250
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 63.3 bits (153), Expect = 1e-11
Identities = 45/280 (16%), Positives = 82/280 (29%), Gaps = 66/280 (23%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRF-KDFESEVEAIARVQHPNI 407
+G+ G++YK + +G VVA++++ T E+ + + HPNI
Sbjct: 9 KIGEGTYGVVYKAR-NKLTG----EVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 408 VRLKAFYYANDEKLLISDFIRNGSL------------------YAALHGFGLNRLL---- 445
V+L + ++ L+ +F+ Y GL
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 446 ------PGTSKVTKNETIVTSGTGSRISAISNV-----------YLAPEARIYGSKFTQK 488
P + I + G + V Y APE + ++
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA 183
Query: 489 CDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKR 548
D++S G + E++T R G + + FR EV+ P + K
Sbjct: 184 VDIWSLGCIFAEMVTRRALFPGDSE-----IDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 549 QVLATFHIALN----------------CTELDPEFRPRMR 572
+ DP R +
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 278
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 63.3 bits (152), Expect = 1e-11
Identities = 34/172 (19%), Positives = 47/172 (27%), Gaps = 1/172 (0%)
Query: 55 CHWSGIHCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATN 114
R+ +L+L L P L +L L L N + N
Sbjct: 95 SVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGN 154
Query: 115 LVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQF 174
L +L L N + L +L L L N + P DL L L N
Sbjct: 155 LTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTL-YLFANNL 213
Query: 175 SGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGLCGFP 226
S E + L L +N + S + C P
Sbjct: 214 SALPTEALAPLRALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPCSLP 265
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.8 bits (130), Expect = 8e-09
Identities = 38/184 (20%), Positives = 59/184 (32%), Gaps = 2/184 (1%)
Query: 47 WSESDSTPCHWSGIHCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIP 106
+ + + N L P+ L L L L + P
Sbjct: 63 LHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGP 122
Query: 107 ANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGT 166
L YL L N+ D + L NLTHL L N ++ L +L
Sbjct: 123 GLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLD-R 181
Query: 167 LNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPT-AFSGNPGLCGF 225
L L N+ + P + +++L L NNLS + + L + NP +C
Sbjct: 182 LLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDC 241
Query: 226 PLQS 229
+
Sbjct: 242 RARP 245
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.9 bits (125), Expect = 3e-08
Identities = 32/175 (18%), Positives = 43/175 (24%), Gaps = 30/175 (17%)
Query: 54 PCHWSGIHCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNAT 113
PC C + P + L +P + + R+ L N S A+
Sbjct: 1 PCP-GACVCYNEPKVTTSCPQQGLQ-AVPVGIP--AASQRIFLHGNRISHVPAASFRACR 56
Query: 114 NLVYLDLAHNSFCGPI-------------------------PDRIKTLKNLTHLDLSSNL 148
NL L L N P L L L L
Sbjct: 57 NLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCG 116
Query: 149 LNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIP 203
L P L AL L N + + + L L N +S
Sbjct: 117 LQELGPGLFRGLAALQYL-YLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPE 170
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.3 bits (113), Expect = 1e-06
Identities = 29/125 (23%), Positives = 37/125 (29%), Gaps = 8/125 (6%)
Query: 55 CHWSGIHCIRNRVTSL---YLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFN 111
S + SL L + P L L L L +NN S L
Sbjct: 164 RISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAP 223
Query: 112 ATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSF 171
L YL L N + R L SS+ + SLP+ L L+
Sbjct: 224 LRALQYLRLNDNPWVCDCRAR-PLWAWLQKFRGSSSEVPCSLPQRLAGRD----LKRLAA 278
Query: 172 NQFSG 176
N G
Sbjct: 279 NDLQG 283
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.9 bits (152), Expect = 2e-11
Identities = 54/289 (18%), Positives = 94/289 (32%), Gaps = 71/289 (24%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+G G++Y+ + SG +VA++++ + + E++ + ++ H NIV
Sbjct: 27 VIGNGSFGVVYQAKL-CDSG----ELVAIKKVLQDK-----RFKNRELQIMRKLDHCNIV 76
Query: 409 RLKAFYYANDEK------LLISDFIRNGSLYAALHGFGLNRLL----------------- 445
RL+ F+Y++ EK L+ D++ A H + L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 446 -------------PGTSKVTKNE-----------TIVTSGTGSRISAISNVYLAPEARIY 481
P + + + G + S Y APE
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 196
Query: 482 GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDG------KGLESLVRKAFRERRPLSEV 535
+ +T DV+S G VL E+L G+ G K L + R+ RE P
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE 256
Query: 536 IDPALVKEIHAKRQVLATF-----HIALNCTELDPEFRPRMRTVSESLD 579
+K + + E P R T E+
Sbjct: 257 FKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARL---TPLEACA 302
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 62.6 bits (151), Expect = 3e-11
Identities = 23/142 (16%), Positives = 44/142 (30%), Gaps = 27/142 (19%)
Query: 439 FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVL 498
FGL+R + + + P I+ +++T + DV+++G+VL
Sbjct: 184 FGLSRNIYSADYYKADGNDAIP-----------IRWMPPESIFYNRYTTESDVWAYGVVL 232
Query: 499 LEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIAL 558
EI + L + + + E L ++
Sbjct: 233 WEIFSYGLQPYYGMAHEEVIYYVRDG---NILACPENCPLELY-------------NLMR 276
Query: 559 NCTELDPEFRPRMRTVSESLDR 580
C P RP ++ L R
Sbjct: 277 LCWSKLPADRPSFCSIHRILQR 298
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 59.5 bits (143), Expect = 3e-10
Identities = 25/127 (19%), Positives = 48/127 (37%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
+G+ G +++ T+VAV+ L E + DF+ E +A +PNIV
Sbjct: 20 DIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIV 79
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISA 468
+L L+ +++ G L L + + + V+S +S
Sbjct: 80 KLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSC 139
Query: 469 ISNVYLA 475
+ +A
Sbjct: 140 AEQLCIA 146
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 62.0 bits (150), Expect = 3e-11
Identities = 37/278 (13%), Positives = 82/278 (29%), Gaps = 72/278 (25%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKD--------FESEVEAIA 400
++G+ + ++ + + + + AV+ + + EV+ +
Sbjct: 10 ILGRGVSSVVRRCIH-KPTC----KEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 64
Query: 401 RVQ-HPNIVRLKAFYYANDEKLLISDFIRNGSLY-------------------------A 434
+V HPNI++LK Y N L+ D ++ G L+
Sbjct: 65 KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVIC 124
Query: 435 ALHGFGL--------NRLL----------PGTSKVTKNETIVTSGTGSRISAISNVYLAP 476
ALH + N LL G S + G+ +
Sbjct: 125 ALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECS 184
Query: 477 EARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVI 536
+ + ++ D++S G+++ +L G P L ++ ++ P +
Sbjct: 185 MNDNHP-GYGKEVDMWSTGVIMYTLLAGSPPFWH-RKQMLMLRMIMSGNYQFGSPEWDDY 242
Query: 537 DPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 574
+ + + P+ R
Sbjct: 243 SDTVK-------------DLVSRFLVVQPQKRYTAEEA 267
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.7 bits (149), Expect = 5e-11
Identities = 21/108 (19%), Positives = 38/108 (35%), Gaps = 1/108 (0%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNI 407
+G G + + A VAV+ L + SE++ ++ + H NI
Sbjct: 30 TLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNI 89
Query: 408 VRLKAFYYANDEKLLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNE 455
V L L+I+++ G L L + + TS +
Sbjct: 90 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMED 137
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.4 bits (130), Expect = 1e-08
Identities = 22/108 (20%), Positives = 43/108 (39%), Gaps = 16/108 (14%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPL 532
++APE I+ +T + DV+S+GI L E+ + ++++ FR P
Sbjct: 213 WMAPE-SIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSP- 270
Query: 533 SEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580
E + I C + DP RP + + + +++
Sbjct: 271 -EHAPAEMY-------------DIMKTCWDADPLKRPTFKQIVQLIEK 304
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.8 bits (149), Expect = 6e-11
Identities = 32/211 (15%), Positives = 63/211 (29%), Gaps = 56/211 (26%)
Query: 359 YKV--VVGRGSGMGA---------PTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNI 407
Y +G G G VA+++++ + + E++ + R +H NI
Sbjct: 10 YTNLSYIGEG-AYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 68
Query: 408 VRLKAFYYANDEKLL-------------ISDFIRNGSL---------------YAALHGF 439
+ + A + + + ++ L +H
Sbjct: 69 IGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 128
Query: 440 GL--------NRLL--PGTSKVTKNE--TIVTSGTGSRISAISNV----YLAPEARIYGS 483
+ N LL K+ + V Y APE +
Sbjct: 129 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 188
Query: 484 KFTQKCDVYSFGIVLLEILTGRLPDAGPEND 514
+T+ D++S G +L E+L+ R G
Sbjct: 189 GYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 219
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.9 bits (147), Expect = 9e-11
Identities = 41/279 (14%), Positives = 77/279 (27%), Gaps = 48/279 (17%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNI 407
V+G G + S G VAV+ L E + + SE++ + ++ H NI
Sbjct: 44 VLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENI 103
Query: 408 VRLKAFYYANDEKLLISDFIRNGSLYAALHG----FGLNRLLPGTSKVTKNETIVTSGTG 463
V L + LI ++ G L L F + + K + E + T
Sbjct: 104 VNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTF 163
Query: 464 SRISAI-----------------------SNVYLAPEARIYGSKF-TQKCDVYSFGIVLL 499
+ NV + + F + + V+
Sbjct: 164 EDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVR 223
Query: 500 EILTGRLPDAGPEN--DGKGLESLVRKAF---------RERRPLSEVIDPALVKEIHAKR 548
+ PE+ +G ++ P + A ++
Sbjct: 224 GNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNG 283
Query: 549 QVL--------ATFHIALNCTELDPEFRPRMRTVSESLD 579
+ + I +C D RP ++ L
Sbjct: 284 FKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 322
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.6 bits (146), Expect = 1e-10
Identities = 41/283 (14%), Positives = 85/283 (30%), Gaps = 60/283 (21%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWR----FKDFESEVEAIARVQH 404
+G+ + +YK + + +VA++++ G + + E++ + + H
Sbjct: 5 FLGEGQFATVYKARD-KNTN----QIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH 59
Query: 405 PNIVRLKAFYYANDEKLLISDFIRNGSLY----------------------AALH----- 437
PNI+ L + L+ DF+ L
Sbjct: 60 PNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH 119
Query: 438 GFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNV-----------YLAPEARIYGSKFT 486
L P + +N + + G S S Y APE +
Sbjct: 120 WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYG 179
Query: 487 QKCDVYSFGIVLLEILTGRLPDAGPENDG------KGLESLVRKAFRERRPLSEVIDPAL 540
D+++ G +L E+L G + + L + + + + L + +
Sbjct: 180 VGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKS 239
Query: 541 VKEIHAKRQVLATFHIALN----CTELDPEFRPRMRTVSESLD 579
I A L+ +P R T +++L
Sbjct: 240 FPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARI---TATQALK 279
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.9 bits (147), Expect = 1e-10
Identities = 52/278 (18%), Positives = 90/278 (32%), Gaps = 71/278 (25%)
Query: 354 KNGIM--YKV---VVGRGSGMGAPTVVAVRRLTEGD--ATWRFKD---FESEVEAIARV- 402
KN I+ YKV V+G G G V+ + + A +D EVE R
Sbjct: 6 KNAIIDDYKVTSQVLGLG-ING--KVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS 62
Query: 403 QHPNIVRLKAFY---YANDEKL-LISDFIRNGSLY------------------------- 433
Q P+IVR+ Y YA + L ++ + + G L+
Sbjct: 63 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 122
Query: 434 --AALHGFGL--------NRLL-----PGTSKVTK--NETIVTSGTGSRISAISNVYLAP 476
LH + N L K+T TS + Y+AP
Sbjct: 123 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 182
Query: 477 EARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVI 536
E + K+ + CD++S G+++ +L G P + + + +
Sbjct: 183 EV-LGPEKYDKSCDMWSLGVIMYILLCGYPPFYS-NHGLAISPGMKTRIRMGQYEFPNPE 240
Query: 537 DPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 574
+ +E+ + N + +P R +
Sbjct: 241 WSEVSEEVK---------MLIRNLLKTEPTQRMTITEF 269
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 59.1 bits (142), Expect = 3e-10
Identities = 21/164 (12%), Positives = 50/164 (30%), Gaps = 18/164 (10%)
Query: 419 EKLLISDFIRNGSLYAALHGFGLNRLL-PGTSKVTKNETIVTSGTGSRISAISNVYLAPE 477
+ LI + + FG+ + +K + +G+ Y++
Sbjct: 130 DNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTAR------YMSIN 183
Query: 478 ARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVID 537
G + +++ D+ + G V + L G LP G + + R +++ +
Sbjct: 184 T-HLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATN-KQKYERIGEKKQSTPLRELC 241
Query: 538 PALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
+E + L + P + +V
Sbjct: 242 AGFPEEFY---------KYMHYARNLAFDATPDYDYLQGLFSKV 276
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.3 bits (140), Expect = 5e-10
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 19/110 (17%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
++APE ++ +T + DV+SFG++L EI T G P G + L L+++ R +P
Sbjct: 203 WMAPE-ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE--ELFKLLKEGHRMDKP 259
Query: 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
L + +C P RP + + E LDR+
Sbjct: 260 --SNCTNELY-------------MMMRDCWHAVPSQRPTFKQLVEDLDRI 294
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.2 bits (139), Expect = 7e-10
Identities = 18/102 (17%), Positives = 37/102 (36%), Gaps = 4/102 (3%)
Query: 92 TRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNG 151
L L N + L + ++ + P+ + + + H+DLS++++
Sbjct: 3 QTLDLTGKNLHPDVTGRLLSQ-GVIAFRCPRSFMDQPLAEHFSPFR-VQHMDLSNSVIEV 60
Query: 152 -SLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLD 192
+L L L L+L + S I +V L+
Sbjct: 61 STLHGILSQCSKLQ-NLSLEGLRLSDPIVNTLAKNSNLVRLN 101
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 58.3 bits (139), Expect = 9e-10
Identities = 20/110 (18%), Positives = 37/110 (33%), Gaps = 9/110 (8%)
Query: 54 PCHWSGIHCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNAT 113
I + + + + S L SL L++++N + +PA
Sbjct: 249 LDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIE-LPALP---P 304
Query: 114 NLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRAL 163
L L + N +P+ +NL L + N L P+ + L
Sbjct: 305 RLERLIASFNHLAE-VPE---LPQNLKQLHVEYNPLR-EFPDIPESVEDL 349
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 52.5 bits (124), Expect = 6e-08
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 11/90 (12%)
Query: 122 HNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEM 181
N+ I +L L++S+N L LP L L SFN + ++PE+
Sbjct: 269 LNASSNEIRSLCDLPPSLEELNVSNNKLI-ELPALPPRLE----RLIASFNHLA-EVPEL 322
Query: 182 YGHFPVMVSLDLRNNNLSGEIPQV-GSLLN 210
+ + L + N L E P + S+ +
Sbjct: 323 PQN---LKQLHVEYNPLR-EFPDIPESVED 348
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 39.8 bits (91), Expect = 7e-04
Identities = 13/67 (19%), Positives = 26/67 (38%), Gaps = 8/67 (11%)
Query: 61 HCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDL 120
C+ + L L N L+ +P L L + N+ ++ +P +L L +
Sbjct: 34 DCLDRQAHELELNNLGLSS-LPELPP---HLESLVASCNSLTE-LPELP---QSLKSLLV 85
Query: 121 AHNSFCG 127
+N+
Sbjct: 86 DNNNLKA 92
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 39.0 bits (89), Expect = 0.001
Identities = 14/64 (21%), Positives = 22/64 (34%), Gaps = 9/64 (14%)
Query: 113 TNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFN 172
L+L + +P+ +L L S N L LPE L+ +L + N
Sbjct: 38 RQAHELELNNLGLSS-LPE---LPPHLESLVASCNSLT-ELPELPQSLK----SLLVDNN 88
Query: 173 QFSG 176
Sbjct: 89 NLKA 92
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.9 bits (139), Expect = 1e-09
Identities = 40/205 (19%), Positives = 74/205 (36%), Gaps = 45/205 (21%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRF-KDFESEVEAIARVQHPNI 407
VG G + V GR VA+++L + F K E+ + ++H N+
Sbjct: 25 PVGSGAYGAVCSAVDGRTG-----AKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 79
Query: 408 VRLKAFYYANDEKLLISDF--------------IRNGSL-----------------YAAL 436
+ L + ++ +DF +++ L Y
Sbjct: 80 IGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHA 139
Query: 437 HGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNV--------YLAPEARIYGSKFTQK 488
G L PG V ++ + G A S + Y APE + ++TQ
Sbjct: 140 AGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQT 199
Query: 489 CDVYSFGIVLLEILTGRLPDAGPEN 513
D++S G ++ E++TG+ G ++
Sbjct: 200 VDIWSVGCIMAEMITGKTLFKGSDH 224
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.9 bits (139), Expect = 1e-09
Identities = 39/268 (14%), Positives = 79/268 (29%), Gaps = 60/268 (22%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKD---FESEVEAIARVQH- 404
V+G G ++ V G G + A++ L + + K +E + + ++
Sbjct: 31 VLGTGAYGKVFLVRKISGHDTG--KLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQS 88
Query: 405 PNIVRLKAFYYANDEKLLISDFIRNGSLYAAL---------------------------H 437
P +V L + + LI D+I G L+ L
Sbjct: 89 PFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKL 148
Query: 438 GFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNV-------------YLAPEARIYGSK 484
G + + N +V + G +++ R S
Sbjct: 149 GIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSG 208
Query: 485 FTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEI 544
+ D +S G+++ E+LTG P + + + R+ + P + +
Sbjct: 209 HDKAVDWWSLGVLMYELLTGASPFTV-DGEKNSQAEISRRILKSEPPYPQEMSALAK--- 264
Query: 545 HAKRQVLATFHIALNCTELDPEFRPRMR 572
+ DP+ R
Sbjct: 265 ----------DLIQRLLMKDPKKRLGCG 282
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.1 bits (138), Expect = 1e-09
Identities = 14/92 (15%), Positives = 26/92 (28%), Gaps = 6/92 (6%)
Query: 114 NLVYLDLAHNSFC-GPIPDRIKTLKNLTHLDLSSNLLNG----SLPEFLLDLRALTGTLN 168
++ LD+ + + L+ + L L + L AL LN
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALA-ELN 61
Query: 169 LSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSG 200
L N+ S ++ +L
Sbjct: 62 LRSNELGDVGVHCVLQGLQTPSCKIQKLSLQN 93
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.1 bits (138), Expect = 2e-09
Identities = 20/102 (19%), Positives = 35/102 (34%), Gaps = 14/102 (13%)
Query: 106 PANLFNATNLVYLDLAHNSF----CGPIPDRIKTLKNLTHLDLSSNLLNGS----LPEFL 157
+ L L LA C + + +L LDLS+N L + L E +
Sbjct: 362 QGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESV 421
Query: 158 LDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLS 199
L L L +S ++ + + +L+ +L
Sbjct: 422 RQPGCLLEQLVLYDIYWSEEMEDR------LQALEKDKPSLR 457
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.8 bits (132), Expect = 7e-09
Identities = 17/108 (15%), Positives = 28/108 (25%), Gaps = 9/108 (8%)
Query: 90 SLTRLSLASNNFSKPIPANLFNA-TNLVYLDLAHNSF----CGPIPDRIKTLKNLTHLDL 144
+ L + S A L + L C I ++ L L+L
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 145 SSNLLNG----SLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVM 188
SN L + + L L+L +G +
Sbjct: 63 RSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRT 110
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.0 bits (130), Expect = 1e-08
Identities = 14/72 (19%), Positives = 25/72 (34%), Gaps = 6/72 (8%)
Query: 138 NLTHLDLSSNLLNGS-LPEFLLDLRALTGTLNLSFNQFSGQ----IPEMYGHFPVMVSLD 192
++ LD+ L+ + E L L+ + L + I P + L+
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQ-VVRLDDCGLTEARCKDISSALRVNPALAELN 61
Query: 193 LRNNNLSGEIPQ 204
LR+N L
Sbjct: 62 LRSNELGDVGVH 73
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.0 bits (130), Expect = 1e-08
Identities = 18/117 (15%), Positives = 40/117 (34%), Gaps = 9/117 (7%)
Query: 54 PCHWSGIHCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFS----KPIPANL 109
+ ++++ L + + + L L LA + S + A L
Sbjct: 334 SVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATL 393
Query: 110 FNATNLVYLDLAHNSFCGPIPDRI-KTLKN----LTHLDLSSNLLNGSLPEFLLDLR 161
+L LDL++N ++ ++++ L L L + + + L L
Sbjct: 394 LANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSEEMEDRLQALE 450
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.9 bits (122), Expect = 1e-07
Identities = 20/110 (18%), Positives = 40/110 (36%), Gaps = 10/110 (9%)
Query: 47 WSESDSTPCHWSGIHCIRNRVTSLYLPNRNLTG----YMPSELGLLNSLTRLSLASNNFS 102
E G+ + + L+L + +++ + + L +SL L L++N
Sbjct: 351 RLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLG 410
Query: 103 KPIPANLFNA-----TNLVYLDLAHNSFCGPIPDRIKTL-KNLTHLDLSS 146
L + L L L + + DR++ L K+ L + S
Sbjct: 411 DAGILQLVESVRQPGCLLEQLVLYDIYWSEEMEDRLQALEKDKPSLRVIS 460
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.1 bits (120), Expect = 2e-07
Identities = 17/91 (18%), Positives = 28/91 (30%), Gaps = 10/91 (10%)
Query: 67 VTSLYLPNRNLTGYMPSEL-GLLNSLTRLSLASNNFS----KPIPANLFNATNLVYLDLA 121
+ SL + L+ +EL LL + L + K I + L L L+L
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 63
Query: 122 HNSFCGPIPDRI-----KTLKNLTHLDLSSN 147
N + + L L +
Sbjct: 64 SNELGDVGVHCVLQGLQTPSCKIQKLSLQNC 94
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.6 bits (85), Expect = 0.004
Identities = 9/43 (20%), Positives = 12/43 (27%), Gaps = 4/43 (9%)
Query: 166 TLNLSFNQFSGQ----IPEMYGHFPVMVSLDLRNNNLSGEIPQ 204
L L+ S + + LDL NN L
Sbjct: 373 VLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGIL 415
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 54.0 bits (129), Expect = 1e-09
Identities = 26/122 (21%), Positives = 43/122 (35%), Gaps = 7/122 (5%)
Query: 94 LSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSL 153
L LA + + + +L + +LDL+HN P L L L++ N
Sbjct: 3 LHLAHKDLT--VLCHLEQLLLVTHLDLSHNRLRALPP----ALAALRCLEVLQASDNALE 56
Query: 154 PEFLLDLRALTGTLNLSFNQF-SGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQG 212
+ L L N+ + P +V L+L+ N+L E L
Sbjct: 57 NVDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEML 116
Query: 213 PT 214
P+
Sbjct: 117 PS 118
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 46.6 bits (110), Expect = 6e-07
Identities = 22/117 (18%), Positives = 33/117 (28%), Gaps = 27/117 (23%)
Query: 70 LYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLV------------- 116
L+L +++LT L L +T L L+ N P L L
Sbjct: 3 LHLAHKDLTV--LCHLEQLLLVTHLDLSHNRLRALPP-ALAALRCLEVLQASDNALENVD 59
Query: 117 ---------YLDLAHNSF-CGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRAL 163
L L +N + + L L+L N L L +
Sbjct: 60 GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQ-EEGIQERLAEM 115
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 36.2 bits (83), Expect = 0.002
Identities = 12/55 (21%), Positives = 21/55 (38%), Gaps = 4/55 (7%)
Query: 92 TRLSLASNNFSK-PIPANLFNATNLVYLDLAHNSFCGP---IPDRIKTLKNLTHL 142
L L +N + L + LV L+L NS C + L +++ +
Sbjct: 68 QELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSI 122
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 57.2 bits (137), Expect = 1e-09
Identities = 42/281 (14%), Positives = 86/281 (30%), Gaps = 59/281 (20%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRL-TEGDATWRFKDFESEVEAIARVQHPNI 407
+G+ G++YK G A++++ E + E+ + ++H NI
Sbjct: 9 KIGEGTYGVVYKAQNNYG------ETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 408 VRLKAFYYANDEKLLISDFIRNGSLY----------------------AALHGFGLNRLL 445
V+L + +L+ + + + R+L
Sbjct: 63 VKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVL 122
Query: 446 -----PGTSKVTKNETIVTSGTG-SRISAISN----------VYLAPEARIYGSKFTQKC 489
P + + + + G +R I Y AP+ + K++
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTI 182
Query: 490 DVYSFGIVLLEILTGRLPDAGPENDG------KGLESLVRKAFRERRPLSEVIDPALVKE 543
D++S G + E++ G G + L + K + L + V E
Sbjct: 183 DIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYE 242
Query: 544 IHAKRQVLATF-----HIALNCTELDPEFRPRMRTVSESLD 579
L + +LDP R T ++L+
Sbjct: 243 PLPWESFLKGLDESGIDLLSKMLKLDPNQRI---TAKQALE 280
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.1 bits (137), Expect = 2e-09
Identities = 39/263 (14%), Positives = 78/263 (29%), Gaps = 62/263 (23%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWR--FKDFESEVEAIARVQHPN 406
++GK G + V + +G A++ L + + +E + +HP
Sbjct: 12 LLGKGTFGKVILVR-EKATG----RYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 407 IVRLKAFYYANDEKLLISDFIRNGSLY----------------------AALHGFGLNR- 443
+ LK + +D + ++ G L+ +AL
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV 126
Query: 444 ----LLPGTSKVTKNETIVTSGTGSRISAISN----------VYLAPEARIYGSKFTQKC 489
+ + K+ I + G IS+ + + + +
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAV 186
Query: 490 DVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQ 549
D + G+V+ E++ GRLP + E L E + P K + A
Sbjct: 187 DWWGLGVVMYEMMCGRLP-----FYNQDHERLFELILMEEIRFPRTLSPEA-KSLLAG-- 238
Query: 550 VLATFHIALNCTELDPEFRPRMR 572
+ DP+ R
Sbjct: 239 ----------LLKKDPKQRLGGG 251
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.8 bits (128), Expect = 2e-08
Identities = 42/286 (14%), Positives = 87/286 (30%), Gaps = 67/286 (23%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRF-KDFESEVEAIARVQHPNI 407
+G+ G ++K R + +VA++R+ D E+ + ++H NI
Sbjct: 9 KIGEGTYGTVFKAKN-RETH----EIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 408 VRLKAFYYANDEKLLISDFIRNGSLY-------------------------AALHGFGL- 441
VRL +++ + L+ +F H +
Sbjct: 64 VRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVL 123
Query: 442 -------NRLLP--GTSKVTK---NETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKC 489
N L+ G K+ ++ Y P+ ++
Sbjct: 124 HRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSI 183
Query: 490 DVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQ 549
D++S G + E+ P G ++ +++ FR +E P++ K K
Sbjct: 184 DMWSAGCIFAELANAGR----PLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPY 239
Query: 550 VLATFHIAL----------------NCTELDPEFRPRMRTVSESLD 579
+ +L N + +P R + E+L
Sbjct: 240 PMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRI---SAEEALQ 282
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.1 bits (129), Expect = 2e-08
Identities = 41/301 (13%), Positives = 81/301 (26%), Gaps = 78/301 (25%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRL----TEGDATWRFKDFESEVEAIARVQH 404
+G+ G ++K + G VA++R+ E + + + +H
Sbjct: 14 EIGEGAYGKVFKARDLKNGG----RFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEH 69
Query: 405 PNIVRLKAFYYANDEKLLISDFIRNGSLY------------------------------- 433
PN+VRL + + +
Sbjct: 70 PNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGL 129
Query: 434 AALHGFGL--------NRLL----------PGTSKVTKNETIVTSGTGSRISAISNVYLA 475
LH + N L+ G +++ + +TS + Y A
Sbjct: 130 DFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTL------WYRA 183
Query: 476 PEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEV 535
PE + S + D++S G + E+ + G + + + L
Sbjct: 184 PE-VLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD 242
Query: 536 IDPALVKEIHAKRQVLATF---------HIALNCTELDPEFRPRMRTVSE-----SLDRV 581
+ Q + F + L C +P R + L+R
Sbjct: 243 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERC 302
Query: 582 K 582
K
Sbjct: 303 K 303
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.7 bits (128), Expect = 2e-08
Identities = 39/261 (14%), Positives = 77/261 (29%), Gaps = 53/261 (20%)
Query: 359 YKVV--VGRGSGMGA---------PTVVAVRRLTEGDATWRF-KDFESEVEAIARVQHPN 406
Y+ + VG G G+ VAV++L+ + K E+ + ++H N
Sbjct: 20 YQNLSPVGSG-AYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 407 IVRLKAFYYANDEKLLISDFI--------------RNGSLY---------------AALH 437
++ L + +D + L +H
Sbjct: 79 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 138
Query: 438 GFGL--------NRLL--PGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQ 487
+ N + K+ + + Y APE + + Q
Sbjct: 139 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 198
Query: 488 KCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAK 547
D++S G ++ E+LTGR G + L+ ++R L + I +
Sbjct: 199 TVDIWSVGCIMAELLTGRTLFPG-TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 257
Query: 548 RQVLATFHIALNCTELDPEFR 568
+ + A +P
Sbjct: 258 LTQMPKMNFANVFIGANPLAV 278
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 50.6 bits (120), Expect = 2e-07
Identities = 24/213 (11%), Positives = 63/213 (29%), Gaps = 47/213 (22%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-HPNI 407
+G+ K +++ + + V V+ L K + E++ + ++ PNI
Sbjct: 42 KLGRGKYSEVFEAI-NITNN----EKVVVKILKPVKK----KKIKREIKILENLRGGPNI 92
Query: 408 VRLKAFYYANDEKL--LISDFIRNGSLYAALHGFGLNRLLPGTSKVT------------- 452
+ L + L+ + + N + ++
Sbjct: 93 ITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMH 152
Query: 453 ---KNETIVTSGTGSRISAI-------------------SNVYLAPEARIYGSKFTQKCD 490
K ++ ++ I S + PE + + D
Sbjct: 153 RDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLD 212
Query: 491 VYSFGIVLLEILTGRLPDAGPENDGKGLESLVR 523
++S G +L ++ + P ++ L + +
Sbjct: 213 MWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 245
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.5 bits (117), Expect = 5e-07
Identities = 39/304 (12%), Positives = 77/304 (25%), Gaps = 89/304 (29%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRF-KDFESEVEAIARVQHPNI 407
+G+ G ++K R +G VA++++ + F E++ + ++H N+
Sbjct: 17 KIGQGTFGEVFKARH-RKTG----QKVALKKVLMENEKEGFPITALREIKILQLLKHENV 71
Query: 408 VRLKAFYYANDEK--------LLISDFIRNGSLY----------------------AALH 437
V L L+ DF + L+
Sbjct: 72 VNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLY 131
Query: 438 G----------------------------FGLNRLLPGTSKVTKNETIVTSGTGSRISAI 469
FGL R N T
Sbjct: 132 YIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLW----- 186
Query: 470 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDG-------------- 515
Y PE + + D++ G ++ E+ T G
Sbjct: 187 ---YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITP 243
Query: 516 KGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVS 575
+ ++ E+ L + + + A + + LDP R
Sbjct: 244 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRI---DSD 300
Query: 576 ESLD 579
++L+
Sbjct: 301 DALN 304
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.4 bits (111), Expect = 2e-06
Identities = 11/60 (18%), Positives = 21/60 (35%), Gaps = 3/60 (5%)
Query: 88 LNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSN 147
+ S ++ N + +P +L + L L+ N + LT L+L
Sbjct: 9 VASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRA 65
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.9 bits (102), Expect = 2e-05
Identities = 30/131 (22%), Positives = 43/131 (32%), Gaps = 2/131 (1%)
Query: 44 LDSWSESDSTPCHWSGIHCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSK 103
L + S + + +T L + LT L L L L L N
Sbjct: 79 LGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKT 138
Query: 104 PIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRAL 163
P L L L LA+N+ + L+NL L L N L ++P+ L
Sbjct: 139 LPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLL 197
Query: 164 TGTLNLSFNQF 174
L N +
Sbjct: 198 P-FAFLHGNPW 207
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.4 bits (98), Expect = 7e-05
Identities = 22/83 (26%), Positives = 28/83 (33%), Gaps = 8/83 (9%)
Query: 62 CIRNRVTSL---YLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYL 118
C ++V S RNLT +P +L T L L+ N A L T L L
Sbjct: 4 CEVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQL 60
Query: 119 DLAHNSFCGPIPDRIKTLKNLTH 141
+L TL L
Sbjct: 61 NLDRAELT--KLQVDGTLPVLGT 81
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.6 bits (96), Expect = 1e-04
Identities = 32/183 (17%), Positives = 51/183 (27%), Gaps = 24/183 (13%)
Query: 63 IRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAH 122
+ T L+L L + + L LT+L+L + L LDL+H
Sbjct: 29 LPKDTTILHLSENLLYTFSLATLMPYTRLTQLNL--DRAELTKLQVDGTLPVLGTLDLSH 86
Query: 123 NSFCGPIPDRIKTLKNLTHLDLSSNLLN----------------------GSLPEFLLDL 160
N + L + +LP LL
Sbjct: 87 NQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTP 146
Query: 161 RALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNP 220
L+L+ N + + + +L L+ N+L GNP
Sbjct: 147 TPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNP 206
Query: 221 GLC 223
LC
Sbjct: 207 WLC 209
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.9 bits (89), Expect = 0.001
Identities = 15/72 (20%), Positives = 27/72 (37%), Gaps = 4/72 (5%)
Query: 111 NATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLS 170
+ + ++ + +P + K+ T L LS NLL L+ LT LNL
Sbjct: 8 KVASHLEVNCDKRNLTA-LPPDL--PKDTTILHLSENLLYTFSLATLMPYTRLT-QLNLD 63
Query: 171 FNQFSGQIPEMY 182
+ + +
Sbjct: 64 RAELTKLQVDGT 75
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.5 bits (88), Expect = 0.001
Identities = 12/66 (18%), Positives = 22/66 (33%), Gaps = 4/66 (6%)
Query: 132 RIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSL 191
+ + + ++ L +LP DL T L+LS N + + L
Sbjct: 5 EVSKVASHLEVNCDKRNLT-ALPP---DLPKDTTILHLSENLLYTFSLATLMPYTRLTQL 60
Query: 192 DLRNNN 197
+L
Sbjct: 61 NLDRAE 66
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 47.9 bits (113), Expect = 2e-06
Identities = 42/301 (13%), Positives = 88/301 (29%), Gaps = 65/301 (21%)
Query: 306 GKEEKTNDAVLVTDEEEGQKGKFFIIDEGFSLELEDLLRASAYVVGKSKNGIMYKVVVGR 365
G E+++ L +E+ K L+ D ++ +G G + V +
Sbjct: 9 GSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIK----TLGTGSFGRVMLVK-HK 63
Query: 366 GSGMGAPTVVAVRRLTEGDATW--RFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLI 423
SG A++ L + + + +E + V P +V+L+ + N ++
Sbjct: 64 ESG----NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119
Query: 424 SDFIRNGSLY-------------------------AALHGFGL--------NRLLPGTSK 450
+++ G ++ LH L N L+
Sbjct: 120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 179
Query: 451 VTKNETIVTSGTGSRISAISNV--YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPD 508
+ + R + LAPE I + + D ++ G+++ E+ G P
Sbjct: 180 IQVTDFGFAKRVKGRTWTLCGTPEALAPE-IILSKGYNKAVDWWALGVLIYEMAAGYPP- 237
Query: 509 AGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFR 568
+ K + L + N ++D R
Sbjct: 238 ----FFADQPIQIYEKIVSGKVRFPSHFSSDL-------------KDLLRNLLQVDLTKR 280
Query: 569 P 569
Sbjct: 281 F 281
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 47.6 bits (111), Expect = 2e-06
Identities = 16/110 (14%), Positives = 33/110 (30%), Gaps = 11/110 (10%)
Query: 90 SLTRLSLASNNFS----KPIPANLFNATNLVYLDLAHNSF----CGPIPDRIKTLKNLTH 141
S+ SL + + K + A L ++ + L+ N+ + + I + K+L
Sbjct: 4 SIEGKSLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEI 63
Query: 142 LDLSSN---LLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVM 188
+ S + +PE L L +
Sbjct: 64 AEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPL 113
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 40.2 bits (92), Expect = 4e-04
Identities = 14/96 (14%), Positives = 28/96 (29%), Gaps = 12/96 (12%)
Query: 55 CHWSGIHCIRNRVTSLYLPNRNLTGYMPSELG------LLNSLTRLSLASNNFSKPIPAN 108
+ + L L + L+ + + L L L N
Sbjct: 233 SALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRT 292
Query: 109 LFNA-----TNLVYLDLAHNSFCGPIPDRIKTLKNL 139
L +L++L+L N F D + ++ +
Sbjct: 293 LKTVIDEKMPDLLFLELNGNRF-SEEDDVVDEIREV 327
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 37.2 bits (84), Expect = 0.004
Identities = 10/73 (13%), Positives = 26/73 (35%), Gaps = 4/73 (5%)
Query: 82 PSELGLLNSLTRLSLASNNFS----KPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLK 137
+ L +S+ + L+ N + + N+ + +L + + + + L+
Sbjct: 24 FAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALR 83
Query: 138 NLTHLDLSSNLLN 150
L L L+
Sbjct: 84 LLLQALLKCPKLH 96
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.7 bits (102), Expect = 1e-05
Identities = 21/126 (16%), Positives = 40/126 (31%), Gaps = 6/126 (4%)
Query: 81 MPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLT 140
+ + ++ +L +L V L+ + + + + L
Sbjct: 12 LKLIMSKRYDGSQQALDLKGL--RSDPDLVAQNIDVVLNRRSS-MAATLRIIEENIPELL 68
Query: 141 HLDLSSNLLNG--SLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNL 198
L+LS+N L + + L LNLS N+ + + L L N+L
Sbjct: 69 SLNLSNNRLYRLDDMSSIVQKAPNLK-ILNLSGNELKSERELDKIKGLKLEELWLDGNSL 127
Query: 199 SGEIPQ 204
S
Sbjct: 128 SDTFRD 133
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 156 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.2 bits (100), Expect = 2e-05
Identities = 23/117 (19%), Positives = 37/117 (31%), Gaps = 3/117 (2%)
Query: 113 TNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLL-DLRALTGTLNLSF 171
L + + +NLT L + + L L L L L +
Sbjct: 8 HGSSGLRCTRDGALD-SLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELR-NLTIVK 65
Query: 172 NQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGLCGFPLQ 228
+ P+ + P + L+L N L + L+ SGNP C L+
Sbjct: 66 SGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLSLQELVLSGNPLHCSCALR 122
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 156 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.4 bits (90), Expect = 3e-04
Identities = 17/101 (16%), Positives = 29/101 (28%), Gaps = 3/101 (2%)
Query: 61 HCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLD 119
C + + L L +LT L + + + + L L
Sbjct: 4 ACCPHGSSGLRCTRDGALD-SLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLT 62
Query: 120 LAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDL 160
+ + PD L+ L+LS N SL +
Sbjct: 63 IVKSGLRFVAPDAFHFTPRLSRLNLSFN-ALESLSWKTVQG 102
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.8 bits (97), Expect = 4e-05
Identities = 24/93 (25%), Positives = 34/93 (36%), Gaps = 4/93 (4%)
Query: 107 ANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGT 166
A NA LDL I + TL +D S N + + LR L T
Sbjct: 12 AQYTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRK--LDGFPLLRRLK-T 67
Query: 167 LNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLS 199
L ++ N+ + P + L L NN+L
Sbjct: 68 LLVNNNRICRIGEGLDQALPDLTELILTNNSLV 100
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.0 bits (99), Expect = 5e-05
Identities = 11/75 (14%), Positives = 20/75 (26%), Gaps = 13/75 (17%)
Query: 55 CHWSGIHCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATN 114
C C ++VT + PS L + L +
Sbjct: 8 CSNRVFLCQESKVTEI-----------PS--DLPRNAIELRFVLTKLRVIQKGAFSGFGD 54
Query: 115 LVYLDLAHNSFCGPI 129
L ++++ N I
Sbjct: 55 LEKIEISQNDVLEVI 69
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.2 bits (97), Expect = 9e-05
Identities = 13/108 (12%), Positives = 26/108 (24%), Gaps = 3/108 (2%)
Query: 47 WSESDSTPCHWSGIHCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIP 106
+ + + L+L + +NN +
Sbjct: 135 QDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNLEELPN 194
Query: 107 ANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLP 154
A+ V LD++ ++ LK L + LP
Sbjct: 195 DVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYN---LKKLP 239
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.2 bits (84), Expect = 0.003
Identities = 7/55 (12%), Positives = 17/55 (30%), Gaps = 3/55 (5%)
Query: 90 SLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144
S + ++ IP++L N + L +L +++
Sbjct: 9 SNRVFLCQESKVTE-IPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEI 60
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.0 bits (100), Expect = 6e-05
Identities = 38/283 (13%), Positives = 84/283 (29%), Gaps = 57/283 (20%)
Query: 350 VGKSKNGIM--YKVV--VGRGSGMGA---------PTVVAVRRLTEGDATWRF-KDFESE 395
VG S ++ Y+ + +G G G VA+++L+ K E
Sbjct: 8 VGDSTFTVLKRYQNLKPIGSG-AQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRE 66
Query: 396 VEAIARVQHPNIVRLKAFYYAND------EKLLISDFIRNGSLYAALHGFGLNRLL---- 445
+ + V H NI+ L + + L+ + + R+
Sbjct: 67 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLY 126
Query: 446 --------------------PGTSKVTKNETIVTSGTGSRISAISNVYL----------A 475
P V + T+ G +A ++ + A
Sbjct: 127 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 186
Query: 476 PEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEV 535
PE I G + + D++S G ++ E++ ++ G + ++ + +
Sbjct: 187 PE-VILGMGYKENVDIWSVGCIMGEMVRHKILFPG-RDYIDQWNKVIEQLGTPCPEFMKK 244
Query: 536 IDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 578
+ P + + + + L L P + +
Sbjct: 245 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQA 287
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 41.9 bits (97), Expect = 9e-05
Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 6/66 (9%)
Query: 108 NLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTL 167
L N + L L N P + +L NL + L +N ++ P L + L +
Sbjct: 168 PLANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLF-IV 222
Query: 168 NLSFNQ 173
L+ NQ
Sbjct: 223 TLT-NQ 227
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 40.4 bits (93), Expect = 3e-04
Identities = 17/78 (21%), Positives = 31/78 (39%), Gaps = 6/78 (7%)
Query: 47 WSESDSTPCHWSGIHCIRN--RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKP 104
S + + N ++T+L + ++ S L L +L + L +N S
Sbjct: 153 LQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISD--ISPLASLPNLIEVHLKNNQISDV 210
Query: 105 IPANLFNATNLVYLDLAH 122
P L N +NL + L +
Sbjct: 211 SP--LANTSNLFIVTLTN 226
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 192 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 38.2 bits (87), Expect = 0.001
Identities = 27/161 (16%), Positives = 43/161 (26%), Gaps = 14/161 (8%)
Query: 55 CHWSGIHCIRNRVTS-----------LYLP-NRNLTGYMPSELGLLNSLTRLSLASNNFS 102
C + + C + L L N G L L +L L N +
Sbjct: 8 CEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLT 67
Query: 103 KPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRA 162
P A+++ L L N L L L+L N ++ +P L +
Sbjct: 68 GIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNS 127
Query: 163 LTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIP 203
L T + + + L P
Sbjct: 128 L--TSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAP 166
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 38.5 bits (88), Expect = 0.002
Identities = 10/43 (23%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDG 515
Y +PE + G+ + D++S ++ E++TG E
Sbjct: 195 YRSPE-VLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHS 236
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 37.7 bits (86), Expect = 0.002
Identities = 13/39 (33%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Query: 108 NLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSS 146
L T L L L+ N + LKNL L+L S
Sbjct: 173 PLAGLTKLQNLYLSKNHISDLRA--LAGLKNLDVLELFS 209
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 584 | |||
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 99.98 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 99.98 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 99.97 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 99.97 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 99.97 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 99.97 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 99.97 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 99.97 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 99.97 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 99.97 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 99.97 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 99.97 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 99.96 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 99.93 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.79 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.78 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.76 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 99.7 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.68 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.65 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.61 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.6 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.58 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.58 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.55 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.51 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.51 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.51 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.49 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.49 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.48 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 99.39 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.36 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 99.35 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 99.35 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.34 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 99.32 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.31 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 99.3 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 99.3 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 99.24 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 99.06 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 98.9 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 98.73 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 98.72 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 98.61 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 98.6 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 98.49 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 98.42 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 98.33 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 98.28 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 98.27 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 97.77 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 97.73 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 97.04 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 96.77 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 89.78 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 88.62 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 83.07 |
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.3e-39 Score=311.44 Aligned_cols=211 Identities=21% Similarity=0.316 Sum_probs=164.1
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|++.++ ..||||+++..... .++|.+|++++++++|||||+++|+|.+++..++||||
T Consensus 10 ~~~iG~G~fg~Vy~~~~~~~------~~vAvK~i~~~~~~--~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~ 81 (263)
T d1sm2a_ 10 VQEIGSGQFGLVHLGYWLNK------DKVAIKTIREGAMS--EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF 81 (263)
T ss_dssp EEEEECCSSCCEEEEEETTT------EEEEEEECCSSSSC--HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred EEEEeeCCCeEEEEEEECCC------CEEEEEEECCCcCc--HHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEe
Confidence 46799999999999998776 78999999865333 37899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc------------
Q 007935 427 IRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI------------ 466 (584)
Q Consensus 427 ~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~------------ 466 (584)
|++|+|.++++. . -|+++++.|+.+..+..++..|||.+.
T Consensus 82 ~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~ 161 (263)
T d1sm2a_ 82 MEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 161 (263)
T ss_dssp CTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGGCEEECSCC---------------
T ss_pred cCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeecCCCCeEecccchheeccCCCceeecc
Confidence 999999877653 1 468888999888888888888887432
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC-CCccccChhhhhhhh
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR-PLSEVIDPALVKEIH 545 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~d~~~~~~~~ 545 (584)
..||..|||||++.. ..|+.|+|||||||++|||+|+..|+.. .....++......... ..+...++
T Consensus 162 ~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvil~el~t~~~~~~~----~~~~~~~~~~i~~~~~~~~p~~~~~------- 229 (263)
T d1sm2a_ 162 TKFPVKWASPEVFSF-SRYSSKSDVWSFGVLMWEVFSEGKIPYE----NRSNSEVVEDISTGFRLYKPRLAST------- 229 (263)
T ss_dssp ---CTTSCCHHHHTT-CCCCHHHHHHHHHHHHHHHHTTSCCTTC----SCCHHHHHHHHHHTCCCCCCTTSCH-------
T ss_pred eecCcccCChHHhcC-CCCCchhhhcchHHHHHHHHHCCCCCCC----CCCHHHHHHHHHhcCCCCCccccCH-------
Confidence 357889999999554 6899999999999999999995444432 2223333333333222 12222332
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 546 AKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
++.+++.+||+.||++||||+||++.|++|++
T Consensus 230 ------~l~~li~~cl~~~p~~Rps~~~il~~L~~i~e 261 (263)
T d1sm2a_ 230 ------HVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE 261 (263)
T ss_dssp ------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ------HHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence 34568888999999999999999999999864
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=5.1e-39 Score=316.43 Aligned_cols=215 Identities=25% Similarity=0.378 Sum_probs=165.4
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.++||+|+||+||+|++...+.. ...||||++.........++|.+|+++|++++|||||+++|+|.+++..++||||
T Consensus 31 ~~~lG~G~fg~Vy~~~~~~~~~~--~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv~Ey 108 (299)
T d1jpaa_ 31 EQVIGAGEFGEVCSGHLKLPGKR--EIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEF 108 (299)
T ss_dssp EEEEEECSSSEEEEEEECC---C--CEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eeEEeeCCCeEEEEEEEeCCCCE--EEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEe
Confidence 47899999999999998755321 1579999998765555668899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHh--------------------------cc--cccccCCCCccccccCeEEecCCCccc------------
Q 007935 427 IRNGSLYAALH--------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI------------ 466 (584)
Q Consensus 427 ~~~GsL~~~L~--------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~------------ 466 (584)
|++|+|.++++ +. -|+|+++.|+.+..+..++..|||.+.
T Consensus 109 ~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~ 188 (299)
T d1jpaa_ 109 MENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYT 188 (299)
T ss_dssp CTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC----------------
T ss_pred cCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEECCCCcEEECCcccceEccCCCCcceee
Confidence 99999976654 22 478889999988888888888887432
Q ss_pred ----ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC-CCCccccChhh
Q 007935 467 ----SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER-RPLSEVIDPAL 540 (584)
Q Consensus 467 ----~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~d~~~ 540 (584)
..||+.|||||++.. ..++.++|||||||++|||+| |+.||.+.. ..++........ .+.+..+++
T Consensus 189 ~~~~~~~t~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~-----~~~~~~~i~~~~~~~~~~~~~~-- 260 (299)
T d1jpaa_ 189 SALGGKIPIRWTAPEAIQY-RKFTSASDVWSYGIVMWEVMSYGERPYWDMT-----NQDVINAIEQDYRLPPPMDCPS-- 260 (299)
T ss_dssp -------CGGGSCHHHHHS-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----HHHHHHHHHTTCCCCCCTTCCH--
T ss_pred ecccccCCccccCHHHHhc-CCCCcccccccchHHHHHHHhCCCCCCCCCC-----HHHHHHHHHcCCCCCCCccchH--
Confidence 246888999999554 689999999999999999998 899997532 233333333322 122222222
Q ss_pred hhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 541 VKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 541 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.+.+++.+||+.||++||||.||++.|+++.
T Consensus 261 -----------~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l 291 (299)
T d1jpaa_ 261 -----------ALHQLMLDCWQKDRNHRPKFGQIVNTLDKMI 291 (299)
T ss_dssp -----------HHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred -----------HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 3456888899999999999999999999863
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.7e-39 Score=308.32 Aligned_cols=207 Identities=21% Similarity=0.320 Sum_probs=168.7
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC--CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEe
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG--DATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLI 423 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV 423 (584)
..+.||+|+||+||+|+...++ +.||||++... ......+.+.+|++++++++|||||++++++.+++..++|
T Consensus 10 i~~~iG~G~fg~Vy~~~~~~~~-----~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~iv 84 (263)
T d2j4za1 10 IGRPLGKGKFGNVYLAREKQSK-----FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 84 (263)
T ss_dssp EEEEEEECSSEEEEEEEETTTC-----CEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred EEEEEecCCCcEEEEEEECCCC-----cEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEE
Confidence 3568999999999999998765 89999998754 1223347799999999999999999999999999999999
Q ss_pred eecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCccc---------c
Q 007935 424 SDFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI---------S 467 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~---------~ 467 (584)
||||++|+|.++++ +. -|+|++++|+.+..++.++..|||.+. .
T Consensus 85 mEy~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~ 164 (263)
T d2j4za1 85 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 164 (263)
T ss_dssp EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCCCEET
T ss_pred EeecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecCCCCEeecccceeeecCCCccccc
Confidence 99999999976653 33 478899999988888888888887532 3
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHH
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAK 547 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 547 (584)
.||+.|||||++. +..|+.++|||||||++|||+||+.||.+ ....+...........+++.+++++.
T Consensus 165 ~Gt~~Y~APE~~~-~~~~~~~~DiwSlGvilyell~G~~Pf~~-----~~~~~~~~~i~~~~~~~p~~~s~~~~------ 232 (263)
T d2j4za1 165 CGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEA-----NTYQETYKRISRVEFTFPDFVTEGAR------ 232 (263)
T ss_dssp TEEGGGCCHHHHT-TCCCCTTHHHHHHHHHHHHHHHSSCTTCC-----SSHHHHHHHHHTTCCCCCTTSCHHHH------
T ss_pred CCCCcccCHHHHc-CCCCCchhhhhhHhHHHHHHhcCCCCCCC-----CCHHHHHHHHHcCCCCCCccCCHHHH------
Confidence 6899999999955 47899999999999999999999999974 23445555555555555555555443
Q ss_pred HHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 548 RQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 548 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+++.+||+.||++|||++|+++
T Consensus 233 -------~li~~~L~~dp~~R~t~~eil~ 254 (263)
T d2j4za1 233 -------DLISRLLKHNPSQRPMLREVLE 254 (263)
T ss_dssp -------HHHHHHTCSSGGGSCCHHHHHT
T ss_pred -------HHHHHHccCCHhHCcCHHHHHc
Confidence 4666799999999999999985
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-38 Score=307.93 Aligned_cols=208 Identities=19% Similarity=0.252 Sum_probs=157.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||+||+|+...++ +.||||+++........++|.+|+++|++++|||||++++++.+++..|+||||
T Consensus 10 ~~~lG~G~fg~V~~~~~~~~~-----~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy 84 (271)
T d1nvra_ 10 VQTLGEGAYGEVQLAVNRVTE-----EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 84 (271)
T ss_dssp EEEEEEETTEEEEEEEETTTC-----CEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred EEEEecCcCeEEEEEEECCCC-----CEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEec
Confidence 468999999999999998765 899999998754444457899999999999999999999999999999999999
Q ss_pred ccCCcHHHHH-------------------------hcc--cccccCCCCccccccCeEEecCCCccc-------------
Q 007935 427 IRNGSLYAAL-------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSRI------------- 466 (584)
Q Consensus 427 ~~~GsL~~~L-------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~------------- 466 (584)
|++|+|.++| |+. .|+|++++|+.+..++.++..|||.+.
T Consensus 85 ~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~~~~ 164 (271)
T d1nvra_ 85 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 164 (271)
T ss_dssp CTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECCBCC
T ss_pred cCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECCCCCEEEccchhheeeccCCccccccc
Confidence 9999995444 444 478899999988888888888887432
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC--CCccccChhhhhhh
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR--PLSEVIDPALVKEI 544 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~d~~~~~~~ 544 (584)
.+||+.|||||++.....++.++||||+||++|||+||+.||............ ...... .....+++
T Consensus 165 ~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~----~~~~~~~~~~~~~~s~------ 234 (271)
T d1nvra_ 165 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD----WKEKKTYLNPWKKIDS------ 234 (271)
T ss_dssp CCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHH----HHTTCTTSTTGGGSCH------
T ss_pred eeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHH----HhcCCCCCCccccCCH------
Confidence 369999999999655333467899999999999999999999754332211111 111111 11122233
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
++.+++.+||+.||++|||++|+++
T Consensus 235 -------~~~~li~~~L~~dP~~R~t~~eil~ 259 (271)
T d1nvra_ 235 -------APLALLHKILVENPSARITIPDIKK 259 (271)
T ss_dssp -------HHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -------HHHHHHHHHcCCChhHCcCHHHHhc
Confidence 3345777899999999999999875
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.5e-39 Score=311.28 Aligned_cols=215 Identities=22% Similarity=0.303 Sum_probs=162.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC-CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||+||+|+..+ .||||+++.. ......+.|.+|+++|++++|||||+++|++. .++.++|||
T Consensus 13 ~~~lG~G~fg~Vy~~~~~~--------~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~-~~~~~lv~E 83 (276)
T d1uwha_ 13 GQRIGSGSFGTVYKGKWHG--------DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVTQ 83 (276)
T ss_dssp CSEEEECSSCEEEEEESSS--------EEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred EEEEeeCCCcEEEEEEECC--------EEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEe-ccEEEEEEe
Confidence 4679999999999998642 5999999765 33445688999999999999999999999875 467899999
Q ss_pred cccCCcHHHHHhc----------------------------ccccccCCCCccccccCeEEecCCCcc------------
Q 007935 426 FIRNGSLYAALHG----------------------------FGLNRLLPGTSKVTKNETIVTSGTGSR------------ 465 (584)
Q Consensus 426 y~~~GsL~~~L~~----------------------------~g~~~~~~~~~~i~~~~~~~~~~~~~~------------ 465 (584)
||++|+|.++|+. .-|+|+++.|+.+..+..++..|||.+
T Consensus 84 y~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~~~ 163 (276)
T d1uwha_ 84 WCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 163 (276)
T ss_dssp CCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTSSEEECCCCCSCC----------
T ss_pred cCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCCCCEEEccccceeeccccCCcccc
Confidence 9999999877753 247889999998888888888888743
Q ss_pred -cccCCCcccCccccccC--CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC-CCccccChhhh
Q 007935 466 -ISAISNVYLAPEARIYG--SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR-PLSEVIDPALV 541 (584)
Q Consensus 466 -~~~gt~~y~aPE~~~~~--~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~d~~~~ 541 (584)
...||+.|||||++... ..|+.++|||||||++|||+||+.||.+... ............. +......+.+
T Consensus 164 ~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~----~~~~~~~~~~~~~~p~~~~~~~~~- 238 (276)
T d1uwha_ 164 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN----RDQIIFMVGRGYLSPDLSKVRSNC- 238 (276)
T ss_dssp --CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC----HHHHHHHHHHTSCCCCGGGSCTTC-
T ss_pred cccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCCh----HHHHHHHHhcCCCCCcchhccccc-
Confidence 13689999999986432 3589999999999999999999999975322 1222222222111 1111111111
Q ss_pred hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 542 KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 542 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
...+.+++.+||+.||++||||+||++.|+.++.
T Consensus 239 --------~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~ 272 (276)
T d1uwha_ 239 --------PKAMKRLMAECLKKKRDERPLFPQILASIELLAR 272 (276)
T ss_dssp --------CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --------hHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 1245568888999999999999999999998863
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.1e-38 Score=308.15 Aligned_cols=210 Identities=20% Similarity=0.284 Sum_probs=163.2
Q ss_pred eceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeeccc
Q 007935 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIR 428 (584)
Q Consensus 349 ~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~ 428 (584)
.||+|+||+||+|.+...+. ...||||+++........++|.+|+++|++++|||||+++|+|.+ +..++|||||+
T Consensus 16 ~iG~G~fg~Vy~~~~~~~~~---~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lvmE~~~ 91 (285)
T d1u59a_ 16 ELGCGNFGSVRQGVYRMRKK---QIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAG 91 (285)
T ss_dssp EEECCTTEEEEEEEEC---C---CEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCT
T ss_pred EEecccCeEEEEEEEecCCC---cEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEEEEeCC
Confidence 49999999999998754321 168999999876555556889999999999999999999999864 56899999999
Q ss_pred CCcHHHHHhc----------------------------ccccccCCCCccccccCeEEecCCCccc--------------
Q 007935 429 NGSLYAALHG----------------------------FGLNRLLPGTSKVTKNETIVTSGTGSRI-------------- 466 (584)
Q Consensus 429 ~GsL~~~L~~----------------------------~g~~~~~~~~~~i~~~~~~~~~~~~~~~-------------- 466 (584)
+|+|.++++. .-|+|+++.|+.+..+..++..|||.+.
T Consensus 92 ~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~ 171 (285)
T d1u59a_ 92 GGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSA 171 (285)
T ss_dssp TEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCS
T ss_pred CCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccCCceeeccchhhhcccccccccccccc
Confidence 9999877642 2468899999988888888888887432
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC-CCCccccChhhhhhh
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER-RPLSEVIDPALVKEI 544 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~d~~~~~~~ 544 (584)
..||+.|||||++.. ..++.|+|||||||++|||+| |+.||.+... .+......... .+.++.+++
T Consensus 172 ~~gt~~y~aPE~~~~-~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~-----~~~~~~i~~~~~~~~p~~~~~------ 239 (285)
T d1u59a_ 172 GKWPLKWYAPECINF-RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG-----PEVMAFIEQGKRMECPPECPP------ 239 (285)
T ss_dssp SCCCGGGCCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT-----HHHHHHHHTTCCCCCCTTCCH------
T ss_pred cccCccccChHHHhC-CCCCccchhhcchHHHHHHHhCCCCCCCCCCH-----HHHHHHHHcCCCCCCCCcCCH------
Confidence 257889999999655 589999999999999999998 9999975322 22222222222 222333333
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhh
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 581 (584)
++.+++.+||+.||++||||.+|++.|+.+
T Consensus 240 -------~l~~li~~cl~~~p~~RPs~~~i~~~L~~~ 269 (285)
T d1u59a_ 240 -------ELYALMSDCWIYKWEDRPDFLTVEQRMRAC 269 (285)
T ss_dssp -------HHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred -------HHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 345678889999999999999999999865
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.6e-38 Score=303.27 Aligned_cols=208 Identities=19% Similarity=0.311 Sum_probs=164.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||+||+|+++++ +.||||+++..... .++|.+|++++++++|||||+++|+|.+++..++||||
T Consensus 9 ~~~iG~G~fg~Vy~~~~~~~------~~vAvK~l~~~~~~--~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey 80 (258)
T d1k2pa_ 9 LKELGTGQFGVVKYGKWRGQ------YDVAIKMIKEGSMS--EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY 80 (258)
T ss_dssp CCCCCEETTEEEEEEEETTT------EEEEEEEEESSSSC--HHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEEC
T ss_pred eEEEecCCCeEEEEEEECCC------CEEEEEEECcCcCC--HHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEc
Confidence 45799999999999998755 79999999875433 37899999999999999999999999999999999999
Q ss_pred ccCCcHHHHH--------------------------hccc--ccccCCCCccccccCeEEecCCCccc------------
Q 007935 427 IRNGSLYAAL--------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSRI------------ 466 (584)
Q Consensus 427 ~~~GsL~~~L--------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~------------ 466 (584)
+++|+|.+++ |+.| |+++++.|+.+..+..++..|+|.+.
T Consensus 81 ~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 160 (258)
T d1k2pa_ 81 MANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 160 (258)
T ss_dssp CTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCCC
T ss_pred cCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcCCCcEEECcchhheeccCCCceeecc
Confidence 9999996554 4333 57788888888877888888887432
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC-CCCccccChhhhhhh
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER-RPLSEVIDPALVKEI 544 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~d~~~~~~~ 544 (584)
..||..|||||++.. ..++.|+|||||||++|||+| |+.||.+.. ..++........ .+.+...++
T Consensus 161 ~~~t~~y~aPE~~~~-~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~-----~~~~~~~i~~~~~~~~p~~~~~------ 228 (258)
T d1k2pa_ 161 SKFPVRWSPPEVLMY-SKFSSKSDIWAFGVLMWEIYSLGKMPYERFT-----NSETAEHIAQGLRLYRPHLASE------ 228 (258)
T ss_dssp SCCCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTSC-----HHHHHHHHHTTCCCCCCTTCCH------
T ss_pred cCCCCCcCCcHHhcC-CCCCcceeecccchhhHhHHhcCCCCCCCCC-----HHHHHHHHHhCCCCCCcccccH------
Confidence 357888999999655 689999999999999999998 899997532 233333333322 122233332
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhh
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 581 (584)
++.+++.+||+.||++||||+||++.|.+|
T Consensus 229 -------~l~~li~~cl~~dP~~RPt~~eil~~L~di 258 (258)
T d1k2pa_ 229 -------KVYTIMYSCWHEKADERPTFKILLSNILDV 258 (258)
T ss_dssp -------HHHHHHHHTTCSSGGGSCCHHHHHHHHHCC
T ss_pred -------HHHHHHHHHccCCHhHCcCHHHHHHHhhCC
Confidence 345678889999999999999999998764
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-38 Score=306.86 Aligned_cols=211 Identities=20% Similarity=0.241 Sum_probs=161.4
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCC-CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
+.||+|+||+||+|.+.... ..+.||||+++.. ......++|.+|+++|++++|||||+++|+|.+ +..++||||
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~---~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~ 88 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKK---VVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEM 88 (277)
T ss_dssp EEEEECSSEEEEEEEEECSS---SEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEEC
T ss_pred CCcccCCCeEEEEEEEccCC---cCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEc
Confidence 57999999999999875432 1278999999764 333345789999999999999999999999854 568999999
Q ss_pred ccCCcHHHHHhc-------------------------c--cccccCCCCccccccCeEEecCCCccc-------------
Q 007935 427 IRNGSLYAALHG-------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI------------- 466 (584)
Q Consensus 427 ~~~GsL~~~L~~-------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~------------- 466 (584)
|++|+|.++++. . -|+|+++.|+.+..++..+..|||.+.
T Consensus 89 ~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~ 168 (277)
T d1xbba_ 89 AELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 168 (277)
T ss_dssp CTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC--
T ss_pred CCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcccccCcccccchhhhhhcccccccccccc
Confidence 999999776643 2 478899999988888888888887432
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC-CCCccccChhhhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER-RPLSEVIDPALVKE 543 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~d~~~~~~ 543 (584)
..||+.|||||++.. ..++.++|||||||++|||+| |+.||.+.. ..+......... .+.+..+++
T Consensus 169 ~~~gt~~y~APE~l~~-~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~-----~~~~~~~i~~~~~~~~p~~~~~----- 237 (277)
T d1xbba_ 169 HGKWPVKWYAPECINY-YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK-----GSEVTAMLEKGERMGCPAGCPR----- 237 (277)
T ss_dssp --CCCGGGCCHHHHHH-CEEEHHHHHHHHHHHHHHHHTTTCCSSTTCC-----HHHHHHHHHTTCCCCCCTTCCH-----
T ss_pred ccCCCceecCchhhcC-CCCCchhhhccchhhhhHHhhCCCCCCCCCC-----HHHHHHHHHcCCCCCCCcccCH-----
Confidence 258889999999655 689999999999999999998 899997532 223333332222 222333333
Q ss_pred hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhh
Q 007935 544 IHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581 (584)
Q Consensus 544 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 581 (584)
++.+++.+||+.||++||||+||+++|+..
T Consensus 238 --------~~~~li~~cl~~dp~~RPs~~~i~~~L~~~ 267 (277)
T d1xbba_ 238 --------EMYDLMNLCWTYDVENRPGFAAVELRLRNY 267 (277)
T ss_dssp --------HHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred --------HHHHHHHHHcCCCHhHCcCHHHHHHHhhCH
Confidence 345578889999999999999999988865
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=4.3e-38 Score=307.88 Aligned_cols=213 Identities=23% Similarity=0.347 Sum_probs=168.4
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
..+.||+|+||+||+|++..++ +.||||+++.... ..++|.+|+++|++++|||||+++|+|.+++..++|||
T Consensus 21 ~~~~iG~G~fg~Vy~a~~~~~~-----~~vAvK~i~~~~~--~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E 93 (287)
T d1opja_ 21 MKHKLGGGQYGEVYEGVWKKYS-----LTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 93 (287)
T ss_dssp EEEETTTTTTSSEEEEEEGGGT-----EEEEEEECCTTCS--CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred EeeEEeeCCCeEEEEEEECCCC-----eEEEEEEECCccc--hHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEee
Confidence 3568999999999999998765 8999999976433 34789999999999999999999999999999999999
Q ss_pred cccCCcHHHHHhc---------------------------c--cccccCCCCccccccCeEEecCCCccc----------
Q 007935 426 FIRNGSLYAALHG---------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 426 y~~~GsL~~~L~~---------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
||++|+|.++|+. . -|+|+++.|+.+..+..++..|||.+.
T Consensus 94 ~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~~ 173 (287)
T d1opja_ 94 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 173 (287)
T ss_dssp CCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEEE
T ss_pred cccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECCCCcEEEccccceeecCCCCceee
Confidence 9999999776642 2 478899999998888888998887542
Q ss_pred --ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhc-CCCCccccChhhhhh
Q 007935 467 --SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE-RRPLSEVIDPALVKE 543 (584)
Q Consensus 467 --~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~d~~~~~~ 543 (584)
..||..|||||++.. ..|+.|+|||||||++|||+||..|+.. .............. ..+.++.+++
T Consensus 174 ~~~~g~~~y~aPE~~~~-~~~~~k~DiwS~Gv~l~ell~~~~p~~~----~~~~~~~~~~i~~~~~~~~~~~~~~----- 243 (287)
T d1opja_ 174 AGAKFPIKWTAPESLAY-NKFSIKSDVWAFGVLLWEIATYGMSPYP----GIDLSQVYELLEKDYRMERPEGCPE----- 243 (287)
T ss_dssp TTEEECGGGCCHHHHHH-CCCSHHHHHHHHHHHHHHHHTTSCCSST----TCCHHHHHHHHHTTCCCCCCTTCCH-----
T ss_pred ccccccccccChHHHcC-CCCCchhhhhhHHHHHHHHHhCCCCCCC----cchHHHHHHHHhcCCCCCCCccchH-----
Confidence 246788999999665 6899999999999999999998777643 22233333222222 1222333333
Q ss_pred hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 544 IHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 544 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
++.+++.+||+.||++||||+||++.|+.+..
T Consensus 244 --------~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~~ 275 (287)
T d1opja_ 244 --------KVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 275 (287)
T ss_dssp --------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTS
T ss_pred --------HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 34567888999999999999999999998754
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.3e-38 Score=306.45 Aligned_cols=206 Identities=20% Similarity=0.286 Sum_probs=163.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||+||+|+...++ +.||||+++.. .....+.|.+|+++|++++|||||++++++.+++..++||||
T Consensus 17 ~~~iG~G~fg~Vy~~~~~~~~-----~~vAvK~i~~~-~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy 90 (288)
T d2jfla1 17 IGELGDGAFGKVYKAQNKETS-----VLAAAKVIDTK-SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF 90 (288)
T ss_dssp EEEEEEETTEEEEEEEETTTC-----CEEEEEEEECS-SSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred eEEEeeCCCcEEEEEEECCCC-----eEEEEEEECcC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEec
Confidence 357999999999999988765 89999999764 333458899999999999999999999999999999999999
Q ss_pred ccCCcHHHHH--------------------------hcc--cccccCCCCccccccCeEEecCCCcc-----------cc
Q 007935 427 IRNGSLYAAL--------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSR-----------IS 467 (584)
Q Consensus 427 ~~~GsL~~~L--------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~ 467 (584)
|++|+|.+++ |+. -|+|++++|+.+..++.++..|||.+ ..
T Consensus 91 ~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~~~~~ 170 (288)
T d2jfla1 91 CAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSF 170 (288)
T ss_dssp CTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHHHTCC
T ss_pred CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECCCCCEEEEechhhhccCCCccccccc
Confidence 9999996654 333 37889999999988888899998853 24
Q ss_pred cCCCcccCccccc----cCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC---CccccChhh
Q 007935 468 AISNVYLAPEARI----YGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP---LSEVIDPAL 540 (584)
Q Consensus 468 ~gt~~y~aPE~~~----~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~d~~~ 540 (584)
.||+.|||||++. .+..|+.|+|||||||++|||+||+.||.+... .+.+........+ .+..+++
T Consensus 171 ~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~-----~~~~~~i~~~~~~~~~~~~~~s~-- 243 (288)
T d2jfla1 171 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNP-----MRVLLKIAKSEPPTLAQPSRWSS-- 243 (288)
T ss_dssp CSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCG-----GGHHHHHHHSCCCCCSSGGGSCH--
T ss_pred ccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCH-----HHHHHHHHcCCCCCCCccccCCH--
Confidence 7999999999863 335689999999999999999999999975322 1222233332221 1222333
Q ss_pred hhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 541 VKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 541 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
++.+++.+||+.||++|||+.|+++
T Consensus 244 -----------~~~~li~~~L~~dp~~R~t~~ell~ 268 (288)
T d2jfla1 244 -----------NFKDFLKKCLEKNVDARWTTSQLLQ 268 (288)
T ss_dssp -----------HHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -----------HHHHHHHHHccCChhHCcCHHHHhc
Confidence 3455777899999999999999975
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.9e-38 Score=305.89 Aligned_cols=218 Identities=25% Similarity=0.346 Sum_probs=166.8
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
..++||+|+||.||+|.+..++. .....||||+++........++|.+|++++++++|||||+++|+|.+.+..++|||
T Consensus 11 ~~~~iG~G~fG~Vy~~~~~~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~v~e 89 (283)
T d1mqba_ 11 RQKVIGAGEFGEVYKGMLKTSSG-KKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITE 89 (283)
T ss_dssp EEEEEEECSSSEEEEEEEEC----CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred eeeEEeeCCCeEEEEEEEeCCCC-EEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEEEEE
Confidence 35789999999999999876532 22257999999876555555789999999999999999999999999999999999
Q ss_pred cccCCcHHHH--------------------------Hhcc--cccccCCCCccccccCeEEecCCCccc-----------
Q 007935 426 FIRNGSLYAA--------------------------LHGF--GLNRLLPGTSKVTKNETIVTSGTGSRI----------- 466 (584)
Q Consensus 426 y~~~GsL~~~--------------------------L~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~----------- 466 (584)
||++|++.++ ||+. -|+|+++.|+.+..+..++..|||.+.
T Consensus 90 ~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~ 169 (283)
T d1mqba_ 90 YMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYT 169 (283)
T ss_dssp CCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-------------
T ss_pred ecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccccccccCccccceEEECCCCeEEEcccchhhcccCCCccceE
Confidence 9999998544 4443 478899999998888888888887432
Q ss_pred ---ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC-CCccccChhhhh
Q 007935 467 ---SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR-PLSEVIDPALVK 542 (584)
Q Consensus 467 ---~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~d~~~~~ 542 (584)
..||..|||||++.. ..++.|+|||||||++|||+||..|+... ....+.........+ +.+..++
T Consensus 170 ~~~~~gt~~Y~APE~l~~-~~~~~~sDI~S~Gvil~el~t~~~~~~~~----~~~~~~~~~i~~~~~~~~~~~~~----- 239 (283)
T d1mqba_ 170 TSGGKIPIRWTAPEAISY-RKFTSASDVWSFGIVMWEVMTYGERPYWE----LSNHEVMKAINDGFRLPTPMDCP----- 239 (283)
T ss_dssp ----CCCGGGSCHHHHHS-CCCCHHHHHHHHHHHHHHHHTTSCCTTTT----CCHHHHHHHHHTTCCCCCCTTCB-----
T ss_pred eccCCCCccccCHHHHcc-CCCCCcccccccHHHHHHHHhCCCCcccc----CCHHHHHHHHhccCCCCCchhhH-----
Confidence 247889999998554 68999999999999999999976665432 222333333332221 1122122
Q ss_pred hhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 543 EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 543 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.++.+++.+||+.||++||||.||++.|+++.
T Consensus 240 --------~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~ 271 (283)
T d1mqba_ 240 --------SAIYQLMMQCWQQERARRPKFADIVSILDKLI 271 (283)
T ss_dssp --------HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred --------HHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHh
Confidence 24566888899999999999999999998864
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.6e-38 Score=306.60 Aligned_cols=204 Identities=17% Similarity=0.257 Sum_probs=161.3
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeecc
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 427 (584)
+.||+|+||+||+|+...++ +.||||+++..... ..+.+.+|+++|++++|||||++++++.+++..|+|||||
T Consensus 26 ~~iG~G~fg~Vy~a~~~~~~-----~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~ 99 (293)
T d1yhwa1 26 EKIGQGASGTVYTAMDVATG-----QEVAIRQMNLQQQP-KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (293)
T ss_dssp EECCCSSSCEEEEEEBTTTC-----CEEEEEEEEGGGCS-CHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EEEecCcCcEEEEEEECCCC-----CEEEEEEEecccCh-HHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEec
Confidence 56999999999999987765 89999999764322 3478999999999999999999999999999999999999
Q ss_pred cCCcHHHHH------------------------hcc--cccccCCCCccccccCeEEecCCCccc-----------ccCC
Q 007935 428 RNGSLYAAL------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSRI-----------SAIS 470 (584)
Q Consensus 428 ~~GsL~~~L------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~-----------~~gt 470 (584)
++|+|.+++ |+. -|+|++++|+.+..++.++..|||.+. ..||
T Consensus 100 ~gg~L~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~gt 179 (293)
T d1yhwa1 100 AGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGT 179 (293)
T ss_dssp TTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSC
T ss_pred CCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCCCcEeeccchhheeeccccccccccccC
Confidence 999996544 444 478899999998888888888887432 3699
Q ss_pred CcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC---CCccccChhhhhhhhHH
Q 007935 471 NVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR---PLSEVIDPALVKEIHAK 547 (584)
Q Consensus 471 ~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~ 547 (584)
+.|||||++.. ..|+.++||||+||++|||+||+.||.+.. ............. ..+..+++.
T Consensus 180 ~~Y~aPE~~~~-~~~~~~~DiwSlGvilyemltG~~Pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~s~~-------- 245 (293)
T d1yhwa1 180 PYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMIEGEPPYLNEN-----PLRALYLIATNGTPELQNPEKLSAI-------- 245 (293)
T ss_dssp GGGCCHHHHSS-SCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-----HHHHHHHHHHHCSCCCSSGGGSCHH--------
T ss_pred CCccChhhhcC-CCCCchhceehHhHHHHHHhhCCCCCCCCC-----HHHHHHHHHhCCCCCCCCcccCCHH--------
Confidence 99999999554 689999999999999999999999997422 2222222222211 122333333
Q ss_pred HHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 548 RQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 548 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+.+++.+||+.||++|||+.|+++
T Consensus 246 -----~~~li~~~L~~dP~~R~s~~eil~ 269 (293)
T d1yhwa1 246 -----FRDFLNRCLDMDVEKRGSAKELLQ 269 (293)
T ss_dssp -----HHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred -----HHHHHHHHccCChhHCcCHHHHhc
Confidence 345777799999999999999974
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.4e-38 Score=305.41 Aligned_cols=206 Identities=19% Similarity=0.251 Sum_probs=156.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEe--CCceeEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYA--NDEKLLI 423 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~--~~~~~lV 423 (584)
.+.||+|+||+||+|+...++ +.||||.++... .....+.|.+|+++|++++|||||++++++.+ ++..|+|
T Consensus 9 ~~~iG~G~fg~Vy~~~~~~~~-----~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv 83 (269)
T d2java1 9 LYTIGTGSYGRCQKIRRKSDG-----KILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV 83 (269)
T ss_dssp EEEEEECSSEEEEEEEETTTC-----CEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred eEEEecCCCeEEEEEEECCCC-----CEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence 367999999999999988765 899999997653 33445779999999999999999999999975 4568999
Q ss_pred eecccCCcHHHHH-----------------------------hcc-------cccccCCCCccccccCeEEecCCCcc--
Q 007935 424 SDFIRNGSLYAAL-----------------------------HGF-------GLNRLLPGTSKVTKNETIVTSGTGSR-- 465 (584)
Q Consensus 424 ~Ey~~~GsL~~~L-----------------------------~~~-------g~~~~~~~~~~i~~~~~~~~~~~~~~-- 465 (584)
||||++|+|.+++ |.. -|+|++++|+.+..++.++..|||.+
T Consensus 84 mEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~ 163 (269)
T d2java1 84 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 163 (269)
T ss_dssp EECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHH
T ss_pred EecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceee
Confidence 9999999996554 432 37889999999888888888887632
Q ss_pred ---------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC-CCccc
Q 007935 466 ---------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR-PLSEV 535 (584)
Q Consensus 466 ---------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~~~ 535 (584)
...||+.|||||++. +..|+.++|||||||++|||+||+.||.+. ...++......... .++..
T Consensus 164 ~~~~~~~~~~~~gt~~Y~APE~l~-~~~~~~~~DIwSlGvilyel~tg~~Pf~~~-----~~~~~~~~i~~~~~~~~~~~ 237 (269)
T d2java1 164 LNHDTSFAKAFVGTPYYMSPEQMN-RMSYNEKSDIWSLGCLLYELCALMPPFTAF-----SQKELAGKIREGKFRRIPYR 237 (269)
T ss_dssp C-----------CCCSCCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSSCSCCCS-----SHHHHHHHHHHTCCCCCCTT
T ss_pred cccCCCccccCCCCcccCCHHHHc-CCCCChHHHHHhhCHHHHHHhhCCCCCCCC-----CHHHHHHHHHcCCCCCCCcc
Confidence 247899999999954 468999999999999999999999999742 23334333333322 23333
Q ss_pred cChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 536 IDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 536 ~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
++++ +.+++.+||+.||++|||+.|+++
T Consensus 238 ~s~~-------------l~~li~~~L~~dp~~Rps~~ell~ 265 (269)
T d2java1 238 YSDE-------------LNEIITRMLNLKDYHRPSVEEILE 265 (269)
T ss_dssp SCHH-------------HHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred cCHH-------------HHHHHHHHcCCChhHCcCHHHHHh
Confidence 4433 345777799999999999999974
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.5e-38 Score=303.34 Aligned_cols=209 Identities=24% Similarity=0.294 Sum_probs=162.3
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
..+.||+|+||.||+|++.++ +.||||+++..... .++|.+|++++++++|||||+++|++. ++..++|||
T Consensus 17 ~~~~iG~G~fg~Vy~~~~~~~------~~vAvK~~~~~~~~--~~~~~~E~~~l~~l~HpnIv~~~g~~~-~~~~~iv~E 87 (272)
T d1qpca_ 17 LVERLGAGQFGEVWMGYYNGH------TKVAVKSLKQGSMS--PDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITE 87 (272)
T ss_dssp EEEEEEEETTEEEEEEEETTT------EEEEEEEECTTSSC--HHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred EeEEEecCCCcEEEEEEECCC------CEEEEEEEccCcCC--HHHHHHHHHHHHhCCCCCEeEEEeeec-cCCeEEEEE
Confidence 346799999999999998765 78999999864333 378999999999999999999999875 567899999
Q ss_pred cccCCcHHHHHh---------------------------cc--cccccCCCCccccccCeEEecCCCccc----------
Q 007935 426 FIRNGSLYAALH---------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 426 y~~~GsL~~~L~---------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
|+++|+|.++++ .. -|+|+++.|+.+..+..++..|||.+.
T Consensus 88 y~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~ 167 (272)
T d1qpca_ 88 YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAR 167 (272)
T ss_dssp CCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECC
T ss_pred eCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeeecccceeeccccceEEccCCccccc
Confidence 999999966553 33 378899999988888888888887432
Q ss_pred --ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC-CCccccChhhhhh
Q 007935 467 --SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR-PLSEVIDPALVKE 543 (584)
Q Consensus 467 --~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~d~~~~~~ 543 (584)
..||+.|||||++.. ..++.|+|||||||++|||+||..|+... ....+.......... ..++.+++
T Consensus 168 ~~~~gt~~y~APE~~~~-~~~~~~sDvwS~Gvvl~ellt~~~~~~~~----~~~~~~~~~i~~~~~~~~p~~~~~----- 237 (272)
T d1qpca_ 168 EGAKFPIKWTAPEAINY-GTFTIKSDVWSFGILLTEIVTHGRIPYPG----MTNPEVIQNLERGYRMVRPDNCPE----- 237 (272)
T ss_dssp TTCCCCTTTSCHHHHHH-CEECHHHHHHHHHHHHHHHHTTTCCSSTT----CCHHHHHHHHHTTCCCCCCTTCCH-----
T ss_pred cccCCcccccChHHHhC-CCCCchhhhhhhHHHHHHHHhCCCCCCCC----CCHHHHHHHHHhcCCCCCcccChH-----
Confidence 357889999999655 58999999999999999999976665431 223333333333222 12222332
Q ss_pred hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhh
Q 007935 544 IHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581 (584)
Q Consensus 544 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 581 (584)
++.+++.+||+.||++||||+||+++|+.+
T Consensus 238 --------~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~ 267 (272)
T d1qpca_ 238 --------ELYQLMRLCWKERPEDRPTFDYLRSVLEDF 267 (272)
T ss_dssp --------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --------HHHHHHHHHcCCCHhHCcCHHHHHHHhhhh
Confidence 345688889999999999999999999876
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-37 Score=299.78 Aligned_cols=205 Identities=21% Similarity=0.326 Sum_probs=158.2
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEe----CCceeE
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYA----NDEKLL 422 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~----~~~~~l 422 (584)
+.||+|+||+||+|+...++ +.||+|++.... .....+.|.+|+++|++++|||||++++++.+ ++..++
T Consensus 15 ~~iG~G~fg~Vy~~~~~~~~-----~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~i 89 (270)
T d1t4ha_ 15 IEIGRGSFKTVYKGLDTETT-----VEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 89 (270)
T ss_dssp EEEEECSSEEEEEEEETTTC-----CEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEecCcCcEEEEEEECCCC-----eEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEE
Confidence 46999999999999988765 799999997652 33345789999999999999999999999976 345799
Q ss_pred eeecccCCcHHHHH-------------------------hcc----cccccCCCCccccc-cCeEEecCCCccc------
Q 007935 423 ISDFIRNGSLYAAL-------------------------HGF----GLNRLLPGTSKVTK-NETIVTSGTGSRI------ 466 (584)
Q Consensus 423 V~Ey~~~GsL~~~L-------------------------~~~----g~~~~~~~~~~i~~-~~~~~~~~~~~~~------ 466 (584)
|||||++|+|.+++ |+. -|+|++++|+.+.. +..++..|||.+.
T Consensus 90 vmE~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~~ 169 (270)
T d1t4ha_ 90 VTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF 169 (270)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTS
T ss_pred EEeCCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccCCc
Confidence 99999999996554 443 46888999988854 5678888887432
Q ss_pred ---ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC--CccccChhhh
Q 007935 467 ---SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP--LSEVIDPALV 541 (584)
Q Consensus 467 ---~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~d~~~~ 541 (584)
..||+.|||||++ . ..|+.++|||||||++|||+||+.||.+. .......+.......+ +....++
T Consensus 170 ~~~~~GT~~Y~aPE~~-~-~~~~~~~DIwSlGvilyel~~g~~Pf~~~----~~~~~~~~~i~~~~~~~~~~~~~~~--- 240 (270)
T d1t4ha_ 170 AKAVIGTPEFMAPEMY-E-EKYDESVDVYAFGMCMLEMATSEYPYSEC----QNAAQIYRRVTSGVKPASFDKVAIP--- 240 (270)
T ss_dssp BEESCSSCCCCCGGGG-G-TCCCTHHHHHHHHHHHHHHHHSSCTTTTC----SSHHHHHHHHTTTCCCGGGGGCCCH---
T ss_pred cCCcccCccccCHHHh-C-CCCCCcCchhhHHHHHHHHHHCCCCCCCc----ccHHHHHHHHHcCCCCcccCccCCH---
Confidence 4799999999985 4 36999999999999999999999999742 2233333433332221 1122222
Q ss_pred hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 542 KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 542 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
++.+++.+||++||++|||+.|+++
T Consensus 241 ----------~~~~li~~~l~~dp~~R~s~~ell~ 265 (270)
T d1t4ha_ 241 ----------EVKEIIEGCIRQNKDERYSIKDLLN 265 (270)
T ss_dssp ----------HHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ----------HHHHHHHHHccCCHhHCcCHHHHhC
Confidence 3456788899999999999999975
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.7e-37 Score=306.21 Aligned_cols=207 Identities=20% Similarity=0.293 Sum_probs=163.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
-+.||+|+||+||+|+...++ +.||||+++... .....+.|.+|+++|++++|||||++++++.+++..|+||
T Consensus 20 l~~lG~G~fg~Vy~a~~~~~~-----~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~ 94 (309)
T d1u5ra_ 20 LREIGHGSFGAVYFARDVRNS-----EVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (309)
T ss_dssp EEEEEECSSSEEEEEEETTTT-----EEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred eEEEecCCCeEEEEEEECCCC-----cEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEE
Confidence 357999999999999987765 899999997653 2334567999999999999999999999999999999999
Q ss_pred ecccCCcHH-------------------------HHHhcc--cccccCCCCccccccCeEEecCCCccc-------ccCC
Q 007935 425 DFIRNGSLY-------------------------AALHGF--GLNRLLPGTSKVTKNETIVTSGTGSRI-------SAIS 470 (584)
Q Consensus 425 Ey~~~GsL~-------------------------~~L~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~-------~~gt 470 (584)
|||++|+|. .|||+. -|+|++++|+.+..++.++..|||.+. ..||
T Consensus 95 E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~GT 174 (309)
T d1u5ra_ 95 EYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGT 174 (309)
T ss_dssp ECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCSC
T ss_pred EecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCCCCEEEeecccccccCCCCccccC
Confidence 999999984 444544 478899999999888889999988543 4799
Q ss_pred CcccCcccccc--CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC-C-ccccChhhhhhhhH
Q 007935 471 NVYLAPEARIY--GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP-L-SEVIDPALVKEIHA 546 (584)
Q Consensus 471 ~~y~aPE~~~~--~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~-~-~~~~d~~~~~~~~~ 546 (584)
+.|||||++.. ...|+.++|||||||++|||++|+.||.+. ...+..........+ + ...+++
T Consensus 175 ~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~-----~~~~~~~~i~~~~~~~~~~~~~s~-------- 241 (309)
T d1u5ra_ 175 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM-----NAMSALYHIAQNESPALQSGHWSE-------- 241 (309)
T ss_dssp GGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTS-----CHHHHHHHHHHSCCCCCSCTTSCH--------
T ss_pred ccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCC-----CHHHHHHHHHhCCCCCCCCCCCCH--------
Confidence 99999998642 246899999999999999999999999742 222333333333221 1 112233
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 547 KRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 547 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||+.||++|||++|+++
T Consensus 242 -----~~~~li~~~L~~dP~~Rpt~~ell~ 266 (309)
T d1u5ra_ 242 -----YFRNFVDSCLQKIPQDRPTSEVLLK 266 (309)
T ss_dssp -----HHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -----HHHHHHHHHCcCChhHCcCHHHHHh
Confidence 3445777899999999999999975
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.9e-38 Score=301.04 Aligned_cols=210 Identities=26% Similarity=0.383 Sum_probs=159.6
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEe-CCceeEee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYA-NDEKLLIS 424 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~-~~~~~lV~ 424 (584)
..+.||+|+||.||+|++.+ ..||||+++... ..++|.+|++++++++|||||+++|+|.+ ++..++||
T Consensus 11 ~~~~lG~G~fg~Vy~~~~~~-------~~vAvK~i~~~~---~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ 80 (262)
T d1byga_ 11 LLQTIGKGEFGDVMLGDYRG-------NKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 80 (262)
T ss_dssp EEEEEEECSSCEEEEEEETT-------EEEEEEECCCCC-----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred EeEEEecCCCeEEEEEEECC-------eEEEEEEECcHH---HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEE
Confidence 45779999999999999853 689999997643 23789999999999999999999999965 45689999
Q ss_pred ecccCCcHHHHHhc-----------------------------ccccccCCCCccccccCeEEecCCCccc--------c
Q 007935 425 DFIRNGSLYAALHG-----------------------------FGLNRLLPGTSKVTKNETIVTSGTGSRI--------S 467 (584)
Q Consensus 425 Ey~~~GsL~~~L~~-----------------------------~g~~~~~~~~~~i~~~~~~~~~~~~~~~--------~ 467 (584)
||+++|+|.++|+. ..|+++.+.|+.+..+...+..++|... .
T Consensus 81 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~~~ 160 (262)
T d1byga_ 81 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 160 (262)
T ss_dssp CCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC-----------
T ss_pred eccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhheecCCCCEeecccccceecCCCCccc
Confidence 99999999888753 2467888888888877777777776432 3
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhH
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 546 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 546 (584)
.+|..|||||++.. ..++.++|||||||++|||+| |+.||..... ..+...+... .+.+++..++++
T Consensus 161 ~~~~~y~aPE~l~~-~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~--~~~~~~i~~~--~~~~~~~~~~~~------- 228 (262)
T d1byga_ 161 KLPVKWTAPEALRE-KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--KDVVPRVEKG--YKMDAPDGCPPA------- 228 (262)
T ss_dssp -CCTTTSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG--GGHHHHHTTT--CCCCCCTTCCHH-------
T ss_pred cccccCCChHHHhC-CCCChHHHHHhHHHHHHHHHHCCCCCCCCCCH--HHHHHHHHcC--CCCCCCccCCHH-------
Confidence 67889999999665 689999999999999999999 6777764322 2222222211 122233333333
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 547 KRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 547 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
+.+++.+||+.||++||||.|++++|++|+.
T Consensus 229 ------~~~li~~cl~~dP~~Rps~~~l~~~L~~i~~ 259 (262)
T d1byga_ 229 ------VYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 259 (262)
T ss_dssp ------HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ------HHHHHHHHcccCHhHCcCHHHHHHHHHHHHh
Confidence 3457778999999999999999999999975
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.7e-37 Score=306.21 Aligned_cols=211 Identities=18% Similarity=0.249 Sum_probs=153.1
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
..+.||+|+||+||+|+...++ +.||||++.........+.|.+|+++|++++|||||++++++.+++..|+|||
T Consensus 13 ~~~~lG~G~fg~Vy~~~~~~~~-----~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE 87 (307)
T d1a06a_ 13 FRDVLGTGAFSEVILAEDKRTQ-----KLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQ 87 (307)
T ss_dssp EEEESBSGGGGGEEEEEETTTC-----CEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred EEEEEeeccCeEEEEEEECCCC-----CEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 3568999999999999988765 89999999865433344678999999999999999999999999999999999
Q ss_pred cccCCcHHHHHhc-------------------------c--cccccCCCCccccc---cCeEEecCCCcc----------
Q 007935 426 FIRNGSLYAALHG-------------------------F--GLNRLLPGTSKVTK---NETIVTSGTGSR---------- 465 (584)
Q Consensus 426 y~~~GsL~~~L~~-------------------------~--g~~~~~~~~~~i~~---~~~~~~~~~~~~---------- 465 (584)
||++|+|.++|.. . .|+|++++|+.+.. ++.++..|||.+
T Consensus 88 ~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~~~ 167 (307)
T d1a06a_ 88 LVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS 167 (307)
T ss_dssp CCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC-------------
T ss_pred ccCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeEEccCCCeee
Confidence 9999999777643 2 46888888887643 466777888743
Q ss_pred cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhh
Q 007935 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIH 545 (584)
Q Consensus 466 ~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~ 545 (584)
..+||+.|||||++. +..|+.++|||||||++|||+||+.||.+. .....................+.+.
T Consensus 168 ~~~GT~~y~APE~~~-~~~~~~~~DiwSlGvilyell~g~~Pf~~~-----~~~~~~~~i~~~~~~~~~~~~~~~s---- 237 (307)
T d1a06a_ 168 TACGTPGYVAPEVLA-QKPYSKAVDCWSIGVIAYILLCGYPPFYDE-----NDAKLFEQILKAEYEFDSPYWDDIS---- 237 (307)
T ss_dssp -----CTTSCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSSCSCCCS-----SHHHHHHHHHTTCCCCCTTTTTTSC----
T ss_pred eeeeCccccCcHHHc-CCCCCcHHHhhhhhHHHHHHHhCCCCCCCC-----CHHHHHHHHhccCCCCCCccccCCC----
Confidence 236999999999955 468999999999999999999999999742 2333444444433322211111111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 546 AKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.++.+++.+||+.||++|||+.|+++
T Consensus 238 -----~~~~~li~~~L~~dP~~R~s~~eil~ 263 (307)
T d1a06a_ 238 -----DSAKDFIRHLMEKDPEKRFTCEQALQ 263 (307)
T ss_dssp -----HHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred -----HHHHHHHHHHccCCHhHCcCHHHHhc
Confidence 13455777899999999999999986
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-37 Score=304.69 Aligned_cols=207 Identities=15% Similarity=0.190 Sum_probs=167.2
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEe
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLI 423 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV 423 (584)
..+.||+|+||+||+|+...++ +.||||+++... .....+.+.+|+++|++++|||||++++++.+++..|+|
T Consensus 12 i~~~lG~G~fg~Vy~a~~~~~~-----~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~iv 86 (288)
T d1uu3a_ 12 FGKILGEGSFSTVVLARELATS-----REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG 86 (288)
T ss_dssp EEEEEEECSSCEEEEEEETTTC-----CEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEE
T ss_pred EEEEEeeCCCeEEEEEEECCCC-----CEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEE
Confidence 3468999999999999987765 899999997541 223347799999999999999999999999999999999
Q ss_pred eecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCccc----------
Q 007935 424 SDFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
||||++|+|.++++ +. -|+|++++|+.+..++.++..|||.+.
T Consensus 87 mEy~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~~ 166 (288)
T d1uu3a_ 87 LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 166 (288)
T ss_dssp ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECC-------
T ss_pred EEccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCCCceEEecccccceecccCCcccc
Confidence 99999999976654 32 478899999988888888888887432
Q ss_pred ---ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhh
Q 007935 467 ---SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKE 543 (584)
Q Consensus 467 ---~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~ 543 (584)
..||+.|||||++. +..|+.++||||+||++|||+||+.||.+. +..............+++.+++++
T Consensus 167 ~~~~~GT~~Y~APE~~~-~~~~~~~~DiwSlGvilyell~g~~Pf~~~-----~~~~~~~~i~~~~~~~p~~~s~~~--- 237 (288)
T d1uu3a_ 167 ANSFVGTAQYVSPELLT-EKSACKSSDLWALGCIIYQLVAGLPPFRAG-----NEYLIFQKIIKLEYDFPEKFFPKA--- 237 (288)
T ss_dssp ---CCCCGGGCCHHHHH-TCCCCHHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHTTCCCCCTTCCHHH---
T ss_pred cccccCCccccCceeec-cCCCCcccceehhhHHHHHHhhCCCCCCCc-----CHHHHHHHHHcCCCCCCccCCHHH---
Confidence 36999999999954 478999999999999999999999999742 334445555555544555555544
Q ss_pred hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 544 IHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 544 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+++.+||+.||++|||++|+.+
T Consensus 238 ----------~~li~~~L~~dP~~R~t~~e~~~ 260 (288)
T d1uu3a_ 238 ----------RDLVEKLLVLDATKRLGCEEMEG 260 (288)
T ss_dssp ----------HHHHHTTSCSSGGGSTTSGGGTC
T ss_pred ----------HHHHHHHccCCHhHCcCHHHHcC
Confidence 44677799999999999999743
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.3e-37 Score=304.99 Aligned_cols=218 Identities=21% Similarity=0.311 Sum_probs=165.9
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC-CceeEee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN-DEKLLIS 424 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~-~~~~lV~ 424 (584)
++++||+|+||+||+|++..+++. ...||||+++........++|.+|+++|++++|||||+++|+|.+. +..++||
T Consensus 31 ~~~~iG~G~fg~Vyk~~~~~~~~~--~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ 108 (311)
T d1r0pa_ 31 FNEVIGRGHFGCVYHGTLLDNDGK--KIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 108 (311)
T ss_dssp EEEEEEEETTEEEEEEEECC------CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEE
T ss_pred cceEEeecCCeEEEEEEEECCCCE--EEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEE
Confidence 467899999999999998765321 2579999998655555568899999999999999999999998764 5789999
Q ss_pred ecccCCcHHHHHhc----------------------------ccccccCCCCccccccCeEEecCCCccc----------
Q 007935 425 DFIRNGSLYAALHG----------------------------FGLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 425 Ey~~~GsL~~~L~~----------------------------~g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
|||++|+|.++++. .-|+++++.|+.+..+..++..|||...
T Consensus 109 E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~ 188 (311)
T d1r0pa_ 109 PYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV 188 (311)
T ss_dssp ECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCT
T ss_pred EEeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeECCCCCEEEecccchhhccccccccc
Confidence 99999999877653 1468888888888888888888887432
Q ss_pred -----ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC-CccccChhh
Q 007935 467 -----SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP-LSEVIDPAL 540 (584)
Q Consensus 467 -----~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~d~~~ 540 (584)
..||..|+|||++.. ..++.|+||||||+++|||+||+.||...... .++........++ .++.+++
T Consensus 189 ~~~~~~~gt~~y~aPE~~~~-~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~----~~~~~~i~~g~~~~~p~~~~~-- 261 (311)
T d1r0pa_ 189 HNKTGAKLPVKWMALESLQT-QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT----FDITVYLLQGRRLLQPEYCPD-- 261 (311)
T ss_dssp TCTTCSSCCGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSCC----------CHHHHHTTCCCCCCTTCCH--
T ss_pred eecccccccccccChHHHhc-CCCCChhHhhhhHHHHHHHHHCCCCCCCCCCH----HHHHHHHHcCCCCCCcccCcH--
Confidence 257889999999665 68999999999999999999988887642221 2222222222222 1222222
Q ss_pred hhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 541 VKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 541 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
++.+++.+||+.||++||||.||++.|+++..
T Consensus 262 -----------~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~ 293 (311)
T d1r0pa_ 262 -----------PLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 293 (311)
T ss_dssp -----------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -----------HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 45568888999999999999999999999864
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.9e-37 Score=307.90 Aligned_cols=217 Identities=24% Similarity=0.306 Sum_probs=168.8
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
..+.||+|+||+||+|+....+.......||||++.........+.|.+|+.+|.++ +|||||+++|+|.+.+..++||
T Consensus 41 l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~ 120 (325)
T d1rjba_ 41 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIF 120 (325)
T ss_dssp EEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred EeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeEEEEE
Confidence 467899999999999998876655556789999997764555557899999999998 8999999999999999999999
Q ss_pred ecccCCcHHHHHhc--------------------------------------------------ccccccCCCCcccccc
Q 007935 425 DFIRNGSLYAALHG--------------------------------------------------FGLNRLLPGTSKVTKN 454 (584)
Q Consensus 425 Ey~~~GsL~~~L~~--------------------------------------------------~g~~~~~~~~~~i~~~ 454 (584)
|||++|+|.++|+. .-|+|++++|+.+..+
T Consensus 121 Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~Nill~~~ 200 (325)
T d1rjba_ 121 EYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHG 200 (325)
T ss_dssp ECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETT
T ss_pred EcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCchhccccccC
Confidence 99999999888742 1378999999988888
Q ss_pred CeEEecCCCccc-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHH
Q 007935 455 ETIVTSGTGSRI-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLES 520 (584)
Q Consensus 455 ~~~~~~~~~~~~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~ 520 (584)
..++..|||.+. ..||+.|||||++.. ..|+.++|||||||++|||+| |+.||.+.... ..+..
T Consensus 201 ~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~-~~~~~ 278 (325)
T d1rjba_ 201 KVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFE-GIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD-ANFYK 278 (325)
T ss_dssp TEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS-HHHHH
T ss_pred CeEEEeeccccccccCCCceeeeccccCCCccCChHHHcC-CCCCcceeccchhHHHHHHHhCCCCCCCCCCHH-HHHHH
Confidence 889999987532 246889999998655 689999999999999999998 89999754332 12222
Q ss_pred HHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHH
Q 007935 521 LVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579 (584)
Q Consensus 521 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~ 579 (584)
.+.... +.+.+..+++ ++.+|+.+||+.||++||||+||++.|.
T Consensus 279 ~~~~~~--~~~~p~~~~~-------------~l~~li~~cl~~dP~~RPt~~ei~~~L~ 322 (325)
T d1rjba_ 279 LIQNGF--KMDQPFYATE-------------EIYIIMQSCWAFDSRKRPSFPNLTSFLG 322 (325)
T ss_dssp HHHTTC--CCCCCTTCCH-------------HHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHhcCC--CCCCCCcCCH-------------HHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence 222211 1122333333 3455778899999999999999999985
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.1e-37 Score=305.16 Aligned_cols=160 Identities=20% Similarity=0.316 Sum_probs=138.4
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||+||+|+...++ +.||||+++........+++.+|+.+|++++|||||+++++|.++++.++||||
T Consensus 11 ~~~iG~G~fg~V~~~~~~~~~-----~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmEy 85 (322)
T d1s9ja_ 11 ISELGAGNGGVVFKVSHKPSG-----LVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 85 (322)
T ss_dssp EEEEECCSSCCEEEEEETTTT-----EEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred EEEEecCCCeEEEEEEECCCC-----cEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 367999999999999987765 899999998764444457899999999999999999999999999999999999
Q ss_pred ccCCcHHHHH-------------------------hc---ccccccCCCCccccccCeEEecCCCcc---------cccC
Q 007935 427 IRNGSLYAAL-------------------------HG---FGLNRLLPGTSKVTKNETIVTSGTGSR---------ISAI 469 (584)
Q Consensus 427 ~~~GsL~~~L-------------------------~~---~g~~~~~~~~~~i~~~~~~~~~~~~~~---------~~~g 469 (584)
|++|+|.+++ |. .-|+|++++|+.+..++.++..|||.+ ..+|
T Consensus 86 ~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~~G 165 (322)
T d1s9ja_ 86 MDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG 165 (322)
T ss_dssp CTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHTC---CC
T ss_pred CCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCCCEEEeeCCCccccCCCccccccC
Confidence 9999996554 42 247899999999988889999999853 2479
Q ss_pred CCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCC
Q 007935 470 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPE 512 (584)
Q Consensus 470 t~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~ 512 (584)
|+.|||||++.. ..|+.++||||+||++|||+||+.||.+..
T Consensus 166 T~~Y~APEvl~~-~~y~~~~DiWSlGvil~ell~G~~Pf~~~~ 207 (322)
T d1s9ja_ 166 TRSYMSPERLQG-THYSVQSDIWSMGLSLVEMAVGRYPIPPPD 207 (322)
T ss_dssp SSCCCCHHHHHC-SCCCTTHHHHHHHHHHHHHHHSSCCSSCCC
T ss_pred CccccCchHHcC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence 999999999654 789999999999999999999999997643
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=8e-37 Score=301.65 Aligned_cols=219 Identities=22% Similarity=0.296 Sum_probs=173.4
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
..+.||+|+||+||+|+..........+.||||+++........++|.+|+++|++++|||||+++++|.+.+..++|||
T Consensus 17 ~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~v~e 96 (301)
T d1lufa_ 17 YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFE 96 (301)
T ss_dssp EEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred EeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCceEEEEE
Confidence 35679999999999999865433444479999999876555556889999999999999999999999999999999999
Q ss_pred cccCCcHHHHHhc---------------------------------------------------ccccccCCCCcccccc
Q 007935 426 FIRNGSLYAALHG---------------------------------------------------FGLNRLLPGTSKVTKN 454 (584)
Q Consensus 426 y~~~GsL~~~L~~---------------------------------------------------~g~~~~~~~~~~i~~~ 454 (584)
|+++|+|.++|+. .-|+++++.|+.+..+
T Consensus 97 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp~NILld~~ 176 (301)
T d1lufa_ 97 YMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGEN 176 (301)
T ss_dssp CCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG
T ss_pred ecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEEcccceEECCC
Confidence 9999999888752 1378888899888888
Q ss_pred CeEEecCCCccc-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCC-CCCCCCCCCCCcHHH
Q 007935 455 ETIVTSGTGSRI-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR-LPDAGPENDGKGLES 520 (584)
Q Consensus 455 ~~~~~~~~~~~~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~-~p~~~~~~~~~~l~~ 520 (584)
..++..|||.+. ..||+.|||||++.. ..|+.|+|||||||++|||++|. +||.+. ...+
T Consensus 177 ~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~-----~~~e 250 (301)
T d1lufa_ 177 MVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFY-NRYTTESDVWAYGVVLWEIFSYGLQPYYGM-----AHEE 250 (301)
T ss_dssp GCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCTTTTS-----CHHH
T ss_pred CcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHcc-CCCChhhhhccchhhHHHHHccCCCCCCCC-----CHHH
Confidence 888888887432 357888999999655 68999999999999999999986 566542 2333
Q ss_pred HHHHHhhcCC-CCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 521 LVRKAFRERR-PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 521 ~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
.......... +.++.+++ ++.+|+.+||+.||++||||.||+++|++|++
T Consensus 251 ~~~~v~~~~~~~~p~~~~~-------------~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~~ 301 (301)
T d1lufa_ 251 VIYYVRDGNILACPENCPL-------------ELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 301 (301)
T ss_dssp HHHHHHTTCCCCCCTTCCH-------------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred HHHHHHcCCCCCCCccchH-------------HHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 3333333222 12222222 35568888999999999999999999999874
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=9.2e-37 Score=297.74 Aligned_cols=217 Identities=22% Similarity=0.230 Sum_probs=162.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCc----e
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDE----K 420 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~----~ 420 (584)
.+.||+|+||+||+|+...++ +.||||+++... .....+.|.+|++++++++|||||++++++...+. .
T Consensus 12 ~~~lG~G~fg~Vy~a~~~~~~-----~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~ 86 (277)
T d1o6ya_ 12 GEILGFGGMSEVHLARDLRLH-----RDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 86 (277)
T ss_dssp EEEEEECSSEEEEEEEETTTT-----EEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred eEEEeeCCCeEEEEEEECCCC-----CEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceE
Confidence 467999999999999987765 899999997652 23345679999999999999999999999987654 7
Q ss_pred eEeeecccCCcHHHHH-------------------------hcc--cccccCCCCccccccCeEEecCCCc---------
Q 007935 421 LLISDFIRNGSLYAAL-------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGS--------- 464 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~~L-------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~--------- 464 (584)
|+||||+++|+|.+++ |+. -|+|++++|+.+..+......+++.
T Consensus 87 ~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~~~ 166 (277)
T d1o6ya_ 87 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 166 (277)
T ss_dssp EEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSCEEECCCTTCEECC----
T ss_pred EEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCccccceeehhhhhhhhccccc
Confidence 8999999999996554 443 4788999998887777666655542
Q ss_pred -----ccccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChh
Q 007935 465 -----RISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPA 539 (584)
Q Consensus 465 -----~~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~ 539 (584)
....||+.|||||++. +..++.++|||||||++|||+||+.||.+. ...+............+....+.
T Consensus 167 ~~~~~~~~~Gt~~Y~aPE~~~-~~~~~~~~DiwSlGvilyelltG~~Pf~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 240 (277)
T d1o6ya_ 167 SVTQTAAVIGTAQYLSPEQAR-GDSVDARSDVYSLGCVLYEVLTGEPPFTGD-----SPVSVAYQHVREDPIPPSARHEG 240 (277)
T ss_dssp ------------TTCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSSCSCCCS-----SHHHHHHHHHHCCCCCGGGTSSS
T ss_pred cccccccccCcccccCHHHHc-CCCCCcceecccchHHHHHHHhCCCCCCCc-----CHHHHHHHHHhcCCCCCchhccC
Confidence 1236899999999954 468999999999999999999999999742 23334444444433222222222
Q ss_pred hhhhhhHHHHHHHHHHHHhcccCCCCCCCC-ChHHHHHHHHhhhc
Q 007935 540 LVKEIHAKRQVLATFHIALNCTELDPEFRP-RMRTVSESLDRVKL 583 (584)
Q Consensus 540 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RP-t~~ev~~~L~~i~~ 583 (584)
+. .++.+++.+||++||++|| |++++...|.+++.
T Consensus 241 ~s---------~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~n 276 (277)
T d1o6ya_ 241 LS---------ADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 276 (277)
T ss_dssp CC---------HHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHC
T ss_pred CC---------HHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHhC
Confidence 21 1345577889999999999 89999999998864
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.6e-37 Score=297.53 Aligned_cols=216 Identities=20% Similarity=0.325 Sum_probs=163.3
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
..+.||+|+||.||+|++...+.. ...||||.++........+.|.+|+++|++++|||||+++|+|. ++..++|||
T Consensus 11 l~~~iG~G~fg~Vy~a~~~~~~~~--~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~iv~E 87 (273)
T d1mp8a_ 11 LGRCIGEGQFGDVHQGIYMSPENP--ALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIME 87 (273)
T ss_dssp EEEEEEECSSSEEEEEEECCC--C--CEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred EEEEEeeCCCcEEEEEEEecCCce--eEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEEEEE
Confidence 356899999999999988654321 26899999987655555688999999999999999999999985 578999999
Q ss_pred cccCCcHHHHHh--------------------------cc--cccccCCCCccccccCeEEecCCCccc-----------
Q 007935 426 FIRNGSLYAALH--------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI----------- 466 (584)
Q Consensus 426 y~~~GsL~~~L~--------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~----------- 466 (584)
|+++|+|.+++. +. -|+++++.|+.+..+..++..|||.+.
T Consensus 88 ~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~~~~~ 167 (273)
T d1mp8a_ 88 LCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS 167 (273)
T ss_dssp CCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC----------------
T ss_pred eccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCCCcEEEccchhheeccCCcceecc
Confidence 999999976543 22 478888999888888888888887432
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC-CCCccccChhhhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER-RPLSEVIDPALVKE 543 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~d~~~~~~ 543 (584)
..||+.|||||++.. ..++.++|||||||++|||+| |++||.+.... +......... .+.+..+++.
T Consensus 168 ~~~gt~~y~apE~l~~-~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~-----~~~~~i~~~~~~~~~~~~~~~---- 237 (273)
T d1mp8a_ 168 KGKLPIKWMAPESINF-RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-----DVIGRIENGERLPMPPNCPPT---- 237 (273)
T ss_dssp ---CCGGGCCHHHHHH-CCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-----GHHHHHHTTCCCCCCTTCCHH----
T ss_pred ceecCcccchhhHhcc-CCCCCccccccchHHHHHHHhcCCCCCCCCCHH-----HHHHHHHcCCCCCCCCCCCHH----
Confidence 357889999999655 689999999999999999998 89998753321 2222222222 2233333333
Q ss_pred hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 544 IHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 544 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
+.+++.+||+.||++|||+.||++.|++|.+
T Consensus 238 ---------~~~li~~cl~~dp~~Rps~~ei~~~L~~i~~ 268 (273)
T d1mp8a_ 238 ---------LYSLMTKCWAYDPSRRPRFTELKAQLSTILE 268 (273)
T ss_dssp ---------HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---------HHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 4457778999999999999999999998753
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-36 Score=298.05 Aligned_cols=210 Identities=17% Similarity=0.202 Sum_probs=160.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-----cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCcee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-----ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKL 421 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-----~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~ 421 (584)
.+.||+|+||+||+|+...++ +.||||+++... .....+.|.+|+++|++++|||||++++++.+++..|
T Consensus 15 ~~~lG~G~fg~Vy~~~~~~~~-----~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ 89 (293)
T d1jksa_ 15 GEELGSGQFAVVKKCREKSTG-----LQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 89 (293)
T ss_dssp EEEEEECSSEEEEEEEETTTC-----CEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred eEEEecCCCeEEEEEEECCCC-----CEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence 468999999999999987765 899999997542 1123478999999999999999999999999999999
Q ss_pred EeeecccCCcHHHHHhc-------------------------c--cccccCCCCccccccC----eEEecCCCcc-----
Q 007935 422 LISDFIRNGSLYAALHG-------------------------F--GLNRLLPGTSKVTKNE----TIVTSGTGSR----- 465 (584)
Q Consensus 422 lV~Ey~~~GsL~~~L~~-------------------------~--g~~~~~~~~~~i~~~~----~~~~~~~~~~----- 465 (584)
+|||||++|+|.++|.. . -|++++++|+.+..++ .++..++|.+
T Consensus 90 iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~ 169 (293)
T d1jksa_ 90 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF 169 (293)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTT
T ss_pred EEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhhhhcCC
Confidence 99999999999766642 2 4688888888776554 3666777643
Q ss_pred -----cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhh
Q 007935 466 -----ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPAL 540 (584)
Q Consensus 466 -----~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~ 540 (584)
...||+.|||||++. +..++.++|||||||++|||+||+.||.+. ...+.................+.+
T Consensus 170 ~~~~~~~~~t~~y~APE~~~-~~~~~~~~DiwSlGvilyell~g~~Pf~~~-----~~~~~~~~i~~~~~~~~~~~~~~~ 243 (293)
T d1jksa_ 170 GNEFKNIFGTPEFVAPEIVN-YEPLGLEADMWSIGVITYILLSGASPFLGD-----TKQETLANVSAVNYEFEDEYFSNT 243 (293)
T ss_dssp SCBCSCCCCCGGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHTTCCCCCHHHHTTS
T ss_pred CccccccCCCCcccCHHHHc-CCCCCCcccchhhhHHHHHHHcCCCCCCCC-----CHHHHHHHHHhcCCCCCchhcCCC
Confidence 246899999999955 468999999999999999999999999742 233334443333322221111111
Q ss_pred hhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 541 VKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 541 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
...+.+++.+||+.||++|||++|+++
T Consensus 244 ---------s~~~~~li~~~L~~dP~~R~s~~eil~ 270 (293)
T d1jksa_ 244 ---------SALAKDFIRRLLVKDPKKRMTIQDSLQ 270 (293)
T ss_dssp ---------CHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ---------CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 124556888899999999999999975
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-36 Score=301.18 Aligned_cols=215 Identities=22% Similarity=0.290 Sum_probs=164.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||+||+|++.+++. ...||||+++........++|.+|+++|+++ +|||||+++|+|.+++..++|||
T Consensus 15 ~~~iG~G~fg~Vy~~~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV~e 91 (309)
T d1fvra_ 15 QDVIGEGNFGQVLKARIKKDGL---RMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIE 91 (309)
T ss_dssp EEEEECGGGCEEEEEEEEETTE---EEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred EEEEeeCCCcEEEEEEECCCCe---EEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEEEE
Confidence 5689999999999999877641 1368999987654444557899999999999 79999999999999999999999
Q ss_pred cccCCcHHHHHhcc-------------------------------------------cccccCCCCccccccCeEEecCC
Q 007935 426 FIRNGSLYAALHGF-------------------------------------------GLNRLLPGTSKVTKNETIVTSGT 462 (584)
Q Consensus 426 y~~~GsL~~~L~~~-------------------------------------------g~~~~~~~~~~i~~~~~~~~~~~ 462 (584)
|+++|+|.++|+.. -|+++++.|+.+..+..++..|+
T Consensus 92 y~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~~~~kl~Df 171 (309)
T d1fvra_ 92 YAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADF 171 (309)
T ss_dssp CCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCT
T ss_pred ecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEcCCCceEEccc
Confidence 99999999888531 35788888888877788888888
Q ss_pred Ccc----------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCC-CCCCCCCCCCcHHHHHHHHhhcC-C
Q 007935 463 GSR----------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRL-PDAGPENDGKGLESLVRKAFRER-R 530 (584)
Q Consensus 463 ~~~----------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~-p~~~~~~~~~~l~~~~~~~~~~~-~ 530 (584)
|.. ...||..|+|||.+.. ..++.++|||||||++|||++|.. ||.+ ....++........ .
T Consensus 172 G~a~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDvwSfGvil~ell~~~~~p~~~-----~~~~~~~~~i~~~~~~ 245 (309)
T d1fvra_ 172 GLSRGQEVYVKKTMGRLPVRWMAIESLNY-SVYTTNSDVWSYGVLLWEIVSLGGTPYCG-----MTCAELYEKLPQGYRL 245 (309)
T ss_dssp TCEESSCEECCC----CCTTTCCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCTTTT-----CCHHHHHHHGGGTCCC
T ss_pred cccccccccccccceecCCcccchHHhcc-CCCCccceeehhHHHHHHHHhcCCCCCCC-----CCHHHHHHHHHhcCCC
Confidence 753 2368999999999665 689999999999999999999765 5653 23444444443322 2
Q ss_pred CCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 531 PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 531 ~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
+.+..+++ ++.+++.+||+.||++||||.||++.|+++.+
T Consensus 246 ~~~~~~~~-------------~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~ 285 (309)
T d1fvra_ 246 EKPLNCDD-------------EVYDLMRQCWREKPYERPSFAQILVSLNRMLE 285 (309)
T ss_dssp CCCTTBCH-------------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCccCCH-------------HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 22233333 34457778999999999999999999998754
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.3e-36 Score=293.47 Aligned_cols=209 Identities=22% Similarity=0.300 Sum_probs=162.3
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
..+.||+|+||.||+|++.++ ..||||+++..... .+.|.+|+.++++++|||||+++|+|. +++.++|||
T Consensus 21 i~~~iG~G~fg~Vy~~~~~~~------~~vAiK~l~~~~~~--~~~~~~E~~~l~~l~h~nIv~~~g~~~-~~~~~lv~E 91 (285)
T d1fmka3 21 LEVKLGQGCFGEVWMGTWNGT------TRVAIKTLKPGTMS--PEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTE 91 (285)
T ss_dssp EEEEEEECSSCEEEEEEETTT------EEEEEEECCTTSSC--HHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEC
T ss_pred EeeEEeeCCCeEEEEEEECCC------CEEEEEEECcccCC--HHHHHHHHHHHHhcccCCEeEEEEEEe-cCCeEEEEE
Confidence 456799999999999999876 68999999765333 378999999999999999999999984 567899999
Q ss_pred cccCCcHHHHHh---------------------------cc--cccccCCCCccccccCeEEecCCCccc----------
Q 007935 426 FIRNGSLYAALH---------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 426 y~~~GsL~~~L~---------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
||++|+|..+++ .. -|+++++.|+.+..+..++..|+|.+.
T Consensus 92 y~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 171 (285)
T d1fmka3 92 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 171 (285)
T ss_dssp CCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC----------
T ss_pred ecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECCCCcEEEcccchhhhccCCCceee
Confidence 999999865553 33 468888889888888888888887432
Q ss_pred --ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcC-CCCccccChhhhhh
Q 007935 467 --SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER-RPLSEVIDPALVKE 543 (584)
Q Consensus 467 --~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~d~~~~~~ 543 (584)
..||+.|+|||++.. ..++.++|||||||++|||+||..|+... ....++........ .+.+..+++
T Consensus 172 ~~~~gt~~y~aPE~~~~-~~~~~ksDI~S~Giil~el~t~~~p~~~~----~~~~~~~~~i~~~~~~~~~~~~~~----- 241 (285)
T d1fmka3 172 QGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELTTKGRVPYPG----MVNREVLDQVERGYRMPCPPECPE----- 241 (285)
T ss_dssp ----CCGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCSSTT----CCHHHHHHHHHTTCCCCCCTTSCH-----
T ss_pred ccccccccccChHHHhC-CCCCcHHhhhcchHHHHHHHhCCCCCCCC----CCHHHHHHHHHhcCCCCCCcccCH-----
Confidence 357899999999665 68999999999999999999977665532 22333333333222 222333333
Q ss_pred hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhh
Q 007935 544 IHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581 (584)
Q Consensus 544 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 581 (584)
++.+++.+||+.||++||||.+|+++|+..
T Consensus 242 --------~l~~li~~cl~~dP~~Rps~~~i~~~L~~~ 271 (285)
T d1fmka3 242 --------SLHDLMCQCWRKEPEERPTFEYLQAFLEDY 271 (285)
T ss_dssp --------HHHHHHHHHTCSSGGGSCCHHHHHHHHHTT
T ss_pred --------HHHHHHHHHcccCHhHCcCHHHHHHHHhhh
Confidence 345678889999999999999999999875
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=3.3e-36 Score=298.25 Aligned_cols=206 Identities=19% Similarity=0.258 Sum_probs=168.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC--CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG--DATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||+||+|+...++ +.||||+++.. ......+.+.+|+.++++++|||||++++++.+++..|+||
T Consensus 9 ~~~lG~G~fg~Vy~a~~~~~g-----~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm 83 (316)
T d1fota_ 9 LRTLGTGSFGRVHLIRSRHNG-----RYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 83 (316)
T ss_dssp EEEEEECSSCEEEEEEETTTC-----CEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred EEEEecCcCcEEEEEEECCCC-----CEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence 468999999999999987765 89999999754 22233578999999999999999999999999999999999
Q ss_pred ecccCCcHHH-------------------------HHhccc--ccccCCCCccccccCeEEecCCCcc--------cccC
Q 007935 425 DFIRNGSLYA-------------------------ALHGFG--LNRLLPGTSKVTKNETIVTSGTGSR--------ISAI 469 (584)
Q Consensus 425 Ey~~~GsL~~-------------------------~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~--------~~~g 469 (584)
|||++|+|.. |||+.| |+|++++|+.+..++.++..|||.. ..+|
T Consensus 84 E~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~G 163 (316)
T d1fota_ 84 DYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCG 163 (316)
T ss_dssp CCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCCCS
T ss_pred eecCCccccccccccccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEcCCCCEEEecCccceEeccccccccC
Confidence 9999999854 445444 6889999999988888999888753 2479
Q ss_pred CCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHHH
Q 007935 470 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQ 549 (584)
Q Consensus 470 t~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 549 (584)
|+.|||||++ .+..|+.++||||+||++|||+||+.||.+ ....+...........++..+++++.+
T Consensus 164 t~~Y~APE~l-~~~~y~~~~DiwSlGvilyemltG~~Pf~~-----~~~~~~~~~i~~~~~~~p~~~s~~~~~------- 230 (316)
T d1fota_ 164 TPDYIAPEVV-STKPYNKSIDWWSFGILIYEMLAGYTPFYD-----SNTMKTYEKILNAELRFPPFFNEDVKD------- 230 (316)
T ss_dssp CTTTCCHHHH-TTCCBCTTHHHHHHHHHHHHHHHSSCTTCC-----SSHHHHHHHHHHCCCCCCTTSCHHHHH-------
T ss_pred cccccCHHHH-cCCCCCchhhccccchhHHHHHhCCCCCCC-----cCHHHHHHHHHcCCCCCCCCCCHHHHH-------
Confidence 9999999995 446899999999999999999999999974 234455555555555555556655544
Q ss_pred HHHHHHHHhcccCCCCCCCC-----ChHHHHH
Q 007935 550 VLATFHIALNCTELDPEFRP-----RMRTVSE 576 (584)
Q Consensus 550 ~~~~~~l~~~Cl~~~P~~RP-----t~~ev~~ 576 (584)
++.+||+.||.+|| |++|+++
T Consensus 231 ------li~~~L~~dp~~R~~~~r~t~~~il~ 256 (316)
T d1fota_ 231 ------LLSRLITRDLSQRLGNLQNGTEDVKN 256 (316)
T ss_dssp ------HHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred ------HHHHHhhhCHHhccccchhhHHHHHc
Confidence 56669999999996 8888875
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.6e-36 Score=299.04 Aligned_cols=216 Identities=21% Similarity=0.322 Sum_probs=162.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.++||+|+||+||+|++...+... ...||||+++........++|.+|++++++++|||||+++|+|.+ +..++++||
T Consensus 14 ~~~lG~G~fG~Vy~~~~~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~-~~~~~v~e~ 91 (317)
T d1xkka_ 14 IKVLGSGAFGTVYKGLWIPEGEKV-KIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQL 91 (317)
T ss_dssp EEEEEECSSEEEEEEEECC----C-CEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEEC
T ss_pred eeEEecCCCeEEEEEEEcCCCCEE-EEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCeeEEEEe
Confidence 468999999999999987654222 257999999876555556889999999999999999999999976 467888999
Q ss_pred ccCCcHHHHH--------------------------hcc--cccccCCCCccccccCeEEecCCCccc------------
Q 007935 427 IRNGSLYAAL--------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSRI------------ 466 (584)
Q Consensus 427 ~~~GsL~~~L--------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~------------ 466 (584)
+.+|+|.+++ |+. -|+++++.|+.+..+..++..|||.+.
T Consensus 92 ~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~ 171 (317)
T d1xkka_ 92 MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 171 (317)
T ss_dssp CTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTCC-----
T ss_pred ccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCCCCeEeeccccceeccccccccccc
Confidence 9999996544 333 478899999988888888888887421
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEI 544 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~ 544 (584)
..||+.|||||++.. ..|+.++|||||||++|||+| |+.||.+... ..+...+.... +.+.++.+++.
T Consensus 172 ~~~gt~~y~APE~l~~-~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~--~~~~~~i~~~~--~~~~p~~~~~~----- 241 (317)
T d1xkka_ 172 GGKVPIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEKGE--RLPQPPICTID----- 241 (317)
T ss_dssp ---CCTTTSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCG--GGHHHHHHHTC--CCCCCTTBCHH-----
T ss_pred ccccCccccChHHHhc-CCCChhhhhhhHHHHHHHHHHCCCCCCCCCCH--HHHHHHHHcCC--CCCCCcccCHH-----
Confidence 257899999999665 689999999999999999999 7888875332 22333332221 12223334333
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
+.+++.+||+.||++||||.||++.|+++.
T Consensus 242 --------~~~li~~cl~~dP~~RPs~~eil~~l~~~~ 271 (317)
T d1xkka_ 242 --------VYMIMVKCWMIDADSRPKFRELIIEFSKMA 271 (317)
T ss_dssp --------HHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --------HHHHHHHhCCCChhhCcCHHHHHHHHHHHH
Confidence 445778899999999999999999998774
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=5.2e-36 Score=300.66 Aligned_cols=209 Identities=16% Similarity=0.222 Sum_probs=163.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|+...++ +.||||++..... ...+.+.+|+++|++++|||||++++++.+++..|+||||
T Consensus 31 ~~~lG~G~fg~Vy~~~~~~~g-----~~vAvK~i~~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~ 104 (350)
T d1koaa2 31 HEELGTGAFGVVHRVTERATG-----NNFAAKFVMTPHE-SDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 104 (350)
T ss_dssp EEEEEEETTEEEEEEEETTTT-----EEEEEEEECCCSH-HHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECC
T ss_pred EEEEecCcCeEEEEEEECCCC-----CEEEEEEEcccch-hhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 467999999999999987765 8999999976533 3347899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHh--------------------------cc--cccccCCCCccccc--cCeEEecCCCccc----------
Q 007935 427 IRNGSLYAALH--------------------------GF--GLNRLLPGTSKVTK--NETIVTSGTGSRI---------- 466 (584)
Q Consensus 427 ~~~GsL~~~L~--------------------------~~--g~~~~~~~~~~i~~--~~~~~~~~~~~~~---------- 466 (584)
|++|+|.+++. +. .|+|++++|+.+.. ++.++..|||.+.
T Consensus 105 ~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~ 184 (350)
T d1koaa2 105 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV 184 (350)
T ss_dssp CCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSCEEE
T ss_pred CCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCCCCeEEEeecchheecccccccce
Confidence 99999977763 22 47888999987754 3567788887432
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhH
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 546 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 546 (584)
..||+.|||||++. +..|+.++||||+||++|||+||+.||.+. ...+.................+.+ .
T Consensus 185 ~~gT~~Y~aPEv~~-~~~~~~~~DiwSlGvilyell~G~~Pf~~~-----~~~~~~~~i~~~~~~~~~~~~~~~----s- 253 (350)
T d1koaa2 185 TTGTAEFAAPEVAE-GKPVGYYTDMWSVGVLSYILLSGLSPFGGE-----NDDETLRNVKSCDWNMDDSAFSGI----S- 253 (350)
T ss_dssp ECSCTTTCCHHHHH-TCCBCHHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHTCCCSCCGGGGGC----C-
T ss_pred ecCcccccCHHHHc-CCCCChhHhhhhhhHHHHHHHhCCCCCCCC-----CHHHHHHHHHhCCCCCCcccccCC----C-
Confidence 47899999999954 478999999999999999999999999742 334444444443332222111111 1
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 547 KRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 547 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
..+.+++.+||+.||++|||++|+++
T Consensus 254 ----~~~~~li~~~L~~dP~~R~t~~eil~ 279 (350)
T d1koaa2 254 ----EDGKDFIRKLLLADPNTRMTIHQALE 279 (350)
T ss_dssp ----HHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred ----HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 13456778899999999999999986
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-36 Score=299.09 Aligned_cols=220 Identities=20% Similarity=0.260 Sum_probs=168.3
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
..+.||+|+||.||+|++.........+.||||+++........++|.+|+.+++++ +|||||+++|+|.+++..++||
T Consensus 27 l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~~lvm 106 (311)
T d1t46a_ 27 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVIT 106 (311)
T ss_dssp EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred EeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEEEEEE
Confidence 357899999999999998654334455899999998765555567899999999999 7999999999999999999999
Q ss_pred ecccCCcHHHHHhc-------------------------------------------c--cccccCCCCccccccCeEEe
Q 007935 425 DFIRNGSLYAALHG-------------------------------------------F--GLNRLLPGTSKVTKNETIVT 459 (584)
Q Consensus 425 Ey~~~GsL~~~L~~-------------------------------------------~--g~~~~~~~~~~i~~~~~~~~ 459 (584)
|||++|+|.++|+. . -|+|++++|+.+..+...+.
T Consensus 107 E~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~~~~~~~ki 186 (311)
T d1t46a_ 107 EYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKI 186 (311)
T ss_dssp ECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEE
T ss_pred EcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeecccccccccccccCcccc
Confidence 99999999877642 1 36888888888877787888
Q ss_pred cCCCccc-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhC-CCCCCCCCCCCCcHHHHHHHH
Q 007935 460 SGTGSRI-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTG-RLPDAGPENDGKGLESLVRKA 525 (584)
Q Consensus 460 ~~~~~~~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG-~~p~~~~~~~~~~l~~~~~~~ 525 (584)
.++|... ..||+.|||||++.. ..++.++|||||||++|||+|+ ++||.... ....+..++...
T Consensus 187 ~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~-~~~~~~~~i~~~ 264 (311)
T d1t46a_ 187 CDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFN-CVYTFESDVWSYGIFLWELFSLGSSPYPGMP-VDSKFYKMIKEG 264 (311)
T ss_dssp CCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC-SSHHHHHHHHHT
T ss_pred cccchheeccCCCcceEeeecccChHHcCHHHhcC-CCCCCcccccchHHHHHHHHhCCCCCCCCCC-HHHHHHHHHhcC
Confidence 7776332 367889999999665 6899999999999999999995 44454322 222223333322
Q ss_pred hhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 526 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 526 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.+. ..+...++ .+.+|+.+||+.||++||||.||+++|+++-
T Consensus 265 ~~~--~~~~~~~~-------------~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i 306 (311)
T d1t46a_ 265 FRM--LSPEHAPA-------------EMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 306 (311)
T ss_dssp CCC--CCCTTSCH-------------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCC--CCcccccH-------------HHHHHHHHHcCCChhHCcCHHHHHHHHHHhh
Confidence 211 11222232 3456788899999999999999999998753
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=6.5e-36 Score=300.20 Aligned_cols=209 Identities=16% Similarity=0.216 Sum_probs=162.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||+||+|+...++ +.||||+++.... ...+.+.+|+++|++++|||||++++++.+++..|+||||
T Consensus 34 ~~~lG~G~fg~V~~a~~~~~~-----~~vAiK~i~~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~ 107 (352)
T d1koba_ 34 LEELGSGAFGVVHRCVEKATG-----RVFVAKFINTPYP-LDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 107 (352)
T ss_dssp EEEEEEETTEEEEEEEETTTC-----CEEEEEEEECCSH-HHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred EEEEecCCCeEEEEEEECCCC-----CEEEEEEECCcch-hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 468999999999999987665 8999999987532 2346789999999999999999999999999999999999
Q ss_pred ccCCcHHHHH--------------------------hcc--cccccCCCCcccc--ccCeEEecCCCccc----------
Q 007935 427 IRNGSLYAAL--------------------------HGF--GLNRLLPGTSKVT--KNETIVTSGTGSRI---------- 466 (584)
Q Consensus 427 ~~~GsL~~~L--------------------------~~~--g~~~~~~~~~~i~--~~~~~~~~~~~~~~---------- 466 (584)
|++|+|.+++ |+. -|+|++++|+.+. .++.++..|||.+.
T Consensus 108 ~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~~~~ 187 (352)
T d1koba_ 108 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKV 187 (352)
T ss_dssp CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEE
T ss_pred CCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccccCCCeEEEeecccceecCCCCceee
Confidence 9999996554 333 4688999998876 34677888887532
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhH
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 546 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 546 (584)
..||+.|||||++. +..|+.++||||+||++|||+||+.||.+. ...............++....+.+.
T Consensus 188 ~~gt~~y~aPE~~~-~~~~~~~~DiwSlGvilyelltG~~Pf~~~-----~~~~~~~~i~~~~~~~~~~~~~~~s----- 256 (352)
T d1koba_ 188 TTATAEFAAPEIVD-REPVGFYTDMWAIGVLGYVLLSGLSPFAGE-----DDLETLQNVKRCDWEFDEDAFSSVS----- 256 (352)
T ss_dssp ECSSGGGCCHHHHT-TCCBCHHHHHHHHHHHHHHHHHSCCSSCCS-----SHHHHHHHHHHCCCCCCSSTTTTSC-----
T ss_pred ccCcccccCHHHHc-CCCCCCccchHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHhCCCCCCcccccCCC-----
Confidence 47899999999954 478999999999999999999999999742 2333444444433322221111111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 547 KRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 547 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.++.+++.+||+.||.+|||+.|+++
T Consensus 257 ----~~~~~li~~~L~~dp~~R~s~~eil~ 282 (352)
T d1koba_ 257 ----PEAKDFIKNLLQKEPRKRLTVHDALE 282 (352)
T ss_dssp ----HHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred ----HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 13456788899999999999999975
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.7e-36 Score=291.89 Aligned_cols=214 Identities=21% Similarity=0.295 Sum_probs=156.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC--CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG--DATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|++....+ ....||||+++.. ......++|.+|+++|++++|||||+++|+|.+ +..++||
T Consensus 13 ~~~iG~G~fg~Vy~~~~~~~~~--~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~lv~ 89 (273)
T d1u46a_ 13 LEKLGDGSFGVVRRGEWDAPSG--KTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMKMVT 89 (273)
T ss_dssp EEECC----CCCEEEEEECTTS--CEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred EEEEecCCCeEEEEEEEECCCC--cEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchheee
Confidence 3579999999999998754321 2257999999765 233445789999999999999999999999965 5778999
Q ss_pred ecccCCcHHHHH--------------------------hcc--cccccCCCCccccccCeEEecCCCccc----------
Q 007935 425 DFIRNGSLYAAL--------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 425 Ey~~~GsL~~~L--------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
|||++|++.+++ |.. -|+++++.|+.+..+..++..|||...
T Consensus 90 e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~~~~~~ 169 (273)
T d1u46a_ 90 ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV 169 (273)
T ss_dssp ECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEE
T ss_pred eeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccccccceeeccchhhhhcccCCCcce
Confidence 999999986554 333 368888889888888888888887432
Q ss_pred ----ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCC--CccccChh
Q 007935 467 ----SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP--LSEVIDPA 539 (584)
Q Consensus 467 ----~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~d~~ 539 (584)
..|+..|||||++.. ..++.++|||||||++|||+| |+.||.+ ....+........... .++.+++
T Consensus 170 ~~~~~~~~~~~~aPE~~~~-~~~~~~~Di~S~Gvil~emlt~G~~Pf~~-----~~~~~~~~~i~~~~~~~~~~~~~~~- 242 (273)
T d1u46a_ 170 MQEHRKVPFAWCAPESLKT-RTFSHASDTWMFGVTLWEMFTYGQEPWIG-----LNGSQILHKIDKEGERLPRPEDCPQ- 242 (273)
T ss_dssp C-----CCGGGCCHHHHHH-CEEEHHHHHHHHHHHHHHHHTTSCCTTTT-----CCHHHHHHHHHTSCCCCCCCTTCCH-
T ss_pred ecCccccCcccCCHHHHhC-CCCCcchhhhhhHHHHHHHHhCCCCCCCC-----cCHHHHHHHHHhCCCCCCCcccccH-
Confidence 246788999999665 689999999999999999998 8999974 2334444444443322 2222332
Q ss_pred hhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 540 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.+.+++.+||+.||++||||.||.+.|++.+
T Consensus 243 ------------~l~~li~~cl~~dp~~RPt~~ei~~~L~~~~ 273 (273)
T d1u46a_ 243 ------------DIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ 273 (273)
T ss_dssp ------------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred ------------HHHHHHHHHcCCChhHCcCHHHHHHHHHhcC
Confidence 3456788899999999999999999998764
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.4e-36 Score=296.93 Aligned_cols=221 Identities=19% Similarity=0.268 Sum_probs=160.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHH--HHHHHHhcCCCceeeeeEEEEeCC----ce
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFES--EVEAIARVQHPNIVRLKAFYYAND----EK 420 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~--Ei~~l~~l~HpnIV~l~g~~~~~~----~~ 420 (584)
.+.||+|+||.||+|++. + +.||||+++.... +++.+ |+..+.+++|||||+++|+|.+++ ..
T Consensus 8 ~~~iG~G~fg~Vy~~~~~-g------~~vAvK~~~~~~~----~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~ 76 (303)
T d1vjya_ 8 QESIGKGRFGEVWRGKWR-G------EEVAVKIFSSREE----RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 76 (303)
T ss_dssp EEEEECCSSSEEEEEEET-T------EEEEEEEECGGGH----HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred EEEEeeCCCeEEEEEEEC-C------EEEEEEEECccch----hHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEE
Confidence 457999999999999974 3 7999999975322 34444 455556789999999999998765 57
Q ss_pred eEeeecccCCcHHHHHhc----------------------------------ccccccCCCCccccccCeEEecCCCcc-
Q 007935 421 LLISDFIRNGSLYAALHG----------------------------------FGLNRLLPGTSKVTKNETIVTSGTGSR- 465 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~~L~~----------------------------------~g~~~~~~~~~~i~~~~~~~~~~~~~~- 465 (584)
++|||||++|+|.++|++ .-|+|+++.|+.+..+..++..|||..
T Consensus 77 ~lv~Ey~~~g~L~~~l~~~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~ 156 (303)
T d1vjya_ 77 WLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 156 (303)
T ss_dssp EEEEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEecccCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCccc
Confidence 899999999999877653 137888888988888888888888732
Q ss_pred --------------cccCCCcccCccccccCC-----CCCCccchhhHHHHHHHHHhCCCCCCCCCCC----------CC
Q 007935 466 --------------ISAISNVYLAPEARIYGS-----KFTQKCDVYSFGIVLLEILTGRLPDAGPEND----------GK 516 (584)
Q Consensus 466 --------------~~~gt~~y~aPE~~~~~~-----~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~----------~~ 516 (584)
...||+.|||||++.... .++.|+|||||||++|||+||..||...... ..
T Consensus 157 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~ 236 (303)
T d1vjya_ 157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 236 (303)
T ss_dssp EEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred cccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccc
Confidence 236899999999854321 2677999999999999999998887532211 11
Q ss_pred cHHHHHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhcC
Q 007935 517 GLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKLQ 584 (584)
Q Consensus 517 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~ 584 (584)
............. ..|.+.......+....+.+++.+||+.||++||||.||++.|+++..|
T Consensus 237 ~~~~~~~~~~~~~------~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~ 298 (303)
T d1vjya_ 237 SVEEMRKVVCEQK------LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp CHHHHHHHHTTSC------CCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHhccc------cCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHh
Confidence 2222222222111 1122222222334556788899999999999999999999999998753
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-35 Score=295.67 Aligned_cols=206 Identities=20% Similarity=0.264 Sum_probs=168.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.++||+|+||.||+|+...++ +.||||++++.. .....+.+.+|+.+|++++|||||++++++.+++..|+||
T Consensus 10 ~~~lG~G~fg~V~~~~~~~~~-----~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~ 84 (337)
T d1o6la_ 10 LKLLGKGTFGKVILVREKATG-----RYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp EEEEEECSSEEEEEEEETTTC-----CEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred EEEEecCcCeEEEEEEECCCC-----CEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccce
Confidence 468999999999999987766 899999997641 2334578999999999999999999999999999999999
Q ss_pred ecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCccc-----------
Q 007935 425 DFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI----------- 466 (584)
Q Consensus 425 Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~----------- 466 (584)
|||++|+|.++++ +. -|+|++++|+.+..++.++..|||.+.
T Consensus 85 ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~~~~~ 164 (337)
T d1o6la_ 85 EYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT 164 (337)
T ss_dssp ECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBCC
T ss_pred eccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecCCCCEEEeecccccccccCCccccc
Confidence 9999999965553 33 478999999988888888888887532
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhH
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 546 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 546 (584)
.+||+.|||||++. +..|+.++||||+||++|||+||+.||.+ .+...+..........++..+++++.+
T Consensus 165 ~~GT~~Y~aPE~~~-~~~y~~~~DiwSlGvilyeml~G~~pf~~-----~~~~~~~~~i~~~~~~~p~~~s~~~~d---- 234 (337)
T d1o6la_ 165 FCGTPEYLAPEVLE-DNDYGRAVDWWGLGVVMYEMMCGRLPFYN-----QDHERLFELILMEEIRFPRTLSPEAKS---- 234 (337)
T ss_dssp CEECGGGCCGGGGS-SSCBCTTHHHHHHHHHHHHHHHSSCSSCC-----SSHHHHHHHHHHCCCCCCTTSCHHHHH----
T ss_pred ceeCHHHhhhhhcc-CCCCChhhcccchhhHHHHHHHCCCCCCC-----cCHHHHHHHHhcCCCCCCccCCHHHHH----
Confidence 36899999999954 47899999999999999999999999975 234455556666655566666665544
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCC-----hHHHHH
Q 007935 547 KRQVLATFHIALNCTELDPEFRPR-----MRTVSE 576 (584)
Q Consensus 547 ~~~~~~~~~l~~~Cl~~~P~~RPt-----~~ev~~ 576 (584)
++.+||++||.+||+ +.|+++
T Consensus 235 ---------li~~~L~~dP~~R~~~~~~~~~eil~ 260 (337)
T d1o6la_ 235 ---------LLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp ---------HHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred ---------HHHhhccCCchhhcccccccHHHHHc
Confidence 556699999999995 777764
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-35 Score=292.17 Aligned_cols=218 Identities=21% Similarity=0.286 Sum_probs=169.5
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
..+.||+|+||.||+|.+.........+.||||+++........+.|.+|++++++++|||||+++|+|..++..++|||
T Consensus 24 l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e 103 (308)
T d1p4oa_ 24 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME 103 (308)
T ss_dssp EEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred EeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCceeEEEe
Confidence 45789999999999999854221122278999999876555555779999999999999999999999999999999999
Q ss_pred cccCCcHHHHHhc-----------------------------------c--cccccCCCCccccccCeEEecCCCccc--
Q 007935 426 FIRNGSLYAALHG-----------------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI-- 466 (584)
Q Consensus 426 y~~~GsL~~~L~~-----------------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~-- 466 (584)
||++|+|.++++. . .|+++++.|+.+..+..++..|+|.+.
T Consensus 104 ~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~~~~Kl~DFGla~~~ 183 (308)
T d1p4oa_ 104 LMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 183 (308)
T ss_dssp CCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGG
T ss_pred ecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeecCCceEEEeecccceec
Confidence 9999999877642 1 367888888888888888888887432
Q ss_pred -----------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCC-CCCCCCCCCCCcHHHHHHHHhhcCC-CCc
Q 007935 467 -----------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR-LPDAGPENDGKGLESLVRKAFRERR-PLS 533 (584)
Q Consensus 467 -----------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~-~p~~~~~~~~~~l~~~~~~~~~~~~-~~~ 533 (584)
..||+.|||||.+.. ..++.++|||||||++|||+||+ .||.+ ....++......... +.+
T Consensus 184 ~~~~~~~~~~~~~~t~~y~aPe~l~~-~~~~~~~Dv~S~G~il~El~t~~~~p~~~-----~~~~~~~~~i~~~~~~~~p 257 (308)
T d1p4oa_ 184 YETDYYRKGGKGLLPVRWMSPESLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQG-----LSNEQVLRFVMEGGLLDKP 257 (308)
T ss_dssp GGGGCEEGGGSSEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHHTSCCTTTT-----SCHHHHHHHHHTTCCCCCC
T ss_pred cCCcceeeccceecccccCCHHHHcc-CCCCcccccccHHHHHHHHHhCCCCCCCC-----CCHHHHHHHHHhCCCCCCc
Confidence 257899999999655 68999999999999999999985 66653 333444444433322 122
Q ss_pred cccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 534 EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 534 ~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
..+++ .+.+++.+||+.||++||||.||+++|++..
T Consensus 258 ~~~~~-------------~l~~li~~cl~~~P~~RPs~~~il~~L~~~~ 293 (308)
T d1p4oa_ 258 DNCPD-------------MLFELMRMCWQYNPKMRPSFLEIISSIKEEM 293 (308)
T ss_dssp TTCCH-------------HHHHHHHHHTCSSGGGSCCHHHHHHHHGGGS
T ss_pred ccchH-------------HHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence 22322 4566888899999999999999999998764
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-35 Score=290.33 Aligned_cols=220 Identities=20% Similarity=0.298 Sum_probs=164.1
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCC-ceeEe
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYAND-EKLLI 423 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~-~~~lV 423 (584)
..+.||+|+||.||+|+....+.....+.||||+++........+.|.+|+.++.++ +|+|||++++++.+++ ..++|
T Consensus 17 ~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~~iv 96 (299)
T d1ywna1 17 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 96 (299)
T ss_dssp EEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEE
T ss_pred EeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCCeEEEE
Confidence 356899999999999998776555666899999998765555567899999998888 7899999999987754 68999
Q ss_pred eecccCCcHHHHHhc-------------------------------------------ccccccCCCCccccccCeEEec
Q 007935 424 SDFIRNGSLYAALHG-------------------------------------------FGLNRLLPGTSKVTKNETIVTS 460 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~~-------------------------------------------~g~~~~~~~~~~i~~~~~~~~~ 460 (584)
||||++|+|.++|+. .-|+|++++|+.+..+..++..
T Consensus 97 ~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl~~~~~~Kl~ 176 (299)
T d1ywna1 97 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKIC 176 (299)
T ss_dssp EECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEEC
T ss_pred EEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeECCCCcEEEc
Confidence 999999999888742 1478899999988888888888
Q ss_pred CCCccc-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCC-CCCCCCCCCCCcHHHHHHHHh
Q 007935 461 GTGSRI-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR-LPDAGPENDGKGLESLVRKAF 526 (584)
Q Consensus 461 ~~~~~~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~-~p~~~~~~~~~~l~~~~~~~~ 526 (584)
|||.+. ..||+.|||||++.. ..++.++|||||||++|||+||. .||.+.... ..+...+....
T Consensus 177 DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~-~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~-~~~~~~~~~~~ 254 (299)
T d1ywna1 177 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLKEGT 254 (299)
T ss_dssp C------CCSCTTSCCTTSCCCGGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS-HHHHHHHHHTC
T ss_pred cCcchhhccccccccccCceeeCccccchhHhhc-CCCCcccceeehHHHHHHHHhCCCCCCCCCCHH-HHHHHHHhcCC
Confidence 887431 368899999999655 68999999999999999999975 567643222 11222222211
Q ss_pred hcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 527 RERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 527 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
..+.++.++++ +.+++.+||+.||++||||.||++.|++|.
T Consensus 255 --~~~~~~~~~~~-------------l~~li~~cl~~dP~~Rpt~~eil~~L~~il 295 (299)
T d1ywna1 255 --RMRAPDYTTPE-------------MYQTMLDCWHGEPSQRPTFSELVEHLGNLL 295 (299)
T ss_dssp --CCCCCTTCCHH-------------HHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --CCCCCccCCHH-------------HHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 22223333333 455778899999999999999999999874
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=3e-35 Score=296.91 Aligned_cols=210 Identities=20% Similarity=0.238 Sum_probs=163.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHH---HHHHHhcCCCceeeeeEEEEeCCcee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESE---VEAIARVQHPNIVRLKAFYYANDEKL 421 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~E---i~~l~~l~HpnIV~l~g~~~~~~~~~ 421 (584)
.++||+|+||.||+|+...++ +.||||++.... .......+.+| +++++.++|||||++++++.+++..|
T Consensus 9 ~~~lG~G~fg~Vy~~~~~~t~-----~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~ 83 (364)
T d1omwa3 9 HRIIGRGGFGEVYGCRKADTG-----KMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 83 (364)
T ss_dssp EEEEEECSSCEEEEEEETTTC-----CEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred eeEEecCCCeEEEEEEECCCC-----CEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEE
Confidence 468999999999999988765 899999986531 11112334444 67777889999999999999999999
Q ss_pred EeeecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCccc--------
Q 007935 422 LISDFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI-------- 466 (584)
Q Consensus 422 lV~Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~-------- 466 (584)
+|||||++|+|.++|. .. -|+|++++|+.+..++.++..|||.+.
T Consensus 84 ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~~~~ 163 (364)
T d1omwa3 84 FILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH 163 (364)
T ss_dssp EEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSSCEEECCCTTCEECSSSCCC
T ss_pred EEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcCCCcEEEeeeceeeecCCCccc
Confidence 9999999999976664 22 478999999998888888888887432
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIH 545 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~ 545 (584)
..||+.|||||++..+..|+.++|||||||++|||+||+.||..... .......+........++..+++++.
T Consensus 164 ~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~--~~~~~~~~~~~~~~~~~~~~~s~~~~---- 237 (364)
T d1omwa3 164 ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT--KDKHEIDRMTLTMAVELPDSFSPELR---- 237 (364)
T ss_dssp SCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCS--SCHHHHHHHSSSCCCCCCSSSCHHHH----
T ss_pred ccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhcccCCCCCCCCCCHHHH----
Confidence 46999999999976666799999999999999999999999976332 23444444444444444555665554
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCC-----hHHHHH
Q 007935 546 AKRQVLATFHIALNCTELDPEFRPR-----MRTVSE 576 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RPt-----~~ev~~ 576 (584)
+++.+||+.||++||| ++|+++
T Consensus 238 ---------~li~~~L~~dP~~R~t~~~~~a~eil~ 264 (364)
T d1omwa3 238 ---------SLLEGLLQRDVNRRLGCLGRGAQEVKE 264 (364)
T ss_dssp ---------HHHHHHTCSSTTTSTTTSSSTHHHHHT
T ss_pred ---------HHHHHHcccCHHHhCCCcccCHHHHHc
Confidence 4666699999999999 577763
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-35 Score=290.64 Aligned_cols=220 Identities=16% Similarity=0.197 Sum_probs=158.6
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcc----hhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEe
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT----WRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLI 423 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~----~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV 423 (584)
++||+|+||+||+|+...++ +.||||+++..... ...+.+.+|+++|++++|||||++++++.+++..++|
T Consensus 4 ~~lG~G~fg~Vy~~~~~~~~-----~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~iv 78 (299)
T d1ua2a_ 4 DFLGEGQFATVYKARDKNTN-----QIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLV 78 (299)
T ss_dssp EEEEEETTEEEEEEECSSCC-----SEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEE
T ss_pred eEeccCcCeEEEEEEECCCC-----cEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeeh
Confidence 57999999999999988765 89999999754221 1235799999999999999999999999999999999
Q ss_pred eecccCCcHH-------------------------HHHhcc--cccccCCCCccccccCeEEecCCCccc----------
Q 007935 424 SDFIRNGSLY-------------------------AALHGF--GLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 424 ~Ey~~~GsL~-------------------------~~L~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
|||+++|++. +|||+. -|+|++++|+.+..++.++..|||.+.
T Consensus 79 mE~~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~~ 158 (299)
T d1ua2a_ 79 FDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYT 158 (299)
T ss_dssp EECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCC
T ss_pred hhhhcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEecCCCccccccCccccccCCCccccc
Confidence 9999988773 455554 478899999998888888888887432
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhc--CCCCcccc-------
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE--RRPLSEVI------- 536 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~------- 536 (584)
..||+.|||||++..+..|+.++|||||||++|||+||+.||.+.... ..+..+.+ .... ........
T Consensus 159 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~-~~l~~i~~-~~~~~~~~~~~~~~~~~~~~~ 236 (299)
T d1ua2a_ 159 HQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL-DQLTRIFE-TLGTPTEEQWPDMCSLPDYVT 236 (299)
T ss_dssp CSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHH-HHCCCCTTTSSSTTSSTTCCC
T ss_pred ceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHH-HHHHHHHH-hcCCCChhhccchhccchhhh
Confidence 358999999999766667899999999999999999999999752211 11111111 1110 00000000
Q ss_pred -----ChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 537 -----DPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 537 -----d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
...+.... ......+.+++.+||+.||++|||++|+++
T Consensus 237 ~~~~~~~~~~~~~--~~~s~~~~dll~~~L~~dP~~R~sa~e~L~ 279 (299)
T d1ua2a_ 237 FKSFPGIPLHHIF--SAAGDDLLDLIQGLFLFNPCARITATQALK 279 (299)
T ss_dssp CCCCCCCCHHHHC--TTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred hccCCCCChHHhc--ccCCHHHHHHHHHHccCChhhCcCHHHHhC
Confidence 00000000 011235678899999999999999999985
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.1e-35 Score=291.75 Aligned_cols=205 Identities=17% Similarity=0.258 Sum_probs=163.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHH-hcCCCceeeeeEEEEeCCceeEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIA-RVQHPNIVRLKAFYYANDEKLLI 423 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~-~l~HpnIV~l~g~~~~~~~~~lV 423 (584)
.+.||+|+||+||+|+...++ +.||||++++.. .....+.+.+|+.++. .++|||||++++++.+++..|+|
T Consensus 7 ~~~iG~G~fg~Vy~~~~~~t~-----~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv 81 (320)
T d1xjda_ 7 HKMLGKGSFGKVFLAEFKKTN-----QFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV 81 (320)
T ss_dssp EEEEEECSSSEEEEEEETTTT-----EEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred eeEEecCCCcEEEEEEECCCC-----CEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence 468999999999999998776 899999997541 2233467788888776 68999999999999999999999
Q ss_pred eecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCccc----------
Q 007935 424 SDFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
||||++|+|.++++ +. -|+++++.|+.+..++.++..++|...
T Consensus 82 mEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~~~~ 161 (320)
T d1xjda_ 82 MEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTN 161 (320)
T ss_dssp EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBC
T ss_pred EeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecCCCceeccccchhhhccccccccc
Confidence 99999999976664 33 468888899888888888888876432
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIH 545 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~ 545 (584)
..||+.|||||++.. ..|+.++||||+||++|||+||+.||.+ ....+...........++..+++++.
T Consensus 162 ~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvilyemltG~~PF~~-----~~~~~~~~~i~~~~~~~p~~~s~~~~---- 231 (320)
T d1xjda_ 162 TFCGTPDYIAPEILLG-QKYNHSVDWWSFGVLLYEMLIGQSPFHG-----QDEEELFHSIRMDNPFYPRWLEKEAK---- 231 (320)
T ss_dssp CCCSCGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCSSCC-----SSHHHHHHHHHHCCCCCCTTSCHHHH----
T ss_pred ccCCCCCcCCHHHHcC-CCCCchhhhhhhhHHHHHHHhCCCCCCC-----CCHHHHHHHHHcCCCCCCccCCHHHH----
Confidence 368999999999654 6899999999999999999999999974 23444555555555555555555544
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCChH-HHH
Q 007935 546 AKRQVLATFHIALNCTELDPEFRPRMR-TVS 575 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~-ev~ 575 (584)
+++.+||+.||++|||+. |++
T Consensus 232 ---------dli~~~L~~dP~~R~s~~~~l~ 253 (320)
T d1xjda_ 232 ---------DLLVKLFVREPEKRLGVRGDIR 253 (320)
T ss_dssp ---------HHHHHHSCSSGGGSBTTBSCGG
T ss_pred ---------HHHHHhcccCCCCCcCHHHHHH
Confidence 466669999999999995 665
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.3e-35 Score=288.08 Aligned_cols=217 Identities=23% Similarity=0.309 Sum_probs=162.8
Q ss_pred ceeceeecCceEEEEEecCCCC--CCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSG--MGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLI 423 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~--~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV 423 (584)
.+.||+|+||.||+|+....+. ......||||+++........++|.+|+..+.++ +|||||+++|+|.+++..++|
T Consensus 18 ~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~~~~~v 97 (299)
T d1fgka_ 18 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVI 97 (299)
T ss_dssp EEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred eeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccCCeEEEE
Confidence 5689999999999998765431 2333689999998765555568899999999999 899999999999999999999
Q ss_pred eecccCCcHHHHHh-----------------------------------------c--ccccccCCCCccccccCeEEec
Q 007935 424 SDFIRNGSLYAALH-----------------------------------------G--FGLNRLLPGTSKVTKNETIVTS 460 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~-----------------------------------------~--~g~~~~~~~~~~i~~~~~~~~~ 460 (584)
||||++|+|.++|+ + .-|+|++++|+.+..+...+..
T Consensus 98 ~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl~~~~~~kl~ 177 (299)
T d1fgka_ 98 VEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIA 177 (299)
T ss_dssp ECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEEC
T ss_pred EEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccceeecCCCCeEec
Confidence 99999999988774 1 1478888888888777777777
Q ss_pred CCCccc-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHh
Q 007935 461 GTGSRI-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAF 526 (584)
Q Consensus 461 ~~~~~~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~ 526 (584)
+++... ..||+.|||||++.. ..|+.|+|||||||++|||+| |+.||.+.. .........
T Consensus 178 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~-~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~-----~~~~~~~i~ 251 (299)
T d1fgka_ 178 DFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP-----VEELFKLLK 251 (299)
T ss_dssp STTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-----HHHHHHHHH
T ss_pred cchhhccccccccccccccCCCChhhhhhhHhcC-CCCCchhhhHHhHHHHHHhccCCCCCCCCCC-----HHHHHHHHH
Confidence 765321 367889999999655 689999999999999999998 688886422 223332222
Q ss_pred hcC-CCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 527 RER-RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 527 ~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
... .+.+..+++ ++.+++.+||+.||++||||.||++.|++|-
T Consensus 252 ~~~~~~~p~~~~~-------------~l~~li~~cl~~dP~~Rps~~eil~~L~~i~ 295 (299)
T d1fgka_ 252 EGHRMDKPSNCTN-------------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 295 (299)
T ss_dssp TTCCCCCCSSCCH-------------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cCCCCCCCccchH-------------HHHHHHHHHccCCHhHCcCHHHHHHHHHHHh
Confidence 221 222222333 3456888899999999999999999999884
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=7.6e-35 Score=292.40 Aligned_cols=206 Identities=16% Similarity=0.225 Sum_probs=166.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC--CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG--DATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|+...++ +.||||++... ......+.+.+|+++|++++|||||++++++.+.+..++||
T Consensus 46 ~~~lG~G~fg~Vy~a~~~~~g-----~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~ 120 (350)
T d1rdqe_ 46 IKTLGTGSFGRVMLVKHKESG-----NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp EEEEEECSSCEEEEEEETTTC-----CEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred EEEeecCcCcEEEEEEECCCC-----CEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccc
Confidence 367999999999999987765 89999999753 12233477999999999999999999999999999999999
Q ss_pred ecccCCcHHHHH-------------------------hcc--cccccCCCCccccccCeEEecCCCccc--------ccC
Q 007935 425 DFIRNGSLYAAL-------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSRI--------SAI 469 (584)
Q Consensus 425 Ey~~~GsL~~~L-------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~--------~~g 469 (584)
||+.+|+|.+++ |+. -|+|++++|+.+..++.++..|||... ..|
T Consensus 121 e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~~~~~~G 200 (350)
T d1rdqe_ 121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCG 200 (350)
T ss_dssp ECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCCEE
T ss_pred ccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCCCCCEEeeeceeeeecccccccccC
Confidence 999999996554 433 478899999998888888888887542 468
Q ss_pred CCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHHH
Q 007935 470 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQ 549 (584)
Q Consensus 470 t~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 549 (584)
|+.|||||++. +..|+.++|||||||++|||+||+.||.+ .................+..+++++.
T Consensus 201 t~~Y~APE~~~-~~~~~~~~DiwSlGvilyemltG~~Pf~~-----~~~~~~~~~i~~~~~~~p~~~s~~~~-------- 266 (350)
T d1rdqe_ 201 TPEALAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFA-----DQPIQIYEKIVSGKVRFPSHFSSDLK-------- 266 (350)
T ss_dssp CGGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCSSCC-----SSHHHHHHHHHHCCCCCCTTCCHHHH--------
T ss_pred ccccCCHHHHc-CCCCCccccccchhHHHHHHHhCCCCCCC-----cCHHHHHHHHhcCCCCCCccCCHHHH--------
Confidence 99999999955 47899999999999999999999999974 23444555555555445555555554
Q ss_pred HHHHHHHHhcccCCCCCCCC-----ChHHHHH
Q 007935 550 VLATFHIALNCTELDPEFRP-----RMRTVSE 576 (584)
Q Consensus 550 ~~~~~~l~~~Cl~~~P~~RP-----t~~ev~~ 576 (584)
+++.+||+.||.+|+ |++|+++
T Consensus 267 -----~li~~~L~~dP~kR~~~~r~t~~ell~ 293 (350)
T d1rdqe_ 267 -----DLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp -----HHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred -----HHHHHHhhhCHHhccccccccHHHHHc
Confidence 466669999999994 8999874
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.1e-35 Score=289.92 Aligned_cols=208 Identities=15% Similarity=0.198 Sum_probs=162.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||+||+|....++ +.||||.++..... ...+.+|+++|++++|||||++++++.+++..|+||||
T Consensus 10 ~~~lG~G~fg~Vy~~~~~~~~-----~~~AiK~i~~~~~~--~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~ 82 (321)
T d1tkia_ 10 AEDLGRGEFGIVHRCVETSSK-----KTYMAKFVKVKGTD--QVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp EEEEEECSSEEEEEEEETTTT-----EEEEEEEECCCTHH--HHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred EEEEecCCCeEEEEEEECCCC-----cEEEEEEEcCCccc--HHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEec
Confidence 467999999999999998776 89999999875332 36788999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc--------------------------c--cccccCCCCcccccc--CeEEecCCCccc----------
Q 007935 427 IRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKN--ETIVTSGTGSRI---------- 466 (584)
Q Consensus 427 ~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~--~~~~~~~~~~~~---------- 466 (584)
|++|+|.++++. . -|+|++++|+.+..+ ..++..|||...
T Consensus 83 ~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~~~~ 162 (321)
T d1tkia_ 83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRL 162 (321)
T ss_dssp CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEE
T ss_pred CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCCceEEEEcccchhhccccCCcccc
Confidence 999999777643 2 368888888877644 356677776432
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhH
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 546 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 546 (584)
..||+.|+|||... +..|+.++||||+||++|||++|+.||.+. ...+...........++....+.+ .
T Consensus 163 ~~~t~~y~ape~~~-~~~~~~~~DiWSlGvily~ll~G~~Pf~~~-----~~~~~~~~i~~~~~~~~~~~~~~~----s- 231 (321)
T d1tkia_ 163 LFTAPEYYAPEVHQ-HDVVSTATDMWSLGTLVYVLLSGINPFLAE-----TNQQIIENIMNAEYTFDEEAFKEI----S- 231 (321)
T ss_dssp EESCGGGSCHHHHT-TCEECHHHHHHHHHHHHHHHHHSSCTTCCS-----SHHHHHHHHHHTCCCCCHHHHTTS----C-
T ss_pred cccccccccchhcc-CCCCCchhhcccHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHhCCCCCChhhccCC----C-
Confidence 36899999999854 468999999999999999999999999742 234444444444433222111111 1
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 547 KRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 547 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.++.+++.+||+.||++|||+.|+++
T Consensus 232 ----~~~~~li~~~L~~dp~~R~s~~eil~ 257 (321)
T d1tkia_ 232 ----IEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp ----HHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ----HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 23456888899999999999999986
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=1.9e-34 Score=279.88 Aligned_cols=207 Identities=18% Similarity=0.246 Sum_probs=161.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcc--------hhhHhHHHHHHHHHhcC-CCceeeeeEEEEeC
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT--------WRFKDFESEVEAIARVQ-HPNIVRLKAFYYAN 417 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~--------~~~~~f~~Ei~~l~~l~-HpnIV~l~g~~~~~ 417 (584)
.+.||+|+||+||+|+...++ +.||||+++..... ...+.+.+|+.++++++ |||||++++++.++
T Consensus 8 ~~~iG~G~~g~V~~~~~~~~~-----~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 82 (277)
T d1phka_ 8 KEILGRGVSSVVRRCIHKPTC-----KEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN 82 (277)
T ss_dssp EEEEEECSSEEEEEEEETTTT-----EEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred ceEEecCcCeEEEEEEECCCC-----CEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccC
Confidence 568999999999999987765 89999999765211 12346899999999997 99999999999999
Q ss_pred CceeEeeecccCCcHHHHHhc-------------------------c--cccccCCCCccccccCeEEecCCCcc-----
Q 007935 418 DEKLLISDFIRNGSLYAALHG-------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSR----- 465 (584)
Q Consensus 418 ~~~~lV~Ey~~~GsL~~~L~~-------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~----- 465 (584)
+..|+|||||++|+|.++|+. . -|++++++|+.+..++.++..|||.+
T Consensus 83 ~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~ 162 (277)
T d1phka_ 83 TFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP 162 (277)
T ss_dssp SEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred cceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEcCCCCeEEccchheeEccC
Confidence 999999999999999777643 2 47888899988888888888887643
Q ss_pred -----cccCCCcccCcccccc-----CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCc--
Q 007935 466 -----ISAISNVYLAPEARIY-----GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLS-- 533 (584)
Q Consensus 466 -----~~~gt~~y~aPE~~~~-----~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~-- 533 (584)
...||..|+|||++.. ...++.++||||+||++|||+||+.||.+. .................
T Consensus 163 ~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~-----~~~~~~~~i~~~~~~~~~~ 237 (277)
T d1phka_ 163 GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR-----KQMLMLRMIMSGNYQFGSP 237 (277)
T ss_dssp TCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHTCCCCCTT
T ss_pred CCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCC-----CHHHHHHHHHhCCCCCCCc
Confidence 2468999999998642 245789999999999999999999999753 22333333333322211
Q ss_pred --cccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 534 --EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 534 --~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
..+++ ++.+++.+||++||++|||+.||++
T Consensus 238 ~~~~~s~-------------~~~~li~~~L~~~p~~R~s~~eil~ 269 (277)
T d1phka_ 238 EWDDYSD-------------TVKDLVSRFLVVQPQKRYTAEEALA 269 (277)
T ss_dssp TGGGSCH-------------HHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred ccccCCH-------------HHHHHHHHHccCChhHCcCHHHHHc
Confidence 12232 3456788899999999999999875
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.8e-34 Score=281.28 Aligned_cols=222 Identities=18% Similarity=0.205 Sum_probs=159.3
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
+.||+|+||+||+|+....+ +.||||+++... .....+++.+|+++|++++|||||++++++.++++.|+||||
T Consensus 8 ~~lG~G~fg~Vy~~~~~~~~-----~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e~ 82 (298)
T d1gz8a_ 8 EKIGEGTYGVVYKARNKLTG-----EVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 82 (298)
T ss_dssp EEEEECSSSEEEEEEETTTC-----CEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cEEecCcCeEEEEEEECCCC-----CEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEee
Confidence 67999999999999987765 899999997652 223357899999999999999999999999999999999999
Q ss_pred ccCCcH--------------------------HHHHhccc--ccccCCCCccccccCeEEecCCCcc-----------cc
Q 007935 427 IRNGSL--------------------------YAALHGFG--LNRLLPGTSKVTKNETIVTSGTGSR-----------IS 467 (584)
Q Consensus 427 ~~~GsL--------------------------~~~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~ 467 (584)
+.++.+ .+|||+.| |+|++++|+.+..+..++..|||.+ ..
T Consensus 83 ~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~~~~~ 162 (298)
T d1gz8a_ 83 LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 162 (298)
T ss_dssp CSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCTTCC
T ss_pred cCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeecccCcceeccCCcceeccCCcccceee
Confidence 987644 25556554 6889999999888888888888743 23
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcC-CCCc-------------
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER-RPLS------------- 533 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~------------- 533 (584)
.||+.|+|||.+.....++.++||||+||++|||++|+.||.+.... ..+........... ....
T Consensus 163 ~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (298)
T d1gz8a_ 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 241 (298)
T ss_dssp BCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSC
T ss_pred cccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHH-HHHHHHHHhcCCCchhhccccccccccccccc
Confidence 78999999998666556789999999999999999999999753211 11111111110000 0000
Q ss_pred cccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHH
Q 007935 534 EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSES 577 (584)
Q Consensus 534 ~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 577 (584)
........... .....++.+++.+||+.||++|||+.|+++.
T Consensus 242 ~~~~~~~~~~~--~~~s~~~~dll~~mL~~dP~~R~t~~ell~H 283 (298)
T d1gz8a_ 242 KWARQDFSKVV--PPLDEDGRSLLSQMLHYDPNKRISAKAALAH 283 (298)
T ss_dssp CCCCCCHHHHS--TTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccccchhhhc--cCCCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 00000000000 0112456788999999999999999999863
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.1e-34 Score=286.34 Aligned_cols=208 Identities=19% Similarity=0.272 Sum_probs=152.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEe----CCcee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYA----NDEKL 421 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~----~~~~~ 421 (584)
+++||+|+||+||+|+...++ +.||||+++.. +.+.+|++++.++ +|||||++++++.+ ++..|
T Consensus 17 ~~~lG~G~fg~Vy~a~~~~~~-----~~vAiK~i~~~------~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ 85 (335)
T d2ozaa1 17 SQVLGLGINGKVLQIFNKRTQ-----EKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 85 (335)
T ss_dssp EEEEEECSSCEEEEEEETTTC-----CEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred eEEeeeccCeEEEEEEECCCC-----CEEEEEEECCc------HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEE
Confidence 457999999999999987765 89999999652 5678999997765 89999999999876 45689
Q ss_pred EeeecccCCcHHHHHhc---------------------------c--cccccCCCCcccccc---CeEEecCCCcc----
Q 007935 422 LISDFIRNGSLYAALHG---------------------------F--GLNRLLPGTSKVTKN---ETIVTSGTGSR---- 465 (584)
Q Consensus 422 lV~Ey~~~GsL~~~L~~---------------------------~--g~~~~~~~~~~i~~~---~~~~~~~~~~~---- 465 (584)
+|||||++|+|.++|.. . -|+|++++|+.+..+ ..++..+||.+
T Consensus 86 ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~ 165 (335)
T d2ozaa1 86 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 165 (335)
T ss_dssp EEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECC
T ss_pred EEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCccccccccccccccccccccccccccceeeecc
Confidence 99999999999877743 2 368888888877653 45677777643
Q ss_pred ------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChh
Q 007935 466 ------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPA 539 (584)
Q Consensus 466 ------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~ 539 (584)
...||+.|||||++. +..|+.++|||||||++|||+||+.||.+..... ....+..........++. +
T Consensus 166 ~~~~~~~~~gt~~y~aPE~~~-~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~-~~~~~~~~i~~~~~~~~~---~- 239 (335)
T d2ozaa1 166 SHNSLTTPCYTPYYVAPEVLG-PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA-ISPGMKTRIRMGQYEFPN---P- 239 (335)
T ss_dssp CCCCCCCCSCCCSSCCCCCCC-GGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC---------CCCSCSSSCCT---T-
T ss_pred CCCccccccCCcccCCcHHHc-CCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHH-HHHHHHHHHhcCCCCCCC---c-
Confidence 247999999999954 4689999999999999999999999997543221 111111111111111111 1
Q ss_pred hhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 540 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
... ....++.+++.+||+.||++|||+.|+++
T Consensus 240 ~~~-----~~s~~~~~li~~~L~~dP~~R~s~~eil~ 271 (335)
T d2ozaa1 240 EWS-----EVSEEVKMLIRNLLKTEPTQRMTITEFMN 271 (335)
T ss_dssp HHH-----HSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ccc-----cCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 111 11235667888899999999999999986
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.2e-34 Score=277.12 Aligned_cols=201 Identities=19% Similarity=0.255 Sum_probs=155.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcc-----hhhHhHHHHHHHHHhcC--CCceeeeeEEEEeCCc
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-----WRFKDFESEVEAIARVQ--HPNIVRLKAFYYANDE 419 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~-----~~~~~f~~Ei~~l~~l~--HpnIV~l~g~~~~~~~ 419 (584)
.+.||+|+||+||+|+...++ +.||||+++..... ...+++.+|+.+|++++ |||||++++++.+++.
T Consensus 9 ~~~lG~G~fg~Vy~a~~~~~~-----~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~ 83 (273)
T d1xwsa_ 9 GPLLGSGGFGSVYSGIRVSDN-----LPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS 83 (273)
T ss_dssp EEEEEEETTEEEEEEEETTTC-----CEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred eEEEeeCCCeEEEEEEECCCC-----CEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence 467999999999999987765 89999999754211 12245789999999996 8999999999999999
Q ss_pred eeEeeecccC-CcHHHH-------------------------Hhcc--cccccCCCCcccccc-CeEEecCCCcc-----
Q 007935 420 KLLISDFIRN-GSLYAA-------------------------LHGF--GLNRLLPGTSKVTKN-ETIVTSGTGSR----- 465 (584)
Q Consensus 420 ~~lV~Ey~~~-GsL~~~-------------------------L~~~--g~~~~~~~~~~i~~~-~~~~~~~~~~~----- 465 (584)
.++||||+.+ +++.++ ||+. .|+|++++|+.+..+ ..++..|||.+
T Consensus 84 ~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~~ 163 (273)
T d1xwsa_ 84 FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD 163 (273)
T ss_dssp EEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCS
T ss_pred EEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecCCCeEEECccccceeccc
Confidence 9999999986 566444 4443 478899999888754 57778888743
Q ss_pred ----cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhh
Q 007935 466 ----ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALV 541 (584)
Q Consensus 466 ----~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~ 541 (584)
...||+.|||||++.....++.++||||+||++|||+||+.||... . ........++..+++++
T Consensus 164 ~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~-------~----~i~~~~~~~~~~~s~~~- 231 (273)
T d1xwsa_ 164 TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-------E----EIIRGQVFFRQRVSSEC- 231 (273)
T ss_dssp SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH-------H----HHHHCCCCCSSCCCHHH-
T ss_pred ccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCc-------h----HHhhcccCCCCCCCHHH-
Confidence 2468999999999665444567899999999999999999999741 1 12233333444455444
Q ss_pred hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 542 KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 542 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+++.+||+.||++|||++|+++
T Consensus 232 ------------~~li~~~L~~dp~~R~s~~eil~ 254 (273)
T d1xwsa_ 232 ------------QHLIRWCLALRPSDRPTFEEIQN 254 (273)
T ss_dssp ------------HHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ------------HHHHHHHccCCHhHCcCHHHHhc
Confidence 44667799999999999999976
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=2.5e-33 Score=274.74 Aligned_cols=223 Identities=18% Similarity=0.231 Sum_probs=159.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
-+.||+|+||+||+|+...+ +.||||+++... .....+.|.+|+.+|++++|||||++++++.+++..+++||
T Consensus 7 ~~~iG~G~fg~Vy~~~~~~~------~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e 80 (286)
T d1ob3a_ 7 LEKIGEGTYGVVYKAQNNYG------ETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFE 80 (286)
T ss_dssp EEEEEEETTEEEEEEEETTS------CEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred ccEEecCCCcEEEEEEeCCC------CEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEE
Confidence 35799999999999998765 799999997653 23335789999999999999999999999999999999999
Q ss_pred cccCCcHH-------------------------HHHhcc--cccccCCCCccccccCeEEecCCCcc-----------cc
Q 007935 426 FIRNGSLY-------------------------AALHGF--GLNRLLPGTSKVTKNETIVTSGTGSR-----------IS 467 (584)
Q Consensus 426 y~~~GsL~-------------------------~~L~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~ 467 (584)
|+.++.+. +|||+. .|+|++++|+.+..++.++..|+|.+ ..
T Consensus 81 ~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~ 160 (286)
T d1ob3a_ 81 HLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHE 160 (286)
T ss_dssp CCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--------
T ss_pred eehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEcCCCCEEecccccceecccCcccccee
Confidence 99988764 444544 47889999999988888888888743 13
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC-Cccc-----cChhhh
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP-LSEV-----IDPALV 541 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~-~~~~-----~d~~~~ 541 (584)
.|++.|+|||.+.....++.++||||+||++|||++|+.||.+.... ..+............. .... .+....
T Consensus 161 ~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (286)
T d1ob3a_ 161 IVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA-DQLMRIFRILGTPNSKNWPNVTELPKYDPNFT 239 (286)
T ss_dssp -CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCC
T ss_pred cccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHH-HHHHHHHHhhCCCChhhccchhhhhhcccccc
Confidence 58889999999766567899999999999999999999999753211 1111111111000000 0000 000000
Q ss_pred ------hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 542 ------KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 542 ------~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
...........+.+++.+||+.||++|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~ 280 (286)
T d1ob3a_ 240 VYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (286)
T ss_dssp CCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00000001135667889999999999999999974
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.98 E-value=2.1e-32 Score=270.89 Aligned_cols=222 Identities=18% Similarity=0.212 Sum_probs=153.4
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhc---CCCceeeeeEEEEe-----C
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARV---QHPNIVRLKAFYYA-----N 417 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l---~HpnIV~l~g~~~~-----~ 417 (584)
.+.||+|+||+||+|+....++ +.||||+++... .......+.+|+.+|+.+ +|||||+++++|.. .
T Consensus 12 ~~~LG~G~fg~V~~a~~~~~~~----~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~~ 87 (305)
T d1blxa_ 12 VAEIGEGAYGKVFKARDLKNGG----RFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 87 (305)
T ss_dssp EEEEEEETTEEEEEEEETTTTT----EEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSE
T ss_pred EEEEecccCeEEEEEEEECCCC----EEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccccC
Confidence 3579999999999999854321 789999997542 222235678888887766 79999999999864 2
Q ss_pred CceeEeeecccCCcHH--------------------------HHHhccc--ccccCCCCccccccCeEEecCCCcc----
Q 007935 418 DEKLLISDFIRNGSLY--------------------------AALHGFG--LNRLLPGTSKVTKNETIVTSGTGSR---- 465 (584)
Q Consensus 418 ~~~~lV~Ey~~~GsL~--------------------------~~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~---- 465 (584)
...+++|||+++|++. +|||+.| |+|++++|+.+..++..+..+++..
T Consensus 88 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~~~kl~dfg~~~~~~ 167 (305)
T d1blxa_ 88 TKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYS 167 (305)
T ss_dssp EEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCCCC
T ss_pred ceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcCCCCeeecchhhhhhhc
Confidence 4689999999998762 5556554 7899999998888788888777643
Q ss_pred ------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhc-CCCCc-----
Q 007935 466 ------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE-RRPLS----- 533 (584)
Q Consensus 466 ------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~----- 533 (584)
...||+.|||||++.. ..|+.++||||+||++|||+||+.||.+.... ..+.......... .....
T Consensus 168 ~~~~~~~~~gT~~Y~APE~~~~-~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~ 245 (305)
T d1blxa_ 168 FQMALTSVVVTLWYRAPEVLLQ-SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV-DQLGKILDVIGLPGEEDWPRDVAL 245 (305)
T ss_dssp GGGGGCCCCCCCTTCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCGGGSCTTCSS
T ss_pred ccccCCCcccChhhcCcchhcC-CCCChhehhhchHHHHHHHHHCCCCCCCCCHH-HHHHHHHHhhCCCchhcccccccc
Confidence 2478999999999554 78999999999999999999999999753211 1111111111000 00000
Q ss_pred ------cccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 534 ------EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 534 ------~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
........... ......+.+++.+||+.||++|||+.|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~--~~~s~~~~dli~~mL~~dP~~R~sa~e~L~ 292 (305)
T d1blxa_ 246 PRQAFHSKSAQPIEKFV--TDIDELGKDLLLKCLTFNPAKRISAYSALS 292 (305)
T ss_dssp CGGGSCCCCCCCGGGTC--CSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred hhhhhccccccchhhcc--ccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 00000000000 001124567888999999999999999986
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.98 E-value=3.7e-32 Score=270.70 Aligned_cols=223 Identities=14% Similarity=0.136 Sum_probs=157.1
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC-CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEe--------C
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARVQHPNIVRLKAFYYA--------N 417 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~--------~ 417 (584)
.+.||+|+||+||+|+....+ +.||||++... ......+++.+|+++|++++||||+++++++.. +
T Consensus 15 ~~~LG~G~fg~Vy~a~~~~~~-----~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~ 89 (318)
T d3blha1 15 LAKIGQGTFGEVFKARHRKTG-----QKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 89 (318)
T ss_dssp EEEEEECSSSEEEEEEETTTC-----CEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC---------
T ss_pred EEEEecCcCeEEEEEEECCCC-----CEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccC
Confidence 357999999999999987665 89999998665 223345789999999999999999999999865 3
Q ss_pred CceeEeeecccCCcHH-------------------------HHHhcc--cccccCCCCccccccCeEEecCCCccc----
Q 007935 418 DEKLLISDFIRNGSLY-------------------------AALHGF--GLNRLLPGTSKVTKNETIVTSGTGSRI---- 466 (584)
Q Consensus 418 ~~~~lV~Ey~~~GsL~-------------------------~~L~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~---- 466 (584)
+..++||||++++.+. .|||+. .|++++++|+.+..++.++..++|...
T Consensus 90 ~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~~ 169 (318)
T d3blha1 90 GSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSL 169 (318)
T ss_dssp -CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCC
T ss_pred ceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCCCcEEeeecceeeeccc
Confidence 4689999999988763 455554 468899999988888888877776431
Q ss_pred -----------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC-CCc-
Q 007935 467 -----------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR-PLS- 533 (584)
Q Consensus 467 -----------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~- 533 (584)
..||+.|+|||++.....++.|+||||+||++|||+||+.||.+... ......+........ ...
T Consensus 170 ~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~ 247 (318)
T d3blha1 170 AKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTE--QHQLALISQLCGSITPEVWP 247 (318)
T ss_dssp -----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCCCCTTTST
T ss_pred ccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCH--HHHHHHHHHhcCCCChhhcc
Confidence 35899999999966555789999999999999999999999975221 111111222111110 000
Q ss_pred cc--------------cChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 534 EV--------------IDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 534 ~~--------------~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.. ..+..............+.+++.+||+.||++|||++|+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~ 304 (318)
T d3blha1 248 NVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 304 (318)
T ss_dssp TCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHc
Confidence 00 00111111111112235678999999999999999999985
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.97 E-value=2.5e-32 Score=271.45 Aligned_cols=207 Identities=35% Similarity=0.588 Sum_probs=172.4
Q ss_pred CCchHHHHHHHHHHHhcccCCCCCCCCCCCCCCCCC--cceeeEecC----CCEEEEEcCCCCCcc--cCCccccCCCCC
Q 007935 20 FSLNQDGLALLALKAAIAQDPTRALDSWSESDSTPC--HWSGIHCIR----NRVTSLYLPNRNLTG--YMPSELGLLNSL 91 (584)
Q Consensus 20 ~~~~~~~~~l~~~~~~~~~~~~~~l~~w~~~~~~~c--~w~gv~c~~----~~v~~l~l~~~~l~~--~~~~~~~~l~~L 91 (584)
.|.++|.+||++||+++. +| ..+++|..+ .+|| .|.||+|+. .+|+.|+|++|+++| .+|+.|++|++|
T Consensus 2 ~c~~~e~~aLl~~k~~~~-~~-~~l~sW~~~-~d~C~~~w~gv~C~~~~~~~~v~~L~L~~~~l~g~~~lp~~l~~L~~L 78 (313)
T d1ogqa_ 2 LCNPQDKQALLQIKKDLG-NP-TTLSSWLPT-TDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYL 78 (313)
T ss_dssp CSCHHHHHHHHHHHHHTT-CC-GGGTTCCTT-SCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTC
T ss_pred CCCHHHHHHHHHHHHHCC-CC-CcCCCCCCC-CCCCCCcCCCeEEeCCCCcEEEEEEECCCCCCCCCCCCChHHhcCccc
Confidence 477899999999999996 44 368999754 4667 599999985 379999999999998 479999999999
Q ss_pred CEEEccC-CCCCCCCcccccCCCCCCEEecCCCcccCCC------------------------CcccCCCCCCCeeeccc
Q 007935 92 TRLSLAS-NNFSKPIPANLFNATNLVYLDLAHNSFCGPI------------------------PDRIKTLKNLTHLDLSS 146 (584)
Q Consensus 92 ~~L~l~~-n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~------------------------p~~~~~l~~L~~L~ls~ 146 (584)
++|+|++ |+|+|.+|.+|+++++|++|+|++|+|.+.. |..+.+++.|+.+++++
T Consensus 79 ~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~ 158 (313)
T d1ogqa_ 79 NFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDG 158 (313)
T ss_dssp SEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCS
T ss_pred cccccccccccccccccccccccccchhhhccccccccccccccchhhhcccccccccccccCchhhccCcccceeeccc
Confidence 9999997 8999999999999999999999988876544 44555666666666666
Q ss_pred CCCCCCchHHhh--------------------------------------------------------------------
Q 007935 147 NLLNGSLPEFLL-------------------------------------------------------------------- 158 (584)
Q Consensus 147 N~l~~~~p~~~~-------------------------------------------------------------------- 158 (584)
|.++|.+|..+.
T Consensus 159 n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~~l~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~ 238 (313)
T d1ogqa_ 159 NRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG 238 (313)
T ss_dssp SCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGG
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 666655554332
Q ss_pred ---ccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCCCCCCCCCCCCC
Q 007935 159 ---DLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGLCGFPLQSPC 231 (584)
Q Consensus 159 ---~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~l~~~~~~~~C 231 (584)
.++.|+ .|+|++|+|+|.+|+.|+++++|++|+|++|+|+|.+|..+.+.++..+.+.+|+.+||.|++ +|
T Consensus 239 ~~~~~~~L~-~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~~~L~~L~~l~l~~N~~l~g~plp-~c 312 (313)
T d1ogqa_ 239 KVGLSKNLN-GLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLP-AC 312 (313)
T ss_dssp GCCCCTTCC-EEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTTSS-CC
T ss_pred ccccccccc-cccCccCeecccCChHHhCCCCCCEEECcCCcccccCCCcccCCCCCHHHhCCCccccCCCCC-CC
Confidence 223444 889999999999999999999999999999999999999888999999999999999998876 55
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=6.2e-32 Score=272.16 Aligned_cols=218 Identities=21% Similarity=0.295 Sum_probs=151.0
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCC------ce
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYAND------EK 420 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~------~~ 420 (584)
+.||+|+||+||+|.....+ +.||||+++... .....+.+.+|+++|++++|||||+++++|...+ +.
T Consensus 24 ~~lG~G~fg~V~~~~~~~~~-----~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~~ 98 (346)
T d1cm8a_ 24 QPVGSGAYGAVCSAVDGRTG-----AKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDF 98 (346)
T ss_dssp EEC------CEEEEEETTTC-----CEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCC
T ss_pred EEEecCCCeEEEEEEECCCC-----CEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccceE
Confidence 57999999999999987765 899999998652 3334578999999999999999999999998755 47
Q ss_pred eEeeecccCCcHH------------------------HHHhccc--ccccCCCCccccccCeEEecCCCcc--------c
Q 007935 421 LLISDFIRNGSLY------------------------AALHGFG--LNRLLPGTSKVTKNETIVTSGTGSR--------I 466 (584)
Q Consensus 421 ~lV~Ey~~~GsL~------------------------~~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~--------~ 466 (584)
++||||+ +++|. .|||+.| |+|++++|+.+..+..++..++|.+ .
T Consensus 99 ~lv~e~~-~~~l~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~~~~~ 177 (346)
T d1cm8a_ 99 YLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTG 177 (346)
T ss_dssp EEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSSCCS
T ss_pred EEEEecc-cccHHHHHHhccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhcccccccccccccceeccCCcccc
Confidence 9999999 45663 4455544 7889999998888888888888753 2
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC---------------
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP--------------- 531 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~--------------- 531 (584)
..||+.|+|||++.....++.++||||+||++|||++|+.||.+.... ..+...... . ...+
T Consensus 178 ~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~-~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~ 254 (346)
T d1cm8a_ 178 YVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHL-DQLKEIMKV-T-GTPPAEFVQRLQSDEAKNY 254 (346)
T ss_dssp SCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHH-H-CCCCHHHHHTCSCHHHHHH
T ss_pred ccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChH-HHHHHHHhc-c-CCCcHHHHhhhcchhhhhh
Confidence 478999999999766567899999999999999999999999753211 011111110 0 0000
Q ss_pred ---CccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 532 ---LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 532 ---~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+.+.....+.... ......+.+|+.+||+.||++|||+.|+++
T Consensus 255 ~~~~~~~~~~~~~~~~--~~~s~~~~dli~~mL~~dP~~R~ta~eiL~ 300 (346)
T d1cm8a_ 255 MKGLPELEKKDFASIL--TNASPLAVNLLEKMLVLDAEQRVTAGEALA 300 (346)
T ss_dssp HHHSCCCCCCCGGGTC--TTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred hccCCcccccchHHhc--cCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 0000000000000 000124567888899999999999999986
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.2e-31 Score=270.04 Aligned_cols=223 Identities=21% Similarity=0.322 Sum_probs=154.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCC------ce
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAND------EK 420 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~------~~ 420 (584)
.++||+|+||+||+|+....+ +.||||+++... +.+.+|+++|++++|||||+++++|.... ..
T Consensus 25 ~k~LG~G~fg~Vy~a~~~~~~-----~~vAiK~i~~~~-----~~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~ 94 (350)
T d1q5ka_ 25 TKVIGNGSFGVVYQAKLCDSG-----ELVAIKKVLQDK-----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 94 (350)
T ss_dssp EEEEEEETTEEEEEEEETTTC-----CEEEEEEEECCS-----SSCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEE
T ss_pred eeEEeeCcCeEEEEEEECCCC-----CEEEEEEECccc-----hHHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEE
Confidence 368999999999999998765 899999997642 23358999999999999999999996532 36
Q ss_pred eEeeecccCCcH----------------------------HHHHhccc--ccccCCCCccccccC-eEEecCCCccc---
Q 007935 421 LLISDFIRNGSL----------------------------YAALHGFG--LNRLLPGTSKVTKNE-TIVTSGTGSRI--- 466 (584)
Q Consensus 421 ~lV~Ey~~~GsL----------------------------~~~L~~~g--~~~~~~~~~~i~~~~-~~~~~~~~~~~--- 466 (584)
++|||||++|.+ .+|||+.| |+|++++|+.+..++ .++..|||...
T Consensus 95 ~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~ 174 (350)
T d1q5ka_ 95 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 174 (350)
T ss_dssp EEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTTCCEEECCCTTCEECC
T ss_pred EEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCCCceeEecccchhhcc
Confidence 899999987643 24455544 688999998887664 66677887432
Q ss_pred -------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH-----------Hhhc
Q 007935 467 -------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRK-----------AFRE 528 (584)
Q Consensus 467 -------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~-----------~~~~ 528 (584)
..||..|+|||.+.....++.++||||+||++|||++|+.||...... ..+..+.+. ....
T Consensus 175 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~-~~l~~i~~~~g~~~~~~~~~~~~~ 253 (350)
T d1q5ka_ 175 RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGTPTREQIREMNPN 253 (350)
T ss_dssp TTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHH-HHHHHHHHHHCCCCHHHHHHHCC-
T ss_pred CCcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHH-HHHHHHHHHhCCChHHhhhhhccc
Confidence 368999999998665567999999999999999999999999753211 111111110 0000
Q ss_pred --CCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH--HHHhh
Q 007935 529 --RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE--SLDRV 581 (584)
Q Consensus 529 --~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~--~L~~i 581 (584)
...+........... .......++.+|+.+||+.||++|||+.|+++ .++++
T Consensus 254 ~~~~~~~~~~~~~~~~~-~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~ 309 (350)
T d1q5ka_ 254 YTEFKFPQIKAHPWTKV-FRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309 (350)
T ss_dssp --CCCCCCCCCCCGGGT-SCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred hhhccccccccCchhhh-cccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccc
Confidence 000000000000000 00011224567888999999999999999985 34544
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.2e-31 Score=266.23 Aligned_cols=214 Identities=19% Similarity=0.274 Sum_probs=163.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC---cchhhHhHHHHHHHHHhcCC-CceeeeeEEEEeCCceeE
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD---ATWRFKDFESEVEAIARVQH-PNIVRLKAFYYANDEKLL 422 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~---~~~~~~~f~~Ei~~l~~l~H-pnIV~l~g~~~~~~~~~l 422 (584)
.+.||+|+||+||+|+...+.. .++.||||.++... .....+.+.+|++++++++| ||||++++++.+.+..++
T Consensus 29 ~~~IG~G~fg~Vy~~~~~~~~~--~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~~~~ 106 (322)
T d1vzoa_ 29 LKVLGTGAYGKVFLVRKISGHD--TGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHL 106 (322)
T ss_dssp EEEEEETTTEEEEEEEECSSTT--TTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEE
T ss_pred EEEEecCCCeEEEEEEECccCC--CCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCceee
Confidence 4689999999999998744311 11799999987541 22234678999999999966 899999999999999999
Q ss_pred eeecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCccc---------
Q 007935 423 ISDFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI--------- 466 (584)
Q Consensus 423 V~Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~--------- 466 (584)
||||+.+|+|.+++. +. -|+++++.|+.+..++.++..+||...
T Consensus 107 v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~~~~~~~ 186 (322)
T d1vzoa_ 107 ILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETER 186 (322)
T ss_dssp EECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGG
T ss_pred eeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecCCCCEEEeeccchhhhccccccc
Confidence 999999999976664 22 478888888888888888888887432
Q ss_pred ---ccCCCcccCccccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhh
Q 007935 467 ---SAISNVYLAPEARIYG-SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVK 542 (584)
Q Consensus 467 ---~~gt~~y~aPE~~~~~-~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~ 542 (584)
..|++.|+|||.+... ..++.++||||+||+||||+||+.||.+... ........+.......+++..+++++.
T Consensus 187 ~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~-~~~~~~i~~~~~~~~~~~~~~~s~~~~- 264 (322)
T d1vzoa_ 187 AYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGE-KNSQAEISRRILKSEPPYPQEMSALAK- 264 (322)
T ss_dssp GCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTS-CCCHHHHHHHHHHCCCCCCTTSCHHHH-
T ss_pred ccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHhcccCCCCCcccCCHHHH-
Confidence 3689999999986543 2478899999999999999999999986533 234455555555555555555555544
Q ss_pred hhhHHHHHHHHHHHHhcccCCCCCCCCC-----hHHHHH
Q 007935 543 EIHAKRQVLATFHIALNCTELDPEFRPR-----MRTVSE 576 (584)
Q Consensus 543 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt-----~~ev~~ 576 (584)
+++.+||++||++||| ++|+++
T Consensus 265 ------------~li~~~l~~dP~~R~s~~~~t~~eil~ 291 (322)
T d1vzoa_ 265 ------------DLIQRLLMKDPKKRLGCGPRDADEIKE 291 (322)
T ss_dssp ------------HHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred ------------HHHHHHcccCHHHcCCCCcccHHHHHc
Confidence 4666699999999994 788864
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=2.7e-31 Score=268.11 Aligned_cols=222 Identities=18% Similarity=0.246 Sum_probs=154.4
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC------Cce
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN------DEK 420 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~------~~~ 420 (584)
+.||+|+||+||+|+...++ +.||||++.... .....+++.+|+.++++++|||||++++++... +..
T Consensus 23 ~~LG~G~fg~V~~~~d~~t~-----~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~~ 97 (355)
T d2b1pa1 23 KPIGSGAQGIVCAAYDAVLD-----RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDV 97 (355)
T ss_dssp EECSCC--CEEEEEEETTTT-----EEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEE
T ss_pred EEeecCcCeEEEEEEECCCC-----CEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCcee
Confidence 58999999999999988765 899999998653 333446799999999999999999999999643 578
Q ss_pred eEeeecccCCcH----------------------HHHHhccc--ccccCCCCccccccCeEEecCCCcc----------c
Q 007935 421 LLISDFIRNGSL----------------------YAALHGFG--LNRLLPGTSKVTKNETIVTSGTGSR----------I 466 (584)
Q Consensus 421 ~lV~Ey~~~GsL----------------------~~~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~----------~ 466 (584)
|+|||||.+|.+ .+|||+.| |+|+++.|+.+..+...+..+++.. .
T Consensus 98 ~iv~Ey~~~~l~~~~~~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~~~~~~~ 177 (355)
T d2b1pa1 98 YLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP 177 (355)
T ss_dssp EEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC------------
T ss_pred EEEEeccchHHHHhhhcCCCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccccccceeeechhhhhcccccccccc
Confidence 999999987655 25556554 6888889988887777777666532 2
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHH------------------HHhhc
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVR------------------KAFRE 528 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~------------------~~~~~ 528 (584)
..||+.|+|||++. +..+++++||||+||++|||++|+.||.+.... ........ .....
T Consensus 178 ~~~t~~y~aPE~l~-~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (355)
T d2b1pa1 178 YVVTRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI-DQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 255 (355)
T ss_dssp ---CCTTCCHHHHT-TCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHTTSCHHHHHHHHT
T ss_pred ccccccccChhhhc-CCCCCCCcccccccchHHHHhhCCCCCCCCCHH-HHHHHHHHhccCCCHHHHHHhhhhHHHHhhc
Confidence 46899999999954 478999999999999999999999999753211 00111111 00111
Q ss_pred CCCCcc-----ccChhhhh--hhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 529 RRPLSE-----VIDPALVK--EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 529 ~~~~~~-----~~d~~~~~--~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
...... ........ ..........+.+++.+|++.||++|||++|+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~ 310 (355)
T d2b1pa1 256 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 310 (355)
T ss_dssp SCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 110000 00000000 0011233456788999999999999999999984
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=2.3e-31 Score=261.73 Aligned_cols=220 Identities=16% Similarity=0.196 Sum_probs=160.4
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
+.||+|+||+||+|+...++ +.||||+++... .....+++.+|+.+|++++|||||+++++|.+.+..++|+||
T Consensus 8 ~~LG~G~fg~V~~~~~~~~~-----~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~~ 82 (292)
T d1unla_ 8 EKIGEGTYGTVFKAKNRETH-----EIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_dssp EEEEECSSSEEEEEEETTTC-----CEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred eEEecCcCeEEEEEEECCCC-----cEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEeee
Confidence 57999999999999988766 899999997653 333457899999999999999999999999999999999999
Q ss_pred ccCCcHH-------------------------HHHhccc--ccccCCCCccccccCeEEecCCCccc-----------cc
Q 007935 427 IRNGSLY-------------------------AALHGFG--LNRLLPGTSKVTKNETIVTSGTGSRI-----------SA 468 (584)
Q Consensus 427 ~~~GsL~-------------------------~~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~-----------~~ 468 (584)
+.+++|. +|||+.| |+|++++|+.+..+...+..++|... ..
T Consensus 83 ~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~~~~~~ 162 (292)
T d1unla_ 83 CDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEV 162 (292)
T ss_dssp CSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSCCCSCC
T ss_pred ccccccccccccccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccccCCceeeeecchhhcccCCCccceeec
Confidence 9999884 4445444 68899999988888888888887442 24
Q ss_pred CCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCC-ccccC----------
Q 007935 469 ISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPL-SEVID---------- 537 (584)
Q Consensus 469 gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~d---------- 537 (584)
++..|+|||++.....++.++||||+||++|||++|+.||.... +..+............ .....
T Consensus 163 ~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (292)
T d1unla_ 163 VTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN----DVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP 238 (292)
T ss_dssp SCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCS----SHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCC
T ss_pred cccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCC----CHHHHHHHHHhhcCCCChhhhhhhhhcccccc
Confidence 67789999986665567999999999999999999999976422 2222222221110000 00000
Q ss_pred ----hhhhhh-hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 538 ----PALVKE-IHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 538 ----~~~~~~-~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+..... .........+.+++.+|++.||++|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~ 282 (292)
T d1unla_ 239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 000000 000011134567888999999999999999975
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.97 E-value=5e-31 Score=259.96 Aligned_cols=213 Identities=15% Similarity=0.123 Sum_probs=149.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeee-eEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRL-KAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l-~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|+...++ +.||||.+...... +++.+|++++++++|+|+|.. .++..+.+..++|||
T Consensus 12 ~~~iG~G~fG~Vy~a~~~~~~-----~~vAvK~~~~~~~~---~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme 83 (299)
T d1ckia_ 12 GRKIGSGSFGDIYLGTDIAAG-----EEVAIKLECVKTKH---PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 83 (299)
T ss_dssp EEEEEECSSSEEEEEEETTTT-----EEEEEEEEESCTTS---CCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred eEEEeeCCCcEEEEEEECCCC-----CEEEEEEEchhccC---HHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEE
Confidence 467999999999999987765 89999998764322 578999999999987765555 455567778899999
Q ss_pred cccCCcHH--------------------------HHHhcc--cccccCCCCccccc---cCeEEecCCCcc---------
Q 007935 426 FIRNGSLY--------------------------AALHGF--GLNRLLPGTSKVTK---NETIVTSGTGSR--------- 465 (584)
Q Consensus 426 y~~~GsL~--------------------------~~L~~~--g~~~~~~~~~~i~~---~~~~~~~~~~~~--------- 465 (584)
|+.+ +|. +|||.. -|+|++++|+.+.. +..++..|||.+
T Consensus 84 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~ 162 (299)
T d1ckia_ 84 LLGP-SLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 162 (299)
T ss_dssp CCCC-BHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTC
T ss_pred EcCC-chhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceeccccccc
Confidence 9954 553 445544 47889999886543 234666676632
Q ss_pred ---------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHH--HHHHHHhhcCCCCcc
Q 007935 466 ---------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLE--SLVRKAFRERRPLSE 534 (584)
Q Consensus 466 ---------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~--~~~~~~~~~~~~~~~ 534 (584)
...||+.|||||++. +..++.++|||||||++|||+||+.||........... ........ .+ .+
T Consensus 163 ~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~--~~-~~ 238 (299)
T d1ckia_ 163 QHIPYRENKNLTGTARYASINTHL-GIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMS--TP-IE 238 (299)
T ss_dssp CBCCCCBCCSCCCCSSSCCHHHHT-TBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHH--SC-HH
T ss_pred cceeccccCCcCCCccccCHHHHh-CCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCC--CC-hh
Confidence 236899999999954 46899999999999999999999999976443221111 11111111 11 01
Q ss_pred ccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhh
Q 007935 535 VIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581 (584)
Q Consensus 535 ~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 581 (584)
...+. ...++.+++..||+.+|++||+++++.+.|+.+
T Consensus 239 ~~~~~---------~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~ 276 (299)
T d1ckia_ 239 VLCKG---------YPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 276 (299)
T ss_dssp HHTTT---------SCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHH
T ss_pred HhccC---------CCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence 00011 112456678889999999999999999888875
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=99.97 E-value=5.3e-31 Score=263.37 Aligned_cols=216 Identities=14% Similarity=0.186 Sum_probs=156.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcC-CCceeeeeEEEEeC--CceeEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-HPNIVRLKAFYYAN--DEKLLI 423 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~-HpnIV~l~g~~~~~--~~~~lV 423 (584)
.+.||+|+||+||+|+...++ +.||||+++... .+++.+|+++|++++ |||||++++++... ...++|
T Consensus 40 ~~~LG~G~fg~V~~a~~~~~~-----~~vAiK~i~~~~----~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v 110 (328)
T d3bqca1 40 VRKLGRGKYSEVFEAINITNN-----EKVVVKILKPVK----KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 110 (328)
T ss_dssp EEEEEECSSEEEEEEEETTTT-----EEEEEEEECSSC----HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEE
T ss_pred EEEEecCcCeEEEEEEECCCC-----CEEEEEEECHHH----HHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEE
Confidence 468999999999999987765 899999997532 267899999999995 99999999999854 468999
Q ss_pred eecccCCcH----------------------HHHHhccc--ccccCCCCccccccC-eEEecCCCccc----------cc
Q 007935 424 SDFIRNGSL----------------------YAALHGFG--LNRLLPGTSKVTKNE-TIVTSGTGSRI----------SA 468 (584)
Q Consensus 424 ~Ey~~~GsL----------------------~~~L~~~g--~~~~~~~~~~i~~~~-~~~~~~~~~~~----------~~ 468 (584)
||||++|+| .+|||+.| |+|++++|+.+..++ .++..|||.+. ..
T Consensus 111 ~e~~~~~~L~~~~~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~~~~~~~ 190 (328)
T d3bqca1 111 FEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 190 (328)
T ss_dssp EECCCSCBGGGTTTSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTCCCCSCC
T ss_pred EeecCCCcHHHHhcCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCCCeeeecccccceeccCCCcccccc
Confidence 999999998 36667655 688999998887654 56777776432 36
Q ss_pred CCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHH--------h-hcCCC----C---
Q 007935 469 ISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKA--------F-RERRP----L--- 532 (584)
Q Consensus 469 gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~--------~-~~~~~----~--- 532 (584)
||+.|+|||.+.....++.++||||+||++|||++|+.||................. . ..... .
T Consensus 191 ~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 270 (328)
T d3bqca1 191 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI 270 (328)
T ss_dssp SCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGT
T ss_pred cCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcccchh
Confidence 789999999976656689999999999999999999999975332211111111000 0 00000 0
Q ss_pred ---------ccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 533 ---------SEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 533 ---------~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.......... ....++.+++.+||+.||++|||++|+++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~-----~~s~~~~dli~~mL~~dP~~R~ta~e~L~ 318 (328)
T d3bqca1 271 LGRHSRKRWERFVHSENQH-----LVSPEALDFLDKLLRYDHQSRLTAREAME 318 (328)
T ss_dssp CCCCCCCCGGGGCCTTTGG-----GCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccccccchhhcccccccc-----cCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0000000001 11235678899999999999999999985
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=7.3e-31 Score=263.82 Aligned_cols=221 Identities=15% Similarity=0.189 Sum_probs=154.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCC----ceeE
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAND----EKLL 422 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~----~~~l 422 (584)
.+.||+|+||+||+|+...++ +.||||+++........+.+.+|+++|++++|||||++++++.... ..++
T Consensus 13 ~~~LG~G~fg~Vy~~~~~~~~-----~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~ 87 (345)
T d1pmea_ 13 LSYIGEGAYGMVCSAYDNVNK-----VRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY 87 (345)
T ss_dssp EEECC---CCCEEEEEETTTC-----SEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred EEEEeeccCeEEEEEEECCCC-----cEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEE
Confidence 367999999999999987665 8999999986554455578999999999999999999999997654 2355
Q ss_pred eeecccCCcHHHHH------------------------hcc--cccccCCCCccccccCeEEecCCCcc-----------
Q 007935 423 ISDFIRNGSLYAAL------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSR----------- 465 (584)
Q Consensus 423 V~Ey~~~GsL~~~L------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~----------- 465 (584)
++||+.+|+|.+++ |+. -|+|++++|+.+..++.++..++|..
T Consensus 88 l~~~~~~g~L~~~l~~~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~~~~ 167 (345)
T d1pmea_ 88 LVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG 167 (345)
T ss_dssp EEEECCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCC
T ss_pred EEEeecCCchhhhhhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCCCCEEEcccCceeeccCCCccce
Confidence 56677899997665 333 47899999998888888888887632
Q ss_pred ---cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC-----------
Q 007935 466 ---ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP----------- 531 (584)
Q Consensus 466 ---~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~----------- 531 (584)
...||+.|+|||++..+..++.++||||+||++|||++|+.||...... ...............
T Consensus 168 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (345)
T d1pmea_ 168 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL--DQLNHILGILGSPSQEDLNCIINLKA 245 (345)
T ss_dssp TTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCSCCHHHHHTCCCHHH
T ss_pred eeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHH--HHHHHHhhhccCCChhhhhhhhhhhh
Confidence 2358899999999766667899999999999999999999999753211 111111110000000
Q ss_pred ------CccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 532 ------LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 532 ------~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.............. ....++.+++.+||+.||++|||+.|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~--~~s~~~~~li~~~L~~dP~~R~ta~e~L~ 294 (345)
T d1pmea_ 246 RNYLLSLPHKNKVPWNRLFP--NADSKALDLLDKMLTFNPHKRIEVEQALA 294 (345)
T ss_dssp HHHHHTSCCCCCCCHHHHCT--TSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred hcccccCCccCCCCHHHhCC--CCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00000000000000 00124677899999999999999999986
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.97 E-value=2.7e-30 Score=253.42 Aligned_cols=213 Identities=14% Similarity=0.175 Sum_probs=157.1
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCC-CceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQH-PNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~H-pnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||+||+|+...++ +.||||.+...... +.+.+|+++++.++| +|++.+++++.++...++|||
T Consensus 10 ~~~iG~G~fG~Vy~a~~~~~~-----~~vAvK~~~~~~~~---~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme 81 (293)
T d1csna_ 10 GRRIGEGSFGVIFEGTNLLNN-----QQVAIKFEPRRSDA---PQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 81 (293)
T ss_dssp EEEEEECSSCEEEEEEETTTT-----EEEEEEEEECCTTS---CCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred EEEEecCCCeEEEEEEECCCC-----CEEEEEEEccccCc---HHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEE
Confidence 467999999999999987765 89999998664322 568899999999965 999999999999999999999
Q ss_pred cccCCcHHHHH--------------------------hcc--cccccCCCCccccc-----cCeEEecCCCccc------
Q 007935 426 FIRNGSLYAAL--------------------------HGF--GLNRLLPGTSKVTK-----NETIVTSGTGSRI------ 466 (584)
Q Consensus 426 y~~~GsL~~~L--------------------------~~~--g~~~~~~~~~~i~~-----~~~~~~~~~~~~~------ 466 (584)
|+ +|+|.+++ |.. -|+|++++|+.+.. +..++..|||.+.
T Consensus 82 ~~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~ 160 (293)
T d1csna_ 82 LL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPV 160 (293)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTT
T ss_pred ec-CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEEcccCc
Confidence 99 67886554 333 47889998887753 3456777776431
Q ss_pred ------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhc--CCCC
Q 007935 467 ------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE--RRPL 532 (584)
Q Consensus 467 ------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~--~~~~ 532 (584)
..||+.|||||++. +..++.++|||||||++|||+||+.||.+..... ........... ..+
T Consensus 161 ~~~~~~~~~~~~~~GT~~y~aPE~~~-~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~--~~~~~~~i~~~~~~~~- 236 (293)
T d1csna_ 161 TKQHIPYREKKNLSGTARYMSINTHL-GREQSRRDDLEALGHVFMYFLRGSLPWQGLKAAT--NKQKYERIGEKKQSTP- 236 (293)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCC--HHHHHHHHHHHHHHSC-
T ss_pred cccceeecccCceEEchhhcCHHHhc-CCCCChHHHHHHhhHHHHHHHhCCCcCCCccchh--HHHHHHHHHhccCCCC-
Confidence 35899999999955 4789999999999999999999999997543322 11111111111 111
Q ss_pred ccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhh
Q 007935 533 SEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581 (584)
Q Consensus 533 ~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 581 (584)
.+.+.+.+ ..++.+++..|++.+|++||+++.+.+.|+++
T Consensus 237 ~~~l~~~~---------p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~ 276 (293)
T d1csna_ 237 LRELCAGF---------PEEFYKYMHYARNLAFDATPDYDYLQGLFSKV 276 (293)
T ss_dssp HHHHTTTS---------CHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred hHHhcCCC---------CHHHHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence 11111111 12455677789999999999999998888775
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=4.2e-30 Score=259.12 Aligned_cols=221 Identities=17% Similarity=0.177 Sum_probs=155.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC-----Cce
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN-----DEK 420 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~-----~~~ 420 (584)
.+.||+|+||+||+|+....+ +.||||+++... .....+++.+|+++|++++|||||++++++... ...
T Consensus 23 ~~~LG~G~fg~Vy~a~~~~~~-----~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~ 97 (348)
T d2gfsa1 23 LSPVGSGAYGSVCAAFDTKTG-----LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 97 (348)
T ss_dssp EEECGGGTTSSEEEEEETTTT-----EEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCCC
T ss_pred EEEEecCCCeEEEEEEECCCC-----CEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCce
Confidence 357999999999999987665 899999998652 333446789999999999999999999999743 345
Q ss_pred eEeeecccCCcHHHHHh------------------------cc--cccccCCCCccccccCeEEecCCCcc--------c
Q 007935 421 LLISDFIRNGSLYAALH------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR--------I 466 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~~L~------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~--------~ 466 (584)
++|+||+.+|+|.++++ +. -|+|++++|+.+..++..+..+++.. .
T Consensus 98 ~~i~~~~~gg~L~~~~~~~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~~~~~ 177 (348)
T d2gfsa1 98 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 177 (348)
T ss_dssp CEEEEECCSEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCC----CCTGGGSS
T ss_pred EEEEEeecCCchhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccccccccchhcccCccccc
Confidence 77788889999976653 33 47889999988888888888777643 2
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC-CCcccc---------
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR-PLSEVI--------- 536 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~--------- 536 (584)
..||..|+|||.......++.++||||+||++|||++|+.||.+.+. ......+........ ......
T Consensus 178 ~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 255 (348)
T d2gfsa1 178 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH--IDQLKLILRLVGTPGAELLKKISSESARNYI 255 (348)
T ss_dssp SCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCCCCHHHHTTCCCHHHHHHH
T ss_pred ccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCH--HHHHHHHHHhcCCCChHHhhhccchhhhhhh
Confidence 36788899999866655678999999999999999999999975321 111111111111000 000000
Q ss_pred -------ChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 537 -------DPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 537 -------d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
...+.... ......+.+++.+||+.||++|||+.|+++
T Consensus 256 ~~~~~~~~~~~~~~~--~~~s~~~~dli~~mL~~dP~~R~ta~elL~ 300 (348)
T d2gfsa1 256 QSLTQMPKMNFANVF--IGANPLAVDLLEKMLVLDSDKRITAAQALA 300 (348)
T ss_dssp TTSCCCCCCCHHHHS--TTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhcccCCCcchhhhc--CCCCHHHHHHHHHHCcCChhhCcCHHHHhc
Confidence 00000000 001234667889999999999999999986
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.93 E-value=7.4e-26 Score=229.12 Aligned_cols=222 Identities=16% Similarity=0.172 Sum_probs=148.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcC-----------CCceeeeeEEEE
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-----------HPNIVRLKAFYY 415 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~-----------HpnIV~l~g~~~ 415 (584)
.+.||+|+||+||+|+...++ +.||||+++.... ..+.+.+|++++++++ |+|||++++++.
T Consensus 18 ~~~LG~G~fg~Vy~~~~~~~g-----~~vAvKvi~~~~~--~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~ 90 (362)
T d1q8ya_ 18 VRKLGWGHFSTVWLAKDMVNN-----THVAMKIVRGDKV--YTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 90 (362)
T ss_dssp EEEEEECSSEEEEEEEETTTT-----EEEEEEEECSCHH--HHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred EEEEeeCCCeEEEEEEECCCC-----CEEEEEEEecccc--chHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEee
Confidence 468999999999999987665 8999999986422 2367889999998885 578999999986
Q ss_pred eC--CceeEeeecccCCcH----------------------------HHHHhc---ccccccCCCCccccccC------e
Q 007935 416 AN--DEKLLISDFIRNGSL----------------------------YAALHG---FGLNRLLPGTSKVTKNE------T 456 (584)
Q Consensus 416 ~~--~~~~lV~Ey~~~GsL----------------------------~~~L~~---~g~~~~~~~~~~i~~~~------~ 456 (584)
.. ...+++|+++..+.. .++||. ..|+|++++|+.+..++ .
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~ 170 (362)
T d1q8ya_ 91 HKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQ 170 (362)
T ss_dssp EEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEE
T ss_pred eccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCcccccce
Confidence 53 456677777655542 245664 35788999998776543 2
Q ss_pred EEecCCCcc--------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCC--cHHHHHHH--
Q 007935 457 IVTSGTGSR--------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGK--GLESLVRK-- 524 (584)
Q Consensus 457 ~~~~~~~~~--------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~--~l~~~~~~-- 524 (584)
+...++|.+ ...||+.|+|||++.. ..++.++||||+||+++||++|+.||........ ....+...
T Consensus 171 ~kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~ 249 (362)
T d1q8ya_ 171 IKIADLGNACWYDEHYTNSIQTREYRSPEVLLG-APWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIE 249 (362)
T ss_dssp EEECCCTTCEETTBCCCSCCSCGGGCCHHHHHT-CCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHH
T ss_pred eeEeecccccccccccccccccccccChhhccc-cCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHH
Confidence 555666543 2468999999998654 6899999999999999999999999975432211 11111110
Q ss_pred Hhhc-----------------CC----CCccccChhhhhhh-----hHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 525 AFRE-----------------RR----PLSEVIDPALVKEI-----HAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 525 ~~~~-----------------~~----~~~~~~d~~~~~~~-----~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.... .. .+...-........ ........+.+++.+|++.||.+|||++|+++
T Consensus 250 ~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~ 327 (362)
T d1q8ya_ 250 LLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN 327 (362)
T ss_dssp HHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred HhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0000 00 00000000000000 11234567889999999999999999999986
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.79 E-value=6.1e-20 Score=167.37 Aligned_cols=130 Identities=25% Similarity=0.350 Sum_probs=103.7
Q ss_pred EEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCC-cccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCC
Q 007935 70 LYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPI-PANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNL 148 (584)
Q Consensus 70 l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~ 148 (584)
++.++++|+ .+|..+. +++++|+|++|+|++.+ +..|.++++|+.|+|++|++.+..+..|..+++|+.|+|++|+
T Consensus 13 v~Cs~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~ 89 (192)
T d1w8aa_ 13 VDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENK 89 (192)
T ss_dssp EECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCC
T ss_pred EEEeCCCcC-ccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeecccc
Confidence 444556666 5566553 57888889988887644 4556788888889998888888888888888888899999888
Q ss_pred CCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCC
Q 007935 149 LNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIP 203 (584)
Q Consensus 149 l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 203 (584)
|++..|..|.++++|+ .|+|++|+|++..|+.|..+++|++|+|++|.+....+
T Consensus 90 l~~l~~~~F~~l~~L~-~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~~~ 143 (192)
T d1w8aa_ 90 IKEISNKMFLGLHQLK-TLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCEECSSSSTTCTTCC-EEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred ccccCHHHHhCCCccc-ccccCCccccccCHHHhcCCcccccccccccccccccc
Confidence 8866677788888888 88899898888788888888888889888888876543
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.78 E-value=6.3e-19 Score=169.44 Aligned_cols=158 Identities=26% Similarity=0.219 Sum_probs=119.4
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
..++.|+|++|+|++..+..|.++++|++|+|++|+|+. +| .+..+++|++|+|++|++++ .+..+..+++|+.|++
T Consensus 31 ~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~l 107 (266)
T d1p9ag_ 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQ-VDGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDV 107 (266)
T ss_dssp TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EE-CCSCCTTCCEEECCSSCCSS-CCCCTTTCTTCCEEEC
T ss_pred cCCCEEECcCCcCCCcCHHHhhccccccccccccccccc-cc-cccccccccccccccccccc-cccccccccccccccc
Confidence 358889999999987777788888889999998888874 44 35677888888888888763 4555555555555555
Q ss_pred cc------------------------CCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCcc
Q 007935 145 SS------------------------NLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSG 200 (584)
Q Consensus 145 s~------------------------N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 200 (584)
++ |.++...+..+..++.++ .+++++|+|++..++.|..+++|++|+|++|+|+.
T Consensus 108 ~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~-~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~~ 186 (266)
T d1p9ag_ 108 SFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLE-KLSLANNNLTELPAGLLNGLENLDTLLLQENSLYT 186 (266)
T ss_dssp CSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC-EEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred cccccceeeccccccccccccccccccccceeccccccccccch-hcccccccccccCccccccccccceeecccCCCcc
Confidence 55 445434445566677888 89999999998888888999999999999999995
Q ss_pred CCCCCCCccccCCcccCCCCCCCCCC
Q 007935 201 EIPQVGSLLNQGPTAFSGNPGLCGFP 226 (584)
Q Consensus 201 ~~p~~~~~~~~~~~~~~~n~~l~~~~ 226 (584)
.++.+..+.++..+.+.|||+.|++.
T Consensus 187 lp~~~~~~~~L~~L~L~~Np~~CdC~ 212 (266)
T d1p9ag_ 187 IPKGFFGSHLLPFAFLHGNPWLCNCE 212 (266)
T ss_dssp CCTTTTTTCCCSEEECCSCCBCCSGG
T ss_pred cChhHCCCCCCCEEEecCCCCCCCcc
Confidence 54556667777788889999888753
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.76 E-value=2.9e-19 Score=162.75 Aligned_cols=171 Identities=20% Similarity=0.226 Sum_probs=140.3
Q ss_pred CCCCcceeeEecC-----------CCEEEEEcCCCCCcccC-CccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEe
Q 007935 52 STPCHWSGIHCIR-----------NRVTSLYLPNRNLTGYM-PSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLD 119 (584)
Q Consensus 52 ~~~c~w~gv~c~~-----------~~v~~l~l~~~~l~~~~-~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 119 (584)
.|-|.|..|.|+. ..++.|+|++|+|++.+ +..|..+++|++|+|++|++.+..+..+..+++|++|+
T Consensus 5 ~C~C~~~~v~Cs~~~L~~iP~~lp~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~ 84 (192)
T d1w8aa_ 5 MCHCEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQ 84 (192)
T ss_dssp TSEEETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEE
T ss_pred CCEEcCCEEEEeCCCcCccCCCCCCCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceee
Confidence 4668899999973 36899999999998755 67789999999999999999998899999999999999
Q ss_pred cCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCc
Q 007935 120 LAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLS 199 (584)
Q Consensus 120 l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 199 (584)
|++|+|++..|..|.++++|++|+|++|+|++..|.+|..+++|+ .|+|++|++....... .-...++.+.+..|.++
T Consensus 85 Ls~N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~-~l~L~~N~~~~~~~~~-~~~~~l~~~~l~~~~~~ 162 (192)
T d1w8aa_ 85 LGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLT-SLNLASNPFNCNCHLA-WFAEWLRKKSLNGGAAR 162 (192)
T ss_dssp CCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCC-EEECTTCCBCCSGGGH-HHHHHHHHHCCSGGGCB
T ss_pred eccccccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccc-cccccccccccccchH-HHhhhhhhhcccCCCeE
Confidence 999999988888999999999999999999977788899999999 9999999998543221 11234667778888888
Q ss_pred cCCCCCCCccccCCcccCCCCCCCCCC
Q 007935 200 GEIPQVGSLLNQGPTAFSGNPGLCGFP 226 (584)
Q Consensus 200 ~~~p~~~~~~~~~~~~~~~n~~l~~~~ 226 (584)
...| ..+....-..++.|...|..+
T Consensus 163 c~~p--~~l~~~~l~~L~~n~l~C~~~ 187 (192)
T d1w8aa_ 163 CGAP--SKVRDVQIKDLPHSEFKCSSE 187 (192)
T ss_dssp BCSS--TTTTTSBGGGSCTTTCCCCCC
T ss_pred eCCC--hhhcCCEeeecCHhhCcCCCC
Confidence 7666 344455555666676556544
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.70 E-value=2.4e-18 Score=169.57 Aligned_cols=137 Identities=34% Similarity=0.551 Sum_probs=114.7
Q ss_pred CCEEEEEcCC-CCCcccCCccccCCCCCCEEEccCCCCCCC------------------------CcccccCCCCCCEEe
Q 007935 65 NRVTSLYLPN-RNLTGYMPSELGLLNSLTRLSLASNNFSKP------------------------IPANLFNATNLVYLD 119 (584)
Q Consensus 65 ~~v~~l~l~~-~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~------------------------~p~~~~~l~~L~~L~ 119 (584)
..++.|+|++ |+++|.+|+.|++|++|++|+|++|+|.+. +|..+.++++|+.++
T Consensus 76 ~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~~L~~l~ 155 (313)
T d1ogqa_ 76 PYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGIT 155 (313)
T ss_dssp TTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEE
T ss_pred ccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcccccccccccccCchhhccCcccceee
Confidence 5788999986 899999999999999999999998887754 344566677788888
Q ss_pred cCCCcccCCCCcccC-----------------------------------------------------------------
Q 007935 120 LAHNSFCGPIPDRIK----------------------------------------------------------------- 134 (584)
Q Consensus 120 l~~N~l~~~~p~~~~----------------------------------------------------------------- 134 (584)
+++|.++|.+|..+.
T Consensus 156 l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~~l~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~ 235 (313)
T d1ogqa_ 156 FDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAF 235 (313)
T ss_dssp CCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECC
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 888877776665432
Q ss_pred ------CCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCC-CccC-CC
Q 007935 135 ------TLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNN-LSGE-IP 203 (584)
Q Consensus 135 ------~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~-~p 203 (584)
.+++|+.|+|++|+|+|.+|.+|+++++|+ .|+|++|+|+|.+|+ ++++++|+.+++++|+ +.|. +|
T Consensus 236 ~~~~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~-~L~Ls~N~l~g~iP~-~~~L~~L~~l~l~~N~~l~g~plp 310 (313)
T d1ogqa_ 236 DLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLH-SLNVSFNNLCGEIPQ-GGNLQRFDVSAYANNKCLCGSPLP 310 (313)
T ss_dssp BGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCC-EEECCSSEEEEECCC-STTGGGSCGGGTCSSSEEESTTSS
T ss_pred cccccccccccccccCccCeecccCChHHhCCCCCC-EEECcCCcccccCCC-cccCCCCCHHHhCCCccccCCCCC
Confidence 233788999999999999999999999999 999999999999995 6889999999999997 6665 44
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.68 E-value=1.3e-16 Score=156.42 Aligned_cols=167 Identities=25% Similarity=0.307 Sum_probs=121.7
Q ss_pred CCCCcceeeEecC-----------CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEec
Q 007935 52 STPCHWSGIHCIR-----------NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDL 120 (584)
Q Consensus 52 ~~~c~w~gv~c~~-----------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 120 (584)
.|-|.|.+|.|.. ..++.|+|++|+|+...+..|.++++|++|++++|.+....|..|.++++|++|++
T Consensus 7 ~c~c~~~~~~C~~~~L~~lP~~l~~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l 86 (305)
T d1xkua_ 7 RCQCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 86 (305)
T ss_dssp TCEEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCEecCCEEEecCCCCCccCCCCCCCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecc
Confidence 4568999999974 45889999999999776778999999999999999999877888999999999999
Q ss_pred CCCcccCCCCccc------------------------------------------------CCCC---------------
Q 007935 121 AHNSFCGPIPDRI------------------------------------------------KTLK--------------- 137 (584)
Q Consensus 121 ~~N~l~~~~p~~~------------------------------------------------~~l~--------------- 137 (584)
++|+++. +|..+ ..++
T Consensus 87 ~~n~l~~-l~~~~~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~~l 165 (305)
T d1xkua_ 87 SKNQLKE-LPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTI 165 (305)
T ss_dssp CSSCCSB-CCSSCCTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSC
T ss_pred cCCccCc-CccchhhhhhhhhccccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCcccc
Confidence 9998873 33221 1122
Q ss_pred ------CCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCcccc
Q 007935 138 ------NLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQ 211 (584)
Q Consensus 138 ------~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~ 211 (584)
+|+.|++++|.+++..+..+.+++.++ .|++++|++++..+..|.++++|++|+|++|.|+..++.+..+.++
T Consensus 166 ~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~-~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~~lp~~l~~l~~L 244 (305)
T d1xkua_ 166 PQGLPPSLTELHLDGNKITKVDAASLKGLNNLA-KLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYI 244 (305)
T ss_dssp CSSCCTTCSEEECTTSCCCEECTGGGTTCTTCC-EEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCCTTTTTCSSC
T ss_pred CcccCCccCEEECCCCcCCCCChhHhhcccccc-ccccccccccccccccccccccceeeecccccccccccccccccCC
Confidence 345555555555555555666666666 7777777777666667777777777777777776554445556666
Q ss_pred CCcccCCCC
Q 007935 212 GPTAFSGNP 220 (584)
Q Consensus 212 ~~~~~~~n~ 220 (584)
..+.+++|.
T Consensus 245 ~~L~Ls~N~ 253 (305)
T d1xkua_ 245 QVVYLHNNN 253 (305)
T ss_dssp CEEECCSSC
T ss_pred CEEECCCCc
Confidence 666666664
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.65 E-value=1.6e-16 Score=153.88 Aligned_cols=152 Identities=25% Similarity=0.284 Sum_probs=129.1
Q ss_pred CCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCc
Q 007935 74 NRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSL 153 (584)
Q Consensus 74 ~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~ 153 (584)
.+.++...+..|.++++|++|++++|.+....+..+..+++|+.+++++|+|++..+..|..+++|+.|+|++|+|++..
T Consensus 90 ~~~~~~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~ 169 (284)
T d1ozna_ 90 NAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVP 169 (284)
T ss_dssp CTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred ccccccccchhhcccccCCEEecCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccc
Confidence 34444445677888999999999999998777777888899999999999999777778889999999999999999777
Q ss_pred hHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCC-CCCccccCCcccCCCCCCCCCC
Q 007935 154 PEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ-VGSLLNQGPTAFSGNPGLCGFP 226 (584)
Q Consensus 154 p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~~~~~~~~~~~n~~l~~~~ 226 (584)
|..|.++++|+ .+++++|++++..|..|.++++|++|++++|.+++.+|. +..+.++..+.+++|+..|.++
T Consensus 170 ~~~f~~l~~L~-~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~C~C~ 242 (284)
T d1ozna_ 170 ERAFRGLHSLD-RLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCR 242 (284)
T ss_dssp TTTTTTCTTCC-EEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGG
T ss_pred hhhhccccccc-hhhhhhccccccChhHhhhhhhcccccccccccccccccccccccccCEEEecCCCCCCCcc
Confidence 88889999999 999999999988899999999999999999999987763 4456667788889999877653
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.61 E-value=5.4e-16 Score=150.17 Aligned_cols=138 Identities=24% Similarity=0.207 Sum_probs=128.8
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|+|++|++....+..+..+++|+.+++++|+|++..+..|..+++|+.|+|++|+|++..+..|.++++|+.+++
T Consensus 105 ~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l 184 (284)
T d1ozna_ 105 GRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLL 184 (284)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred ccCCEEecCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchhhhccccccchhhh
Confidence 47999999999999888888999999999999999999866777889999999999999999888889999999999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIP 203 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 203 (584)
++|++++..|..|.++++|+ .|++++|++++..|..|+++++|+.|+|++|.+.+..+
T Consensus 185 ~~N~l~~i~~~~f~~l~~L~-~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~C~C~ 242 (284)
T d1ozna_ 185 HQNRVAHVHPHAFRDLGRLM-TLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCR 242 (284)
T ss_dssp CSSCCCEECTTTTTTCTTCC-EEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGG
T ss_pred hhccccccChhHhhhhhhcc-cccccccccccccccccccccccCEEEecCCCCCCCcc
Confidence 99999988899999999999 99999999999889999999999999999999987544
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.60 E-value=2.6e-15 Score=143.68 Aligned_cols=132 Identities=23% Similarity=0.173 Sum_probs=96.0
Q ss_pred CEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecc
Q 007935 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLS 145 (584)
Q Consensus 66 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls 145 (584)
.++.|+|++|++++ .+..+..+++|+.|++++|.+.+..+..+..+.+|+.|++++|.++...+..+..+++|+.|+++
T Consensus 78 ~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~ 156 (266)
T d1p9ag_ 78 VLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLA 156 (266)
T ss_dssp TCCEEECCSSCCSS-CCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred cccccccccccccc-cccccccccccccccccccccceeeccccccccccccccccccccceeccccccccccchhcccc
Confidence 34444444444442 23344445555555555555544444444555666666666666665555667788999999999
Q ss_pred cCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCcc
Q 007935 146 SNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSG 200 (584)
Q Consensus 146 ~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 200 (584)
+|+|++..+..|..+++|+ .|+|++|+|+ .+|+.+..+++|+.|+|++|.+.-
T Consensus 157 ~N~l~~~~~~~~~~l~~L~-~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~~C 209 (266)
T d1p9ag_ 157 NNNLTELPAGLLNGLENLD-TLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (266)
T ss_dssp TSCCSCCCTTTTTTCTTCC-EEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred cccccccCccccccccccc-eeecccCCCc-ccChhHCCCCCCCEEEecCCCCCC
Confidence 9999988888899999999 9999999999 889889999999999999998864
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.58 E-value=2.4e-15 Score=125.48 Aligned_cols=101 Identities=28% Similarity=0.315 Sum_probs=55.3
Q ss_pred EEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCC
Q 007935 69 SLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNL 148 (584)
Q Consensus 69 ~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~ 148 (584)
.|+|++|+|+ .++ .++.+++|++|++++|.|+ .+|..+..+++|+.|++++|+|++ +| .+..+++|+.|++++|+
T Consensus 2 ~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~-l~-~~~~l~~L~~L~l~~N~ 76 (124)
T d1dcea3 2 VLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNR 76 (124)
T ss_dssp EEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSC
T ss_pred EEEcCCCCCC-CCc-ccccCCCCCEEECCCCccC-cchhhhhhhhcccccccccccccc-cC-ccccccccCeEECCCCc
Confidence 4566666665 333 2555666666666666665 355555566666666666666653 33 35556666666666666
Q ss_pred CCCCc-hHHhhccccCccEEEeccccCc
Q 007935 149 LNGSL-PEFLLDLRALTGTLNLSFNQFS 175 (584)
Q Consensus 149 l~~~~-p~~~~~l~~L~~~l~l~~N~l~ 175 (584)
|+... ...+..+++|+ .|++++|+++
T Consensus 77 i~~~~~~~~l~~~~~L~-~L~l~~N~i~ 103 (124)
T d1dcea3 77 LQQSAAIQPLVSCPRLV-LLNLQGNSLC 103 (124)
T ss_dssp CCSSSTTGGGGGCTTCC-EEECTTSGGG
T ss_pred cCCCCCchhhcCCCCCC-EEECCCCcCC
Confidence 55221 13455555555 5555555554
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.58 E-value=3e-15 Score=124.90 Aligned_cols=104 Identities=27% Similarity=0.335 Sum_probs=92.7
Q ss_pred CEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEecc
Q 007935 92 TRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSF 171 (584)
Q Consensus 92 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~ 171 (584)
++|+|++|+|+. +| .+..+++|++|+|++|+|+ .+|+.|+.+++|+.|++++|+|+ .+| .+.++++|+ .|++++
T Consensus 1 R~L~Ls~n~l~~-l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~-~l~-~~~~l~~L~-~L~l~~ 74 (124)
T d1dcea3 1 RVLHLAHKDLTV-LC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-NVD-GVANLPRLQ-ELLLCN 74 (124)
T ss_dssp SEEECTTSCCSS-CC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCG-GGTTCSSCC-EEECCS
T ss_pred CEEEcCCCCCCC-Cc-ccccCCCCCEEECCCCccC-cchhhhhhhhccccccccccccc-ccC-ccccccccC-eEECCC
Confidence 589999999984 55 5899999999999999998 68888999999999999999999 566 489999999 999999
Q ss_pred ccCcccc-CccccCCCCCcEEEeecCCCccC
Q 007935 172 NQFSGQI-PEMYGHFPVMVSLDLRNNNLSGE 201 (584)
Q Consensus 172 N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~ 201 (584)
|+|+... ...+..+++|+.|++++|.++..
T Consensus 75 N~i~~~~~~~~l~~~~~L~~L~l~~N~i~~~ 105 (124)
T d1dcea3 75 NRLQQSAAIQPLVSCPRLVLLNLQGNSLCQE 105 (124)
T ss_dssp SCCCSSSTTGGGGGCTTCCEEECTTSGGGGS
T ss_pred CccCCCCCchhhcCCCCCCEEECCCCcCCcC
Confidence 9998543 35789999999999999999864
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.55 E-value=2.9e-15 Score=131.38 Aligned_cols=121 Identities=22% Similarity=0.225 Sum_probs=70.3
Q ss_pred CEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecc
Q 007935 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLS 145 (584)
Q Consensus 66 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls 145 (584)
++++|+|++|+|+. ++..+..+++|++|+|++|.|+. ++ .|..+++|++|+|++|+++...+..+..+++|+.|+|+
T Consensus 19 ~lr~L~L~~n~I~~-i~~~~~~l~~L~~L~Ls~N~i~~-l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~L~L~ 95 (162)
T d1a9na_ 19 RDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRK-LD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILT 95 (162)
T ss_dssp SCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCE-EC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECC
T ss_pred cCcEEECCCCCCCc-cCccccccccCCEEECCCCCCCc-cC-CcccCcchhhhhcccccccCCCccccccccccccceec
Confidence 45666666666663 34445556666666666666653 33 45666666666666666664333344556666666666
Q ss_pred cCCCCCCch--HHhhccccCccEEEeccccCccccCc----cccCCCCCcEEE
Q 007935 146 SNLLNGSLP--EFLLDLRALTGTLNLSFNQFSGQIPE----MYGHFPVMVSLD 192 (584)
Q Consensus 146 ~N~l~~~~p--~~~~~l~~L~~~l~l~~N~l~~~~p~----~~~~l~~L~~L~ 192 (584)
+|+++ .++ ..+..+++|+ .|++++|+++ ..|. .+..+++|+.||
T Consensus 96 ~N~i~-~~~~l~~l~~l~~L~-~L~l~~N~i~-~~~~~r~~~i~~lp~L~~LD 145 (162)
T d1a9na_ 96 NNSLV-ELGDLDPLASLKSLT-YLCILRNPVT-NKKHYRLYVIYKVPQVRVLD 145 (162)
T ss_dssp SCCCC-CGGGGGGGGGCTTCC-EEECCSSGGG-GSTTHHHHHHHHCTTCSEET
T ss_pred ccccc-ccccccccccccccc-hhhcCCCccc-cccchHHHHHHHCCCcCeeC
Confidence 66665 333 2455666666 6666666665 2232 355566666655
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.51 E-value=3.7e-14 Score=129.16 Aligned_cols=143 Identities=25% Similarity=0.332 Sum_probs=75.5
Q ss_pred CEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecc
Q 007935 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLS 145 (584)
Q Consensus 66 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls 145 (584)
+++.|++++|+++. + +.+..+++|++|+|++|+|++. + .+.++++|++|++++|.+.. ++ .+.++++|+.|+++
T Consensus 41 ~l~~L~l~~~~i~~-l-~~l~~l~nL~~L~Ls~N~l~~~-~-~l~~l~~L~~L~l~~n~~~~-~~-~l~~l~~L~~L~l~ 114 (199)
T d2omxa2 41 QVTTLQADRLGIKS-I-DGVEYLNNLTQINFSNNQLTDI-T-PLKNLTKLVDILMNNNQIAD-IT-PLANLTNLTGLTLF 114 (199)
T ss_dssp TCCEEECTTSCCCC-C-TTGGGCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEECC
T ss_pred CCCEEECCCCCCCC-c-cccccCCCcCcCccccccccCc-c-cccCCccccccccccccccc-cc-cccccccccccccc
Confidence 45566666666553 2 2355566666666666666542 2 15566666666666665542 22 25555666666666
Q ss_pred cCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCC
Q 007935 146 SNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 146 ~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
+|.+... + .+..+++|+ .|++++|++.. ++ .+..+++|+.|++++|++++. +.+..+.++..+.+++|.
T Consensus 115 ~~~~~~~-~-~~~~l~~L~-~L~l~~n~l~~-~~-~l~~~~~L~~L~l~~n~l~~l-~~l~~l~~L~~L~ls~N~ 183 (199)
T d2omxa2 115 NNQITDI-D-PLKNLTNLN-RLELSSNTISD-IS-ALSGLTSLQQLNFSSNQVTDL-KPLANLTTLERLDISSNK 183 (199)
T ss_dssp SSCCCCC-G-GGTTCTTCS-EEECCSSCCCC-CG-GGTTCTTCSEEECCSSCCCCC-GGGTTCTTCCEEECCSSC
T ss_pred ccccccc-c-ccchhhhhH-Hhhhhhhhhcc-cc-cccccccccccccccccccCC-ccccCCCCCCEEECCCCC
Confidence 5555432 1 245555555 56666665542 22 355555566666666655543 223444445555555553
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.51 E-value=5.4e-14 Score=137.28 Aligned_cols=156 Identities=23% Similarity=0.263 Sum_probs=117.0
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCccccc----------------------------------
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF---------------------------------- 110 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~---------------------------------- 110 (584)
.+++.|++++|.+....|..|..+++|++|++++|+|+. +|..+.
T Consensus 55 ~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n~l~~-l~~~~~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~ 133 (305)
T d1xkua_ 55 KNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKE-LPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGT 133 (305)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSB-CCSSCCTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCS
T ss_pred ccccccccccccccccchhhhhCCCccCEecccCCccCc-Cccchhhhhhhhhccccchhhhhhhhhhcccccccccccc
Confidence 357777777777776666677777777777777776653 222110
Q ss_pred --------------C---------------------CCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchH
Q 007935 111 --------------N---------------------ATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPE 155 (584)
Q Consensus 111 --------------~---------------------l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~ 155 (584)
. +++|+.|++++|.+++..+..|.+++.++.|++++|.+++..|.
T Consensus 134 n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~~l~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~ 213 (305)
T d1xkua_ 134 NPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNG 213 (305)
T ss_dssp SCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSCCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTT
T ss_pred ccccccCCCccccccccccCccccccCCccccCcccCCccCEEECCCCcCCCCChhHhhccccccccccccccccccccc
Confidence 1 34566777777777767777888999999999999999988888
Q ss_pred HhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCC-------CccccCCcccCCCCCCC
Q 007935 156 FLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVG-------SLLNQGPTAFSGNPGLC 223 (584)
Q Consensus 156 ~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~-------~~~~~~~~~~~~n~~l~ 223 (584)
++.++++|+ .|+|++|+|+ .+|+.|.++++|+.|+|++|+|+....... ...++..+.+.+|+..+
T Consensus 214 ~~~~l~~L~-~L~L~~N~L~-~lp~~l~~l~~L~~L~Ls~N~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~~~~ 286 (305)
T d1xkua_ 214 SLANTPHLR-ELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQY 286 (305)
T ss_dssp TGGGSTTCC-EEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCG
T ss_pred cccccccce-eeeccccccc-ccccccccccCCCEEECCCCccCccChhhccCcchhcccCCCCEEECCCCcCcc
Confidence 999999999 9999999999 678899999999999999999996433211 12335556677887543
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.51 E-value=6.6e-14 Score=127.48 Aligned_cols=133 Identities=32% Similarity=0.440 Sum_probs=112.9
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|+|++|++++..| ++.+++|++|++++|.+.. ++ .+.++++|+.|++++|.+... ..+..+++|+.|++
T Consensus 62 ~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~~~~-~~-~l~~l~~L~~L~l~~~~~~~~--~~~~~l~~L~~L~l 135 (199)
T d2omxa2 62 NNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIAD-IT-PLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLEL 135 (199)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEECCSSCCCCC--GGGTTCTTCSEEEC
T ss_pred CCcCcCccccccccCccc--ccCCccccccccccccccc-cc-ccccccccccccccccccccc--cccchhhhhHHhhh
Confidence 579999999999997543 9999999999999999975 55 488999999999999999753 35889999999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCcc
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLL 209 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~ 209 (584)
++|++. .+| .+..+++|+ .|++++|++++. + .++++++|+.|++++|+++. +|.+..+.
T Consensus 136 ~~n~l~-~~~-~l~~~~~L~-~L~l~~n~l~~l-~-~l~~l~~L~~L~ls~N~i~~-i~~l~~L~ 194 (199)
T d2omxa2 136 SSNTIS-DIS-ALSGLTSLQ-QLNFSSNQVTDL-K-PLANLTTLERLDISSNKVSD-ISVLAKLT 194 (199)
T ss_dssp CSSCCC-CCG-GGTTCTTCS-EEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCC-CGGGGGCT
T ss_pred hhhhhc-ccc-ccccccccc-ccccccccccCC-c-cccCCCCCCEEECCCCCCCC-CccccCCC
Confidence 999998 455 588999999 999999999964 3 48899999999999999986 34333333
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.49 E-value=5.6e-14 Score=129.09 Aligned_cols=123 Identities=30% Similarity=0.356 Sum_probs=55.9
Q ss_pred CEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecc
Q 007935 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLS 145 (584)
Q Consensus 66 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls 145 (584)
+++.|+|++|++++. + .++.+++|+.|++++|+|++ +| .+..+++|+.|++++|.+.. + ..+..+++|+.++++
T Consensus 69 ~L~~L~L~~n~i~~l-~-~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~l~~~~~~~-~-~~l~~l~~l~~l~~~ 142 (210)
T d1h6ta2 69 NVTKLFLNGNKLTDI-K-PLANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLG 142 (210)
T ss_dssp TCCEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECC
T ss_pred CCCEEeCCCccccCc-c-ccccCccccccccccccccc-cc-cccccccccccccccccccc-c-ccccccccccccccc
Confidence 344445544444432 1 23444445555554444442 23 34444445555554444431 1 224444445555555
Q ss_pred cCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCc
Q 007935 146 SNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLS 199 (584)
Q Consensus 146 ~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 199 (584)
+|.+++ +..+..+++|+ .+++++|++++. + .+.++++|+.|+|++|+++
T Consensus 143 ~n~l~~--~~~~~~l~~L~-~l~l~~n~l~~i-~-~l~~l~~L~~L~Ls~N~i~ 191 (210)
T d1h6ta2 143 NNKITD--ITVLSRLTKLD-TLSLEDNQISDI-V-PLAGLTKLQNLYLSKNHIS 191 (210)
T ss_dssp SSCCCC--CGGGGGCTTCS-EEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCC
T ss_pred cccccc--ccccccccccc-cccccccccccc-c-cccCCCCCCEEECCCCCCC
Confidence 554442 12244445555 555555555432 2 1445555555555555554
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.49 E-value=2.5e-14 Score=125.35 Aligned_cols=114 Identities=15% Similarity=0.109 Sum_probs=97.9
Q ss_pred ccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhcccc
Q 007935 83 SELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRA 162 (584)
Q Consensus 83 ~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~ 162 (584)
+.+.+...|++|+|++|+|+. +|..+..+++|++|+|++|+|+ .++ .|..+++|++|+|++|+++...+..+..+++
T Consensus 12 ~~~~n~~~lr~L~L~~n~I~~-i~~~~~~l~~L~~L~Ls~N~i~-~l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~ 88 (162)
T d1a9na_ 12 AQYTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIR-KLD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPD 88 (162)
T ss_dssp CEEECTTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCC-EEC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred HhccCcCcCcEEECCCCCCCc-cCccccccccCCEEECCCCCCC-ccC-CcccCcchhhhhcccccccCCCccccccccc
Confidence 346788899999999999985 6776788999999999999998 454 5899999999999999999555556678999
Q ss_pred CccEEEeccccCccccC--ccccCCCCCcEEEeecCCCccC
Q 007935 163 LTGTLNLSFNQFSGQIP--EMYGHFPVMVSLDLRNNNLSGE 201 (584)
Q Consensus 163 L~~~l~l~~N~l~~~~p--~~~~~l~~L~~L~l~~N~l~~~ 201 (584)
|+ .|++++|+|+. ++ ..+..+++|++|++++|.++..
T Consensus 89 L~-~L~L~~N~i~~-~~~l~~l~~l~~L~~L~l~~N~i~~~ 127 (162)
T d1a9na_ 89 LT-ELILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVTNK 127 (162)
T ss_dssp CC-EEECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGGGS
T ss_pred cc-cceeccccccc-cccccccccccccchhhcCCCccccc
Confidence 99 99999999984 33 4688999999999999998754
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.48 E-value=1.4e-13 Score=126.28 Aligned_cols=144 Identities=24% Similarity=0.323 Sum_probs=122.5
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
..++.|++++|+++... .+..+++|++|+|++|.|++ ++ .+..+++|++|++++|++++ +| .+..+++|+.|++
T Consensus 46 ~~L~~L~l~~~~i~~l~--~l~~l~~L~~L~L~~n~i~~-l~-~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~l 119 (210)
T d1h6ta2 46 NSIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLTD-IK-PLANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSL 119 (210)
T ss_dssp HTCCEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEEC
T ss_pred cCccEEECcCCCCCCch--hHhhCCCCCEEeCCCccccC-cc-ccccCccccccccccccccc-cc-ccccccccccccc
Confidence 36899999999998643 38899999999999999997 44 47899999999999999984 55 5899999999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
++|.+. .++ .+..++.++ .+++++|.+++ +..+..+++|+.+++++|++++. +.+..+.++..+.+++|.
T Consensus 120 ~~~~~~-~~~-~l~~l~~l~-~l~~~~n~l~~--~~~~~~l~~L~~l~l~~n~l~~i-~~l~~l~~L~~L~Ls~N~ 189 (210)
T d1h6ta2 120 EHNGIS-DIN-GLVHLPQLE-SLYLGNNKITD--ITVLSRLTKLDTLSLEDNQISDI-VPLAGLTKLQNLYLSKNH 189 (210)
T ss_dssp TTSCCC-CCG-GGGGCTTCC-EEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCCC-GGGTTCTTCCEEECCSSC
T ss_pred cccccc-ccc-ccccccccc-ccccccccccc--ccccccccccccccccccccccc-ccccCCCCCCEEECCCCC
Confidence 999997 444 588899999 99999999985 34577899999999999999974 446677788888888885
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=99.39 E-value=6.8e-13 Score=133.55 Aligned_cols=145 Identities=27% Similarity=0.315 Sum_probs=98.3
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCC--------------
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIP-------------- 130 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-------------- 130 (584)
.+++.|++++|+++.. +.+..+++|+.|++++|.+++.. .+..+++|+.|++++|++++..+
T Consensus 219 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~--~~~~~~~L~~L~l~~~~l~~~~~~~~~~~l~~l~~~~ 294 (384)
T d2omza2 219 TNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLA--PLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 294 (384)
T ss_dssp TTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCG--GGTTCTTCSEEECCSSCCCCCGGGTTCTTCSEEECCS
T ss_pred CCCCEEECCCCCCCCc--chhhcccccchhccccCccCCCC--cccccccCCEeeccCcccCCCCccccccccccccccc
Confidence 4678888888888742 46788888888888888888643 37778888888888888775322
Q ss_pred ------cccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCC
Q 007935 131 ------DRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ 204 (584)
Q Consensus 131 ------~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 204 (584)
..+..+.+++.|+|++|++++..| +..+++|+ .|++++|+|++ ++ .+.++++|++|+|++|+|++.+|
T Consensus 295 n~l~~~~~~~~~~~l~~L~ls~n~l~~l~~--l~~l~~L~-~L~L~~n~l~~-l~-~l~~l~~L~~L~l~~N~l~~l~~- 368 (384)
T d2omza2 295 NQLEDISPISNLKNLTYLTLYFNNISDISP--VSSLTKLQ-RLFFANNKVSD-VS-SLANLTNINWLSAGHNQISDLTP- 368 (384)
T ss_dssp SCCSCCGGGGGCTTCSEEECCSSCCSCCGG--GGGCTTCC-EEECCSSCCCC-CG-GGGGCTTCCEEECCSSCCCBCGG-
T ss_pred cccccccccchhcccCeEECCCCCCCCCcc--cccCCCCC-EEECCCCCCCC-Ch-hHcCCCCCCEEECCCCcCCCChh-
Confidence 124455667777777777764322 66677777 77777777763 33 46777777777777777776554
Q ss_pred CCCccccCCcccCCC
Q 007935 205 VGSLLNQGPTAFSGN 219 (584)
Q Consensus 205 ~~~~~~~~~~~~~~n 219 (584)
+..+.++..+.+++|
T Consensus 369 l~~l~~L~~L~L~~N 383 (384)
T d2omza2 369 LANLTRITQLGLNDQ 383 (384)
T ss_dssp GTTCTTCSEEECCCE
T ss_pred hccCCCCCEeeCCCC
Confidence 444555555555544
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.36 E-value=6.2e-13 Score=115.46 Aligned_cols=99 Identities=22% Similarity=0.145 Sum_probs=64.3
Q ss_pred CCCCCcccCCccccCCCCCCEEEccCCC-CCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCC
Q 007935 73 PNRNLTGYMPSELGLLNSLTRLSLASNN-FSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNG 151 (584)
Q Consensus 73 ~~~~l~~~~~~~~~~l~~L~~L~l~~n~-l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 151 (584)
+++++. ..|..+..+++|++|++++|+ |+..-+..|.++++|+.|+|++|+|+...|..|..+++|++|+|++|+|+
T Consensus 16 ~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~- 93 (156)
T d2ifga3 16 TRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALE- 93 (156)
T ss_dssp CSSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCS-
T ss_pred cCCCCc-cCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccCCCCc-
Confidence 334444 345667777788888886654 66544556777777777777777777665666777777777777777776
Q ss_pred CchHHhhccccCccEEEeccccC
Q 007935 152 SLPEFLLDLRALTGTLNLSFNQF 174 (584)
Q Consensus 152 ~~p~~~~~l~~L~~~l~l~~N~l 174 (584)
.+|........|+ .|+|++|+|
T Consensus 94 ~l~~~~~~~~~l~-~L~L~~Np~ 115 (156)
T d2ifga3 94 SLSWKTVQGLSLQ-ELVLSGNPL 115 (156)
T ss_dssp CCCSTTTCSCCCC-EEECCSSCC
T ss_pred ccChhhhcccccc-ccccCCCcc
Confidence 4444433333555 566666655
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.35 E-value=1.3e-14 Score=131.81 Aligned_cols=119 Identities=26% Similarity=0.257 Sum_probs=101.5
Q ss_pred cCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhc
Q 007935 80 YMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLD 159 (584)
Q Consensus 80 ~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~ 159 (584)
.++.++..|++|++|+|++|+|+. ++ .+..+++|+.|+|++|+|+ .+|..+..+++|+.|++++|+++ .++ .+..
T Consensus 39 ~l~~sl~~L~~L~~L~Ls~n~I~~-i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~-~l~-~~~~ 113 (198)
T d1m9la_ 39 KMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIA-SLS-GIEK 113 (198)
T ss_dssp CCHHHHHHTTTCCEEECSEEEESC-CC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECC-CHH-HHHH
T ss_pred hhhhHHhcccccceeECcccCCCC-cc-cccCCccccChhhcccccc-ccccccccccccccccccccccc-ccc-cccc
Confidence 456789999999999999999985 55 5889999999999999998 67766666778999999999998 554 5889
Q ss_pred cccCccEEEeccccCccccC-ccccCCCCCcEEEeecCCCccCCCC
Q 007935 160 LRALTGTLNLSFNQFSGQIP-EMYGHFPVMVSLDLRNNNLSGEIPQ 204 (584)
Q Consensus 160 l~~L~~~l~l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~ 204 (584)
+++|+ .|+|++|+|+.... ..+..+++|+.|+|++|.++...+.
T Consensus 114 l~~L~-~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~ 158 (198)
T d1m9la_ 114 LVNLR-VLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp HHHSS-EEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHHHHHCT
T ss_pred ccccc-ccccccchhccccccccccCCCccceeecCCCccccCccc
Confidence 99999 99999999984322 4689999999999999998876553
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=99.35 E-value=3.2e-12 Score=118.73 Aligned_cols=145 Identities=26% Similarity=0.330 Sum_probs=77.1
Q ss_pred CEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecc
Q 007935 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLS 145 (584)
Q Consensus 66 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls 145 (584)
.++.|++.+|+|+. ++ .+..+++|++|++++|.+++..| +..+++|++|++++|.++ .++ .+..+++|+.++++
T Consensus 42 ~L~~L~l~~~~i~~-l~-~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~~~-~i~-~l~~l~~L~~l~l~ 115 (227)
T d1h6ua2 42 GITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLK-NVS-AIAGLQSIKTLDLT 115 (227)
T ss_dssp TCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCS-CCG-GGTTCTTCCEEECT
T ss_pred CcCEEECCCCCCCc-ch-hHhcCCCCcEeecCCceeecccc--cccccccccccccccccc-ccc-cccccccccccccc
Confidence 45555555555553 22 35555555555555555554222 455555555555555554 222 24445555555555
Q ss_pred cCCCCCCch--------------------HHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCC
Q 007935 146 SNLLNGSLP--------------------EFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQV 205 (584)
Q Consensus 146 ~N~l~~~~p--------------------~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~ 205 (584)
+|...+..+ ..+...++|+ .|++++|.+++.. .++++++|+.|+|++|.+++ +|.+
T Consensus 116 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~-~L~l~~n~~~~~~--~l~~l~~L~~L~Ls~n~l~~-l~~l 191 (227)
T d1h6ua2 116 STQITDVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQ-YLSIGNAQVSDLT--PLANLSKLTTLKADDNKISD-ISPL 191 (227)
T ss_dssp TSCCCCCGGGTTCTTCCEEECCSSCCCCCGGGGGCTTCC-EEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCC-CGGG
T ss_pred cccccccchhccccchhhhhchhhhhchhhhhccccccc-cccccccccccch--hhcccccceecccCCCccCC-Chhh
Confidence 554442211 1244555666 6677776665332 26666777777777777665 3334
Q ss_pred CCccccCCcccCCCC
Q 007935 206 GSLLNQGPTAFSGNP 220 (584)
Q Consensus 206 ~~~~~~~~~~~~~n~ 220 (584)
..+.++..+.+++|.
T Consensus 192 ~~l~~L~~L~Ls~N~ 206 (227)
T d1h6ua2 192 ASLPNLIEVHLKNNQ 206 (227)
T ss_dssp GGCTTCCEEECTTSC
T ss_pred cCCCCCCEEECcCCc
Confidence 555555556665553
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.34 E-value=1.6e-12 Score=112.75 Aligned_cols=108 Identities=20% Similarity=0.156 Sum_probs=91.4
Q ss_pred CCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCc-ccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEE
Q 007935 89 NSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNS-FCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTL 167 (584)
Q Consensus 89 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l 167 (584)
...+.++++++++. .+|..+..+++|+.|+|++|+ |+..-+..|.++++|+.|+|++|+|+...|..|..+++|+ .|
T Consensus 8 ~~~~~l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~-~L 85 (156)
T d2ifga3 8 HGSSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLS-RL 85 (156)
T ss_dssp SSSSCEECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCC-EE
T ss_pred CCCCeEEecCCCCc-cCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCccccccccccccc-ce
Confidence 34556899999997 478889999999999998775 8866667899999999999999999976788899999999 99
Q ss_pred EeccccCccccCccccCCCCCcEEEeecCCCc
Q 007935 168 NLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLS 199 (584)
Q Consensus 168 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 199 (584)
+|++|+|+...+..|..+ +|+.|+|++|.+.
T Consensus 86 ~Ls~N~l~~l~~~~~~~~-~l~~L~L~~Np~~ 116 (156)
T d2ifga3 86 NLSFNALESLSWKTVQGL-SLQELVLSGNPLH 116 (156)
T ss_dssp ECCSSCCSCCCSTTTCSC-CCCEEECCSSCCC
T ss_pred eccCCCCcccChhhhccc-cccccccCCCccc
Confidence 999999995555555544 7999999999885
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=99.32 E-value=4.1e-12 Score=117.98 Aligned_cols=141 Identities=26% Similarity=0.382 Sum_probs=111.7
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCC--------------
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIP-------------- 130 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-------------- 130 (584)
.+++.|+|++|++++..| +..+++|+.|++++|.++. ++ .+..+++|+.|++++|++.+..+
T Consensus 63 ~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~~~~-i~-~l~~l~~L~~l~l~~~~~~~~~~~~~~~~~~~l~~~~ 138 (227)
T d1h6ua2 63 NNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDL 138 (227)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCCCGGGTTCTTCCEEECCS
T ss_pred CCCcEeecCCceeecccc--ccccccccccccccccccc-cc-cccccccccccccccccccccchhccccchhhhhchh
Confidence 579999999999986543 8999999999999999874 44 68889999999999888764322
Q ss_pred ------cccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCC
Q 007935 131 ------DRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ 204 (584)
Q Consensus 131 ------~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 204 (584)
..+.++++|+.|++++|.+++..+ +.++++|+ .|+|++|++++ ++ .+.++++|++|+|++|++++..|
T Consensus 139 ~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~--l~~l~~L~-~L~Ls~n~l~~-l~-~l~~l~~L~~L~Ls~N~lt~i~~- 212 (227)
T d1h6ua2 139 NQITNISPLAGLTNLQYLSIGNAQVSDLTP--LANLSKLT-TLKADDNKISD-IS-PLASLPNLIEVHLKNNQISDVSP- 212 (227)
T ss_dssp SCCCCCGGGGGCTTCCEEECCSSCCCCCGG--GTTCTTCC-EEECCSSCCCC-CG-GGGGCTTCCEEECTTSCCCBCGG-
T ss_pred hhhchhhhhccccccccccccccccccchh--hcccccce-ecccCCCccCC-Ch-hhcCCCCCCEEECcCCcCCCCcc-
Confidence 124567789999999999984333 88999999 99999999985 44 38899999999999999996543
Q ss_pred CCCccccCCcc
Q 007935 205 VGSLLNQGPTA 215 (584)
Q Consensus 205 ~~~~~~~~~~~ 215 (584)
+..+.++..+.
T Consensus 213 l~~l~~L~~L~ 223 (227)
T d1h6ua2 213 LANTSNLFIVT 223 (227)
T ss_dssp GTTCTTCCEEE
T ss_pred cccCCCCCEEE
Confidence 44555444433
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.31 E-value=1.5e-12 Score=117.36 Aligned_cols=140 Identities=13% Similarity=0.116 Sum_probs=97.6
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcc-----------------hhhHhHHHHHHHHHhcCCCcee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-----------------WRFKDFESEVEAIARVQHPNIV 408 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~-----------------~~~~~f~~Ei~~l~~l~HpnIV 408 (584)
-++.||+|+||+||+|+..++ +.||||.++..... .....+.+|...+.+++|.+++
T Consensus 4 vg~~IG~G~~g~Vy~a~~~~g------~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~ 77 (191)
T d1zara2 4 IGKLMGEGKESAVFNCYSEKF------GECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVP 77 (191)
T ss_dssp EEEEEEECSSEEEEEEEETTT------EEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSC
T ss_pred hCCEeeeCcceEEEEEECCCC------CEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcc
Confidence 467899999999999998766 89999987643110 0123456788999999999999
Q ss_pred eeeEEEEeCCceeEeeecccCCcH------------------HHHHhccc--ccccCCCCccccccCeEEecCCCccccc
Q 007935 409 RLKAFYYANDEKLLISDFIRNGSL------------------YAALHGFG--LNRLLPGTSKVTKNETIVTSGTGSRISA 468 (584)
Q Consensus 409 ~l~g~~~~~~~~~lV~Ey~~~GsL------------------~~~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 468 (584)
..+++. ..++||||++++.+ ..+||..| |+|++++|+.+..++ ++..|||.....
T Consensus 78 ~~~~~~----~~~lvme~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~~~-~~liDFG~a~~~ 152 (191)
T d1zara2 78 KVYAWE----GNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSEEG-IWIIDFPQSVEV 152 (191)
T ss_dssp CEEEEE----TTEEEEECCCCEEGGGCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEETTE-EEECCCTTCEET
T ss_pred eEEEec----CCEEEEEeeccccccchhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeeeCCC-EEEEECCCcccC
Confidence 987653 34799999998765 35666655 789999999887655 455699865443
Q ss_pred CCCcccCccccc---------cCCCCCCccchhhHHHHH
Q 007935 469 ISNVYLAPEARI---------YGSKFTQKCDVYSFGIVL 498 (584)
Q Consensus 469 gt~~y~aPE~~~---------~~~~~~~ksDV~SfGvvl 498 (584)
+.+ .+.+++. ..+.|+.++||||..--+
T Consensus 153 ~~~--~~~~~l~rd~~~~~~~f~r~y~~~~d~~s~~~~~ 189 (191)
T d1zara2 153 GEE--GWREILERDVRNIITYFSRTYRTEKDINSAIDRI 189 (191)
T ss_dssp TST--THHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_pred CCC--CcHHHHHHHHHHHHHHHcCCCCCcccHHHHHHHH
Confidence 322 1222211 014678999999976444
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.30 E-value=3.1e-12 Score=119.97 Aligned_cols=156 Identities=13% Similarity=0.064 Sum_probs=117.1
Q ss_pred CCCCcceeeEecC-----------CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCc-ccccCCCCCCEEe
Q 007935 52 STPCHWSGIHCIR-----------NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIP-ANLFNATNLVYLD 119 (584)
Q Consensus 52 ~~~c~w~gv~c~~-----------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p-~~~~~l~~L~~L~ 119 (584)
.|-|....|.|.. ..++.|+|++|+|+...+..|.++++|++|+|++|.+...+| ..|..++++++|+
T Consensus 5 ~C~C~~~~i~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~ 84 (242)
T d1xwdc1 5 ICHCSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIR 84 (242)
T ss_dssp SEEECSSEEEEESCSCSSCCSCSCSCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEE
T ss_pred cCCCcCCEEEEeCCCCCCcCCCCCCCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeecccccccccccccc
Confidence 4667888888863 358899999999986666788999999999999999887554 4577899999998
Q ss_pred cC-CCcccCCCCcccCCCCCCCeeecccCCCCCCch-HHhhccccCccEEEeccccCccccCccccCCC-CCcEEEeecC
Q 007935 120 LA-HNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLP-EFLLDLRALTGTLNLSFNQFSGQIPEMYGHFP-VMVSLDLRNN 196 (584)
Q Consensus 120 l~-~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p-~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~-~L~~L~l~~N 196 (584)
+. .|++....+..|.++++|+.|++++|.++...+ ..+..+..+. .+..+++++....+..|..++ .++.|++++|
T Consensus 85 ~~~~n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~-~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n 163 (242)
T d1xwdc1 85 IEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVL-LDIQDNINIHTIERNSFVGLSFESVILWLNKN 163 (242)
T ss_dssp EECCTTCCEECTTSEECCTTCCEEEEESCCCCSCCCCTTTCBSSCEE-EEEESCTTCCEECTTSSTTSBSSCEEEECCSS
T ss_pred ccccccccccccccccccccccccccchhhhcccccccccccccccc-cccccccccccccccccccccccceeeecccc
Confidence 76 477877777888999999999999999874322 2334455555 566677777766666676665 6888888888
Q ss_pred CCccCCCCCCCc
Q 007935 197 NLSGEIPQVGSL 208 (584)
Q Consensus 197 ~l~~~~p~~~~~ 208 (584)
.++...+.....
T Consensus 164 ~l~~i~~~~~~~ 175 (242)
T d1xwdc1 164 GIQEIHNCAFNG 175 (242)
T ss_dssp CCCEECTTTTTT
T ss_pred cccccccccccc
Confidence 888765544333
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=99.30 E-value=3.5e-12 Score=128.20 Aligned_cols=123 Identities=27% Similarity=0.387 Sum_probs=98.8
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCc--------------------ccccCCCCCCEEecCCCc
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIP--------------------ANLFNATNLVYLDLAHNS 124 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p--------------------~~~~~l~~L~~L~l~~N~ 124 (584)
..++.|++++|.+++.. .++.+++|+.|++++|.+++..+ ..+..+++++.|+|++|+
T Consensus 241 ~~L~~L~l~~n~l~~~~--~~~~~~~L~~L~l~~~~l~~~~~~~~~~~l~~l~~~~n~l~~~~~~~~~~~l~~L~ls~n~ 318 (384)
T d2omza2 241 TNLTDLDLANNQISNLA--PLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNN 318 (384)
T ss_dssp TTCSEEECCSSCCCCCG--GGTTCTTCSEEECCSSCCCCCGGGTTCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSC
T ss_pred cccchhccccCccCCCC--cccccccCCEeeccCcccCCCCccccccccccccccccccccccccchhcccCeEECCCCC
Confidence 45777777777777543 26667777777777777665322 235567899999999999
Q ss_pred ccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecC
Q 007935 125 FCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNN 196 (584)
Q Consensus 125 l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N 196 (584)
+++.. .+..+++|+.|+|++|+|+ .+| .+.++++|+ .|++++|+|++..| +.++++|+.|+|++|
T Consensus 319 l~~l~--~l~~l~~L~~L~L~~n~l~-~l~-~l~~l~~L~-~L~l~~N~l~~l~~--l~~l~~L~~L~L~~N 383 (384)
T d2omza2 319 ISDIS--PVSSLTKLQRLFFANNKVS-DVS-SLANLTNIN-WLSAGHNQISDLTP--LANLTRITQLGLNDQ 383 (384)
T ss_dssp CSCCG--GGGGCTTCCEEECCSSCCC-CCG-GGGGCTTCC-EEECCSSCCCBCGG--GTTCTTCSEEECCCE
T ss_pred CCCCc--ccccCCCCCEEECCCCCCC-CCh-hHcCCCCCC-EEECCCCcCCCChh--hccCCCCCEeeCCCC
Confidence 99653 3889999999999999998 466 699999999 99999999997665 899999999999998
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.24 E-value=5.6e-14 Score=127.50 Aligned_cols=121 Identities=26% Similarity=0.252 Sum_probs=101.5
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|+|++|+|+. ++ .|..+++|+.|+|++|.|+ .+|..+..+++|++|++++|+++. ++ .+..+++|+.|+|
T Consensus 48 ~~L~~L~Ls~n~I~~-i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~-l~-~~~~l~~L~~L~L 122 (198)
T d1m9la_ 48 KACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYM 122 (198)
T ss_dssp TTCCEEECSEEEESC-CC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCC-HH-HHHHHHHSSEEEE
T ss_pred cccceeECcccCCCC-cc-cccCCccccChhhcccccc-cccccccccccccccccccccccc-cc-ccccccccccccc
Confidence 579999999999984 44 5999999999999999998 467656666789999999999984 43 4888999999999
Q ss_pred ccCCCCCCch--HHhhccccCccEEEeccccCccccCcc----------ccCCCCCcEEE
Q 007935 145 SSNLLNGSLP--EFLLDLRALTGTLNLSFNQFSGQIPEM----------YGHFPVMVSLD 192 (584)
Q Consensus 145 s~N~l~~~~p--~~~~~l~~L~~~l~l~~N~l~~~~p~~----------~~~l~~L~~L~ 192 (584)
++|+++ .++ ..+..+++|+ .|+|++|++....+.. +..+++|+.||
T Consensus 123 ~~N~i~-~~~~~~~l~~l~~L~-~L~L~~N~l~~~~~~~~~~~~~r~~vi~~lp~L~~LD 180 (198)
T d1m9la_ 123 SNNKIT-NWGEIDKLAALDKLE-DLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD 180 (198)
T ss_dssp SEEECC-CHHHHHHHTTTTTCS-EEEECSSHHHHHHCTTTTHHHHHHHHHHHCSSCCEES
T ss_pred ccchhc-cccccccccCCCccc-eeecCCCccccCcccccchhhHHHHHHHHCCCcCEeC
Confidence 999998 555 4789999999 9999999997655443 55688888876
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.06 E-value=1.8e-10 Score=107.61 Aligned_cols=138 Identities=14% Similarity=0.108 Sum_probs=94.5
Q ss_pred CCEEEEEcCCCCCcccC-CccccCCCCCCEEEccC-CCCCCCCcccccCCCCCCEEecCCCcccCCCCc-----------
Q 007935 65 NRVTSLYLPNRNLTGYM-PSELGLLNSLTRLSLAS-NNFSKPIPANLFNATNLVYLDLAHNSFCGPIPD----------- 131 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~-~~~~~~l~~L~~L~l~~-n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~----------- 131 (584)
.+++.|+|++|.+...+ +..|..++.+++|++.. |++....+..|.++++|++|++++|++....+.
T Consensus 53 ~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~ 132 (242)
T d1xwdc1 53 GDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLL 132 (242)
T ss_dssp TTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSEECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEE
T ss_pred chhhhhhhccccccceeeccccccccccccccccccccccccccccccccccccccccchhhhccccccccccccccccc
Confidence 46888899888887655 45678888888888764 677766677788888888888888887642221
Q ss_pred --------------ccCCC-CCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecC
Q 007935 132 --------------RIKTL-KNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNN 196 (584)
Q Consensus 132 --------------~~~~l-~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N 196 (584)
.|.++ ..++.|++++|+++ .++........+...+++++|+++...+..|.++++|+.|+|++|
T Consensus 133 ~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~-~i~~~~~~~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N 211 (242)
T d1xwdc1 133 DIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-EIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRT 211 (242)
T ss_dssp EEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-EECTTTTTTCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTS
T ss_pred ccccccccccccccccccccccceeeeccccccc-ccccccccchhhhccccccccccccccHHHhcCCCCCCEEECCCC
Confidence 11222 24566777777777 455544455555524456777787544556788888888888888
Q ss_pred CCccCCC
Q 007935 197 NLSGEIP 203 (584)
Q Consensus 197 ~l~~~~p 203 (584)
+|+...+
T Consensus 212 ~l~~l~~ 218 (242)
T d1xwdc1 212 RIHSLPS 218 (242)
T ss_dssp CCCCCCS
T ss_pred cCCccCH
Confidence 8875443
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=98.90 E-value=3.5e-09 Score=104.21 Aligned_cols=97 Identities=25% Similarity=0.318 Sum_probs=77.1
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|+|++++|+ .+|+. +++|++|+|++|+|+ .+|.. +.+|+.|++++|+++ .++.. .+.|++|+|
T Consensus 38 ~~l~~LdLs~~~L~-~lp~~---~~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~l~~n~l~-~l~~l---p~~L~~L~L 105 (353)
T d1jl5a_ 38 RQAHELELNNLGLS-SLPEL---PPHLESLVASCNSLT-ELPEL---PQSLKSLLVDNNNLK-ALSDL---PPLLEYLGV 105 (353)
T ss_dssp HTCSEEECTTSCCS-CCCSC---CTTCSEEECCSSCCS-SCCCC---CTTCCEEECCSSCCS-CCCSC---CTTCCEEEC
T ss_pred cCCCEEEeCCCCCC-CCCCC---CCCCCEEECCCCCCc-ccccc---hhhhhhhhhhhcccc-hhhhh---ccccccccc
Confidence 46889999999998 56753 568999999999998 57865 457889999999987 44431 246999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCcc
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSG 176 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~ 176 (584)
++|.++ .+|. +..++.|+ .|++++|.++.
T Consensus 106 ~~n~l~-~lp~-~~~l~~L~-~L~l~~~~~~~ 134 (353)
T d1jl5a_ 106 SNNQLE-KLPE-LQNSSFLK-IIDVDNNSLKK 134 (353)
T ss_dssp CSSCCS-SCCC-CTTCTTCC-EEECCSSCCSC
T ss_pred cccccc-cccc-hhhhccce-eeccccccccc
Confidence 999998 6775 67888998 99999998874
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.73 E-value=1.1e-09 Score=104.67 Aligned_cols=133 Identities=23% Similarity=0.258 Sum_probs=73.2
Q ss_pred CEEEEEcCCCCCccc-CCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCC-cccCC-CCcccCCCCCCCee
Q 007935 66 RVTSLYLPNRNLTGY-MPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHN-SFCGP-IPDRIKTLKNLTHL 142 (584)
Q Consensus 66 ~v~~l~l~~~~l~~~-~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N-~l~~~-~p~~~~~l~~L~~L 142 (584)
+++.|+|+++.++.. +...+..+++|++|+|++|.+++..+..+..+++|++|+|+++ .++.. +...+.++++|++|
T Consensus 47 ~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~L 126 (284)
T d2astb2 47 RVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDEL 126 (284)
T ss_dssp CCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEE
T ss_pred CCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhcccc
Confidence 567777777666543 3444566677777777777766655666666677777777663 44311 11122345566666
Q ss_pred ecccC-CCCCC-----------------------------chHHhhccccCccEEEeccc-cCccccCccccCCCCCcEE
Q 007935 143 DLSSN-LLNGS-----------------------------LPEFLLDLRALTGTLNLSFN-QFSGQIPEMYGHFPVMVSL 191 (584)
Q Consensus 143 ~ls~N-~l~~~-----------------------------~p~~~~~l~~L~~~l~l~~N-~l~~~~p~~~~~l~~L~~L 191 (584)
+|+++ .++.. +...+.++++|+ .|++++| .+++.....+.++++|++|
T Consensus 127 ~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~-~L~L~~~~~itd~~~~~l~~~~~L~~L 205 (284)
T d2astb2 127 NLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLV-HLDLSDSVMLKNDCFQEFFQLNYLQHL 205 (284)
T ss_dssp ECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCS-EEECTTCTTCCGGGGGGGGGCTTCCEE
T ss_pred ccccccccccccchhhhcccccccchhhhccccccccccccccccccccccc-ccccccccCCCchhhhhhcccCcCCEE
Confidence 66553 33211 112223445565 6666554 3555555555566666666
Q ss_pred Eeec-CCCc
Q 007935 192 DLRN-NNLS 199 (584)
Q Consensus 192 ~l~~-N~l~ 199 (584)
+|++ +.++
T Consensus 206 ~L~~C~~i~ 214 (284)
T d2astb2 206 SLSRCYDII 214 (284)
T ss_dssp ECTTCTTCC
T ss_pred ECCCCCCCC
Confidence 6665 3444
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=98.72 E-value=1.9e-08 Score=98.80 Aligned_cols=101 Identities=25% Similarity=0.321 Sum_probs=82.9
Q ss_pred CCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEE
Q 007935 89 NSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLN 168 (584)
Q Consensus 89 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~ 168 (584)
.+|++|+|++|.++ .+|+. +++|++|+|++|+|+ .+|..+ .+|+.|++++|+++ .++.. .+.|+ .|+
T Consensus 38 ~~l~~LdLs~~~L~-~lp~~---~~~L~~L~Ls~N~l~-~lp~~~---~~L~~L~l~~n~l~-~l~~l---p~~L~-~L~ 104 (353)
T d1jl5a_ 38 RQAHELELNNLGLS-SLPEL---PPHLESLVASCNSLT-ELPELP---QSLKSLLVDNNNLK-ALSDL---PPLLE-YLG 104 (353)
T ss_dssp HTCSEEECTTSCCS-CCCSC---CTTCSEEECCSSCCS-SCCCCC---TTCCEEECCSSCCS-CCCSC---CTTCC-EEE
T ss_pred cCCCEEEeCCCCCC-CCCCC---CCCCCEEECCCCCCc-ccccch---hhhhhhhhhhcccc-hhhhh---ccccc-ccc
Confidence 36899999999998 58853 578999999999999 778654 58999999999998 55531 13577 999
Q ss_pred eccccCccccCccccCCCCCcEEEeecCCCccCCCC
Q 007935 169 LSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ 204 (584)
Q Consensus 169 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 204 (584)
+++|+++ .+|. ++.+++|+.|++++|.++..++.
T Consensus 105 L~~n~l~-~lp~-~~~l~~L~~L~l~~~~~~~~~~~ 138 (353)
T d1jl5a_ 105 VSNNQLE-KLPE-LQNSSFLKIIDVDNNSLKKLPDL 138 (353)
T ss_dssp CCSSCCS-SCCC-CTTCTTCCEEECCSSCCSCCCCC
T ss_pred ccccccc-cccc-hhhhccceeeccccccccccccc
Confidence 9999998 5664 68899999999999999876653
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.61 E-value=9.6e-10 Score=95.54 Aligned_cols=106 Identities=24% Similarity=0.202 Sum_probs=68.3
Q ss_pred ccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCC--CCcccCCCCCCCeeecccCCCCCCchHHhhcccc
Q 007935 85 LGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGP--IPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRA 162 (584)
Q Consensus 85 ~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~--~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~ 162 (584)
+..+..+..|++.+|... .++..+..+++|++|+|++|+|+.. ++..+..+++|+.|||++|.++..-+-.+.....
T Consensus 38 l~~~~~~~~l~~~~~~~~-~l~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~ 116 (162)
T d1koha1 38 LVAQNIDVVLNRRSSMAA-TLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLK 116 (162)
T ss_dssp TTTTTCCCCTTSHHHHHH-HHHHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCC
T ss_pred hhhccchhhcchhhhHhh-hhHHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccc
Confidence 344444444555444332 3444445678888888888888753 2345667888888888888888333324444556
Q ss_pred CccEEEeccccCccccCc-------cccCCCCCcEEE
Q 007935 163 LTGTLNLSFNQFSGQIPE-------MYGHFPVMVSLD 192 (584)
Q Consensus 163 L~~~l~l~~N~l~~~~p~-------~~~~l~~L~~L~ 192 (584)
|+ .|++++|+++..... .+..+|+|+.||
T Consensus 117 L~-~L~L~~Npl~~~~~~~~~y~~~i~~~~P~L~~LD 152 (162)
T d1koha1 117 LE-ELWLDGNSLSDTFRDQSTYISAIRERFPKLLRLD 152 (162)
T ss_dssp CS-SCCCTTSTTSSSSSSHHHHHHHHHTTSTTCCEET
T ss_pred cc-eeecCCCCcCcCcccchhHHHHHHHHCCCCCEEC
Confidence 77 888888888765443 255678888775
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.60 E-value=5.3e-09 Score=99.88 Aligned_cols=131 Identities=24% Similarity=0.310 Sum_probs=96.7
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCC-CCCCC-CcccccCCCCCCEEecCCC-cccC--------C-----
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASN-NFSKP-IPANLFNATNLVYLDLAHN-SFCG--------P----- 128 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n-~l~~~-~p~~~~~l~~L~~L~l~~N-~l~~--------~----- 128 (584)
.++++|+|+++++++..+..++.+++|++|+|+++ .++.. +..-+.++++|++|+|+++ +++. .
T Consensus 71 ~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~L~ls~c~~~~~~~~~~~~~~~~~~L 150 (284)
T d2astb2 71 SKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETI 150 (284)
T ss_dssp CCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTC
T ss_pred CCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhccccccccccccccccchhhhccccccc
Confidence 46888888888887777777888888888888884 45421 2222345677777777764 2221 0
Q ss_pred ----------------CCcccCCCCCCCeeecccC-CCCCCchHHhhccccCccEEEecc-ccCccccCccccCCCCCcE
Q 007935 129 ----------------IPDRIKTLKNLTHLDLSSN-LLNGSLPEFLLDLRALTGTLNLSF-NQFSGQIPEMYGHFPVMVS 190 (584)
Q Consensus 129 ----------------~p~~~~~l~~L~~L~ls~N-~l~~~~p~~~~~l~~L~~~l~l~~-N~l~~~~p~~~~~l~~L~~ 190 (584)
+...+..+++|++|+|++| .+++.....+..+++|+ .|+|++ +.+++.....++++++|+.
T Consensus 151 ~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~-~L~L~~C~~i~~~~l~~L~~~~~L~~ 229 (284)
T d2astb2 151 TQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQ-HLSLSRCYDIIPETLLELGEIPTLKT 229 (284)
T ss_dssp CEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCC-EEECTTCTTCCGGGGGGGGGCTTCCE
T ss_pred chhhhcccccccccccccccccccccccccccccccCCCchhhhhhcccCcCC-EEECCCCCCCChHHHHHHhcCCCCCE
Confidence 0011235689999999986 58878888899999999 999999 5788777778899999999
Q ss_pred EEeecC
Q 007935 191 LDLRNN 196 (584)
Q Consensus 191 L~l~~N 196 (584)
|+++++
T Consensus 230 L~l~~~ 235 (284)
T d2astb2 230 LQVFGI 235 (284)
T ss_dssp EECTTS
T ss_pred EeeeCC
Confidence 999887
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=98.49 E-value=9.1e-09 Score=101.20 Aligned_cols=135 Identities=17% Similarity=0.163 Sum_probs=83.5
Q ss_pred CCEEEEEcCCCCCc--------ccC-----CccccCCCCCCEEEccCCCCCCC----CcccccCCCCCCEEecCCCcccC
Q 007935 65 NRVTSLYLPNRNLT--------GYM-----PSELGLLNSLTRLSLASNNFSKP----IPANLFNATNLVYLDLAHNSFCG 127 (584)
Q Consensus 65 ~~v~~l~l~~~~l~--------~~~-----~~~~~~l~~L~~L~l~~n~l~~~----~p~~~~~l~~L~~L~l~~N~l~~ 127 (584)
..++.|+|++|.+. ..+ .......+.|+.|++++|+++.. +...+...++|+.|+|++|+++.
T Consensus 121 ~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~ 200 (344)
T d2ca6a1 121 TPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRP 200 (344)
T ss_dssp TTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCH
T ss_pred ccchheecccccccccccccccccccccccccccccCcccceeecccccccccccccccchhhhhhhhcccccccccccc
Confidence 46888888888752 001 11223556778888888777532 22234456778888888887753
Q ss_pred C-----CCcccCCCCCCCeeecccCCCCCC----chHHhhccccCccEEEeccccCccccCcc----ccC--CCCCcEEE
Q 007935 128 P-----IPDRIKTLKNLTHLDLSSNLLNGS----LPEFLLDLRALTGTLNLSFNQFSGQIPEM----YGH--FPVMVSLD 192 (584)
Q Consensus 128 ~-----~p~~~~~l~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~~l~l~~N~l~~~~p~~----~~~--l~~L~~L~ 192 (584)
. +...+..+++|+.|+|++|.++.. +...+..++.|+ .|+|++|.|++.-... +.. .+.|+.|+
T Consensus 201 ~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~-~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ 279 (344)
T d2ca6a1 201 EGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLR-ELGLNDCLLSARGAAAVVDAFSKLENIGLQTLR 279 (344)
T ss_dssp HHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCC-EEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEE
T ss_pred cccccchhhhhcchhhhcccccccccccccccccccccccccccch-hhhhhcCccCchhhHHHHHHhhhccCCCCCEEE
Confidence 1 233456677788888888877522 344566777777 7888888776532222 222 34677888
Q ss_pred eecCCCcc
Q 007935 193 LRNNNLSG 200 (584)
Q Consensus 193 l~~N~l~~ 200 (584)
+++|+|+.
T Consensus 280 ls~N~i~~ 287 (344)
T d2ca6a1 280 LQYNEIEL 287 (344)
T ss_dssp CCSSCCBH
T ss_pred CCCCcCCh
Confidence 88887753
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=98.42 E-value=1.2e-08 Score=100.22 Aligned_cols=134 Identities=18% Similarity=0.145 Sum_probs=67.2
Q ss_pred CCEEEEEcCCCCCccc----------CCccccCCCCCCEEEccCCCCCCC----CcccccCCCCCCEEecCCCcccCCCC
Q 007935 65 NRVTSLYLPNRNLTGY----------MPSELGLLNSLTRLSLASNNFSKP----IPANLFNATNLVYLDLAHNSFCGPIP 130 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~----------~~~~~~~l~~L~~L~l~~n~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~p 130 (584)
.+++.|+++++..... +...+...++|++|+|++|.++.. +...+...++|++|+|++|.+...-.
T Consensus 59 ~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~ 138 (344)
T d2ca6a1 59 KDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAG 138 (344)
T ss_dssp TTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHH
T ss_pred CCCCEEECCCCcccccccccchHHHHHHHHHhhCCCcccccccccccccccccchhhhhcccccchheeccccccccccc
Confidence 3566666665543211 112344456666666666666543 22233345666666666666531100
Q ss_pred c-------------ccCCCCCCCeeecccCCCCCC----chHHhhccccCccEEEeccccCccc-----cCccccCCCCC
Q 007935 131 D-------------RIKTLKNLTHLDLSSNLLNGS----LPEFLLDLRALTGTLNLSFNQFSGQ-----IPEMYGHFPVM 188 (584)
Q Consensus 131 ~-------------~~~~l~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~~l~l~~N~l~~~-----~p~~~~~l~~L 188 (584)
. .......|+.|++++|.++.. +...+.....|+ .|+|++|+++.. +...+..+++|
T Consensus 139 ~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~l~~~~~L~-~L~L~~n~i~~~g~~~~l~~~l~~~~~L 217 (344)
T d2ca6a1 139 AKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLH-TVKMVQNGIRPEGIEHLLLEGLAYCQEL 217 (344)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCC-EEECCSSCCCHHHHHHHHHTTGGGCTTC
T ss_pred ccccccccccccccccccCcccceeecccccccccccccccchhhhhhhhc-ccccccccccccccccchhhhhcchhhh
Confidence 0 012344566666666665421 223344455566 666666665421 23334555566
Q ss_pred cEEEeecCCCc
Q 007935 189 VSLDLRNNNLS 199 (584)
Q Consensus 189 ~~L~l~~N~l~ 199 (584)
+.|+|++|.++
T Consensus 218 ~~L~Ls~N~i~ 228 (344)
T d2ca6a1 218 KVLDLQDNTFT 228 (344)
T ss_dssp CEEECCSSCCH
T ss_pred ccccccccccc
Confidence 66666666654
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.33 E-value=3.9e-08 Score=100.13 Aligned_cols=110 Identities=23% Similarity=0.264 Sum_probs=71.4
Q ss_pred CEEEEEcCCCCCcccC-CccccCCCCCCEEEccCCCCCC----CCcccccCCCCCCEEecCCCcccCC----CCcccC-C
Q 007935 66 RVTSLYLPNRNLTGYM-PSELGLLNSLTRLSLASNNFSK----PIPANLFNATNLVYLDLAHNSFCGP----IPDRIK-T 135 (584)
Q Consensus 66 ~v~~l~l~~~~l~~~~-~~~~~~l~~L~~L~l~~n~l~~----~~p~~~~~l~~L~~L~l~~N~l~~~----~p~~~~-~ 135 (584)
+|+.||++.|++++.. ..-+..+++|++|+|++|.|+. .++..+..+++|++|||++|+|+.. +...+. .
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~ 82 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 82 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcC
Confidence 5788888888887542 3445667788888888888762 2344566778888888888877521 122222 2
Q ss_pred CCCCCeeecccCCCCCC----chHHhhccccCccEEEeccccCcc
Q 007935 136 LKNLTHLDLSSNLLNGS----LPEFLLDLRALTGTLNLSFNQFSG 176 (584)
Q Consensus 136 l~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~~l~l~~N~l~~ 176 (584)
..+|+.|+|++|+++.. ++..+..++.|+ .|+|++|+++.
T Consensus 83 ~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~-~L~L~~N~i~~ 126 (460)
T d1z7xw1 83 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQ-ELHLSDNLLGD 126 (460)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCC-EEECCSSBCHH
T ss_pred CCCCCEEECCCCCccccccccccchhhcccccc-ccccccccchh
Confidence 34677777777777633 344555666676 77777776653
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.28 E-value=2.7e-08 Score=86.09 Aligned_cols=108 Identities=21% Similarity=0.117 Sum_probs=75.6
Q ss_pred CCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCC--chHHhhccccCccEE
Q 007935 90 SLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGS--LPEFLLDLRALTGTL 167 (584)
Q Consensus 90 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~--~p~~~~~l~~L~~~l 167 (584)
..+.|+++++... ..+..+..+..|++.+|... .++..+..+++|++|||++|+|+.. ++..+..+++|+ .|
T Consensus 23 ~~~~Ldls~l~~~----~~l~~~~~~~~l~~~~~~~~-~l~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~-~L 96 (162)
T d1koha1 23 SQQALDLKGLRSD----PDLVAQNIDVVLNRRSSMAA-TLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLK-IL 96 (162)
T ss_dssp SSCCBCCCCCSSC----TTTTTTTCCCCTTSHHHHHH-HHHHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCC-CC
T ss_pred hhCeeecccCCCC----chhhhccchhhcchhhhHhh-hhHHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCccc-cc
Confidence 3455666655432 24555555666666665544 4555556789999999999999853 346678899999 99
Q ss_pred EeccccCccccCccccCCCCCcEEEeecCCCccCCC
Q 007935 168 NLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIP 203 (584)
Q Consensus 168 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 203 (584)
+|++|.++...+-.+....+|+.|++++|.++....
T Consensus 97 ~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~ 132 (162)
T d1koha1 97 NLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFR 132 (162)
T ss_dssp CCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSS
T ss_pred ccccCccccchhhhhhhccccceeecCCCCcCcCcc
Confidence 999999985433234445678999999999986543
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.27 E-value=7.7e-08 Score=97.81 Aligned_cols=135 Identities=24% Similarity=0.163 Sum_probs=90.4
Q ss_pred CCEEEEEcCCCCCcccC----CccccCCCCCCEEEccCCCCCCCCcccc-----cCCCCCCEEecCCCcccCCCCc----
Q 007935 65 NRVTSLYLPNRNLTGYM----PSELGLLNSLTRLSLASNNFSKPIPANL-----FNATNLVYLDLAHNSFCGPIPD---- 131 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~----~~~~~~l~~L~~L~l~~n~l~~~~p~~~-----~~l~~L~~L~l~~N~l~~~~p~---- 131 (584)
..++.|++++|.+.... ...+...+.++.+++++|.++......+ .....|+.+++++|.++..-..
T Consensus 255 ~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~~~~~~l~~~l~~~~~~L~~l~l~~~~l~~~~~~~l~~ 334 (460)
T d1z7xw1 255 SRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSS 334 (460)
T ss_dssp CCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccchhhccccccccccccccccccchhhhhhhhccc
Confidence 46888999988886432 3345667888888888888764222111 2345788888888887654222
Q ss_pred ccCCCCCCCeeecccCCCCCC----chHHhh-ccccCccEEEeccccCcc----ccCccccCCCCCcEEEeecCCCcc
Q 007935 132 RIKTLKNLTHLDLSSNLLNGS----LPEFLL-DLRALTGTLNLSFNQFSG----QIPEMYGHFPVMVSLDLRNNNLSG 200 (584)
Q Consensus 132 ~~~~l~~L~~L~ls~N~l~~~----~p~~~~-~l~~L~~~l~l~~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~~ 200 (584)
.+....+|++|||++|+++.. ++..+. ..+.|+ .|+|++|+|+. .+.+.+..+++|++|+|++|+|+.
T Consensus 335 ~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~-~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~N~i~~ 411 (460)
T d1z7xw1 335 VLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLR-VLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGD 411 (460)
T ss_dssp HHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCC-EEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCH
T ss_pred ccccccchhhhheeeecccCcccchhhhhhhcccCCCC-EEECCCCCCChHHHHHHHHHHhcCCCCCEEECCCCcCCH
Confidence 234556788888888887632 333443 345677 88888888874 245556667888888888888864
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.77 E-value=4.3e-06 Score=72.17 Aligned_cols=65 Identities=11% Similarity=0.117 Sum_probs=26.7
Q ss_pred ccCCCCCCEEEccCCCCCCC----CcccccCCCCCCEEecCCCcccCC----CCcccCCCCCCCeeecccCCC
Q 007935 85 LGLLNSLTRLSLASNNFSKP----IPANLFNATNLVYLDLAHNSFCGP----IPDRIKTLKNLTHLDLSSNLL 149 (584)
Q Consensus 85 ~~~l~~L~~L~l~~n~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~ls~N~l 149 (584)
+...++|++|+|++|.+... +...+...++|+.|+|++|.|+.. +-..+...++|+.|+|++|.+
T Consensus 40 L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~~aL~~n~sL~~L~l~~n~~ 112 (167)
T d1pgva_ 40 ACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQ 112 (167)
T ss_dssp HTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSS
T ss_pred HhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHHHHHHhCCcCCEEECCCCcC
Confidence 33444455555555544321 111222334455555555544321 112233334445555544443
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.73 E-value=8.2e-06 Score=70.30 Aligned_cols=112 Identities=14% Similarity=0.144 Sum_probs=80.3
Q ss_pred cCCCCCCEEEccCC-CCCCC----CcccccCCCCCCEEecCCCcccC----CCCcccCCCCCCCeeecccCCCCCCc---
Q 007935 86 GLLNSLTRLSLASN-NFSKP----IPANLFNATNLVYLDLAHNSFCG----PIPDRIKTLKNLTHLDLSSNLLNGSL--- 153 (584)
Q Consensus 86 ~~l~~L~~L~l~~n-~l~~~----~p~~~~~l~~L~~L~l~~N~l~~----~~p~~~~~l~~L~~L~ls~N~l~~~~--- 153 (584)
.+.++|++|+|+++ .++.. +-..+...++|+.|+|++|.+.. .+...+...+.|+.|+|++|.++..-
T Consensus 12 ~n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~ 91 (167)
T d1pgva_ 12 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 91 (167)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred hCCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHH
Confidence 34578999999874 46432 22345677899999999999973 23344566789999999999998432
Q ss_pred -hHHhhccccCccEEEeccccCccc-------cCccccCCCCCcEEEeecCCC
Q 007935 154 -PEFLLDLRALTGTLNLSFNQFSGQ-------IPEMYGHFPVMVSLDLRNNNL 198 (584)
Q Consensus 154 -p~~~~~l~~L~~~l~l~~N~l~~~-------~p~~~~~l~~L~~L~l~~N~l 198 (584)
-..+...++|+ .|+|++|.+... +...+...++|+.|+++.+..
T Consensus 92 l~~aL~~n~sL~-~L~l~~n~~~~~g~~~~~~l~~~L~~n~sL~~l~l~~~~~ 143 (167)
T d1pgva_ 92 LLRSTLVTQSIV-EFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 143 (167)
T ss_dssp HHHHTTTTCCCS-EEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHHhCCcCC-EEECCCCcCCCccHHHHHHHHHHHHhCCCccEeeCcCCCc
Confidence 23455667899 999999976521 344555678899999987754
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=97.04 E-value=4.8e-05 Score=65.23 Aligned_cols=110 Identities=19% Similarity=0.272 Sum_probs=49.8
Q ss_pred CCCCCCEEEccC-CCCCCC----CcccccCCCCCCEEecCCCcccCC----CCcccCCCCCCCeeecccCCCCCC----c
Q 007935 87 LLNSLTRLSLAS-NNFSKP----IPANLFNATNLVYLDLAHNSFCGP----IPDRIKTLKNLTHLDLSSNLLNGS----L 153 (584)
Q Consensus 87 ~l~~L~~L~l~~-n~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~ls~N~l~~~----~ 153 (584)
+.++|++|+|++ |.++.. +-..+...++|+.|+|++|.++.. +-..+...++|+.+++++|.++.. +
T Consensus 15 ~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l 94 (166)
T d1io0a_ 15 NDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILAL 94 (166)
T ss_dssp TCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHH
T ss_pred cCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHH
Confidence 344555555554 234321 112233445555555555555421 112233445566666666655422 1
Q ss_pred hHHhhccccCccEEEe--ccccCcc----ccCccccCCCCCcEEEeecCC
Q 007935 154 PEFLLDLRALTGTLNL--SFNQFSG----QIPEMYGHFPVMVSLDLRNNN 197 (584)
Q Consensus 154 p~~~~~l~~L~~~l~l--~~N~l~~----~~p~~~~~l~~L~~L~l~~N~ 197 (584)
-..+...+.|+ .++| ++|.+.. .+.+.+...++|+.|+++.|.
T Consensus 95 ~~~l~~~~~L~-~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~~~ 143 (166)
T d1io0a_ 95 VEALQSNTSLI-ELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQ 143 (166)
T ss_dssp HHGGGGCSSCC-EEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSS
T ss_pred HHHHHhCcccc-EEeeccCCCcCcHHHHHHHHHHHHhCCCcCEEeCcCCC
Confidence 12333444454 4333 3444532 233344455666666665554
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=96.77 E-value=0.00014 Score=62.06 Aligned_cols=110 Identities=17% Similarity=0.246 Sum_probs=79.3
Q ss_pred CCEEEEEcCC-CCCccc----CCccccCCCCCCEEEccCCCCCCC----CcccccCCCCCCEEecCCCcccCC----CCc
Q 007935 65 NRVTSLYLPN-RNLTGY----MPSELGLLNSLTRLSLASNNFSKP----IPANLFNATNLVYLDLAHNSFCGP----IPD 131 (584)
Q Consensus 65 ~~v~~l~l~~-~~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~----~p~ 131 (584)
..+++|+|++ +.++.. +-..+...++|++|+|++|.++.. +-..+...++|+.|++++|.++.. +-.
T Consensus 17 ~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~~ 96 (166)
T d1io0a_ 17 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVE 96 (166)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHH
T ss_pred CCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHHH
Confidence 4689999997 456532 345566789999999999998753 223345678999999999998642 334
Q ss_pred ccCCCCCCCeeec--ccCCCCC----CchHHhhccccCccEEEeccccCc
Q 007935 132 RIKTLKNLTHLDL--SSNLLNG----SLPEFLLDLRALTGTLNLSFNQFS 175 (584)
Q Consensus 132 ~~~~l~~L~~L~l--s~N~l~~----~~p~~~~~l~~L~~~l~l~~N~l~ 175 (584)
.+...++|+.++| ++|.+.. .+...+...+.|+ .|+++.|+..
T Consensus 97 ~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~-~L~l~~~~~~ 145 (166)
T d1io0a_ 97 ALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLL-KFGYHFTQQG 145 (166)
T ss_dssp GGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCC-EEECCCSSHH
T ss_pred HHHhCccccEEeeccCCCcCcHHHHHHHHHHHHhCCCcC-EEeCcCCCCc
Confidence 5677888987555 5677753 2455667788999 9999887653
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=89.78 E-value=0.32 Score=43.09 Aligned_cols=72 Identities=8% Similarity=0.118 Sum_probs=51.9
Q ss_pred eeec-CceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcC--CCceeeeeEEEEeCCceeEeeecc
Q 007935 351 GKSK-NGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ--HPNIVRLKAFYYANDEKLLISDFI 427 (584)
Q Consensus 351 G~G~-~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~--HpnIV~l~g~~~~~~~~~lV~Ey~ 427 (584)
..|. .+.||+.....+ ..+.+|.-..... ..+.+|+..++.+. .--+.++++++.+++..++||||+
T Consensus 19 ~~G~s~~~v~r~~~~~~------~~~vlK~~~~~~~----~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i 88 (255)
T d1nd4a_ 19 TIGCSDAAVFRLSAQGR------PVLFVKTDLSGAL----NELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEV 88 (255)
T ss_dssp SCTTSSCEEEEEECTTS------CCEEEEEECSCTT----SCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECC
T ss_pred CCcccCCeEEEEEeCCC------CEEEEEeCCccCH----hHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEee
Confidence 3444 367899887665 5678887654321 45788898888773 334677888888888999999999
Q ss_pred cCCcH
Q 007935 428 RNGSL 432 (584)
Q Consensus 428 ~~GsL 432 (584)
++-++
T Consensus 89 ~G~~~ 93 (255)
T d1nd4a_ 89 PGQDL 93 (255)
T ss_dssp SSEET
T ss_pred ecccc
Confidence 88665
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=88.62 E-value=0.6 Score=41.40 Aligned_cols=73 Identities=11% Similarity=0.015 Sum_probs=52.4
Q ss_pred CceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcC-CCceeeeeEEEEeCCceeEeeecccCCcHH
Q 007935 355 NGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-HPNIVRLKAFYYANDEKLLISDFIRNGSLY 433 (584)
Q Consensus 355 ~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~-HpnIV~l~g~~~~~~~~~lV~Ey~~~GsL~ 433 (584)
.+.||+....+ ..+.||+...... .....+.+|...+..++ |--+.+++++..+++..++|||++++.++.
T Consensus 27 ~~~v~rv~~~~-------~~~vlk~~~~~~~-~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~G~~~~ 98 (263)
T d1j7la_ 27 PAKVYKLVGEN-------ENLYLKMTDSRYK-GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCS 98 (263)
T ss_dssp SSEEEEEECSS-------CEEEEEEECGGGT-TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHH
T ss_pred CCcEEEEEeCC-------CeEEEEEcCCCcc-cchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEeccccccc
Confidence 46899886433 4677887765322 22256789999988774 434677888888888999999999998875
Q ss_pred HH
Q 007935 434 AA 435 (584)
Q Consensus 434 ~~ 435 (584)
+.
T Consensus 99 ~~ 100 (263)
T d1j7la_ 99 EE 100 (263)
T ss_dssp HH
T ss_pred cc
Confidence 43
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=83.07 E-value=0.81 Score=43.58 Aligned_cols=77 Identities=8% Similarity=0.096 Sum_probs=49.6
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCC-----C-cchhhHhHHHHHHHHHhc-CC--CceeeeeEEEEeCC
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-----D-ATWRFKDFESEVEAIARV-QH--PNIVRLKAFYYAND 418 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~-----~-~~~~~~~f~~Ei~~l~~l-~H--pnIV~l~g~~~~~~ 418 (584)
+.||.|....||++...+++ +.|.||.-... . .....++..+|.+.|+.+ .+ ..+.+++++ +++
T Consensus 32 ~eig~G~~N~vfrV~~~~~~-----~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~ 104 (392)
T d2pula1 32 QEIGDGNLNYVFHIYDQEHD-----RALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTE 104 (392)
T ss_dssp EECCSSSSEEEEEEEC---------CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETT
T ss_pred EEeCCCceEeEEEEEeCCCC-----eEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCC
Confidence 45899999999999877654 67889975421 1 111234566788888776 33 345555543 566
Q ss_pred ceeEeeecccCCc
Q 007935 419 EKLLISDFIRNGS 431 (584)
Q Consensus 419 ~~~lV~Ey~~~Gs 431 (584)
..++||||+++..
T Consensus 105 ~~~lvmE~L~~~~ 117 (392)
T d2pula1 105 MAVTVMEDLSHLK 117 (392)
T ss_dssp TTEEEECCCTTSE
T ss_pred CCEEEEeccCCcc
Confidence 7789999998754
|