Citrus Sinensis ID: 007936

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580----
MSQSLHFFTPSSNISLPKHHSSLFTPSLTTSNRPFAVTTKQRFFTIKSNASSSSSDPKVLTTDNGTAEILSRVSQTPASSTDSSSIEVDSVTEAELKENGFRSTRRTKLVCTIGPATCGFEQLEALAVGGMNVARINMCHGTREWHRRVIERVRRLNEEKGFAVAIMMDTEGSEIHMGDLSGPPSARAEDGEIWTFTVRAFDSPRPERTITVNYDGFAEDVKVGDELLVDGGMVRFEVIEKIGPDVKCRCTDPGLLLPRANLTFWRDGSLVRERNAMLPTISPKDWLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILASDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSLRIEKWWREEKRHEAMELPDVGSSFAESISEEICNSAAKMANNLEVDALFVYTKTGHMASLLSRCRPDCPIFAFTSTTSVRRRLNLRWGLIPFRLSFSDDMESNLNRTFSLLKARGMIKSGDLVIAVSDVLQSIQVMNVP
cccccccccccccccccccccccccccccccccccccccccccEEEEEccccccccccEEEccccHHHHHcccccccccccccccccccHHHHHHHHHcccccccccEEEEEcccccccHHHHHHHHHHcccEEEcccccccHHHHHHHHHHHHHHHHHccccEEEEEcccccEEEEEEccccccEEEEcccEEEEEEccccccccccEEEEEccccccccccccEEEEEccEEEEEEEEEEccEEEEEEEccccccccccccccccccccccccccccccccccHHHHHHHHHccccEEEEEccccHHHHHHHHHHHHHccccccccEEEccccHHHHHcHHHHHHHccEEEEEccccccccccccccHHHHHHHHHHHHccccEEEccccHHHHHccccccccHHHHHHHHHHcccccHHHcccccccccHHHHHHHHHHHHHHHHHcHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHccccEEEEcccccHHHHHHHHccccccEEEEcccHHHHHHHccccccEEEEEcccccHHHHHHHHHHHHHHccccccccEEEEEccccccccEEEcc
ccccEEEEccccccccccccccccccccccccccccccccccHHccccccccccccccEEEccccccHHHEHccccHHHHccccccHHHHHHHccccccccHcccccEEEEEccHHHccHHHHHHHHHHcEEEEEEEcccccHHHHHHHHHHHHHHHHHHccccEEEEEccccccEEccEcccEEEEccccEEEEEccHHHHccEcccEEEEccccHHHHcccccEEEEccccEEEEEEEEcccEEEEEEEcccEEcccccEccccccccccccccccccccHHcHHHHHHHHcccccEEEEHHHccHHHHHHHHHHHHHccHHcccEEEEEEccHHHHHcHHHHHHHccEEEEcHHHHHHHccHHHHHHHHHHHHHHHHHHcccEEEcccccHHHHccccccHHHHHHHHHHHHHcccEEEEcHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHccccEEEEEccccHHHHHHHHccccccEEEEcccHHHHHHHHHHcccccEEcccHccHHHHHHHHHHHHHHccccccccEEEEEEcccccccccccc
msqslhfftpssnislpkhhsslftpslttsnrpfavttkQRFFtiksnasssssdpkvlttdngtAEILSrvsqtpasstdsssievdsvTEAELkengfrstrrTKLVctigpatcgfEQLEALAVGGMNVARINMCHGTREWHRRVIERVRRLNEEKGFAVAIMMDtegseihmgdlsgppsaraedgeiwTFTVrafdsprpertitvnydgfaedvkvGDELLVDGGMVRFEVIEKigpdvkcrctdpglllpranltfwrdgslvrernamlptispkdwldidfgitegVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILAsdgamvargdlgaqipleqvPSAQQKIVQLCRQLNKPVIVASQLLESmieyptptraevADVSEAVRQRADALMLSgesamgqfpdkALTVLRSVSLRIEKWWREEKRheamelpdvgssFAESISEEICNSAAKMANNLEVDALFVYTKtghmasllsrcrpdcpifaftsTTSVRRRLNLRwglipfrlsfsddmESNLNRTFSLLKARGMIKSGDLVIAVSDVLQSIQVMNVP
MSQSLHFFtpssnislpkhHSSLFTPSLTTSNRPFAVTTKQRFFtiksnasssssdpkvlTTDNGTAEILSrvsqtpasstdsssievdsvteaelkengfrstrrtklVCTIGPATCGFEQLEALAVGGMNVARINMCHGTREWHRRVIERVRRLNEEKGFAVAIMMDTEGSEIHMGDLSGPPSARAEDGEIWTFtvrafdsprpertitvnydgfaedVKVGDELLVDGGMVRFEVIekigpdvkcrctdpglllpranltfwrdgslvrERNAMlptispkdwldIDFGITEGVDFIAISFVKSAEVINHLKSYIaarsrdsdIAVIAKIESIDSLKNLEEIILASDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSgesamgqfpdkalTVLRSVSLRIEKWWreekrheamelpdvgssFAESISEEICNSAAKMANNLEVDALFVYTKTGHMASLLSRCRPDCPIFaftsttsvrrrLNLRWGLIPFrlsfsddmesNLNRTFSLLKARGMIKSGDLVIAVSDVlqsiqvmnvp
MSQSLHFFTPSSNISLPKHHSSLFTPSLTTSNRPFAVTTKQRFFTIKSNAsssssDPKVLTTDNGTAEILSRVsqtpasstdsssievdsvteAELKENGFRSTRRTKLVCTIGPATCGFEQLEALAVGGMNVARINMCHGTREWHRRVIERVRRLNEEKGFAVAIMMDTEGSEIHMGDLSGPPSARAEDGEIWTFTVRAFDSPRPERTITVNYDGFAEDVKVGDELLVDGGMVRFEVIEKIGPDVKCRCTDPGLLLPRANLTFWRDGSLVRERNAMLPTISPKDWLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILASDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSLRIEKWWREEKRHEAMELPDVGSSFAESISEEICNSAAKMANNLEVDALFVYTKTGHMASLLSRCRPDCPIFAFTSTTSVRRRLNLRWGLIPFRLSFSDDMESNLNRTFSLLKARGMIKSGDLVIAVSDVLQSIQVMNVP
******************************************FF************************************************************RRTKLVCTIGPATCGFEQLEALAVGGMNVARINMCHGTREWHRRVIERVRRLNEEKGFAVAIMMD**********************EIWTFTVRAFDSPRPERTITVNYDGFAEDVKVGDELLVDGGMVRFEVIEKIGPDVKCRCTDPGLLLPRANLTFWRDGSLVRERNAMLPTISPKDWLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILASDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPT******************************FPDKALTVLRSVSLRIEKWWRE***********************ICNSAAKMANNLEVDALFVY************CRPDCPIFAFTSTTSVRRRLNLRWGLIPFRLSFSDDMESNLNRTFSLLKARGMIKSGDLVIAVSDVLQSIQV****
****************************************************************************************DSVTE*********STRRTKLVCTIGPATCGFEQLEALAVGGMNVARINMCHGTREWHRRVIERVRRLNEEKGFAVAIMMDTEGSEIHMGDLSGPPSARAEDGEIWTFTVRAFDSPRPERTITVNYDGFAEDVKVGDELLVDGGMVRFEVIEKIGPDVKCRCTDPGLLLPRANLTFWRDGSLVRERNAMLPTISPKDWLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILASDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSLRIEKWWREEKRHEA*************ISEEICNSAAKMANNLEVDALFVYTKTGHMASLLSRCRPDCPIFAFTSTTSVRRRLNLRWGLIPFRLSFSDDMESNLNRTFSLLKARGMIKSGDLVIAVSDVLQSIQ*M***
********TPSSNISLPKHHSSLFTPSLTTSNRPFAVTTKQRFFTIK**************TDNGTAEILS******************SVTEAELKENGFRSTRRTKLVCTIGPATCGFEQLEALAVGGMNVARINMCHGTREWHRRVIERVRRLNEEKGFAVAIMMDTEGSEIHMGDLSGPPSARAEDGEIWTFTVRAFDSPRPERTITVNYDGFAEDVKVGDELLVDGGMVRFEVIEKIGPDVKCRCTDPGLLLPRANLTFWRDGSLVRERNAMLPTISPKDWLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILASDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSLRIEKWWREEKRHEAMELPDVGSSFAESISEEICNSAAKMANNLEVDALFVYTKTGHMASLLSRCRPDCPIFAFTSTTSVRRRLNLRWGLIPFRLSFSDDMESNLNRTFSLLKARGMIKSGDLVIAVSDVLQSIQVMNVP
****LHF*TPSSNISLPKHHSSLFTP*******************************KVLT**NGTAEILSRVSQTPASSTDSSSIEVDSVTEAELKENGFRSTRRTKLVCTIGPATCGFEQLEALAVGGMNVARINMCHGTREWHRRVIERVRRLNEEKGFAVAIMMDTEGSEIHMGDLSGPPSARAEDGEIWTFTVRAFDSPRPERTITVNYDGFAEDVKVGDELLVDGGMVRFEVIEKIGPDVKCRCTDPGLLLPRANLTFWRDGSLVRERNAMLPTISPKDWLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILASDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSLRIEKWWREEKRHEAMELPDVGSSFAESISEEICNSAAKMANNLEVDALFVYTKTGHMASLLSRCRPDCPIFAFTSTTSVRRRLNLRWGLIPFRLSFSDDMESNLNRTFSLLKARGMIKSGDLVIAVSDVLQSIQ*****
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSQSLHFFTPSSNISLPKHHSSLFTPSLTTSNRPFAVTTKQRFFTIKSNASSSSSDPKVLTTDNGTAEILSRVSQTPASSTDSSSIEVDSVTEAELKENGFRSTRRTKLVCTIGPATCGFEQLEALAVGGMNVARINMCHGTREWHRRVIERVRRLNEEKGFAVAIMMDTEGSEIHMGDLSGPPSARAEDGEIWTFTVRAFDSPRPERTITVNYDGFAEDVKVGDELLVDGGMVRFEVIEKIGPDVKCRCTDPGLLLPRANLTFWRDGSLVRERNAMLPTISPKDWLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILASDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSLRIEKWWREEKRHEAMELPDVGSSFAESISEEICNSAAKMANNLEVDALFVYTKTGHMASLLSRCRPDCPIFAFTSTTSVRRRLNLRWGLIPFRLSFSDDMESNLNRTFSLLKARGMIKSGDLVIAVSDVLQSIQVMNVP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query584 2.2.26 [Sep-21-2011]
Q43117583 Pyruvate kinase isozyme A N/A no 0.994 0.996 0.844 0.0
Q40545593 Pyruvate kinase isozyme A N/A no 0.996 0.981 0.810 0.0
Q9LIK0596 Plastidial pyruvate kinas yes no 0.994 0.974 0.799 0.0
Q9FLW9579 Plastidial pyruvate kinas no no 0.777 0.784 0.455 1e-110
Q40546562 Pyruvate kinase isozyme G N/A no 0.785 0.816 0.444 1e-109
Q93Z53571 Plastidial pyruvate kinas no no 0.773 0.791 0.461 1e-106
P55964418 Pyruvate kinase isozyme G N/A no 0.674 0.942 0.443 5e-85
Q02499 587 Pyruvate kinase OS=Geobac N/A no 0.770 0.766 0.361 9e-76
Q54RF5507 Pyruvate kinase OS=Dictyo yes no 0.780 0.899 0.351 3e-74
P51182 586 Pyruvate kinase OS=Bacill N/A no 0.758 0.755 0.351 4e-74
>sp|Q43117|KPYA_RICCO Pyruvate kinase isozyme A, chloroplastic OS=Ricinus communis PE=1 SV=1 Back     alignment and function desciption
 Score = 1006 bits (2602), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 495/586 (84%), Positives = 525/586 (89%), Gaps = 5/586 (0%)

Query: 1   MSQSLHFFTPSSNISLPKHHSSLFTPSLTTSNRPFAVTTKQRFFTIKSNASSSSSDPKVL 60
           MSQSLHF   S N++  K           TSN  + V   +      S + SSSSDP+VL
Sbjct: 1   MSQSLHF---SPNLTFAKQPFPKLPLPFPTSNSRYPVNNYKSLSIKASTSPSSSSDPQVL 57

Query: 61  TTDNGTAE--ILSRVSQTPASSTDSSSIEVDSVTEAELKENGFRSTRRTKLVCTIGPATC 118
             DNGT    +L   +    + +D SSIEVD+VTE ELKENGFRSTRRTKLVCTIGPATC
Sbjct: 58  VADNGTGNSGVLYNNNNKSVTVSDPSSIEVDAVTETELKENGFRSTRRTKLVCTIGPATC 117

Query: 119 GFEQLEALAVGGMNVARINMCHGTREWHRRVIERVRRLNEEKGFAVAIMMDTEGSEIHMG 178
           GFE+LEALAVGGMNVARINMCHGTREWH+ VIERVRRLNEEKGFAVAIMMDTEGSEIHMG
Sbjct: 118 GFEELEALAVGGMNVARINMCHGTREWHKSVIERVRRLNEEKGFAVAIMMDTEGSEIHMG 177

Query: 179 DLSGPPSARAEDGEIWTFTVRAFDSPRPERTITVNYDGFAEDVKVGDELLVDGGMVRFEV 238
           DL G  SA+AEDGEIWTF+VRA+DSPRPERTI VNYDGFAEDVKVGDELLVDGGMVRFEV
Sbjct: 178 DLGGASSAKAEDGEIWTFSVRAYDSPRPERTINVNYDGFAEDVKVGDELLVDGGMVRFEV 237

Query: 239 IEKIGPDVKCRCTDPGLLLPRANLTFWRDGSLVRERNAMLPTISPKDWLDIDFGITEGVD 298
           IEKIGPDVKCRCTDPGLLLPRANLTFWRDGSLVRERNAMLPTIS KDWLDIDFGI EGVD
Sbjct: 238 IEKIGPDVKCRCTDPGLLLPRANLTFWRDGSLVRERNAMLPTISSKDWLDIDFGIAEGVD 297

Query: 299 FIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILASDGAMVARGD 358
           FIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEII ASDGAMVARGD
Sbjct: 298 FIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIIRASDGAMVARGD 357

Query: 359 LGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRA 418
           LGAQIPLEQVPSAQQ IVQ+CRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRA
Sbjct: 358 LGAQIPLEQVPSAQQNIVQVCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRA 417

Query: 419 DALMLSGESAMGQFPDKALTVLRSVSLRIEKWWREEKRHEAMELPDVGSSFAESISEEIC 478
           DALMLSGESAMGQ+P+KAL VLRSVS+RIEKWWREEK HEAMELP +GS++++SISEEIC
Sbjct: 418 DALMLSGESAMGQYPEKALAVLRSVSVRIEKWWREEKHHEAMELPAIGSTYSDSISEEIC 477

Query: 479 NSAAKMANNLEVDALFVYTKTGHMASLLSRCRPDCPIFAFTSTTSVRRRLNLRWGLIPFR 538
           NSAAKMANNL VDALFVYTK GHMASLLSRCRPDCPIFAFT+TTSVRRRLNL+WGLIPFR
Sbjct: 478 NSAAKMANNLGVDALFVYTKDGHMASLLSRCRPDCPIFAFTTTTSVRRRLNLQWGLIPFR 537

Query: 539 LSFSDDMESNLNRTFSLLKARGMIKSGDLVIAVSDVLQSIQVMNVP 584
           LSF+DDMESNLN+TFSLLKARGMIKSGDLVIAVSD+LQSIQVMNVP
Sbjct: 538 LSFADDMESNLNKTFSLLKARGMIKSGDLVIAVSDMLQSIQVMNVP 583

Ricinus communis (taxid: 3988)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 4EC: 0
>sp|Q40545|KPYA_TOBAC Pyruvate kinase isozyme A, chloroplastic OS=Nicotiana tabacum PE=2 SV=1 Back     alignment and function description
>sp|Q9LIK0|PKP1_ARATH Plastidial pyruvate kinase 1, chloroplastic OS=Arabidopsis thaliana GN=PKP1 PE=1 SV=1 Back     alignment and function description
>sp|Q9FLW9|PKP2_ARATH Plastidial pyruvate kinase 2 OS=Arabidopsis thaliana GN=PKP2 PE=1 SV=1 Back     alignment and function description
>sp|Q40546|KPYG_TOBAC Pyruvate kinase isozyme G, chloroplastic OS=Nicotiana tabacum PE=2 SV=1 Back     alignment and function description
>sp|Q93Z53|PKP3_ARATH Plastidial pyruvate kinase 3, chloroplastic OS=Arabidopsis thaliana GN=PKP3 PE=1 SV=1 Back     alignment and function description
>sp|P55964|KPYG_RICCO Pyruvate kinase isozyme G, chloroplastic (Fragment) OS=Ricinus communis PE=2 SV=1 Back     alignment and function description
>sp|Q02499|KPYK_GEOSE Pyruvate kinase OS=Geobacillus stearothermophilus GN=pyk PE=1 SV=2 Back     alignment and function description
>sp|Q54RF5|KPYK_DICDI Pyruvate kinase OS=Dictyostelium discoideum GN=pyk PE=1 SV=1 Back     alignment and function description
>sp|P51182|KPYK_BACPY Pyruvate kinase OS=Bacillus psychrophilus GN=pyk PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query584
225432854586 PREDICTED: pyruvate kinase isozyme A, ch 0.996 0.993 0.855 0.0
224099863591 predicted protein [Populus trichocarpa] 0.989 0.978 0.855 0.0
255551999583 pyruvate kinase, putative [Ricinus commu 0.994 0.996 0.844 0.0
359477582585 PREDICTED: pyruvate kinase isozyme A, ch 0.994 0.993 0.852 0.0
224111090590 predicted protein [Populus trichocarpa] 0.989 0.979 0.847 0.0
2497541593 RecName: Full=Pyruvate kinase isozyme A, 0.996 0.981 0.810 0.0
449520988591 PREDICTED: LOW QUALITY PROTEIN: pyruvate 0.998 0.986 0.817 0.0
449465697591 PREDICTED: pyruvate kinase isozyme A, ch 0.998 0.986 0.817 0.0
298364437579 pyruvate kinase [Camellia oleifera] 0.859 0.867 0.918 0.0
356574787655 PREDICTED: pyruvate kinase isozyme A, ch 0.897 0.8 0.875 0.0
>gi|225432854|ref|XP_002279975.1| PREDICTED: pyruvate kinase isozyme A, chloroplastic isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
 Score = 1014 bits (2623), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 503/588 (85%), Positives = 529/588 (89%), Gaps = 6/588 (1%)

Query: 1   MSQSLHFFTPSS---NISLPKHHSSLFTPSLTTSNRPFAVTTKQRFFTIKSNASSSSSDP 57
           MSQSLHF   SS   N++LP H     +P    SN  F VT  +R  +  S+   S+S  
Sbjct: 1   MSQSLHFVVSSSRSPNLTLPNHSYLKLSP--PPSNLRFPVTFARRPISASSSDLDSNSPS 58

Query: 58  KVLTTDNGTAEILSRVS-QTPASSTDSSSIEVDSVTEAELKENGFRSTRRTKLVCTIGPA 116
           KVL +DNG   +L   S +     +DSSSI+VD+VTE +LKENGFRSTRRTKLVCTIGPA
Sbjct: 59  KVLVSDNGKGGVLPATSPEYVPPPSDSSSIDVDAVTETDLKENGFRSTRRTKLVCTIGPA 118

Query: 117 TCGFEQLEALAVGGMNVARINMCHGTREWHRRVIERVRRLNEEKGFAVAIMMDTEGSEIH 176
           TCGFEQLEALAVGGMNVARINMCHGTREWHRRVIERVRRLNEEKGFAVAIMMDTEGSEIH
Sbjct: 119 TCGFEQLEALAVGGMNVARINMCHGTREWHRRVIERVRRLNEEKGFAVAIMMDTEGSEIH 178

Query: 177 MGDLSGPPSARAEDGEIWTFTVRAFDSPRPERTITVNYDGFAEDVKVGDELLVDGGMVRF 236
           MG+L G PSA+AEDGEIWTF+VRAFDSPRPERTI VNYDGFAEDVKVGDELLVDGGMVRF
Sbjct: 179 MGELGGAPSAKAEDGEIWTFSVRAFDSPRPERTINVNYDGFAEDVKVGDELLVDGGMVRF 238

Query: 237 EVIEKIGPDVKCRCTDPGLLLPRANLTFWRDGSLVRERNAMLPTISPKDWLDIDFGITEG 296
           +VIEKIGPDVKCRCTDPGLLLPRANLTFWRDGSLVRERNAMLPTIS KDWLDIDFGI EG
Sbjct: 239 DVIEKIGPDVKCRCTDPGLLLPRANLTFWRDGSLVRERNAMLPTISSKDWLDIDFGIAEG 298

Query: 297 VDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILASDGAMVAR 356
           VDFIAISFVKSAEVI HLKSYIAARSRDSDIAVIAKIESIDSLKNLEEII ASDGAMVAR
Sbjct: 299 VDFIAISFVKSAEVIKHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIIQASDGAMVAR 358

Query: 357 GDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQ 416
           GDLGAQIPLEQVPSAQQ+IVQ CR LNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQ
Sbjct: 359 GDLGAQIPLEQVPSAQQRIVQQCRHLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQ 418

Query: 417 RADALMLSGESAMGQFPDKALTVLRSVSLRIEKWWREEKRHEAMELPDVGSSFAESISEE 476
           RADALMLSGESAMG FP+KAL VLRSVS+RIEKWWREEKRHEAMELPD  SSF++SISE+
Sbjct: 419 RADALMLSGESAMGLFPEKALAVLRSVSVRIEKWWREEKRHEAMELPDTASSFSDSISEQ 478

Query: 477 ICNSAAKMANNLEVDALFVYTKTGHMASLLSRCRPDCPIFAFTSTTSVRRRLNLRWGLIP 536
           ICNSAAKMANNL VDALFVYTKTGHMASLLSRCRPDCPIFAFTST SVRRRLNL+WGLIP
Sbjct: 479 ICNSAAKMANNLAVDALFVYTKTGHMASLLSRCRPDCPIFAFTSTISVRRRLNLQWGLIP 538

Query: 537 FRLSFSDDMESNLNRTFSLLKARGMIKSGDLVIAVSDVLQSIQVMNVP 584
           FRLSFSDDMESNLNRTFSLLKARGMIKSGDLVIAVSD+LQSIQVMNVP
Sbjct: 539 FRLSFSDDMESNLNRTFSLLKARGMIKSGDLVIAVSDMLQSIQVMNVP 586

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224099863|ref|XP_002311649.1| predicted protein [Populus trichocarpa] gi|222851469|gb|EEE89016.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255551999|ref|XP_002517044.1| pyruvate kinase, putative [Ricinus communis] gi|2497539|sp|Q43117.1|KPYA_RICCO RecName: Full=Pyruvate kinase isozyme A, chloroplastic; Flags: Precursor gi|169703|gb|AAA33870.1| ATP:pyruvate phosphotransferase [Ricinus communis] gi|223543679|gb|EEF45207.1| pyruvate kinase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|359477582|ref|XP_003631998.1| PREDICTED: pyruvate kinase isozyme A, chloroplastic isoform 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224111090|ref|XP_002315744.1| predicted protein [Populus trichocarpa] gi|222864784|gb|EEF01915.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|2497541|sp|Q40545.1|KPYA_TOBAC RecName: Full=Pyruvate kinase isozyme A, chloroplastic; Flags: Precursor gi|482936|emb|CAA82222.1| pyruvate kinase; plastid isozyme [Nicotiana tabacum] Back     alignment and taxonomy information
>gi|449520988|ref|XP_004167514.1| PREDICTED: LOW QUALITY PROTEIN: pyruvate kinase isozyme A, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449465697|ref|XP_004150564.1| PREDICTED: pyruvate kinase isozyme A, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|298364437|gb|ADI79344.1| pyruvate kinase [Camellia oleifera] Back     alignment and taxonomy information
>gi|356574787|ref|XP_003555526.1| PREDICTED: pyruvate kinase isozyme A, chloroplastic-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query584
TAIR|locus:2084583596 PKP-ALPHA [Arabidopsis thalian 0.994 0.974 0.777 6.5e-241
TAIR|locus:2176912579 PKP-BETA1 "plastidic pyruvate 0.777 0.784 0.455 6.4e-99
TAIR|locus:2033760571 PKp3 "plastidial pyruvate kina 0.792 0.810 0.454 6.6e-97
TIGR_CMR|CHY_1144 583 CHY_1144 "pyruvate kinase" [Ca 0.775 0.777 0.378 6.3e-76
TIGR_CMR|BA_4843 585 BA_4843 "pyruvate kinase" [Bac 0.772 0.770 0.367 9.6e-73
DICTYBASE|DDB_G0283247507 pyk "pyruvate kinase" [Dictyos 0.789 0.909 0.357 4.3e-70
TIGR_CMR|GSU_3331480 GSU_3331 "pyruvate kinase" [Ge 0.768 0.935 0.355 2.7e-68
UNIPROTKB|Q9KUN0470 VC_0485 "Pyruvate kinase" [Vib 0.779 0.968 0.343 6.5e-67
TIGR_CMR|VC_0485470 VC_0485 "pyruvate kinase I" [V 0.779 0.968 0.343 6.5e-67
ZFIN|ZDB-GENE-040801-230605 pkmb "pyruvate kinase, muscle, 0.780 0.753 0.342 1.3e-66
TAIR|locus:2084583 PKP-ALPHA [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2322 (822.4 bits), Expect = 6.5e-241, P = 6.5e-241
 Identities = 466/599 (77%), Positives = 510/599 (85%)

Query:     1 MSQSLHFFTPSSN---ISLPKHHSSLFTPSLTTSNRPFAVTTKQRFFTIKSNAXXX---- 53
             MSQS+ F TPS     + LP  HS    P  + S R F +TT  ++ +I++++       
Sbjct:     1 MSQSIQFSTPSHTPHLLHLP--HSQFNRPLSSISFRRFPLTTI-KYTSIRASSSSSPSPD 57

Query:    54 ------XXDPKVLTTDNGTAEILS--RVXXXXXXXXXXXXXXXXXXXXAELKENGFRSTR 105
                       +VL + NGT  + S  R                     AELKENGFRSTR
Sbjct:    58 LDSSSSSSSSQVLLSPNGTGAVKSDERSVVATAVTTDTSGIEVDTVTEAELKENGFRSTR 117

Query:   106 RTKLVCTIGPATCGFEQLEALAVGGMNVARINMCHGTREWHRRVIERVRRLNEEKGFAVA 165
             RTKL+CTIGPATCGFEQLEALAVGGMNVAR+NMCHGTR+WHR VI  VRRLNEEKGFAVA
Sbjct:   118 RTKLICTIGPATCGFEQLEALAVGGMNVARLNMCHGTRDWHRGVIRSVRRLNEEKGFAVA 177

Query:   166 IMMDTEGSEIHMGDLSGPPSARAEDGEIWTFTVRAFDSPRPERTITVNYDGFAEDVKVGD 225
             IMMDTEGSEIHMGDL G  SA+AEDGE+WTFTVRAFDS RPERTI+V+YDGFAEDV+VGD
Sbjct:   178 IMMDTEGSEIHMGDLGGEASAKAEDGEVWTFTVRAFDSSRPERTISVSYDGFAEDVRVGD 237

Query:   226 ELLVDGGMVRFEVIEKIGPDVKCRCTDPGLLLPRANLTFWRDGSLVRERNAMLPTISPKD 285
             ELLVDGGMVRFEVIEKIGPDVKC CTDPGLLLPRANLTFWRDGSLVRERNAMLPTIS KD
Sbjct:   238 ELLVDGGMVRFEVIEKIGPDVKCLCTDPGLLLPRANLTFWRDGSLVRERNAMLPTISSKD 297

Query:   286 WLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEI 345
             WLDIDFGI EGVDFIA+SFVKSAEVINHLKSY+AARSR  +I VIAKIESIDSL NLEEI
Sbjct:   298 WLDIDFGIAEGVDFIAVSFVKSAEVINHLKSYLAARSRGGEIGVIAKIESIDSLTNLEEI 357

Query:   346 ILASDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRA 405
             ILASDGAMVARGDLGAQIPLEQVP+AQQ+IVQ+CR LNKPVIVASQLLESMIEYPTPTRA
Sbjct:   358 ILASDGAMVARGDLGAQIPLEQVPAAQQRIVQVCRALNKPVIVASQLLESMIEYPTPTRA 417

Query:   406 EVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSLRIEKWWREEKRHEAMELPDV 465
             EVADVSEAVRQR+DALMLSGESAMGQFPDKALTVLR+VSLRIE+WWREEKRHE++ L  +
Sbjct:   418 EVADVSEAVRQRSDALMLSGESAMGQFPDKALTVLRTVSLRIERWWREEKRHESVPLQAI 477

Query:   466 GSSFAESISEEICNSAAKMANNLEVDALFVYTKTGHMASLLSRCRPDCPIFAFTSTTSVR 525
             GSSF++ ISEEICNSAAKMANNL VDA+FVYT +GHMASL+SRCRPDCPIFAFT+TTSVR
Sbjct:   478 GSSFSDKISEEICNSAAKMANNLGVDAVFVYTTSGHMASLVSRCRPDCPIFAFTTTTSVR 537

Query:   526 RRLNLRWGLIPFRLSFSDDMESNLNRTFSLLKARGMIKSGDLVIAVSDVLQSIQVMNVP 584
             RRLNL+WGLIPFRLSFSDDMESNLN+TFSLLK+RGMIKSGDLVIAVSD+LQSIQVMNVP
Sbjct:   538 RRLNLQWGLIPFRLSFSDDMESNLNKTFSLLKSRGMIKSGDLVIAVSDMLQSIQVMNVP 596
GO:0000287 "magnesium ion binding" evidence=IEA;IDA
GO:0003824 "catalytic activity" evidence=IEA
GO:0004743 "pyruvate kinase activity" evidence=IEA;ISS;IDA
GO:0006096 "glycolysis" evidence=IEA;ISS
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0030955 "potassium ion binding" evidence=IEA;IDA
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0046686 "response to cadmium ion" evidence=IEP
GO:0010431 "seed maturation" evidence=IMP
GO:0006629 "lipid metabolic process" evidence=IGI
GO:0005829 "cytosol" evidence=RCA
GO:0009832 "plant-type cell wall biogenesis" evidence=RCA
GO:0016049 "cell growth" evidence=RCA
GO:0016126 "sterol biosynthetic process" evidence=RCA
GO:0030243 "cellulose metabolic process" evidence=RCA
TAIR|locus:2176912 PKP-BETA1 "plastidic pyruvate kinase beta subunit 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2033760 PKp3 "plastidial pyruvate kinase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_1144 CHY_1144 "pyruvate kinase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
TIGR_CMR|BA_4843 BA_4843 "pyruvate kinase" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0283247 pyk "pyruvate kinase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_3331 GSU_3331 "pyruvate kinase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KUN0 VC_0485 "Pyruvate kinase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|VC_0485 VC_0485 "pyruvate kinase I" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040801-230 pkmb "pyruvate kinase, muscle, b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9LIK0PKP1_ARATH2, ., 7, ., 1, ., 4, 00.79960.99480.9748yesno
Q40545KPYA_TOBAC2, ., 7, ., 1, ., 4, 00.81000.99650.9814N/Ano
Q43117KPYA_RICCO2, ., 7, ., 1, ., 4, 00.84470.99480.9965N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer2.7.1.400.994
3rd Layer2.7.10.998

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00020102001
RecName- Full=Pyruvate kinase; EC=2.7.1.40; (586 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00038473001
RecName- Full=Enolase; EC=4.2.1.11; (440 aa)
     •• 0.925
GPEPC
RecName- Full=Phosphoenolpyruvate carboxylase; EC=4.1.1.31; (965 aa)
     •• 0.925
GSVIVG00009618001
RecName- Full=L-lactate dehydrogenase; EC=1.1.1.27; (350 aa)
     •• 0.923
Ndpk
RecName- Full=Nucleoside diphosphate kinase; EC=2.7.4.6; (148 aa)
     •• 0.919
GSVIVG00024180001
RecName- Full=Enolase; EC=4.2.1.11; (435 aa)
     •• 0.917
NADP-ME
RecName- Full=Malic enzyme; (496 aa)
     •• 0.915
GSVIVG00035062001
SubName- Full=Chromosome chr1 scaffold_75, whole genome shotgun sequence; (221 aa)
     •• 0.914
GSVIVG00026376001
hypothetical protein LOC100248878 (320 aa)
     •• 0.914
GSVIVG00017586001
RecName- Full=Enolase; EC=4.2.1.11; (458 aa)
     •• 0.910
GSVIVG00017909001
SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (245 aa)
     •• 0.910

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query584
PLN02762509 PLN02762, PLN02762, pyruvate kinase complex alpha 0.0
PLN02623581 PLN02623, PLN02623, pyruvate kinase 1e-149
COG0469477 COG0469, PykF, Pyruvate kinase [Carbohydrate trans 1e-147
PRK05826465 PRK05826, PRK05826, pyruvate kinase; Provisional 1e-144
TIGR01064473 TIGR01064, pyruv_kin, pyruvate kinase 1e-141
cd00288480 cd00288, Pyruvate_Kinase, Pyruvate kinase (PK): La 1e-127
PRK06247476 PRK06247, PRK06247, pyruvate kinase; Provisional 1e-112
PRK06354 590 PRK06354, PRK06354, pyruvate kinase; Provisional 1e-105
pfam00224348 pfam00224, PK, Pyruvate kinase, barrel domain 1e-100
PRK09206470 PRK09206, PRK09206, pyruvate kinase; Provisional 7e-98
PTZ00066513 PTZ00066, PTZ00066, pyruvate kinase; Provisional 1e-90
PLN02461511 PLN02461, PLN02461, Probable pyruvate kinase 6e-88
PTZ00300454 PTZ00300, PTZ00300, pyruvate kinase; Provisional 9e-76
PRK06739352 PRK06739, PRK06739, pyruvate kinase; Validated 2e-66
PLN02765526 PLN02765, PLN02765, pyruvate kinase 2e-60
PRK08187493 PRK08187, PRK08187, pyruvate kinase; Validated 2e-39
PRK14725608 PRK14725, PRK14725, pyruvate kinase; Provisional 2e-25
pfam02887117 pfam02887, PK_C, Pyruvate kinase, alpha/beta domai 8e-25
PRK14725608 PRK14725, PRK14725, pyruvate kinase; Provisional 2e-07
pfam03328221 pfam03328, HpcH_HpaI, HpcH/HpaI aldolase/citrate l 0.004
>gnl|CDD|215407 PLN02762, PLN02762, pyruvate kinase complex alpha subunit Back     alignment and domain information 
 Score = 1047 bits (2708), Expect = 0.0
 Identities = 446/509 (87%), Positives = 472/509 (92%), Gaps = 5/509 (0%)

Query: 81  TDSSSIEVDSVTEAELKENGFRSTRRTKLVCTIGPATCGFEQLEALAVGGMNVARINMCH 140
           +DSS I+VD VTEAEL+ENGFRSTRRTKLVCTIGPA CGFEQLEALA+GGMNVAR+NMCH
Sbjct: 1   SDSSGIDVDVVTEAELRENGFRSTRRTKLVCTIGPACCGFEQLEALAMGGMNVARLNMCH 60

Query: 141 GTREWHRRVIERVRRLNEEKGFAVAIMMDTEGSEIHMGDLSGPPSARAEDGEIWTFTVRA 200
           GTREWHR VI RVRRLNEEKGFAVA+MMDTEGSEIHMGDL G  SA+AEDGE WTFTVR 
Sbjct: 61  GTREWHRDVIRRVRRLNEEKGFAVAVMMDTEGSEIHMGDLGGASSAKAEDGEEWTFTVRK 120

Query: 201 FDSPRPERTITVNYDGFAEDVKVGDELLVDGGMVRFEVIEKIGPDVKCRCTDPGLLLPRA 260
           FD  RPE TI VNYDGFAEDVKVGDEL+VDGGMVRFEVIEKIGPDVKC+CTDPGLLLPRA
Sbjct: 121 FDGSRPEFTIQVNYDGFAEDVKVGDELVVDGGMVRFEVIEKIGPDVKCKCTDPGLLLPRA 180

Query: 261 NLTFWRDGSLVRERNAMLPTISPKDWLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAA 320
           NLTFWRDGSLVRERNAMLPTIS KDWLDIDFGI+EGVDFIA+SFVKSAEVI HLKSYIAA
Sbjct: 181 NLTFWRDGSLVRERNAMLPTISSKDWLDIDFGISEGVDFIAVSFVKSAEVIKHLKSYIAA 240

Query: 321 RSRDSDIAVIAKIESIDSLKNLEEIILASDGAMVARGDLGAQIPLEQVPSAQQKIVQLCR 380
           RSRDSDI VIAKIES+DSLKNLEEII ASDGAMVARGDLGAQIPLEQVPS Q+KIV+LCR
Sbjct: 241 RSRDSDIGVIAKIESLDSLKNLEEIIRASDGAMVARGDLGAQIPLEQVPSVQEKIVRLCR 300

Query: 381 QLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVL 440
           QLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMG +P+KAL+VL
Sbjct: 301 QLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGLYPEKALSVL 360

Query: 441 RSVSLRIEKWWREEKRHEAMELPDVGSSFAESISEEICNSAAKMANNLEVDALFVYTKTG 500
           RSVSLR+E W REEKRHEA+ELP + SS ++ ISEEICNSAAKMANNL VDA+FVYTK G
Sbjct: 361 RSVSLRMELWSREEKRHEALELPQLSSSLSDRISEEICNSAAKMANNLGVDAIFVYTKHG 420

Query: 501 HMASLLSRCRPDCPIFAFTSTTSVRRRLNLRWGLIPFRLSFSDDMESNLNRTFSLLKARG 560
           HMASLLSR RPDCPIFAFT TTSVRRRLNL+WGLIPFRL FSDDMESNLN+TFSLLKARG
Sbjct: 421 HMASLLSRNRPDCPIFAFTDTTSVRRRLNLQWGLIPFRLDFSDDMESNLNKTFSLLKARG 480

Query: 561 MIKSGDLVIAVSD-----VLQSIQVMNVP 584
           MIKSGDLVIAVSD     +LQSIQV NVP
Sbjct: 481 MIKSGDLVIAVSDLTPSSMLQSIQVRNVP 509

Length = 509
>gnl|CDD|215334 PLN02623, PLN02623, pyruvate kinase Back     alignment and domain information
>gnl|CDD|223545 COG0469, PykF, Pyruvate kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|235619 PRK05826, PRK05826, pyruvate kinase; Provisional Back     alignment and domain information
>gnl|CDD|233257 TIGR01064, pyruv_kin, pyruvate kinase Back     alignment and domain information
>gnl|CDD|238178 cd00288, Pyruvate_Kinase, Pyruvate kinase (PK): Large allosteric enzyme that regulates glycolysis through binding of the substrate, phosphoenolpyruvate, and one or more allosteric effectors Back     alignment and domain information
>gnl|CDD|180487 PRK06247, PRK06247, pyruvate kinase; Provisional Back     alignment and domain information
>gnl|CDD|235784 PRK06354, PRK06354, pyruvate kinase; Provisional Back     alignment and domain information
>gnl|CDD|215802 pfam00224, PK, Pyruvate kinase, barrel domain Back     alignment and domain information
>gnl|CDD|181699 PRK09206, PRK09206, pyruvate kinase; Provisional Back     alignment and domain information
>gnl|CDD|173361 PTZ00066, PTZ00066, pyruvate kinase; Provisional Back     alignment and domain information
>gnl|CDD|215255 PLN02461, PLN02461, Probable pyruvate kinase Back     alignment and domain information
>gnl|CDD|140321 PTZ00300, PTZ00300, pyruvate kinase; Provisional Back     alignment and domain information
>gnl|CDD|180676 PRK06739, PRK06739, pyruvate kinase; Validated Back     alignment and domain information
>gnl|CDD|215409 PLN02765, PLN02765, pyruvate kinase Back     alignment and domain information
>gnl|CDD|236178 PRK08187, PRK08187, pyruvate kinase; Validated Back     alignment and domain information
>gnl|CDD|237804 PRK14725, PRK14725, pyruvate kinase; Provisional Back     alignment and domain information
>gnl|CDD|217269 pfam02887, PK_C, Pyruvate kinase, alpha/beta domain Back     alignment and domain information
>gnl|CDD|237804 PRK14725, PRK14725, pyruvate kinase; Provisional Back     alignment and domain information
>gnl|CDD|202594 pfam03328, HpcH_HpaI, HpcH/HpaI aldolase/citrate lyase family Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 584
PLN02762509 pyruvate kinase complex alpha subunit 100.0
PTZ00066513 pyruvate kinase; Provisional 100.0
PLN02461511 Probable pyruvate kinase 100.0
PRK09206470 pyruvate kinase; Provisional 100.0
PRK06247476 pyruvate kinase; Provisional 100.0
COG0469477 PykF Pyruvate kinase [Carbohydrate transport and m 100.0
PLN02765526 pyruvate kinase 100.0
PRK06354 590 pyruvate kinase; Provisional 100.0
cd00288480 Pyruvate_Kinase Pyruvate kinase (PK): Large allost 100.0
PRK05826465 pyruvate kinase; Provisional 100.0
PLN02623581 pyruvate kinase 100.0
PTZ00300454 pyruvate kinase; Provisional 100.0
TIGR01064473 pyruv_kin pyruvate kinase. This enzyme is a homote 100.0
KOG2323501 consensus Pyruvate kinase [Carbohydrate transport 100.0
PF00224348 PK: Pyruvate kinase, barrel domain; InterPro: IPR0 100.0
PRK06739352 pyruvate kinase; Validated 100.0
PRK14725608 pyruvate kinase; Provisional 100.0
PRK08187493 pyruvate kinase; Validated 100.0
PF02887117 PK_C: Pyruvate kinase, alpha/beta domain; InterPro 99.94
TIGR03239249 GarL 2-dehydro-3-deoxyglucarate aldolase. In E. co 99.68
PRK10558256 alpha-dehydro-beta-deoxy-D-glucarate aldolase; Pro 99.68
PRK10128267 2-keto-3-deoxy-L-rhamnonate aldolase; Provisional 99.66
COG3836255 HpcH 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldola 99.6
TIGR02311249 HpaI 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldola 99.58
PF03328221 HpcH_HpaI: HpcH/HpaI aldolase/citrate lyase family 99.46
TIGR01418782 PEP_synth phosphoenolpyruvate synthase. Also calle 99.29
PRK06464795 phosphoenolpyruvate synthase; Validated 99.27
TIGR01588288 citE citrate lyase, beta subunit. This is a model 99.17
TIGR01417565 PTS_I_fam phosphoenolpyruvate-protein phosphotrans 99.12
PRK11177575 phosphoenolpyruvate-protein phosphotransferase; Pr 99.02
COG2301283 CitE Citrate lyase beta subunit [Carbohydrate tran 98.52
cd00727511 malate_synt_A Malate synthase A (MSA), present in 98.44
PRK09255531 malate synthase; Validated 98.34
PF02896293 PEP-utilizers_C: PEP-utilising enzyme, TIM barrel 98.25
TIGR01344511 malate_syn_A malate synthase A. This model represe 98.23
cd00480511 malate_synt Malate synthase catalyzes the Claisen 98.23
PLN02626551 malate synthase 97.88
PRK11061748 fused phosphoenolpyruvate-protein phosphotransfera 97.29
TIGR01828856 pyru_phos_dikin pyruvate, phosphate dikinase. This 96.96
PRK08649368 inosine 5-monophosphate dehydrogenase; Validated 96.52
COG1080574 PtsA Phosphoenolpyruvate-protein kinase (PTS syste 96.47
PRK09279879 pyruvate phosphate dikinase; Provisional 95.98
TIGR02751506 PEPCase_arch phosphoenolpyruvate carboxylase, arch 95.93
cd00381325 IMPDH IMPDH: The catalytic domain of the inosine m 95.55
PF00478352 IMPDH: IMP dehydrogenase / GMP reductase domain; I 95.31
TIGR01304369 IMP_DH_rel_2 IMP dehydrogenase family protein. Thi 95.28
PRK13655494 phosphoenolpyruvate carboxylase; Provisional 94.75
PLN02274505 inosine-5'-monophosphate dehydrogenase 94.63
PTZ00314495 inosine-5'-monophosphate dehydrogenase; Provisiona 94.57
COG3605756 PtsP Signal transduction protein containing GAF an 94.32
TIGR01302450 IMP_dehydrog inosine-5'-monophosphate dehydrogenas 94.27
TIGR01305343 GMP_reduct_1 guanosine monophosphate reductase, eu 94.21
PRK00009 911 phosphoenolpyruvate carboxylase; Reviewed 93.93
cd07944266 DRE_TIM_HOA_like 4-hydroxy-2-oxovalerate aldolase- 93.4
cd00958235 DhnA Class I fructose-1,6-bisphosphate (FBP) aldol 92.97
cd00429211 RPE Ribulose-5-phosphate 3-epimerase (RPE). This e 92.84
TIGR03151307 enACPred_II putative enoyl-(acyl-carrier-protein) 92.55
COG0574740 PpsA Phosphoenolpyruvate synthase/pyruvate phospha 92.52
PRK01130221 N-acetylmannosamine-6-phosphate 2-epimerase; Provi 92.46
PTZ00398 974 phosphoenolpyruvate carboxylase; Provisional 92.45
PRK13125244 trpA tryptophan synthase subunit alpha; Provisiona 92.03
cd04730236 NPD_like 2-Nitropropane dioxygenase (NPD), one of 91.87
PRK05096346 guanosine 5'-monophosphate oxidoreductase; Provisi 91.57
PRK07565334 dihydroorotate dehydrogenase 2; Reviewed 91.53
TIGR01306321 GMP_reduct_2 guanosine monophosphate reductase, ba 91.52
PRK05458326 guanosine 5'-monophosphate oxidoreductase; Provisi 91.35
PRK00915 513 2-isopropylmalate synthase; Validated 91.22
PRK00286438 xseA exodeoxyribonuclease VII large subunit; Revie 91.22
cd04740296 DHOD_1B_like Dihydroorotate dehydrogenase (DHOD) c 91.13
cd03174265 DRE_TIM_metallolyase DRE-TIM metallolyase superfam 90.82
PRK06843404 inosine 5-monophosphate dehydrogenase; Validated 90.75
cd07945280 DRE_TIM_CMS Leptospira interrogans citramalate syn 90.43
TIGR02090363 LEU1_arch isopropylmalate/citramalate/homocitrate 90.3
cd00945201 Aldolase_Class_I Class I aldolases. The class I al 90.14
PRK09389 488 (R)-citramalate synthase; Provisional 89.91
PRK07807479 inosine 5-monophosphate dehydrogenase; Validated 89.82
PRK05581220 ribulose-phosphate 3-epimerase; Validated 89.57
cd02940299 DHPD_FMN Dihydropyrimidine dehydrogenase (DHPD) FM 89.41
cd04739325 DHOD_like Dihydroorotate dehydrogenase (DHOD) like 89.4
PF14010491 PEPcase_2: Phosphoenolpyruvate carboxylase; PDB: 3 89.4
TIGR00973 494 leuA_bact 2-isopropylmalate synthase, bacterial ty 89.26
PRK02290344 3-dehydroquinate synthase; Provisional 89.24
cd04726202 KGPDC_HPS 3-Keto-L-gulonate 6-phosphate decarboxyl 89.06
cd04722200 TIM_phosphate_binding TIM barrel proteins share a 88.97
PRK07107502 inosine 5-monophosphate dehydrogenase; Validated 88.95
TIGR01949258 AroFGH_arch predicted phospho-2-dehydro-3-deoxyhep 88.89
PRK11858378 aksA trans-homoaconitate synthase; Reviewed 88.87
PRK08227264 autoinducer 2 aldolase; Validated 88.57
PRK09722229 allulose-6-phosphate 3-epimerase; Provisional 88.36
PTZ00170228 D-ribulose-5-phosphate 3-epimerase; Provisional 88.19
cd00958235 DhnA Class I fructose-1,6-bisphosphate (FBP) aldol 87.9
PRK08318420 dihydropyrimidine dehydrogenase subunit B; Validat 87.79
cd02810289 DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) 87.78
PRK08745223 ribulose-phosphate 3-epimerase; Provisional 87.48
PRK05567486 inosine 5'-monophosphate dehydrogenase; Reviewed 87.19
PRK13813215 orotidine 5'-phosphate decarboxylase; Provisional 87.07
cd07939259 DRE_TIM_NifV Streptomyces rubellomurinus FrbC and 87.02
cd04726202 KGPDC_HPS 3-Keto-L-gulonate 6-phosphate decarboxyl 87.0
PF01959354 DHQS: 3-dehydroquinate synthase (EC 4.6.1.3); Inte 86.83
PRK07695201 transcriptional regulator TenI; Provisional 86.67
PRK08883220 ribulose-phosphate 3-epimerase; Provisional 85.86
cd04729219 NanE N-acetylmannosamine-6-phosphate epimerase (Na 85.84
PRK02048 611 4-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha 85.81
TIGR01163210 rpe ribulose-phosphate 3-epimerase. This family co 85.72
PLN02334229 ribulose-phosphate 3-epimerase 85.71
PRK06852304 aldolase; Validated 85.51
PRK12595360 bifunctional 3-deoxy-7-phosphoheptulonate synthase 85.03
PLN02591250 tryptophan synthase 84.74
PF04551359 GcpE: GcpE protein; InterPro: IPR004588 This prote 84.62
TIGR00237432 xseA exodeoxyribonuclease VII, large subunit. This 84.59
PRK07259301 dihydroorotate dehydrogenase 1B; Reviewed 84.06
PRK13397250 3-deoxy-7-phosphoheptulonate synthase; Provisional 84.04
CHL00200263 trpA tryptophan synthase alpha subunit; Provisiona 83.87
PRK05286344 dihydroorotate dehydrogenase 2; Reviewed 83.56
PRK00043212 thiE thiamine-phosphate pyrophosphorylase; Reviewe 83.33
PRK13307391 bifunctional formaldehyde-activating enzyme/3-hexu 83.25
TIGR01037300 pyrD_sub1_fam dihydroorotate dehydrogenase (subfam 83.11
cd04732234 HisA HisA. Phosphoribosylformimino-5-aminoimidazol 82.89
PRK00694 606 4-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha 82.86
cd04724242 Tryptophan_synthase_alpha Ttryptophan synthase (TR 82.73
cd00452190 KDPG_aldolase KDPG and KHG aldolase. This family b 82.7
PRK15452 443 putative protease; Provisional 82.68
TIGR03128206 RuMP_HxlA 3-hexulose-6-phosphate synthase. at the 82.66
PF03060330 NMO: Nitronate monooxygenase; InterPro: IPR004136 82.61
PF00311 794 PEPcase: Phosphoenolpyruvate carboxylase; InterPro 82.48
cd02811326 IDI-2_FMN Isopentenyl-diphosphate:dimethylallyl di 82.43
PF00682237 HMGL-like: HMGL-like of this family is not conserv 82.36
PLN02826409 dihydroorotate dehydrogenase 82.1
cd07948262 DRE_TIM_HCS Saccharomyces cerevisiae homocitrate s 82.03
TIGR01303475 IMP_DH_rel_1 IMP dehydrogenase family protein. Thi 81.82
cd00331217 IGPS Indole-3-glycerol phosphate synthase (IGPS); 81.79
TIGR02660365 nifV_homocitr homocitrate synthase NifV. This fami 81.71
cd02803327 OYE_like_FMN_family Old yellow enzyme (OYE)-like F 81.44
cd07940268 DRE_TIM_IPMS 2-isopropylmalate synthase (IPMS), N- 81.42
PRK04302223 triosephosphate isomerase; Provisional 81.26
TIGR00977 526 LeuA_rel 2-isopropylmalate synthase/homocitrate sy 81.17
PLN02925 733 4-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha 80.84
PRK08195337 4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic ac 80.79
cd00640244 Trp-synth-beta_II Tryptophan synthase beta superfa 80.66
TIGR01361260 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate 80.63
TIGR00007230 phosphoribosylformimino-5-aminoimidazole carboxami 80.23
PRK07028430 bifunctional hexulose-6-phosphate synthase/ribonuc 80.18
PRK05581220 ribulose-phosphate 3-epimerase; Validated 80.16
>PLN02762 pyruvate kinase complex alpha subunit Back     alignment and domain information 
Probab=100.00  E-value=8.5e-140  Score=1140.74  Aligned_cols=503  Identities=89%  Similarity=1.320  Sum_probs=465.7

Q ss_pred             CCCcccccccchHhhhcCCCCCCCCceEEEecCCCCCCHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHHHHHHHHHhC
Q 007936           82 DSSSIEVDSVTEAELKENGFRSTRRTKLVCTIGPATCGFEQLEALAVGGMNVARINMCHGTREWHRRVIERVRRLNEEKG  161 (584)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~r~tKIi~TiGPa~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~e~~  161 (584)
                      +++++++|.+.+++|.|++++++|||||||||||+|+++|+|++|+++|||+||||||||++|+|+++++++|++++++|
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~rrTKIV~TiGPas~~~e~l~~li~aGm~v~RlNfSHg~~e~h~~~i~~iR~~~~~~~   81 (509)
T PLN02762          2 DSSGIDVDVVTEAELRENGFRSTRRTKLVCTIGPACCGFEQLEALAMGGMNVARLNMCHGTREWHRDVIRRVRRLNEEKG   81 (509)
T ss_pred             ccccccccccchhhhhhccccCCCCceEEEEeCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHcC
Confidence            46679999999999999998668999999999999999999999999999999999999999999999999999999999


Q ss_pred             CceEEEeecCCCeEEEeecCCCCceEeeCCCEEEEeecccCCCCCCCEEEecccchhcccCCCCEEEEeCCeeEEEEEEE
Q 007936          162 FAVAIMMDTEGSEIHMGDLSGPPSARAEDGEIWTFTVRAFDSPRPERTITVNYDGFAEDVKVGDELLVDGGMVRFEVIEK  241 (584)
Q Consensus       162 ~~i~I~lDl~GpkIR~G~~~~~~~i~l~~G~~v~~t~~~~~~~~~~~~i~v~~~~~~~~v~vGd~I~idDG~i~l~V~~~  241 (584)
                      ++++||+||+|||||+|++.++.++.|++|+.|+|+.+...+..+++.+++||++|++++++||.|++|||+|.|+|+++
T Consensus        82 ~~vaIl~Dl~GPkIR~g~~~~~~~i~l~~G~~v~lt~~~~~g~~~~~~i~v~y~~l~~~v~~Gd~IlidDG~i~l~V~~~  161 (509)
T PLN02762         82 FAVAVMMDTEGSEIHMGDLGGASSAKAEDGEEWTFTVRKFDGSRPEFTIQVNYDGFAEDVKVGDELVVDGGMVRFEVIEK  161 (509)
T ss_pred             CceEEEecCCCCceEEEecCCCccEEecCCCEEEEeCCccCCCCCCcEEeechHHHHHhcCCCCEEEEeCCEEEEEEEEE
Confidence            99999999999999999997545799999999999987433433457899999999999999999999999999999999


Q ss_pred             eCCeEEEEEEcCceeCCCceeeeccCCcccCCccccCCCCCccCHhhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhh
Q 007936          242 IGPDVKCRCTDPGLLLPRANLTFWRDGSLVRERNAMLPTISPKDWLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAAR  321 (584)
Q Consensus       242 ~~~~i~c~v~~~G~l~s~Kgvnf~~~~~~lp~~~~~lp~lt~kD~~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~  321 (584)
                      +++.+.|+|.+||.|++|||||||++|+.+||+.+++|.||+||++||+||+++|+|||++|||++++||+++|++|...
T Consensus       162 ~~~~v~~~v~~~G~l~~~KgvNl~~~g~~~p~~~~~lp~ltekD~~di~f~~~~~vD~ia~SFVr~a~Dv~~~r~~l~~~  241 (509)
T PLN02762        162 IGPDVKCKCTDPGLLLPRANLTFWRDGSLVRERNAMLPTISSKDWLDIDFGISEGVDFIAVSFVKSAEVIKHLKSYIAAR  241 (509)
T ss_pred             ECCEEEEEEEeCcEEcCCCceeeccccCCCCCCccCCCCCCHHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999644


Q ss_pred             cCCCCceEEEeecCHHHHhcHHHHHHhCCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCC
Q 007936          322 SRDSDIAVIAKIESIDSLKNLEEIILASDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPT  401 (584)
Q Consensus       322 ~~~~~i~IiAKIEt~~av~NldeIl~~sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~  401 (584)
                      +.+.+++||||||+++|++|||||++++|||||||||||+|+|+|+||.+||+||++|+++|||||+||||||||++||+
T Consensus       242 g~~~~~~IiAKIE~~~av~nl~eIi~~sDgiMVARGDLGvEip~e~vp~~QK~II~~c~~~gKPVIvATQmLeSMi~np~  321 (509)
T PLN02762        242 SRDSDIGVIAKIESLDSLKNLEEIIRASDGAMVARGDLGAQIPLEQVPSVQEKIVRLCRQLNKPVIVASQLLESMIEYPT  321 (509)
T ss_pred             CCCCCceEEEEeCCHHHHHHHHHHHHhcCEEEEecCccccccCHHHhHHHHHHHHHHHHHhCCCEEEECchHHhhhhCCC
Confidence            33337999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCcChHHHHHHHH
Q 007936          402 PTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSLRIEKWWREEKRHEAMELPDVGSSFAESISEEICNSA  481 (584)
Q Consensus       402 PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~sa  481 (584)
                      |||||++||+|||+||+||+|||+|||+|+||+|||++|++||+++|+++.+...+..+..+........+..+++|.+|
T Consensus       322 PTRAEvsDVaNAVlDGtDavMLSgETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~~~aia~sa  401 (509)
T PLN02762        322 PTRAEVADVSEAVRQRADALMLSGESAMGLYPEKALSVLRSVSLRMELWSREEKRHEALELPQLSSSLSDRISEEICNSA  401 (509)
T ss_pred             CCchhHHHHHHHHHhCCCEEEEcchhcCCCCHHHHHHHHHHHHHHHHhhhhhcchhhhhhhhccccccccchHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999875332111111111111111235679999999


Q ss_pred             HHHHhhcCCcEEEEccCCchHHHHHhccCCCCcEEEEcCchhhhcccccccccEEEEecCCCCHHHHHHHHHHHHHHcCC
Q 007936          482 AKMANNLEVDALFVYTKTGHMASLLSRCRPDCPIFAFTSTTSVRRRLNLRWGLIPFRLSFSDDMESNLNRTFSLLKARGM  561 (584)
Q Consensus       482 v~~A~~l~a~aIvv~T~sG~tA~~lSr~RP~~PIiavT~~~~~aR~l~l~~GV~P~~~~~~~d~~~~i~~~~~~~k~~g~  561 (584)
                      +++|++++|++||+||+||+||+++|||||.|||||+|++++++|+|+|+|||+|++.++..+.+++++.++++++++|+
T Consensus       402 ~~~A~~l~a~aIv~~T~sG~tA~~iSk~RP~~pIia~t~~~~~~r~l~l~~GV~p~~~~~~~~~~~~~~~~~~~~~~~g~  481 (509)
T PLN02762        402 AKMANNLGVDAIFVYTKHGHMASLLSRNRPDCPIFAFTDTTSVRRRLNLQWGLIPFRLDFSDDMESNLNKTFSLLKARGM  481 (509)
T ss_pred             HHHHhhcCCCEEEEECCCcHHHHHHHhhCCCCCEEEECCCHHHHHHhhcccCcEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            99999999999999999999999999999999999999999999999999999999998888999999999999999999


Q ss_pred             CCCCCEEEEEecC-----CceEEEEEcC
Q 007936          562 IKSGDLVIAVSDV-----LQSIQVMNVP  584 (584)
Q Consensus       562 i~~GD~Vvvv~g~-----~~sI~v~~v~  584 (584)
                      +++||.||+++|.     +|+|+|++||
T Consensus       482 ~~~GD~VVv~~g~~~~g~tn~i~v~~v~  509 (509)
T PLN02762        482 IKSGDLVIAVSDLTPSSMLQSIQVRNVP  509 (509)
T ss_pred             CCCCCEEEEEeCCCCCCCceEEEEEEcC
Confidence            9999999999983     6999999997

>PTZ00066 pyruvate kinase; Provisional Back     alignment and domain information
>PLN02461 Probable pyruvate kinase Back     alignment and domain information
>PRK09206 pyruvate kinase; Provisional Back     alignment and domain information
>PRK06247 pyruvate kinase; Provisional Back     alignment and domain information
>COG0469 PykF Pyruvate kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02765 pyruvate kinase Back     alignment and domain information
>PRK06354 pyruvate kinase; Provisional Back     alignment and domain information
>cd00288 Pyruvate_Kinase Pyruvate kinase (PK): Large allosteric enzyme that regulates glycolysis through binding of the substrate, phosphoenolpyruvate, and one or more allosteric effectors Back     alignment and domain information
>PRK05826 pyruvate kinase; Provisional Back     alignment and domain information
>PLN02623 pyruvate kinase Back     alignment and domain information
>PTZ00300 pyruvate kinase; Provisional Back     alignment and domain information
>TIGR01064 pyruv_kin pyruvate kinase Back     alignment and domain information
>KOG2323 consensus Pyruvate kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF00224 PK: Pyruvate kinase, barrel domain; InterPro: IPR015793 Pyruvate kinase (2 Back     alignment and domain information
>PRK06739 pyruvate kinase; Validated Back     alignment and domain information
>PRK14725 pyruvate kinase; Provisional Back     alignment and domain information
>PRK08187 pyruvate kinase; Validated Back     alignment and domain information
>PF02887 PK_C: Pyruvate kinase, alpha/beta domain; InterPro: IPR015795 Pyruvate kinase (2 Back     alignment and domain information
>TIGR03239 GarL 2-dehydro-3-deoxyglucarate aldolase Back     alignment and domain information
>PRK10558 alpha-dehydro-beta-deoxy-D-glucarate aldolase; Provisional Back     alignment and domain information
>PRK10128 2-keto-3-deoxy-L-rhamnonate aldolase; Provisional Back     alignment and domain information
>COG3836 HpcH 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR02311 HpaI 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase Back     alignment and domain information
>PF03328 HpcH_HpaI: HpcH/HpaI aldolase/citrate lyase family; InterPro: IPR005000 This family includes 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (4 Back     alignment and domain information
>TIGR01418 PEP_synth phosphoenolpyruvate synthase Back     alignment and domain information
>PRK06464 phosphoenolpyruvate synthase; Validated Back     alignment and domain information
>TIGR01588 citE citrate lyase, beta subunit Back     alignment and domain information
>TIGR01417 PTS_I_fam phosphoenolpyruvate-protein phosphotransferase Back     alignment and domain information
>PRK11177 phosphoenolpyruvate-protein phosphotransferase; Provisional Back     alignment and domain information
>COG2301 CitE Citrate lyase beta subunit [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd00727 malate_synt_A Malate synthase A (MSA), present in some bacteria, plants and fungi Back     alignment and domain information
>PRK09255 malate synthase; Validated Back     alignment and domain information
>PF02896 PEP-utilizers_C: PEP-utilising enzyme, TIM barrel domain; InterPro: IPR000121 A number of enzymes that catalyze the transfer of a phosphoryl group from phosphoenolpyruvate (PEP) via a phospho-histidine intermediate have been shown to be structurally related [, , , ] Back     alignment and domain information
>TIGR01344 malate_syn_A malate synthase A Back     alignment and domain information
>cd00480 malate_synt Malate synthase catalyzes the Claisen condensation of glyoxylate and acetyl-CoA to malyl-CoA , which hydrolyzes to malate and CoA Back     alignment and domain information
>PLN02626 malate synthase Back     alignment and domain information
>PRK11061 fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain; Provisional Back     alignment and domain information
>TIGR01828 pyru_phos_dikin pyruvate, phosphate dikinase Back     alignment and domain information
>PRK08649 inosine 5-monophosphate dehydrogenase; Validated Back     alignment and domain information
>COG1080 PtsA Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09279 pyruvate phosphate dikinase; Provisional Back     alignment and domain information
>TIGR02751 PEPCase_arch phosphoenolpyruvate carboxylase, archaeal type Back     alignment and domain information
>cd00381 IMPDH IMPDH: The catalytic domain of the inosine monophosphate dehydrogenase Back     alignment and domain information
>PF00478 IMPDH: IMP dehydrogenase / GMP reductase domain; InterPro: IPR001093 Synonym(s): Inosine-5'-monophosphate dehydrogenase, Inosinic acid dehydrogenase; Synonym(s): Guanosine 5'-monophosphate oxidoreductase This entry contains two related enzymes IMP dehydrogenase and GMP reducatase Back     alignment and domain information
>TIGR01304 IMP_DH_rel_2 IMP dehydrogenase family protein Back     alignment and domain information
>PRK13655 phosphoenolpyruvate carboxylase; Provisional Back     alignment and domain information
>PLN02274 inosine-5'-monophosphate dehydrogenase Back     alignment and domain information
>PTZ00314 inosine-5'-monophosphate dehydrogenase; Provisional Back     alignment and domain information
>COG3605 PtsP Signal transduction protein containing GAF and PtsI domains [Signal transduction mechanisms] Back     alignment and domain information
>TIGR01302 IMP_dehydrog inosine-5'-monophosphate dehydrogenase Back     alignment and domain information
>TIGR01305 GMP_reduct_1 guanosine monophosphate reductase, eukaryotic Back     alignment and domain information
>PRK00009 phosphoenolpyruvate carboxylase; Reviewed Back     alignment and domain information
>cd07944 DRE_TIM_HOA_like 4-hydroxy-2-oxovalerate aldolase-like, N-terminal catalytic TIM barrel domain Back     alignment and domain information
>cd00958 DhnA Class I fructose-1,6-bisphosphate (FBP) aldolases of the archaeal type (DhnA homologs) found in bacteria and archaea Back     alignment and domain information
>cd00429 RPE Ribulose-5-phosphate 3-epimerase (RPE) Back     alignment and domain information
>TIGR03151 enACPred_II putative enoyl-(acyl-carrier-protein) reductase II Back     alignment and domain information
>COG0574 PpsA Phosphoenolpyruvate synthase/pyruvate phosphate dikinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK01130 N-acetylmannosamine-6-phosphate 2-epimerase; Provisional Back     alignment and domain information
>PTZ00398 phosphoenolpyruvate carboxylase; Provisional Back     alignment and domain information
>PRK13125 trpA tryptophan synthase subunit alpha; Provisional Back     alignment and domain information
>cd04730 NPD_like 2-Nitropropane dioxygenase (NPD), one of the nitroalkane oxidizing enzyme families, catalyzes oxidative denitrification of nitroalkanes to their corresponding carbonyl compounds and nitrites Back     alignment and domain information
>PRK05096 guanosine 5'-monophosphate oxidoreductase; Provisional Back     alignment and domain information
>PRK07565 dihydroorotate dehydrogenase 2; Reviewed Back     alignment and domain information
>TIGR01306 GMP_reduct_2 guanosine monophosphate reductase, bacterial Back     alignment and domain information
>PRK05458 guanosine 5'-monophosphate oxidoreductase; Provisional Back     alignment and domain information
>PRK00915 2-isopropylmalate synthase; Validated Back     alignment and domain information
>PRK00286 xseA exodeoxyribonuclease VII large subunit; Reviewed Back     alignment and domain information
>cd04740 DHOD_1B_like Dihydroorotate dehydrogenase (DHOD) class 1B FMN-binding domain Back     alignment and domain information
>cd03174 DRE_TIM_metallolyase DRE-TIM metallolyase superfamily Back     alignment and domain information
>PRK06843 inosine 5-monophosphate dehydrogenase; Validated Back     alignment and domain information
>cd07945 DRE_TIM_CMS Leptospira interrogans citramalate synthase (CMS) and related proteins, N-terminal catalytic TIM barrel domain Back     alignment and domain information
>TIGR02090 LEU1_arch isopropylmalate/citramalate/homocitrate synthases Back     alignment and domain information
>cd00945 Aldolase_Class_I Class I aldolases Back     alignment and domain information
>PRK09389 (R)-citramalate synthase; Provisional Back     alignment and domain information
>PRK07807 inosine 5-monophosphate dehydrogenase; Validated Back     alignment and domain information
>PRK05581 ribulose-phosphate 3-epimerase; Validated Back     alignment and domain information
>cd02940 DHPD_FMN Dihydropyrimidine dehydrogenase (DHPD) FMN-binding domain Back     alignment and domain information
>cd04739 DHOD_like Dihydroorotate dehydrogenase (DHOD) like proteins Back     alignment and domain information
>PF14010 PEPcase_2: Phosphoenolpyruvate carboxylase; PDB: 3ODM_C Back     alignment and domain information
>TIGR00973 leuA_bact 2-isopropylmalate synthase, bacterial type Back     alignment and domain information
>PRK02290 3-dehydroquinate synthase; Provisional Back     alignment and domain information
>cd04726 KGPDC_HPS 3-Keto-L-gulonate 6-phosphate decarboxylase (KGPDC) and D-arabino-3-hexulose-6-phosphate synthase (HPS) Back     alignment and domain information
>cd04722 TIM_phosphate_binding TIM barrel proteins share a structurally conserved phosphate binding motif and in general share an eight beta/alpha closed barrel structure Back     alignment and domain information
>PRK07107 inosine 5-monophosphate dehydrogenase; Validated Back     alignment and domain information
>TIGR01949 AroFGH_arch predicted phospho-2-dehydro-3-deoxyheptonate aldolase Back     alignment and domain information
>PRK11858 aksA trans-homoaconitate synthase; Reviewed Back     alignment and domain information
>PRK08227 autoinducer 2 aldolase; Validated Back     alignment and domain information
>PRK09722 allulose-6-phosphate 3-epimerase; Provisional Back     alignment and domain information
>PTZ00170 D-ribulose-5-phosphate 3-epimerase; Provisional Back     alignment and domain information
>cd00958 DhnA Class I fructose-1,6-bisphosphate (FBP) aldolases of the archaeal type (DhnA homologs) found in bacteria and archaea Back     alignment and domain information
>PRK08318 dihydropyrimidine dehydrogenase subunit B; Validated Back     alignment and domain information
>cd02810 DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) and Dihydropyrimidine dehydrogenase (DHPD) FMN-binding domain Back     alignment and domain information
>PRK08745 ribulose-phosphate 3-epimerase; Provisional Back     alignment and domain information
>PRK05567 inosine 5'-monophosphate dehydrogenase; Reviewed Back     alignment and domain information
>PRK13813 orotidine 5'-phosphate decarboxylase; Provisional Back     alignment and domain information
>cd07939 DRE_TIM_NifV Streptomyces rubellomurinus FrbC and related proteins, catalytic TIM barrel domain Back     alignment and domain information
>cd04726 KGPDC_HPS 3-Keto-L-gulonate 6-phosphate decarboxylase (KGPDC) and D-arabino-3-hexulose-6-phosphate synthase (HPS) Back     alignment and domain information
>PF01959 DHQS: 3-dehydroquinate synthase (EC 4 Back     alignment and domain information
>PRK07695 transcriptional regulator TenI; Provisional Back     alignment and domain information
>PRK08883 ribulose-phosphate 3-epimerase; Provisional Back     alignment and domain information
>cd04729 NanE N-acetylmannosamine-6-phosphate epimerase (NanE) converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate Back     alignment and domain information
>PRK02048 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Provisional Back     alignment and domain information
>TIGR01163 rpe ribulose-phosphate 3-epimerase Back     alignment and domain information
>PLN02334 ribulose-phosphate 3-epimerase Back     alignment and domain information
>PRK06852 aldolase; Validated Back     alignment and domain information
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed Back     alignment and domain information
>PLN02591 tryptophan synthase Back     alignment and domain information
>PF04551 GcpE: GcpE protein; InterPro: IPR004588 This protein previously of unknown biochemical function is essential in Escherichia coli Back     alignment and domain information
>TIGR00237 xseA exodeoxyribonuclease VII, large subunit Back     alignment and domain information
>PRK07259 dihydroorotate dehydrogenase 1B; Reviewed Back     alignment and domain information
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional Back     alignment and domain information
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional Back     alignment and domain information
>PRK05286 dihydroorotate dehydrogenase 2; Reviewed Back     alignment and domain information
>PRK00043 thiE thiamine-phosphate pyrophosphorylase; Reviewed Back     alignment and domain information
>PRK13307 bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase; Provisional Back     alignment and domain information
>TIGR01037 pyrD_sub1_fam dihydroorotate dehydrogenase (subfamily 1) family protein Back     alignment and domain information
>cd04732 HisA HisA Back     alignment and domain information
>PRK00694 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Validated Back     alignment and domain information
>cd04724 Tryptophan_synthase_alpha Ttryptophan synthase (TRPS) alpha subunit (TSA) Back     alignment and domain information
>cd00452 KDPG_aldolase KDPG and KHG aldolase Back     alignment and domain information
>PRK15452 putative protease; Provisional Back     alignment and domain information
>TIGR03128 RuMP_HxlA 3-hexulose-6-phosphate synthase Back     alignment and domain information
>PF03060 NMO: Nitronate monooxygenase; InterPro: IPR004136 2-Nitropropane dioxygenase (1 Back     alignment and domain information
>PF00311 PEPcase: Phosphoenolpyruvate carboxylase; InterPro: IPR021135 Phosphoenolpyruvate carboxylase (PEPCase), an enzyme found in all multicellular plants, catalyses the formation of oxaloacetate from phosphoenolpyruvate (PEP) and a hydrocarbonate ion [] Back     alignment and domain information
>cd02811 IDI-2_FMN Isopentenyl-diphosphate:dimethylallyl diphosphate isomerase type 2 (IDI-2) FMN-binding domain Back     alignment and domain information
>PF00682 HMGL-like: HMGL-like of this family is not conserved in other members Back     alignment and domain information
>PLN02826 dihydroorotate dehydrogenase Back     alignment and domain information
>cd07948 DRE_TIM_HCS Saccharomyces cerevisiae homocitrate synthase and related proteins, catalytic TIM barrel domain Back     alignment and domain information
>TIGR01303 IMP_DH_rel_1 IMP dehydrogenase family protein Back     alignment and domain information
>cd00331 IGPS Indole-3-glycerol phosphate synthase (IGPS); an enzyme in the tryptophan biosynthetic pathway, catalyzing the ring closure reaction of 1-(o-carboxyphenylamino)-1-deoxyribulose-5-phosphate (CdRP) to indole-3-glycerol phosphate (IGP), accompanied by the release of carbon dioxide and water Back     alignment and domain information
>TIGR02660 nifV_homocitr homocitrate synthase NifV Back     alignment and domain information
>cd02803 OYE_like_FMN_family Old yellow enzyme (OYE)-like FMN binding domain Back     alignment and domain information
>cd07940 DRE_TIM_IPMS 2-isopropylmalate synthase (IPMS), N-terminal catalytic TIM barrel domain Back     alignment and domain information
>PRK04302 triosephosphate isomerase; Provisional Back     alignment and domain information
>TIGR00977 LeuA_rel 2-isopropylmalate synthase/homocitrate synthase family protein Back     alignment and domain information
>PLN02925 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Back     alignment and domain information
>PRK08195 4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase,; Validated Back     alignment and domain information
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions Back     alignment and domain information
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase Back     alignment and domain information
>TIGR00007 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase Back     alignment and domain information
>PRK07028 bifunctional hexulose-6-phosphate synthase/ribonuclease regulator; Validated Back     alignment and domain information
>PRK05581 ribulose-phosphate 3-epimerase; Validated Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query584
2e28_A 587 Crystal Structure Analysis Of Pyruvate Kinase From 2e-74
3t05_A 606 Crystal Structure Of S. Aureus Pyruvate Kinase Leng 1e-71
3pp7_A498 Crystal Structure Of Leishmania Mexicana Pyruvate K 2e-71
1pkl_A499 The Structure Of Leishmania Pyruvate Kinase Length 2e-71
3e0v_A539 Crystal Structure Of Pyruvate Kinase From Leishmani 2e-70
1pky_A470 Pyruvate Kinase From E. Coli In The T-State Length 1e-69
1e0u_A470 Structure R271l Mutant Of E. Coli Pyruvate Kinase L 2e-69
1e0t_A470 R292d Mutant Of E. Coli Pyruvate Kinase Length = 47 7e-69
1f3w_A530 Recombinant Rabbit Muscle Pyruvate Kinase Length = 2e-68
1aqf_A530 Pyruvate Kinase From Rabbit Muscle With Mg, K, And 2e-68
1pkn_A530 Structure Of Rabbit Muscle Pyruvate Kinase Complexe 3e-68
2g50_A530 The Location Of The Allosteric Amino Acid Binding S 5e-68
3n25_A531 The Structure Of Muscle Pyruvate Kinase In Complex 5e-68
1f3x_A530 S402p Mutant Of Rabbit Muscle Pyruvate Kinase Lengt 8e-68
1pkm_A530 The Refined Three-Dimensional Structure Of Cat Musc 2e-67
3srf_C551 Human M1 Pyruvate Kinase Length = 551 4e-67
3g2g_A533 S437y Mutant Of Human Muscle Pyruvate Kinase, Isofo 4e-66
2vgg_A528 Human Erythrocyte Pyruvate Kinase: R479h Mutant Len 4e-66
4g1n_A518 Pkm2 In Complex With An Activator Length = 518 5e-66
3bjt_A530 Pyruvate Kinase M2 Is A Phosphotyrosine Binding Pro 5e-66
3srd_A551 Human M2 Pyruvate Kinase In Complex With Fructose 1 5e-66
3u2z_A533 Activator-Bound Structure Of Human Pyruvate Kinase 5e-66
1t5a_A567 Human Pyruvate Kinase M2 Length = 567 5e-66
4b2d_D548 Human Pkm2 With L-serine And Fbp Bound Length = 548 5e-66
3gqy_A550 Activator-Bound Structure Of Human Pyruvate Kinase 5e-66
3bjf_A518 Pyruvate Kinase M2 Is A Phosphotyrosine Binding Pro 6e-66
1zjh_A548 Structure Of Human Muscle Pyruvate Kinase (Pkm2) Le 6e-66
3qv9_A499 Crystal Structure Of Trypanosoma Cruzi Pyruvate Kin 2e-65
4ip7_A543 Structure Of The S12d Variant Of Human Liver Pyruva 5e-65
2vgb_A528 Human Erythrocyte Pyruvate Kinase Length = 528 5e-65
2vgf_A528 Human Erythrocyte Pyruvate Kinase: T384m Mutant Len 3e-64
4ima_A543 The Structure Of C436m-hlpyk In Complex With Citrat 3e-64
2vgi_A528 Human Erythrocyte Pyruvate Kinase: R486w Mutant Len 7e-64
4drs_A526 Crystal Structure Of Cryptosporidium Parvum Pyruvat 3e-63
3ma8_A534 Crystal Structure Of Cgd1_2040, A Pyruvate Kinase F 3e-63
3eoe_A511 Crystal Structure Of Pyruvate Kinase From Toxoplasm 7e-63
3khd_A520 Crystal Structure Of Pff1300w. Length = 520 8e-63
1a3w_A500 Pyruvate Kinase From Saccharomyces Cerevisiae Compl 5e-60
3qtg_A461 Crystal Structure Of Pyruvate Kinase From Pyrobacul 6e-37
>pdb|2E28|A Chain A, Crystal Structure Analysis Of Pyruvate Kinase From Bacillus Stearothermophilus Length = 587 Back     alignment and structure 
Iteration: 1

 Score =  276 bits (707), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 170/476 (35%), Positives = 259/476 (54%), Gaps = 26/476 (5%)
Query: 105 RRTKLVCTIGPATCGFEQLEALAVGGMNVARINMCHGTREWHRRVIERVRRLNEEKGFAV 164
           R+TK+V TIGPA+   ++L  L   GMNVAR+N  HG  E H R I  +R   +  G  V
Sbjct: 3   RKTKIVSTIGPASESVDKLVQLMEAGMNVARLNFSHGDHEEHGRRIANIREAAKRTGRTV 62
Query: 165 AIMMDTEGSEIHMGDLSGPPSARAEDGEIWTFTVRAFDSPRPERTITVNYDGFAEDVKVG 224
           AI++DT+G EI   ++        E  ++         +P     I+V Y    +DV VG
Sbjct: 63  AILLDTKGPEIRTHNMENGAIELKEGSKLVISMSEVLGTPEK---ISVTYPSLIDDVSVG 119
Query: 225 DELLVDGGMVRFEV--IEKIGPDVKCRCTDPGLLLPRANLTFWRDGSLVRERNAMLPTIS 282
            ++L+D G++  EV  ++K   ++     + G+L         + G  V      LP I+
Sbjct: 120 AKILLDDGLISLEVNAVDKQAGEIVTTVLNGGVL-------KNKKGVNVPGVKVNLPGIT 172
Query: 283 PKDWLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNL 342
            KD  DI FGI +G+DFIA SFV+ A  +  ++  + A      I +IAKIE+ + + N+
Sbjct: 173 EKDRADILFGIRQGIDFIAASFVRRASDVLEIRELLEAHDA-LHIQIIAKIENEEGVANI 231
Query: 343 EEIILASDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTP 402
           +EI+ A+DG MVARGDLG +IP E+VP  Q+ +++    L KPVI A+Q+L+SM   P P
Sbjct: 232 DEILEAADGLMVARGDLGVEIPAEEVPLIQKLLIKKSNMLGKPVITATQMLDSMQRNPRP 291
Query: 403 TRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSLRIEKWWREEKRHEAMEL 462
           TRAE +DV+ A+    DA+MLSGE+A GQ+P +A+  +  ++LR E         +A+E 
Sbjct: 292 TRAEASDVANAIFDGTDAVMLSGETAAGQYPVEAVKTMHQIALRTE---------QALEH 342
Query: 463 PDVGSSFAE----SISEEICNSAAKMANNLEVDALFVYTKTGHMASLLSRCRPDCPIFAF 518
            D+ S   +    +I++ I  S A  A NL+V A+   T +G    ++++ RP  PI A 
Sbjct: 343 RDILSQRTKESQTTITDAIGQSVAHTALNLDVAAIVTPTVSGKTPQMVAKYRPKAPIIAV 402
Query: 519 TSTTSVRRRLNLRWGLIPFRLSFSDDMESNLNRTFSLLKARGMIKSGDLVIAVSDV 574
           TS  +V RRL L WG+        +  +  L+         G++K GDLV+  + V
Sbjct: 403 TSNEAVSRRLALVWGVYTKEAPHVNTTDEMLDVAVDAAVRSGLVKHGDLVVITAGV 458
>pdb|3T05|A Chain A, Crystal Structure Of S. Aureus Pyruvate Kinase Length = 606 Back     alignment and structure
>pdb|3PP7|A Chain A, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase In Complex With The Drug Suramin, An Inhibitor Of Glycolysis. Length = 498 Back     alignment and structure
>pdb|1PKL|A Chain A, The Structure Of Leishmania Pyruvate Kinase Length = 499 Back     alignment and structure
>pdb|3E0V|A Chain A, Crystal Structure Of Pyruvate Kinase From Leishmania Mexicana In Complex With Sulphate Ions Length = 539 Back     alignment and structure
>pdb|1PKY|A Chain A, Pyruvate Kinase From E. Coli In The T-State Length = 470 Back     alignment and structure
>pdb|1E0U|A Chain A, Structure R271l Mutant Of E. Coli Pyruvate Kinase Length = 470 Back     alignment and structure
>pdb|1E0T|A Chain A, R292d Mutant Of E. Coli Pyruvate Kinase Length = 470 Back     alignment and structure
>pdb|1F3W|A Chain A, Recombinant Rabbit Muscle Pyruvate Kinase Length = 530 Back     alignment and structure
>pdb|1AQF|A Chain A, Pyruvate Kinase From Rabbit Muscle With Mg, K, And L- Phospholactate Length = 530 Back     alignment and structure
>pdb|1PKN|A Chain A, Structure Of Rabbit Muscle Pyruvate Kinase Complexed With Mn2+, K+, And Pyruvate Length = 530 Back     alignment and structure
>pdb|2G50|A Chain A, The Location Of The Allosteric Amino Acid Binding Site Of Muscle Pyruvate Kinase. Length = 530 Back     alignment and structure
>pdb|3N25|A Chain A, The Structure Of Muscle Pyruvate Kinase In Complex With Proline, Pyruvate, And Mn2+ Length = 531 Back     alignment and structure
>pdb|1F3X|A Chain A, S402p Mutant Of Rabbit Muscle Pyruvate Kinase Length = 530 Back     alignment and structure
>pdb|1PKM|A Chain A, The Refined Three-Dimensional Structure Of Cat Muscle (M1) Pyruvate Kinase, At A Resolution Of 2.6 Angstroms Length = 530 Back     alignment and structure
>pdb|3SRF|C Chain C, Human M1 Pyruvate Kinase Length = 551 Back     alignment and structure
>pdb|3G2G|A Chain A, S437y Mutant Of Human Muscle Pyruvate Kinase, Isoform M2 Length = 533 Back     alignment and structure
>pdb|2VGG|A Chain A, Human Erythrocyte Pyruvate Kinase: R479h Mutant Length = 528 Back     alignment and structure
>pdb|4G1N|A Chain A, Pkm2 In Complex With An Activator Length = 518 Back     alignment and structure
>pdb|3BJT|A Chain A, Pyruvate Kinase M2 Is A Phosphotyrosine Binding Protein Length = 530 Back     alignment and structure
>pdb|3SRD|A Chain A, Human M2 Pyruvate Kinase In Complex With Fructose 1-6 Bisphosphate And Oxalate. Length = 551 Back     alignment and structure
>pdb|3U2Z|A Chain A, Activator-Bound Structure Of Human Pyruvate Kinase M2 Length = 533 Back     alignment and structure
>pdb|1T5A|A Chain A, Human Pyruvate Kinase M2 Length = 567 Back     alignment and structure
>pdb|4B2D|D Chain D, Human Pkm2 With L-serine And Fbp Bound Length = 548 Back     alignment and structure
>pdb|3GQY|A Chain A, Activator-Bound Structure Of Human Pyruvate Kinase M2 Length = 550 Back     alignment and structure
>pdb|3BJF|A Chain A, Pyruvate Kinase M2 Is A Phosphotyrosine Binding Protein Length = 518 Back     alignment and structure
>pdb|1ZJH|A Chain A, Structure Of Human Muscle Pyruvate Kinase (Pkm2) Length = 548 Back     alignment and structure
>pdb|3QV9|A Chain A, Crystal Structure Of Trypanosoma Cruzi Pyruvate Kinase(Tcpyk)in Complex With Ponceau S. Length = 499 Back     alignment and structure
>pdb|4IP7|A Chain A, Structure Of The S12d Variant Of Human Liver Pyruvate Kinase In Complex With Citrate And Fbp. Length = 543 Back     alignment and structure
>pdb|2VGB|A Chain A, Human Erythrocyte Pyruvate Kinase Length = 528 Back     alignment and structure
>pdb|2VGF|A Chain A, Human Erythrocyte Pyruvate Kinase: T384m Mutant Length = 528 Back     alignment and structure
>pdb|4IMA|A Chain A, The Structure Of C436m-hlpyk In Complex With Citrate/mn/atp/fru-1,6-bp Length = 543 Back     alignment and structure
>pdb|2VGI|A Chain A, Human Erythrocyte Pyruvate Kinase: R486w Mutant Length = 528 Back     alignment and structure
>pdb|4DRS|A Chain A, Crystal Structure Of Cryptosporidium Parvum Pyruvate Kinase Length = 526 Back     alignment and structure
>pdb|3MA8|A Chain A, Crystal Structure Of Cgd1_2040, A Pyruvate Kinase From Cryptosporidium Parvum Length = 534 Back     alignment and structure
>pdb|3EOE|A Chain A, Crystal Structure Of Pyruvate Kinase From Toxoplasma Gondii, 55.M00007 Length = 511 Back     alignment and structure
>pdb|3KHD|A Chain A, Crystal Structure Of Pff1300w. Length = 520 Back     alignment and structure
>pdb|1A3W|A Chain A, Pyruvate Kinase From Saccharomyces Cerevisiae Complexed With Fbp, Pg, Mn2+ And K+ Length = 500 Back     alignment and structure
>pdb|3QTG|A Chain A, Crystal Structure Of Pyruvate Kinase From Pyrobaculum Aerophilum Length = 461 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query584
1e0t_A470 Pyruvate kinase, PK; phosphotransferase, glycolysi 1e-163
3ma8_A534 Pyruvate kinase; parasitology, pyruvate kiase, gly 1e-161
3hqn_D499 Pyruvate kinase, PK; TIM barrel, T-state enzyme, t 1e-160
1a3w_A500 Pyruvate kinase; allosteric regulation, tranferase 1e-160
3gg8_A511 Pyruvate kinase; malaria, genomics, proteomics, gl 1e-159
3t05_A 606 Pyruvate kinase, PK; tetramer, glycolysis, transfe 1e-158
3khd_A520 Pyruvate kinase; malaria, structural genomics, str 1e-157
2e28_A 587 Pyruvate kinase, PK; allosteric, transferase; 2.40 1e-157
3gr4_A550 Pyruvate kinase isozymes M1/M2; activator, acetyla 1e-156
3qtg_A461 Pyruvate kinase, PK; TIM barrel, glycolysis, trans 1e-148
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-09
2v5j_A287 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; l 2e-04
1dxe_A256 2-dehydro-3-deoxy-galactarate aldolase; class II a 3e-04
3qz6_A261 HPCH/HPAI aldolase; structural genomics, PSI-biolo 3e-04
2vws_A267 YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escher 4e-04
1izc_A339 Macrophomate synthase intermolecular diels-aldera; 7e-04
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A Length = 470 Back     alignment and structure
 Score =  473 bits (1221), Expect = e-163
 Identities = 154/475 (32%), Positives = 243/475 (51%), Gaps = 30/475 (6%)

Query: 105 RRTKLVCTIGPATCGFEQLEALAVGGMNVARINMCHGTREWHRRVIERVRRLNEEKGFAV 164
           ++TK+VCTIGP T   E L  +   GMNV R+N  HG    H + I+ +R +  + G   
Sbjct: 2   KKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTA 61

Query: 165 AIMMDTEGSEIHMGDLSGPPSARAEDGEIWTFTVRAFDSPRPERTITVNYDGFAEDVKVG 224
           AI++DT+G EI    L G      + G+ +TFT            + V Y+GF  D+ VG
Sbjct: 62  AILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDK-SVIGNSEMVAVTYEGFTTDLSVG 120

Query: 225 DELLVDGGMVRFEVIEKIGPDVKCRCTDPGLL-------LPRANLTFWRDGSLVRERNAM 277
           + +LVD G++  EV    G  V C+  + G L       LP  ++               
Sbjct: 121 NTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVNLPGVSIA-------------- 166

Query: 278 LPTISPKDWLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESID 337
           LP ++ KD  D+ FG  +GVDF+A SF++    +  ++ ++ A     +I +I+KIE+ +
Sbjct: 167 LPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHG-GENIHIISKIENQE 225

Query: 338 SLKNLEEIILASDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMI 397
            L N +EI+ ASDG MVARGDLG +IP+E+V  AQ+ +++ C +  K VI A+ +L+SMI
Sbjct: 226 GLNNFDEILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATMMLDSMI 285

Query: 398 EYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSLRIEKWWREEKRH 457
           + P PT AE  DV+ A+    DA+MLSGESA G++P +A++++ ++  R ++        
Sbjct: 286 KNPRPTDAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSIMATICERTDRVMNSRLEF 345

Query: 458 EAMELPDVGSSFAESISEEICNSAAKMANNLEVDALFVYTKTGHMASLLSRCRPDCPIFA 517
                          I+E +C  A + A  L+   + V T+ G  A  + +  PD  I A
Sbjct: 346 NNDNRK-------LRITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFPDATILA 398

Query: 518 FTSTTSVRRRLNLRWGLIPFRLSFSDDMESNLNRTFSLLKARGMIKSGDLVIAVS 572
            T+      +L L  G++P  +      +        L    G+   GD+V+ VS
Sbjct: 399 LTTNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQSGLAHKGDVVVMVS 453
>3ma8_A Pyruvate kinase; parasitology, pyruvate kiase, glycol kinase, magnesium, transferase, structural genomi structural genomics consortium; HET: CIT; 2.64A {Cryptosporidium parvum} Length = 534 Back     alignment and structure
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A* Length = 499 Back     alignment and structure
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A Length = 500 Back     alignment and structure
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A Length = 511 Back     alignment and structure
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* Length = 606 Back     alignment and structure
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7} Length = 520 Back     alignment and structure
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus} Length = 587 Back     alignment and structure
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 1zjh_A 3g2g_A 1t5a_A* 3bjt_A 3bjf_A* 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* 1aqf_A* 1pkm_A 2g50_A* 1pkn_A 2vgb_A* 2vgf_A* 2vgg_A* ... Length = 550 Back     alignment and structure
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum} Length = 461 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A Length = 287 Back     alignment and structure
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A Length = 256 Back     alignment and structure
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} Length = 261 Back     alignment and structure
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A Length = 267 Back     alignment and structure
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5 Length = 339 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query584
4drs_A526 Pyruvate kinase; glycolysis, allosteric EN transfe 100.0
3khd_A520 Pyruvate kinase; malaria, structural genomics, str 100.0
3hqn_D499 Pyruvate kinase, PK; TIM barrel, T-state enzyme, t 100.0
3gr4_A550 Pyruvate kinase isozymes M1/M2; activator, acetyla 100.0
3gg8_A511 Pyruvate kinase; malaria, genomics, proteomics, gl 100.0
3t05_A 606 Pyruvate kinase, PK; tetramer, glycolysis, transfe 100.0
1e0t_A470 Pyruvate kinase, PK; phosphotransferase, glycolysi 100.0
2e28_A 587 Pyruvate kinase, PK; allosteric, transferase; 2.40 100.0
3qtg_A461 Pyruvate kinase, PK; TIM barrel, glycolysis, trans 100.0
1a3w_A500 Pyruvate kinase; allosteric regulation, tranferase 100.0
1izc_A339 Macrophomate synthase intermolecular diels-aldera; 99.75
2vws_A267 YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escher 99.7
2v5j_A287 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; l 99.68
3qz6_A261 HPCH/HPAI aldolase; structural genomics, PSI-biolo 99.66
1dxe_A256 2-dehydro-3-deoxy-galactarate aldolase; class II a 99.65
1sgj_A284 Citrate lyase, beta subunit; trimer, TIM barrel, s 99.54
2xz9_A324 Phosphoenolpyruvate-protein kinase (PTS system EI 99.28
3qll_A316 Citrate lyase; beta barrel; 2.45A {Yersinia pestis 99.15
1u5h_A273 CITE; TIM barrel, structural genomics, PSI, protei 99.08
2ols_A794 Phosphoenolpyruvate synthase; MC structural genomi 99.07
3qqw_A332 Putative citrate lyase; TIM beta/alpha-barrel, str 99.05
2hwg_A575 Phosphoenolpyruvate-protein phosphotransferase; en 98.95
3r4i_A339 Citrate lyase; TIM beta/alpha-barrel, structural g 98.95
2wqd_A572 Phosphoenolpyruvate-protein phosphotransferase; ki 98.93
3oyz_A433 Malate synthase; TIM barrel, transferase; HET: ACO 98.77
1vbg_A876 Pyruvate,orthophosphate dikinase; transferase, mai 98.38
1kbl_A873 PPDK, pyruvate phosphate dikinase; transferase, ph 98.25
3cuz_A532 MSA, malate synthase A; TIM barrel, cytoplasm, gly 97.79
3cux_A528 Malate synthase; TIM barrel, glyoxylate bypass, tr 97.63
1p7t_A731 MSG, malate synthase G; TIM barrel, glyoxylate cyc 97.48
1h6z_A913 Pyruvate phosphate dikinase; transferase, tropical 97.34
2x0s_A913 Pyruvate phosphate dikinase; transferase, tropical 96.4
3f4w_A211 Putative hexulose 6 phosphate synthase; humps, mal 93.96
4af0_A556 Inosine-5'-monophosphate dehydrogenase; oxidoreduc 93.91
4fo4_A366 Inosine 5'-monophosphate dehydrogenase; structural 93.69
3odm_A 560 Pepcase, PEPC, phosphoenolpyruvate carboxylase; be 93.59
3ffs_A400 Inosine-5-monophosphate dehydrogenase; beta-alpha 93.56
1jqo_A 970 Phosphoenolpyruvate carboxylase; beta barrel, carb 93.44
1t57_A206 Conserved protein MTH1675; structural genomics, FM 92.85
3khj_A361 Inosine-5-monophosphate dehydrogenase; enzyme-inhi 92.5
1jqn_A 883 Pepcase, PEPC, phosphoenolpyruvate carboxylase; be 92.38
4avf_A490 Inosine-5'-monophosphate dehydrogenase; oxidoreduc 92.15
1jcn_A514 Inosine monophosphate dehydrogenase I; IMPD, IMPDH 91.91
3usb_A511 Inosine-5'-monophosphate dehydrogenase; structural 91.68
1h1y_A228 D-ribulose-5-phosphate 3-epimerase; oxidative pent 91.64
3inp_A246 D-ribulose-phosphate 3-epimerase; IDP02542, isomer 91.58
4fxs_A496 Inosine-5'-monophosphate dehydrogenase; structural 91.53
1ydn_A295 Hydroxymethylglutaryl-COA lyase; TIM-barrel protei 91.41
1vp8_A201 Hypothetical protein AF0103; putative pyruvate kin 91.39
2z6i_A332 Trans-2-enoyl-ACP reductase II; fatty acid synthes 91.0
3r2g_A361 Inosine 5'-monophosphate dehydrogenase; structural 90.82
3ovp_A228 Ribulose-phosphate 3-epimerase; iron binding, isom 90.63
3ctl_A231 D-allulose-6-phosphate 3-epimerase; D-glucitol 6-p 89.65
3bo9_A326 Putative nitroalkan dioxygenase; TM0800, structura 89.45
3ble_A337 Citramalate synthase from leptospira interrogans; 89.0
1y0e_A223 Putative N-acetylmannosamine-6-phosphate 2-epimer; 88.39
1h1y_A228 D-ribulose-5-phosphate 3-epimerase; oxidative pent 88.29
3igs_A232 N-acetylmannosamine-6-phosphate 2-epimerase 2; ene 88.22
3eeg_A325 2-isopropylmalate synthase; 11106D, beta barrel, P 88.19
1gte_A1025 Dihydropyrimidine dehydrogenase; electron transfer 87.96
1tqj_A230 Ribulose-phosphate 3-epimerase; beta-alpha barrel 87.92
3rmj_A370 2-isopropylmalate synthase; LEUA, truncation, neis 87.87
3bw2_A369 2-nitropropane dioxygenase; TIM barrel, oxidoreduc 87.81
2gjl_A328 Hypothetical protein PA1024; 2-nitropropane dioxyg 87.6
2fli_A220 Ribulose-phosphate 3-epimerase; (beta/alpha)8-barr 87.45
1vrd_A494 Inosine-5'-monophosphate dehydrogenase; TM1347, st 86.41
1yad_A221 Regulatory protein TENI; TIM barrel, transcription 86.39
3ajx_A207 3-hexulose-6-phosphate synthase; HPS, OMPDC supraf 86.38
2ftp_A302 Hydroxymethylglutaryl-COA lyase; structural genomi 86.23
2c6q_A351 GMP reductase 2; TIM barrel, metal-binding, NADP, 86.15
2qjg_A273 Putative aldolase MJ0400; beta-alpha barrel, lyase 85.91
4g9p_A406 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; 85.55
2qjg_A273 Putative aldolase MJ0400; beta-alpha barrel, lyase 84.59
1ypf_A336 GMP reductase; GUAC, purines, pyrimidines, nucleos 84.55
3q58_A229 N-acetylmannosamine-6-phosphate 2-epimerase; TIM b 84.15
3cu2_A237 Ribulose-5-phosphate 3-epimerase; YP_718263.1, rib 84.05
3ewb_X293 2-isopropylmalate synthase; LEUA, structural genom 83.94
3qja_A272 IGPS, indole-3-glycerol phosphate synthase; struct 83.56
1w8s_A263 FBP aldolase, fructose-bisphosphate aldolase class 83.17
1eep_A404 Inosine 5'-monophosphate dehydrogenase; alpha-beta 83.13
1ydo_A307 HMG-COA lyase; TIM-barrel protein, structural geno 83.08
1f76_A336 Dihydroorotate dehydrogenase; monomer, alpha-beta- 82.97
2cw6_A298 Hydroxymethylglutaryl-COA lyase, mitochondrial; HM 82.93
2qr6_A393 IMP dehydrogenase/GMP reductase; NP_599840.1, G re 82.13
1jub_A311 Dihydroorotate dehydrogenase A; homodimer, alpha-b 81.43
3jr2_A218 Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulon 81.2
1ka9_F252 Imidazole glycerol phosphtate synthase; riken stru 80.76
3ivs_A423 Homocitrate synthase, mitochondrial; TIM barrel, m 80.61
2yw3_A207 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deox 80.33
1rpx_A230 Protein (ribulose-phosphate 3-epimerase); chloropl 80.05
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A* Back     alignment and structure
Probab=100.00  E-value=1e-133  Score=1098.54  Aligned_cols=487  Identities=32%  Similarity=0.508  Sum_probs=444.6

Q ss_pred             cccccccchHhhhcCCCCCCCCceEEEecCCCCCCHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHHHHHHHH-HhCCc
Q 007936           85 SIEVDSVTEAELKENGFRSTRRTKLVCTIGPATCGFEQLEALAVGGMNVARINMCHGTREWHRRVIERVRRLNE-EKGFA  163 (584)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~r~tKIi~TiGPa~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~-e~~~~  163 (584)
                      .+++|...+ .+..+ ..++|||||||||||+|+++|+|++|+++||||||||||||++|+|+++++++|++++ ++|+|
T Consensus        26 ~~~~~~~~~-~~~~~-~~~~RrTKIv~TlGPas~~~e~l~~Li~aGmnv~RlNfSHg~~e~h~~~i~~iR~~~~~~~~~~  103 (526)
T 4drs_A           26 CLGMDKICS-PLADN-DVTQRKTQIICTIGPSCNNVESLIGLIDKGMSVARLNFSHGDHESHFKTLQNIREAAKARPHST  103 (526)
T ss_dssp             HHHHHHC-----------CCCCSEEEEECCGGGCSHHHHHHHHHHTCCEEEEETTSSCHHHHHHHHHHHHHHHHTCTTCC
T ss_pred             cccchhhhc-ccccC-CcccCCceEEEeeCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHhcCCCc
Confidence            366776663 33333 3578999999999999999999999999999999999999999999999999999986 68999


Q ss_pred             eEEEeecCCCeEEEeecCCCCceEeeCCCEEEEeecccCCCCCCCEEEecccchhcccCCCCEEEEeCCeeEEEEEEEeC
Q 007936          164 VAIMMDTEGSEIHMGDLSGPPSARAEDGEIWTFTVRAFDSPRPERTITVNYDGFAEDVKVGDELLVDGGMVRFEVIEKIG  243 (584)
Q Consensus       164 i~I~lDl~GpkIR~G~~~~~~~i~l~~G~~v~~t~~~~~~~~~~~~i~v~~~~~~~~v~vGd~I~idDG~i~l~V~~~~~  243 (584)
                      ++||+||+|||||||.+.++.+++|++|++|+|+.+. ...++++.|+++|++|++++++||.|+||||++.|+|.++.+
T Consensus       104 vaIl~Dl~GPkIR~g~~~~~~~i~L~~G~~v~lt~~~-~~~g~~~~i~v~y~~l~~~v~~Gd~IlidDG~i~l~V~~v~~  182 (526)
T 4drs_A          104 VGIMLDTKGPEIRTGMLEGGKPIELKAGQTLKITTDY-SMLGNSECISCSYSLLPKSVQIGSTVLIADGSLSTQVLEIGD  182 (526)
T ss_dssp             CEEEEECCCSCCBBCCBSTTCCEECCTTSEEEEESCC-SSCBCSSEEEBSCTTSTTTCCTTCEEEETTTTEEEEEEEECS
T ss_pred             eEEEEECCCCeeEEEecCCCCeEEecCCCEEEEEeCC-ccCCCcceeeecchhhHHHhcCCCEEEEeCCCceEEEEEEeC
Confidence            9999999999999999987667999999999999873 223466799999999999999999999999999999999999


Q ss_pred             CeEEEEEEcCceeCCCceeeeccCCcccCCccccCCCCCccCHhh-hHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhc
Q 007936          244 PDVKCRCTDPGLLLPRANLTFWRDGSLVRERNAMLPTISPKDWLD-IDFGITEGVDFIAISFVKSAEVINHLKSYIAARS  322 (584)
Q Consensus       244 ~~i~c~v~~~G~l~s~Kgvnf~~~~~~lp~~~~~lp~lt~kD~~d-I~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~  322 (584)
                      +.+.|+|++||.|+++||||       +||..+++|.||+||++| |+||+++|+|||++|||++++||.++|++|...+
T Consensus       183 ~~i~~~V~~gG~L~~~KgvN-------lP~~~l~lp~lTekD~~D~l~fa~~~~vD~ialSFVr~~~Dv~~~r~~l~~~g  255 (526)
T 4drs_A          183 DFIVCKVLNSVTIGERKNMN-------LPGCKVHLPIIGDKDRHDIVDFALKYNLDFIALSFVQNGADVQLCRQIISENT  255 (526)
T ss_dssp             SEEEEECCSCCEECSSCBEE-------CTTCCCCCCSSCHHHHHHHHHTTTTTTCSEEEETTCCSHHHHHHHHHHHHTCC
T ss_pred             CeEEEEeccCcccccccccc-------CCCcccCcccccchhHHHHHHHHHHhccCeeeecccCchhhHHHHHHHHHhhC
Confidence            99999999999999999999       999999999999999998 6899999999999999999999999999996432


Q ss_pred             C-----CCCceEEEeecCHHHHhcHHHHHHhCCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhh
Q 007936          323 R-----DSDIAVIAKIESIDSLKNLEEIILASDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMI  397 (584)
Q Consensus       323 ~-----~~~i~IiAKIEt~~av~NldeIl~~sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi  397 (584)
                      .     +.+++||||||+++|++|||||++++|||||||||||+|+|+|+||.+||+||++|+++|||||+||||||||+
T Consensus       256 ~~~~~~~~~i~IiaKIE~~~av~NldeIi~~sDgIMVARGDLgvEip~e~vp~~QK~II~~c~~~gKPVI~ATQmLeSMi  335 (526)
T 4drs_A          256 QYSNGIPSSIKIISKIENLEGVINFDSICSESDGIMVARGDLGMEIPPEKIFVAQKCMISKCNVAGKPVVTATQMLESMI  335 (526)
T ss_dssp             TTTTTCCCCCEEEEEECSHHHHHTHHHHHHHSSEEEEECTTHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESCTTGGGG
T ss_pred             cccccccccceeeeehhccHHHHHHHHHHhhccEEEEECCcccccCCHHHHHHHHHHHHHHHHHcCCeEEEhhhhhHHHh
Confidence            1     24689999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCcChHHHH
Q 007936          398 EYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSLRIEKWWREEKRHEAMELPDVGSSFAESISEEI  477 (584)
Q Consensus       398 ~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  477 (584)
                      +||+|||||++||||||+||+||+|||+|||.|+||+|||++|++||+++|+++.+...+......   .+.+.+..++|
T Consensus       336 ~np~PTRAEvsDVAnAV~DGaDavMLSgETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~---~~~~~~~~~ai  412 (526)
T 4drs_A          336 KSNRPTRAEMTDVANAVLDGSDCVMLSGETANGAFPFDAVNVMSRVCAQAETCIDYPVLYHAIHSS---VPKPVAVPEAI  412 (526)
T ss_dssp             SSSSCCHHHHHHHHHHHHHTCSEEEESHHHHSCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHH---SCSSCCHHHHH
T ss_pred             hCCCCCCchHHHHHHHHHhCCceEEEcchhhcccCHHHHHHHHHHHHHHHhhcccchhhhhhhhhc---cCCCCCHHHHH
Confidence            999999999999999999999999999999999999999999999999999976554333222111   12345789999


Q ss_pred             HHHHHHHHhhcCCcEEEEccCCchHHHHHhccCCCCcEEEEcCchhhhcccccccccEEEEecCCCCHHHHHHHHHHHHH
Q 007936          478 CNSAAKMANNLEVDALFVYTKTGHMASLLSRCRPDCPIFAFTSTTSVRRRLNLRWGLIPFRLSFSDDMESNLNRTFSLLK  557 (584)
Q Consensus       478 a~sav~~A~~l~a~aIvv~T~sG~tA~~lSr~RP~~PIiavT~~~~~aR~l~l~~GV~P~~~~~~~d~~~~i~~~~~~~k  557 (584)
                      |.+|+++|++++|++|++||.||+||+++|||||.|||||+|++.+++|+|+|+|||+|+++++..+.|++++.++++++
T Consensus       413 a~aa~~~A~~l~a~aIv~~T~sG~tA~~iSr~RP~~pI~a~T~~~~~~r~l~L~wGV~p~~~~~~~~~d~~i~~a~~~~~  492 (526)
T 4drs_A          413 ACSAVESAHDVNAKLIITITETGNTARLISKYRPSQTIIACTAKPEVARGLKIARGVKTYVLNSIHHSEVVISNALALAK  492 (526)
T ss_dssp             HHHHHHHHHHTTCSEEEEECSSSHHHHHHHHTCCSSEEEEEESCHHHHHHGGGSTTEEEEECSCCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCEEEEECCCcHHHHHHHhhCCCCCEEEECCCHHHHHhhhccCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HcCCCCCCCEEEEEecC-------CceEEEEEcC
Q 007936          558 ARGMIKSGDLVIAVSDV-------LQSIQVMNVP  584 (584)
Q Consensus       558 ~~g~i~~GD~Vvvv~g~-------~~sI~v~~v~  584 (584)
                      ++|++++||.||+++|.       ||+|||++||
T Consensus       493 ~~g~~~~GD~vVi~~G~p~g~~G~TN~lrv~~VP  526 (526)
T 4drs_A          493 EESLIESGDFAIAVHGVKESCPGSCNLMKIVRCP  526 (526)
T ss_dssp             HTTSCCTTCEEEEEC----------CCEEEEECC
T ss_pred             HCCCCCCcCEEEEEeccCCCCCCcceEEEEEECC
Confidence            99999999999999973       6999999998
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7} Back     alignment and structure
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A* Back     alignment and structure
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ... Back     alignment and structure
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A Back     alignment and structure
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A* Back     alignment and structure
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A Back     alignment and structure
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus} Back     alignment and structure
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum} Back     alignment and structure
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A Back     alignment and structure
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5 Back     alignment and structure
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A Back     alignment and structure
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A Back     alignment and structure
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0 Back     alignment and structure
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A Back     alignment and structure
>1sgj_A Citrate lyase, beta subunit; trimer, TIM barrel, structural genomics, PSI, protein structure initiative; 1.84A {Deinococcus radiodurans} SCOP: c.1.12.5 Back     alignment and structure
>2xz9_A Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); thermophilic, PEP-utilising enzyme, transferase; 1.68A {Thermoanaerobacter tengcongensis} PDB: 2bg5_A 2xz7_A* Back     alignment and structure
>3qll_A Citrate lyase; beta barrel; 2.45A {Yersinia pestis} Back     alignment and structure
>1u5h_A CITE; TIM barrel, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC, lyase; 1.65A {Mycobacterium tuberculosis} SCOP: c.1.12.5 PDB: 1u5v_A* 1z6k_A Back     alignment and structure
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis} Back     alignment and structure
>3qqw_A Putative citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 2.44A {Ralstonia eutropha} Back     alignment and structure
>2hwg_A Phosphoenolpyruvate-protein phosphotransferase; enzyme I, phosphoenolpyruvate:sugar phosphotransferase system, PTS; HET: NEP; 2.70A {Escherichia coli} PDB: 2kx9_A 2xdf_A 2l5h_A Back     alignment and structure
>3r4i_A Citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.24A {Burkholderia xenovorans} Back     alignment and structure
>2wqd_A Phosphoenolpyruvate-protein phosphotransferase; kinase, cytoplasm, transport, magnesium, PEP- utilising enzyme, phosphotransferase system; 2.40A {Staphylococcus aureus} PDB: 2hro_A Back     alignment and structure
>3oyz_A Malate synthase; TIM barrel, transferase; HET: ACO; 1.95A {Haloferax volcanii} PDB: 3oyx_A* 3pug_A Back     alignment and structure
>1vbg_A Pyruvate,orthophosphate dikinase; transferase, maize, riken structural genomics/proteomics INI RSGI, structural genomics; 2.30A {Zea mays} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1vbh_A* Back     alignment and structure
>1kbl_A PPDK, pyruvate phosphate dikinase; transferase, phosphotransferase; 1.94A {Clostridium symbiosum} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1kc7_A* 1dik_A 1ggo_A 1jde_A 2dik_A 2r82_A 2fm4_A Back     alignment and structure
>3cuz_A MSA, malate synthase A; TIM barrel, cytoplasm, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.04A {Escherichia coli} PDB: 3cv1_A 3cv2_A* Back     alignment and structure
>3cux_A Malate synthase; TIM barrel, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.70A {Bacillus anthracis} Back     alignment and structure
>1p7t_A MSG, malate synthase G; TIM barrel, glyoxylate cycle, acetyl-COA, cysteine-sulfenic lyase; HET: ACO PG4; 1.95A {Escherichia coli str} SCOP: c.1.13.1 PDB: 1y8b_A 1d8c_A* 2jqx_A Back     alignment and structure
>1h6z_A Pyruvate phosphate dikinase; transferase, tropical parasite, trypanosome; 3.00A {Trypanosoma brucei} PDB: 2x0s_A Back     alignment and structure
>2x0s_A Pyruvate phosphate dikinase; transferase, tropical parasite; 3.00A {Trypanosoma brucei} Back     alignment and structure
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0 Back     alignment and structure
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B* Back     alignment and structure
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A Back     alignment and structure
>3odm_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta-barrel, lyase; 2.95A {Clostridium perfringens} Back     alignment and structure
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum} Back     alignment and structure
>1jqo_A Phosphoenolpyruvate carboxylase; beta barrel, carbon dioxide fixation, lyase; 3.00A {Zea mays} SCOP: c.1.12.3 Back     alignment and structure
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2 Back     alignment and structure
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum} Back     alignment and structure
>1jqn_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta barrel, Mn2+ and DCDP complex, lyase; HET: DCO; 2.35A {Escherichia coli} SCOP: c.1.12.3 PDB: 1fiy_A* 1qb4_A Back     alignment and structure
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa} Back     alignment and structure
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A* Back     alignment and structure
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A* Back     alignment and structure
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A Back     alignment and structure
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp} Back     alignment and structure
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor} Back     alignment and structure
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis} Back     alignment and structure
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2 Back     alignment and structure
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A* Back     alignment and structure
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp} Back     alignment and structure
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A Back     alignment and structure
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A* Back     alignment and structure
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8} Back     alignment and structure
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A* Back     alignment and structure
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5 Back     alignment and structure
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A Back     alignment and structure
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0 Back     alignment and structure
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406} Back     alignment and structure
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A* Back     alignment and structure
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2 Back     alignment and structure
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis} Back     alignment and structure
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A* Back     alignment and structure
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A* Back     alignment and structure
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2 Back     alignment and structure
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1 Back     alignment and structure
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A* Back     alignment and structure
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri} Back     alignment and structure
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa} Back     alignment and structure
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A* Back     alignment and structure
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A Back     alignment and structure
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A* Back     alignment and structure
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A Back     alignment and structure
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A* Back     alignment and structure
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp} Back     alignment and structure
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus} Back     alignment and structure
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str} Back     alignment and structure
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A* Back     alignment and structure
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A Back     alignment and structure
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1 Back     alignment and structure
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp} Back     alignment and structure
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1 Back     alignment and structure
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A* Back     alignment and structure
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032} Back     alignment and structure
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A* Back     alignment and structure
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A* Back     alignment and structure
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1 Back     alignment and structure
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A* Back     alignment and structure
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A Back     alignment and structure
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 584
d1pkla2258 c.1.12.1 (A:1-87,A:187-357) Pyruvate kinase, N-ter 2e-46
d1pkla2258 c.1.12.1 (A:1-87,A:187-357) Pyruvate kinase, N-ter 1e-20
d1e0ta2246 c.1.12.1 (A:1-69,A:168-344) Pyruvate kinase, N-ter 6e-43
d1e0ta2246 c.1.12.1 (A:1-69,A:168-344) Pyruvate kinase, N-ter 5e-21
d2g50a2282 c.1.12.1 (A:12-115,A:218-395) Pyruvate kinase, N-t 9e-43
d2g50a2282 c.1.12.1 (A:12-115,A:218-395) Pyruvate kinase, N-t 1e-19
d1a3xa2265 c.1.12.1 (A:1-87,A:189-366) Pyruvate kinase, N-ter 6e-42
d1a3xa2265 c.1.12.1 (A:1-87,A:189-366) Pyruvate kinase, N-ter 1e-19
d1e0ta3117 c.49.1.1 (A:354-470) Pyruvate kinase, C-terminal d 1e-22
d1a3xa3134 c.49.1.1 (A:367-500) Pyruvate kinase, C-terminal d 3e-21
d2vgba3134 c.49.1.1 (A:440-573) Pyruvate kinase, C-terminal d 4e-20
d2g50a3135 c.49.1.1 (A:396-530) Pyruvate kinase, C-terminal d 1e-19
d1pkla3141 c.49.1.1 (A:358-498) Pyruvate kinase, C-terminal d 5e-19
d2g50a1102 b.58.1.1 (A:116-217) Pyruvate kinase (PK) {Rabbit 2e-11
d1a3xa1101 b.58.1.1 (A:88-188) Pyruvate kinase (PK) {Baker's 7e-11
d2vgba1102 b.58.1.1 (A:160-261) Pyruvate kinase (PK) {Human ( 1e-08
d1e0ta198 b.58.1.1 (A:70-167) Pyruvate kinase (PK) {Escheric 2e-08
d1pkla199 b.58.1.1 (A:88-186) Pyruvate kinase (PK) {Leishman 8e-07
d2i6ea1272 c.94.1.1 (A:16-287) Hypothetical protein DR0370 {D 7e-04
>d1pkla2 c.1.12.1 (A:1-87,A:187-357) Pyruvate kinase, N-terminal domain {Leishmania mexicana [TaxId: 5665]} Length = 258 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Phosphoenolpyruvate/pyruvate domain
family: Pyruvate kinase
domain: Pyruvate kinase, N-terminal domain
species: Leishmania mexicana [TaxId: 5665]

 Score =  161 bits (409), Expect = 2e-46
 Identities = 76/171 (44%), Positives = 113/171 (66%), Gaps = 2/171 (1%)

Query: 279 PTISPKDWLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDS 338
           P +S KD +D+ FG+ +GVD I  SF++SAE +  ++  +  + RD  I +I KIE+   
Sbjct: 88  PAVSAKDRVDLQFGVEQGVDMIFASFIRSAEQVGDVRKALGPKGRD--IMIICKIENHQG 145

Query: 339 LKNLEEIILASDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIE 398
           ++N++ II  SDG MVARGDLG +IP E+V  AQ+ ++  C    KPVI A+Q+LESM  
Sbjct: 146 VQNIDSIIEESDGIMVARGDLGVEIPAEKVVVAQKILISKCNVAGKPVICATQMLESMTY 205

Query: 399 YPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSLRIEK 449
            P PTRAEV+DV+ AV   AD +MLSGE+A G++P++ +  +  + L  + 
Sbjct: 206 NPRPTRAEVSDVANAVFNGADCVMLSGETAKGKYPNEVVQYMARICLEAQS 256
>d1pkla2 c.1.12.1 (A:1-87,A:187-357) Pyruvate kinase, N-terminal domain {Leishmania mexicana [TaxId: 5665]} Length = 258 Back     information, alignment and structure
>d1e0ta2 c.1.12.1 (A:1-69,A:168-344) Pyruvate kinase, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 246 Back     information, alignment and structure
>d1e0ta2 c.1.12.1 (A:1-69,A:168-344) Pyruvate kinase, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 246 Back     information, alignment and structure
>d2g50a2 c.1.12.1 (A:12-115,A:218-395) Pyruvate kinase, N-terminal domain {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 282 Back     information, alignment and structure
>d2g50a2 c.1.12.1 (A:12-115,A:218-395) Pyruvate kinase, N-terminal domain {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 282 Back     information, alignment and structure
>d1a3xa2 c.1.12.1 (A:1-87,A:189-366) Pyruvate kinase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 265 Back     information, alignment and structure
>d1a3xa2 c.1.12.1 (A:1-87,A:189-366) Pyruvate kinase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 265 Back     information, alignment and structure
>d1e0ta3 c.49.1.1 (A:354-470) Pyruvate kinase, C-terminal domain {Escherichia coli [TaxId: 562]} Length = 117 Back     information, alignment and structure
>d1a3xa3 c.49.1.1 (A:367-500) Pyruvate kinase, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 134 Back     information, alignment and structure
>d2g50a3 c.49.1.1 (A:396-530) Pyruvate kinase, C-terminal domain {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 135 Back     information, alignment and structure
>d1pkla3 c.49.1.1 (A:358-498) Pyruvate kinase, C-terminal domain {Leishmania mexicana [TaxId: 5665]} Length = 141 Back     information, alignment and structure
>d2g50a1 b.58.1.1 (A:116-217) Pyruvate kinase (PK) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 102 Back     information, alignment and structure
>d1a3xa1 b.58.1.1 (A:88-188) Pyruvate kinase (PK) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 101 Back     information, alignment and structure
>d1e0ta1 b.58.1.1 (A:70-167) Pyruvate kinase (PK) {Escherichia coli [TaxId: 562]} Length = 98 Back     information, alignment and structure
>d1pkla1 b.58.1.1 (A:88-186) Pyruvate kinase (PK) {Leishmania mexicana [TaxId: 5665]} Length = 99 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query584
d1e0ta2246 Pyruvate kinase, N-terminal domain {Escherichia co 100.0
d1pkla2258 Pyruvate kinase, N-terminal domain {Leishmania mex 100.0
d1a3xa2265 Pyruvate kinase, N-terminal domain {Baker's yeast 100.0
d2g50a2282 Pyruvate kinase, N-terminal domain {Rabbit (Orycto 100.0
d1e0ta3117 Pyruvate kinase, C-terminal domain {Escherichia co 99.96
d2g50a3135 Pyruvate kinase, C-terminal domain {Rabbit (Orycto 99.95
d1pkla3141 Pyruvate kinase, C-terminal domain {Leishmania mex 99.95
d2vgba3134 Pyruvate kinase, C-terminal domain {Human (Homo sa 99.95
d1a3xa3134 Pyruvate kinase, C-terminal domain {Baker's yeast 99.94
d1a3xa1101 Pyruvate kinase (PK) {Baker's yeast (Saccharomyces 99.84
d1e0ta198 Pyruvate kinase (PK) {Escherichia coli [TaxId: 562 99.84
d2g50a1102 Pyruvate kinase (PK) {Rabbit (Oryctolagus cuniculu 99.84
d2vgba1102 Pyruvate kinase (PK) {Human (Homo sapiens) [TaxId: 99.83
d1pkla199 Pyruvate kinase (PK) {Leishmania mexicana [TaxId: 99.82
d1dxea_253 2-dehydro-3-deoxy-galactarate aldolase {Escherichi 99.71
d1izca_299 Macrophomate synthase {Macrophoma commelinae [TaxI 99.64
d1sgja_231 Citrate lyase, beta subunit {Deinococcus radiodura 98.75
d1u5ha_223 Citrate lyase, beta subunit {Mycobacterium tubercu 98.57
d1kbla1364 Pyruvate phosphate dikinase, C-terminal domain {Cl 97.57
d1vbga1356 Pyruvate phosphate dikinase, C-terminal domain {Ma 97.52
d1h6za1366 Pyruvate phosphate dikinase, C-terminal domain {Tr 96.73
d1zfja1365 Inosine monophosphate dehydrogenase (IMPDH) {Strep 94.36
d1vrda1330 Inosine monophosphate dehydrogenase (IMPDH) {Therm 93.81
d1jr1a1378 Inosine monophosphate dehydrogenase (IMPDH) {Chine 92.81
d1eepa_388 Inosine monophosphate dehydrogenase (IMPDH) {Lyme 92.14
d1y0ea_222 Putative N-acetylmannosamine-6-phosphate 2-epimera 91.97
d2cu0a1368 Inosine monophosphate dehydrogenase (IMPDH) {Pyroc 91.69
d1t57a_186 Hypothetical protein MTH1675 {Methanobacterium the 89.76
d1jqoa_ 936 Phosphoenolpyruvate carboxylase {Escherichia coli 87.96
d1gtea2312 Dihydropyrimidine dehydrogenase, domain 4 {Pig (Su 85.97
d1jqna_ 880 Phosphoenolpyruvate carboxylase {Escherichia coli 85.25
d1n7ka_234 Deoxyribose-phosphate aldolase DeoC {Archaeon Aero 81.51
d1pvna1362 Inosine monophosphate dehydrogenase (IMPDH) {Tritr 80.82
d1vp8a_190 Hypothetical protein AF0103 {Archaeoglobus fulgidu 80.47
>d1e0ta2 c.1.12.1 (A:1-69,A:168-344) Pyruvate kinase, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Phosphoenolpyruvate/pyruvate domain
family: Pyruvate kinase
domain: Pyruvate kinase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.4e-80  Score=620.19  Aligned_cols=242  Identities=40%  Similarity=0.668  Sum_probs=218.6

Q ss_pred             CCCceEEEecCCCCCCHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHHHHHHHHHhCCceEEEeecCCCeEEEeecCCC
Q 007936          104 TRRTKLVCTIGPATCGFEQLEALAVGGMNVARINMCHGTREWHRRVIERVRRLNEEKGFAVAIMMDTEGSEIHMGDLSGP  183 (584)
Q Consensus       104 ~r~tKIi~TiGPa~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~e~~~~i~I~lDl~GpkIR~G~~~~~  183 (584)
                      ||||||||||||+|++++.|++|+++||||||||||||++++|+++|+++|+++++.|++++|++||+||+         
T Consensus         1 mrkTKIIaTiGPas~~~~~l~~li~aGvdv~RlN~SHg~~~~~~~~i~~ir~~~~~~~~~~~I~~Dl~gp~---------   71 (246)
T d1e0ta2           1 MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPA---------   71 (246)
T ss_dssp             CCCSEEEEECCGGGCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHHTCCCEEEEECCCCS---------
T ss_pred             CCCCeEEEeeCCCcCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHcCCCCcccccccccc---------
Confidence            79999999999999999999999999999999999999999999999999999999999999999999853         


Q ss_pred             CceEeeCCCEEEEeecccCCCCCCCEEEecccchhcccCCCCEEEEeCCeeEEEEEEEeCCeEEEEEEcCceeCCCceee
Q 007936          184 PSARAEDGEIWTFTVRAFDSPRPERTITVNYDGFAEDVKVGDELLVDGGMVRFEVIEKIGPDVKCRCTDPGLLLPRANLT  263 (584)
Q Consensus       184 ~~i~l~~G~~v~~t~~~~~~~~~~~~i~v~~~~~~~~v~vGd~I~idDG~i~l~V~~~~~~~i~c~v~~~G~l~s~Kgvn  263 (584)
                                                                                                      
T Consensus        72 --------------------------------------------------------------------------------   71 (246)
T d1e0ta2          72 --------------------------------------------------------------------------------   71 (246)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eccCCcccCCccccCCCCCccCHhhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHH
Q 007936          264 FWRDGSLVRERNAMLPTISPKDWLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLE  343 (584)
Q Consensus       264 f~~~~~~lp~~~~~lp~lt~kD~~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~Nld  343 (584)
                                       ||++|++|++||+++|+|||++|||++++||.++|++++.. .+.+++||||||+++|++||+
T Consensus        72 -----------------ltekD~~~i~~a~~~~vD~ialSFVr~~~Dv~~~r~~l~~~-~~~~~~iiaKIE~~~al~nld  133 (246)
T d1e0ta2          72 -----------------LAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAH-GGENIHIISKIENQEGLNNFD  133 (246)
T ss_dssp             -----------------SCHHHHHHHHHHHHHTCSEEEESSCCSHHHHHHHHHHHHTT-TCTTCEEEEEECSHHHHHTHH
T ss_pred             -----------------cccCcchhhhHHHHcCCCEEEEcCCCCHHHHHHHHHHHHHh-CCCCceEEEEecchhhhhchH
Confidence                             48999999999999999999999999999999999999532 235789999999999999999


Q ss_pred             HHHHhCCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEee
Q 007936          344 EIILASDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALML  423 (584)
Q Consensus       344 eIl~~sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imL  423 (584)
                      +|++++|||||||||||+|+|+++||.+||+|++.|+++|||||+||||||||+++|.|||||++||+|||.+|+||+||
T Consensus       134 eIi~~sDgImIaRGDLg~ei~~e~vp~~Qk~ii~~~~~~~kpvi~ATq~LeSM~~~p~PTRAEv~Dv~nav~dG~D~vmL  213 (246)
T d1e0ta2         134 EILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATMMLDSMIKNPRPTDAEAGDVANAILDGTDAVML  213 (246)
T ss_dssp             HHHHHSSEEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHHTCEEEEECC---------CCCHHHHHHHHHHHHHTCSEEEE
T ss_pred             HHHhhcceEEEEccchhhhCCHHHHHHHHHHHHHHHHHhCCCEEEehhhhhhhhcCCCCchHHHHHHHHHHHhCCcEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCChHHHHHHHHHHHHHHhhhhh
Q 007936          424 SGESAMGQFPDKALTVLRSVSLRIEKWWR  452 (584)
Q Consensus       424 s~ETa~G~yPveaV~~m~~I~~~aE~~~~  452 (584)
                      |+|||+|+||++||++|++||+++|+.+.
T Consensus       214 s~ETa~G~~P~~~v~~l~~i~~~~E~~~~  242 (246)
T d1e0ta2         214 SGESAKGKYPLEAVSIMATICERTDRVMN  242 (246)
T ss_dssp             CCC------CHHHHHHHHHHHHHHHTTCC
T ss_pred             ccccccCCCHHHHHHHHHHHHHHHHHhhh
Confidence            99999999999999999999999998654
>d1pkla2 c.1.12.1 (A:1-87,A:187-357) Pyruvate kinase, N-terminal domain {Leishmania mexicana [TaxId: 5665]} Back     information, alignment and structure
>d1a3xa2 c.1.12.1 (A:1-87,A:189-366) Pyruvate kinase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2g50a2 c.1.12.1 (A:12-115,A:218-395) Pyruvate kinase, N-terminal domain {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1e0ta3 c.49.1.1 (A:354-470) Pyruvate kinase, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2g50a3 c.49.1.1 (A:396-530) Pyruvate kinase, C-terminal domain {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1pkla3 c.49.1.1 (A:358-498) Pyruvate kinase, C-terminal domain {Leishmania mexicana [TaxId: 5665]} Back     information, alignment and structure
>d1a3xa3 c.49.1.1 (A:367-500) Pyruvate kinase, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1a3xa1 b.58.1.1 (A:88-188) Pyruvate kinase (PK) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1e0ta1 b.58.1.1 (A:70-167) Pyruvate kinase (PK) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2g50a1 b.58.1.1 (A:116-217) Pyruvate kinase (PK) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1pkla1 b.58.1.1 (A:88-186) Pyruvate kinase (PK) {Leishmania mexicana [TaxId: 5665]} Back     information, alignment and structure
>d1dxea_ c.1.12.5 (A:) 2-dehydro-3-deoxy-galactarate aldolase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1izca_ c.1.12.5 (A:) Macrophomate synthase {Macrophoma commelinae [TaxId: 108330]} Back     information, alignment and structure
>d1sgja_ c.1.12.5 (A:) Citrate lyase, beta subunit {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d1u5ha_ c.1.12.5 (A:) Citrate lyase, beta subunit {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1kbla1 c.1.12.2 (A:510-873) Pyruvate phosphate dikinase, C-terminal domain {Clostridium symbiosum [TaxId: 1512]} Back     information, alignment and structure
>d1vbga1 c.1.12.2 (A:521-876) Pyruvate phosphate dikinase, C-terminal domain {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1h6za1 c.1.12.2 (A:538-903) Pyruvate phosphate dikinase, C-terminal domain {Trypanosoma brucei [TaxId: 5691]} Back     information, alignment and structure
>d1zfja1 c.1.5.1 (A:2-94,A:221-492) Inosine monophosphate dehydrogenase (IMPDH) {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d1vrda1 c.1.5.1 (A:1-85,A:213-457) Inosine monophosphate dehydrogenase (IMPDH) {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1jr1a1 c.1.5.1 (A:17-112,A:233-514) Inosine monophosphate dehydrogenase (IMPDH) {Chinese hamster (Cricetulus griseus) [TaxId: 10029]} Back     information, alignment and structure
>d1eepa_ c.1.5.1 (A:) Inosine monophosphate dehydrogenase (IMPDH) {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]} Back     information, alignment and structure
>d1y0ea_ c.1.2.5 (A:) Putative N-acetylmannosamine-6-phosphate 2-epimerase NanE {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d2cu0a1 c.1.5.1 (A:3-96,A:207-480) Inosine monophosphate dehydrogenase (IMPDH) {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1t57a_ c.49.1.2 (A:) Hypothetical protein MTH1675 {Methanobacterium thermoautotrophicum [TaxId: 145262]} Back     information, alignment and structure
>d1jqoa_ c.1.12.3 (A:) Phosphoenolpyruvate carboxylase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gtea2 c.1.4.1 (A:533-844) Dihydropyrimidine dehydrogenase, domain 4 {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1jqna_ c.1.12.3 (A:) Phosphoenolpyruvate carboxylase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1n7ka_ c.1.10.1 (A:) Deoxyribose-phosphate aldolase DeoC {Archaeon Aeropyrum pernix [TaxId: 56636]} Back     information, alignment and structure
>d1pvna1 c.1.5.1 (A:2-99,A:231-494) Inosine monophosphate dehydrogenase (IMPDH) {Tritrichomonas foetus [TaxId: 5724]} Back     information, alignment and structure
>d1vp8a_ c.49.1.2 (A:) Hypothetical protein AF0103 {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure