Citrus Sinensis ID: 007977

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580--
MRVNVDLFDPQSNMDSDFSSGLPDSDFGFAFNDSNFSDRVLRIEIMPDLPDSKSDGDACSSIADWARNRKRRREEIKKDTVDVLVQREQILQCNMPDTEDGVAYENQDDEPEAMVEESPADVGLNLKQCEEATGNIDPAWSMDLSTVLRVKTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFALKWARTHYPKLEERREILGSRLGRLIRFPYMTCRKLKKVLTCNDFDPELASKVVLESLFFKAETPYRQRALAAEEANSTYRRFVERAYKYRPVKVVEFELPRQQCVVYLDLKREECAHLFPAGRIYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARIKPTEEYVSKYKGNYTFTGGKAVGYRNLFGIPWTAFMADDSIYFINGNLHLRAELTIRQ
cccccccccccccccccccccccccccEEccccccccccEEEEEEEcccccccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccEEEccccccEEcccEEEEEcccccHHHHHHHHHHHHHHHHcccccccccccEEEEEEccccHHHHHHHHHHHHcccEEEccccHHHHHHHHHccccHHHHHHHHHHHHHcccccHHHHHHHHccccccHHccccHHHHHHHHHHHHHHHHHHHcccHHHHcccHHHHHHHHcccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccccHHHHHHHcccccccHHHHHHHHHHHHHccccccccccHHHHccccccccEEcccccccccEEEEEcccccccEEEEcccccccccccccccEEEEEEEEEccccccccccccccccccEEEEEEEEEccccccEEEEEEEEEEEEcccccccccccccEEEEcccccccccccccccccccccccccEEEccEEEEEEEEEEcc
cccccccccccccccccccccccccccEEEEccccccccEEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccHHHcccccccccHccccccccccccEEEEEccccccccccccccHccccccccccccccEEEEEEEEEcccEEEEEccccEEEEEEEEEEccccccHHHHHHHHHHHHHHHHHHcccccccccEEEEEEccccHHHHHHHHHHHHcccEEEcccHHHHHHHHHHHHHccHHHHHHHHHHHHHccccHHHHHHHHccHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHccccccHHHHHHHHHHHHHHHcccHHHHHHcccccccccHHHHHHcccccccEEEEEccccccEEEEEcccHHHHHHHcccccEEEEEEEcccccEEEEEEEccccccccEEEEEEEEEcccccEEEEEEEEEEEEccccccEEEEEcccEEEccccccccccccccccHHHHcccccEEEccEEEEEEEEEEcc
mrvnvdlfdpqsnmdsdfssglpdsdfgfafndsnfsdrvlrieimpdlpdsksdgdacSSIADWARNRKRRREEIKKDTVDVLVQREQILqcnmpdtedgvayenqddepeamveespadvglnlkqceeatgnidpawsmdlSTVLRVKTVHisspilaakspffykvnvpslvyAFCIPWFLLLWLVILCIFLQLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYsstlstttpTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESAllyldlpssvlmadavqpLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVlasddlqiasEDAVYDFALKWARTHYPKLEERREILGSRLgrlirfpymTCRKLKKvltcndfdpelaSKVVLESLFFKAETPYRQRALAAEEANSTYRRFVERaykyrpvkvvefelprqqcvVYLDLKreecahlfpagriysqafhlggqgfflsahcnmdqqssfhcfglflgmqekgsvSFAVDYEFaarikpteeyVSKYkgnytftggkavgyrnlfgipwtafmaddsiyfINGNLHLRAELTIRQ
mrvnvdlfdpqsnmdsdfsSGLPDSDFGFAFNDSNFSDRVLRIEIMpdlpdsksdgdacsSIADwarnrkrrreeikkdtvdvlVQREqilqcnmpdtedGVAYENQDDEPEAMVEESPADVGLNLKQCEEATGNIDPAWSMDLSTVLRVKTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFALKWARthypkleerreilgsrlgrlirfpYMTCRKLKKVLTCNDFDPELASKVVLESLFFKAETPYRQRalaaeeanstyRRFVERAYKYrpvkvvefelprQQCVVYLDLKREECAHLFPAGRIYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAArikpteeyvskYKGNYTFTGGKAVGYRNLFGIPWTAFMADDSIYFINGNLHLRAELTIRQ
MRVNVDLFDPQSNMDSDFSSGLPDSDFGFAFNDSNFSDRVLRIEIMPDLPDSKSDGDACSSIADWArnrkrrreeikkDTVDVLVQREQILQCNMPDTEDGVAYENQDDEPEAMVEESPADVGLNLKQCEEATGNIDPAWSMDLSTVLRVKTVHISSPILAAKSPFFYKVNVPSLVYAFCIPwflllwlvilciflqlFSNGMRESEQRYVTLRIHASEEAALMELLNFMYsstlstttptallDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFALKWARTHYPKLEERREILGSRLGRLIRFPYMTCRKLKKVLTCNDFDPELASKVVLESLFFKAETPYRQRALAAEEANSTYRRFVERAYKYRPVKVVEFELPRQQCVVYLDLKREECAHLFPAGRIYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARIKPTEEYVSKYKGNYTFTGGKAVGYRNLFGIPWTAFMADDSIYFINGNLHLRAELTIRQ
***************************GFAFNDSNFSDRVLRIEI**********************************TVDVLVQREQILQC*******************************NLKQCEEATGNIDPAWSMDLSTVLRVKTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFALKWARTHYPKLEERREILGSRLGRLIRFPYMTCRKLKKVLTCNDFDPELASKVVLESLFFKAETPYRQRALAAEEANSTYRRFVERAYKYRPVKVVEFELPRQQCVVYLDLKREECAHLFPAGRIYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARIKPTEEYVSKYKGNYTFTGGKAVGYRNLFGIPWTAFMADDSIYFINGNLHLRAEL****
***NVDLFDP****************FGFAFNDSNFSDRVLRIEIMPD*************************************************************************************************TVLRVKTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFALKWARTHYPKLEERREILGSRLGRLIRFPYMTCRKLKKVLTCNDFDPELASKVVLESLFFK*********************FVERAYKYRPVKVVEFELPRQQCVVYLDLKREECAHLFPAGRIYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARIKPTEEYVSKYKGNYTFTGGKAVGYRNLFGIPWTAFMADDSIYFINGNLHLRAELTIR*
MRVNVDLFDPQSNMDSDFSSGLPDSDFGFAFNDSNFSDRVLRIEIMPDLPDSKSDGDACSSIADWARNRKRRREEIKKDTVDVLVQREQILQCNMPDTEDGVAYENQDDEPEAMVEESPADVGLNLKQCEEATGNIDPAWSMDLSTVLRVKTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFALKWARTHYPKLEERREILGSRLGRLIRFPYMTCRKLKKVLTCNDFDPELASKVVLESLFFKAETPYRQRALAAEEANSTYRRFVERAYKYRPVKVVEFELPRQQCVVYLDLKREECAHLFPAGRIYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARIKPTEEYVSKYKGNYTFTGGKAVGYRNLFGIPWTAFMADDSIYFINGNLHLRAELTIRQ
******LFDPQSNMDSDFSSGLPDSDFGFAFNDSNFSDRVLRIEIMPDLP*********S*I*****NRKRRREEIKKDTVDVLVQREQILQCNMPDTEDGVAYENQDDEPEAMVEESPA*******************WSMDLSTVLRVKTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFALKWARTHYPKLEERREILGSRLGRLIRFPYMTCRKLKKVLTCNDFDPELASKVVLESLFFKAETPYRQRALAAEEANSTYRRFVERAYKYRPVKVVEFELPRQQCVVYLDLKREECAHLFPAGRIYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARIKPTEEYVSKYKGNYTFTGGKAVGYRNLFGIPWTAFMADDSIYFINGNLHLRAELTIRQ
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MRVNVDLFDPQSNMDSDFSSGLPDSDFGFAFNDSNFSDRVLRIEIMPDLPDSKSDGDACSSIADWARNRKRRREEIKKDTVDVLVQREQILQCNMPDTEDGVAYENQDDEPEAMVEESPADVGLNLKQCEEATGNIDPAWSMDLSTVLRVKTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFALKWARTHYPKLEERREILGSRLGRLIRFPYMTCRKLKKVLTCNDFDPELASKVVLESLFFKAETPYRQRALAAEEANSTYRRFVERAYKYRPVKVVEFELPRQQCVVYLDLKREECAHLFPAGRIYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARIKPTEEYVSKYKGNYTFTGGKAVGYRNLFGIPWTAFMADDSIYFINGNLHLRAELTIRQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query582 2.2.26 [Sep-21-2011]
Q9FPW6561 BTB/POZ domain-containing yes no 0.932 0.967 0.717 0.0
O82343561 BTB/POZ domain-containing no no 0.931 0.966 0.712 0.0
O04615527 BTB/POZ domain-containing no no 0.890 0.982 0.545 1e-161
Q8NFY9 601 Kelch repeat and BTB doma yes no 0.297 0.287 0.258 6e-08
B1H285 575 Kelch repeat and BTB doma yes no 0.283 0.286 0.259 1e-07
Q3UQV5 599 Kelch repeat and BTB doma yes no 0.312 0.303 0.25 1e-07
Q6TDP4 642 Kelch-like protein 17 OS= no no 0.323 0.292 0.271 2e-07
Q3ZB90 623 Kelch repeat and BTB doma no no 0.314 0.293 0.268 3e-07
Q80TF4 654 Kelch-like protein 13 OS= no no 0.310 0.276 0.246 4e-07
Q9Z2X8 624 Kelch-like ECH-associated no no 0.300 0.280 0.232 5e-07
>sp|Q9FPW6|POB1_ARATH BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana GN=POB1 PE=2 SV=2 Back     alignment and function desciption
 Score =  833 bits (2152), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 421/587 (71%), Positives = 475/587 (80%), Gaps = 44/587 (7%)

Query: 4   NVDLFDPQSNMDSDFS--SGLPDSDFGFAFNDSNFSDRVLRIEIMPDLPDSKSDGDACSS 61
           N DLFDP++ MD DF+      D DFGFAFNDSNFSDR+LRIEIM    DS+S+ + C+S
Sbjct: 7   NTDLFDPKTQMDPDFTRHGSSSDGDFGFAFNDSNFSDRLLRIEIMGGPSDSRSEVEGCTS 66

Query: 62  IADWARNRKRRREEIKKD---TVDVLVQ--REQILQCNMPDTEDGVAYENQDDEP-EAMV 115
           IADWAR+RKRRRE+IKK+   T+  +V    EQIL    PD +     EN DDE  EAMV
Sbjct: 67  IADWARHRKRRREDIKKESGVTISDIVACPEEQILTDEQPDMDGCPGGENPDDEGGEAMV 126

Query: 116 EESPADVGLNLKQCEEATGNIDPAWSMDLSTVLRVKTVHISSPILAAKSPFFYKVNVPSL 175
           EE+       L   EE T + +P W MD STV+RVK +HISSPILAAKSPFFYK      
Sbjct: 127 EEA-------LSGDEEETSS-EPNWGMDCSTVVRVKELHISSPILAAKSPFFYK------ 172

Query: 176 VYAFCIPWFLLLWLVILCIFLQLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSSTL 235
                                 LFSNGMRESEQR+VTLRI+ASEEAALMELLNFMYS+ +
Sbjct: 173 ----------------------LFSNGMRESEQRHVTLRINASEEAALMELLNFMYSNAV 210

Query: 236 STTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVLMADAVQPL 295
           S TT  ALLDVLMAADKFEVASCMRYCSRLLRN+PMT ESALLYL+LPSSVLMA AVQPL
Sbjct: 211 SVTTAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMAKAVQPL 270

Query: 296 TDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFALKWARTHYP 355
           TD AKQFLAARYKDI+KF EEV++LPLAGIEA+L+SD+LQIASEDAVYDF LKWAR  YP
Sbjct: 271 TDAAKQFLAARYKDITKFHEEVMSLPLAGIEAILSSDELQIASEDAVYDFILKWARAQYP 330

Query: 356 KLEERREILGSRLGRLIRFPYMTCRKLKKVLTCNDFDPELASKVVLESLFFKAETPYRQR 415
            LEERREILGSRL   IRFP+MTCRKLKKVLTC+DF+ E+ASK+VLE+LFFKAE P+RQR
Sbjct: 331 CLEERREILGSRLALSIRFPFMTCRKLKKVLTCSDFEHEIASKLVLEALFFKAEAPHRQR 390

Query: 416 ALAAEEANSTYRRFVERAYKYRPVKVVEFELPRQQCVVYLDLKREECAHLFPAGRIYSQA 475
           +LA+EE+ S  RR +ERAYKYRPVKVVEFELPR QCVVYLDLKREEC  LFP+GR+YSQA
Sbjct: 391 SLASEESASLNRRLIERAYKYRPVKVVEFELPRPQCVVYLDLKREECGGLFPSGRVYSQA 450

Query: 476 FHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARIKPTEEYVSKYK 535
           FHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSF VDYEF+AR KP E+++SKYK
Sbjct: 451 FHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFGVDYEFSARSKPAEDFISKYK 510

Query: 536 GNYTFTGGKAVGYRNLFGIPWTAFMADDSIYFINGNLHLRAELTIRQ 582
           GNYTFTGGKAVGYRNLFG+PWT+F+A+DS YFING LHLRAELTI++
Sbjct: 511 GNYTFTGGKAVGYRNLFGVPWTSFIAEDSQYFINGILHLRAELTIKR 557
May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.
Arabidopsis thaliana (taxid: 3702)
>sp|O82343|Y2626_ARATH BTB/POZ domain-containing protein At2g46260 OS=Arabidopsis thaliana GN=At2g46260 PE=2 SV=2 Back     alignment and function description
>sp|O04615|Y4116_ARATH BTB/POZ domain-containing protein At4g01160 OS=Arabidopsis thaliana GN=At4g01160 PE=3 SV=1 Back     alignment and function description
>sp|Q8NFY9|KBTB8_HUMAN Kelch repeat and BTB domain-containing protein 8 OS=Homo sapiens GN=KBTBD8 PE=2 SV=2 Back     alignment and function description
>sp|B1H285|KBTB8_RAT Kelch repeat and BTB domain-containing protein 8 OS=Rattus norvegicus GN=Kbtbd8 PE=2 SV=1 Back     alignment and function description
>sp|Q3UQV5|KBTB8_MOUSE Kelch repeat and BTB domain-containing protein 8 OS=Mus musculus GN=Kbtbd8 PE=2 SV=1 Back     alignment and function description
>sp|Q6TDP4|KLH17_HUMAN Kelch-like protein 17 OS=Homo sapiens GN=KLHL17 PE=2 SV=1 Back     alignment and function description
>sp|Q3ZB90|KBTBC_DANRE Kelch repeat and BTB domain-containing protein 12 OS=Danio rerio GN=kbtbd12 PE=2 SV=1 Back     alignment and function description
>sp|Q80TF4|KLH13_MOUSE Kelch-like protein 13 OS=Mus musculus GN=Klhl13 PE=2 SV=3 Back     alignment and function description
>sp|Q9Z2X8|KEAP1_MOUSE Kelch-like ECH-associated protein 1 OS=Mus musculus GN=Keap1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query582
147798263526 hypothetical protein VITISV_008241 [Viti 0.902 0.998 0.794 0.0
225454420553 PREDICTED: BTB/POZ domain-containing pro 0.932 0.981 0.745 0.0
255541774549 atpob1, putative [Ricinus communis] gi|2 0.929 0.985 0.740 0.0
224127832547 predicted protein [Populus trichocarpa] 0.927 0.987 0.736 0.0
224064139556 predicted protein [Populus trichocarpa] 0.932 0.976 0.725 0.0
224072075561 predicted protein [Populus trichocarpa] 0.951 0.987 0.724 0.0
356573187553 PREDICTED: BTB/POZ domain-containing pro 0.931 0.980 0.732 0.0
356506034553 PREDICTED: BTB/POZ domain-containing pro 0.931 0.980 0.730 0.0
449432076553 PREDICTED: BTB/POZ domain-containing pro 0.932 0.981 0.720 0.0
307136357552 ATPOB protein binding [Cucumis melo subs 0.929 0.980 0.721 0.0
>gi|147798263|emb|CAN63457.1| hypothetical protein VITISV_008241 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  909 bits (2348), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 448/564 (79%), Positives = 480/564 (85%), Gaps = 39/564 (6%)

Query: 19  SSGLPDSDFGFAFNDSNFSDRVLRIEIMPDLPDSKSDGDACSSIADWARNRKRRREEIKK 78
           +  + DSDF FAFNDSNFSDR+LRIEI+ DLP+SK DG+ C+SIADWARNRKRRREEIKK
Sbjct: 2   AGSVSDSDFAFAFNDSNFSDRLLRIEIIADLPESKGDGEGCNSIADWARNRKRRREEIKK 61

Query: 79  DTVDVLVQREQILQCNMPDTEDGVAYENQDDEPEAMVEESPADVGLNLKQCEEATGNIDP 138
           +    +   EQIL CNMPDTEDGVAYENQD+E  AM+EESP          +EA  + D 
Sbjct: 62  ENAVDVHHEEQILNCNMPDTEDGVAYENQDEEAVAMIEESPPG--------DEAGHSSDS 113

Query: 139 AWSMDLSTVLRVKTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQL 198
           +W MD STVLRVKT+HISSPILAAKSPFFYK                            L
Sbjct: 114 SWGMDCSTVLRVKTLHISSPILAAKSPFFYK----------------------------L 145

Query: 199 FSNGMRESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASC 258
           FSNGMRESEQR+VTLRIHAS +      L F   +TLSTTTPTALLDVLMAADKFEVASC
Sbjct: 146 FSNGMRESEQRHVTLRIHASGKYTKTLSLFF---NTLSTTTPTALLDVLMAADKFEVASC 202

Query: 259 MRYCSRLLRNLPMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDISKFQEEVL 318
           MRYCSR+LRNLPMTCESALLYLDLPSSVLMA+AVQPLTD AKQFLA RYKD++KFQEEVL
Sbjct: 203 MRYCSRMLRNLPMTCESALLYLDLPSSVLMAEAVQPLTDAAKQFLAGRYKDVTKFQEEVL 262

Query: 319 NLPLAGIEAVLASDDLQIASEDAVYDFALKWARTHYPKLEERREILGSRLGRLIRFPYMT 378
           NLPLAGIEAVL+SDDLQ+ASEDAVYDF LKWAR HYPKLE+RREILGSRLGRLIRFPYMT
Sbjct: 263 NLPLAGIEAVLSSDDLQVASEDAVYDFVLKWARIHYPKLEDRREILGSRLGRLIRFPYMT 322

Query: 379 CRKLKKVLTCNDFDPELASKVVLESLFFKAETPYRQRALAAEEANSTYRRFVERAYKYRP 438
           CRKLKKVLTCNDFD ELASKVVLE+LFFKAE PYRQR+LAAEEA+S+YRRFVERAYKYRP
Sbjct: 323 CRKLKKVLTCNDFDTELASKVVLEALFFKAEAPYRQRSLAAEEASSSYRRFVERAYKYRP 382

Query: 439 VKVVEFELPRQQCVVYLDLKREECAHLFPAGRIYSQAFHLGGQGFFLSAHCNMDQQSSFH 498
           VKVVEFELPRQQCVVYLDLKREEC +LFPAGR+YSQAFHLGGQGFFLSAHCNMDQQSSFH
Sbjct: 383 VKVVEFELPRQQCVVYLDLKREECLNLFPAGRVYSQAFHLGGQGFFLSAHCNMDQQSSFH 442

Query: 499 CFGLFLGMQEKGSVSFAVDYEFAARIKPTEEYVSKYKGNYTFTGGKAVGYRNLFGIPWTA 558
           CFGLFLGMQEKGSV+FAVDYEFAAR KPTEEYVSKYKGNYTFTGGKAVGYRNLFGI W A
Sbjct: 443 CFGLFLGMQEKGSVTFAVDYEFAARSKPTEEYVSKYKGNYTFTGGKAVGYRNLFGIAWXA 502

Query: 559 FMADDSIYFINGNLHLRAELTIRQ 582
           FMADDS YFING LHLRAELTIRQ
Sbjct: 503 FMADDSHYFINGILHLRAELTIRQ 526

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225454420|ref|XP_002279915.1| PREDICTED: BTB/POZ domain-containing protein POB1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|255541774|ref|XP_002511951.1| atpob1, putative [Ricinus communis] gi|223549131|gb|EEF50620.1| atpob1, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224127832|ref|XP_002320175.1| predicted protein [Populus trichocarpa] gi|222860948|gb|EEE98490.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224064139|ref|XP_002301391.1| predicted protein [Populus trichocarpa] gi|222843117|gb|EEE80664.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224072075|ref|XP_002303620.1| predicted protein [Populus trichocarpa] gi|222841052|gb|EEE78599.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356573187|ref|XP_003554745.1| PREDICTED: BTB/POZ domain-containing protein POB1-like [Glycine max] Back     alignment and taxonomy information
>gi|356506034|ref|XP_003521793.1| PREDICTED: BTB/POZ domain-containing protein POB1-like [Glycine max] Back     alignment and taxonomy information
>gi|449432076|ref|XP_004133826.1| PREDICTED: BTB/POZ domain-containing protein At2g46260-like [Cucumis sativus] gi|449480287|ref|XP_004155851.1| PREDICTED: BTB/POZ domain-containing protein At2g46260-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|307136357|gb|ADN34171.1| ATPOB protein binding [Cucumis melo subsp. melo] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query582
TAIR|locus:2082827561 POB1 "POZ/BTB containin G-prot 0.659 0.684 0.815 3.3e-206
TAIR|locus:2063026561 LRB1 "light-response BTB 1" [A 0.659 0.684 0.812 4.3e-204
UNIPROTKB|A4FV78 606 KBTBD10 "Uncharacterized prote 0.359 0.344 0.273 2.2e-06
UNIPROTKB|O60662 606 KLHL41 "Kelch-like protein 41" 0.359 0.344 0.269 2.2e-06
UNIPROTKB|F1PMV5 650 KBTBD10 "Uncharacterized prote 0.359 0.321 0.273 3.2e-06
UNIPROTKB|Q6TDP4 642 KLHL17 "Kelch-like protein 17" 0.283 0.257 0.280 4e-06
UNIPROTKB|F1N1V7 634 KLHL22 "Uncharacterized protei 0.333 0.305 0.240 8.3e-06
MGI|MGI:2678948 640 Klhl17 "kelch-like 17" [Mus mu 0.283 0.257 0.285 8.4e-06
RGD|708444 640 Klhl17 "kelch-like family memb 0.283 0.257 0.285 8.4e-06
MGI|MGI:2661430 599 Kbtbd8 "kelch repeat and BTB ( 0.292 0.283 0.25 4.4e-05
TAIR|locus:2082827 POB1 "POZ/BTB containin G-protein 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1643 (583.4 bits), Expect = 3.3e-206, Sum P(2) = 3.3e-206
 Identities = 313/384 (81%), Positives = 346/384 (90%)

Query:   199 FSNGMRESEQRYVTLRIHASEEAALMELLNFMYXXXXXXXXXXXXXDVLMAADKFEVASC 258
             FSNGMRESEQR+VTLRI+ASEEAALMELLNFMY             DVLMAADKFEVASC
Sbjct:   174 FSNGMRESEQRHVTLRINASEEAALMELLNFMYSNAVSVTTAPALLDVLMAADKFEVASC 233

Query:   259 MRYCSRLLRNLPMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDISKFQEEVL 318
             MRYCSRLLRN+PMT ESALLYL+LPSSVLMA AVQPLTD AKQFLAARYKDI+KF EEV+
Sbjct:   234 MRYCSRLLRNMPMTPESALLYLELPSSVLMAKAVQPLTDAAKQFLAARYKDITKFHEEVM 293

Query:   319 NLPLAGIEAVLASDDLQIASEDAVYDFALKWARTHYPKLEERREILGSRLGRLIRFPYMT 378
             +LPLAGIEA+L+SD+LQIASEDAVYDF LKWAR  YP LEERREILGSRL   IRFP+MT
Sbjct:   294 SLPLAGIEAILSSDELQIASEDAVYDFILKWARAQYPCLEERREILGSRLALSIRFPFMT 353

Query:   379 CRKLKKVLTCNDFDPELASKVVLESLFFKAETPYRQRALAAEEANSTYRRFVERAYKYRP 438
             CRKLKKVLTC+DF+ E+ASK+VLE+LFFKAE P+RQR+LA+EE+ S  RR +ERAYKYRP
Sbjct:   354 CRKLKKVLTCSDFEHEIASKLVLEALFFKAEAPHRQRSLASEESASLNRRLIERAYKYRP 413

Query:   439 VKVVEFELPRQQCVVYLDLKREECAHLFPAGRIYSQAFHLGGQGFFLSAHCNMDQQSSFH 498
             VKVVEFELPR QCVVYLDLKREEC  LFP+GR+YSQAFHLGGQGFFLSAHCNMDQQSSFH
Sbjct:   414 VKVVEFELPRPQCVVYLDLKREECGGLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFH 473

Query:   499 CFGLFLGMQEKGSVSFAVDYEFAARIKPTEEYVSKYKGNYTFTGGKAVGYRNLFGIPWTA 558
             CFGLFLGMQEKGSVSF VDYEF+AR KP E+++SKYKGNYTFTGGKAVGYRNLFG+PWT+
Sbjct:   474 CFGLFLGMQEKGSVSFGVDYEFSARSKPAEDFISKYKGNYTFTGGKAVGYRNLFGVPWTS 533

Query:   559 FMADDSIYFINGNLHLRAELTIRQ 582
             F+A+DS YFING LHLRAELTI++
Sbjct:   534 FIAEDSQYFINGILHLRAELTIKR 557
GO:0005737 "cytoplasm" evidence=ISM
GO:0009954 "proximal/distal pattern formation" evidence=RCA
GO:0010227 "floral organ abscission" evidence=RCA
GO:0048439 "flower morphogenesis" evidence=RCA
GO:0005515 "protein binding" evidence=IPI
GO:0005634 "nucleus" evidence=IDA
GO:0010114 "response to red light" evidence=IGI
GO:0042803 "protein homodimerization activity" evidence=IPI
GO:0046982 "protein heterodimerization activity" evidence=IPI
TAIR|locus:2063026 LRB1 "light-response BTB 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|A4FV78 KBTBD10 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|O60662 KLHL41 "Kelch-like protein 41" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1PMV5 KBTBD10 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q6TDP4 KLHL17 "Kelch-like protein 17" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1N1V7 KLHL22 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:2678948 Klhl17 "kelch-like 17" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|708444 Klhl17 "kelch-like family member 17" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:2661430 Kbtbd8 "kelch repeat and BTB (POZ) domain containing 8" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O82343Y2626_ARATHNo assigned EC number0.71250.93120.9661nono
Q9FPW6POB1_ARATHNo assigned EC number0.71720.93290.9679yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_fgenesh4_pm.C_LG_XIV0160
hypothetical protein (548 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query582
smart00875101 smart00875, BACK, BTB And C-terminal Kelch 8e-10
pfam07707101 pfam07707, BACK, BTB And C-terminal Kelch 7e-09
smart0022597 smart00225, BTB, Broad-Complex, Tramtrack and Bric 7e-06
PHA03098 534 PHA03098, PHA03098, kelch-like protein; Provisiona 5e-05
>gnl|CDD|197943 smart00875, BACK, BTB And C-terminal Kelch Back     alignment and domain information 
 Score = 55.8 bits (135), Expect = 8e-10
 Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 5/86 (5%)

Query: 293 QPLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFALKWART 352
           + L + A +F+   + ++S   EE L LPL  +  +L+SDDL ++SE+ V++  L+W + 
Sbjct: 14  EELAEKALRFILQNFSEVSS-SEEFLELPLEQLLELLSSDDLNVSSEEEVFEAVLRWVKH 72

Query: 353 HYPKLEERREILGSRLGRLIRFPYMT 378
                E+RRE L   L   +R P ++
Sbjct: 73  D---PEKRREHL-PELLEHVRLPLLS 94

The BACK domain is found juxtaposed to the BTB domain; they are separated by as little as two residues. Length = 101
>gnl|CDD|149006 pfam07707, BACK, BTB And C-terminal Kelch Back     alignment and domain information
>gnl|CDD|197585 smart00225, BTB, Broad-Complex, Tramtrack and Bric a brac Back     alignment and domain information
>gnl|CDD|222983 PHA03098, PHA03098, kelch-like protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 582
KOG4441 571 consensus Proteins containing BTB/POZ and Kelch do 100.0
PHA02713 557 hypothetical protein; Provisional 100.0
PHA02790480 Kelch-like protein; Provisional 100.0
PHA03098534 kelch-like protein; Provisional 100.0
KOG4350 620 consensus Uncharacterized conserved protein, conta 99.95
KOG2075521 consensus Topoisomerase TOP1-interacting protein B 99.85
PF07707103 BACK: BTB And C-terminal Kelch; InterPro: IPR01170 99.72
KOG4682488 consensus Uncharacterized conserved protein, conta 99.69
KOG4441571 consensus Proteins containing BTB/POZ and Kelch do 99.63
smart00875101 BACK BTB And C-terminal Kelch. The BACK domain is 99.61
PF00651111 BTB: BTB/POZ domain; InterPro: IPR013069 The BTB ( 99.57
KOG4591280 consensus Uncharacterized conserved protein, conta 99.54
smart0022590 BTB Broad-Complex, Tramtrack and Bric a brac. Doma 99.46
PHA02713557 hypothetical protein; Provisional 99.42
PHA02790480 Kelch-like protein; Provisional 99.4
KOG0783 1267 consensus Uncharacterized conserved protein, conta 99.27
PHA03098 534 kelch-like protein; Provisional 99.2
TIGR03547346 muta_rot_YjhT mutatrotase, YjhT family. Members of 99.05
PLN02153341 epithiospecifier protein 98.87
TIGR03547 346 muta_rot_YjhT mutatrotase, YjhT family. Members of 98.85
PRK14131376 N-acetylneuraminic acid mutarotase; Provisional 98.81
PLN02193470 nitrile-specifier protein 98.78
TIGR03548323 mutarot_permut cyclically-permuted mutatrotase fam 98.77
TIGR03548323 mutarot_permut cyclically-permuted mutatrotase fam 98.76
PLN02153 341 epithiospecifier protein 98.75
PLN02193 470 nitrile-specifier protein 98.6
PRK14131 376 N-acetylneuraminic acid mutarotase; Provisional 98.52
KOG0783 1267 consensus Uncharacterized conserved protein, conta 97.96
PF1396450 Kelch_6: Kelch motif 97.65
KOG1987297 consensus Speckle-type POZ protein SPOP and relate 97.45
KOG4693 392 consensus Uncharacterized conserved protein, conta 97.4
PF0134447 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is 97.37
KOG0379 482 consensus Kelch repeat-containing proteins [Genera 97.35
KOG2838401 consensus Uncharacterized conserved protein, conta 97.27
KOG0511516 consensus Ankyrin repeat protein [General function 97.27
KOG0379 482 consensus Kelch repeat-containing proteins [Genera 97.16
KOG2838401 consensus Uncharacterized conserved protein, conta 96.66
KOG4693 392 consensus Uncharacterized conserved protein, conta 96.56
PF0221494 BTB_2: BTB/POZ domain; InterPro: IPR003131 Potassi 96.53
smart0061247 Kelch Kelch domain. 96.37
KOG4152 830 consensus Host cell transcription factor HCFC1 [Ce 96.36
PF0764649 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is 96.1
smart0061247 Kelch Kelch domain. 96.08
PF11822317 DUF3342: Domain of unknown function (DUF3342); Int 95.75
KOG2716230 consensus Polymerase delta-interacting protein PDI 95.69
KOG1230 521 consensus Protein containing repeated kelch motifs 95.67
KOG1230 521 consensus Protein containing repeated kelch motifs 95.37
PF1341849 Kelch_4: Galactose oxidase, central domain; PDB: 2 94.71
KOG1665302 consensus AFH1-interacting protein FIP2, contains 94.23
KOG3473112 consensus RNA polymerase II transcription elongati 92.87
KOG4152 830 consensus Host cell transcription factor HCFC1 [Ce 92.11
PF1396450 Kelch_6: Kelch motif 92.05
smart00512104 Skp1 Found in Skp1 protein family. Family of Skp1 90.99
PF1385442 Kelch_5: Kelch motif 89.9
PF1341549 Kelch_3: Galactose oxidase, central domain 89.72
KOG1724162 consensus SCF ubiquitin ligase, Skp1 component [Po 87.35
cd03779147 MATH_TRAF1 Tumor Necrosis Factor Receptor (TNFR) A 86.34
KOG2714465 consensus SETA binding protein SB1 and related pro 85.7
PF0134447 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is 85.7
cd03781154 MATH_TRAF4 Tumor Necrosis Factor Receptor (TNFR)-A 85.16
PLN02772 398 guanylate kinase 83.86
PF1341549 Kelch_3: Galactose oxidase, central domain 83.4
cd03776147 MATH_TRAF6 Tumor Necrosis Factor Receptor (TNFR)-A 82.91
PF11822317 DUF3342: Domain of unknown function (DUF3342); Int 82.68
cd03774139 MATH_SPOP Speckle-type POZ protein (SPOP) family, 81.61
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only] Back     alignment and domain information 
Probab=100.00  E-value=2e-62  Score=547.91  Aligned_cols=383  Identities=21%  Similarity=0.328  Sum_probs=352.9

Q ss_pred             eecCchhHHHhHHHHHHHhcCCCCCCCCceeEEEEEE--EEEeeeeeccccCCccccccccccccccchhhhHHHHHHHH
Q 007977          115 VEESPADVGLNLKQCEEATGNIDPAWSMDLSTVLRVK--TVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVIL  192 (582)
Q Consensus       115 ~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~DV~l~v~--~f~aHr~ILaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~  192 (582)
                      ....+.|....+++|+.+|+     .+.+|||++.++  +|+|||.||||+||||++                       
T Consensus        13 ~~~~~~h~~~~l~~l~~lr~-----~~~lcDv~L~v~~~~~~aHR~VLAa~S~YFra-----------------------   64 (571)
T KOG4441|consen   13 EFTDPSHSKFLLQGLNELRE-----EGLLCDVTLLVGDREFPAHRVVLAACSPYFRA-----------------------   64 (571)
T ss_pred             ccccHHHHHHHHHHHHHHHH-----hCCCceEEEEECCeeechHHHHHHhccHHHHH-----------------------
Confidence            34578899999999999998     788999999994  899999999999999999                       


Q ss_pred             HHHHHhhccCcccCCccEEEEecCCCCHHHHHHHHhcccCCccccCccchHHHHHHhhchhhhhhhhhhhhhhcccCcCC
Q 007977          193 CIFLQLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMT  272 (582)
Q Consensus       193 ~~~~~mf~~~~~Es~~~~v~l~~~~v~~~~f~~lL~fiYTg~l~i~~~~~v~~ll~aAd~l~v~~L~~~C~~~L~~l~l~  272 (582)
                           ||+++++|+.+++|.|.  ++++.+++.+++|+||+++.++. +|+++||.||++||++.+.+.|++||++ +++
T Consensus        65 -----MFt~~l~e~~~~~i~l~--~v~~~~l~~ll~y~Yt~~i~i~~-~nVq~ll~aA~~lQi~~v~~~C~~fL~~-~l~  135 (571)
T KOG4441|consen   65 -----MFTSGLKESKQKEINLE--GVDPETLELLLDYAYTGKLEISE-DNVQELLEAASLLQIPEVVDACCEFLES-QLD  135 (571)
T ss_pred             -----HhcCCcccccceEEEEe--cCCHHHHHHHHHHhhcceEEech-HhHHHHHHHHHHhhhHHHHHHHHHHHHh-cCC
Confidence                 99999999999999998  89999999999999999999999 9999999999999999999999999999 899


Q ss_pred             ccchhhhccccchhhhhhhhhhHHHHHHHHHHHhhhhhhhhhHhhcCCCHHHHHHHhcCCCccccchhhHHHHHHHHHhh
Q 007977          273 CESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFALKWART  352 (582)
Q Consensus       273 ~~n~~~~l~la~~~~~~~~~~~L~~~~~~fi~~~f~~v~~~~~~f~~L~~~~l~~lL~sd~L~V~sE~~Vf~aVl~Wi~~  352 (582)
                      ++||+.+..+|+.|    .|.+|.+.+..|+..||.++.+ ++||++||.+.+..||++|+|+|.+|.+||+++++|++|
T Consensus       136 ~~Nclgi~~~a~~~----~~~~L~~~a~~~i~~~F~~v~~-~eefl~L~~~~l~~ll~~d~l~v~~E~~vf~a~~~Wv~~  210 (571)
T KOG4441|consen  136 PSNCLGIRRFAELH----SCTELLEVADEYILQHFAEVSK-TEEFLLLSLEELIGLLSSDDLNVDSEEEVFEAAMRWVKH  210 (571)
T ss_pred             HHHHHHHHHHHHhc----CcHHHHHHHHHHHHHHHHHHhc-cHHhhCCCHHHHHhhccccCCCcCCHHHHHHHHHHHHhc
Confidence            99999999999998    7999999999999999999999 999999999999999999999999999999999999999


Q ss_pred             cCCChhhHHhhhcccccccccCCCCCHHHHhhhcccCCCC--chHHHHHHHHHHhhhccchhhhhhhcccccccccc-cc
Q 007977          353 HYPKLEERREILGSRLGRLIRFPYMTCRKLKKVLTCNDFD--PELASKVVLESLFFKAETPYRQRALAAEEANSTYR-RF  429 (582)
Q Consensus       353 d~~~~~~R~~~l~~~LL~~VRfplls~~~L~~~v~~~~l~--~~~~~~ll~eA~~~h~~~p~~q~~l~s~~t~~~pR-~~  429 (582)
                      |   .+.|++++ ++||++||||+|++.+|.+.+...++.  ++.|+.++.+|++||. .|.+++.++.+++++  | ..
T Consensus       211 d---~~~R~~~~-~~ll~~vr~~ll~~~~l~~~v~~~~~~~~~~~c~~~l~ea~~~~~-~~~~~~~~~~~~t~~--r~~~  283 (571)
T KOG4441|consen  211 D---FEEREEHL-PALLEAVRLPLLPPQFLVEIVESEPLIKRDSACRDLLDEAKKYHL-LPQRRPVMQSPRTRP--RRSV  283 (571)
T ss_pred             C---HhhHHHHH-HHHHHhcCccCCCHHHHHHHHhhhhhhccCHHHHHHHHHHHHHhh-CcccCccccCCCccc--CcCC
Confidence            9   77899999 999999999999999999999988875  7899999999999998 788888889998876  7 45


Q ss_pred             ceeEEEeec-------CceEEeeeCccCeEEE---ccccccceeEEeeCCeeeceeEEEcccc---------cccCccCC
Q 007977          430 VERAYKYRP-------VKVVEFELPRQQCVVY---LDLKREECAHLFPAGRIYSQAFHLGGQG---------FFLSAHCN  490 (582)
Q Consensus       430 ~~~l~v~~~-------~~~ve~ydP~~~~W~~---L~~~R~~~~vavl~g~IYn~iYviGG~g---------~~~dp~~n  490 (582)
                      .+.++++|+       .+.+|+|||.++.|..   |+.+|..+++++++|+|    |++||+.         +.|||++|
T Consensus       284 ~~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~~~r~~~~~~~~~~~l----Yv~GG~~~~~~~l~~ve~YD~~~~  359 (571)
T KOG4441|consen  284 SGKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMPSPRCRVGVAVLNGKL----YVVGGYDSGSDRLSSVERYDPRTN  359 (571)
T ss_pred             CCeEEEECCCCCCCcccceeEEecCCcCcEeecCCCCcccccccEEEECCEE----EEEccccCCCcccceEEEecCCCC
Confidence            577887654       3589999999999998   89999999999999555    5999982         34699987


Q ss_pred             -------ccCCCCceEEEEEccc-------cCCCCccccccccceeeccC---CCeeecCCCCceeecceeEeccccccc
Q 007977          491 -------MDQQSSFHCFGLFLGM-------QEKGSVSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAVGYRNLFG  553 (582)
Q Consensus       491 -------M~~~R~~~~~~vl~G~-------~~~~~lssvV~~~~aErYdP---~W~~va~m~~~~~~~g~~avg~~~~~~  553 (582)
                             |+++|+.+++++++|+       ++...+.++      |||||   +|+.++||+.++..+|+++++      
T Consensus       360 ~W~~~a~M~~~R~~~~v~~l~g~iYavGG~dg~~~l~sv------E~YDp~~~~W~~va~m~~~r~~~gv~~~~------  427 (571)
T KOG4441|consen  360 QWTPVAPMNTKRSDFGVAVLDGKLYAVGGFDGEKSLNSV------ECYDPVTNKWTPVAPMLTRRSGHGVAVLG------  427 (571)
T ss_pred             ceeccCCccCccccceeEEECCEEEEEeccccccccccE------EEecCCCCcccccCCCCcceeeeEEEEEC------
Confidence                   9999999999987776       667778886      99999   999999999999999988887      


Q ss_pred             ccccceecCCceEEEcCe
Q 007977          554 IPWTAFMADDSIYFINGN  571 (582)
Q Consensus       554 ~~~~~~~~~~~~~~i~~~  571 (582)
                               ..+|.|||.
T Consensus       428 ---------g~iYi~GG~  436 (571)
T KOG4441|consen  428 ---------GKLYIIGGG  436 (571)
T ss_pred             ---------CEEEEEcCc
Confidence                     578999885

>PHA02713 hypothetical protein; Provisional Back     alignment and domain information
>PHA02790 Kelch-like protein; Provisional Back     alignment and domain information
>PHA03098 kelch-like protein; Provisional Back     alignment and domain information
>KOG4350 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only] Back     alignment and domain information
>KOG2075 consensus Topoisomerase TOP1-interacting protein BTBD1 [Function unknown] Back     alignment and domain information
>PF07707 BACK: BTB And C-terminal Kelch; InterPro: IPR011705 This domain is found associated with (IPR000210 from INTERPRO) and (IPR006652 from INTERPRO) Back     alignment and domain information
>KOG4682 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only] Back     alignment and domain information
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only] Back     alignment and domain information
>smart00875 BACK BTB And C-terminal Kelch Back     alignment and domain information
>PF00651 BTB: BTB/POZ domain; InterPro: IPR013069 The BTB (for BR-C, ttk and bab) [] or POZ (for Pox virus and Zinc finger) [] domain is present near the N terminus of a fraction of zinc finger (IPR007087 from INTERPRO) proteins and in proteins that contain the IPR006652 from INTERPRO motif such as Kelch and a family of pox virus proteins Back     alignment and domain information
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only] Back     alignment and domain information
>smart00225 BTB Broad-Complex, Tramtrack and Bric a brac Back     alignment and domain information
>PHA02713 hypothetical protein; Provisional Back     alignment and domain information
>PHA02790 Kelch-like protein; Provisional Back     alignment and domain information
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown] Back     alignment and domain information
>PHA03098 kelch-like protein; Provisional Back     alignment and domain information
>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family Back     alignment and domain information
>PLN02153 epithiospecifier protein Back     alignment and domain information
>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family Back     alignment and domain information
>PRK14131 N-acetylneuraminic acid mutarotase; Provisional Back     alignment and domain information
>PLN02193 nitrile-specifier protein Back     alignment and domain information
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein Back     alignment and domain information
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein Back     alignment and domain information
>PLN02153 epithiospecifier protein Back     alignment and domain information
>PLN02193 nitrile-specifier protein Back     alignment and domain information
>PRK14131 N-acetylneuraminic acid mutarotase; Provisional Back     alignment and domain information
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown] Back     alignment and domain information
>PF13964 Kelch_6: Kelch motif Back     alignment and domain information
>KOG1987 consensus Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains [Cell cycle control, cell division, chromosome partitioning; General function prediction only] Back     alignment and domain information
>KOG4693 consensus Uncharacterized conserved protein, contains kelch repeat [General function prediction only] Back     alignment and domain information
>PF01344 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] Back     alignment and domain information
>KOG0379 consensus Kelch repeat-containing proteins [General function prediction only] Back     alignment and domain information
>KOG2838 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only] Back     alignment and domain information
>KOG0511 consensus Ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>KOG0379 consensus Kelch repeat-containing proteins [General function prediction only] Back     alignment and domain information
>KOG2838 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only] Back     alignment and domain information
>KOG4693 consensus Uncharacterized conserved protein, contains kelch repeat [General function prediction only] Back     alignment and domain information
>PF02214 BTB_2: BTB/POZ domain; InterPro: IPR003131 Potassium channels are the most diverse group of the ion channel family [, ] Back     alignment and domain information
>smart00612 Kelch Kelch domain Back     alignment and domain information
>KOG4152 consensus Host cell transcription factor HCFC1 [Cell cycle control, cell division, chromosome partitioning; Transcription] Back     alignment and domain information
>PF07646 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] Back     alignment and domain information
>smart00612 Kelch Kelch domain Back     alignment and domain information
>PF11822 DUF3342: Domain of unknown function (DUF3342); InterPro: IPR021777 This family of proteins are functionally uncharacterised Back     alignment and domain information
>KOG2716 consensus Polymerase delta-interacting protein PDIP1 and related proteins, contain BTB/POZ domain [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG1230 consensus Protein containing repeated kelch motifs [General function prediction only] Back     alignment and domain information
>KOG1230 consensus Protein containing repeated kelch motifs [General function prediction only] Back     alignment and domain information
>PF13418 Kelch_4: Galactose oxidase, central domain; PDB: 2UVK_B Back     alignment and domain information
>KOG1665 consensus AFH1-interacting protein FIP2, contains BTB/POZ domain and pentapeptide repeats [General function prediction only] Back     alignment and domain information
>KOG3473 consensus RNA polymerase II transcription elongation factor Elongin/SIII, subunit elongin C [Transcription] Back     alignment and domain information
>KOG4152 consensus Host cell transcription factor HCFC1 [Cell cycle control, cell division, chromosome partitioning; Transcription] Back     alignment and domain information
>PF13964 Kelch_6: Kelch motif Back     alignment and domain information
>smart00512 Skp1 Found in Skp1 protein family Back     alignment and domain information
>PF13854 Kelch_5: Kelch motif Back     alignment and domain information
>PF13415 Kelch_3: Galactose oxidase, central domain Back     alignment and domain information
>KOG1724 consensus SCF ubiquitin ligase, Skp1 component [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd03779 MATH_TRAF1 Tumor Necrosis Factor Receptor (TNFR) Associated Factor (TRAF) family, TRAF1 subfamily, TRAF domain, C-terminal MATH subdomain; TRAF molecules serve as adapter proteins that link TNFRs and downstream kinase cascades resulting in the activation of transcription factors and the regulation of cell survival, proliferation and stress responses Back     alignment and domain information
>KOG2714 consensus SETA binding protein SB1 and related proteins, contain BTB/POZ domain [General function prediction only] Back     alignment and domain information
>PF01344 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] Back     alignment and domain information
>cd03781 MATH_TRAF4 Tumor Necrosis Factor Receptor (TNFR)-Associated Factor (TRAF) family, TRAF4 subfamily, TRAF domain, C-terminal MATH subdomain; composed of proteins with similarity to human TRAF4, including the Drosophila protein DTRAF1 Back     alignment and domain information
>PLN02772 guanylate kinase Back     alignment and domain information
>PF13415 Kelch_3: Galactose oxidase, central domain Back     alignment and domain information
>cd03776 MATH_TRAF6 Tumor Necrosis Factor Receptor (TNFR)-Associated Factor (TRAF) family, TRAF6 subfamily, TRAF domain, C-terminal MATH subdomain; composed of proteins with similarity to human TRAF6, including the Drosophila protein DTRAF2 Back     alignment and domain information
>PF11822 DUF3342: Domain of unknown function (DUF3342); InterPro: IPR021777 This family of proteins are functionally uncharacterised Back     alignment and domain information
>cd03774 MATH_SPOP Speckle-type POZ protein (SPOP) family, MATH domain; composed of proteins with similarity to human SPOP Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query582
3i3n_A279 Kelch-like protein 11; structural genomics, BTB, K 4e-23
3hve_A256 Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, dis 8e-22
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-11
2if5_A120 Zinc finger and BTB domain-containing protein 7A; 4e-09
1r29_A127 B-cell lymphoma 6 protein; BTB domain, transcripti 8e-08
3htm_A172 Speckle-type POZ protein; BTB, SPOP, ubiquitin, li 2e-07
2vkp_A109 BTB/POZ domain-containing protein 6; protein-bindi 3e-07
3hqi_A312 Speckle-type POZ protein; SPOP, ubiquitin, puckere 3e-07
2ppi_A144 Gigaxonin; BTB domain, protein degradation, struct 9e-07
4eoz_A145 Speckle-type POZ protein; E3 ubiquitin ligase, nuc 1e-06
2vpk_A116 Myoneurin; transcription regulation, transcription 1e-06
3ohu_A125 Transcription regulator protein BACH2; BTB/POZ dom 2e-06
2yy9_A135 Zinc finger and BTB domain-containing protein 48; 5e-06
2ihc_A124 Transcription regulator protein BACH1; BRIC-A-BRAC 1e-05
3b84_A119 Zinc finger and BTB domain-containing protein 48; 2e-05
1buo_A121 POZ domain, protein (promyelocytic leukemia zinc f 2e-05
2z8h_A138 Transcription regulator protein BACH1; BTB, POZ, d 4e-05
2eqx_A105 Kelch repeat and BTB domain-containing protein 4; 1e-04
3fkc_A116 Transcriptional regulator kaiso; zinc finger and B 3e-04
3ga1_A129 Nucleus accumbens-associated protein 1; BTB/POZ do 4e-04
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} Length = 279 Back     alignment and structure
 Score = 98.5 bits (246), Expect = 4e-23
 Identities = 43/205 (20%), Positives = 79/205 (38%), Gaps = 23/205 (11%)

Query: 195 FLQLFSNGMRESEQRYVTLRIHASEE----AALMELLNFMYSSTLSTTTPTALLDVLMAA 250
           F  L S    ES    V +R  +SE       +  ++ +MY+  +  +T +   +VL  A
Sbjct: 61  FTPLLSGQFSESRSGRVEMRKWSSEPGPEPDTVEAVIEYMYTGRIRVSTGSVH-EVLELA 119

Query: 251 DKFEVASCMRYCSR-LLRNL-PMTCESALLYLDLPSSVLMADA--VQPLTDTAKQFLAAR 306
           D+F +     +C   L + L    C      + +     +A    +  L   A   +   
Sbjct: 120 DRFLLIRLKEFCGEFLKKKLHLSNC------VAI---HSLAHMYTLSQLALKAADMIRRN 170

Query: 307 YKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFALKWARTHYPKLEERREILGS 366
           +  + +  EE   LP   I   L+  ++ + SE+ +++  LKW +      EER      
Sbjct: 171 FHKVIQ-DEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQ-R--NAEERERYF-E 225

Query: 367 RLGRLIRFPYMTCRKLKKVLTCNDF 391
            L +L+R   M    L + +     
Sbjct: 226 ELFKLLRLSQMKPTYLTRHVKPERL 250
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B Length = 256 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A Length = 120 Back     alignment and structure
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A Length = 127 Back     alignment and structure
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens} Length = 172 Back     alignment and structure
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens} Length = 109 Back     alignment and structure
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A Length = 312 Back     alignment and structure
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens} Length = 144 Back     alignment and structure
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens} Length = 145 Back     alignment and structure
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens} Length = 116 Back     alignment and structure
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} PDB: 3ohv_A Length = 125 Back     alignment and structure
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus} Length = 135 Back     alignment and structure
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens} Length = 124 Back     alignment and structure
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens} Length = 119 Back     alignment and structure
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A Length = 121 Back     alignment and structure
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus} Length = 138 Back     alignment and structure
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 105 Back     alignment and structure
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A Length = 116 Back     alignment and structure
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens} Length = 129 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query582
3i3n_A279 Kelch-like protein 11; structural genomics, BTB, K 100.0
3hve_A256 Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, dis 100.0
3hqi_A312 Speckle-type POZ protein; SPOP, ubiquitin, puckere 99.96
3htm_A172 Speckle-type POZ protein; BTB, SPOP, ubiquitin, li 99.93
4eoz_A145 Speckle-type POZ protein; E3 ubiquitin ligase, nuc 99.88
2if5_A120 Zinc finger and BTB domain-containing protein 7A; 99.84
2z8h_A138 Transcription regulator protein BACH1; BTB, POZ, d 99.84
1r29_A127 B-cell lymphoma 6 protein; BTB domain, transcripti 99.83
3ohu_A125 Transcription regulator protein BACH2; BTB/POZ dom 99.82
2ppi_A144 Gigaxonin; BTB domain, protein degradation, struct 99.82
3b84_A119 Zinc finger and BTB domain-containing protein 48; 99.82
2yy9_A135 Zinc finger and BTB domain-containing protein 48; 99.82
2vpk_A116 Myoneurin; transcription regulation, transcription 99.81
2ihc_A124 Transcription regulator protein BACH1; BRIC-A-BRAC 99.81
1buo_A121 POZ domain, protein (promyelocytic leukemia zinc f 99.8
2vkp_A109 BTB/POZ domain-containing protein 6; protein-bindi 99.79
3ga1_A129 Nucleus accumbens-associated protein 1; BTB/POZ do 99.78
2q81_A119 MIZ-1 protein; BTB/POZ domain, transcription; HET: 99.78
3m5b_A119 Zinc finger and BTB domain-containing protein 32; 99.77
3fkc_A116 Transcriptional regulator kaiso; zinc finger and B 99.72
2eqx_A105 Kelch repeat and BTB domain-containing protein 4; 99.7
2xn4_A 302 Kelch-like protein 2; structural protein, cytoskel 99.23
3ii7_A 306 Kelch-like protein 7; protein-binding, kelch-repea 99.21
2ast_A159 S-phase kinase-associated protein 1A; SCF-substrat 99.18
4asc_A315 Kelch repeat and BTB domain-containing protein 5; 99.17
3ii7_A306 Kelch-like protein 7; protein-binding, kelch-repea 99.14
2vpj_A 301 Kelch-like protein 12; adaptor protein, WNT signal 99.14
1zgk_A308 Kelch-like ECH-associated protein 1; beta-propelle 99.13
2woz_A318 Kelch repeat and BTB domain-containing protein 10; 99.13
1zgk_A308 Kelch-like ECH-associated protein 1; beta-propelle 99.12
2xn4_A302 Kelch-like protein 2; structural protein, cytoskel 99.11
4asc_A315 Kelch repeat and BTB domain-containing protein 5; 99.11
2vpj_A301 Kelch-like protein 12; adaptor protein, WNT signal 99.1
2zwa_A 695 Leucine carboxyl methyltransferase 2; HET: SAH CIT 99.1
2woz_A 318 Kelch repeat and BTB domain-containing protein 10; 99.07
4ajy_C97 Transcription elongation factor B polypeptide 1; E 98.87
2uvk_A 357 YJHT; unknown function, hypothetical protein, sial 98.82
2uvk_A357 YJHT; unknown function, hypothetical protein, sial 98.8
2zwa_A695 Leucine carboxyl methyltransferase 2; HET: SAH CIT 98.62
2p1m_A160 SKP1-like protein 1A; F-BOX, leucine rich repeat, 98.62
1fs1_B141 SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, le 98.61
1k3i_A 656 Galactose oxidase precursor; blade beta propeller, 98.28
1k3i_A 656 Galactose oxidase precursor; blade beta propeller, 98.15
1hv2_A99 Elongin C, ELC1; protein-peptide complex, signalin 97.75
2fnj_C96 Transcription elongation factor B polypeptide 1; b 97.63
3v7d_A169 Suppressor of kinetochore protein 1; WD 40 domain, 97.47
3drz_A107 BTB/POZ domain-containing protein KCTD5; potassium 97.44
1by2_A119 MAC-2 binding protein; extracellular module, scave 97.22
2oya_A102 Macrophage receptor marco; extracellular matrix, s 96.65
1vcb_B112 Protein (elongin C); tumor suppressor, cancer, ubi 96.64
3drx_A202 BTB/POZ domain-containing protein KCTD5; golgi, gr 95.78
3kvt_A115 Potassium channel protein SHAW; tetramerization do 94.98
2jop_A131 T-cell surface glycoprotein CD5; domain 1, scaveng 94.8
1s1g_A124 Potassium voltage-gated channel subfamily D membe; 92.78
2xrc_A565 Human complement factor I; immune system, hydrolas 91.77
1nn7_A105 Potassium channel KV4.2; teteramerization domain, 91.42
2nz0_B140 Potassium voltage-gated channel subfamily D membe; 89.71
1lb6_A160 TNF receptor-associated factor 6; TRAF6-CD40 compl 85.57
1t1d_A100 Protein (potassium channel KV1.1); potassium chann 85.39
3ivv_A145 Speckle-type POZ protein; protein binding, nucleus 83.42
2ja4_A101 T-cell surface glycoprotein CD5; SRCR, membrane, p 81.29
4ghu_A198 TNF receptor-associated factor 3; alpha/beta, inna 80.99
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A Back     alignment and structure
Probab=100.00  E-value=2.3e-44  Score=367.88  Aligned_cols=248  Identities=20%  Similarity=0.333  Sum_probs=227.1

Q ss_pred             cCchhHHHhHHHHHHHhcCCCCCCCCceeEEEEEE-----EEEeeeeeccccCCccccccccccccccchhhhHHHHHHH
Q 007977          117 ESPADVGLNLKQCEEATGNIDPAWSMDLSTVLRVK-----TVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVI  191 (582)
Q Consensus       117 ~~~~~~~~~l~~l~~~~~~~~~~~~~~~DV~l~v~-----~f~aHr~ILaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~  191 (582)
                      ..+.|...+++.|++++.     .+.+|||+|.++     +|+|||.|||++|+||++                      
T Consensus        11 ~~~~h~~~ll~~l~~l~~-----~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~----------------------   63 (279)
T 3i3n_A           11 ECSSHCSELSWRQNEQRR-----QGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTP----------------------   63 (279)
T ss_dssp             ECTTHHHHHHHHHHHHHH-----HTTTCCEEEECC----CEEEECHHHHHHHCTTSGG----------------------
T ss_pred             CCHhHHHHHHHHHHHHHh-----cCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHH----------------------
Confidence            467889999999999998     677999999984     699999999999999999                      


Q ss_pred             HHHHHHhhccCcccCCccEEEEec----CCCCHHHHHHHHhcccCCccccCccchHHHHHHhhchhhhhhhhhhhhhhcc
Q 007977          192 LCIFLQLFSNGMRESEQRYVTLRI----HASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLR  267 (582)
Q Consensus       192 ~~~~~~mf~~~~~Es~~~~v~l~~----~~v~~~~f~~lL~fiYTg~l~i~~~~~v~~ll~aAd~l~v~~L~~~C~~~L~  267 (582)
                            ||+++|+|+.+..|+|++    +++++++|+.+|+|||||++.++. +++.+++.+|++|+++.|++.|+++|.
T Consensus        64 ------mf~~~~~e~~~~~i~l~~~~~~~~v~~~~f~~ll~~~Ytg~~~i~~-~~v~~ll~~A~~l~i~~L~~~c~~~L~  136 (279)
T 3i3n_A           64 ------LLSGQFSESRSGRVEMRKWSSEPGPEPDTVEAVIEYMYTGRIRVST-GSVHEVLELADRFLLIRLKEFCGEFLK  136 (279)
T ss_dssp             ------GCCC--------EEECCCCSSTTCSCHHHHHHHHHHHHHSEEEEET-TTHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred             ------HhcCCCccccCCeEEeccccccCCCCHHHHHHHHHhhCcCCcccCH-HHHHHHHHHHHHHCcHHHHHHHHHHHH
Confidence                  999999999999999862    279999999999999999999998 999999999999999999999999999


Q ss_pred             cCcCCccchhhhccccchhhhhhhhhhHHHHHHHHHHHhhhhhhhhhHhhcCCCHHHHHHHhcCCCccccchhhHHHHHH
Q 007977          268 NLPMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFAL  347 (582)
Q Consensus       268 ~l~l~~~n~~~~l~la~~~~~~~~~~~L~~~~~~fi~~~f~~v~~~~~~f~~L~~~~l~~lL~sd~L~V~sE~~Vf~aVl  347 (582)
                      + .++++||+.++.+|+.|    ++..|.+.|.+||.+||.++.+ +++|.+||.+.+..||++|+|+|.+|.+||++++
T Consensus       137 ~-~l~~~n~~~i~~~A~~~----~~~~L~~~~~~~i~~~f~~v~~-~~~f~~L~~~~l~~lL~~d~L~v~sE~~vf~av~  210 (279)
T 3i3n_A          137 K-KLHLSNCVAIHSLAHMY----TLSQLALKAADMIRRNFHKVIQ-DEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVL  210 (279)
T ss_dssp             H-HCCTTTHHHHHHHHHHT----TCHHHHHHHHHHHHHTHHHHTT-SSGGGGSCHHHHHHHHTCSSCCCSCHHHHHHHHH
T ss_pred             H-cCCcchHHHHHHHHHHc----CcHHHHHHHHHHHHHHHHHHhc-CcChhcCCHHHHHHHhcCcCCCCCCHHHHHHHHH
Confidence            9 89999999999999998    7899999999999999999999 9999999999999999999999999999999999


Q ss_pred             HHHhhcCCChhhHHhhhcccccccccCCCCCHHHHhhhcccCCCC--chHHHHHHHHHHhhhc
Q 007977          348 KWARTHYPKLEERREILGSRLGRLIRFPYMTCRKLKKVLTCNDFD--PELASKVVLESLFFKA  408 (582)
Q Consensus       348 ~Wi~~d~~~~~~R~~~l~~~LL~~VRfplls~~~L~~~v~~~~l~--~~~~~~ll~eA~~~h~  408 (582)
                      +|++|+   +++|++++ ++||++||||+|++++|.+.+..+++.  ++.|++++.+|++||.
T Consensus       211 ~W~~~~---~~~r~~~~-~~ll~~VRf~l~~~~~L~~~v~~~~l~~~~~~c~~~l~ea~~~~~  269 (279)
T 3i3n_A          211 KWVQRN---AEERERYF-EELFKLLRLSQMKPTYLTRHVKPERLVANNEVCVKLVADAVERHA  269 (279)
T ss_dssp             HHHHTT---HHHHTTTH-HHHHTTSCGGGSCHHHHHHTTTTSHHHHTCHHHHHHHHHHHHHHH
T ss_pred             HHHHcC---HHHHHHHH-HHHHHhcCCCCCCHHHHHHHhhccchhcCCHHHHHHHHHHHHhcc
Confidence            999999   88999998 899999999999999999999888775  7899999999999998
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B Back     alignment and structure
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A Back     alignment and structure
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens} Back     alignment and structure
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens} Back     alignment and structure
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A Back     alignment and structure
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus} Back     alignment and structure
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A Back     alignment and structure
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A Back     alignment and structure
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens} Back     alignment and structure
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens} Back     alignment and structure
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus} Back     alignment and structure
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens} Back     alignment and structure
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens} Back     alignment and structure
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A Back     alignment and structure
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens} Back     alignment and structure
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens} Back     alignment and structure
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A Back     alignment and structure
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0 Back     alignment and structure
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A Back     alignment and structure
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Back     alignment and structure
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Back     alignment and structure
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Back     alignment and structure
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Back     alignment and structure
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Back     alignment and structure
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Back     alignment and structure
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Back     alignment and structure
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Back     alignment and structure
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Back     alignment and structure
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Back     alignment and structure
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Back     alignment and structure
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Back     alignment and structure
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Back     alignment and structure
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E* Back     alignment and structure
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Back     alignment and structure
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Back     alignment and structure
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Back     alignment and structure
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A* Back     alignment and structure
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D Back     alignment and structure
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A Back     alignment and structure
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A Back     alignment and structure
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1 Back     alignment and structure
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B Back     alignment and structure
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A* Back     alignment and structure
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens} Back     alignment and structure
>1by2_A MAC-2 binding protein; extracellular module, scavenger receptor, tumour-associated extracellular matrix, glycosylated protein; HET: NAG; 2.00A {Homo sapiens} SCOP: d.170.1.1 Back     alignment and structure
>2oya_A Macrophage receptor marco; extracellular matrix, scavenger receptor cysteine-rich (SRCR macrophage receptor, ligand binding, basic cluster; 1.77A {Mus musculus} PDB: 2oy3_A Back     alignment and structure
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1 Back     alignment and structure
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A Back     alignment and structure
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2 Back     alignment and structure
>2jop_A T-cell surface glycoprotein CD5; domain 1, scavenger receptor cysteine rich, SRCR, immune system; NMR {Homo sapiens} PDB: 2jp0_A Back     alignment and structure
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2 Back     alignment and structure
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens} Back     alignment and structure
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2 Back     alignment and structure
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A Back     alignment and structure
>1lb6_A TNF receptor-associated factor 6; TRAF6-CD40 complex, signaling protein; 1.80A {Homo sapiens} SCOP: b.8.1.1 PDB: 1lb5_A 1lb4_A Back     alignment and structure
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A Back     alignment and structure
>3ivv_A Speckle-type POZ protein; protein binding, nucleus, UBL conjugation pathway, ligase; 1.25A {Homo sapiens} SCOP: b.8.1.1 PDB: 3ivq_A 3ivb_A 3hsv_A 3hqh_A 3hqm_A 3hql_A 2cr2_A Back     alignment and structure
>2ja4_A T-cell surface glycoprotein CD5; SRCR, membrane, polymorphism, crystallography, transmembrane, innate immunity, phosphorylation, immune system; 2.21A {Homo sapiens} PDB: 2ott_X Back     alignment and structure
>4ghu_A TNF receptor-associated factor 3; alpha/beta, innate immunity, IFN pathway, immune system; 2.20A {Mus musculus} PDB: 2gkw_A 1kzz_A 1l0a_A 1zms_A 1rf3_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query582
d1r29a_122 B-cell lymphoma 6 (Bcl6) protein BTB domain {Human 99.84
d1buoa_121 Promyelocytic leukaemia zinc finger (PLZF) protein 99.83
d1zgka1 288 Kelch-like ECH-associated protein 1, KEAP1 {Human 98.98
d1zgka1288 Kelch-like ECH-associated protein 1, KEAP1 {Human 98.77
d1k3ia3387 Galactose oxidase, central domain {Fungi (Fusarium 98.51
d1k3ia3 387 Galactose oxidase, central domain {Fungi (Fusarium 97.97
d1nn7a_105 Potassium channel kv4.2 {Rat (Rattus norvegicus) [ 95.95
d3kvta_103 akv3.1 voltage-gated potassium channel {California 95.89
d2c9wc196 Elongin C {Human (Homo sapiens) [TaxId: 9606]} 95.71
d1hv2a_99 Elongin C {Baker's yeast (Saccharomyces cerevisiae 95.64
d1by2a_116 M2BP {Human (Homo sapiens) [TaxId: 9606]} 93.85
d1t1da_100 Shaker potassium channel {California sea hare (Apl 93.09
d1fs1b155 Cyclin A/CDK2-associated p45, Skp1 {Human (Homo sa 81.82
>d1r29a_ d.42.1.1 (A:) B-cell lymphoma 6 (Bcl6) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: POZ domain
superfamily: POZ domain
family: BTB/POZ domain
domain: B-cell lymphoma 6 (Bcl6) protein BTB domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=6.1e-22  Score=175.90  Aligned_cols=115  Identities=17%  Similarity=0.270  Sum_probs=105.4

Q ss_pred             CchhHHHhHHHHHHHhcCCCCCCCCceeEEEEE--EEEEeeeeeccccCCccccccccccccccchhhhHHHHHHHHHHH
Q 007977          118 SPADVGLNLKQCEEATGNIDPAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIF  195 (582)
Q Consensus       118 ~~~~~~~~l~~l~~~~~~~~~~~~~~~DV~l~v--~~f~aHr~ILaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (582)
                      -|.|...+++.|+++++     .+.+|||++.+  ++|+|||+|||++||||++                          
T Consensus         5 ~~~h~~~ll~~l~~l~~-----~~~~~Dv~l~v~~~~~~~Hk~vLa~~S~~F~~--------------------------   53 (122)
T d1r29a_           5 FTRHASDVLLNLNRLRS-----RDILTDVVIVVSREQFRAHKTVLMACSGLFYS--------------------------   53 (122)
T ss_dssp             CTTHHHHHHHHHHHHHH-----TTCSCCEEEEETTEEEEECHHHHHHHCHHHHH--------------------------
T ss_pred             cchHHHHHHHHHHHHHh-----cCCCeEEEEEECCEEEEEehHHhhhCCHHHHH--------------------------
Confidence            46888999999999998     66799999999  5899999999999999999                          


Q ss_pred             HHhhccCcccCCccEEEEecCCCCHHHHHHHHhcccCCccccCccchHHHHHHhhchhhhhhhhhhhhhhccc
Q 007977          196 LQLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRN  268 (582)
Q Consensus       196 ~~mf~~~~~Es~~~~v~l~~~~v~~~~f~~lL~fiYTg~l~i~~~~~v~~ll~aAd~l~v~~L~~~C~~~L~~  268 (582)
                        ||.+++.|+.+..+.++  ++++++|+.+|+|+|||++.++. +++.+++.+|++|+++.|++.|.+||+.
T Consensus        54 --~f~~~~~e~~~~~~~~~--~v~~~~f~~ll~~~Ytg~~~i~~-~~v~~ll~~A~~l~i~~L~~~C~~~L~~  121 (122)
T d1r29a_          54 --IFTDQLKRNLSVINLDP--EINPEGFNILLDFMYTSRLNLRE-GNIMAVMATAMYLQMEHVVDTCRKFIKA  121 (122)
T ss_dssp             --HHTSTTTTTCSEEECCT--TSCHHHHHHHHHHHHHSCCCCCT-TTHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred             --Hhccchhhhcceeeeec--ccCHHHHHHHHhhhcCCeecCch-hhHHHHHHHHHHHCcHHHHHHHHHHHHh
Confidence              99999988776655554  89999999999999999999998 8999999999999999999999999975
>d1buoa_ d.42.1.1 (A:) Promyelocytic leukaemia zinc finger (PLZF) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} Back     information, alignment and structure
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} Back     information, alignment and structure
>d1nn7a_ d.42.1.2 (A:) Potassium channel kv4.2 {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d3kvta_ d.42.1.2 (A:) akv3.1 voltage-gated potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]} Back     information, alignment and structure
>d2c9wc1 d.42.1.1 (C:17-112) Elongin C {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1hv2a_ d.42.1.1 (A:) Elongin C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1by2a_ d.170.1.1 (A:) M2BP {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1t1da_ d.42.1.2 (A:) Shaker potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]} Back     information, alignment and structure
>d1fs1b1 a.157.1.1 (B:86-140) Cyclin A/CDK2-associated p45, Skp1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure