Citrus Sinensis ID: 007986

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580--
MNSINLLGNSTMKLSGRFLIPCRNASFSAFIVIKHPNHHCLSNKSSTFCFKFDQINQIQAHPYKISGFQRILKDTQKPLCVFGPSCGQIRVNSRPFSVVSTKSRGLYLVASRVASNVSSFSTSVETRVNDGNFERIYVQNGLNVKPLVVERIDKDENIVGQEESCVEVNDDEKVGKDNLEGVRTKREETEIEKEAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQVSSDIVTYIVLAF
ccccccEEcccccccccEEcccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccEEEEEcccccccccccccEEEEEccccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccEEEEEcccccccccccccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHcccccccccccccccccccccEEEcccccccccccEEccccccccccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccccccccEEEccccccccccccccccccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHccccHHcHHHHccccccccccccccccccccccccHHHHccccccccEEEccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccEEEccccccccccHHcccccccccccccccccHHHHHHHHHHHHHHHHHHcc
cccEEEEEEcccccccEEEEEcccccccccccccccccccccccccccccccccccEEEcccccccccEEEEcccccccEcccccccccccccccEEEEccccccEEEEEEccHHccccccccEEEEcccccccEEEEccccccccEEEEEEEccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHEccccEEEEEEccccccccccccHEEHHccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEEEEEcccccccEEEcccccHHHEEEcccccHHHHHHHHHHHHHHHcccHHHHccHHHHHHHHHHHHHHHccccccccEEEccccccHEcccccccccHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHcEEcHHHHHHHHccccHHccccHHcccccccccccHHHHHHccccccEEEEccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccEEEccccccccEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHc
mnsinllgnstmklsgrflipcrnasfSAFIVikhpnhhclsnksstfcfkfdqinqiqahpykisgfQRILkdtqkplcvfgpscgqirvnsrpfsvvstksrGLYLVASRVASNVSSFSTSVETRVNDGNFERIYVQnglnvkplvveridkdenivgqeescvevnddekvgkdnlegvrtkreETEIEKEAWRLLQEAVVTYCespigtvaandpgdkqplnydqvfIRDFVPSALAFLLKGEGEIVRNFLLHTLQlqswektvdcyspgqglmpasfkvrnvplesnkfeevldpdfgesaigrvapvdsgLWWIILLRAYGKitgdyalqeRVDVQTGIKLIMNLCladgfdmfpsllvtdgscmidrrmgihghpLEIQALFYTALRCsremltvsdgsgsnnLVRAINNRLSALSFHIREYYWVDMKKINEIYRYkteeystdatnkfniypeqipswlmdwipeeggylignlqpahmdfrFFTLGNLWSIVSslgtpkqnESILNLIEAKWddlvghmplkicypalesedwriitgsdpkntpwsyhnggswptlLWQVSSDIVTYIVLAF
MNSINLLGNSTMKLSGRFLIPCRNASFSAFIVIKHPNHHCLSNKSSTFCFKFDQINQIQAHPYKISGFQRILKDTQKPLCVFgpscgqirvnsrpfsvvsTKSRGLYLVASrvasnvssfstsvetrvndgNFERIyvqnglnvkplvveridkdenivgqeescvevnddekvgkdnlegvrtkreeteiekEAWRLLQEAVVTYCESPIGtvaandpgdkQPLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGrvapvdsglWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTvsdgsgsnnLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTeeystdatnkFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQVSSDIVTYIVLAF
MNSINLLGNSTMKLSGRFLIPCRNASFSAFIVIKHPNHHCLSNKSSTFCFKFDQINQIQAHPYKISGFQRILKDTQKPLCVFGPSCGQIRVNSRPFSVVSTKSRGLYLVASRVASNVSSFSTSVETRVNDGNFERIYVQNGLNVKPLVVERIDKDENIVGQEESCVEVNDDEKVGKDNLEGVrtkreeteiekeAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQVSSDIVTYIVLAF
**********TMKLSGRFLIPCRNASFSAFIVIKHPNHHCLSNKSSTFCFKFDQINQIQAHPYKISGFQRILKDTQKPLCVFGPSCGQIRVNSRPFSVVSTKSRGLYLVASRVASNVSSFSTSVETRVNDGNFERIYVQNGLNVKPLVVERIDKDENIVG********************************KEAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQVSSDIVTYIVLA*
****NL*GNSTMKLSGRFLIPCRNASFSAFIV***********************NQIQAHPYKISGFQRILKDTQKPLCVFGPSCG**********************A*R*AS******************************************************************************EAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQVSSDIVTYIVLAF
MNSINLLGNSTMKLSGRFLIPCRNASFSAFIVIKHPNHHCLSNKSSTFCFKFDQINQIQAHPYKISGFQRILKDTQKPLCVFGPSCGQIRVNSRPFSVVSTKSRGLYLVASRVASNVSSFSTSVETRVNDGNFERIYVQNGLNVKPLVVERIDKDENIVGQEESCVEVNDDEKVGKDNLEGVRTKREETEIEKEAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQVSSDIVTYIVLAF
*NSINLLGNSTMKLSGRFLIPCRNASFSAFIVIKHPNHHCLSNKSSTFCFKFDQINQIQAHPYKISGFQRILKDTQKPLCVFGPSCGQIRVNSRPFSVVSTKSRGLYLVASRVASNVSSFSTSVETRVNDGNFERIYVQNGLNVKPLVVERIDKD*********************************TEIEKEAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQVSSDIVTYIVLAF
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooo
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MNSINLLGNSTMKLSGRFLIPCRNASFSAFIVIKHPNHHCLSNKSSTFCFKFDQINQIQAHPYKISGFQRILKDTQKPLCVFGPSCGQIRVNSRPFSVVSTKSRGLYLVASRVASNVSSFSTSVETRVNDGNFERIYVQNGLNVKPLVVERIDKDENIVGQEESCVEVNDDEKVGKDNLEGVRTKREETEIEKEAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQVSSDIVTYIVLAF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query582
375300672682 neutral/alkaline invertase [Manihot escu 0.955 0.815 0.747 0.0
255542946 685 beta-fructofuranosidase, putative [Ricin 0.969 0.823 0.745 0.0
449490800601 PREDICTED: uncharacterized LOC101218389 0.826 0.800 0.833 0.0
359487679673 PREDICTED: uncharacterized protein LOC10 0.962 0.832 0.752 0.0
449454129589 PREDICTED: uncharacterized protein LOC10 0.790 0.780 0.855 0.0
163913884674 putative neutral invertase [Vitis vinife 0.962 0.830 0.751 0.0
163913886674 putative neutral invertase [Vitis vinife 0.962 0.830 0.749 0.0
296089802647 unnamed protein product [Vitis vinifera] 0.926 0.833 0.743 0.0
147773544673 hypothetical protein VITISV_029106 [Viti 0.963 0.833 0.723 0.0
225432057673 PREDICTED: uncharacterized protein LOC10 0.963 0.833 0.723 0.0
>gi|375300672|gb|AFA46813.1| neutral/alkaline invertase [Manihot esculenta] Back     alignment and taxonomy information
 Score =  875 bits (2261), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 442/591 (74%), Positives = 482/591 (81%), Gaps = 35/591 (5%)

Query: 1   MNSINLLGNSTMKLSGRFLIPCRNASFSAFIVIKHPNHHCLSNKSSTFCFKFDQINQIQA 60
           M ++  L NSTMK S RFLI  R      F   K+  HH L+   S     FD   Q   
Sbjct: 1   MATLIFLSNSTMKPSCRFLITRRTPGI--FGSAKY--HHTLTGDISRNEISFDHNKQFSE 56

Query: 61  HPYKISGFQRILKDTQKPLCV----FGP-------SCGQIRVNSRPFSVVSTKSRGLYLV 109
           +P+   GF+ I+  TQK  C+    FGP       SCG  R   R        SRG+ +V
Sbjct: 57  YPFGFFGFRSIINSTQKIFCIPIANFGPPRLVSGSSCGD-RTRRR-------ASRGVSVV 108

Query: 110 ASRVASNVSSFSTSVETRVNDGNFERIYVQNGLNVKPLVVERIDKDENIVGQEESCVEV- 168
           AS VAS V  +STSVETRVND NFERIYV NG+ VKPLVVE+IDKDE+++G+  S + V 
Sbjct: 109 AS-VASEVKEYSTSVETRVNDKNFERIYVHNGIGVKPLVVEKIDKDEDVLGEAASRIGVV 167

Query: 169 --NDDEKVGKDNLEGVR------TKREETEIEKEAWRLLQEAVVTYCESPIGTVAANDPG 220
             ++ EKV  +NLEGV+      + REE+EIEKEAW+LL +A+VTYC SP+GTVAAND G
Sbjct: 168 VPDEGEKVNTENLEGVKGVEIGNSWREESEIEKEAWKLLNDAIVTYCGSPVGTVAANDQG 227

Query: 221 DKQPLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPA 280
           DKQPLNYDQVFIRDFVPSALAFLL+GEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPA
Sbjct: 228 DKQPLNYDQVFIRDFVPSALAFLLRGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPA 287

Query: 281 SFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVD 340
           SFKVR VPL+ NK EEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGD  LQERVD
Sbjct: 288 SFKVRTVPLDGNKSEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDNTLQERVD 347

Query: 341 VQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREML 400
           VQ GIKLI+NLCL DGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFY+ALRCSREML
Sbjct: 348 VQIGIKLILNLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYSALRCSREML 407

Query: 401 TVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYP 460
           TV+D  GS NLVR INNRLSALSFHIREYYWVD+KKINEIYRYKTEEYS DATNKFNIYP
Sbjct: 408 TVND--GSKNLVRTINNRLSALSFHIREYYWVDIKKINEIYRYKTEEYSMDATNKFNIYP 465

Query: 461 EQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAK 520
           EQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWS++SSLGTPKQN++ILNLIEAK
Sbjct: 466 EQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSVISSLGTPKQNKAILNLIEAK 525

Query: 521 WDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQVS 571
           WDDLVG MPLKICYPALE EDWRIITGSDPKNTPWSYHNGGSWPTLLWQ +
Sbjct: 526 WDDLVGRMPLKICYPALEDEDWRIITGSDPKNTPWSYHNGGSWPTLLWQFT 576

Source: Manihot esculenta

Species: Manihot esculenta

Genus: Manihot

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255542946|ref|XP_002512536.1| beta-fructofuranosidase, putative [Ricinus communis] gi|223548497|gb|EEF49988.1| beta-fructofuranosidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449490800|ref|XP_004158710.1| PREDICTED: uncharacterized LOC101218389 [Cucumis sativus] Back     alignment and taxonomy information
>gi|359487679|ref|XP_002277312.2| PREDICTED: uncharacterized protein LOC100254513 [Vitis vinifera] Back     alignment and taxonomy information
>gi|449454129|ref|XP_004144808.1| PREDICTED: uncharacterized protein LOC101218389 [Cucumis sativus] Back     alignment and taxonomy information
>gi|163913884|emb|CAP59645.1| putative neutral invertase [Vitis vinifera] Back     alignment and taxonomy information
>gi|163913886|emb|CAP59646.1| putative neutral invertase [Vitis vinifera] Back     alignment and taxonomy information
>gi|296089802|emb|CBI39621.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147773544|emb|CAN63178.1| hypothetical protein VITISV_029106 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225432057|ref|XP_002280462.1| PREDICTED: uncharacterized protein LOC100233037 [Vitis vinifera] gi|296083207|emb|CBI22843.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query582
TAIR|locus:2074434659 INVH "invertase H" [Arabidopsi 0.769 0.679 0.769 3.6e-198
TAIR|locus:2027600616 A/N-InvA "alkaline/neutral inv 0.695 0.657 0.819 4.1e-197
TAIR|locus:2084329664 A/N-InvC "alkaline/neutral inv 0.946 0.829 0.638 4.9e-188
TAIR|locus:2171112617 INV-E "alkaline/neutral invert 0.644 0.607 0.781 1.8e-167
TAIR|locus:2116870571 A/N-InvB "alkaline/neutral inv 0.639 0.651 0.595 2e-127
TAIR|locus:2133737558 CINV2 "cytosolic invertase 2" 0.640 0.668 0.589 9.9e-126
TAIR|locus:2014676551 CINV1 "cytosolic invertase 1" 0.640 0.676 0.595 1.9e-124
TAIR|locus:2016064499 A/N-InvF "alkaline/neutral inv 0.640 0.747 0.582 5.7e-123
TAIR|locus:2199690534 A/N-InvD "alkaline/neutral inv 0.640 0.698 0.576 1.9e-122
TAIR|locus:2074434 INVH "invertase H" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1889 (670.0 bits), Expect = 3.6e-198, Sum P(2) = 3.6e-198
 Identities = 357/464 (76%), Positives = 397/464 (85%)

Query:   109 VASRVASNVSSFSTSVETRVNDGNFERIYVQNGLNVKPLVVERIDKDENIVGQEESCVEV 168
             V ++V S   S S S  T  ND   ++IY +NGLNVKPLVVER+ +DE     EE+   V
Sbjct:   101 VTAQVVSEARSHSAST-TCANDTTLDQIYTKNGLNVKPLVVERLKRDEK---DEEA---V 153

Query:   169 NDDEK-VGKDNLEGVXXXXXXXXXXXXAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNY 227
             N+DE+ V +D  EGV            AWRLL++++VTYC+SP+GTVAA DP D  P NY
Sbjct:   154 NEDEEGVKRDGFEGVKCNDVEEE----AWRLLRDSIVTYCDSPVGTVAAKDPTDTTPSNY 209

Query:   228 DQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNV 287
             DQVFIRDFVPSALAFLLKGE EIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVR +
Sbjct:   210 DQVFIRDFVPSALAFLLKGESEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTL 269

Query:   288 PLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIKL 347
             PLE +KFEEVLDPDFGE+AIGRVAPVDSGLWWIILLRAYGKITGDY+LQER+DVQTGIK+
Sbjct:   270 PLEEDKFEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKITGDYSLQERIDVQTGIKM 329

Query:   348 IMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSG 407
             I NLCLADGFDMFP+LLVTDGSCMIDRRMGIHGHPLEIQALFY+ALR SREM+TV+D S 
Sbjct:   330 IANLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALRSSREMITVNDSS- 388

Query:   408 SNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWL 467
               N+++ I+NRLSALSFHIRE YWVD  KINEIYRYKTEEYS DATNKFNIYPEQ+  WL
Sbjct:   389 -KNIIKTISNRLSALSFHIRENYWVDKNKINEIYRYKTEEYSMDATNKFNIYPEQVSPWL 447

Query:   468 MDWIPE--EGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDDLV 525
             MDW+PE  + G+LIGNLQPAHMDFRFFTLGNLWSI+SSLGTPKQN++ILNL+E KWDDLV
Sbjct:   448 MDWVPESPDSGFLIGNLQPAHMDFRFFTLGNLWSIISSLGTPKQNQAILNLVEEKWDDLV 507

Query:   526 GHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQ 569
             GHMPLKICYPALES +W IITGSDPKNTPWSYHNGGSWPTLLWQ
Sbjct:   508 GHMPLKICYPALESSEWHIITGSDPKNTPWSYHNGGSWPTLLWQ 551
GO:0003824 "catalytic activity" evidence=IEA
GO:0004564 "beta-fructofuranosidase activity" evidence=ISS
TAIR|locus:2027600 A/N-InvA "alkaline/neutral invertase A" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2084329 A/N-InvC "alkaline/neutral invertase C" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2171112 INV-E "alkaline/neutral invertase E" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2116870 A/N-InvB "alkaline/neutral invertase B" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2133737 CINV2 "cytosolic invertase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2014676 CINV1 "cytosolic invertase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2016064 A/N-InvF "alkaline/neutral invertase F" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2199690 A/N-InvD "alkaline/neutral invertase D" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
ni2
SubName- Full=Chromosome chr5 scaffold_64, whole genome shotgun sequence; (673 aa)
(Vitis vinifera)
Predicted Functional Partners:
CWINV
SubName- Full=Chromosome chr9 scaffold_7, whole genome shotgun sequence; (575 aa)
      • 0.481

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query582
pfam12899437 pfam12899, Glyco_hydro_100, Alkaline and neutral i 0.0
PLN02703618 PLN02703, PLN02703, beta-fructofuranosidase 0.0
PLN03005550 PLN03005, PLN03005, beta-fructofuranosidase 1e-177
PLN02973571 PLN02973, PLN02973, beta-fructofuranosidase 1e-173
>gnl|CDD|221840 pfam12899, Glyco_hydro_100, Alkaline and neutral invertase Back     alignment and domain information 
 Score =  722 bits (1867), Expect = 0.0
 Identities = 261/379 (68%), Positives = 308/379 (81%), Gaps = 6/379 (1%)

Query: 194 EAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKGEGEIVRN 253
           EAW LL++++V Y   P+GTVAA DP  +  LNYDQ FIRDFVPSALAFLLKG  EIVRN
Sbjct: 1   EAWELLEKSLVYYQGRPVGTVAALDPSAEDALNYDQCFIRDFVPSALAFLLKGRPEIVRN 60

Query: 254 FLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPV 313
           FLL TLQLQS EKTVDC+ PG+G+MPASFKV +   E    EE L  DFGE AIGRVAPV
Sbjct: 61  FLLETLQLQSQEKTVDCFEPGRGVMPASFKVLHDKDE----EETLIADFGERAIGRVAPV 116

Query: 314 DSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMID 373
           DSGLWWIILLRAY K TGDY+  E  DVQ GI+LI++LCL+D FDMFP+LLV DG+ MID
Sbjct: 117 DSGLWWIILLRAYVKATGDYSFAESPDVQRGIRLILDLCLSDRFDMFPTLLVPDGAFMID 176

Query: 374 RRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVD 433
           RRMG++GHPLEIQALFY ALRC+RE+L   +     +L+  I+NRL AL FHIREYYW+D
Sbjct: 177 RRMGVYGHPLEIQALFYGALRCARELLEPDEDGK--DLIERIDNRLRALRFHIREYYWLD 234

Query: 434 MKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFT 493
           + ++NEIYRYKTEEY  DA NKFNIYPE IP WL DW+PE GGYLIGNL P  MDFRFF+
Sbjct: 235 LDRLNEIYRYKTEEYGDDAVNKFNIYPESIPDWLFDWLPERGGYLIGNLGPGRMDFRFFS 294

Query: 494 LGNLWSIVSSLGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNT 553
           LGNL +I+SSL T +Q+++I++LIE +WDDL+G MP+KICYPALE E+WRI+TG DPKNT
Sbjct: 295 LGNLLAILSSLATEEQSQAIMDLIEERWDDLIGEMPMKICYPALEGEEWRIVTGCDPKNT 354

Query: 554 PWSYHNGGSWPTLLWQVSS 572
           PWSYHNGGSWP LLW +++
Sbjct: 355 PWSYHNGGSWPVLLWLLTA 373

This is a family of bacterial and plant alkaline and neutral invertases, EC:3.2.1.26, previously known as Invertase_neut pfam04853. Length = 437
>gnl|CDD|178306 PLN02703, PLN02703, beta-fructofuranosidase Back     alignment and domain information
>gnl|CDD|178582 PLN03005, PLN03005, beta-fructofuranosidase Back     alignment and domain information
>gnl|CDD|178556 PLN02973, PLN02973, beta-fructofuranosidase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 582
PF12899436 Glyco_hydro_100: Alkaline and neutral invertase; I 100.0
PLN02703618 beta-fructofuranosidase 100.0
PLN02973571 beta-fructofuranosidase 100.0
PLN03005550 beta-fructofuranosidase 100.0
TIGR01561575 gde_arch glycogen debranching enzyme, archaeal typ 100.0
PF06202370 GDE_C: Amylo-alpha-1,6-glucosidase ; InterPro: IPR 100.0
TIGR015311464 glyc_debranch glycogen debranching enzymye. glycog 100.0
COG3408641 GDB1 Glycogen debranching enzyme [Carbohydrate tra 100.0
PRK10137786 alpha-glucosidase; Provisional 99.89
KOG36251521 consensus Alpha amylase [Carbohydrate transport an 99.88
TIGR01577616 oligosac_amyl oligosaccharide amylase. The name of 99.68
PF05592509 Bac_rhamnosid: Bacterial alpha-L-rhamnosidase; Int 99.36
PRK13271569 treA trehalase; Provisional 99.24
PF04685365 DUF608: Protein of unknown function, DUF608; Inter 99.22
PLN02567554 alpha,alpha-trehalase 99.04
COG3459 1056 Cellobiose phosphorylase [Carbohydrate transport a 99.04
PF01204512 Trehalase: Trehalase; InterPro: IPR001661 O-Glycos 98.86
PRK13272542 treA trehalase; Provisional 98.82
COG3387612 SGA1 Glucoamylase and related glycosyl hydrolases 98.82
PRK13270549 treF trehalase; Provisional 98.69
TIGR01535648 glucan_glucosid glucan 1,4-alpha-glucosidase. Gluc 98.57
PF03200801 Glyco_hydro_63: Mannosyl oligosaccharide glucosida 98.06
COG1626558 TreA Neutral trehalase [Carbohydrate transport and 97.66
PF00723448 Glyco_hydro_15: Glycosyl hydrolases family 15; Int 97.44
PF06824424 DUF1237: Protein of unknown function (DUF1237); In 97.27
COG4354721 Predicted bile acid beta-glucosidase [Carbohydrate 97.05
KOG0602600 consensus Neutral trehalase [Carbohydrate transpor 96.43
COG3538434 Uncharacterized conserved protein [Function unknow 95.03
KOG2161849 consensus Glucosidase I [Carbohydrate transport an 94.86
KOG2119879 consensus Predicted bile acid beta-glucosidase [Ca 87.1
PF03632370 Glyco_hydro_65m: Glycosyl hydrolase family 65 cent 83.09
>PF12899 Glyco_hydro_100: Alkaline and neutral invertase; InterPro: IPR024746 This is a family of endo-alpha-N-acetylgalactosaminidases Back     alignment and domain information 
Probab=100.00  E-value=2.7e-117  Score=928.79  Aligned_cols=377  Identities=70%  Similarity=1.281  Sum_probs=368.5

Q ss_pred             HHHHHHHHHhhhcccccCeeEeccCCCCCCCCCCCCcccchhHHHHHHHHhcCChHHHHHHHHHHHhhhhhhhhcccCCC
Q 007986          194 EAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSP  273 (582)
Q Consensus       194 ~A~~~Lr~~~v~~~~~p~GtlAA~~~~~~~a~nY~~vfGRD~~IS~lglL~~G~pEiar~~L~~la~lQs~~~tld~~~~  273 (582)
                      +||++|++++|+|+++|+||+||.|++..+++||++||.||+++|++++|+.|++|+|||||..+++||++++++|+|++
T Consensus         1 ~a~~~l~~s~v~~~g~pvGtvAa~d~~~~~~lNY~qvF~RDfvps~l~fL~~g~~eIVrnFL~~tl~Lq~~~~~~d~~~~   80 (436)
T PF12899_consen    1 EAWELLERSIVYYQGQPVGTVAALDPSAEEALNYDQVFVRDFVPSALAFLMKGEPEIVRNFLLETLQLQSWEKQVDCFKP   80 (436)
T ss_pred             ChHHHHhhheEeeCCceeeeeeecCCcccccccccceEeecChHHHHHHHHcCCHHHHHHHHHHHHhhhhhhhhcccccc
Confidence            59999999999999999999999999777899999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCceeeccccCCCccccccccCCCCCCccCccCCCCcHHHHHHHHHHHHHHhCChhHHhhhhHHHHHHHHHHHhh
Q 007986          274 GQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCL  353 (582)
Q Consensus       274 ~~GliP~sfKI~h~~~r~~~ge~~l~pd~Ge~~i~~ygsVDAtLWfIIaL~~Y~k~TGD~~fl~~p~vq~~L~~IL~~~l  353 (582)
                      ++|+||+||||.|++     +++++.||||+.+|||+.+|||+|||||+|++|.++|||.+|.++|++|++|++||+.|+
T Consensus        81 g~G~mPaSFkv~~~~-----~~e~l~aDfGe~AIgRv~pVDs~~WWiillraY~k~tgD~s~~~~~~~Q~gi~liL~lcL  155 (436)
T PF12899_consen   81 GRGVMPASFKVLHEN-----EEETLIADFGERAIGRVAPVDSGLWWIILLRAYVKATGDYSLAESPEVQRGIRLILDLCL  155 (436)
T ss_pred             CCCcccceEEEecCC-----CCceEecCcchhhhccccCcccccHHHHHHHHHHHHhcchhhhhcHHHHHHHHHHHHHHc
Confidence            999999999999743     788999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCceeccCCCccccccccCCCcceehhHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHhhhcc
Q 007986          354 ADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVD  433 (582)
Q Consensus       354 ~~gfd~~p~Llv~Dg~~WmD~r~gr~G~pVEIQALwYnALr~aaeLa~~~g~~~~~~~a~~~~~ra~aLk~~f~~~FWld  433 (582)
                      +++||++|+|+||||++|+|||||++|||+|||||+|+||||+.+|+...++  .+++.+++.+|+.+|++|++++||+|
T Consensus       156 ~~~Fd~~PtLlvpDg~~MiDRrMgv~G~PlEiQ~Lf~~aLr~a~~ll~~~~~--~~~~~~~i~~rl~~L~~h~r~~yWld  233 (436)
T PF12899_consen  156 ADGFDMFPTLLVPDGACMIDRRMGVYGHPLEIQALFYMALRCARELLKPDEE--GKDLIERIDKRLHALSFHIREYYWLD  233 (436)
T ss_pred             ccccCCCceEEecCCceeecccccccCCcchHHHHHHHHHHHHHHhcCcccc--hhHHHHHHHHHHHHHHHHHHHHhccc
Confidence            9999999999999999999999999999999999999999999999987644  57899999999999999999999999


Q ss_pred             hhhhhhhhhccccccccccccccCCCCCCccccccccccCCCceeecccCCCccccccccccchhhhhcCCCCHHHHHHH
Q 007986          434 MKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESI  513 (582)
Q Consensus       434 ~~~l~~iyr~~te~y~~~a~n~fni~p~~ip~~l~d~l~~~gGYL~~~v~P~~~D~R~~alGNlLAI~~gLl~~eqa~~I  513 (582)
                      .++||+||||+||||+++|+|||||+|++||+||+|||+++|||++||++|++||||||++||+||+++||+|++|+++|
T Consensus       234 ~~~ln~iyr~~teey~~~a~N~fNi~p~~ip~wl~dwlp~~gGY~ignv~P~~~dfRff~lGNlLAiLsgLat~~qa~~I  313 (436)
T PF12899_consen  234 LKRLNEIYRYKTEEYGHTAVNKFNIYPDSIPDWLFDWLPEKGGYFIGNVSPARMDFRFFSLGNLLAILSGLATPEQAEAI  313 (436)
T ss_pred             HHHHHHHHhccHhhhhhhhhhcccCCcccchHHHHHhcccCCceeEeeccccccceeehhhhhHHHHHhcCCCHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhhhhccCCCceecCCCCCCCCceeeeCCCCCCCCCCCccCCCCccchHHHHHHHHHH
Q 007986          514 LNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQVSSDIVTY  577 (582)
Q Consensus       514 ld~i~~~w~eLltp~gLR~l~P~l~d~~Wr~~~~gd~~nrp~SYHNGgvWPwLLg~y~~A~lk~  577 (582)
                      +++|+++|++|.++||||+|+|||++++||++|++||+|+||||||||+||+|+|+|++|++|.
T Consensus       314 ~~lIe~~~~~L~g~mPlki~yPale~~eWri~tg~dpKN~PwsYHNGG~WP~LlW~~~aA~ik~  377 (436)
T PF12899_consen  314 MDLIEERWEDLVGPMPLKICYPALEGEEWRIYTGCDPKNTPWSYHNGGSWPVLLWFLTAALIKM  377 (436)
T ss_pred             HHHHHHHHhhhccccchhhccCCCCCCCCccccCcCcCccccccccCCCcHHHHHHHHHHHHHc
Confidence            9999999999999999999999999999999999999999999999999999999999999984

This is a unique enzyme that hydrolyses core 1-type O-glycan from glycoproteins. The proteins are produced in the gut-flora bacteria from Actinobacteria and Firmicutes [].; GO: 0033926 glycopeptide alpha-N-acetylgalactosaminidase activity
>PLN02703 beta-fructofuranosidase Back     alignment and domain information
>PLN02973 beta-fructofuranosidase Back     alignment and domain information
>PLN03005 beta-fructofuranosidase Back     alignment and domain information
>TIGR01561 gde_arch glycogen debranching enzyme, archaeal type, putative Back     alignment and domain information
>PF06202 GDE_C: Amylo-alpha-1,6-glucosidase ; InterPro: IPR010401 This family includes human glycogen branching enzyme P35573 from SWISSPROT Back     alignment and domain information
>TIGR01531 glyc_debranch glycogen debranching enzymye Back     alignment and domain information
>COG3408 GDB1 Glycogen debranching enzyme [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10137 alpha-glucosidase; Provisional Back     alignment and domain information
>KOG3625 consensus Alpha amylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR01577 oligosac_amyl oligosaccharide amylase Back     alignment and domain information
>PF05592 Bac_rhamnosid: Bacterial alpha-L-rhamnosidase; InterPro: IPR008902 This entry consists of bacterial rhamnosidase A and B enzymes Back     alignment and domain information
>PRK13271 treA trehalase; Provisional Back     alignment and domain information
>PF04685 DUF608: Protein of unknown function, DUF608; InterPro: IPR006775 This domain is found in non-lysosomal glucosylceramidases that catalyze the conversion of glucosylceramide to free glucose and ceramide [] Back     alignment and domain information
>PLN02567 alpha,alpha-trehalase Back     alignment and domain information
>COG3459 Cellobiose phosphorylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF01204 Trehalase: Trehalase; InterPro: IPR001661 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PRK13272 treA trehalase; Provisional Back     alignment and domain information
>COG3387 SGA1 Glucoamylase and related glycosyl hydrolases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK13270 treF trehalase; Provisional Back     alignment and domain information
>TIGR01535 glucan_glucosid glucan 1,4-alpha-glucosidase Back     alignment and domain information
>PF03200 Glyco_hydro_63: Mannosyl oligosaccharide glucosidase; InterPro: IPR004888 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG1626 TreA Neutral trehalase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF00723 Glyco_hydro_15: Glycosyl hydrolases family 15; InterPro: IPR011613 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF06824 DUF1237: Protein of unknown function (DUF1237); InterPro: IPR008313 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function Back     alignment and domain information
>COG4354 Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG0602 consensus Neutral trehalase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG3538 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>KOG2161 consensus Glucosidase I [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2119 consensus Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF03632 Glyco_hydro_65m: Glycosyl hydrolase family 65 central catalytic domain; InterPro: IPR005195 O-Glycosyl hydrolases 3 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query582
1v7w_A 807 Chitobiose phosphorylase; beta-sandwich, (alpha/al 3e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
>1v7w_A Chitobiose phosphorylase; beta-sandwich, (alpha/alpha)6 barrel, transferase; HET: NDG NAG; 1.60A {Vibrio proteolyticus} SCOP: a.102.1.4 b.30.5.3 PDB: 1v7v_A* 1v7x_A* Length = 807 Back     alignment and structure
 Score = 68.6 bits (167), Expect = 3e-12
 Identities = 40/341 (11%), Positives = 89/341 (26%), Gaps = 55/341 (16%)

Query: 233 RDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESN 292
           RD    A++       E+ R  ++  L+ Q                P      +V    +
Sbjct: 349 RDTAQDAISVPH-ANPEMTRKRIVDLLRGQVKAGYGLHLFDPDWFDPEK---EDVAPSKS 404

Query: 293 KFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYA-LQERVDVQTGIKLIMNL 351
                   D  +    +    D  LW I  +  Y   TG+ +   + +    G +  +  
Sbjct: 405 PTVVPTPSDEDKIHGIKDTCSDDHLWLIPTICKYVMETGETSFFDQMIPYADGGEASVYE 464

Query: 352 CLADGFDMFPSLLVTDGSCMI--------DRRMGIHGHPLEIQALFYTALRCSREMLTVS 403
            +    D   S      + +         D      G    +  L + AL   +E + ++
Sbjct: 465 HMKAALD--FSAEYVGQTGICKGLRADWNDCLNLGGGESSMVSFLHFWAL---QEFIDLA 519

Query: 404 DGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQI 463
              G +  V       + +      + W D                              
Sbjct: 520 KFLGKDQDVNTYTEMAANVREACETHLWDDEGG--------------------------- 552

Query: 464 PSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDD 523
             W +  + + G  +         + R     N  +++S L + ++ E  ++ ++     
Sbjct: 553 --WYIRGLTKNGDKIGT---AQQQEGRVHLESNTLAVLSGLASQERGEQAMDAVDEHLFS 607

Query: 524 LVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWP 564
             G       +     +   +              NG  + 
Sbjct: 608 PYGLHLNAPSFSTPNDDIGFVTR-----VYQGVKENGAIFS 643
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query582
1v7w_A 807 Chitobiose phosphorylase; beta-sandwich, (alpha/al 99.95
3qde_A 811 Cellobiose phosphorylase; cellulase, phosphate, tr 99.94
3rrs_A 822 Cellobiose phosphorylase; GH94, alpha barrel, disa 99.94
3c68_A761 Uncharacterized protein YGJK; GH63, processing alp 99.92
2z07_A420 Putative uncharacterized protein TTHA0978; unchara 99.92
2jg0_A535 Periplasmic trehalase; family 37, hydrolase, inhib 99.91
2okx_A 956 Rhamnosidase B; alpha barrel, glycoside hydrolase 99.78
3cih_A 739 Putative alpha-rhamnosidase; structural genomics, 99.75
1ulv_A 1020 Glucodextranase; GH family 15, (alpha-alpha)6-barr 99.45
1lf6_A684 Glucoamylase; (alpha/alpha) barrel, 6 alpha-helica 99.35
2p0v_A489 Hypothetical protein BT3781; alpha-beta protein, s 98.61
3qry_B426 Putative uncharacterized protein; alpha-alpha six 98.52
3qt9_A427 Putative uncharacterized protein CPE0426; alpha-al 98.43
2fba_A492 Glucoamylase Glu1; (alpha-alpha)6 barrel, TRIS, hy 98.37
3p2c_A463 Putative glycosyl hydrolase; structural genomics, 98.31
2vn4_A 599 Glucoamylase; hydrolase, carbohydrate binding, gly 98.24
1gai_A472 Glucoamylase-471; hydrolase, glycosidase, polysacc 98.17
1h54_A754 Maltose phosphorylase; hydrolase, maltose metaboli 93.67
2rdy_A803 BH0842 protein; PSI-II, structural genomics, prote 90.76
>1v7w_A Chitobiose phosphorylase; beta-sandwich, (alpha/alpha)6 barrel, transferase; HET: NDG NAG; 1.60A {Vibrio proteolyticus} SCOP: a.102.1.4 b.30.5.3 PDB: 1v7v_A* 1v7x_A* Back     alignment and structure
Probab=99.95  E-value=1.8e-27  Score=269.55  Aligned_cols=288  Identities=14%  Similarity=0.095  Sum_probs=196.9

Q ss_pred             Cccc-chhHHHHHHHHhcCChHHHHHHHHHHHhhhhhhhhcccCCCCCC-CCCCceeeccccCCCccccc------cccC
Q 007986          229 QVFI-RDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQG-LMPASFKVRNVPLESNKFEE------VLDP  300 (582)
Q Consensus       229 ~vfG-RD~~IS~lglL~~G~pEiar~~L~~la~lQs~~~tld~~~~~~G-liP~sfKI~h~~~r~~~ge~------~l~p  300 (582)
                      ..|| ||+++++++++ .++|+++|++|+.++..|..          +| .+|.-+.-.+++   +.|+.      .+.+
T Consensus       344 ~~~G~RD~~~~~~~l~-~~~p~~ar~~l~~~~~~Q~~----------~G~~~p~~~p~~~~~---~~g~~~~~~~~~~~g  409 (807)
T 1v7w_A          344 TGLGYRDTAQDAISVP-HANPEMTRKRIVDLLRGQVK----------AGYGLHLFDPDWFDP---EKEDVAPSKSPTVVP  409 (807)
T ss_dssp             CSEEHHHHHHHTTSCT-TTCHHHHHHHHHHHHHTBCT----------TSCBCSEECGGGGCC------------------
T ss_pred             CccCchHHhHHHHHHh-hcCHHHHHHHHHHHHhcccc----------CCCcceeeeeccccc---cccccCCcccccccc
Confidence            5799 99999999976 88999999999999876643          34 344422101110   00110      0001


Q ss_pred             CCCCCc--cC-ccCCCCcHHHHHHHHHHHHHHhCChhHHhh--hh-----------HHHHHHHHHHHhhcCCCCCCCcee
Q 007986          301 DFGESA--IG-RVAPVDSGLWWIILLRAYGKITGDYALQER--VD-----------VQTGIKLIMNLCLADGFDMFPSLL  364 (582)
Q Consensus       301 d~Ge~~--i~-~ygsVDAtLWfIIaL~~Y~k~TGD~~fl~~--p~-----------vq~~L~~IL~~~l~~gfd~~p~Ll  364 (582)
                      +.|+..  ++ .....|++|||++++++|+++|||.+|+++  |.           +++++++++..+..+   ..+   
T Consensus       410 ~~~~~~~~~g~~~~~~D~~lw~~~~~~~y~~~tGD~~~L~e~~p~~~~~~~~v~e~~~~~~~~~~~~~~~~---GL~---  483 (807)
T 1v7w_A          410 TPSDEDKIHGIKDTCSDDHLWLIPTICKYVMETGETSFFDQMIPYADGGEASVYEHMKAALDFSAEYVGQT---GIC---  483 (807)
T ss_dssp             -------CCCGGGCBSSGGGGHHHHHHHHHHHHCCGGGGGCEEECTTSCEEEHHHHHHHHHHHHHHSBCTT---SCB---
T ss_pred             CCCcchhhcCCCCCccchhhHHHHHHHHHHHHhCCHHHHhcccccccCCcchHHHHHHHHHHHHHhcCCCC---CCc---
Confidence            111111  11 123349999999999999999999999998  64           777777766543222   111   


Q ss_pred             ccCCCcccccccc-CCCcceehhHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHhhhcchhhhhhhhhc
Q 007986          365 VTDGSCMIDRRMG-IHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRY  443 (582)
Q Consensus       365 v~Dg~~WmD~r~g-r~G~pVEIQALwYnALr~aaeLa~~~g~~~~~~~a~~~~~ra~aLk~~f~~~FWld~~~l~~iyr~  443 (582)
                      .....+|.|. +. ..|+++|+|||||.||+.+++|++.+|+   .+.+++++++++.|++.|+++||.++.+.+   . 
T Consensus       484 ~~~~~DW~D~-~~~~~g~~v~~~a~~y~al~~~a~la~~lG~---~~~a~~~~~~A~~lk~~~~~~~w~~~~~~f---~-  555 (807)
T 1v7w_A          484 KGLRADWNDC-LNLGGGESSMVSFLHFWALQEFIDLAKFLGK---DQDVNTYTEMAANVREACETHLWDDEGGWY---I-  555 (807)
T ss_dssp             EEETCSSSTT-CCCEEEEEHHHHHHHHHHHHHHHHHHHHHTC---HHHHHHHHHHHHHHHHHHHHHSEETTTTEE---C-
T ss_pred             ccCCCCCCCc-CCCCCCeehhHHHHHHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHHHHHHHHhccCCCCCee---e-
Confidence            2233578664 32 2789999999999999999999999987   677889999999999999999998643211   0 


Q ss_pred             cccccccccccccCCCCCCccccccccccCCCceeecccCCCccccccccccchhhhhcCCCCHHHHHHHHHHHHhhhhh
Q 007986          444 KTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDD  523 (582)
Q Consensus       444 ~te~y~~~a~n~fni~p~~ip~~l~d~l~~~gGYL~~~v~P~~~D~R~~alGNlLAI~~gLl~~eqa~~Ild~i~~~w~e  523 (582)
                                               ..+..++-.+ +..  ...+.++++.+|.+|+++++++++|++++++.|.+   .
T Consensus       556 -------------------------~~~~~d~~~~-g~~--~~~~~~~~~~~~~~al~~g~~~~e~a~~~l~~v~~---~  604 (807)
T 1v7w_A          556 -------------------------RGLTKNGDKI-GTA--QQQEGRVHLESNTLAVLSGLASQERGEQAMDAVDE---H  604 (807)
T ss_dssp             -------------------------CEECTTSCEE-SCT--TCSSCCEEHHHHHHHHHTTCSCHHHHHHHHHHHHH---H
T ss_pred             -------------------------eeeccCCCCc-CCc--cCCCCcCcccchHHHHhhCCCCHHHHHHHHHHHHH---h
Confidence                                     0000011000 110  11234577888999999999999999999999998   8


Q ss_pred             hccCCCceecCCCCCCCCceeeeCCCCCCCCCCCccCCCCccchHHHHHHHHHH
Q 007986          524 LVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQVSSDIVTY  577 (582)
Q Consensus       524 Lltp~gLR~l~P~l~d~~Wr~~~~gd~~nrp~SYHNGgvWPwLLg~y~~A~lk~  577 (582)
                      |.+++|+|+++|+...  +....++-..+.|..||||++||+....++.|+.|+
T Consensus       605 L~~~~G~~~~~p~~~~--~~~~~g~~~~y~~~~~enG~~~~~~~~w~~~al~~~  656 (807)
T 1v7w_A          605 LFSPYGLHLNAPSFST--PNDDIGFVTRVYQGVKENGAIFSHPNPWAWVAETKL  656 (807)
T ss_dssp             HEETTEECSEESCCCS--CCTTTCGGGGSCTTBTTBTSEESTTHHHHHHHHHHT
T ss_pred             cCCCCceeecCCcccc--cCcCCceeeccCCccccccccccchHHHHHHHHHHc
Confidence            9999999999996531  111112224567788999999999988888888775
>3qde_A Cellobiose phosphorylase; cellulase, phosphate, transferase; 2.40A {Clostridium thermocellum} Back     alignment and structure
>3rrs_A Cellobiose phosphorylase; GH94, alpha barrel, disaccharide phosphorylase, transferase; 1.70A {Cellulomonas uda} PDB: 3rsy_A* 3s4a_A* 3s4b_A* 3s4c_A* 3s4d_A* 2cqs_A* 2cqt_A* 3qfy_A* 3qfz_A* 3qg0_A* 3act_A* 3acs_A* 3afj_A* Back     alignment and structure
>2z07_A Putative uncharacterized protein TTHA0978; uncharacterized conserved protein, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} Back     alignment and structure
>2jg0_A Periplasmic trehalase; family 37, hydrolase, inhibitor, glycoside hydrolase, glycosidase, 1-thiatrehazolin; HET: TTZ; 1.50A {Escherichia coli} SCOP: a.102.1.9 PDB: 2jf4_A* 2jjb_A* 2wyn_A* Back     alignment and structure
>2okx_A Rhamnosidase B; alpha barrel, glycoside hydrolase family 78, I hydrolase; 1.90A {Bacillus SP} Back     alignment and structure
>3cih_A Putative alpha-rhamnosidase; structural genomics, protein structure initiative II, NYSGXRC, (alpha/alpha)6 barrel domain; 2.33A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>1ulv_A Glucodextranase; GH family 15, (alpha-alpha)6-barrel, SLH domain, hydrolase; HET: ACR; 2.42A {Arthrobacter globiformis} SCOP: a.102.1.5 b.1.18.2 b.1.9.3 b.30.5.5 PDB: 1ug9_A* Back     alignment and structure
>1lf6_A Glucoamylase; (alpha/alpha) barrel, 6 alpha-helical hairpin torroid, super beta sandwich, carbohydrase family GH15; 2.10A {Thermoanaerobacteriumthermosaccharolyticum} SCOP: a.102.1.5 b.30.5.5 PDB: 1lf9_A* Back     alignment and structure
>2p0v_A Hypothetical protein BT3781; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.102.1.8 Back     alignment and structure
>3qry_B Putative uncharacterized protein; alpha-alpha six fold, glycoside hydrolase, mannosidase, 1- deoxymannojirimycin, hydrolase; HET: DMJ; 1.75A {Streptococcus pneumoniae} SCOP: a.102.1.0 PDB: 3qpf_A* 3qsp_A* Back     alignment and structure
>3qt9_A Putative uncharacterized protein CPE0426; alpha-alpha six fold, glycoside hydrolase, mannosidase, HYDR; HET: YDR; 2.05A {Clostridium perfringens} SCOP: a.102.1.8 PDB: 3qt3_A* 2nvp_A Back     alignment and structure
>2fba_A Glucoamylase Glu1; (alpha-alpha)6 barrel, TRIS, hydrolase; 1.10A {Saccharomycopsis fibuligera} SCOP: a.102.1.1 PDB: 1ayx_A* 2f6d_A Back     alignment and structure
>3p2c_A Putative glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE PGE; 1.60A {Bacteroides ovatus} SCOP: a.102.1.8 PDB: 3on6_A* Back     alignment and structure
>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A* Back     alignment and structure
>1gai_A Glucoamylase-471; hydrolase, glycosidase, polysaccharide degradation, glycoPro; HET: MAN NAG BMA GAC; 1.70A {Aspergillus awamori} SCOP: a.102.1.1 PDB: 1gah_A* 3gly_A* 1dog_A* 1glm_A* 1agm_A* 3eqa_A* Back     alignment and structure
>1h54_A Maltose phosphorylase; hydrolase, maltose metabolism; 2.15A {Lactobacillus brevis} SCOP: a.102.1.4 b.30.5.3 Back     alignment and structure
>2rdy_A BH0842 protein; PSI-II, structural genomics, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.03A {Bacillus halodurans c-125} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 582
d1v7wa1 531 a.102.1.4 (A:271-801) Chitobiose phosphorylase Chb 2e-13
>d1v7wa1 a.102.1.4 (A:271-801) Chitobiose phosphorylase ChbP {Vibrio proteolyticus [TaxId: 671]} Length = 531 Back     information, alignment and structure

class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Glycosyltransferase family 36 C-terminal domain
domain: Chitobiose phosphorylase ChbP
species: Vibrio proteolyticus [TaxId: 671]

 Score = 70.7 bits (172), Expect = 2e-13
 Identities = 43/361 (11%), Positives = 92/361 (25%), Gaps = 51/361 (14%)

Query: 211 IGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDC 270
              V +      +      +  RD    A++       E+ R  ++  L+ Q        
Sbjct: 57  TCVVWSRFASFIEVGGRTGLGYRDTAQDAISVPH-ANPEMTRKRIVDLLRGQVKAGYGLH 115

Query: 271 YSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKIT 330
                   P      +V    +        D  +    +    D  LW I  +  Y   T
Sbjct: 116 LFDPDWFDPEK---EDVAPSKSPTVVPTPSDEDKIHGIKDTCSDDHLWLIPTICKYVMET 172

Query: 331 GDYA-LQERVDVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMI------DRRMGIHGHPL 383
           G+ +   + +    G +  +   +    D     +   G C        D      G   
Sbjct: 173 GETSFFDQMIPYADGGEASVYEHMKAALDFSAEYVGQTGICKGLRADWNDCLNLGGGESS 232

Query: 384 EIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRY 443
            +  L + AL+                               I    ++   +    Y  
Sbjct: 233 MVSFLHFWALQ-----------------------------EFIDLAKFLGKDQDVNTYTE 263

Query: 444 KTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSS 503
                                 W +  + + G  +         + R     N  +++S 
Sbjct: 264 MAANVREACETHLWDDEGG---WYIRGLTKNGDKI---GTAQQQEGRVHLESNTLAVLSG 317

Query: 504 LGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSW 563
           L + ++ E  +   +A  + L     L +  P+  + +  I   +  +       NG  +
Sbjct: 318 LASQERGEQAM---DAVDEHLFSPYGLHLNAPSFSTPNDDIGFVT--RVYQGVKENGAIF 372

Query: 564 P 564
            
Sbjct: 373 S 373

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query582
d1v7wa1 531 Chitobiose phosphorylase ChbP {Vibrio proteolyticu 99.88
d1lf6a1397 Bacterial glucoamylase, C-terminal domain {Thermoa 99.77
d2jg0a1511 Periplasmic trehalase TreA {Escherichia coli [TaxI 99.61
d1ulva1413 Glucodextranase, domain A {Arthrobacter globiformi 99.43
d2p0va1443 Hypothetical protein BT3781 {Bacteroides thetaiota 97.72
d2fbaa1492 Glucoamylase {Yeast (Saccharomycopsis fibuligera) 97.67
d2nvpa1426 Hypothetical protein CPF0428 {Clostridium perfring 97.3
d1gaia_472 Glucoamylase {Aspergillus awamori, variant x100 [T 97.02
d1h54a1485 Lactobacillus maltose phosphorylase, central domai 94.44
>d1v7wa1 a.102.1.4 (A:271-801) Chitobiose phosphorylase ChbP {Vibrio proteolyticus [TaxId: 671]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Glycosyltransferase family 36 C-terminal domain
domain: Chitobiose phosphorylase ChbP
species: Vibrio proteolyticus [TaxId: 671]

Probab=99.88  E-value=1.7e-23  Score=218.43  Aligned_cols=305  Identities=14%  Similarity=0.052  Sum_probs=200.7

Q ss_pred             CCCCcccchhHHHHHHHHhcCChHHHHHHHHHHHhhhhhhhhcccCCCCCCCCCCceeeccccCCCccccccccCCC-CC
Q 007986          226 NYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDF-GE  304 (582)
Q Consensus       226 nY~~vfGRD~~IS~lglL~~G~pEiar~~L~~la~lQs~~~tld~~~~~~GliP~sfKI~h~~~r~~~ge~~l~pd~-Ge  304 (582)
                      .|...|.||+.+.+++++. ++||+||++|+.+.+.|.......+.....|.++......    ....+.....+.. +.
T Consensus        72 ~~~~~~~rD~~~~~~~~~~-~~pe~Ar~~L~~~~~~q~~~g~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~  146 (531)
T d1v7wa1          72 GRTGLGYRDTAQDAISVPH-ANPEMTRKRIVDLLRGQVKAGYGLHLFDPDWFDPEKEDVA----PSKSPTVVPTPSDEDK  146 (531)
T ss_dssp             SCCSEEHHHHHHHTTSCTT-TCHHHHHHHHHHHHHTBCTTSCBCSEECGGGGCC--------------------------
T ss_pred             CCCcEEEcHHHHHHHHHHh-cCHHHHHHHHHHHHhhhhhcccchhhcCCCcCcCCccccc----ccccCcCCCCCccccc
Confidence            4566667999999999764 5899999999999987766543222111223333211000    0000000000000 00


Q ss_pred             CccCccCCCCcHHHHHHHHHHHHHHhCChhHHhh--hhHHHHHHHH-------HHHhhcCCCCCCCceeccCCCcccccc
Q 007986          305 SAIGRVAPVDSGLWWIILLRAYGKITGDYALQER--VDVQTGIKLI-------MNLCLADGFDMFPSLLVTDGSCMIDRR  375 (582)
Q Consensus       305 ~~i~~ygsVDAtLWfIIaL~~Y~k~TGD~~fl~~--p~vq~~L~~I-------L~~~l~~gfd~~p~Llv~Dg~~WmD~r  375 (582)
                      .........|.++|+++++++|+++|||.+|+++  |.+.....++       .++....  .....+.+....+|.|.-
T Consensus       147 ~~~~~~~~~d~~~~i~~a~~~Y~~~TgD~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~gl~~~g~~dw~d~~  224 (531)
T d1v7wa1         147 IHGIKDTCSDDHLWLIPTICKYVMETGETSFFDQMIPYADGGEASVYEHMKAALDFSAEY--VGQTGICKGLRADWNDCL  224 (531)
T ss_dssp             CCCGGGCBSSGGGGHHHHHHHHHHHHCCGGGGGCEEECTTSCEEEHHHHHHHHHHHHHHS--BCTTSCBEEETCSSSTTC
T ss_pred             cccccccccccHHHHHHHHHHHHHhhCCHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhhe--eCCCCCcccCCCcccccc
Confidence            0111345679999999999999999999999987  4443322222       2222211  111112233445788764


Q ss_pred             ccCCCcceehhHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHhhhcchhhhhhhhhccccccccccccc
Q 007986          376 MGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNK  455 (582)
Q Consensus       376 ~gr~G~pVEIQALwYnALr~aaeLa~~~g~~~~~~~a~~~~~ra~aLk~~f~~~FWld~~~l~~iyr~~te~y~~~a~n~  455 (582)
                      .+..|..+++|+++|.||+.+++|++.+|+   .+.+.++++.++.|+..|+++||.+..+.+                 
T Consensus       225 ~~~~~~~~~~~~~~~~al~~~~~la~~~g~---~~~a~~~~~~a~~l~~~~~~~~~~~~~~~~-----------------  284 (531)
T d1v7wa1         225 NLGGGESSMVSFLHFWALQEFIDLAKFLGK---DQDVNTYTEMAANVREACETHLWDDEGGWY-----------------  284 (531)
T ss_dssp             CCEEEEEHHHHHHHHHHHHHHHHHHHHHTC---HHHHHHHHHHHHHHHHHHHHHSEETTTTEE-----------------
T ss_pred             cCCCCccHHHHHHHHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHHHHHHHHhcCCccccce-----------------
Confidence            456688999999999999999999999987   778888999999999999999998654321                 


Q ss_pred             cCCCCCCccccccccccCCCceeecccCCCccccccccccchhhhhcCCCCHHHHHHHHHHHHhhhhhhccCCCceecCC
Q 007986          456 FNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDDLVGHMPLKICYP  535 (582)
Q Consensus       456 fni~p~~ip~~l~d~l~~~gGYL~~~v~P~~~D~R~~alGNlLAI~~gLl~~eqa~~Ild~i~~~w~eLltp~gLR~l~P  535 (582)
                                  .+++..+ +...+...+  .+.+++..+|.+++++++++++|++++++.+.+   +|.++.+++.+.|
T Consensus       285 ------------~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~---~l~~~~~~~~~~~  346 (531)
T d1v7wa1         285 ------------IRGLTKN-GDKIGTAQQ--QEGRVHLESNTLAVLSGLASQERGEQAMDAVDE---HLFSPYGLHLNAP  346 (531)
T ss_dssp             ------------CCEECTT-SCEESCTTC--SSCCEEHHHHHHHHHTTCSCHHHHHHHHHHHHH---HHEETTEECSEES
T ss_pred             ------------eEEEcCC-CCcccccCc--cccccchhhcchhhhcCCCCHHHHHHHHHHHHH---hhcCchhhhcccc
Confidence                        1111111 122222222  344578888999999999999999999999988   9999999999999


Q ss_pred             CCCCCCceeeeCCCCCCCCCCCccCCCCccchHHHHHHHHHH
Q 007986          536 ALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQVSSDIVTY  577 (582)
Q Consensus       536 ~l~d~~Wr~~~~gd~~nrp~SYHNGgvWPwLLg~y~~A~lk~  577 (582)
                      +.  ..+....+.-..+.|..||||++||+....++.|+.|+
T Consensus       347 ~~--~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~al~~~  386 (531)
T d1v7wa1         347 SF--STPNDDIGFVTRVYQGVKENGAIFSHPNPWAWVAETKL  386 (531)
T ss_dssp             CC--CSCCTTTCGGGGSCTTBTTBTSEESTTHHHHHHHHHHT
T ss_pred             cc--ccchhhcccccccCCccccCCCcCcHHHHHHHHHHHHc
Confidence            43  33333333334567889999999999999888887664
>d1lf6a1 a.102.1.5 (A:288-684) Bacterial glucoamylase, C-terminal domain {Thermoanaerobacterium thermosaccharolyticum [TaxId: 1517]} Back     information, alignment and structure
>d2jg0a1 a.102.1.9 (A:37-547) Periplasmic trehalase TreA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ulva1 a.102.1.5 (A:274-686) Glucodextranase, domain A {Arthrobacter globiformis [TaxId: 1665]} Back     information, alignment and structure
>d2p0va1 a.102.1.8 (A:39-481) Hypothetical protein BT3781 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
>d2fbaa1 a.102.1.1 (A:1-492) Glucoamylase {Yeast (Saccharomycopsis fibuligera) [TaxId: 4944]} Back     information, alignment and structure
>d2nvpa1 a.102.1.8 (A:2-427) Hypothetical protein CPF0428 {Clostridium perfringens [TaxId: 1502]} Back     information, alignment and structure
>d1gaia_ a.102.1.1 (A:) Glucoamylase {Aspergillus awamori, variant x100 [TaxId: 105351]} Back     information, alignment and structure
>d1h54a1 a.102.1.4 (A:269-753) Lactobacillus maltose phosphorylase, central domain {Lactobacillus brevis [TaxId: 1580]} Back     information, alignment and structure