Citrus Sinensis ID: 008029
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 580 | 2.2.26 [Sep-21-2011] | |||||||
| Q6TPH1 | 458 | Purple acid phosphatase 2 | yes | no | 0.762 | 0.965 | 0.761 | 0.0 | |
| Q9SFU3 | 532 | Purple acid phosphatase 1 | no | no | 0.872 | 0.951 | 0.601 | 0.0 | |
| O48840 | 545 | Purple acid phosphatase 1 | no | no | 0.874 | 0.930 | 0.483 | 1e-140 | |
| Q8S340 | 434 | Purple acid phosphatase 2 | no | no | 0.615 | 0.822 | 0.394 | 1e-83 | |
| Q9LXI7 | 427 | Probable purple acid phos | no | no | 0.620 | 0.843 | 0.394 | 3e-82 | |
| Q9LJU7 | 437 | Purple acid phosphatase 1 | no | no | 0.643 | 0.853 | 0.408 | 3e-82 | |
| Q9LXI4 | 437 | Purple acid phosphatase 2 | no | no | 0.615 | 0.816 | 0.392 | 6e-81 | |
| Q9SDZ9 | 465 | Purple acid phosphatase 2 | N/A | no | 0.662 | 0.825 | 0.345 | 3e-64 | |
| Q9SIV9 | 468 | Purple acid phosphatase 1 | no | no | 0.698 | 0.865 | 0.337 | 5e-63 | |
| Q9C510 | 466 | Purple acid phosphatase 6 | no | no | 0.720 | 0.896 | 0.345 | 1e-62 |
| >sp|Q6TPH1|PPA23_ARATH Purple acid phosphatase 23 OS=Arabidopsis thaliana GN=PAP23 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 739 bits (1907), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/445 (76%), Positives = 389/445 (87%), Gaps = 3/445 (0%)
Query: 15 LITTTTTTKVVLVVAGGTLQRIPTTLQGPFEPVTRRFDPSLRRGSDDLPMNHTRLKK-NV 73
L+ T T + L++A + IPTTL GPF+P+TRRF+PSLRRGSDDLPM+H RL+K NV
Sbjct: 3 LLIMITLTSISLLLAAA--ETIPTTLDGPFKPLTRRFEPSLRRGSDDLPMDHPRLRKRNV 60
Query: 74 TSNFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGG 133
+S+FPEQIALA+S+PTSMWVSWV+GDA +G +V PLDPS++AS+VWYGK+ G Y K+ G
Sbjct: 61 SSDFPEQIALALSTPTSMWVSWVTGDAIVGKDVKPLDPSSIASEVWYGKEKGNYMLKKKG 120
Query: 134 NATVYSQLYPFKGLLNYTSGIIHHVKIDGLDPGTKYYYKCGDSKIPAMSAEHVFETLPLP 193
NATVYSQLYP GLLNYTSGIIHHV IDGL+P T+YYY+CGDS +PAMS E FETLPLP
Sbjct: 121 NATVYSQLYPSDGLLNYTSGIIHHVLIDGLEPETRYYYRCGDSSVPAMSEEISFETLPLP 180
Query: 194 SPTSYPHRIAVIGDLGLTSNSSTTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYS 253
S +YPHRIA +GDLGLTSN++TT+DHL++NDPSL+++VGDLTYANQY T GGK C+S
Sbjct: 181 SKDAYPHRIAFVGDLGLTSNTTTTIDHLMENDPSLVIIVGDLTYANQYRTIGGKGVPCFS 240
Query: 254 CAFPDAPIRETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVP 313
C+FPDAPIRETYQPRWD WGRFMEPLTS+VP MVIEGNHEIEPQ +GITFKSY RFAVP
Sbjct: 241 CSFPDAPIRETYQPRWDAWGRFMEPLTSKVPTMVIEGNHEIEPQASGITFKSYSERFAVP 300
Query: 314 SEESGSNSNFYYSFNAGGVHFIMLGAYVDYNSTGAQYAWLKEDLHKLDRTVTPWLAAAWH 373
+ ESGSNSN YYSF+AGGVHF+MLGAYVDYN+TG QYAWLKEDL K+DR VTPWL A H
Sbjct: 301 ASESGSNSNLYYSFDAGGVHFVMLGAYVDYNNTGLQYAWLKEDLSKVDRAVTPWLVATMH 360
Query: 374 PPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDACGPVYI 433
PPWYNSYSSHYQEFECMRQEME LLYQY VDIVF+GHVHAYERMNR+YNYTLD CGPVYI
Sbjct: 361 PPWYNSYSSHYQEFECMRQEMEELLYQYRVDIVFAGHVHAYERMNRIYNYTLDPCGPVYI 420
Query: 434 TVGDGGNIEQVDVDHADDPGKCPSA 458
T+GDGGNIE+VDVD ADDPGKC S+
Sbjct: 421 TIGDGGNIEKVDVDFADDPGKCHSS 445
|
Acid phosphatase activity with ATP, ADP, dATP, pyrophosphate, polyphosphate, phosphoserine and phosphothreonine. Low or no activity with phosphotyrosine, AMP and phytate. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 2 |
| >sp|Q9SFU3|PPA15_ARATH Purple acid phosphatase 15 OS=Arabidopsis thaliana GN=PAP15 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 640 bits (1650), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/514 (60%), Positives = 382/514 (74%), Gaps = 8/514 (1%)
Query: 29 AGGTLQRIPTTLQGPFEPVTRRFDPSLRRGSDDLPMNHTRLKKNVTSNFPEQIALAISSP 88
A + IP+TL GPF PVT D SLR + DLP R+++ V PEQI+L++SS
Sbjct: 15 AISSAHSIPSTLDGPFVPVTVPLDTSLRGQAIDLPDTDPRVRRRVIGFEPEQISLSLSSD 74
Query: 89 TS-MWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGL 147
+WVSW++G+ QIG V PLDP+++ S V +G + + G++ VYSQLYPF GL
Sbjct: 75 HDSIWVSWITGEFQIGKKVKPLDPTSINSVVQFGTLRHSLSHEAKGHSLVYSQLYPFDGL 134
Query: 148 LNYTSGIIHHVKIDGLDPGTKYYYKCGDSKIPAMSAEHVFETLPLPSPTSYPHRIAVIGD 207
LNYTSGIIHHV+I GL P T YYY+CGD AMS H F T+P+ SP+SYP RIAV+GD
Sbjct: 135 LNYTSGIIHHVRITGLKPSTIYYYRCGDPSRRAMSKIHHFRTMPVSSPSSYPGRIAVVGD 194
Query: 208 LGLTSNSSTTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQP 267
LGLT N++ T+ HLI N P LIL++GD++YAN YLT G ++ CYSC+FP+ PI ETYQP
Sbjct: 195 LGLTYNTTDTISHLIHNSPDLILLIGDVSYANLYLTNG-TSSDCYSCSFPETPIHETYQP 253
Query: 268 RWDGWGRFMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSNFYYSF 327
RWD WGRFME LTS+VP+MVIEGNHEIE Q TF++Y +RFA P ESGS+S YYSF
Sbjct: 254 RWDYWGRFMENLTSKVPLMVIEGNHEIELQAENKTFEAYSSRFAFPFNESGSSSTLYYSF 313
Query: 328 NAGGVHFIMLGAYVDYNSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEF 387
NAGG+HF+MLGAY+ Y+ + QY WLK+DL K+DR+VTPWL A+WHPPWY+SY++HY+E
Sbjct: 314 NAGGIHFVMLGAYIAYDKSAEQYEWLKKDLAKVDRSVTPWLVASWHPPWYSSYTAHYREA 373
Query: 388 ECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDACGPVYITVGDGGNIEQVDVD 447
ECM++ ME LLY YG DIVF+GHVHAYER NRVYNY LD CGPVYI +GDGGN E++ ++
Sbjct: 374 ECMKEAMEELLYSYGTDIVFNGHVHAYERSNRVYNYELDPCGPVYIVIGDGGNREKMAIE 433
Query: 448 HADDPGKCPSAGENL-PEFGGVCHLNFTSGPAKGKFCWSKQPEWSAYRESSFGHGILEVV 506
HADDPGKCP P GG C NFT KFCW +QP++SA RESSFGHGILE+
Sbjct: 434 HADDPGKCPEPLTTPDPVMGGFCAWNFT---PSDKFCWDRQPDYSALRESSFGHGILEMK 490
Query: 507 NSTYALWTWHRNQDNYKEDSRGDHIYIVRQPELC 540
N T+ALWTW+RNQD+ E GD IYIVRQP+ C
Sbjct: 491 NETWALWTWYRNQDSSSE--VGDQIYIVRQPDRC 522
|
Acid phosphatase activity with p-nitrophenyl phosphate (pNPP), D-myoinositol 1-phosphate (Ins(1)P1), phytic acid and Myo-inositol hexakisphosphate. Low or no activity with Glc-6-P and ATP. Confers shoot growth stimulation, enhanced salt and osmotic stress tolerance, and ABA insensitivity. May modulate ascorbic acid (AsA) levels by controlling the input of myoinositol into this branch of AsA biosynthesis. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|O48840|PPA13_ARATH Purple acid phosphatase 13 OS=Arabidopsis thaliana GN=PAP13 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 498 bits (1283), Expect = e-140, Method: Compositional matrix adjust.
Identities = 269/556 (48%), Positives = 349/556 (62%), Gaps = 49/556 (8%)
Query: 11 LAIFLITTTTTTKVVLVVAGGTLQRIPTTLQGPFEPVTRRFDPSLRRGSDDLPMNHTRLK 70
++ F+I +T T +V P+TL GP PVT DP+L + DLP +
Sbjct: 9 MSFFVIFASTVTIIV--------HGFPSTLDGPLNPVTAPLDPNLNPIAFDLPESDPSFV 60
Query: 71 KNVTSNF-PEQIALAIS-SPTSMWVSWVSGDAQIGS-NVTPLDPSTVASDVWYGKQSGKY 127
K ++ PEQI++++S S S+W+SWV+G+ QIG + PLDP+ V S V Y + +
Sbjct: 61 KPISEFLLPEQISVSLSYSFDSVWISWVTGEYQIGEKDSAPLDPNCVQSIVQYREFDVRR 120
Query: 128 TSKRG--GNATVYSQLYPFK-GLLNYTSGIIHHVKIDGLDPGTKYYYKCGDSKIPAMSAE 184
T K+ G++ VY+Q Y + G +NYTSGIIHHV++ GL P T Y Y+CGD + AMS E
Sbjct: 121 TRKQNATGHSIVYNQQYSSENGFMNYTSGIIHHVQLTGLKPNTLYRYQCGDPSLSAMSKE 180
Query: 185 HVFETLPLPSPTSYPHRIAVIGDLGLTSNSSTTVDHLIQNDPSLILMVGDLTYANQYLT- 243
+ F T+P + +YPHRI V GDLGLT N+ST + H++ N P L++++G +YA+ YL
Sbjct: 181 YYFRTMPKSTSENYPHRIVVAGDLGLTYNTSTVLGHILSNHPDLVVLLGGFSYADTYLAN 240
Query: 244 ---------------TGGKAASCYSCAFPDAPIRETYQPRWDGWGRFMEPLTSRVPMMVI 288
T SCYS ETYQPRWD WGRFMEPLT+ VP M++
Sbjct: 241 KTKLDCSSCHCDQNGTSSDCGSCYSSG-------ETYQPRWDYWGRFMEPLTANVPTMMV 293
Query: 289 EGNHEIEPQVAG-ITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYVDYNSTG 347
G HEIEPQ +TF +Y +RFA PS ESGS S YYSFNAGG HFI+L +Y Y+++
Sbjct: 294 AGEHEIEPQTENNLTFAAYSSRFAFPSNESGSFSPLYYSFNAGGAHFIVLNSYTLYDNSS 353
Query: 348 AQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVF 407
QY WL+ DL K++R+ TPW+ A W PWY+++ HY+E E MR +E LLY Y VDIVF
Sbjct: 354 DQYIWLESDLIKINRSETPWVVATWSLPWYSTFKGHYREAESMRIHLEDLLYNYRVDIVF 413
Query: 408 SGHVHAYERMNRVYNYTLDACGPVYITVGDGGNIEQVDVDHADDPGKCPSAGENLPEFGG 467
+ HV AYER NRVYNYTLD CGPVYIT G GG +++ H DDPG P +N
Sbjct: 414 NSHVDAYERSNRVYNYTLDQCGPVYITTGAGG-AGKLETQHVDDPGNIPDPSQNYS---- 468
Query: 468 VCH---LNFTSGPAKGKFCWSKQPEWSAYRESSFGHGILEVVNSTYALWTWHRNQDNYKE 524
C LN T P K + C KQPE+SAYRESSFG GILEV N T+ALW+W+RNQD Y
Sbjct: 469 -CRSSGLNSTLEPVKDETCPVKQPEYSAYRESSFGFGILEVKNETHALWSWNRNQDLYY- 526
Query: 525 DSRGDHIYIVRQPELC 540
D I+IVRQPE+C
Sbjct: 527 -LAADVIHIVRQPEMC 541
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q8S340|PPA22_ARATH Purple acid phosphatase 22 OS=Arabidopsis thaliana GN=PAP22 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 311 bits (796), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 176/446 (39%), Positives = 238/446 (53%), Gaps = 89/446 (19%)
Query: 78 PEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATV 137
P+Q+ ++++ M V++++ D ++ S V YGKQ GKY K G T
Sbjct: 47 PQQVHISLAGKDHMRVTFITEDNKVESVVE------------YGKQPGKYDGKATGECTS 94
Query: 138 YSQLYPFKGLLNYTSGIIHHVKIDGLDPGTKYYYKCGDSKIPAMSAEHVFETLPLPSPTS 197
Y + Y SG IHHVKI L T YYY+CG + E F+T P++
Sbjct: 95 YKYFF-------YKSGKIHHVKIGPLQANTTYYYRCGGN-----GPEFSFKT----PPST 138
Query: 198 YPHRIAVIGDLGLTSNSSTTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFP 257
+P A++GDLG T ++ T+ H+ D + L+ GDL+YA
Sbjct: 139 FPVEFAIVGDLGQTEWTAATLSHINSQDYDVFLLPGDLSYA------------------- 179
Query: 258 DAPIRETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIE--PQVAGITFKSYLTRFAVPSE 315
+T+QP WD +GR +EPL S+ P MV EGNHEIE P + TFKSY R+ +P
Sbjct: 180 -----DTHQPLWDSFGRLVEPLASKRPWMVTEGNHEIEFFPIIEHTTFKSYNARWLMPHT 234
Query: 316 ESGSNSNFYYSFNAGGVHFIMLGAYVDYNSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPP 375
ES S SN YYSF+ GVH +MLG+Y D++ QY WL+ DL K+DR TPW+ H P
Sbjct: 235 ESFSTSNLYYSFDVAGVHTVMLGSYTDFDCESDQYQWLQADLAKVDRKTTPWVVVLLHAP 294
Query: 376 WYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDACGPVYITV 435
WYN+ +H E E MR+ ME+LL+ VD+VFSGHVHAYER RVYN D CGP++IT+
Sbjct: 295 WYNTNEAHEGEGESMREAMESLLFNARVDVVFSGHVHAYERFKRVYNNKADPCGPIHITI 354
Query: 436 GDGGNIEQVDVDHADDPGKCPSAGENLPEFGGVCHLNFTSGPAKGKFCWSKQPEWSAYRE 495
GDGGN E + L+F P+ S +RE
Sbjct: 355 GDGGNREGLA-------------------------LSFKKPPSP----------LSEFRE 379
Query: 496 SSFGHGILEVVNSTYALWTWHRNQDN 521
SSFGHG L+V++ A W+WHRN D+
Sbjct: 380 SSFGHGRLKVMDGKRAHWSWHRNNDS 405
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9LXI7|PPA20_ARATH Probable purple acid phosphatase 20 OS=Arabidopsis thaliana GN=PAP20 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 306 bits (784), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 177/449 (39%), Positives = 238/449 (53%), Gaps = 89/449 (19%)
Query: 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNAT 136
FP+Q+ +++ P M +SW++ S+++ V YG SGKY G ++
Sbjct: 43 FPDQVHISLVGPDKMRISWIT-------------QSSISPSVVYGTVSGKYEGSANGTSS 89
Query: 137 VYSQLYPFKGLLNYTSGIIHHVKIDGLDPGTKYYYKCGDSKIPAMSAEHVFETLPLPSPT 196
Y L L Y SG I+ V I L P T YYYKCG P+ + E F T P+
Sbjct: 90 SYHYL------LIYRSGQINDVVIGPLKPNTVYYYKCGG---PSSTQEFSFRT----PPS 136
Query: 197 SYPHRIAVIGDLGLTSNSSTTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAF 256
+P + AV GDLG + S +T++H+ + D + ++ GDL+YAN Y
Sbjct: 137 KFPIKFAVSGDLGTSEWSKSTLEHVSKWDYDVFILPGDLSYANMY--------------- 181
Query: 257 PDAPIRETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIE--PQVAGITFKSYLTRFAVPS 314
QP WD +GR ++PL S+ P MV GNHE+E P + F +Y R+ +P
Sbjct: 182 ---------QPLWDTFGRLVQPLASQRPWMVTHGNHELEKIPILHSNPFTAYNKRWRMPF 232
Query: 315 EESGSNSNFYYSFNAGGVHFIMLGAYVDYNSTGAQYAWLKEDLHKLDRTVTPWLAAAWHP 374
EESGS+SN YYSFN GVH IMLG+Y D+ QY WL+ +L K+DR TPW+ A H
Sbjct: 233 EESGSSSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHA 292
Query: 375 PWYNSYSSHYQEFEC--MRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDACGPVY 432
PWYNS +H E E M++ ME LLY+ VD+VF+GHVHAYER +RVY D CGPVY
Sbjct: 293 PWYNSNEAHQGEKESVEMKESMETLLYKARVDLVFAGHVHAYERFSRVYQDKFDKCGPVY 352
Query: 433 ITVGDGGNIEQVDVDHADDPGKCPSAGENLPEFGGVCHLNFTSGPAKGKFCWSKQPEWSA 492
I +GDGGN+E + + D PE S
Sbjct: 353 INIGDGGNLEGLATKYRD-----------------------------------PNPEISL 377
Query: 493 YRESSFGHGILEVVNSTYALWTWHRNQDN 521
+RE+SFGHG L V N+T+A W WHRN D+
Sbjct: 378 FREASFGHGQLVVENATHARWEWHRNDDD 406
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9LJU7|PPA18_ARATH Purple acid phosphatase 18 OS=Arabidopsis thaliana GN=PAP18 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 306 bits (784), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 190/465 (40%), Positives = 249/465 (53%), Gaps = 92/465 (19%)
Query: 71 KNVTSNFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSK 130
K +S+ PEQ+ ++++ M V+WV+ D PS V YG GKY+
Sbjct: 40 KQKSSSVPEQVHISLAGDKHMRVTWVTNDKS--------SPSFVE----YGTSPGKYSYL 87
Query: 131 RGGNATVYSQLYPFKGLLNYTSGIIHHVKIDGLDPGTKYYYKCGDSKIPAMSAEHVFETL 190
G +T YS + Y SG IHH I L+ T YYY+CG E +T
Sbjct: 88 GQGESTSYS-------YIMYRSGKIHHTVIGPLEADTVYYYRCG-----GEGPEFHLKT- 134
Query: 191 PLPSPTSYPHRIAVIGDLGLTSNSSTTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAAS 250
P +P AV GDLG T + +T+DH+ Q ++ L+ GDL+YA+ Y+
Sbjct: 135 ---PPAQFPITFAVAGDLGQTGWTKSTLDHIDQCKYAVHLLPGDLSYAD-YM-------- 182
Query: 251 CYSCAFPDAPIRETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIE--PQVAGITFKSYLT 308
Q +WD +G ++PL S P MV +GNHE E P + F S+ +
Sbjct: 183 ---------------QHKWDTFGELVQPLASVRPWMVTQGNHEKESIPFIVD-EFVSFNS 226
Query: 309 RFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYVDYNSTGAQYAWLKEDLHKLDRTVTPWL 368
R+ +P EESGSNSN YYSF GVH IMLG+Y DY+ QY+WLK DL K+DR TPWL
Sbjct: 227 RWKMPYEESGSNSNLYYSFEVAGVHAIMLGSYTDYDRYSDQYSWLKADLSKVDRERTPWL 286
Query: 369 AAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDAC 428
+H PWYNS ++H E + M EME LLY GVDIVF+GHVHAYER RV N D C
Sbjct: 287 IVLFHVPWYNSNNAHQHEGDEMMAEMEPLLYASGVDIVFTGHVHAYERTKRVNNGKSDPC 346
Query: 429 GPVYITVGDGGNIEQVDVDHADDPGKCPSAGENLPEFGGVCHLNFTSGPAKGKFCWSKQP 488
GPV+IT+GDGGN E + + D PS P
Sbjct: 347 GPVHITIGDGGNREGLARKYKD-----PS------------------------------P 371
Query: 489 EWSAYRESSFGHGILEVVNSTYALWTWHRNQDNYKEDSRGDHIYI 533
EWS +RE+SFGHG L++VNST+ALWTWHRN D+ E +R D +++
Sbjct: 372 EWSVFREASFGHGELQMVNSTHALWTWHRNDDD--EPTRSDEVWL 414
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9LXI4|PPA21_ARATH Purple acid phosphatase 21 OS=Arabidopsis thaliana GN=PAP21 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 302 bits (773), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 175/446 (39%), Positives = 232/446 (52%), Gaps = 89/446 (19%)
Query: 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNAT 136
+P+Q+ ++++ M V++ + D VAS V YGK KY K G +T
Sbjct: 50 YPQQVHISLAGKDHMRVTYTTDDLN------------VASMVEYGKHPKKYDKKTAGEST 97
Query: 137 VYSQLYPFKGLLNYTSGIIHHVKIDGLDPGTKYYYKCGDSKIPAMSAEHVFETLPLPSPT 196
Y+ + Y SG IHHVKI L P TKYYY+CG E F+T P+
Sbjct: 98 SYTYFF-------YNSGKIHHVKIGPLKPNTKYYYRCG-----GHGDEFSFKT----PPS 141
Query: 197 SYPHRIAVIGDLGLTSNSSTTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAF 256
+P AV GDLG T + T+D + + D + L+ GDL+YA
Sbjct: 142 KFPIEFAVAGDLGQTDWTVRTLDQIRKRDFDVFLLPGDLSYA------------------ 183
Query: 257 PDAPIRETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIE--PQVAGITFKSYLTRFAVPS 314
+T+QP WD +GR +E L S P MV EGNHEIE P I+FKSY R+ +P
Sbjct: 184 ------DTHQPLWDSFGRLLETLASTRPWMVTEGNHEIESFPTNDHISFKSYNARWLMPH 237
Query: 315 EESGSNSNFYYSFNAGGVHFIMLGAYVDYNSTGAQYAWLKEDLHKLDRTVTPWLAAAWHP 374
ES S+SN YYSF+ GVH +MLG+Y Y S QY WL+ DL K+DR TPWL H
Sbjct: 238 AESLSHSNLYYSFDVAGVHTVMLGSYTPYESHSDQYHWLQADLRKVDRKKTPWLVVVMHT 297
Query: 375 PWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDACGPVYIT 434
PWY++ +HY E E MR +E+LLY+ VD+VF+GHVH YER +YN D CGP+YIT
Sbjct: 298 PWYSTNKAHYGEGEKMRSALESLLYRAQVDVVFAGHVHTYERFKPIYNKKADPCGPMYIT 357
Query: 435 VGDGGNIEQVDVDHADDPGKCPSAGENLPEFGGVCHLNFTSGPAKGKFCWSKQPEWSAYR 494
+GDGGN E + + +F + P S +R
Sbjct: 358 IGDGGNREGLAL----------------------------------RFKKPQSP-LSEFR 382
Query: 495 ESSFGHGILEVVNSTYALWTWHRNQD 520
ESSFGHG L +++ A W+WHRN D
Sbjct: 383 ESSFGHGRLRIIDHKRAHWSWHRNND 408
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9SDZ9|PPAF2_IPOBA Purple acid phosphatase 2 OS=Ipomoea batatas GN=PAP2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 246 bits (629), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 166/480 (34%), Positives = 229/480 (47%), Gaps = 96/480 (20%)
Query: 61 DLPMNHTRLKKNVTSNFPEQIALAISSPT--SMWVSWVSGDAQIGSNVTPLDPSTVASDV 118
D+P++ + N P+Q+ + +M VSWV+ D +P +S V
Sbjct: 39 DMPLDSDVFRVPPGYNAPQQVHITQGDHVGKAMIVSWVTVD----------EPG--SSKV 86
Query: 119 WYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIHHVKIDGLDPGTKYYYKCGDSKI 178
Y ++ ++ GN Y+ NYTSG IHH I L+ TKYYY+ G I
Sbjct: 87 VYWSENSQHKKVARGNIRTYT-------YFNYTSGYIHHCTIRNLEYNTKYYYEVG---I 136
Query: 179 PAMSAEHVFETLPLPSPTSYPHRIAVIGDLGLTSNSSTTVDHLIQN--DPSLILMVGDLT 236
+ F T P P P+ +IGDLG + +S+ T+ H +N +L VGDL+
Sbjct: 137 GNTTRSFWFTTPPEVGP-DVPYTFGLIGDLGQSFDSNRTLTHYERNPIKGQAVLFVGDLS 195
Query: 237 YANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIE- 295
YA+ Y P + RWD WGRF+E T+ P + GNHEI+
Sbjct: 196 YADNY------------------PNHDNV--RWDTWGRFVERSTAYQPWIWTAGNHEIDF 235
Query: 296 -PQVAGIT-FKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYVDYNSTGAQYAWL 353
P++ FK + R+ VP + SGS F+Y + I+L +Y Y QY WL
Sbjct: 236 APEIGETKPFKPFTKRYHVPYKASGSTETFWYPIKRASAYIIVLSSYSAYGKYTPQYKWL 295
Query: 354 KEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHA 413
+E+L K++RT TPWL H PWYNSY+ HY E E MR E Q+ VD+VF+GHVHA
Sbjct: 296 EEELPKVNRTETPWLIVLMHSPWYNSYNYHYMEGETMRVMYEPWFVQHKVDLVFAGHVHA 355
Query: 414 YERMNRVYNYTLDAC-----------GPVYITVGDGGNIEQVDVDHADDPGKCPSAGENL 462
YER RV N D PVYIT+GDGGN+E + + D
Sbjct: 356 YERSERVSNVAYDIVNGKCTPVRDQSAPVYITIGDGGNLEGLATNMTD------------ 403
Query: 463 PEFGGVCHLNFTSGPAKGKFCWSKQPEWSAYRESSFGHGILEVVNSTYALWTWHRNQDNY 522
QPE+SA+RE+SFGH L++ N T+A ++WHRNQD Y
Sbjct: 404 -----------------------PQPEYSAFREASFGHATLDIKNRTHAYYSWHRNQDGY 440
|
Ipomoea batatas (taxid: 4120) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9SIV9|PPA10_ARATH Purple acid phosphatase 10 OS=Arabidopsis thaliana GN=PAP10 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 242 bits (618), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 171/506 (33%), Positives = 236/506 (46%), Gaps = 101/506 (19%)
Query: 47 VTRRFDPSLRRGSDDLPMNHTRLKKNVTSNFPEQIALAIS--SPTSMWVSWVSGDAQIGS 104
+T R+ L + D+P++ + N P+Q+ + ++ VSWV+ +A+ GS
Sbjct: 29 ITSRYVRKLE-ATVDMPLDSDVFRVPCGYNAPQQVHITQGDVEGKAVIVSWVTQEAK-GS 86
Query: 105 NVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIHHVKIDGLD 164
N V Y K++ K G Y NYTSG IHH I L+
Sbjct: 87 N-----------KVIYWKENSTKKHKAHGKTNTYK-------FYNYTSGFIHHCPIRNLE 128
Query: 165 PGTKYYYKCGDSKIPAMSAEHVFETLPLPSPTSYPHRIAVIGDLGLTSNSSTTVDHLIQN 224
TKYYY G + + F T P P P+ +IGDLG + +S+ T+ H +N
Sbjct: 129 YDTKYYYVLG---VGQTERKFWFFTPPEIGP-DVPYTFGLIGDLGQSYDSNITLTHY-EN 183
Query: 225 DPS---LILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRFMEPLTS 281
+P+ +L VGD++YA+ Y PD R RWD WGRF E T+
Sbjct: 184 NPTKGQAVLFVGDISYADTY---------------PDHDNR-----RWDSWGRFAERSTA 223
Query: 282 RVPMMVIEGNHEIE--PQVA-GITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLG 338
P + GNHE++ P++ FK + R+ P SGS F+YS G + I+L
Sbjct: 224 YQPWIWTTGNHELDFAPEIGENRPFKPFTHRYRTPYRSSGSTEPFWYSIKRGPAYIIVLA 283
Query: 339 AYVDYNSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALL 398
+Y Y QY WL+E+ K++RT TPWL H PWYNSY HY E E MR EA
Sbjct: 284 SYSAYGKYTPQYQWLEEEFPKVNRTETPWLIVLMHSPWYNSYDYHYMEGETMRVMYEAWF 343
Query: 399 YQYGVDIVFSGHVHAYERMNRVYNYTL-----------DACGPVYITVGDGGNIEQVDVD 447
+Y VD+VF+GHVHAYER RV N D PVYIT+GDGGNIE +
Sbjct: 344 VKYKVDVVFAGHVHAYERSERVSNIAYNVVNGICTPVKDQSAPVYITIGDGGNIEGLATK 403
Query: 448 HADDPGKCPSAGENLPEFGGVCHLNFTSGPAKGKFCWSKQPEWSAYRESSFGHGILEVVN 507
+ QP++SA+RE+SFGH I + N
Sbjct: 404 MTE-----------------------------------PQPKYSAFREASFGHAIFSIKN 428
Query: 508 STYALWTWHRNQDNYKEDSRGDHIYI 533
T+A + WHRN D Y + GD ++
Sbjct: 429 RTHAHYGWHRNHDGYAVE--GDRMWF 452
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9C510|PPA6_ARATH Purple acid phosphatase 6 OS=Arabidopsis thaliana GN=PAP6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 241 bits (615), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 177/513 (34%), Positives = 234/513 (45%), Gaps = 95/513 (18%)
Query: 26 LVVAGGTLQRIPTTLQGPFEPVTRRFDPSLRRGSDDLPMNHTRLKKNVTSNFPEQIALAI 85
LV+ I T + G +T +F +R+ + M+ N PEQ+ L
Sbjct: 4 LVIFAFLFLSITTVINGG---ITSKF---VRQALPSIEMSLDTFPSPGGYNTPEQVHLTQ 57
Query: 86 SSP--TSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYP 143
M VSWV+ GSNV +T SDV K KR +T + Y
Sbjct: 58 GDHDGRGMIVSWVTPLNLAGSNVVTYWIATNGSDV-------KPAKKRAHASTKSYRFY- 109
Query: 144 FKGLLNYTSGIIHHVKIDGLDPGTKYYYKCGDSKIPAMSAEHVFETLPLPSPTSYPHRIA 203
+Y+SG +HH I GL+ TKY Y+ G K + F T P P P+
Sbjct: 110 -----DYSSGFLHHATIKGLEYDTKYIYEVGTDK---SVRQFSFTTPPKIGP-DVPYTFG 160
Query: 204 VIGDLGLTSNSSTTVDHLIQNDP-SLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIR 262
+IGDLG T S+ T+ H + N +L GDL+YA+ D P
Sbjct: 161 IIGDLGQTYASNETLYHYMSNPKGQAVLFAGDLSYAD------------------DHPNH 202
Query: 263 ETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIE--PQVAG-ITFKSYLTRFAVPSEESGS 319
+ Q +WD WGRFMEP + P + GNHEI+ P + FK Y R+ + S S
Sbjct: 203 D--QRKWDTWGRFMEPCAAYQPFIFAAGNHEIDFVPNIGEPHAFKPYTHRYPNAYKASQS 260
Query: 320 NSNFYYSFNAGGVHFIMLGAYVDYNSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNS 379
S +YS H I+L +Y Y QY WL+++L ++R TPWL H PWYNS
Sbjct: 261 TSPLWYSVRRASAHIIVLSSYSAYGKYTPQYIWLEQELKNVNREETPWLIVIVHSPWYNS 320
Query: 380 YSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRV----YNYT-------LDAC 428
+ HY E E MR E+ L VD+V SGHVHAYER R+ YN T D
Sbjct: 321 NNYHYMEGESMRVMFESWLVNSKVDLVLSGHVHAYERSERISNIKYNITNGLSSPVKDPN 380
Query: 429 GPVYITVGDGGNIEQVDVDHADDPGKCPSAGENLPEFGGVCHLNFTSGPAKGKFCWSKQP 488
P+YIT+GDGGNIE + D QP
Sbjct: 381 APIYITIGDGGNIEGIANSFVD-----------------------------------PQP 405
Query: 489 EWSAYRESSFGHGILEVVNSTYALWTWHRNQDN 521
+SAYRE+SFGH +LE++N T+A +TWHRNQDN
Sbjct: 406 SYSAYREASFGHAVLEIMNRTHAQYTWHRNQDN 438
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 580 | ||||||
| 224072628 | 505 | predicted protein [Populus trichocarpa] | 0.870 | 1.0 | 0.865 | 0.0 | |
| 225433412 | 539 | PREDICTED: purple acid phosphatase 23 [V | 0.906 | 0.975 | 0.823 | 0.0 | |
| 297741914 | 525 | unnamed protein product [Vitis vinifera] | 0.870 | 0.961 | 0.857 | 0.0 | |
| 356573516 | 566 | PREDICTED: purple acid phosphatase 23-li | 0.956 | 0.980 | 0.781 | 0.0 | |
| 449433197 | 539 | PREDICTED: purple acid phosphatase 23-li | 0.910 | 0.979 | 0.798 | 0.0 | |
| 357496553 | 622 | Purple acid phosphatase [Medicago trunca | 0.943 | 0.879 | 0.721 | 0.0 | |
| 255554208 | 509 | Nucleotide pyrophosphatase/phosphodieste | 0.824 | 0.939 | 0.805 | 0.0 | |
| 115475688 | 622 | Os08g0280100 [Oryza sativa Japonica Grou | 0.872 | 0.813 | 0.728 | 0.0 | |
| 326499476 | 567 | predicted protein [Hordeum vulgare subsp | 0.889 | 0.910 | 0.719 | 0.0 | |
| 237847805 | 564 | chloroplast purple acid phosphatase isof | 0.889 | 0.914 | 0.719 | 0.0 |
| >gi|224072628|ref|XP_002303814.1| predicted protein [Populus trichocarpa] gi|222841246|gb|EEE78793.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 953 bits (2464), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/505 (86%), Positives = 478/505 (94%)
Query: 36 IPTTLQGPFEPVTRRFDPSLRRGSDDLPMNHTRLKKNVTSNFPEQIALAISSPTSMWVSW 95
IPTTL GPF+PVTRRFDPSLRRGSDDLPMNH RLKKN TSNFPEQI+LAISSPTSMWVSW
Sbjct: 1 IPTTLDGPFKPVTRRFDPSLRRGSDDLPMNHPRLKKNATSNFPEQISLAISSPTSMWVSW 60
Query: 96 VSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGII 155
V+G+AQIGS+V PLDP++VAS+VWYGK+SGKY S+ GN+TVY+QLYPF+GL NYTSGII
Sbjct: 61 VTGEAQIGSDVIPLDPASVASEVWYGKESGKYASRGKGNSTVYTQLYPFEGLSNYTSGII 120
Query: 156 HHVKIDGLDPGTKYYYKCGDSKIPAMSAEHVFETLPLPSPTSYPHRIAVIGDLGLTSNSS 215
HHV+IDGL+PGTKY+YKCGDS IPAMS EHVFETLPLPSP +YPHRIA+IGDLGLTSNSS
Sbjct: 121 HHVRIDGLEPGTKYFYKCGDSSIPAMSEEHVFETLPLPSPNAYPHRIAIIGDLGLTSNSS 180
Query: 216 TTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRF 275
TT+DH+I NDPS+ILMVGDLTYANQYLTTGGK A CYSCAFPDAPIRETYQPRWDGWGRF
Sbjct: 181 TTIDHVIVNDPSMILMVGDLTYANQYLTTGGKGAPCYSCAFPDAPIRETYQPRWDGWGRF 240
Query: 276 MEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFI 335
MEPL S PMMVIEGNHEIEPQV+GITFKSYLTR+AVPSEESGSNSNFYYSF+AGG+HF+
Sbjct: 241 MEPLISSSPMMVIEGNHEIEPQVSGITFKSYLTRYAVPSEESGSNSNFYYSFDAGGIHFV 300
Query: 336 MLGAYVDYNSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEME 395
MLGAYVDYNSTGAQY+WLK+DL+++DR TPWL AAWHPPWYNSYSSHYQEFECMRQEME
Sbjct: 301 MLGAYVDYNSTGAQYSWLKQDLNQVDRAKTPWLVAAWHPPWYNSYSSHYQEFECMRQEME 360
Query: 396 ALLYQYGVDIVFSGHVHAYERMNRVYNYTLDACGPVYITVGDGGNIEQVDVDHADDPGKC 455
ALLYQY VDIVFSGHVHAYERMNRVYNYTLD CGPVYITVGDGGNIE+VDVDHAD+PG C
Sbjct: 361 ALLYQYRVDIVFSGHVHAYERMNRVYNYTLDPCGPVYITVGDGGNIEKVDVDHADEPGNC 420
Query: 456 PSAGENLPEFGGVCHLNFTSGPAKGKFCWSKQPEWSAYRESSFGHGILEVVNSTYALWTW 515
PSAG+N+PEFGGVCH+NF+SGPA+GKFCW KQPEWSA+RESSFGHGILEVVNSTYALWTW
Sbjct: 421 PSAGDNIPEFGGVCHINFSSGPAEGKFCWDKQPEWSAFRESSFGHGILEVVNSTYALWTW 480
Query: 516 HRNQDNYKEDSRGDHIYIVRQPELC 540
HRNQD YK+DS GD IY+VRQPELC
Sbjct: 481 HRNQDIYKDDSHGDQIYVVRQPELC 505
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225433412|ref|XP_002283151.1| PREDICTED: purple acid phosphatase 23 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 945 bits (2442), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/534 (82%), Positives = 484/534 (90%), Gaps = 8/534 (1%)
Query: 7 LKILLAIFLITTTTTTKVVLVVAGGTLQRIPTTLQGPFEPVTRRFDPSLRRGSDDLPMNH 66
L + L IFL+ L+ +G IPTTL+GPF+PVT FD LRRGSDDLPM+H
Sbjct: 6 LCLALTIFLMIIAD-----LLTSG---DHIPTTLEGPFQPVTHSFDSRLRRGSDDLPMDH 57
Query: 67 TRLKKNVTSNFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGK 126
RL++NVTS FPEQI+LAISSPTSMWVSW++GD+QIGSNVTPLDPSTVAS+VWYGK+S K
Sbjct: 58 PRLRRNVTSFFPEQISLAISSPTSMWVSWITGDSQIGSNVTPLDPSTVASEVWYGKRSRK 117
Query: 127 YTSKRGGNATVYSQLYPFKGLLNYTSGIIHHVKIDGLDPGTKYYYKCGDSKIPAMSAEHV 186
Y+S + G +TVYSQLYPF+GLLNYTSGIIHHV++D L+PGTKYYYKCGDS PAMS E+V
Sbjct: 118 YSSVKSGFSTVYSQLYPFEGLLNYTSGIIHHVRLDDLEPGTKYYYKCGDSSFPAMSREYV 177
Query: 187 FETLPLPSPTSYPHRIAVIGDLGLTSNSSTTVDHLIQNDPSLILMVGDLTYANQYLTTGG 246
FETLPLP P YP RIAV+GDLGLTSN++TT+DHLI+NDPS+ILMVGDL+YANQY TTGG
Sbjct: 178 FETLPLPGPKRYPRRIAVVGDLGLTSNTTTTIDHLIRNDPSMILMVGDLSYANQYRTTGG 237
Query: 247 KAASCYSCAFPDAPIRETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIEPQVAGITFKSY 306
K C+SCAFPDAPIRETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIEPQVAGITFKSY
Sbjct: 238 KGVPCFSCAFPDAPIRETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIEPQVAGITFKSY 297
Query: 307 LTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYVDYNSTGAQYAWLKEDLHKLDRTVTP 366
LTRFAVPSEESGS SNFYYSF+AGGVHFIMLGAYVDYN TGAQYAWLK+DLH++DR+VTP
Sbjct: 298 LTRFAVPSEESGSKSNFYYSFDAGGVHFIMLGAYVDYNRTGAQYAWLKKDLHQVDRSVTP 357
Query: 367 WLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLD 426
WL AAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLD
Sbjct: 358 WLVAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLD 417
Query: 427 ACGPVYITVGDGGNIEQVDVDHADDPGKCPSAGENLPEFGGVCHLNFTSGPAKGKFCWSK 486
+CGPVYITVGDGGNIEQV+VDHADDPGKCPSA +N+PEFGG+CHLNF+SGPAKGKFCW +
Sbjct: 418 SCGPVYITVGDGGNIEQVEVDHADDPGKCPSAQDNIPEFGGLCHLNFSSGPAKGKFCWDQ 477
Query: 487 QPEWSAYRESSFGHGILEVVNSTYALWTWHRNQDNYKEDSRGDHIYIVRQPELC 540
QPEWSA+RESSFGHGILEVVNSTYALWTWHRNQD YK SRGD IYIVRQP LC
Sbjct: 478 QPEWSAFRESSFGHGILEVVNSTYALWTWHRNQDIYKRKSRGDQIYIVRQPHLC 531
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297741914|emb|CBI33349.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 944 bits (2439), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/505 (85%), Positives = 473/505 (93%)
Query: 36 IPTTLQGPFEPVTRRFDPSLRRGSDDLPMNHTRLKKNVTSNFPEQIALAISSPTSMWVSW 95
IPTTL+GPF+PVT FD LRRGSDDLPM+H RL++NVTS FPEQI+LAISSPTSMWVSW
Sbjct: 13 IPTTLEGPFQPVTHSFDSRLRRGSDDLPMDHPRLRRNVTSFFPEQISLAISSPTSMWVSW 72
Query: 96 VSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGII 155
++GD+QIGSNVTPLDPSTVAS+VWYGK+S KY+S + G +TVYSQLYPF+GLLNYTSGII
Sbjct: 73 ITGDSQIGSNVTPLDPSTVASEVWYGKRSRKYSSVKSGFSTVYSQLYPFEGLLNYTSGII 132
Query: 156 HHVKIDGLDPGTKYYYKCGDSKIPAMSAEHVFETLPLPSPTSYPHRIAVIGDLGLTSNSS 215
HHV++D L+PGTKYYYKCGDS PAMS E+VFETLPLP P YP RIAV+GDLGLTSN++
Sbjct: 133 HHVRLDDLEPGTKYYYKCGDSSFPAMSREYVFETLPLPGPKRYPRRIAVVGDLGLTSNTT 192
Query: 216 TTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRF 275
TT+DHLI+NDPS+ILMVGDL+YANQY TTGGK C+SCAFPDAPIRETYQPRWDGWGRF
Sbjct: 193 TTIDHLIRNDPSMILMVGDLSYANQYRTTGGKGVPCFSCAFPDAPIRETYQPRWDGWGRF 252
Query: 276 MEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFI 335
MEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGS SNFYYSF+AGGVHFI
Sbjct: 253 MEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSKSNFYYSFDAGGVHFI 312
Query: 336 MLGAYVDYNSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEME 395
MLGAYVDYN TGAQYAWLK+DLH++DR+VTPWL AAWHPPWYNSYSSHYQEFECMRQEME
Sbjct: 313 MLGAYVDYNRTGAQYAWLKKDLHQVDRSVTPWLVAAWHPPWYNSYSSHYQEFECMRQEME 372
Query: 396 ALLYQYGVDIVFSGHVHAYERMNRVYNYTLDACGPVYITVGDGGNIEQVDVDHADDPGKC 455
ALLYQYGVDIVFSGHVHAYERMNRVYNYTLD+CGPVYITVGDGGNIEQV+VDHADDPGKC
Sbjct: 373 ALLYQYGVDIVFSGHVHAYERMNRVYNYTLDSCGPVYITVGDGGNIEQVEVDHADDPGKC 432
Query: 456 PSAGENLPEFGGVCHLNFTSGPAKGKFCWSKQPEWSAYRESSFGHGILEVVNSTYALWTW 515
PSA +N+PEFGG+CHLNF+SGPAKGKFCW +QPEWSA+RESSFGHGILEVVNSTYALWTW
Sbjct: 433 PSAQDNIPEFGGLCHLNFSSGPAKGKFCWDQQPEWSAFRESSFGHGILEVVNSTYALWTW 492
Query: 516 HRNQDNYKEDSRGDHIYIVRQPELC 540
HRNQD YK SRGD IYIVRQP LC
Sbjct: 493 HRNQDIYKRKSRGDQIYIVRQPHLC 517
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356573516|ref|XP_003554904.1| PREDICTED: purple acid phosphatase 23-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 934 bits (2413), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/562 (78%), Positives = 487/562 (86%), Gaps = 7/562 (1%)
Query: 1 MGNCEALKILLAIFLITTTTTTKVVLVVAGGTLQRIPTTLQGPFEPVTRRFDPSLRRGSD 60
M C + LA L+ + +V+ VA IPTTL GPF+PVTRRFDPSLRRGSD
Sbjct: 1 MKICTTFCVSLATVLVMMS---NIVMAVAE---THIPTTLDGPFDPVTRRFDPSLRRGSD 54
Query: 61 DLPMNHTRLKKNVTSNFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWY 120
DLPM H RL+KNVTSNFPEQIALAISSPTSMWVSWV+GDAQIG NVTP+DP++V S+VWY
Sbjct: 55 DLPMTHPRLRKNVTSNFPEQIALAISSPTSMWVSWVTGDAQIGLNVTPVDPASVGSEVWY 114
Query: 121 GKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIHHVKIDGLDPGTKYYYKCGDSKIPA 180
GK+SGKYTS G++ VYSQLYPF+GL NYTSGIIHHVK+ GL+PGT+YYYKCGDS IPA
Sbjct: 115 GKKSGKYTSVGKGDSVVYSQLYPFEGLWNYTSGIIHHVKLKGLEPGTRYYYKCGDSSIPA 174
Query: 181 MSAEHVFETLPLPSPTSYPHRIAVIGDLGLTSNSSTTVDHLIQNDPSLILMVGDLTYANQ 240
MS EH FET P PSP +YP RIAVIGDLGLTSNS++T+DHL NDPS+ILMVGDLTYANQ
Sbjct: 175 MSQEHYFETFPKPSPNNYPARIAVIGDLGLTSNSTSTIDHLNYNDPSMILMVGDLTYANQ 234
Query: 241 YLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIEPQVAG 300
YLTTGGK ASCYSCAFPDAPIRETYQPRWDGWGRFMEPLTS +PMMVIEGNHEIEPQ G
Sbjct: 235 YLTTGGKGASCYSCAFPDAPIRETYQPRWDGWGRFMEPLTSEIPMMVIEGNHEIEPQAGG 294
Query: 301 ITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYVDYNSTGAQYAWLKEDLHKL 360
ITFKSYLTRFAVP+EESGS SNFYYSF+AGG+HFIMLGAYVDYNSTGAQ+AWLK+DL +
Sbjct: 295 ITFKSYLTRFAVPAEESGSKSNFYYSFDAGGIHFIMLGAYVDYNSTGAQFAWLKKDLQSV 354
Query: 361 DRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRV 420
DR+VTPWL AAWH PWYNSY+SHYQEFECMR EME LL++Y VDIVF GHVHAYERMNRV
Sbjct: 355 DRSVTPWLVAAWHSPWYNSYASHYQEFECMRLEMEELLFRYRVDIVFDGHVHAYERMNRV 414
Query: 421 YNYTLDACGPVYITVGDGGNIEQVDVDHADDPGKCPSAGENLPEFGGVCHLNFTSGPAKG 480
+NYTLD CGPVYITVGDGGNIE+VDVDHADDPGKCPSAG+N+PEFGGVC NF++GPAKG
Sbjct: 415 FNYTLDPCGPVYITVGDGGNIEKVDVDHADDPGKCPSAGDNIPEFGGVCKSNFSTGPAKG 474
Query: 481 KFCWSKQPEWSAYRESSFGHGILEVVNSTYALWTWHRNQDNYKEDSRGDHIYIVRQPELC 540
FCW+KQPEWSA+RESSFGHGILEVVNSTYALWTWHRNQDNYKE++ GD IYIVRQPELC
Sbjct: 475 NFCWNKQPEWSAFRESSFGHGILEVVNSTYALWTWHRNQDNYKENAVGDQIYIVRQPELC 534
Query: 541 F-DTPPAKQRGQQTNETAATSA 561
D Q + T ++SA
Sbjct: 535 MKDLKDPHQSLPYNSSTKSSSA 556
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449433197|ref|XP_004134384.1| PREDICTED: purple acid phosphatase 23-like [Cucumis sativus] gi|449487610|ref|XP_004157712.1| PREDICTED: purple acid phosphatase 23-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 921 bits (2381), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/530 (79%), Positives = 482/530 (90%), Gaps = 2/530 (0%)
Query: 14 FLITTTTTTKVVLVVAGGTLQRIPTTLQGPFEPVTRRFDPSLRRGSDDLPMNHTRLKKNV 73
++ + T + L+VA + IPTTL GPF PVTR FDPSLRRGSDDLPM+H RL+K V
Sbjct: 3 WMCSVTFLLIIGLIVADD--RPIPTTLDGPFLPVTRWFDPSLRRGSDDLPMDHPRLRKKV 60
Query: 74 TSNFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGG 133
+SNFPEQI+LAIS+PTSMWVSWV+GDAQIG +VT LDPS+VAS+VWYGK SGKYT+ R G
Sbjct: 61 SSNFPEQISLAISTPTSMWVSWVTGDAQIGKHVTALDPSSVASEVWYGKVSGKYTNMRRG 120
Query: 134 NATVYSQLYPFKGLLNYTSGIIHHVKIDGLDPGTKYYYKCGDSKIPAMSAEHVFETLPLP 193
+TVYSQLYPF+GLLNYTSGI+HHV+IDGL+P TKYYY+CGDS IPA+S EH+FETLPLP
Sbjct: 121 VSTVYSQLYPFEGLLNYTSGIVHHVRIDGLEPETKYYYQCGDSSIPALSKEHMFETLPLP 180
Query: 194 SPTSYPHRIAVIGDLGLTSNSSTTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYS 253
S +SYP +IA++GDLGLTSNS+TT+DHL++NDPSLILM+GDL YANQYLTTGGK ASC+S
Sbjct: 181 SKSSYPRKIAIVGDLGLTSNSTTTIDHLVENDPSLILMIGDLVYANQYLTTGGKGASCFS 240
Query: 254 CAFPDAPIRETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVP 313
CAFPDAPIRETYQPRWD WGRFMEP+ SRVPMMVIEGNHEIEPQ++GITFKSYLTRFAVP
Sbjct: 241 CAFPDAPIRETYQPRWDAWGRFMEPVISRVPMMVIEGNHEIEPQISGITFKSYLTRFAVP 300
Query: 314 SEESGSNSNFYYSFNAGGVHFIMLGAYVDYNSTGAQYAWLKEDLHKLDRTVTPWLAAAWH 373
S ESGS S+FYYSFNAGG+HF+MLGAY+DYN+TGAQ+AWLKEDL K+DRTVTPWL AAWH
Sbjct: 301 SAESGSKSSFYYSFNAGGIHFLMLGAYIDYNATGAQFAWLKEDLDKIDRTVTPWLVAAWH 360
Query: 374 PPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDACGPVYI 433
PPWYNSYSSHYQEFECMRQEME LLY++GVDIVFSGHVHAYERMNRVYNYTLD CGPVYI
Sbjct: 361 PPWYNSYSSHYQEFECMRQEMEHLLYEHGVDIVFSGHVHAYERMNRVYNYTLDPCGPVYI 420
Query: 434 TVGDGGNIEQVDVDHADDPGKCPSAGENLPEFGGVCHLNFTSGPAKGKFCWSKQPEWSAY 493
TVGDGGNIE+VDVDHADDPGKCPSA +N+PEFGGVC LN++SGPA+GKFCW+ QPEWSA+
Sbjct: 421 TVGDGGNIEKVDVDHADDPGKCPSARDNIPEFGGVCRLNYSSGPAEGKFCWNTQPEWSAF 480
Query: 494 RESSFGHGILEVVNSTYALWTWHRNQDNYKEDSRGDHIYIVRQPELCFDT 543
RESSFGHG LEV NST+ALWTWHRNQD YK+++ GD IYIVRQP+LC T
Sbjct: 481 RESSFGHGTLEVKNSTHALWTWHRNQDVYKKENHGDRIYIVRQPDLCLPT 530
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357496553|ref|XP_003618565.1| Purple acid phosphatase [Medicago truncatula] gi|355493580|gb|AES74783.1| Purple acid phosphatase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 904 bits (2335), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/592 (72%), Positives = 483/592 (81%), Gaps = 45/592 (7%)
Query: 4 CEALKILLAIFLITTTTTTKVVLVVAGGTLQRIPTTLQGPFEPVTRRFDPSLRRGSDDLP 63
C +L I+L + T + +VV+ + IPTTL GPF+PVTRRFD SLRRGSDDLP
Sbjct: 7 CMSLTIVLVMI-------TNINMVVSK---RHIPTTLDGPFKPVTRRFDSSLRRGSDDLP 56
Query: 64 MNHTRLKKNVTSNFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQ 123
M H RLK NVT NFPEQIALAISSPTSMW+SW++G +QIG NVTPLDP+++ S+VWYGK+
Sbjct: 57 MTHPRLKMNVTLNFPEQIALAISSPTSMWISWITGKSQIGLNVTPLDPASIGSEVWYGKK 116
Query: 124 SGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIHHVKIDGLDPGTKYYYKCGDSKIPAMSA 183
SGKYT+ G++ VYSQLYPF+GLLNYTSGIIHHVK++GL+PGT+YYYKCGDS IPAMS
Sbjct: 117 SGKYTNVGKGDSLVYSQLYPFEGLLNYTSGIIHHVKLEGLEPGTRYYYKCGDSSIPAMSQ 176
Query: 184 EHVFETLPLPSPTSYPHRIAVIGDLGLTSNSSTTVDHLIQNDPSLILMVGDLTYANQYLT 243
E+ FET PSP +YP RIAVIGDLGLTSNSSTTVDHL NDPS+ILM+GDLTYANQYLT
Sbjct: 177 ENYFETFAKPSPKNYPARIAVIGDLGLTSNSSTTVDHLSYNDPSMILMIGDLTYANQYLT 236
Query: 244 TGGKAASCYSCAFPDAPIRETYQPRWDGWG------------------------------ 273
TGGK ASC+SCAFPDAPIRETYQPRWDGWG
Sbjct: 237 TGGKGASCFSCAFPDAPIRETYQPRWDGWGSNCFPKLSTSVTSAYASRISSKDRWYDLLI 296
Query: 274 -----RFMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSNFYYSFN 328
RFM+PLTS+VPMMVIEGNHEIEPQ GITFKSYLTRFAVP+EESGS SNF+YSF+
Sbjct: 297 RCLTIRFMQPLTSKVPMMVIEGNHEIEPQADGITFKSYLTRFAVPAEESGSKSNFFYSFD 356
Query: 329 AGGVHFIMLGAYVDYNSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFE 388
GG+HFIMLGAYVDYN TGAQ+ WLK+DL +DR+VTPWL A HPPWYNSY+SHYQEFE
Sbjct: 357 TGGIHFIMLGAYVDYNKTGAQFDWLKKDLQNVDRSVTPWLVATMHPPWYNSYASHYQEFE 416
Query: 389 CMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDACGPVYITVGDGGNIEQVDVDH 448
CMR EMEALLYQY VDI+F+GHVHAYERMNRVYNYTLD CGP+YITVGDGGNIE+VDVDH
Sbjct: 417 CMRLEMEALLYQYRVDIIFNGHVHAYERMNRVYNYTLDPCGPIYITVGDGGNIEKVDVDH 476
Query: 449 ADDPGKCPSAGENLPEFGGVCHLNFTSGPAKGKFCWSKQPEWSAYRESSFGHGILEVVNS 508
AD+PGKCPS+G+N+PEFGGVCH NFT GPAKG FCW KQPEWSA+RESSFGHGILEVVNS
Sbjct: 477 ADEPGKCPSSGDNIPEFGGVCHSNFTFGPAKGNFCWKKQPEWSAFRESSFGHGILEVVNS 536
Query: 509 TYALWTWHRNQDNYKEDSRGDHIYIVRQPELCFDTPPAKQRGQQTNETAATS 560
TYALWTWHRNQD+YKE++ GD IYIVRQPELCF + Q +AA+S
Sbjct: 537 TYALWTWHRNQDSYKENAVGDQIYIVRQPELCFKDSKLQDSQQSLPHSAASS 588
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255554208|ref|XP_002518144.1| Nucleotide pyrophosphatase/phosphodiesterase, putative [Ricinus communis] gi|223542740|gb|EEF44277.1| Nucleotide pyrophosphatase/phosphodiesterase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 870 bits (2248), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/513 (80%), Positives = 448/513 (87%), Gaps = 35/513 (6%)
Query: 35 RIPTTLQGPFEPVTRRFDPSLRRGSDDLPMNHTRLKKNVTSNFPEQIALAISSPTSMWVS 94
+IPTTL+GPF+PVTRRFD SLRRGSDDLPM+H RL KNVT +FPEQIALA+SS TSMWVS
Sbjct: 25 KIPTTLEGPFQPVTRRFDSSLRRGSDDLPMDHPRLLKNVTGDFPEQIALALSSSTSMWVS 84
Query: 95 WVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGI 154
WV+G+AQIGSNV PLDP +VAS+VWYGK+SGKYTSK+ GN+TVYSQLYPF+GL+NYTSGI
Sbjct: 85 WVTGNAQIGSNVVPLDPGSVASEVWYGKESGKYTSKKKGNSTVYSQLYPFEGLVNYTSGI 144
Query: 155 IHHVKIDGLDPGTKYYYKCGDSKIPAMSAEHVFETLPLPSPTSYPHRIAVIGDLGLTSNS 214
IHHV IDGL+PGTKYYYKCGDS IPAMS E+ F+TLPLPSP SYPHRIAVIGDLGL+SNS
Sbjct: 145 IHHVIIDGLEPGTKYYYKCGDSSIPAMSEEYFFQTLPLPSPYSYPHRIAVIGDLGLSSNS 204
Query: 215 STTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGR 274
STT+DHL NDPSLI+MVGDLTYANQYLTTGGK C+SCAFPDAPIRETYQPRWDGWGR
Sbjct: 205 STTIDHLATNDPSLIIMVGDLTYANQYLTTGGKGVPCFSCAFPDAPIRETYQPRWDGWGR 264
Query: 275 FMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHF 334
FMEPL SRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSNFYYSF+AGG+HF
Sbjct: 265 FMEPLISRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSNFYYSFDAGGIHF 324
Query: 335 IMLGAYVDYNSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEM 394
IMLGAYVDYN+TG+QYAWLKEDL+++DRT TPWL AAWHPPWYNSYSSHYQEFECMRQEM
Sbjct: 325 IMLGAYVDYNTTGSQYAWLKEDLNQVDRTKTPWLVAAWHPPWYNSYSSHYQEFECMRQEM 384
Query: 395 EALLYQYGVDIVFSGHVHAYERMNRVYNYTLDACGPVYITVGDGGNIEQVDVDHADDPGK 454
EALLYQY VDIVFSGHVHAYER+NRVYNYTLD CGPVYITVGDGGNIEQVDV+HADD
Sbjct: 385 EALLYQYRVDIVFSGHVHAYERINRVYNYTLDPCGPVYITVGDGGNIEQVDVEHADD--- 441
Query: 455 CPSAGENLPEFGGVCHLNFTSGPAKGKFCWSKQPEWSAYRESSFGHGILEVVNSTYALWT 514
QPEWSA+RESSFGHGILEVVNSTYALWT
Sbjct: 442 --------------------------------QPEWSAFRESSFGHGILEVVNSTYALWT 469
Query: 515 WHRNQDNYKEDSRGDHIYIVRQPELCFDTPPAK 547
WHRNQD YK+DS GD IYIVRQPELC + +K
Sbjct: 470 WHRNQDIYKDDSHGDQIYIVRQPELCLLSTTSK 502
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|115475688|ref|NP_001061440.1| Os08g0280100 [Oryza sativa Japonica Group] gi|37806076|dbj|BAC99527.1| putative phytase [Oryza sativa Japonica Group] gi|113623409|dbj|BAF23354.1| Os08g0280100 [Oryza sativa Japonica Group] gi|215701419|dbj|BAG92843.1| unnamed protein product [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
Score = 818 bits (2112), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/523 (72%), Positives = 434/523 (82%), Gaps = 17/523 (3%)
Query: 36 IPTTLQGPFEPVTRRFDPSLRRGSDDLPMNHTRLKKNVTSNFPEQIALAISS-PTSMWVS 94
IPTTL GPFEP TR FD +LR+GSDD+P+ RL PEQIALA SS TS+WVS
Sbjct: 36 IPTTLDGPFEPATRAFDRALRQGSDDVPLTDPRLAPRARPPAPEQIALAASSDATSVWVS 95
Query: 95 WVSGDAQIGSNVTPLDPSTVASDVWY-----------GKQSGKYTSKRGGNATVYSQLYP 143
WV+G+AQ+GS++TPLDPSTV S+VWY G SG Y G A VYSQLYP
Sbjct: 96 WVTGEAQVGSHLTPLDPSTVRSEVWYSERPSPTAAAAGDVSGHYPHVARGKAEVYSQLYP 155
Query: 144 FKGLLNYTSGIIHHVKIDGLDPGTKYYYKCGDSKI---PAMSAEHVFETLPLPSPTSYPH 200
+ GLLNYTSG IHHV++ GL P T+YYY+CGDS + +S E FETLP + +YP
Sbjct: 156 YPGLLNYTSGAIHHVRLRGLRPATRYYYRCGDSSVRGGAGLSGELSFETLPSSAAAAYPR 215
Query: 201 RIAVIGDLGLTSNSSTTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAP 260
R+AV+GDLGLT NS++TV+HL +NDPSL+++VGD+TYANQY TTGG+ C+SC+FPDAP
Sbjct: 216 RVAVVGDLGLTGNSTSTVEHLARNDPSLVVVVGDMTYANQYRTTGGRGVPCFSCSFPDAP 275
Query: 261 IRETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIEPQVAG--ITFKSYLTRFAVPSEESG 318
+RE+YQPRWDGWGRFMEPLTSR+PMMVIEGNHEIEPQ G +TF SYL RFAVPSEESG
Sbjct: 276 LRESYQPRWDGWGRFMEPLTSRIPMMVIEGNHEIEPQGQGGAVTFASYLARFAVPSEESG 335
Query: 319 SNSNFYYSFNAGGVHFIMLGAYVDYNSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYN 378
SN+ FYYSFNAGG+HFIMLGAYVDYN TGAQY+WL++DL K+DR VTPW+ AAWHPPWYN
Sbjct: 336 SNTKFYYSFNAGGIHFIMLGAYVDYNRTGAQYSWLEKDLRKIDRRVTPWVVAAWHPPWYN 395
Query: 379 SYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDACGPVYITVGDG 438
SYSSHYQEFECMRQ ME LLYQ+GVDIVFSGHVHAYERMNRV+NYTLD CGPVYIT+GDG
Sbjct: 396 SYSSHYQEFECMRQAMEGLLYQHGVDIVFSGHVHAYERMNRVFNYTLDPCGPVYITIGDG 455
Query: 439 GNIEQVDVDHADDPGKCPSAGENLPEFGGVCHLNFTSGPAKGKFCWSKQPEWSAYRESSF 498
GNIE++D+DHADDPGKCP G+N PEFGGVCHLNFTSGPAKGKFCW KQPEWSA+RESSF
Sbjct: 456 GNIEKIDIDHADDPGKCPGPGDNHPEFGGVCHLNFTSGPAKGKFCWEKQPEWSAFRESSF 515
Query: 499 GHGILEVVNSTYALWTWHRNQDNYKEDSRGDHIYIVRQPELCF 541
GHGILEVVNSTYALWTWHRNQD Y EDS GD IYIVRQP+ C
Sbjct: 516 GHGILEVVNSTYALWTWHRNQDAYGEDSVGDQIYIVRQPDKCL 558
|
Source: Oryza sativa Japonica Group Species: Oryza sativa Genus: Oryza Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|326499476|dbj|BAJ86049.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326513034|dbj|BAK03424.1| predicted protein [Hordeum vulgare subsp. vulgare] | Back alignment and taxonomy information |
|---|
Score = 813 bits (2101), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/528 (71%), Positives = 439/528 (83%), Gaps = 12/528 (2%)
Query: 26 LVVAGGTLQRIPTTLQGPFEPVTRRFDPSLRRGSDDLPMNHTRLKKNVTSNFPEQIALAI 85
L+V GG IPTTL GPF P TR FD SLRRGS+D+P++ RL PEQIALA
Sbjct: 35 LLVDGGG---IPTTLDGPFTPATRAFDRSLRRGSEDVPLSDPRLAPRARPPSPEQIALAA 91
Query: 86 SS-PTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGK-----YTSKRGGNATVYS 139
S+ P S+WVSWV+G AQIGS++TPLDP+ + S+VWYG++ + G+A VYS
Sbjct: 92 SADPISLWVSWVTGRAQIGSHLTPLDPTAIRSEVWYGERPASADTVGHPHVARGSAEVYS 151
Query: 140 QLYPFKGLLNYTSGIIHHVKIDGLDPGTKYYYKCGDSKIPA-MSAEHVFETLPLPSPTSY 198
QLYP+ GLLNYTSG+IHHV++ GL P T+YYY+CGDS + +S E F TLP P+P +Y
Sbjct: 152 QLYPYPGLLNYTSGVIHHVRLVGLRPSTRYYYRCGDSSLKGGLSDERSFRTLPAPAPDAY 211
Query: 199 PHRIAVIGDLGLTSNSSTTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPD 258
P R+AV+GDLGLT NS++TVDHL +NDPS+ILMVGD+TYANQYLTTGG+ C+SC+FPD
Sbjct: 212 PRRVAVVGDLGLTGNSTSTVDHLARNDPSMILMVGDMTYANQYLTTGGRGVPCFSCSFPD 271
Query: 259 APIRETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIEPQVAG--ITFKSYLTRFAVPSEE 316
APIRE+YQPRWDGWGRFMEPLTS+VPMMV EGNHEIEPQ G +TF SYL RFAVPSEE
Sbjct: 272 APIRESYQPRWDGWGRFMEPLTSKVPMMVTEGNHEIEPQGHGGAVTFASYLARFAVPSEE 331
Query: 317 SGSNSNFYYSFNAGGVHFIMLGAYVDYNSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPPW 376
SGSN+ FYYSFNAGG+HFIMLGAYVDYN TGAQY+WL++DL K+DR VTPW+ A+WH PW
Sbjct: 332 SGSNTKFYYSFNAGGIHFIMLGAYVDYNRTGAQYSWLEKDLQKVDRRVTPWVVASWHSPW 391
Query: 377 YNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDACGPVYITVG 436
YNS SSHYQEFECMRQEME LLYQ+GVDIVFSGHVHAYERMNRV+NYTLD+CGPVYIT+G
Sbjct: 392 YNSCSSHYQEFECMRQEMEGLLYQHGVDIVFSGHVHAYERMNRVFNYTLDSCGPVYITIG 451
Query: 437 DGGNIEQVDVDHADDPGKCPSAGENLPEFGGVCHLNFTSGPAKGKFCWSKQPEWSAYRES 496
DGGNIE++D DHADDPG CPS G+N PEFGGVCHLNFTSGPAKGKFCW +QPEWSA+RES
Sbjct: 452 DGGNIEKIDTDHADDPGSCPSPGDNQPEFGGVCHLNFTSGPAKGKFCWERQPEWSAFRES 511
Query: 497 SFGHGILEVVNSTYALWTWHRNQDNYKEDSRGDHIYIVRQPELCFDTP 544
SFGHGILEVVNSTYALWTWHRNQD Y E S GD IYIVR+P+ C P
Sbjct: 512 SFGHGILEVVNSTYALWTWHRNQDTYGEHSVGDEIYIVREPDKCLLQP 559
|
Source: Hordeum vulgare subsp. vulgare Species: Hordeum vulgare Genus: Hordeum Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|237847805|gb|ACR23334.1| chloroplast purple acid phosphatase isoform c [Hordeum vulgare] | Back alignment and taxonomy information |
|---|
Score = 813 bits (2101), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/528 (71%), Positives = 439/528 (83%), Gaps = 12/528 (2%)
Query: 26 LVVAGGTLQRIPTTLQGPFEPVTRRFDPSLRRGSDDLPMNHTRLKKNVTSNFPEQIALAI 85
L+V GG IPTTL GPF P TR FD SLRRGS+D+P++ RL PEQIALA
Sbjct: 32 LLVDGGG---IPTTLDGPFTPATRAFDRSLRRGSEDVPLSDPRLAPRARPPSPEQIALAA 88
Query: 86 SS-PTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGK-----YTSKRGGNATVYS 139
S+ P S+WVSWV+G AQIGS++TPLDP+ + S+VWYG++ + G+A VYS
Sbjct: 89 SADPISLWVSWVTGRAQIGSHLTPLDPTAIRSEVWYGERPASADTVGHPHVARGSAEVYS 148
Query: 140 QLYPFKGLLNYTSGIIHHVKIDGLDPGTKYYYKCGDSKIPA-MSAEHVFETLPLPSPTSY 198
QLYP+ GLLNYTSG+IHHV++ GL P T+YYY+CGDS + +S E F TLP P+P +Y
Sbjct: 149 QLYPYPGLLNYTSGVIHHVRLVGLRPSTRYYYRCGDSSLKGGLSDERSFRTLPAPAPDAY 208
Query: 199 PHRIAVIGDLGLTSNSSTTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPD 258
P R+AV+GDLGLT NS++TVDHL +NDPS+ILMVGD+TYANQYLTTGG+ C+SC+FPD
Sbjct: 209 PRRVAVVGDLGLTGNSTSTVDHLARNDPSMILMVGDMTYANQYLTTGGRGVPCFSCSFPD 268
Query: 259 APIRETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIEPQVAG--ITFKSYLTRFAVPSEE 316
APIRE+YQPRWDGWGRFMEPLTS+VPMMV EGNHEIEPQ G +TF SYL RFAVPSEE
Sbjct: 269 APIRESYQPRWDGWGRFMEPLTSKVPMMVTEGNHEIEPQGHGGAVTFASYLARFAVPSEE 328
Query: 317 SGSNSNFYYSFNAGGVHFIMLGAYVDYNSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPPW 376
SGSN+ FYYSFNAGG+HFIMLGAYVDYN TGAQY+WL++DL K+DR VTPW+ A+WH PW
Sbjct: 329 SGSNTKFYYSFNAGGIHFIMLGAYVDYNRTGAQYSWLEKDLQKVDRRVTPWVVASWHSPW 388
Query: 377 YNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDACGPVYITVG 436
YNS SSHYQEFECMRQEME LLYQ+GVDIVFSGHVHAYERMNRV+NYTLD+CGPVYIT+G
Sbjct: 389 YNSCSSHYQEFECMRQEMEGLLYQHGVDIVFSGHVHAYERMNRVFNYTLDSCGPVYITIG 448
Query: 437 DGGNIEQVDVDHADDPGKCPSAGENLPEFGGVCHLNFTSGPAKGKFCWSKQPEWSAYRES 496
DGGNIE++D DHADDPG CPS G+N PEFGGVCHLNFTSGPAKGKFCW +QPEWSA+RES
Sbjct: 449 DGGNIEKIDTDHADDPGSCPSPGDNQPEFGGVCHLNFTSGPAKGKFCWERQPEWSAFRES 508
Query: 497 SFGHGILEVVNSTYALWTWHRNQDNYKEDSRGDHIYIVRQPELCFDTP 544
SFGHGILEVVNSTYALWTWHRNQD Y E S GD IYIVR+P+ C P
Sbjct: 509 SFGHGILEVVNSTYALWTWHRNQDTYGEHSVGDEIYIVREPDKCLLQP 556
|
Source: Hordeum vulgare Species: Hordeum vulgare Genus: Hordeum Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 580 | ||||||
| TAIR|locus:2098500 | 532 | PAP15 "purple acid phosphatase | 0.860 | 0.937 | 0.593 | 7.4e-169 | |
| TAIR|locus:2046407 | 545 | PAP13 "purple acid phosphatase | 0.856 | 0.911 | 0.486 | 4.2e-127 | |
| TAIR|locus:2083218 | 437 | PAP21 "purple acid phosphatase | 0.318 | 0.423 | 0.486 | 8e-77 | |
| TAIR|locus:2083288 | 427 | PAP20 [Arabidopsis thaliana (t | 0.332 | 0.451 | 0.456 | 8e-77 | |
| TAIR|locus:2085770 | 437 | PAP18 "purple acid phosphatase | 0.372 | 0.494 | 0.441 | 3.1e-66 | |
| TAIR|locus:2083238 | 434 | PAP22 "purple acid phosphatase | 0.479 | 0.640 | 0.406 | 1.4e-58 | |
| TAIR|locus:2184657 | 475 | PAP26 "AT5G34850" [Arabidopsis | 0.386 | 0.471 | 0.361 | 7.1e-56 | |
| TAIR|locus:2115345 | 466 | PAP25 "purple acid phosphatase | 0.413 | 0.515 | 0.354 | 3.6e-51 | |
| TAIR|locus:2042689 | 468 | PAP10 "AT2G16430" [Arabidopsis | 0.408 | 0.506 | 0.381 | 1.4e-50 | |
| TAIR|locus:2010753 | 466 | PAP6 "purple acid phosphatase | 0.408 | 0.508 | 0.359 | 6.8e-49 |
| TAIR|locus:2098500 PAP15 "purple acid phosphatase 15" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1642 (583.1 bits), Expect = 7.4e-169, P = 7.4e-169
Identities = 301/507 (59%), Positives = 373/507 (73%)
Query: 36 IPTTLQGPFEPVTRRFDPSLRRGSDDLPMNHTRLKKNVTSNFPEQIALAISSP-TSMWVS 94
IP+TL GPF PVT D SLR + DLP R+++ V PEQI+L++SS S+WVS
Sbjct: 22 IPSTLDGPFVPVTVPLDTSLRGQAIDLPDTDPRVRRRVIGFEPEQISLSLSSDHDSIWVS 81
Query: 95 WVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGI 154
W++G+ QIG V PLDP+++ S V +G + + G++ VYSQLYPF GLLNYTSGI
Sbjct: 82 WITGEFQIGKKVKPLDPTSINSVVQFGTLRHSLSHEAKGHSLVYSQLYPFDGLLNYTSGI 141
Query: 155 IHHVKIDGLDPGTKYYYKCGDSKIPAMSAEHVFETLPLPSPTSYPHRIAVIGDLGLTSNS 214
IHHV+I GL P T YYY+CGD AMS H F T+P+ SP+SYP RIAV+GDLGLT N+
Sbjct: 142 IHHVRITGLKPSTIYYYRCGDPSRRAMSKIHHFRTMPVSSPSSYPGRIAVVGDLGLTYNT 201
Query: 215 STTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGR 274
+ T+ HLI N P LIL++GD++YAN YLT G ++ CYSC+FP+ PI ETYQPRWD WGR
Sbjct: 202 TDTISHLIHNSPDLILLIGDVSYANLYLTNG-TSSDCYSCSFPETPIHETYQPRWDYWGR 260
Query: 275 FMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPXXXXXXXXXXXXXXNAGGVHF 334
FME LTS+VP+MVIEGNHEIE Q TF++Y +RFA P NAGG+HF
Sbjct: 261 FMENLTSKVPLMVIEGNHEIELQAENKTFEAYSSRFAFPFNESGSSSTLYYSFNAGGIHF 320
Query: 335 IMLGAYVDYNSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEM 394
+MLGAY+ Y+ + QY WLK+DL K+DR+VTPWL A+WHPPWY+SY++HY+E ECM++ M
Sbjct: 321 VMLGAYIAYDKSAEQYEWLKKDLAKVDRSVTPWLVASWHPPWYSSYTAHYREAECMKEAM 380
Query: 395 EALLYQYGVDIVFSGHVHAYERMNRVYNYTLDACGPVYITVGDGGNIEQVDVDHADDPGK 454
E LLY YG DIVF+GHVHAYER NRVYNY LD CGPVYI +GDGGN E++ ++HADDPGK
Sbjct: 381 EELLYSYGTDIVFNGHVHAYERSNRVYNYELDPCGPVYIVIGDGGNREKMAIEHADDPGK 440
Query: 455 CPSAGENL-PEFGGVCHLNFTSGPAKGKFCWSKQPEWSAYRESSFGHGILEVVNSTYALW 513
CP P GG C NFT P+ KFCW +QP++SA RESSFGHGILE+ N T+ALW
Sbjct: 441 CPEPLTTPDPVMGGFCAWNFT--PSD-KFCWDRQPDYSALRESSFGHGILEMKNETWALW 497
Query: 514 TWHRNQDNYKEDSRGDHIYIVRQPELC 540
TW+RNQD+ E GD IYIVRQP+ C
Sbjct: 498 TWYRNQDSSSEV--GDQIYIVRQPDRC 522
|
|
| TAIR|locus:2046407 PAP13 "purple acid phosphatase 13" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1248 (444.4 bits), Expect = 4.2e-127, P = 4.2e-127
Identities = 254/522 (48%), Positives = 329/522 (63%)
Query: 37 PTTLQGPFEPVTRRFDPSLRRGSDDLPMNHTRLKKNVTSNF-PEQIALAIS-SPTSMWVS 94
P+TL GP PVT DP+L + DLP + K ++ PEQI++++S S S+W+S
Sbjct: 27 PSTLDGPLNPVTAPLDPNLNPIAFDLPESDPSFVKPISEFLLPEQISVSLSYSFDSVWIS 86
Query: 95 WVSGDAQIGS-NVTPLDPSTVASDVWYGKQSGKYTSKRG--GNATVYSQLYPFK-GLLNY 150
WV+G+ QIG + PLDP+ V S V Y + + T K+ G++ VY+Q Y + G +NY
Sbjct: 87 WVTGEYQIGEKDSAPLDPNCVQSIVQYREFDVRRTRKQNATGHSIVYNQQYSSENGFMNY 146
Query: 151 TSGIIHHVKIDGLDPGTKYYYKCGDSKIPAMSAEHVFETLPLPSPTSYPHRIAVIGDLGL 210
TSGIIHHV++ GL P T Y Y+CGD + AMS E+ F T+P + +YPHRI V GDLGL
Sbjct: 147 TSGIIHHVQLTGLKPNTLYRYQCGDPSLSAMSKEYYFRTMPKSTSENYPHRIVVAGDLGL 206
Query: 211 TSNSSTTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSC------AFPDA----P 260
T N+ST + H++ N P L++++G +YA+ YL K C SC D
Sbjct: 207 TYNTSTVLGHILSNHPDLVVLLGGFSYADTYLANKTKL-DCSSCHCDQNGTSSDCGSCYS 265
Query: 261 IRETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIEPQVAG-ITFKSYLTRFAVPXXXXXX 319
ETYQPRWD WGRFMEPLT+ VP M++ G HEIEPQ +TF +Y +RFA P
Sbjct: 266 SGETYQPRWDYWGRFMEPLTANVPTMMVAGEHEIEPQTENNLTFAAYSSRFAFPSNESGS 325
Query: 320 XXXXXXXXNAGGVHFIMLGAYVDYNSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNS 379
NAGG HFI+L +Y Y+++ QY WL+ DL K++R+ TPW+ A W PWY++
Sbjct: 326 FSPLYYSFNAGGAHFIVLNSYTLYDNSSDQYIWLESDLIKINRSETPWVVATWSLPWYST 385
Query: 380 YSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDACGPVYITVGDGG 439
+ HY+E E MR +E LLY Y VDIVF+ HV AYER NRVYNYTLD CGPVYIT G GG
Sbjct: 386 FKGHYREAESMRIHLEDLLYNYRVDIVFNSHVDAYERSNRVYNYTLDQCGPVYITTGAGG 445
Query: 440 NIEQVDVDHADDPGKCPSAGENLP-EFGGVCHLNFTSGPAKGKFCWSKQPEWSAYRESSF 498
+++ H DDPG P +N G LN T P K + C KQPE+SAYRESSF
Sbjct: 446 -AGKLETQHVDDPGNIPDPSQNYSCRSSG---LNSTLEPVKDETCPVKQPEYSAYRESSF 501
Query: 499 GHGILEVVNSTYALWTWHRNQDNYKEDSRGDHIYIVRQPELC 540
G GILEV N T+ALW+W+RNQD Y D I+IVRQPE+C
Sbjct: 502 GFGILEVKNETHALWSWNRNQDLYY--LAADVIHIVRQPEMC 541
|
|
| TAIR|locus:2083218 PAP21 "purple acid phosphatase 21" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 488 (176.8 bits), Expect = 8.0e-77, Sum P(3) = 8.0e-77
Identities = 91/187 (48%), Positives = 114/187 (60%)
Query: 258 DAPIRETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIE--PQVAGITFKSYLTRFAVPXX 315
D +T+QP WD +GR +E L S P MV EGNHEIE P I+FKSY R+ +P
Sbjct: 179 DLSYADTHQPLWDSFGRLLETLASTRPWMVTEGNHEIESFPTNDHISFKSYNARWLMPHA 238
Query: 316 XXXXXXXXXXXXNAGGVHFIMLGAYVDYNSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPP 375
+ GVH +MLG+Y Y S QY WL+ DL K+DR TPWL H P
Sbjct: 239 ESLSHSNLYYSFDVAGVHTVMLGSYTPYESHSDQYHWLQADLRKVDRKKTPWLVVVMHTP 298
Query: 376 WYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDACGPVYITV 435
WY++ +HY E E MR +E+LLY+ VD+VF+GHVH YER +YN D CGP+YIT+
Sbjct: 299 WYSTNKAHYGEGEKMRSALESLLYRAQVDVVFAGHVHTYERFKPIYNKKADPCGPMYITI 358
Query: 436 GDGGNIE 442
GDGGN E
Sbjct: 359 GDGGNRE 365
|
|
| TAIR|locus:2083288 PAP20 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 474 (171.9 bits), Expect = 8.0e-77, Sum P(3) = 8.0e-77
Identities = 90/197 (45%), Positives = 116/197 (58%)
Query: 258 DAPIRETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIE--PQVAGITFKSYLTRFAVPXX 315
D YQP WD +GR ++PL S+ P MV GNHE+E P + F +Y R+ +P
Sbjct: 174 DLSYANMYQPLWDTFGRLVQPLASQRPWMVTHGNHELEKIPILHSNPFTAYNKRWRMPFE 233
Query: 316 XXXXXXXXXXXXNAGGVHFIMLGAYVDYNSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPP 375
N GVH IMLG+Y D+ QY WL+ +L K+DR TPW+ A H P
Sbjct: 234 ESGSSSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAP 293
Query: 376 WYNSYSSHYQEFEC--MRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDACGPVYI 433
WYNS +H E E M++ ME LLY+ VD+VF+GHVHAYER +RVY D CGPVYI
Sbjct: 294 WYNSNEAHQGEKESVEMKESMETLLYKARVDLVFAGHVHAYERFSRVYQDKFDKCGPVYI 353
Query: 434 TVGDGGNIEQVDVDHAD 450
+GDGGN+E + + D
Sbjct: 354 NIGDGGNLEGLATKYRD 370
|
|
| TAIR|locus:2085770 PAP18 "purple acid phosphatase 18" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 453 (164.5 bits), Expect = 3.1e-66, Sum P(3) = 3.1e-66
Identities = 98/222 (44%), Positives = 123/222 (55%)
Query: 226 PSLILMVGDLTYANQYLTTGGKAASC-YSC-AFP-DAPIRETYQPRWDGWGRFMEPLTSR 282
P + GDL +T C Y+ P D + Q +WD +G ++PL S
Sbjct: 140 PITFAVAGDLGQTGWTKSTLDHIDQCKYAVHLLPGDLSYADYMQHKWDTFGELVQPLASV 199
Query: 283 VPMMVIEGNHEIE--PQVAGITFKSYLTRFAVPXXXXXXXXXXXXXXNAGGVHFIMLGAY 340
P MV +GNHE E P + F S+ +R+ +P GVH IMLG+Y
Sbjct: 200 RPWMVTQGNHEKESIPFIVD-EFVSFNSRWKMPYEESGSNSNLYYSFEVAGVHAIMLGSY 258
Query: 341 VDYNSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQ 400
DY+ QY+WLK DL K+DR TPWL +H PWYNS ++H E + M EME LLY
Sbjct: 259 TDYDRYSDQYSWLKADLSKVDRERTPWLIVLFHVPWYNSNNAHQHEGDEMMAEMEPLLYA 318
Query: 401 YGVDIVFSGHVHAYERMNRVYNYTLDACGPVYITVGDGGNIE 442
GVDIVF+GHVHAYER RV N D CGPV+IT+GDGGN E
Sbjct: 319 SGVDIVFTGHVHAYERTKRVNNGKSDPCGPVHITIGDGGNRE 360
|
|
| TAIR|locus:2083238 PAP22 "purple acid phosphatase 22" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 511 (184.9 bits), Expect = 1.4e-58, Sum P(2) = 1.4e-58
Identities = 124/305 (40%), Positives = 159/305 (52%)
Query: 159 KIDGLDPG--TKY---YYKCGDSKIPAMSAEHVFETLPLPSPTSYPHRIAVIG-DLGLTS 212
K DG G T Y +YK G KI HV + PL + T+Y +R G + +
Sbjct: 83 KYDGKATGECTSYKYFFYKSG--KI-----HHV-KIGPLQANTTYYYRCGGNGPEFSFKT 134
Query: 213 NSSTTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAF--P-DAPIRETYQPRW 269
ST P +VGDL T S F P D +T+QP W
Sbjct: 135 PPSTF--------PVEFAIVGDLGQTEWTAATLSHINSQDYDVFLLPGDLSYADTHQPLW 186
Query: 270 DGWGRFMEPLTSRVPMMVIEGNHEIE--PQVAGITFKSYLTRFAVPXXXXXXXXXXXXXX 327
D +GR +EPL S+ P MV EGNHEIE P + TFKSY R+ +P
Sbjct: 187 DSFGRLVEPLASKRPWMVTEGNHEIEFFPIIEHTTFKSYNARWLMPHTESFSTSNLYYSF 246
Query: 328 NAGGVHFIMLGAYVDYNSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEF 387
+ GVH +MLG+Y D++ QY WL+ DL K+DR TPW+ H PWYN+ +H E
Sbjct: 247 DVAGVHTVMLGSYTDFDCESDQYQWLQADLAKVDRKTTPWVVVLLHAPWYNTNEAHEGEG 306
Query: 388 ECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDACGPVYITVGDGGNIEQVDVD 447
E MR+ ME+LL+ VD+VFSGHVHAYER RVYN D CGP++IT+GDGGN E + +
Sbjct: 307 ESMREAMESLLFNARVDVVFSGHVHAYERFKRVYNNKADPCGPIHITIGDGGNREGLALS 366
Query: 448 HADDP 452
P
Sbjct: 367 FKKPP 371
|
|
| TAIR|locus:2184657 PAP26 "AT5G34850" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 416 (151.5 bits), Expect = 7.1e-56, Sum P(3) = 7.1e-56
Identities = 93/257 (36%), Positives = 135/257 (52%)
Query: 200 HRIAVIGDLGLTSNSSTTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDA 259
++ +IGD+G T NS +T++H +++ +L +GDL+YA++Y + D
Sbjct: 155 YKFGIIGDMGQTFNSLSTLEHYMESGAQAVLFLGDLSYADRY-------------QYNDV 201
Query: 260 PIRETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIE--PQVAGIT-FKSYLTRFAVPXXX 316
+R WD WGRF+E T+ P + GNHE++ P + +T F++YL R+ P
Sbjct: 202 GVR------WDSWGRFVERSTAYQPWLWSAGNHEVDYMPYMGEVTPFRNYLQRYTTPYLA 255
Query: 317 XXXXXXXXXXXNAGGVHFIMLGAYVDYNSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPPW 376
H I+L +Y + Q+ WL E+L ++DR TPWL H P
Sbjct: 256 SKSSSPLWYAVRRASAHIIVLSSYSPFVKYTPQWHWLSEELTRVDREKTPWLIVLMHVPI 315
Query: 377 YNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRV----YN------YTL- 425
YNS +H+ E E MR E Q+ VD++F+GHVHAYER R+ YN Y +
Sbjct: 316 YNSNEAHFMEGESMRAAFEEWFVQHKVDVIFAGHVHAYERSYRISNVRYNVSSGDRYPVP 375
Query: 426 DACGPVYITVGDGGNIE 442
D PVYITVGDGGN E
Sbjct: 376 DKSAPVYITVGDGGNQE 392
|
|
| TAIR|locus:2115345 PAP25 "purple acid phosphatase 25" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 372 (136.0 bits), Expect = 3.6e-51, Sum P(3) = 3.6e-51
Identities = 97/274 (35%), Positives = 129/274 (47%)
Query: 199 PHRIAVIGDLGLTSNSSTTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPD 258
P+ +IGDLG T S+ T+ H + N P Q + G + Y+ D
Sbjct: 156 PYTFGIIGDLGQTLASNETLYHYMSN-PK-----------GQAVLFPGDLS--YA---DD 198
Query: 259 APIRETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIE--PQVAGI-TFKSYLTRFAVPXX 315
P + Q +WD WGRF+EP + + GNHEI+ P + FK Y+ R+
Sbjct: 199 HPNHD--QRKWDSWGRFVEPCAAYQTFIYAAGNHEIDFVPNIGEPHAFKPYIHRYHNAYK 256
Query: 316 XXXXXXXXXXXXNAGGVHFIMLGAYVDYNSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPP 375
H I+L +Y Y QY WL+++L K++R TPWL H P
Sbjct: 257 ASKSISPLWYSIRRASAHIIVLSSYSAYGKYTPQYVWLEQELKKVNREETPWLIVMVHSP 316
Query: 376 WYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRV----YNYT------- 424
WYNS + HY E E MR E+ VD+V SGHVH+YER RV YN T
Sbjct: 317 WYNSNNYHYMEGESMRAMFESWFVNSKVDLVLSGHVHSYERSERVSNIKYNITNGLSYPV 376
Query: 425 LDACGPVYITVGDGGNIEQVDVDHADDPGKCPSA 458
D P+YIT+GDGGNIE + + DP SA
Sbjct: 377 KDPSAPIYITIGDGGNIEGI-ANSFTDPQPSYSA 409
|
|
| TAIR|locus:2042689 PAP10 "AT2G16430" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 418 (152.2 bits), Expect = 1.4e-50, Sum P(2) = 1.4e-50
Identities = 103/270 (38%), Positives = 134/270 (49%)
Query: 187 FETLPLPSPTSYPHRIAVIGDLGLTSNSSTTVDHLIQNDPSLILMVGDLTYANQYLTTGG 246
F T P P P+ +IGDLG + +S+ T+ H +N+P T L G
Sbjct: 148 FFTPPEIGP-DVPYTFGLIGDLGQSYDSNITLTHY-ENNP---------TKGQAVLFVGD 196
Query: 247 KAASCYSCAFPDAPIRETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIE--PQVA-GITF 303
+ Y+ +PD R RWD WGRF E T+ P + GNHE++ P++ F
Sbjct: 197 IS---YADTYPDHDNR-----RWDSWGRFAERSTAYQPWIWTTGNHELDFAPEIGENRPF 248
Query: 304 KSYLTRFAVPXXXXXXXXXXXXXXNAGGVHFIMLGAYVDYNSTGAQYAWLKEDLHKLDRT 363
K + R+ P G + I+L +Y Y QY WL+E+ K++RT
Sbjct: 249 KPFTHRYRTPYRSSGSTEPFWYSIKRGPAYIIVLASYSAYGKYTPQYQWLEEEFPKVNRT 308
Query: 364 VTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYN- 422
TPWL H PWYNSY HY E E MR EA +Y VD+VF+GHVHAYER RV N
Sbjct: 309 ETPWLIVLMHSPWYNSYDYHYMEGETMRVMYEAWFVKYKVDVVFAGHVHAYERSERVSNI 368
Query: 423 -YTL---------DACGPVYITVGDGGNIE 442
Y + D PVYIT+GDGGNIE
Sbjct: 369 AYNVVNGICTPVKDQSAPVYITIGDGGNIE 398
|
|
| TAIR|locus:2010753 PAP6 "purple acid phosphatase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 379 (138.5 bits), Expect = 6.8e-49, Sum P(2) = 6.8e-49
Identities = 97/270 (35%), Positives = 126/270 (46%)
Query: 189 TLPLPSPTSYPHRIAVIGDLGLTSNSSTTVDHLIQNDPSLILMVGDLTYANQYLTTGGKA 248
T P P+ +IGDLG T S+ T+ H + N P Q + G
Sbjct: 146 TTPPKIGPDVPYTFGIIGDLGQTYASNETLYHYMSN-PK-----------GQAVLFAGDL 193
Query: 249 ASCYSCAFPDAPIRETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIE--PQVAGI-TFKS 305
+ Y+ D P + Q +WD WGRFMEP + P + GNHEI+ P + FK
Sbjct: 194 S--YA---DDHPNHD--QRKWDTWGRFMEPCAAYQPFIFAAGNHEIDFVPNIGEPHAFKP 246
Query: 306 YLTRFAVPXXXXXXXXXXXXXXNAGGVHFIMLGAYVDYNSTGAQYAWLKEDLHKLDRTVT 365
Y R+ H I+L +Y Y QY WL+++L ++R T
Sbjct: 247 YTHRYPNAYKASQSTSPLWYSVRRASAHIIVLSSYSAYGKYTPQYIWLEQELKNVNREET 306
Query: 366 PWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRV----Y 421
PWL H PWYNS + HY E E MR E+ L VD+V SGHVHAYER R+ Y
Sbjct: 307 PWLIVIVHSPWYNSNNYHYMEGESMRVMFESWLVNSKVDLVLSGHVHAYERSERISNIKY 366
Query: 422 NYT-------LDACGPVYITVGDGGNIEQV 444
N T D P+YIT+GDGGNIE +
Sbjct: 367 NITNGLSSPVKDPNAPIYITIGDGGNIEGI 396
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q6TPH1 | PPA23_ARATH | 3, ., 1, ., 3, ., 2 | 0.7617 | 0.7620 | 0.9650 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 580 | |||
| PLN02533 | 427 | PLN02533, PLN02533, probable purple acid phosphata | 1e-107 | |
| cd00839 | 294 | cd00839, MPP_PAPs, purple acid phosphatases of the | 1e-104 | |
| pfam00149 | 185 | pfam00149, Metallophos, Calcineurin-like phosphoes | 2e-20 | |
| pfam14008 | 62 | pfam14008, Metallophos_C, Iron/zinc purple acid ph | 8e-14 | |
| cd00838 | 131 | cd00838, MPP_superfamily, metallophosphatase super | 3e-08 | |
| cd07378 | 277 | cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 | 3e-07 | |
| cd07395 | 262 | cd07395, MPP_CSTP1, Homo sapiens CSTP1 and related | 3e-06 | |
| COG1409 | 301 | COG1409, Icc, Predicted phosphohydrolases [General | 6e-05 | |
| cd07402 | 240 | cd07402, MPP_GpdQ, Enterobacter aerogenes GpdQ and | 0.003 |
| >gnl|CDD|215292 PLN02533, PLN02533, probable purple acid phosphatase | Back alignment and domain information |
|---|
Score = 327 bits (839), Expect = e-107
Identities = 173/449 (38%), Positives = 234/449 (52%), Gaps = 89/449 (19%)
Query: 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNAT 136
P+Q+ +++ P M +SW++ ++ V YG SGKY G ++
Sbjct: 43 HPDQVHISLVGPDKMRISWIT-------------QDSIPPSVVYGTVSGKYEGSANGTSS 89
Query: 137 VYSQLYPFKGLLNYTSGIIHHVKIDGLDPGTKYYYKCGDSKIPAMSAEHVFETLPLPSPT 196
Y LL Y SG I+ V I L P T YYYKCG P+ + E F T P+
Sbjct: 90 SY------HYLLIYRSGQINDVVIGPLKPNTVYYYKCGG---PSSTQEFSFRT----PPS 136
Query: 197 SYPHRIAVIGDLGLTSNSSTTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAF 256
+P + AV GDLG + + +T++H+ + D + ++ GDL+YAN
Sbjct: 137 KFPIKFAVSGDLGTSEWTKSTLEHVSKWDYDVFILPGDLSYAN----------------- 179
Query: 257 PDAPIRETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIE--PQVAGITFKSYLTRFAVPS 314
YQP WD +GR ++PL S+ P MV GNHE+E P + F +Y R+ +P
Sbjct: 180 -------FYQPLWDTFGRLVQPLASQRPWMVTHGNHELEKIPILHPEKFTAYNARWRMPF 232
Query: 315 EESGSNSNFYYSFNAGGVHFIMLGAYVDYNSTGAQYAWLKEDLHKLDRTVTPWLAAAWHP 374
EESGS SN YYSFN GVH IMLG+Y D+ QY WL+ +L K+DR TPW+ A H
Sbjct: 233 EESGSTSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHA 292
Query: 375 PWYNSYSSHYQEFEC--MRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDACGPVY 432
PWYNS +H E E M++ ME LLY+ VD+VF+GHVHAYER +RVY D CGPVY
Sbjct: 293 PWYNSNEAHQGEKESVGMKESMETLLYKARVDLVFAGHVHAYERFDRVYQGKTDKCGPVY 352
Query: 433 ITVGDGGNIEQVDVDHADDPGKCPSAGENLPEFGGVCHLNFTSGPAKGKFCWSKQPEWSA 492
IT+GDGGN E + + D +P+ S
Sbjct: 353 ITIGDGGNREGLATKYID-----------------------------------PKPDISL 377
Query: 493 YRESSFGHGILEVVNSTYALWTWHRNQDN 521
+RE+SFGHG L VV++ WTWHRN D+
Sbjct: 378 FREASFGHGQLNVVDANTMEWTWHRNDDD 406
|
Length = 427 |
| >gnl|CDD|163615 cd00839, MPP_PAPs, purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 316 bits (812), Expect = e-104
Identities = 130/354 (36%), Positives = 169/354 (47%), Gaps = 78/354 (22%)
Query: 198 YPHRIAVIGDLGL-TSNSSTTVDHLIQ--NDPSLILMVGDLTYANQYLTTGGKAASCYSC 254
P + AV GD+G T+NS+ T+DHL + + IL VGDL YA+ Y
Sbjct: 3 TPFKFAVFGDMGQNTNNSTNTLDHLEKELGNYDAILHVGDLAYADGYNN----------- 51
Query: 255 AFPDAPIRETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPS 314
RWD + R +EPL S VP MV GNHE + + K++ RF P
Sbjct: 52 -----------GSRWDTFMRQIEPLASYVPYMVTPGNHEADYNFSFYKIKAFFPRFRFPH 100
Query: 315 EESGSNSNFYYSFNAGGVHFIMLGAYVDYNSTGA---QYAWLKEDLHKLDRTVTPWLAAA 371
SGS SN +YSF+ G VHF+ L VD+ G QY WL+ DL K+DR+ TPW+
Sbjct: 101 SPSGSTSNLWYSFDVGPVHFVSLSTEVDFYGDGPGSPQYDWLEADLAKVDRSKTPWIIVM 160
Query: 372 WHPPWYNSYSSHYQ--EFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTL---- 425
H P Y S + H E E MR +E L Y+YGVD+V SGHVHAYER VYN T+
Sbjct: 161 GHRPMYCSNTDHDDCIEGEKMRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVVGDC 220
Query: 426 ----DACGPVYITVGDGGNIEQVDVDHADDPGKCPSAGENLPEFGGVCHLNFTSGPAKGK 481
+ GPV+I +G GGN E +D
Sbjct: 221 NPYSNPKGPVHIVIGAGGNDEGLD------------------------------------ 244
Query: 482 FCWSKQPEWSAYRESSFGHGILEVVNSTYALWTWHRNQDNYKEDSRGDHIYIVR 535
+ P WSA+RES +G G L V NST+ + W RN D D +I++
Sbjct: 245 PFSAPPPAWSAFRESDYGFGRLTVHNSTHLHFEWIRNDDG----VVIDSFWIIK 294
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 294 |
| >gnl|CDD|215750 pfam00149, Metallophos, Calcineurin-like phosphoesterase | Back alignment and domain information |
|---|
Score = 88.7 bits (219), Expect = 2e-20
Identities = 41/218 (18%), Positives = 64/218 (29%), Gaps = 37/218 (16%)
Query: 201 RIAVIGDLGLTSNSSTTVDHLIQ----NDPSLILMVGDLTYANQYLTTGGKAASCYSCAF 256
RI VIGDL + + L++ P L+L +GDL
Sbjct: 1 RILVIGDLHGGLDDLDLLLLLLELLGEPKPDLVLFLGDLVDRGPP--------------- 45
Query: 257 PDAPIRETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEE 316
F L + P+ ++ GNH+ + + + F
Sbjct: 46 ----------SLEVLALLFALKLKAPGPVYLVRGNHDFDSGNSELGFYLECAGLPYV--- 92
Query: 317 SGSNSNFYYSFNAGGVHFIMLGAYVDYNSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPPW 376
+ G V I L + +L+ L + H P
Sbjct: 93 -----LGNGDVSNGTVEIIGLSSLYGKGGGLVWEEFLELLDLLLLAALVDGKILLVHGPL 147
Query: 377 YNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAY 414
S S + + +E LL GVD+V GH H
Sbjct: 148 SPSLDSGDDIYLFGEEALEDLLKDNGVDLVLRGHTHVP 185
|
This family includes a diverse range of phosphoesterases, including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this superfamily centre around the metal chelating residues. Length = 185 |
| >gnl|CDD|206178 pfam14008, Metallophos_C, Iron/zinc purple acid phosphatase-like protein C | Back alignment and domain information |
|---|
Score = 66.0 bits (162), Expect = 8e-14
Identities = 26/98 (26%), Positives = 34/98 (34%), Gaps = 38/98 (38%)
Query: 429 GPVYITVGDGGNIEQVDVDHADDPGKCPSAGENLPEFGGVCHLNFTSGPAKGKFCWSKQP 488
PV+I VG GN F QP
Sbjct: 2 APVHIVVGAAGNGL-------------------------------------DPF-PDPQP 23
Query: 489 EWSAYRESSFGHGILEVVNSTYALWTWHRNQDNYKEDS 526
WSA+R+S +G+G L V N T+ W + R+ D DS
Sbjct: 24 PWSAFRDSDYGYGRLTVHNRTHLYWEFVRSDDGTVLDS 61
|
This domain is found at the C-terminus of Purple acid phosphatase proteins. Length = 62 |
| >gnl|CDD|163614 cd00838, MPP_superfamily, metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 52.3 bits (125), Expect = 3e-08
Identities = 29/109 (26%), Positives = 39/109 (35%), Gaps = 15/109 (13%)
Query: 335 IMLGAYVDYNSTGAQYAWLKEDLHKLDRTVTPWLAAA-------WHPPWYNSYSSHYQEF 387
++LG V L L L P H P Y+ +
Sbjct: 31 LVLGDLVGDG--PDPEEVLAAALALLLLLGIPVYVVPGNHDILLTHGPPYDPLDELSPDE 88
Query: 388 ECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDACGPVYITVG 436
+ + + LL +YGVD+V SGH H YER D G +YI G
Sbjct: 89 DPGSEALLELLEKYGVDLVLSGHTHVYER------REPDGGGTLYINPG 131
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 131 |
| >gnl|CDD|163621 cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 51.5 bits (124), Expect = 3e-07
Identities = 63/308 (20%), Positives = 98/308 (31%), Gaps = 75/308 (24%)
Query: 200 HRIAVIGDLG-LTSNSSTTVDHLIQN-----DPSLILMVGDLTYANQYLTTGGKAASCYS 253
R +GD G + V + P IL +GD N Y
Sbjct: 1 LRFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGD----NFY------------ 44
Query: 254 CAFPDAPIRETYQPRW-DGWGRFMEPLTSRVPMMVIEGNHE----IEPQVAGITFKSYLT 308
D + PR+ + + +VP ++ GNH+ + Q+ T +
Sbjct: 45 ----DDGVGSVDDPRFETTFEDVYSAPSLQVPWYLVLGNHDYSGNVSAQID-YTKRPNSP 99
Query: 309 RFAVPSEESGSNSNFYYSFNAGG------VHFIML---------------GAYVDYNSTG 347
R+ +P +YY + V FIM+ +
Sbjct: 100 RWTMP--------AYYYRVSFPFPSSDTTVEFIMIDTVPLCGNSDDIASPYGPPNGKLAE 151
Query: 348 AQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVF 407
Q AWL++ L + W H P Y S H C+ + LL +Y VD
Sbjct: 152 EQLAWLEK---TLAASTADWKIVVGHHPIY-SSGEHG-PTSCLVDRLLPLLKKYKVDAYL 206
Query: 408 SGHVHAYERMNRVYNYTLDACGPVYITVGDGGNIEQVDVDHADDPGKCPSAGENLPEFGG 467
SGH H + + D G ++ G G+ + V H D +G GG
Sbjct: 207 SGHDHNLQHI------KDDGSGTSFVVSG-AGSKARPSVKHIDK-VPQFFSGFTSSG-GG 257
Query: 468 VCHLNFTS 475
+L T
Sbjct: 258 FAYLELTK 265
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 277 |
| >gnl|CDD|163638 cd07395, MPP_CSTP1, Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 48.8 bits (117), Expect = 3e-06
Identities = 45/211 (21%), Positives = 72/211 (34%), Gaps = 68/211 (32%)
Query: 226 PSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRFMEPLTSRVPM 285
P +++ GDL A P +RE + + L +P+
Sbjct: 50 PKFVVVCGDLVNA-----------------MPGDELRE---RQVSDLKDVLSLLDPDIPL 89
Query: 286 MVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSNF---YYSFNAGGVHFIMLGAYVD 342
+ + GNH++ + K Y F Y+SF GGV FI+L + +
Sbjct: 90 VCVCGNHDVGNTPTEESIKDY-------------RDVFGDDYFSFWVGGVFFIVLNSQLF 136
Query: 343 YNSTG------AQYAWLKEDL-----HKLDRTVTPWLAAAWHPPWY-------NSY---S 381
++ + AQ WL+E L + H PW+ +SY
Sbjct: 137 FDPSEVPELAQAQDVWLEEQLEIAKESDCKHVIV-----FQHIPWFLEDPDEEDSYFNIP 191
Query: 382 SHYQEFECMRQEMEALLYQYGVDIVFSGHVH 412
R+ + + GV VFSGH H
Sbjct: 192 KSV------RKPLLDKFKKAGVKAVFSGHYH 216
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 262 |
| >gnl|CDD|224327 COG1409, Icc, Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Score = 45.0 bits (106), Expect = 6e-05
Identities = 47/237 (19%), Positives = 75/237 (31%), Gaps = 48/237 (20%)
Query: 201 RIAVIGDLGLTSNSSTT-------VDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYS 253
RIA I DL L + + + + Q P L+++ GDLT +
Sbjct: 2 RIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTNDGE------------- 48
Query: 254 CAFPDAPIRETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVP 313
R + + L P++V+ GNH+ + R+AV
Sbjct: 49 ----PEEYRRLKE--------LLARLELPAPVIVVPGNHDARVVNGEAFSDQFFNRYAVL 96
Query: 314 SEESGSNSNFYYSFNAGGVHFIMLGAYVDYNSTG----AQYAWLKEDLHKLDRTVTPWLA 369
S GG I L + V G Q WL+E L +
Sbjct: 97 VGACSS----------GGWRVIGLDSSVPGVPLGRLGAEQLDWLEEALAAAPERAKDTVV 146
Query: 370 AAWHPPWYNSYSSHYQEFECMRQEM--EALLYQYGVDIVFSGHVHAYERMNRVYNYT 424
H P + + + E+ + + V +V SGH+H + N T
Sbjct: 147 VLHHHPLPSPGTGVDRVALRDAGELLDVLIAHGNDVRLVLSGHIHLAAQTVYQLNGT 203
|
Length = 301 |
| >gnl|CDD|163645 cd07402, MPP_GpdQ, Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 39.1 bits (92), Expect = 0.003
Identities = 41/212 (19%), Positives = 69/212 (32%), Gaps = 65/212 (30%)
Query: 217 TVDHLIQNDPS--LILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGR 274
+ H+ P L+L+ GDLT D E+Y+ R
Sbjct: 30 VLAHINALHPRPDLVLVTGDLT---------------------DDGSPESYE-------R 61
Query: 275 F---MEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSNFYYSFNAGG 331
+ L +P+ ++ GNH+ + ++ E + Y + GG
Sbjct: 62 LRELLAAL--PIPVYLLPGNHD-DRAA----MRAVF------PELPPAPGFVQYVVDLGG 108
Query: 332 VHFIML---------GAYVDYNSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSS 382
I+L G AQ WL+ L + P L HPP + +
Sbjct: 109 WRLILLDSSVPGQHGGELCA-----AQLDWLEAALA--EAPDKPTLVFLHHPP-FPVGIA 160
Query: 383 HYQEFECM-RQEMEALLYQY-GVDIVFSGHVH 412
+ + A+L ++ V + GHVH
Sbjct: 161 WMDAIGLRNAEALAAVLARHPNVRAILCGHVH 192
|
GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 240 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 580 | |||
| KOG1378 | 452 | consensus Purple acid phosphatase [Carbohydrate tr | 100.0 | |
| PLN02533 | 427 | probable purple acid phosphatase | 100.0 | |
| cd00839 | 294 | MPP_PAPs purple acid phosphatases of the metalloph | 100.0 | |
| PTZ00422 | 394 | glideosome-associated protein 50; Provisional | 100.0 | |
| cd07378 | 277 | MPP_ACP5 Homo sapiens acid phosphatase 5 and relat | 99.97 | |
| cd07395 | 262 | MPP_CSTP1 Homo sapiens CSTP1 and related proteins, | 99.95 | |
| PF09423 | 453 | PhoD: PhoD-like phosphatase; InterPro: IPR018946 T | 99.94 | |
| cd07402 | 240 | MPP_GpdQ Enterobacter aerogenes GpdQ and related p | 99.91 | |
| COG3540 | 522 | PhoD Phosphodiesterase/alkaline phosphatase D [Ino | 99.9 | |
| KOG2679 | 336 | consensus Purple (tartrate-resistant) acid phospha | 99.9 | |
| cd07396 | 267 | MPP_Nbla03831 Homo sapiens Nbla03831 and related p | 99.9 | |
| PRK11148 | 275 | cyclic 3',5'-adenosine monophosphate phosphodieste | 99.87 | |
| cd07401 | 256 | MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metal | 99.86 | |
| cd07399 | 214 | MPP_YvnB Bacillus subtilis YvnB and related protei | 99.8 | |
| cd00842 | 296 | MPP_ASMase acid sphingomyelinase and related prote | 99.77 | |
| PF00149 | 200 | Metallophos: Calcineurin-like phosphoesterase; Int | 99.71 | |
| cd08163 | 257 | MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related | 99.69 | |
| cd07393 | 232 | MPP_DR1119 Deinococcus radiodurans DR1119 and rela | 99.65 | |
| cd07383 | 199 | MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase | 99.64 | |
| cd07392 | 188 | MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and rel | 99.61 | |
| TIGR03729 | 239 | acc_ester putative phosphoesterase. Members of thi | 99.6 | |
| TIGR03767 | 496 | P_acnes_RR metallophosphoesterase, PPA1498 family. | 99.6 | |
| COG1409 | 301 | Icc Predicted phosphohydrolases [General function | 99.52 | |
| PF14008 | 62 | Metallophos_C: Iron/zinc purple acid phosphatase-l | 99.5 | |
| cd07400 | 144 | MPP_YydB Bacillus subtilis YydB and related protei | 99.5 | |
| cd07385 | 223 | MPP_YkuE_C Bacillus subtilis YkuE and related prot | 99.47 | |
| cd07404 | 166 | MPP_MS158 Microscilla MS158 and related proteins, | 99.46 | |
| cd07388 | 224 | MPP_Tt1561 Thermus thermophilus Tt1561 and related | 99.43 | |
| cd00840 | 223 | MPP_Mre11_N Mre11 nuclease, N-terminal metallophos | 99.42 | |
| TIGR03768 | 492 | RPA4764 metallophosphoesterase, RPA4764 family. Th | 99.41 | |
| KOG1432 | 379 | consensus Predicted DNA repair exonuclease SIA1 [G | 99.4 | |
| PRK11340 | 271 | phosphodiesterase YaeI; Provisional | 99.4 | |
| cd00838 | 131 | MPP_superfamily metallophosphatase superfamily, me | 99.27 | |
| cd07389 | 228 | MPP_PhoD Bacillus subtilis PhoD and related protei | 99.21 | |
| PF12850 | 156 | Metallophos_2: Calcineurin-like phosphoesterase su | 99.17 | |
| cd07397 | 238 | MPP_DevT Myxococcus xanthus DevT and related prote | 99.13 | |
| cd07379 | 135 | MPP_239FB Homo sapiens 239FB and related proteins, | 99.11 | |
| COG1408 | 284 | Predicted phosphohydrolases [General function pred | 99.1 | |
| PRK05340 | 241 | UDP-2,3-diacylglucosamine hydrolase; Provisional | 99.02 | |
| cd08166 | 195 | MPP_Cdc1_like_1 uncharacterized subgroup related t | 98.93 | |
| cd00841 | 155 | MPP_YfcE Escherichia coli YfcE and related protein | 98.92 | |
| cd07384 | 171 | MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and re | 98.91 | |
| cd08165 | 156 | MPP_MPPE1 human MPPE1 and related proteins, metall | 98.88 | |
| TIGR00040 | 158 | yfcE phosphoesterase, MJ0936 family. Members of th | 98.85 | |
| cd07394 | 178 | MPP_Vps29 Homo sapiens Vps29 and related proteins, | 98.82 | |
| PF14582 | 255 | Metallophos_3: Metallophosphoesterase, calcineurin | 98.8 | |
| KOG3770 | 577 | consensus Acid sphingomyelinase and PHM5 phosphate | 98.78 | |
| COG2129 | 226 | Predicted phosphoesterases, related to the Icc pro | 98.78 | |
| TIGR01854 | 231 | lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. | 98.76 | |
| cd07403 | 129 | MPP_TTHA0053 Thermus thermophilus TTHA0053 and rel | 98.75 | |
| COG1768 | 230 | Predicted phosphohydrolase [General function predi | 98.71 | |
| cd00845 | 252 | MPP_UshA_N_like Escherichia coli UshA-like family, | 98.63 | |
| cd08164 | 193 | MPP_Ted1 Saccharomyces cerevisiae Ted1 and related | 98.6 | |
| cd07398 | 217 | MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and relat | 98.59 | |
| PRK09453 | 182 | phosphodiesterase; Provisional | 98.56 | |
| cd07410 | 277 | MPP_CpdB_N Escherichia coli CpdB and related prote | 98.53 | |
| cd07406 | 257 | MPP_CG11883_N Drosophila melanogaster CG11883 and | 98.52 | |
| TIGR00583 | 405 | mre11 DNA repair protein (mre11). All proteins in | 98.5 | |
| COG0420 | 390 | SbcD DNA repair exonuclease [DNA replication, reco | 98.41 | |
| COG0622 | 172 | Predicted phosphoesterase [General function predic | 98.38 | |
| cd00844 | 262 | MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-t | 98.35 | |
| cd07411 | 264 | MPP_SoxB_N Thermus thermophilus SoxB and related p | 98.3 | |
| cd07412 | 288 | MPP_YhcR_N Bacillus subtilis YhcR endonuclease and | 98.24 | |
| cd07408 | 257 | MPP_SA0022_N Staphylococcus aureus SA0022 and rela | 98.23 | |
| cd07382 | 255 | MPP_DR1281 Deinococcus radiodurans DR1281 and rela | 98.22 | |
| cd07409 | 281 | MPP_CD73_N CD73 ecto-5'-nucleotidase and related p | 98.14 | |
| PRK04036 | 504 | DNA polymerase II small subunit; Validated | 98.12 | |
| cd07407 | 282 | MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and | 98.11 | |
| COG2908 | 237 | Uncharacterized protein conserved in bacteria [Fun | 98.1 | |
| TIGR00282 | 266 | metallophosphoesterase, MG_246/BB_0505 family. A m | 98.1 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 98.07 | |
| KOG3662 | 410 | consensus Cell division control protein/predicted | 98.06 | |
| TIGR00619 | 253 | sbcd exonuclease SbcD. This family is based on the | 97.98 | |
| cd07386 | 243 | MPP_DNA_pol_II_small_archeal_C archeal DNA polymer | 97.95 | |
| cd07405 | 285 | MPP_UshA_N Escherichia coli UshA and related prote | 97.86 | |
| cd07424 | 207 | MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase do | 97.85 | |
| PHA02546 | 340 | 47 endonuclease subunit; Provisional | 97.82 | |
| PRK10966 | 407 | exonuclease subunit SbcD; Provisional | 97.81 | |
| cd07390 | 168 | MPP_AQ1575 Aquifex aeolicus AQ1575 and related pro | 97.78 | |
| COG0737 | 517 | UshA 5'-nucleotidase/2',3'-cyclic phosphodiesteras | 97.67 | |
| cd07425 | 208 | MPP_Shelphs Shewanella-like phosphatases, metallop | 97.67 | |
| PRK09968 | 218 | serine/threonine-specific protein phosphatase 2; P | 97.62 | |
| TIGR01530 | 550 | nadN NAD pyrophosphatase/5'-nucleotidase NadN. Thi | 97.61 | |
| PRK09558 | 551 | ushA bifunctional UDP-sugar hydrolase/5'-nucleotid | 97.6 | |
| PRK11439 | 218 | pphA serine/threonine protein phosphatase 1; Provi | 97.58 | |
| cd08162 | 313 | MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA | 97.46 | |
| cd07391 | 172 | MPP_PF1019 Pyrococcus furiosus PF1019 and related | 97.39 | |
| cd07380 | 150 | MPP_CWF19_N Schizosaccharomyces pombe CWF19 and re | 97.31 | |
| KOG2863 | 456 | consensus RNA lariat debranching enzyme [RNA proce | 97.3 | |
| PRK11907 | 814 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.19 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.12 | |
| PRK09418 | 780 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.0 | |
| PHA02239 | 235 | putative protein phosphatase | 96.99 | |
| COG4186 | 186 | Predicted phosphoesterase or phosphohydrolase [Gen | 96.83 | |
| PRK00166 | 275 | apaH diadenosine tetraphosphatase; Reviewed | 96.76 | |
| TIGR00024 | 225 | SbcD_rel_arch putative phosphoesterase, SbcD/Mre11 | 96.75 | |
| PRK09420 | 649 | cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosp | 96.52 | |
| TIGR01390 | 626 | CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphod | 96.5 | |
| cd07423 | 234 | MPP_PrpE Bacillus subtilis PrpE and related protei | 96.45 | |
| COG5555 | 392 | Cytolysin, a secreted calcineurin-like phosphatase | 96.37 | |
| cd07387 | 257 | MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2 | 96.33 | |
| PRK13625 | 245 | bis(5'-nucleosyl)-tetraphosphatase PrpE; Provision | 96.32 | |
| COG1311 | 481 | HYS2 Archaeal DNA polymerase II, small subunit/DNA | 96.07 | |
| PF00041 | 85 | fn3: Fibronectin type III domain; InterPro: IPR003 | 96.06 | |
| cd07381 | 239 | MPP_CapA CapA and related proteins, metallophospha | 95.83 | |
| cd07413 | 222 | MPP_PA3087 Pseudomonas aeruginosa PA3087 and relat | 95.81 | |
| PF13277 | 253 | YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C. | 95.55 | |
| cd07422 | 257 | MPP_ApaH Escherichia coli ApaH and related protein | 95.48 | |
| cd00144 | 225 | MPP_PPP_family phosphoprotein phosphatases of the | 95.47 | |
| cd07421 | 304 | MPP_Rhilphs Rhilph phosphatases, metallophosphatas | 95.31 | |
| COG1692 | 266 | Calcineurin-like phosphoesterase [General function | 95.24 | |
| smart00854 | 239 | PGA_cap Bacterial capsule synthesis protein PGA_ca | 95.17 | |
| TIGR00668 | 279 | apaH bis(5'-nucleosyl)-tetraphosphatase (symmetric | 95.14 | |
| COG1407 | 235 | Predicted ICC-like phosphoesterases [General funct | 94.93 | |
| KOG2310 | 646 | consensus DNA repair exonuclease MRE11 [Replicatio | 94.18 | |
| PF09587 | 250 | PGA_cap: Bacterial capsule synthesis protein PGA_c | 93.29 | |
| cd07416 | 305 | MPP_PP2B PP2B, metallophosphatase domain. PP2B (ca | 91.94 | |
| cd07420 | 321 | MPP_RdgC Drosophila melanogaster RdgC and related | 91.41 | |
| smart00156 | 271 | PP2Ac Protein phosphatase 2A homologues, catalytic | 91.01 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 90.98 | |
| KOG4419 | 602 | consensus 5' nucleotidase [Nucleotide transport an | 90.79 | |
| cd07415 | 285 | MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein | 90.1 | |
| cd07414 | 293 | MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzyme | 89.6 | |
| PTZ00239 | 303 | serine/threonine protein phosphatase 2A; Provision | 89.24 | |
| KOG4221 | 1381 | consensus Receptor mediating netrin-dependent axon | 89.04 | |
| PTZ00480 | 320 | serine/threonine-protein phosphatase; Provisional | 88.19 | |
| cd07418 | 377 | MPP_PP7 PP7, metallophosphatase domain. PP7 is a p | 88.17 | |
| cd00063 | 93 | FN3 Fibronectin type 3 domain; One of three types | 88.04 | |
| PTZ00244 | 294 | serine/threonine-protein phosphatase PP1; Provisio | 87.22 | |
| KOG3325 | 183 | consensus Membrane coat complex Retromer, subunit | 86.88 | |
| cd07419 | 311 | MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase a | 83.7 | |
| cd07417 | 316 | MPP_PP5_C PP5, C-terminal metallophosphatase domai | 82.79 | |
| PF04042 | 209 | DNA_pol_E_B: DNA polymerase alpha/epsilon subunit | 81.98 | |
| smart00060 | 83 | FN3 Fibronectin type 3 domain. One of three types | 80.06 |
| >KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-83 Score=669.78 Aligned_cols=421 Identities=38% Similarity=0.621 Sum_probs=365.1
Q ss_pred CCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCcccccCCCCCCCceEEEEeCC-CCcEEEEEEeCCCCCCCCCCCCCCC
Q 008029 34 QRIPTTLQGPFEPVTRRFDPSLRRGSDDLPMNHTRLKKNVTSNFPEQIALAISS-PTSMWVSWVSGDAQIGSNVTPLDPS 112 (580)
Q Consensus 34 ~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~p~~~~~~~~~~P~qi~la~~~-~~sm~V~W~T~~~~~g~~~~~~~p~ 112 (580)
...+..+.|+.-+..+++++++.-....++...|.+. +.||||||++++ .++|+|+|.|.+..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~peQvhlS~~~~~~~m~VswvT~~~~----------- 69 (452)
T KOG1378|consen 6 WSQSEINPKHTLHDINPLPGTLHLLSESEQLTFPSVV-----NSPEQVHLSFTDNLNEMRVSWVTGDGE----------- 69 (452)
T ss_pred eeeeeccCCCccccccccCcccccccccccccCcccC-----CCCCeEEEeccCCCCcEEEEEeCCCCC-----------
Confidence 3457778899999999999999888888888777655 459999999999 77999999998753
Q ss_pred CCCcEEEEcccCCCcceE-EeeEEEEEeeecccCCccccccccEEEEEeCCCCCCCEEEEEEEeCCCCCccceEEEEcCC
Q 008029 113 TVASDVWYGKQSGKYTSK-RGGNATVYSQLYPFKGLLNYTSGIIHHVKIDGLDPGTKYYYKCGDSKIPAMSAEHVFETLP 191 (580)
Q Consensus 113 ~~~~~V~yg~~~~~~~~~-a~g~~~~y~~~~p~~g~~~~~~~~~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~~~F~T~p 191 (580)
.++|+||+.++..... ++|.+..+.+.|.. .+|++|++|+|+|++|+|+|+||||||++. .||++|+|+|+|
T Consensus 70 --~~~V~Yg~~~~~~~~~~~~~~~~~~~~~y~~---~~~~sg~ih~~~~~~L~~~t~YyY~~Gs~~--~wS~~f~F~t~p 142 (452)
T KOG1378|consen 70 --ENVVRYGEVKDKLDNSAARGMTEAWTDGYAN---GWRDSGYIHDAVMKNLEPNTRYYYQVGSDL--KWSEIFSFKTPP 142 (452)
T ss_pred --CceEEEeecCCCccccccccceEEEeccccc---ccceeeeEeeeeecCCCCCceEEEEeCCCC--CcccceEeECCC
Confidence 3789999887664433 36666666554433 247899999999999999999999999987 699999999998
Q ss_pred CCCCCCCCeEEEEEcccCCCCChHHHHHHHHHCC-CCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHH
Q 008029 192 LPSPTSYPHRIAVIGDLGLTSNSSTTVDHLIQND-PSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWD 270 (580)
Q Consensus 192 ~~~~~~~~~rfav~gD~g~~~~~~~~l~~i~~~~-pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd 270 (580)
+ + ..+.+++++||||.+.....++....++. +|+|||+||++|++.+.+ .+||
T Consensus 143 -~-~-~~~~~~~i~GDlG~~~~~~s~~~~~~~~~k~d~vlhiGDlsYa~~~~n-----------------------~~wD 196 (452)
T KOG1378|consen 143 -G-Q-DSPTRAAIFGDMGCTEPYTSTLRNQEENLKPDAVLHIGDLSYAMGYSN-----------------------WQWD 196 (452)
T ss_pred -C-c-cCceeEEEEccccccccccchHhHHhcccCCcEEEEecchhhcCCCCc-----------------------cchH
Confidence 2 2 25899999999999987777777776665 999999999999975410 4899
Q ss_pred HHHHhhhhhccCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCCCCCCCcceEEEEeCcEEEEEEcCcccC--CCcHH
Q 008029 271 GWGRFMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYVDY--NSTGA 348 (580)
Q Consensus 271 ~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsfd~G~v~fI~Ldt~~~~--~~~~~ 348 (580)
.|++++|++++.+|+|++.||||+...... .|..|..||.||.+++.+..++||||++|++|||+|+|+.++ ....+
T Consensus 197 ~f~r~vEp~As~vPymv~~GNHE~d~~~~~-~F~~y~~Rf~mP~~~s~s~~~l~YSfd~G~vhfv~lsse~~~~~~~~~~ 275 (452)
T KOG1378|consen 197 EFGRQVEPIASYVPYMVCSGNHEIDWPPQP-CFVPYSARFNMPGNSSESDSNLYYSFDVGGVHFVVLSTETYYNFLKGTA 275 (452)
T ss_pred HHHhhhhhhhccCceEEecccccccCCCcc-cccccceeeccCCCcCCCCCceeEEEeeccEEEEEEeccccccccccch
Confidence 999999999999999999999999866544 799999999999998888888999999999999999999885 35799
Q ss_pred HHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCC-CcchhH--HHHHHHHHHHHhcCCcEEEEccccCceeEeecccccc
Q 008029 349 QYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSS-HYQEFE--CMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTL 425 (580)
Q Consensus 349 Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~-~~~~~~--~~r~~l~~Ll~ky~VdlvlsGH~H~yeR~~pv~n~~~ 425 (580)
|++||+++|++++|+++||+||+.|+|||++... ++++.+ .+|..||+||.+|+||++|+||+|+|||++|++|.++
T Consensus 276 QY~WL~~dL~~v~r~~tPWlIv~~HrP~Y~S~~~~~~reG~~~~~~~~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~ 355 (452)
T KOG1378|consen 276 QYQWLERDLASVDRKKTPWLIVQGHRPMYCSSNDAHYREGEFESMREGLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTC 355 (452)
T ss_pred HHHHHHHHHHHhcccCCCeEEEEecccceecCCchhhccCcchhhHHHHHHHHHHhceeEEEeccceehhccchhhccee
Confidence 9999999999999887999999999999999865 666665 8899999999999999999999999999999999887
Q ss_pred ----------CCCCcEEEEeCCCCccccccCCCCCCCCCCCCCCCCCCcccceeecccccCCCCCCcCCCCCCCcceeee
Q 008029 426 ----------DACGPVYITVGDGGNIEQVDVDHADDPGKCPSAGENLPEFGGVCHLNFTSGPAKGKFCWSKQPEWSAYRE 495 (580)
Q Consensus 426 ----------~~~G~vyIv~G~gG~~e~~~~~~~~~~~~~p~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~p~~sa~~~ 495 (580)
+++||+||++|+|||+|+++... .+||+|||||+
T Consensus 356 ~~~~~~~~~~d~~aPvyI~~G~~G~~e~~~~~~------------------------------------~~~p~~Sa~R~ 399 (452)
T KOG1378|consen 356 GTGWGPVHLVDGMAPIYITVGDGGNHEHLDPFS------------------------------------SPQPEWSAFRE 399 (452)
T ss_pred eccCCcccccCCCCCEEEEEccCCcccccCccc------------------------------------CCCCccccccc
Confidence 89999999999999999876421 26899999999
Q ss_pred cCccEEEEEEEcCcceEEEEEEccCCCCCCccceEEEEEeCCCCCCC
Q 008029 496 SSFGHGILEVVNSTYALWTWHRNQDNYKEDSRGDHIYIVRQPELCFD 542 (580)
Q Consensus 496 ~~~G~~~l~v~n~t~~~~~~~~~~~~~~~~~v~d~~~i~k~~~~~~~ 542 (580)
.+|||++|+++|.||++|+|+|++|..+ ++.|+|||+|+...|..
T Consensus 400 ~dfG~~~L~v~N~TH~~~~~~~~~d~~g--~~~D~fwl~k~~~~~~~ 444 (452)
T KOG1378|consen 400 GDFGYTRLTAKNGTHAHVHWVRNSDASG--VVIDSFWLIKDYRDMVV 444 (452)
T ss_pred ccCCeEEEEEecCceEEEEEEeccCCCc--eEeeeEEEEcccCcccc
Confidence 9999999999999999999999988744 59999999999776433
|
|
| >PLN02533 probable purple acid phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-78 Score=651.29 Aligned_cols=379 Identities=45% Similarity=0.849 Sum_probs=330.5
Q ss_pred CCCCCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCcccccc
Q 008029 73 VTSNFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTS 152 (580)
Q Consensus 73 ~~~~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~ 152 (580)
.....|+|||||++++++|+|+|.|.+. ..+.|+||++++.+..++.|++.+|+.. ..|.+
T Consensus 39 ~~~~~P~qvhls~~~~~~m~V~W~T~~~-------------~~~~V~yG~~~~~l~~~a~g~~~~~~~~------~~~~~ 99 (427)
T PLN02533 39 DDPTHPDQVHISLVGPDKMRISWITQDS-------------IPPSVVYGTVSGKYEGSANGTSSSYHYL------LIYRS 99 (427)
T ss_pred CCCCCCceEEEEEcCCCeEEEEEECCCC-------------CCCEEEEecCCCCCcceEEEEEEEEecc------ccccC
Confidence 3456899999999999999999999863 3578999999999999999998888631 24678
Q ss_pred ccEEEEEeCCCCCCCEEEEEEEeCCCCCccceEEEEcCCCCCCCCCCeEEEEEcccCCCCChHHHHHHHHHCCCCEEEEc
Q 008029 153 GIIHHVKIDGLDPGTKYYYKCGDSKIPAMSAEHVFETLPLPSPTSYPHRIAVIGDLGLTSNSSTTVDHLIQNDPSLILMV 232 (580)
Q Consensus 153 ~~~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~~~F~T~p~~~~~~~~~rfav~gD~g~~~~~~~~l~~i~~~~pDfvl~~ 232 (580)
+++|+|+|+||+|+|+||||||.. .+|++++|+|+|.. .++||+++||+|.......+++++.+.+|||||++
T Consensus 100 g~iH~v~l~~L~p~T~Y~Yrvg~~---~~s~~~~F~T~p~~----~~~~f~v~GDlG~~~~~~~tl~~i~~~~pD~vl~~ 172 (427)
T PLN02533 100 GQINDVVIGPLKPNTVYYYKCGGP---SSTQEFSFRTPPSK----FPIKFAVSGDLGTSEWTKSTLEHVSKWDYDVFILP 172 (427)
T ss_pred CeEEEEEeCCCCCCCEEEEEECCC---CCccceEEECCCCC----CCeEEEEEEeCCCCcccHHHHHHHHhcCCCEEEEc
Confidence 999999999999999999999964 36899999998853 37999999999987666678899988999999999
Q ss_pred ccccccccccccCCCCCcccccCCCCCccccccHHHHHHHHHhhhhhccCCCeEEecCCCCCCCCc--ccccHHHHHhhc
Q 008029 233 GDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIEPQV--AGITFKSYLTRF 310 (580)
Q Consensus 233 GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~--~~~~f~~y~~~f 310 (580)
||++|++. |+.+|+.|.+.++++.+.+|+|+++||||..... ....|..|..+|
T Consensus 173 GDl~y~~~------------------------~~~~wd~f~~~i~~l~s~~P~m~~~GNHE~~~~~~~~~~~f~~y~~rf 228 (427)
T PLN02533 173 GDLSYANF------------------------YQPLWDTFGRLVQPLASQRPWMVTHGNHELEKIPILHPEKFTAYNARW 228 (427)
T ss_pred Cccccccc------------------------hHHHHHHHHHHhhhHhhcCceEEeCccccccccccccCcCccchhhcc
Confidence 99999742 3678999999999999999999999999986432 235678899999
Q ss_pred CCCCCCCCCCCcceEEEEeCcEEEEEEcCcccCCCcHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcch--hH
Q 008029 311 AVPSEESGSNSNFYYSFNAGGVHFIMLGAYVDYNSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQE--FE 388 (580)
Q Consensus 311 ~~P~~~~~~~~~~yYsfd~G~v~fI~Ldt~~~~~~~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~--~~ 388 (580)
.||.++.++..+.||||++|++|||+||++.++....+|++||+++|++++|+++||+|+++|+|+|++...+..+ ..
T Consensus 229 ~mP~~~~g~~~~~yYSfd~g~vhfI~Lds~~~~~~~~~Q~~WLe~dL~~~~r~~~pwiIv~~H~P~y~s~~~~~~~~~~~ 308 (427)
T PLN02533 229 RMPFEESGSTSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGEKESV 308 (427)
T ss_pred cCCccccCCCCCceEEEEECCEEEEEEeCCccccCchHHHHHHHHHHHhhcccCCCEEEEEeCCCeeecccccCCcchhH
Confidence 9998877777899999999999999999999888889999999999999988889999999999999876443222 24
Q ss_pred HHHHHHHHHHHhcCCcEEEEccccCceeEeeccccccCCCCcEEEEeCCCCccccccCCCCCCCCCCCCCCCCCCcccce
Q 008029 389 CMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDACGPVYITVGDGGNIEQVDVDHADDPGKCPSAGENLPEFGGV 468 (580)
Q Consensus 389 ~~r~~l~~Ll~ky~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyIv~G~gG~~e~~~~~~~~~~~~~p~~~~~~~~~gg~ 468 (580)
.+|+.|++||++|+||++|+||+|.|||++|++|++++++|++||++|+||+.|++...+
T Consensus 309 ~~r~~le~Ll~~~~VdlvlsGH~H~YeR~~p~~~~~~~~~gpvyiv~G~gG~~e~~~~~~-------------------- 368 (427)
T PLN02533 309 GMKESMETLLYKARVDLVFAGHVHAYERFDRVYQGKTDKCGPVYITIGDGGNREGLATKY-------------------- 368 (427)
T ss_pred HHHHHHHHHHHHhCCcEEEecceecccccccccCCccCCCCCEEEEeCCCcccccccccc--------------------
Confidence 578899999999999999999999999999999999999999999999999998764211
Q ss_pred eecccccCCCCCCcCCCCCCCcceeeecCccEEEEEEEcCcceEEEEEEccCCCCCCccceEEEEEeCCC
Q 008029 469 CHLNFTSGPAKGKFCWSKQPEWSAYRESSFGHGILEVVNSTYALWTWHRNQDNYKEDSRGDHIYIVRQPE 538 (580)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~p~~sa~~~~~~G~~~l~v~n~t~~~~~~~~~~~~~~~~~v~d~~~i~k~~~ 538 (580)
.+++|+||+||+.+|||++|+|+|+|||+|+|+|++|+.. .|.|+|||.|...
T Consensus 369 ---------------~~~~~~~s~~r~~~~G~~~l~v~n~t~l~~~~~~~~~~~~--~~~D~~~i~~~~~ 421 (427)
T PLN02533 369 ---------------IDPKPDISLFREASFGHGQLNVVDANTMEWTWHRNDDDQS--VASDSVWLKSLLT 421 (427)
T ss_pred ---------------CCCCCCceeEEeccCCEEEEEEEcCCeEEEEEEecCCCCc--eeeeEEEEEeccC
Confidence 1367999999999999999999999999999999988744 4899999999843
|
|
| >cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-46 Score=386.87 Aligned_cols=276 Identities=46% Similarity=0.787 Sum_probs=222.9
Q ss_pred CCeEEEEEcccCCC-CChHHHHHHHHH--CCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHHH
Q 008029 198 YPHRIAVIGDLGLT-SNSSTTVDHLIQ--NDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGR 274 (580)
Q Consensus 198 ~~~rfav~gD~g~~-~~~~~~l~~i~~--~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~~ 274 (580)
.++||+++||+|.. .....+++++.+ .+|||||++||++|+++.. .+.+|+.|.+
T Consensus 3 ~~~~f~v~gD~~~~~~~~~~~~~~l~~~~~~~d~vl~~GDl~~~~~~~----------------------~~~~~~~~~~ 60 (294)
T cd00839 3 TPFKFAVFGDMGQNTNNSTNTLDHLEKELGNYDAILHVGDLAYADGYN----------------------NGSRWDTFMR 60 (294)
T ss_pred CcEEEEEEEECCCCCCCcHHHHHHHHhccCCccEEEEcCchhhhcCCc----------------------cchhHHHHHH
Confidence 37999999999973 456788888887 6999999999999874320 1257999999
Q ss_pred hhhhhccCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCCCCCCCcceEEEEeCcEEEEEEcCcccC---CCcHHHHH
Q 008029 275 FMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYVDY---NSTGAQYA 351 (580)
Q Consensus 275 ~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsfd~G~v~fI~Ldt~~~~---~~~~~Q~~ 351 (580)
.++++.+.+|+++++||||............+..++.++........+.||+|++|++|||+||++... ....+|++
T Consensus 61 ~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~~~~q~~ 140 (294)
T cd00839 61 QIEPLASYVPYMVTPGNHEADYNFSFYKIKAFFPRFRFPHSPSGSTSNLWYSFDVGPVHFVSLSTEVDFYGDGPGSPQYD 140 (294)
T ss_pred HHHHHHhcCCcEEcCcccccccCCCCcccccccccccccCCCCCCCCCceEEEeeCCEEEEEEecccccccCCCCcHHHH
Confidence 999998999999999999997543322111111233344444444568899999999999999998765 56899999
Q ss_pred HHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcc--hhHHHHHHHHHHHHhcCCcEEEEccccCceeEeeccccc-----
Q 008029 352 WLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQ--EFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYT----- 424 (580)
Q Consensus 352 WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~--~~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR~~pv~n~~----- 424 (580)
||+++|+++++.+.+|+||++|+|+|+....... .....++.|++||++|+|+++|+||+|.|+|++|+++++
T Consensus 141 WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~ll~~~~v~~vl~GH~H~y~r~~p~~~~~~~~~~ 220 (294)
T cd00839 141 WLEADLAKVDRSKTPWIIVMGHRPMYCSNTDHDDCIEGEKMRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVVGDC 220 (294)
T ss_pred HHHHHHHHhcccCCCeEEEEeccCcEecCccccccchhHHHHHHHHHHHHHhCCCEEEEccceeeEeechhhCCEecccc
Confidence 9999999987667899999999999987644322 245678999999999999999999999999999998865
Q ss_pred ---cCCCCcEEEEeCCCCccccccCCCCCCCCCCCCCCCCCCcccceeecccccCCCCCCcCCCCCCCcceeeecCccEE
Q 008029 425 ---LDACGPVYITVGDGGNIEQVDVDHADDPGKCPSAGENLPEFGGVCHLNFTSGPAKGKFCWSKQPEWSAYRESSFGHG 501 (580)
Q Consensus 425 ---~~~~G~vyIv~G~gG~~e~~~~~~~~~~~~~p~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~p~~sa~~~~~~G~~ 501 (580)
.+++|++||++|+||+.+...... ...++|++++...+||+
T Consensus 221 ~~~~~~~g~~yiv~G~~G~~~~~~~~~------------------------------------~~~~~~~~~~~~~~g~~ 264 (294)
T cd00839 221 NPYSNPKGPVHIVIGAGGNDEGLDPFS------------------------------------APPPAWSAFRESDYGFG 264 (294)
T ss_pred ccccCCCccEEEEECCCccccCcCccc------------------------------------CCCCCceEEEeccCCEE
Confidence 368899999999999976542100 02368999999999999
Q ss_pred EEEEEcCcceEEEEEEccCCCCCCccceEEEEEe
Q 008029 502 ILEVVNSTYALWTWHRNQDNYKEDSRGDHIYIVR 535 (580)
Q Consensus 502 ~l~v~n~t~~~~~~~~~~~~~~~~~v~d~~~i~k 535 (580)
+|+|.|+|+|.|+|+++.+| +|.|+|+|+|
T Consensus 265 ~~~~~~~t~l~~~~~~~~~g----~v~D~f~i~k 294 (294)
T cd00839 265 RLTVHNSTHLHFEWIRNDDG----VVIDSFWIIK 294 (294)
T ss_pred EEEEEecCeEEEEEEECCCC----eEEEEEEEeC
Confidence 99999999999999999887 4999999986
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver |
| >PTZ00422 glideosome-associated protein 50; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=289.17 Aligned_cols=260 Identities=17% Similarity=0.267 Sum_probs=191.3
Q ss_pred CeEEEEEcccCCCCChHHHHHHHH-----HCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHH-H
Q 008029 199 PHRIAVIGDLGLTSNSSTTVDHLI-----QNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDG-W 272 (580)
Q Consensus 199 ~~rfav~gD~g~~~~~~~~l~~i~-----~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~-~ 272 (580)
.++|+++||+|.+...+..+++.+ +.++||||.+||+. .++. .+ ..+++|.. |
T Consensus 26 ~l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF-~~Gv-----~s---------------v~Dp~f~~~F 84 (394)
T PTZ00422 26 QLRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNF-PGGV-----DG---------------LNDPKWKHCF 84 (394)
T ss_pred eEEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccc-cCCC-----CC---------------ccchhHHhhH
Confidence 589999999998655555444332 35899999999998 4432 11 12356765 4
Q ss_pred HHhhhhhc--cCCCeEEecCCCCCCCCccccc--HH------------HH------HhhcCCCCCCCCCCCcceEEE---
Q 008029 273 GRFMEPLT--SRVPMMVIEGNHEIEPQVAGIT--FK------------SY------LTRFAVPSEESGSNSNFYYSF--- 327 (580)
Q Consensus 273 ~~~l~~l~--~~vP~~~v~GNHD~~~~~~~~~--f~------------~y------~~~f~~P~~~~~~~~~~yYsf--- 327 (580)
.+...... ..+||++++||||+.++...+. +. .| ..||.||. .||++
T Consensus 85 E~vY~~~s~~L~~Pwy~vLGNHDy~Gn~~AQi~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP~--------~yY~~~~~ 156 (394)
T PTZ00422 85 ENVYSEESGDMQIPFFTVLGQADWDGNYNAELLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMPN--------YWYHYFTH 156 (394)
T ss_pred hhhccCcchhhCCCeEEeCCcccccCCchhhhccccccccccccccccccccccccCCCccCCc--------hhheeeee
Confidence 44454443 5799999999999975543321 11 11 25788885 67754
Q ss_pred -Ee-------------CcEEEEEEcCccc-----C-CCcHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchh
Q 008029 328 -NA-------------GGVHFIMLGAYVD-----Y-NSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEF 387 (580)
Q Consensus 328 -d~-------------G~v~fI~Ldt~~~-----~-~~~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~ 387 (580)
.. ..+.||++||+.. + .....|++||+++|+.+ ++.++|+||++|||+|+++.. ...
T Consensus 157 f~~~~~~~~~~~~~~~~~v~fifiDT~~l~~~~~~~~~~~~~w~~L~~~L~~a-~k~a~WkIVvGHhPIySsG~h--g~~ 233 (394)
T PTZ00422 157 FTDTSGPSLLKSGHKDMSVAFIFIDTWILSSSFPYKKVSERAWQDLKATLEYA-PKIADYIIVVGDKPIYSSGSS--KGD 233 (394)
T ss_pred eecccccccccccCCCCEEEEEEEECchhcccCCccccCHHHHHHHHHHHHhh-ccCCCeEEEEecCceeecCCC--CCC
Confidence 21 2389999999632 1 22578999999999754 356789999999999998643 234
Q ss_pred HHHHHHHHHHHHhcCCcEEEEccccCceeEeeccccccCCCCcEEEEeCCCCccccccCCCCCCCCCCCCCCCCCCcccc
Q 008029 388 ECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDACGPVYITVGDGGNIEQVDVDHADDPGKCPSAGENLPEFGG 467 (580)
Q Consensus 388 ~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyIv~G~gG~~e~~~~~~~~~~~~~p~~~~~~~~~gg 467 (580)
.+++..|+|||++|+||++|+||+|.+||.. ++|+.||++|+||...+...
T Consensus 234 ~~L~~~L~PLL~ky~VdlYisGHDH~lq~i~--------~~gt~yIvSGaGs~~~~~~~--------------------- 284 (394)
T PTZ00422 234 SYLSYYLLPLLKDAQVDLYISGYDRNMEVLT--------DEGTAHINCGSGGNSGRKSI--------------------- 284 (394)
T ss_pred HHHHHHHHHHHHHcCcCEEEEccccceEEec--------CCCceEEEeCccccccCCCC---------------------
Confidence 5789999999999999999999999999974 46899999999998543211
Q ss_pred eeecccccCCCCCCcCCCCCCCcceeeecCccEEEEEEEcCcceEEEEEEccCCCCCCccceEEEEEeCCCCCCC
Q 008029 468 VCHLNFTSGPAKGKFCWSKQPEWSAYRESSFGHGILEVVNSTYALWTWHRNQDNYKEDSRGDHIYIVRQPELCFD 542 (580)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~p~~sa~~~~~~G~~~l~v~n~t~~~~~~~~~~~~~~~~~v~d~~~i~k~~~~~~~ 542 (580)
..++|+.|.....||..+++ +.+.+..+|+.+.+| ++++++.+.|.+.+-+.
T Consensus 285 ------------------~~~~~s~F~~~~~GF~~~~l-~~~~l~~~fid~~~G----kvL~~~~~~~~~~~~~~ 336 (394)
T PTZ00422 285 ------------------MKNSKSLFYSEDIGFCIHEL-NAEGMVTKFVSGNTG----EVLYTHKQPLKKRKLRF 336 (394)
T ss_pred ------------------CCCCCcceecCCCCEEEEEE-ecCEEEEEEEeCCCC----cEEEEeeecccchhhhh
Confidence 23567889888999999997 889999999976566 48999888777554433
|
|
| >cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.5e-31 Score=267.81 Aligned_cols=244 Identities=23% Similarity=0.390 Sum_probs=173.7
Q ss_pred eEEEEEcccCCC--CChHHH---HHHHH-HCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHH-HHH
Q 008029 200 HRIAVIGDLGLT--SNSSTT---VDHLI-QNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRW-DGW 272 (580)
Q Consensus 200 ~rfav~gD~g~~--~~~~~~---l~~i~-~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~w-d~~ 272 (580)
++|+++||+|.. .....+ +.++. +.+|||||++||++|+++... .++.+| +.|
T Consensus 1 ~~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~--------------------~~~~~~~~~~ 60 (277)
T cd07378 1 LRFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGS--------------------VDDPRFETTF 60 (277)
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCC--------------------CcchHHHHHH
Confidence 489999999986 222222 23333 369999999999999764211 112233 345
Q ss_pred HHhhhhhccCCCeEEecCCCCCCCCcccc-cHHH--HHhhcCCCCCCCCCCCcceEEEEeC------cEEEEEEcCcccC
Q 008029 273 GRFMEPLTSRVPMMVIEGNHEIEPQVAGI-TFKS--YLTRFAVPSEESGSNSNFYYSFNAG------GVHFIMLGAYVDY 343 (580)
Q Consensus 273 ~~~l~~l~~~vP~~~v~GNHD~~~~~~~~-~f~~--y~~~f~~P~~~~~~~~~~yYsfd~G------~v~fI~Ldt~~~~ 343 (580)
.+.++.+..++|+++++||||........ .+.. +..+|.+| ..||+|+++ +++||+|||....
T Consensus 61 ~~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~--------~~~y~~~~~~~~~~~~~~~i~LDt~~~~ 132 (277)
T cd07378 61 EDVYSAPSLQVPWYLVLGNHDYSGNVSAQIDYTKRPNSPRWTMP--------AYYYRVSFPFPSSDTTVEFIMIDTVPLC 132 (277)
T ss_pred HHHccchhhcCCeEEecCCcccCCCchheeehhccCCCCCccCc--------chheEEEeecCCCCCEEEEEEEeChhHc
Confidence 55555555689999999999987432111 1111 12233333 478999998 7999999997532
Q ss_pred ---------------CCcHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEE
Q 008029 344 ---------------NSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFS 408 (580)
Q Consensus 344 ---------------~~~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~Vdlvls 408 (580)
....+|++||+++|+++. .+|+||++|+|+++..... .....++.|+++|.+++|+++|+
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~Q~~wL~~~L~~~~---~~~~iv~~H~P~~~~~~~~--~~~~~~~~l~~l~~~~~v~~vl~ 207 (277)
T cd07378 133 GNSDDIASPYGPPNGKLAEEQLAWLEKTLAAST---ADWKIVVGHHPIYSSGEHG--PTSCLVDRLLPLLKKYKVDAYLS 207 (277)
T ss_pred CccccccccccCcchhhHHHHHHHHHHHHHhcC---CCeEEEEeCccceeCCCCC--CcHHHHHHHHHHHHHcCCCEEEe
Confidence 246899999999999864 3799999999999765322 12456889999999999999999
Q ss_pred ccccCceeEeeccccccCCCCcEEEEeCCCCccccccCCCCCCCCCCCCCCCCCCcccceeecccccCCCCCCcCCCCCC
Q 008029 409 GHVHAYERMNRVYNYTLDACGPVYITVGDGGNIEQVDVDHADDPGKCPSAGENLPEFGGVCHLNFTSGPAKGKFCWSKQP 488 (580)
Q Consensus 409 GH~H~yeR~~pv~n~~~~~~G~vyIv~G~gG~~e~~~~~~~~~~~~~p~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~p 488 (580)
||+|.+++..+ ...|+.||++|+||...+..... ...+|
T Consensus 208 GH~H~~~~~~~------~~~~~~~i~~G~~~~~~~~~~~~-----------------------------------~~~~~ 246 (277)
T cd07378 208 GHDHNLQHIKD------DGSGTSFVVSGAGSKARPSVKHI-----------------------------------DKVPQ 246 (277)
T ss_pred CCcccceeeec------CCCCcEEEEeCCCcccCCCCCcc-----------------------------------Ccccc
Confidence 99999998864 24699999999988865432100 01235
Q ss_pred CcceeeecCccEEEEEEEcCcceEEEEEEc
Q 008029 489 EWSAYRESSFGHGILEVVNSTYALWTWHRN 518 (580)
Q Consensus 489 ~~sa~~~~~~G~~~l~v~n~t~~~~~~~~~ 518 (580)
.|++++...+||.+++|. ...+.++|+..
T Consensus 247 ~~~~~~~~~~Gy~~i~v~-~~~l~~~~~~~ 275 (277)
T cd07378 247 FFSGFTSSGGGFAYLELT-KEELTVRFYDA 275 (277)
T ss_pred cccccccCCCCEEEEEEe-cCEEEEEEECC
Confidence 788999999999999995 55889999853
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma |
| >cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-26 Score=235.35 Aligned_cols=205 Identities=23% Similarity=0.341 Sum_probs=149.2
Q ss_pred CCeEEEEEcccCCCCC-----------------hHHHHHHHHHC--CCCEEEEcccccccccccccCCCCCcccccCCCC
Q 008029 198 YPHRIAVIGDLGLTSN-----------------SSTTVDHLIQN--DPSLILMVGDLTYANQYLTTGGKAASCYSCAFPD 258 (580)
Q Consensus 198 ~~~rfav~gD~g~~~~-----------------~~~~l~~i~~~--~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~ 258 (580)
.+++|++++|+|.+.. ....++.+.+. +||||+++||+++....
T Consensus 3 ~~~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~----------------- 65 (262)
T cd07395 3 GPFYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPG----------------- 65 (262)
T ss_pred CCEEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcc-----------------
Confidence 3799999999998731 12344555555 89999999999965211
Q ss_pred CccccccHHHHHHHHHhhhhhccCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCCCCCCCcceEEEEeCcEEEEEEc
Q 008029 259 APIRETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLG 338 (580)
Q Consensus 259 ~p~~e~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsfd~G~v~fI~Ld 338 (580)
.+..+.+|+.+.+.++.+...+|+++++||||+........+..|...|. ..||+|++|+++||+||
T Consensus 66 ---~~~~~~~~~~~~~~~~~~~~~vp~~~i~GNHD~~~~~~~~~~~~f~~~~g----------~~~y~~~~~~~~~i~ld 132 (262)
T cd07395 66 ---DELRERQVSDLKDVLSLLDPDIPLVCVCGNHDVGNTPTEESIKDYRDVFG----------DDYFSFWVGGVFFIVLN 132 (262)
T ss_pred ---hhhHHHHHHHHHHHHhhccCCCcEEEeCCCCCCCCCCChhHHHHHHHHhC----------CcceEEEECCEEEEEec
Confidence 01123457777777777767899999999999864333333444544442 35899999999999999
Q ss_pred CcccC------CCcHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCc----chhHHHHHHHHHHHHhcCCcEEEE
Q 008029 339 AYVDY------NSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHY----QEFECMRQEMEALLYQYGVDIVFS 408 (580)
Q Consensus 339 t~~~~------~~~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~----~~~~~~r~~l~~Ll~ky~Vdlvls 408 (580)
+.... ....+|++||+++|+++.+.+.+++||++|+|++....... ......+++|.++|++++|+++|+
T Consensus 133 s~~~~~~~~~~~~~~~ql~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~v~~ 212 (262)
T cd07395 133 SQLFFDPSEVPELAQAQDVWLEEQLEIAKESDCKHVIVFQHIPWFLEDPDEEDSYFNIPKSVRKPLLDKFKKAGVKAVFS 212 (262)
T ss_pred cccccCccccccchHHHHHHHHHHHHHHHhccCCcEEEEECcCCccCCCCCCcccCCcCHHHHHHHHHHHHhcCceEEEE
Confidence 96432 23679999999999997644567899999999985432211 122356789999999999999999
Q ss_pred ccccCceeEeeccccccCCCCcEEEEeCCCCc
Q 008029 409 GHVHAYERMNRVYNYTLDACGPVYITVGDGGN 440 (580)
Q Consensus 409 GH~H~yeR~~pv~n~~~~~~G~vyIv~G~gG~ 440 (580)
||+|.+++.. -.|+.|++++++|.
T Consensus 213 GH~H~~~~~~--------~~g~~~~~~~~~~~ 236 (262)
T cd07395 213 GHYHRNAGGR--------YGGLEMVVTSAIGA 236 (262)
T ss_pred CccccCCceE--------ECCEEEEEcCceec
Confidence 9999987743 24787888877765
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th |
| >PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: |
Back alignment and domain information |
|---|
Probab=99.94 E-value=5.7e-25 Score=240.61 Aligned_cols=261 Identities=23% Similarity=0.390 Sum_probs=143.2
Q ss_pred cccEEEEEeCCCCCCCEEEEEEEeCCCCCccceEEEEcCCCCCCCCCCeEEEEEcccCCCCChHHHHHHHHH-CCCCEEE
Q 008029 152 SGIIHHVKIDGLDPGTKYYYKCGDSKIPAMSAEHVFETLPLPSPTSYPHRIAVIGDLGLTSNSSTTVDHLIQ-NDPSLIL 230 (580)
Q Consensus 152 ~~~~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~~~F~T~p~~~~~~~~~rfav~gD~g~~~~~~~~l~~i~~-~~pDfvl 230 (580)
..+.++|+|+||+|+|+|+||+........|.+++|+|+|..... ++||++++|.+.......+++++.+ .+|||+|
T Consensus 60 ~d~t~~v~v~gL~p~t~Y~Y~~~~~~~~~~s~~g~~rT~p~~~~~--~~r~a~~SC~~~~~~~~~~~~~~a~~~~~D~~l 137 (453)
T PF09423_consen 60 RDFTVKVDVTGLQPGTRYYYRFVVDGGGQTSPVGRFRTAPDGDPD--PFRFAFGSCQNYEDGYFPAYRRIAERDDPDFVL 137 (453)
T ss_dssp GTTEEEEEE-S--TT-EEEEEEEE--TTEE---EEEE--TT-------EEEEEE----CCC---HHHHHHTT-S--SEEE
T ss_pred CCeEeecccCCCCCCceEEEEEEEecCCCCCCceEEEcCCCCCCC--ceEEEEECCCCcccChHHHHHhhhccCCCcEEE
Confidence 468899999999999999999999644578899999999765443 6999999999886566788889988 6999999
Q ss_pred Ecccccccccc--cccCCCCCcccccCCC--CCccccccHHHHHHHH--HhhhhhccCCCeEEecCCCCCCCCccc----
Q 008029 231 MVGDLTYANQY--LTTGGKAASCYSCAFP--DAPIRETYQPRWDGWG--RFMEPLTSRVPMMVIEGNHEIEPQVAG---- 300 (580)
Q Consensus 231 ~~GDl~Y~d~~--~~~GG~~~~c~~~~~~--~~p~~e~y~~~wd~~~--~~l~~l~~~vP~~~v~GNHD~~~~~~~---- 300 (580)
|+||.+|++.. .... ....-.+...| .....+.|+.+|..+. ..++.+.+.+|+++++.+||+.++...
T Consensus 138 ~lGD~IY~d~~~~~~~~-~~~~~~r~~~p~~~~~~l~~yR~~y~~~~~~p~l~~~~~~~P~~~iwDDHdi~nn~~~~~~~ 216 (453)
T PF09423_consen 138 HLGDQIYEDGGGGYGNL-SRRPIGRAPEPAHEAETLDDYRRRYRQYRSDPDLRRLHANVPWIMIWDDHDIGNNWWGDGAE 216 (453)
T ss_dssp E-S-SS----TTSS--T-T---S-----SSSS--SHHHHHHHHHHHHT-HHHHHHHHHSEEEE---STTTSTT-BTTB-S
T ss_pred EeCCeeeccCCcccccc-cccccccccccccccccHHHHHHHHHHHcCCHHHHHHhhcccEEEEccCceecccccCCccc
Confidence 99999999741 0000 00000000000 1223456777776553 456777889999999999999865431
Q ss_pred --------------ccHHHHHhhcCCCCCC-CCCCCcceEEEEeCc-EEEEEEcCcccCC--------------------
Q 008029 301 --------------ITFKSYLTRFAVPSEE-SGSNSNFYYSFNAGG-VHFIMLGAYVDYN-------------------- 344 (580)
Q Consensus 301 --------------~~f~~y~~~f~~P~~~-~~~~~~~yYsfd~G~-v~fI~Ldt~~~~~-------------------- 344 (580)
..+.+|.+..+..... .+.....|++|.+|+ +.|++||++....
T Consensus 217 ~~~~~~~~~~~~~~~a~~ay~e~~p~r~~~~~~~~~~~y~~~~~G~~~~~~~LD~R~~R~~~~~~~~~~~~~~~~~~~~~ 296 (453)
T PF09423_consen 217 NHQDTSGDFQDRRRAAYQAYFEYQPVRNPDPPGDQGRIYRSFRYGDLVEFFMLDTRSYRSPPPCDGPGDTCPAADDPSRT 296 (453)
T ss_dssp TT---HHHHHHHHHHHHHHHHHHS---GGG-BTTB----EEEEETTTEEEEE--SSSS----CCCSSEE--HHHH-TT--
T ss_pred cccccccchHHHHHHHHHHHHhhcCccCCCccCCCCceEEEEecCCceeEEEEechhccccccccccccccccccCCccC
Confidence 0112333333222111 122456799999999 9999999965322
Q ss_pred -CcHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCC-----------CCCcchhHHHHHHHHHHHHhcCCc--EEEEcc
Q 008029 345 -STGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSY-----------SSHYQEFECMRQEMEALLYQYGVD--IVFSGH 410 (580)
Q Consensus 345 -~~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~-----------~~~~~~~~~~r~~l~~Ll~ky~Vd--lvlsGH 410 (580)
.+.+|++||++.|++ +.++|+|+..-.|+.... ...|......|++|.++|.+.++. ++|+|+
T Consensus 297 mLG~~Q~~wL~~~L~~---s~a~~kvi~s~v~~~~~~~~~~~~~~~~~~d~W~g~~~er~~Ll~~l~~~~~~~vV~LSGD 373 (453)
T PF09423_consen 297 MLGEEQWDWLEDWLAS---SQATWKVIGSSVPFSPLNFPDAAEGLPFNMDSWDGYPAERQRLLDFLRESGIRNVVFLSGD 373 (453)
T ss_dssp SS-HHHHHHHHHHHHH-----SSEEEEE-SS--S---SS-SS-S--EETTSGGGSHHHHHHHHHHHHHTT---EEEEE-S
T ss_pred cCCHHHHHHHHHHHhc---CCCcEEEEEeCCceecccccccccccccCCCchhhCHHHHHHHHHHHHhhCCCCEEEEecC
Confidence 278999999999998 448999999988875432 223455567799999999998875 889999
Q ss_pred ccCceeEe
Q 008029 411 VHAYERMN 418 (580)
Q Consensus 411 ~H~yeR~~ 418 (580)
+|...-..
T Consensus 374 vH~~~~~~ 381 (453)
T PF09423_consen 374 VHASAASR 381 (453)
T ss_dssp SSSEEEEE
T ss_pred cchheeee
Confidence 99876654
|
|
| >cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.7e-23 Score=204.65 Aligned_cols=192 Identities=21% Similarity=0.290 Sum_probs=136.3
Q ss_pred EEEEEcccCCCCCh-------------HHHHHHHHHC--CCCEEEEcccccccccccccCCCCCcccccCCCCCcccccc
Q 008029 201 RIAVIGDLGLTSNS-------------STTVDHLIQN--DPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETY 265 (580)
Q Consensus 201 rfav~gD~g~~~~~-------------~~~l~~i~~~--~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y 265 (580)
||++++|+|.+... .++++.+.+. +||+||++||+++.. .
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~-------~------------------ 55 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDG-------S------------------ 55 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCC-------C------------------
Confidence 69999999988531 3345555565 899999999999641 1
Q ss_pred HHHHHHHHHhhhhhccCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCCCCCCCcceEEEEeCcEEEEEEcCcccC--
Q 008029 266 QPRWDGWGRFMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYVDY-- 343 (580)
Q Consensus 266 ~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsfd~G~v~fI~Ldt~~~~-- 343 (580)
...|+.+.+.++.+ .+|++.++||||... .+...|..... .....+|+|+.++++||+||+....
T Consensus 56 ~~~~~~~~~~l~~~--~~p~~~v~GNHD~~~--------~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~lds~~~~~~ 122 (240)
T cd07402 56 PESYERLRELLAAL--PIPVYLLPGNHDDRA--------AMRAVFPELPP---APGFVQYVVDLGGWRLILLDSSVPGQH 122 (240)
T ss_pred HHHHHHHHHHHhhc--CCCEEEeCCCCCCHH--------HHHHhhccccc---cccccceeEecCCEEEEEEeCCCCCCc
Confidence 13456666777766 799999999999731 22222321110 2345689999999999999986432
Q ss_pred --CCcHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcch-hHHHHHHHHHHHHhc-CCcEEEEccccCceeEee
Q 008029 344 --NSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQE-FECMRQEMEALLYQY-GVDIVFSGHVHAYERMNR 419 (580)
Q Consensus 344 --~~~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~-~~~~r~~l~~Ll~ky-~VdlvlsGH~H~yeR~~p 419 (580)
....+|++||++.|++.. ..++|+++|+|++......... ....++.+.+++.++ +|+++|+||+|......
T Consensus 123 ~~~~~~~ql~wL~~~L~~~~---~~~~il~~H~pp~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~- 198 (240)
T cd07402 123 GGELCAAQLDWLEAALAEAP---DKPTLVFLHHPPFPVGIAWMDAIGLRNAEALAAVLARHPNVRAILCGHVHRPIDGS- 198 (240)
T ss_pred CCEECHHHHHHHHHHHHhCC---CCCEEEEECCCCccCCchhhhhhhCCCHHHHHHHHhcCCCeeEEEECCcCchHHeE-
Confidence 236889999999999864 2357888888887653211111 112367899999999 99999999999976553
Q ss_pred ccccccCCCCcEEEEeCCCCcc
Q 008029 420 VYNYTLDACGPVYITVGDGGNI 441 (580)
Q Consensus 420 v~n~~~~~~G~vyIv~G~gG~~ 441 (580)
.+|+.++++|+.|..
T Consensus 199 -------~~g~~~~~~gs~~~~ 213 (240)
T cd07402 199 -------WGGIPLLTAPSTCHQ 213 (240)
T ss_pred -------ECCEEEEEcCcceee
Confidence 368899999987774
|
GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa |
| >COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.2e-23 Score=213.87 Aligned_cols=312 Identities=18% Similarity=0.272 Sum_probs=211.0
Q ss_pred ceEEEEeCC-CCcEEEEEEeCCCCCCCCCCCCCCC-CCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 79 EQIALAISS-PTSMWVSWVSGDAQIGSNVTPLDPS-TVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 79 ~qi~la~~~-~~sm~V~W~T~~~~~g~~~~~~~p~-~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
=+.-++.++ ...-.|-|..-++. |+.-. .+.-.++|++.++..+.+..|+... -| ...+.+
T Consensus 39 F~~GVaSGDp~~~svviWTRl~P~------p~~~g~~v~V~wEvs~~~~f~~ivr~gt~~a----~p-------~~dhtv 101 (522)
T COG3540 39 FTHGVASGDPTATSVVIWTRLDPE------PLNGGRPVPVIWEVSTDENFSNIVRKGTVIA----SP-------ELDHTV 101 (522)
T ss_pred cccccccCCCCCCeEEEEEccCCc------cccCCCCcceEEEecCCccHHHHHhcCCccC----Cc-------ccCceE
Confidence 344566677 55666778876542 22111 2455678888776655555454321 11 135789
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCCCccceEEEEcCCCCCCCCCCeEEEEEcccCCCCChHHHHHHHHHCCCCEEEEccccc
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIPAMSAEHVFETLPLPSPTSYPHRIAVIGDLGLTSNSSTTVDHLIQNDPSLILMVGDLT 236 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~~~F~T~p~~~~~~~~~rfav~gD~g~~~~~~~~l~~i~~~~pDfvl~~GDl~ 236 (580)
+|.++||+|++.|+||+...+ ..|.+.+|||+|+.+....-++|+..++.|...+...+.++|.+.+|||+||.||.+
T Consensus 102 ~v~~~gL~P~~~yfYRf~~~~--~~spvGrtrTapa~~~~i~~~~fa~ascQ~~~~gy~~aY~~ma~~~~D~viH~GDyI 179 (522)
T COG3540 102 HVDLRGLSPDQDYFYRFKAGD--ERSPVGRTRTAPAPGRAIRFVWFADASCQGWEIGYMTAYKTMAKEEPDFVIHLGDYI 179 (522)
T ss_pred EEeccCCCCCceEEEEEeeCC--ccccccccccCCCCCCcchhhhhhhccccccccchhHHHHHHHhcCCCEEEEcCCee
Confidence 999999999999999999876 778999999999987643334444555555555667888999999999999999999
Q ss_pred ccccccccCCCCCccccc-CCCC-----CccccccHHHHHHHH--HhhhhhccCCCeEEecCCCCCCCCccc--------
Q 008029 237 YANQYLTTGGKAASCYSC-AFPD-----APIRETYQPRWDGWG--RFMEPLTSRVPMMVIEGNHEIEPQVAG-------- 300 (580)
Q Consensus 237 Y~d~~~~~GG~~~~c~~~-~~~~-----~p~~e~y~~~wd~~~--~~l~~l~~~vP~~~v~GNHD~~~~~~~-------- 300 (580)
|+++..... .+.+.... ...+ ....+.|+.+|..+. ..++...+..|+++.+.+||..++...
T Consensus 180 Yeyg~~~~~-~~~~~~~~~~~~~~~~~ei~TLddYR~rya~y~~D~nLqaahA~~Pwi~~WDDHEv~NN~~~~~~~nD~~ 258 (522)
T COG3540 180 YEYGPIPDE-VSLNSWKNVVVTQHKSKEIETLDDYRGRYAYYKTDENLQAAHAAFPWIVQWDDHEVANNWSNSIDENDSR 258 (522)
T ss_pred eccCCcccc-cccccccccccCCCCCcceeeHHHHhhHHhhhcccHHHHHhhccCCEEEEeccccccccccccccccCCC
Confidence 997532110 00000000 1111 113457888887663 457778899999999999999865321
Q ss_pred -----------ccHHHHHhhcCCCCCCCC--CCCcceEEEEeCc-EEEEEEcCcccC------C----------------
Q 008029 301 -----------ITFKSYLTRFAVPSEESG--SNSNFYYSFNAGG-VHFIMLGAYVDY------N---------------- 344 (580)
Q Consensus 301 -----------~~f~~y~~~f~~P~~~~~--~~~~~yYsfd~G~-v~fI~Ldt~~~~------~---------------- 344 (580)
..+++|.+. ||..... .....|.+|.||+ +.|.+||++.+. +
T Consensus 259 ~~~k~~~~r~a~A~qAyyE~--mPiR~~~~p~~~~lYR~~tyG~La~~~~LDtR~YR~dqp~~dg~~~~~q~~~~~~~~m 336 (522)
T COG3540 259 YDEKDFVLRAAAARQAYYEH--MPIRYSSLPTDGRLYRSFTYGPLADLFVLDTRSYRTDQPCGDGNPPNCQAVAGSAATM 336 (522)
T ss_pred CChHHHHHHHHHHHHHHHHh--CccccccCCccceeeeeeccccccceeeeehhhhccccccCCCCcchhhhhhCccccc
Confidence 112344443 4544322 2357899999997 679999997654 1
Q ss_pred CcHHHHHHHHHHHHhccCCCCCeEEEEeCCCCcc----CC---------CCCcchhHHHHHHHHHHHHhcCCc--EEEEc
Q 008029 345 STGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYN----SY---------SSHYQEFECMRQEMEALLYQYGVD--IVFSG 409 (580)
Q Consensus 345 ~~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~----s~---------~~~~~~~~~~r~~l~~Ll~ky~Vd--lvlsG 409 (580)
.+..|.+||+..|.+ +++.|.|+....|+-- .. ...+.....-|+.|+.++.+.++. ++|.|
T Consensus 337 lG~~QeqWLk~~L~~---SkatWnVia~q~~~~~~~~d~~~a~~~~~a~~D~wdGy~~~RerLl~fi~~~~~~N~V~Ltg 413 (522)
T COG3540 337 LGEQQEQWLKRGLGA---SKATWNVIAQQMPLGLVVFDGSPATEGQEANADGWDGYPAGRERLLRFIADRKIRNTVVLTG 413 (522)
T ss_pred hhhHHHHHHHhhhhh---cchhhhhhhhhcceeEeecCCCccccCccccccCcCCCcccHHHHHHHHHhcCCCCcEEEec
Confidence 278999999999998 6789999998888621 11 011233344588999999999875 89999
Q ss_pred cccCce
Q 008029 410 HVHAYE 415 (580)
Q Consensus 410 H~H~ye 415 (580)
.+|...
T Consensus 414 DvH~~w 419 (522)
T COG3540 414 DVHYSW 419 (522)
T ss_pred hhHHHH
Confidence 999643
|
|
| >KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-22 Score=198.12 Aligned_cols=204 Identities=20% Similarity=0.345 Sum_probs=135.6
Q ss_pred CCeEEEEEcccCCCCC--hHHHHHH---H-HHCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHH
Q 008029 198 YPHRIAVIGDLGLTSN--SSTTVDH---L-IQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDG 271 (580)
Q Consensus 198 ~~~rfav~gD~g~~~~--~~~~l~~---i-~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~ 271 (580)
..++|+++||+|.... ...+..+ | .+.+.||||.+||++|.++..+. ++++++.
T Consensus 42 gslsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~--------------------~Dp~Fq~ 101 (336)
T KOG2679|consen 42 GSLSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSE--------------------NDPRFQD 101 (336)
T ss_pred CceEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCC--------------------CChhHHh
Confidence 3699999999996532 2222222 2 23589999999999998754221 2233332
Q ss_pred -HHHhhhhhccCCCeEEecCCCCCCCCcccc---cHHHHHhhcCCCCCCCCCCCcceEE---EE--eCcEEEEEEcCccc
Q 008029 272 -WGRFMEPLTSRVPMMVIEGNHEIEPQVAGI---TFKSYLTRFAVPSEESGSNSNFYYS---FN--AGGVHFIMLGAYVD 342 (580)
Q Consensus 272 -~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~---~f~~y~~~f~~P~~~~~~~~~~yYs---fd--~G~v~fI~Ldt~~~ 342 (580)
|.+....-..+.||+.+.||||+.++...+ .+.....||..|.. +|-. .+ .-++.++++|+...
T Consensus 102 sF~nIYT~pSLQkpWy~vlGNHDyrGnV~AQls~~l~~~d~RW~c~rs-------f~~~ae~ve~f~v~~~~f~~d~~~~ 174 (336)
T KOG2679|consen 102 SFENIYTAPSLQKPWYSVLGNHDYRGNVEAQLSPVLRKIDKRWICPRS-------FYVDAEIVEMFFVDTTPFMDDTFTL 174 (336)
T ss_pred hhhhcccCcccccchhhhccCccccCchhhhhhHHHHhhccceecccH-------Hhhcceeeeeeccccccchhhheec
Confidence 333332222356999999999998775442 24555667766642 1111 01 11344445444321
Q ss_pred CC--------------CcHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEE
Q 008029 343 YN--------------STGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFS 408 (580)
Q Consensus 343 ~~--------------~~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~Vdlvls 408 (580)
.. ....++.||+..|++ +.++|+||.+|+|+.+.+ +.+...++++.|.|||+.++||++++
T Consensus 175 ~~~~~ydw~~v~PR~~~~~~~l~~le~~L~~---S~a~wkiVvGHh~i~S~~--~HG~T~eL~~~LlPiL~~n~VdlY~n 249 (336)
T KOG2679|consen 175 CTDDVYDWRGVLPRVKYLRALLSWLEVALKA---SRAKWKIVVGHHPIKSAG--HHGPTKELEKQLLPILEANGVDLYIN 249 (336)
T ss_pred ccccccccccCChHHHHHHHHHHHHHHHHHH---hhcceEEEecccceehhh--ccCChHHHHHHHHHHHHhcCCcEEEe
Confidence 11 146789999999999 568899999999998864 33566789999999999999999999
Q ss_pred ccccCceeEeeccccccCCC-CcEEEEeCCCCc
Q 008029 409 GHVHAYERMNRVYNYTLDAC-GPVYITVGDGGN 440 (580)
Q Consensus 409 GH~H~yeR~~pv~n~~~~~~-G~vyIv~G~gG~ 440 (580)
||+|..|..- +++ ++-|+++|+|..
T Consensus 250 GHDHcLQhis-------~~e~~iqf~tSGagSk 275 (336)
T KOG2679|consen 250 GHDHCLQHIS-------SPESGIQFVTSGAGSK 275 (336)
T ss_pred cchhhhhhcc-------CCCCCeeEEeeCCccc
Confidence 9999998874 434 555666666544
|
|
| >cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=7e-23 Score=209.04 Aligned_cols=197 Identities=21% Similarity=0.319 Sum_probs=136.5
Q ss_pred eEEEEEcccCCCCC--------------hHHHHHHHHHCCCCEEEEcccccccccccccCCCCCcccccCCCCCcccccc
Q 008029 200 HRIAVIGDLGLTSN--------------SSTTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETY 265 (580)
Q Consensus 200 ~rfav~gD~g~~~~--------------~~~~l~~i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y 265 (580)
|||++++|+|.... ..++++++.+.+||+||++||+++.... ..
T Consensus 1 ~r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~----------------------~~ 58 (267)
T cd07396 1 FRFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNA----------------------RA 58 (267)
T ss_pred CeEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCc----------------------hH
Confidence 68999999996542 1234566666789999999999954210 01
Q ss_pred HHHHHHHHHhhhhhccCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCCCCCCCcceEEEEeCcEEEEEEcCccc---
Q 008029 266 QPRWDGWGRFMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYVD--- 342 (580)
Q Consensus 266 ~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsfd~G~v~fI~Ldt~~~--- 342 (580)
+..|+.+.+.++.+ ++|+++++||||...... .+.. +... ...+..||+|++++++||+||+...
T Consensus 59 ~~~~~~~~~~l~~l--~~p~~~v~GNHD~~~~~~-----~~~~-~~~~----~~~~~~yysf~~~~~~~i~lds~~~~~~ 126 (267)
T cd07396 59 EEALDAVLAILDRL--KGPVHHVLGNHDLYNPSR-----EYLL-LYTL----LGLGAPYYSFSPGGIRFIVLDGYDISAL 126 (267)
T ss_pred HHHHHHHHHHHHhc--CCCEEEecCccccccccH-----hhhh-cccc----cCCCCceEEEecCCcEEEEEeCCccccc
Confidence 24566666666665 689999999999863321 1111 0011 1234579999999999999998531
Q ss_pred -------------------------------CCCcHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHH
Q 008029 343 -------------------------------YNSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMR 391 (580)
Q Consensus 343 -------------------------------~~~~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r 391 (580)
.....+|++||+++|+++..+. .++||++|+|++...... ......+
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~~~-~~viV~~Hhp~~~~~~~~-~~~~~~~ 204 (267)
T cd07396 127 GRPEDTPKAENADDNSNLGLYLSEPRFVDWNGGIGEEQLQWLRNELQEADANG-EKVIIFSHFPLHPESTSP-HGLLWNH 204 (267)
T ss_pred cCCCCChhhhhHHHhchhhhhccCccceeccCcCCHHHHHHHHHHHHHHHhcC-CeEEEEEeccCCCCCCCc-cccccCH
Confidence 1235899999999999875332 458999999987654211 1111125
Q ss_pred HHHHHHHHhc-CCcEEEEccccCceeEeeccccccCCCCcEEEEeCCCCc
Q 008029 392 QEMEALLYQY-GVDIVFSGHVHAYERMNRVYNYTLDACGPVYITVGDGGN 440 (580)
Q Consensus 392 ~~l~~Ll~ky-~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyIv~G~gG~ 440 (580)
+.+.++|.++ +|+++|+||+|.++... .+|+.|+++|+-..
T Consensus 205 ~~~~~ll~~~~~V~~v~~GH~H~~~~~~--------~~gi~~~~~~a~~~ 246 (267)
T cd07396 205 EEVLSILRAYGCVKACISGHDHEGGYAQ--------RHGIHFLTLEGMVE 246 (267)
T ss_pred HHHHHHHHhCCCEEEEEcCCcCCCCccc--------cCCeeEEEechhhc
Confidence 6889999996 89999999999987542 46899998887554
|
Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.5e-20 Score=192.63 Aligned_cols=191 Identities=20% Similarity=0.289 Sum_probs=122.4
Q ss_pred CeEEEEEcccCCCC---------Ch----HHHHHHHHHC--CCCEEEEcccccccccccccCCCCCcccccCCCCCcccc
Q 008029 199 PHRIAVIGDLGLTS---------NS----STTVDHLIQN--DPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRE 263 (580)
Q Consensus 199 ~~rfav~gD~g~~~---------~~----~~~l~~i~~~--~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e 263 (580)
++||++++|+|... +. .++++++.+. +|||||++||++... .
T Consensus 14 ~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~-------~---------------- 70 (275)
T PRK11148 14 RVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDH-------S---------------- 70 (275)
T ss_pred CEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCC-------C----------------
Confidence 69999999999742 11 2345555443 699999999999531 1
Q ss_pred ccHHHHHHHHHhhhhhccCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCCCCCCCcceEEEEeCcEEEEEEcCcccC
Q 008029 264 TYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYVDY 343 (580)
Q Consensus 264 ~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsfd~G~v~fI~Ldt~~~~ 343 (580)
...++.+.+.++.+ .+|+++++||||... .+..+.....+ ...++.+..++++||+||+....
T Consensus 71 --~~~~~~~~~~l~~l--~~Pv~~v~GNHD~~~-----~~~~~~~~~~~--------~~~~~~~~~~~~~~i~Lds~~~g 133 (275)
T PRK11148 71 --SEAYQHFAEGIAPL--RKPCVWLPGNHDFQP-----AMYSALQDAGI--------SPAKHVLIGEHWQILLLDSQVFG 133 (275)
T ss_pred --HHHHHHHHHHHhhc--CCcEEEeCCCCCChH-----HHHHHHhhcCC--------CccceEEecCCEEEEEecCCCCC
Confidence 12345566666666 689999999999842 12222221111 11233444557999999986421
Q ss_pred ----CCcHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcc-hhHHHHHHHHHHHHhc-CCcEEEEccccCceeE
Q 008029 344 ----NSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQ-EFECMRQEMEALLYQY-GVDIVFSGHVHAYERM 417 (580)
Q Consensus 344 ----~~~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~-~~~~~r~~l~~Ll~ky-~VdlvlsGH~H~yeR~ 417 (580)
..+.+|++||++.|++... .+-+|+++|+|+.... .+.. ......++|.+++++| +|+++|+||+|.....
T Consensus 134 ~~~G~l~~~ql~wL~~~L~~~~~--~~~vv~~hH~P~~~~~-~~~d~~~l~n~~~l~~ll~~~~~v~~vl~GH~H~~~~~ 210 (275)
T PRK11148 134 VPHGELSEYQLEWLERKLADAPE--RHTLVLLHHHPLPAGC-AWLDQHSLRNAHELAEVLAKFPNVKAILCGHIHQELDL 210 (275)
T ss_pred CcCCEeCHHHHHHHHHHHhhCCC--CCeEEEEcCCCCCCCc-chhhccCCCCHHHHHHHHhcCCCceEEEecccChHHhc
Confidence 2468999999999998642 2324455555654321 1111 0111246899999998 8999999999985443
Q ss_pred eeccccccCCCCcEEEEeCCCCc
Q 008029 418 NRVYNYTLDACGPVYITVGDGGN 440 (580)
Q Consensus 418 ~pv~n~~~~~~G~vyIv~G~gG~ 440 (580)
..+|+.++++++.+.
T Consensus 211 --------~~~gi~~~~~ps~~~ 225 (275)
T PRK11148 211 --------DWNGRRLLATPSTCV 225 (275)
T ss_pred --------eECCEEEEEcCCCcC
Confidence 236787877766554
|
|
| >cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.6e-20 Score=190.43 Aligned_cols=192 Identities=19% Similarity=0.270 Sum_probs=127.9
Q ss_pred EEEEcccCCCCCh--------HHHHHHHHHCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHH
Q 008029 202 IAVIGDLGLTSNS--------STTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWG 273 (580)
Q Consensus 202 fav~gD~g~~~~~--------~~~l~~i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~ 273 (580)
|++++|+|.+... ...++.+.+.+||+++++||+++... ..+ .-...++.+|+.|.
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~--~~~--------------~~~~~~~~~~~~~~ 65 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKT--GNK--------------LPSYQYQEEWQKYY 65 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccc--cCC--------------CcccccHHHHHHHH
Confidence 7899999987542 11345566679999999999995421 110 00123456788888
Q ss_pred Hhhhhhc--cCCCeEEecCCCCCCCCcccccHHHHHhhcC-CCCCCCCCCCcceEE--EEeCcEEEEEEcCccc------
Q 008029 274 RFMEPLT--SRVPMMVIEGNHEIEPQVAGITFKSYLTRFA-VPSEESGSNSNFYYS--FNAGGVHFIMLGAYVD------ 342 (580)
Q Consensus 274 ~~l~~l~--~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~-~P~~~~~~~~~~yYs--fd~G~v~fI~Ldt~~~------ 342 (580)
+.+..+. ...|++.++||||..+.........|..+|. ... ....+|. +..|+++||+||+...
T Consensus 66 ~~~~~~~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~y~~~~~-----~~~~~~~~~~~~~~~~~I~Ldt~~~~~~~~~ 140 (256)
T cd07401 66 NILKESSVINKEKWFDIRGNHDLFNIPSLDSENNYYRKYSATGR-----DGSFSFSHTTRFGNYSFIGVDPTLFPGPKRP 140 (256)
T ss_pred HHHHHhCCCCcceEEEeCCCCCcCCCCCccchhhHHHHhheecC-----CCccceEEEecCCCEEEEEEcCccCCCCCCC
Confidence 8775543 2689999999999964432222223333331 111 1122333 3459999999999642
Q ss_pred ----CCCcHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEEccccCceeEe
Q 008029 343 ----YNSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMN 418 (580)
Q Consensus 343 ----~~~~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR~~ 418 (580)
.....+|++||+++|++.. +.+++||++|+|++...... . ...+ .+.++|++++|+++|+||+|.+++..
T Consensus 141 ~~~~g~l~~~ql~wL~~~L~~~~--~~~~~IV~~HhP~~~~~~~~-~--~~~~-~~~~ll~~~~v~~vl~GH~H~~~~~~ 214 (256)
T cd07401 141 FNFFGSLDKKLLDRLEKELEKST--NSNYTIWFGHYPTSTIISPS-A--KSSS-KFKDLLKKYNVTAYLCGHLHPLGGLE 214 (256)
T ss_pred CceeccCCHHHHHHHHHHHHhcc--cCCeEEEEEcccchhccCCC-c--chhH-HHHHHHHhcCCcEEEeCCccCCCcce
Confidence 2246999999999999864 34579999999986533211 1 1122 39999999999999999999999966
Q ss_pred ec
Q 008029 419 RV 420 (580)
Q Consensus 419 pv 420 (580)
|+
T Consensus 215 p~ 216 (256)
T cd07401 215 PV 216 (256)
T ss_pred ee
Confidence 65
|
TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.80 E-value=8.5e-19 Score=173.20 Aligned_cols=150 Identities=22% Similarity=0.284 Sum_probs=108.8
Q ss_pred eEEEEEcccCCCCCh---------HHHHHHHHHCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHH
Q 008029 200 HRIAVIGDLGLTSNS---------STTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWD 270 (580)
Q Consensus 200 ~rfav~gD~g~~~~~---------~~~l~~i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd 270 (580)
|||++++|+|..... ..+++.+.+.+||+|+++||+++... ...+|+
T Consensus 1 f~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~------------------------~~~~~~ 56 (214)
T cd07399 1 FTLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGD------------------------NDAEWE 56 (214)
T ss_pred CEEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCC------------------------CHHHHH
Confidence 589999999985431 12333444568999999999996421 024688
Q ss_pred HHHHhhhhhc-cCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCCCCCCCcceEEEEeCcEEEEEEcCcccCCCcHHH
Q 008029 271 GWGRFMEPLT-SRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYVDYNSTGAQ 349 (580)
Q Consensus 271 ~~~~~l~~l~-~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsfd~G~v~fI~Ldt~~~~~~~~~Q 349 (580)
.+.+.++.+. ..+|+++++||||. ++.+|+ ....+|
T Consensus 57 ~~~~~~~~l~~~~~p~~~~~GNHD~---------------------------------------~~~ld~----~~~~~q 93 (214)
T cd07399 57 AADKAFARLDKAGIPYSVLAGNHDL---------------------------------------VLALEF----GPRDEV 93 (214)
T ss_pred HHHHHHHHHHHcCCcEEEECCCCcc---------------------------------------hhhCCC----CCCHHH
Confidence 8888888886 67999999999992 223332 235899
Q ss_pred HHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcch-----hHHHHHHHHHHHHhc-CCcEEEEccccCceeEee
Q 008029 350 YAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQE-----FECMRQEMEALLYQY-GVDIVFSGHVHAYERMNR 419 (580)
Q Consensus 350 ~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~-----~~~~r~~l~~Ll~ky-~VdlvlsGH~H~yeR~~p 419 (580)
++||++.|++.. ..++|+++|+|++......... ....++.|++|+++| +|+++|+||+|.+.+...
T Consensus 94 l~WL~~~L~~~~---~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~~~ 166 (214)
T cd07399 94 LQWANEVLKKHP---DRPAILTTHAYLNCDDSRPDSIDYDSDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAGRTTL 166 (214)
T ss_pred HHHHHHHHHHCC---CCCEEEEecccccCCCCcCcccccccccccHHHHHHHHHhCCCCEEEEEccccCCCceEEE
Confidence 999999999853 2358999999988654321111 123356788999999 799999999999988753
|
YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for |
| >cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.77 E-value=9.5e-18 Score=173.63 Aligned_cols=193 Identities=21% Similarity=0.288 Sum_probs=129.3
Q ss_pred EEcccCCCCC---hHHHHHHHHHC--CCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHH--HHHHHHHhh
Q 008029 204 VIGDLGLTSN---SSTTVDHLIQN--DPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQP--RWDGWGRFM 276 (580)
Q Consensus 204 v~gD~g~~~~---~~~~l~~i~~~--~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~--~wd~~~~~l 276 (580)
-+|+.+.... ...+++.+.+. +|||||++||+++.+.+... .+ ... .+..+.+.+
T Consensus 42 ~~G~~~CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~-----------------~~-~~~~~~~~~~~~~l 103 (296)
T cd00842 42 PWGDYGCDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQT-----------------PE-TLVLISISNLTSLL 103 (296)
T ss_pred CCcCcCCCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhc-----------------hh-HHHHHHHHHHHHHH
Confidence 4677765433 24566777776 89999999999976532110 00 111 255566677
Q ss_pred hhhccCCCeEEecCCCCCCCCcc-------cccHHHHHhhcC--CCCCCC-CCCCcceEEEE-eCcEEEEEEcCcccC--
Q 008029 277 EPLTSRVPMMVIEGNHEIEPQVA-------GITFKSYLTRFA--VPSEES-GSNSNFYYSFN-AGGVHFIMLGAYVDY-- 343 (580)
Q Consensus 277 ~~l~~~vP~~~v~GNHD~~~~~~-------~~~f~~y~~~f~--~P~~~~-~~~~~~yYsfd-~G~v~fI~Ldt~~~~-- 343 (580)
+.....+|+++++||||...... ...+..+...|. ++.... ....+.||++. .+++++|+|||...+
T Consensus 104 ~~~~~~~pv~~~~GNHD~~p~~~~~~~~~~~~~~~~~~~~w~~~l~~~~~~~~~~ggYY~~~~~~~l~vI~Lnt~~~~~~ 183 (296)
T cd00842 104 KKAFPDTPVYPALGNHDSYPVNQFPPNNSPSWLYDALAELWKSWLPEEAEETFKKGGYYSVPVKPGLRVISLNTNLYYKK 183 (296)
T ss_pred HHhCCCCCEEEcCCCCCCCcccccCCcccccHHHHHHHHHHHhhcCHHHHHHhhcceEEEEEcCCCeEEEEEeCcccccc
Confidence 77778899999999999975422 122333333332 232111 11245789998 889999999996432
Q ss_pred ---------CCcHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcC--CcEEEEcccc
Q 008029 344 ---------NSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYG--VDIVFSGHVH 412 (580)
Q Consensus 344 ---------~~~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~--VdlvlsGH~H 412 (580)
....+|++||+++|+++++.+ ..++|++|+|+........ ...++.|.+++++|. |.++|+||+|
T Consensus 184 ~~~~~~~~~~~~~~Ql~WL~~~L~~a~~~~-~~v~I~~HiPp~~~~~~~~---~~~~~~~~~ii~~y~~~i~~~~~GH~H 259 (296)
T cd00842 184 NFWLLGSNETDPAGQLQWLEDELQEAEQAG-EKVWIIGHIPPGVNSYDTL---ENWSERYLQIINRYSDTIAGQFFGHTH 259 (296)
T ss_pred ChhhhccCCCCHHHHHHHHHHHHHHHHHCC-CeEEEEeccCCCCcccccc---hHHHHHHHHHHHHHHHhhheeeecccc
Confidence 234789999999999976443 3477889999876533211 234678999999997 7889999999
Q ss_pred CceeEe
Q 008029 413 AYERMN 418 (580)
Q Consensus 413 ~yeR~~ 418 (580)
..+...
T Consensus 260 ~d~~~~ 265 (296)
T cd00842 260 RDEFRV 265 (296)
T ss_pred cceEEE
Confidence 977653
|
Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but |
| >PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11 | Back alignment and domain information |
|---|
Probab=99.71 E-value=2e-17 Score=152.24 Aligned_cols=191 Identities=26% Similarity=0.256 Sum_probs=101.6
Q ss_pred eEEEEEcccCCCCChH-----HHHHHHHHCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHH-
Q 008029 200 HRIAVIGDLGLTSNSS-----TTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWG- 273 (580)
Q Consensus 200 ~rfav~gD~g~~~~~~-----~~l~~i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~- 273 (580)
|||+++||+|...... .......+.++|+||++||+++.... ...+....
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~------------------------~~~~~~~~~ 56 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNP------------------------SEEWRAQFW 56 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSH------------------------HHHHHHHHH
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccc------------------------cccchhhhc
Confidence 6999999999985533 23334456799999999999975321 01111111
Q ss_pred HhhhhhccCCCeEEecCCCCCCCCcccccHHHHHhhcC-CCCCCCCCCCcceEEEEeCcEEEEEEcCcccCCCcHHHHHH
Q 008029 274 RFMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFA-VPSEESGSNSNFYYSFNAGGVHFIMLGAYVDYNSTGAQYAW 352 (580)
Q Consensus 274 ~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~-~P~~~~~~~~~~yYsfd~G~v~fI~Ldt~~~~~~~~~Q~~W 352 (580)
.........+|+++++||||+...........+..... ..........+...........+..............+..|
T Consensus 57 ~~~~~~~~~~~~~~~~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (200)
T PF00149_consen 57 FFIRLLNPKIPVYFILGNHDYYSGNSFYGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEW 136 (200)
T ss_dssp HHHHHHHTTTTEEEEE-TTSSHHHHHHHHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHH
T ss_pred cchhhhhccccccccccccccceeccccccccccccccccccccccccCcceeeecccccccccccccccccccccchhc
Confidence 12333456899999999999863221111111111110 00000000000001122222222222222111222333333
Q ss_pred HHHHHHhccCCCCCeEEEEeCCCCccCCCCCcch--hHHHHHHHHHHHHhcCCcEEEEccccCc
Q 008029 353 LKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQE--FECMRQEMEALLYQYGVDIVFSGHVHAY 414 (580)
Q Consensus 353 Le~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~--~~~~r~~l~~Ll~ky~VdlvlsGH~H~y 414 (580)
+...+....+...+++|+++|+|++......... ....++.+..++++++|+++|+||+|.|
T Consensus 137 ~~~~~~~~~~~~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~GH~H~~ 200 (200)
T PF00149_consen 137 WLWLLLLLEAKNDDPVIVFTHHPPYSSSSDSSSYGNESKGREALEELLKKYNVDLVLSGHTHRY 200 (200)
T ss_dssp HHHHHHHHHEEEESEEEEEESSSSSTTSSSTHHHSSEEEHHHHHHHHHHHTTCSEEEEESSSSE
T ss_pred ccccccccccccccceeEEEecCCCCccccccccchhhccHHHHHHHHhhCCCCEEEeCceecC
Confidence 3333333223456789999999999875432110 1235778999999999999999999986
|
The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C .... |
| >cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.69 E-value=9.5e-16 Score=155.36 Aligned_cols=172 Identities=17% Similarity=0.203 Sum_probs=110.6
Q ss_pred HHHHHHHH-CCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHHHhhhhhccCCCeEEecCCCCC
Q 008029 216 TTVDHLIQ-NDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEI 294 (580)
Q Consensus 216 ~~l~~i~~-~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~ 294 (580)
+....+.+ .+||+|+++||+++..... ..+.|...++.|.+.+.++...+|++.++||||+
T Consensus 35 ~~~~~~~~~l~PD~vv~lGDL~d~G~~~------------------~~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDi 96 (257)
T cd08163 35 RNWRYMQKQLKPDSTIFLGDLFDGGRDW------------------ADEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDI 96 (257)
T ss_pred HHHHHHHHhcCCCEEEEecccccCCeeC------------------cHHHHHHHHHHHHHHhcCCCccceEEEeCCCccc
Confidence 34444444 5899999999998642110 0112222334444555444345899999999998
Q ss_pred CCCccc--ccHHHHHhhcCCCCCCCCCCCcceEEEEeCcEEEEEEcCccc-----CCCcHHHHHHHHHHHHhccCCCCCe
Q 008029 295 EPQVAG--ITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYVD-----YNSTGAQYAWLKEDLHKLDRTVTPW 367 (580)
Q Consensus 295 ~~~~~~--~~f~~y~~~f~~P~~~~~~~~~~yYsfd~G~v~fI~Ldt~~~-----~~~~~~Q~~WLe~~L~~~~r~~~pw 367 (580)
...... .....|...|. ..+|+|++|+++||+||+... .....+|.+||++.|+.... .. .
T Consensus 97 g~~~~~~~~~~~rf~~~Fg----------~~~~~~~~~~~~fV~Lds~~l~~~~~~~~~~~~~~~l~~~l~~~~~-~~-p 164 (257)
T cd08163 97 GFGNGVVLPVRQRFEKYFG----------PTSRVIDVGNHTFVILDTISLSNKDDPDVYQPPREFLHSFSAMKVK-SK-P 164 (257)
T ss_pred CCCCCCCHHHHHHHHHHhC----------CCceEEEECCEEEEEEccccccCCcccccchhHHHHHHhhhhccCC-CC-c
Confidence 543221 23456666663 235899999999999999532 22456899999999987542 23 3
Q ss_pred EEEEeCCCCccCCCCCcc---h------------hH-HH-HHHHHHHHHhcCCcEEEEccccCceeE
Q 008029 368 LAAAWHPPWYNSYSSHYQ---E------------FE-CM-RQEMEALLYQYGVDIVFSGHVHAYERM 417 (580)
Q Consensus 368 vIv~~H~P~y~s~~~~~~---~------------~~-~~-r~~l~~Ll~ky~VdlvlsGH~H~yeR~ 417 (580)
+|+++|+|+|.......+ + .+ .+ .+.-..||.+.++.+||+||+|.|=..
T Consensus 165 ~ILl~H~Plyr~~~~~cg~~re~~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~C~~ 231 (257)
T cd08163 165 RILLTHVPLYRPPNTSCGPLRESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDYCEV 231 (257)
T ss_pred EEEEeccccccCCCCCCCCccccCCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCcccee
Confidence 899999999865321100 0 00 11 234457888889999999999998554
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site |
| >cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.8e-15 Score=148.97 Aligned_cols=190 Identities=18% Similarity=0.212 Sum_probs=117.4
Q ss_pred EEEcccCCCC-----------ChHHHHHHHHHC------CCCEEEEcccccccccccccCCCCCcccccCCCCCcccccc
Q 008029 203 AVIGDLGLTS-----------NSSTTVDHLIQN------DPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETY 265 (580)
Q Consensus 203 av~gD~g~~~-----------~~~~~l~~i~~~------~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y 265 (580)
.+++|+|... ++.+.++++.+. +||+||++||+++.. . +
T Consensus 2 ~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~-------~-----------------~ 57 (232)
T cd07393 2 FAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAM-------K-----------------L 57 (232)
T ss_pred eEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCC-------C-----------------h
Confidence 5789999762 123555555554 999999999998421 0 0
Q ss_pred HHHHHHHHHhhhhhccCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCCCCCCCcceEEEEeCcEEEEEEcCccc-C-
Q 008029 266 QPRWDGWGRFMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYVD-Y- 343 (580)
Q Consensus 266 ~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsfd~G~v~fI~Ldt~~~-~- 343 (580)
.......+.++.+ ..|+++|+||||+... ....+...+. .. +-.-....++..+++.|++++.+.. +
T Consensus 58 -~~~~~~l~~l~~l--~~~v~~V~GNHD~~~~----~~~~~~~~l~--~~--~~~~~~n~~~~~~~i~i~G~~~~~~~~~ 126 (232)
T cd07393 58 -EEAKLDLAWIDAL--PGTKVLLKGNHDYWWG----SASKLRKALE--ES--RLALLFNNAYIDDDVAICGTRGWDNPGN 126 (232)
T ss_pred -HHHHHHHHHHHhC--CCCeEEEeCCccccCC----CHHHHHHHHH--hc--CeEEeccCcEEECCEEEEEEEeeCCCCC
Confidence 1122223344443 3578999999998421 1222222221 00 0000012445668899998764221 0
Q ss_pred ---------------CCcHHHHHHHHHHHHhccCCC-CCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEE
Q 008029 344 ---------------NSTGAQYAWLKEDLHKLDRTV-TPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVF 407 (580)
Q Consensus 344 ---------------~~~~~Q~~WLe~~L~~~~r~~-~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~Vdlvl 407 (580)
....+|++||++.|+++.... ..++|++.|+|++..... ...+..++++++++++|
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~L~~~~~~~~~~~~i~~~H~p~~~~~~~--------~~~~~~~~~~~~v~~vl 198 (232)
T cd07393 127 PWPPINETLKVEEDEKIFERELERLELSLKAAKKREKEKIKIVMLHYPPANENGD--------DSPISKLIEEYGVDICV 198 (232)
T ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCcCCCCC--------HHHHHHHHHHcCCCEEE
Confidence 013569999999999864322 246899999998765321 23678889999999999
Q ss_pred EccccCceeEeeccccccCCCCcEEEEeCCC
Q 008029 408 SGHVHAYERMNRVYNYTLDACGPVYITVGDG 438 (580)
Q Consensus 408 sGH~H~yeR~~pv~n~~~~~~G~vyIv~G~g 438 (580)
+||+|.+++..|+.. ..+|+.|+++.++
T Consensus 199 ~GH~H~~~~~~~~~~---~~~gi~~~~~~~~ 226 (232)
T cd07393 199 YGHLHGVGRDRAING---ERGGIRYQLVSAD 226 (232)
T ss_pred ECCCCCCcccccccc---eECCEEEEEEcch
Confidence 999999988776532 2457777766553
|
DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat |
| >cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.5e-15 Score=148.23 Aligned_cols=150 Identities=21% Similarity=0.280 Sum_probs=96.3
Q ss_pred CeEEEEEcccCCCCCh------------HHHHHH-HHHCCCCEEEEcccccccccccccCCCCCcccccCCCCCcccccc
Q 008029 199 PHRIAVIGDLGLTSNS------------STTVDH-LIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETY 265 (580)
Q Consensus 199 ~~rfav~gD~g~~~~~------------~~~l~~-i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y 265 (580)
.+||++++|+|..... .+.+.+ +.+.+||+||++||+++.... ...
T Consensus 2 ~~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~--------------------~~~- 60 (199)
T cd07383 2 KFKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENT--------------------NDN- 60 (199)
T ss_pred ceEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCC--------------------chH-
Confidence 4899999999986532 122333 334689999999999975311 000
Q ss_pred HHHHHHHHHhhhhhc-cCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCCCCCCCcceEEEEeCcEEEEEEcCcccCC
Q 008029 266 QPRWDGWGRFMEPLT-SRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYVDYN 344 (580)
Q Consensus 266 ~~~wd~~~~~l~~l~-~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsfd~G~v~fI~Ldt~~~~~ 344 (580)
.+..|.+.++.+. .++|+++++||||. ...
T Consensus 61 --~~~~~~~~~~~l~~~~~p~~~~~GNHD~-----------------------------------------------~g~ 91 (199)
T cd07383 61 --STSALDKAVSPMIDRKIPWAATFGNHDG-----------------------------------------------YDW 91 (199)
T ss_pred --HHHHHHHHHHHHHHcCCCEEEECccCCC-----------------------------------------------CCC
Confidence 1233344444443 37999999999991 112
Q ss_pred CcHHHHHHHHHHHHhcc--CCCCCeEEEEeCCCCccCCCCC---------cch---hHHHHHHH-HHHHHhcCCcEEEEc
Q 008029 345 STGAQYAWLKEDLHKLD--RTVTPWLAAAWHPPWYNSYSSH---------YQE---FECMRQEM-EALLYQYGVDIVFSG 409 (580)
Q Consensus 345 ~~~~Q~~WLe~~L~~~~--r~~~pwvIv~~H~P~y~s~~~~---------~~~---~~~~r~~l-~~Ll~ky~VdlvlsG 409 (580)
....|++||+++|++.. +....+.++++|+|+......+ ..+ .......+ ..+.+..+|+++|+|
T Consensus 92 l~~~ql~wL~~~l~~~~~~~~~~~~~l~f~H~P~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~v~~v~~G 171 (199)
T cd07383 92 IRPSQIEWFKETSAALKKKYGKPIPSLAFFHIPLPEYREVWEGKGKVPGINNEKVCCPKINSGLFKALLERGDVKGVFCG 171 (199)
T ss_pred CCHHHHHHHHHHHHHHhhccCCCCcceEEEecChHHHHhhhcccCCCCccCCcccCCCcCCcHHHHHHHHcCCeEEEEeC
Confidence 35799999999999863 2234578999999976532110 001 00112334 444566789999999
Q ss_pred cccCceeEe
Q 008029 410 HVHAYERMN 418 (580)
Q Consensus 410 H~H~yeR~~ 418 (580)
|+|.++...
T Consensus 172 H~H~~~~~~ 180 (199)
T cd07383 172 HDHGNDFCG 180 (199)
T ss_pred CCCCcceec
Confidence 999987654
|
DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP |
| >cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.3e-14 Score=139.04 Aligned_cols=167 Identities=16% Similarity=0.229 Sum_probs=102.5
Q ss_pred EEEEcccCCCCChHHHHHHHHHCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHHHhhhhhcc
Q 008029 202 IAVIGDLGLTSNSSTTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRFMEPLTS 281 (580)
Q Consensus 202 fav~gD~g~~~~~~~~l~~i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~~~l~~l~~ 281 (580)
|+++||+|........ ..+.+.++|+||++||+++.. . .+.| ..+ +.++.+
T Consensus 1 i~~~sD~H~~~~~~~~-~~~~~~~~D~vv~~GDl~~~~-------~--------------~~~~----~~~-~~l~~~-- 51 (188)
T cd07392 1 ILAISDIHGDVEKLEA-IILKAEEADAVIVAGDITNFG-------G--------------KEAA----VEI-NLLLAI-- 51 (188)
T ss_pred CEEEEecCCCHHHHHH-HHhhccCCCEEEECCCccCcC-------C--------------HHHH----HHH-HHHHhc--
Confidence 5789999987543322 345567899999999999531 1 0111 112 344333
Q ss_pred CCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCCCCCCCcceEEEEeCcEEEEEEcCccc------CCCcHHHHHHHHH
Q 008029 282 RVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYVD------YNSTGAQYAWLKE 355 (580)
Q Consensus 282 ~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsfd~G~v~fI~Ldt~~~------~~~~~~Q~~WLe~ 355 (580)
++|+++++||||... ...+ + ..... ...+ ..+.+++++|+++++... .....+|++|+ +
T Consensus 52 ~~p~~~v~GNHD~~~------~~~~---~--~~~~~-~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-~ 116 (188)
T cd07392 52 GVPVLAVPGNCDTPE------ILGL---L--TSAGL-NLHG--KVVEVGGYTFVGIGGSNPTPFNTPIELSEEEIVSD-G 116 (188)
T ss_pred CCCEEEEcCCCCCHH------HHHh---h--hcCcE-ecCC--CEEEECCEEEEEeCCCCCCCCCCccccCHHHHHHh-h
Confidence 789999999999631 1111 1 00000 0011 345678899999987431 13467899998 4
Q ss_pred HHHhccCCCCCeEEEEeCCCCccCCCC-CcchhHHHHHHHHHHHHhcCCcEEEEccccCce
Q 008029 356 DLHKLDRTVTPWLAAAWHPPWYNSYSS-HYQEFECMRQEMEALLYQYGVDIVFSGHVHAYE 415 (580)
Q Consensus 356 ~L~~~~r~~~pwvIv~~H~P~y~s~~~-~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~ye 415 (580)
.|+.. .....|+++|+|++..... .......-.+.+.+++++++++++|+||+|.-.
T Consensus 117 ~l~~~---~~~~~ilv~H~pp~~~~~d~~~~~~~~g~~~l~~li~~~~~~~~l~GH~H~~~ 174 (188)
T cd07392 117 RLNNL---LAKNLILVTHAPPYGTAVDRVSGGFHVGSKAIRKFIEERQPLLCICGHIHESR 174 (188)
T ss_pred hhhcc---CCCCeEEEECCCCcCCcccccCCCCccCCHHHHHHHHHhCCcEEEEecccccc
Confidence 44432 2345888999998763111 111101124678899999999999999999854
|
PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina |
| >TIGR03729 acc_ester putative phosphoesterase | Back alignment and domain information |
|---|
Probab=99.60 E-value=7.9e-15 Score=147.30 Aligned_cols=176 Identities=20% Similarity=0.248 Sum_probs=108.5
Q ss_pred EEEEEcccCCCCCh-------HHHHHHHHHCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHH
Q 008029 201 RIAVIGDLGLTSNS-------STTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWG 273 (580)
Q Consensus 201 rfav~gD~g~~~~~-------~~~l~~i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~ 273 (580)
||++++|+|..... ...++.+.+.++|+|+++||++... .+...+.
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~---------------------------~~~~~~~ 53 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDF---------------------------QRSLPFI 53 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccch---------------------------hhHHHHH
Confidence 58999999975322 2345556677999999999999421 0112233
Q ss_pred HhhhhhccCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCCCCCCCcceEEEEeCcEEEEEEcCcccCC---------
Q 008029 274 RFMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYVDYN--------- 344 (580)
Q Consensus 274 ~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsfd~G~v~fI~Ldt~~~~~--------- 344 (580)
+.+.++ ..+|++.++||||+.... .+..+...+. + ....+.++.+..++++|++++.+.++.
T Consensus 54 ~~l~~~-~~~pv~~v~GNHD~~~~~---~~~~~~~~~~-~----~~l~~~~~~~~~~~~~~ig~~gw~d~~~~~~~~~~~ 124 (239)
T TIGR03729 54 EKLQEL-KGIKVTFNAGNHDMLKDL---TYEEIESNDS-P----LYLHNRFIDIPNTQWRIIGNNGWYDYSFSNDKTSKE 124 (239)
T ss_pred HHHHHh-cCCcEEEECCCCCCCCCC---CHHHHHhccc-h----hhhcccccccCCCceEEEeeccceecccccccCHHH
Confidence 333332 468999999999985221 1222222110 0 001223344445778888888543321
Q ss_pred ----------------------CcHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCC------CCcchhHH--HHHHH
Q 008029 345 ----------------------STGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYS------SHYQEFEC--MRQEM 394 (580)
Q Consensus 345 ----------------------~~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~------~~~~~~~~--~r~~l 394 (580)
...+|++||++.|++... . .+|+++|+|+..... ..+..... ....|
T Consensus 125 ~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~--~-~~ivvtH~pP~~~~~~~~~~~~~~~~~~~~~~s~~l 201 (239)
T TIGR03729 125 ILRWKKSFWFDRRIKRPMSDPERTAIVLKQLKKQLNQLDN--K-QVIFVTHFVPHRDFIYVPMDHRRFDMFNAFLGSQHF 201 (239)
T ss_pred HHHhhhcEEeecccCCCCChHHHHHHHHHHHHHHHHhcCC--C-CEEEEEcccchHHHhcCCCCCcchhhhhhccChHHH
Confidence 136789999999988642 2 378888887754211 11211111 14689
Q ss_pred HHHHHhcCCcEEEEccccCce
Q 008029 395 EALLYQYGVDIVFSGHVHAYE 415 (580)
Q Consensus 395 ~~Ll~ky~VdlvlsGH~H~ye 415 (580)
.+++++++|+++|+||+|.-.
T Consensus 202 ~~li~~~~v~~~i~GH~H~~~ 222 (239)
T TIGR03729 202 GQLLVKYEIKDVIFGHLHRRF 222 (239)
T ss_pred HHHHHHhCCCEEEECCccCCC
Confidence 999999999999999999864
|
Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system. |
| >TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family | Back alignment and domain information |
|---|
Probab=99.60 E-value=7.8e-15 Score=157.04 Aligned_cols=114 Identities=20% Similarity=0.236 Sum_probs=79.0
Q ss_pred CcceEEEE-eCcEEEEEEcCcccC-----CCcHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcc-----hhHH
Q 008029 321 SNFYYSFN-AGGVHFIMLGAYVDY-----NSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQ-----EFEC 389 (580)
Q Consensus 321 ~~~yYsfd-~G~v~fI~Ldt~~~~-----~~~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~-----~~~~ 389 (580)
+..||+|+ .++++||+||+.... ....+|++||+++|++. +.+++||++|||++........ ....
T Consensus 290 G~~YYSFd~~ggvrfIvLDSt~~~G~~~G~L~eeQL~WLeqeLa~a---~~k~VVVf~HHPp~s~g~~~~Dp~~pg~~~~ 366 (496)
T TIGR03767 290 GTGYYTFDIAGGVRGISMDTTNRAGGDEGSLGQTQFKWIKDTLRAS---SDTLFVLFSHHTSWSMVNELTDPVDPGEKRH 366 (496)
T ss_pred CCceEEEEeECCEEEEEEeCCCcCCCcCCccCHHHHHHHHHHHhcC---CCCCEEEEECCCCcccccccccccccccccc
Confidence 56799999 899999999996431 34799999999999974 3456999999998765432110 1112
Q ss_pred HHHHHHHHHHhc-CCcEEEEccccCceeEeec-cccccCCCCcEEEEeCC
Q 008029 390 MRQEMEALLYQY-GVDIVFSGHVHAYERMNRV-YNYTLDACGPVYITVGD 437 (580)
Q Consensus 390 ~r~~l~~Ll~ky-~VdlvlsGH~H~yeR~~pv-~n~~~~~~G~vyIv~G~ 437 (580)
..++|.++|++| +|.++|+||.|......-- -+...-..|...|.+++
T Consensus 367 n~~eLldLL~~ypnV~aVfsGHvH~n~i~~~~~~~~~~p~~gfweI~TaS 416 (496)
T TIGR03767 367 LGTELVSLLLEHPNVLAWVNGHTHSNKITAHRRVEGVGKDKGFWEINTAS 416 (496)
T ss_pred CHHHHHHHHhcCCCceEEEECCcCCCccccccCCCCCCCcCCeEEEeccc
Confidence 346899999999 7999999999986544210 01111123666676654
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202. |
| >COG1409 Icc Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.9e-13 Score=140.06 Aligned_cols=179 Identities=24% Similarity=0.305 Sum_probs=117.3
Q ss_pred eEEEEEcccCCCC--C-h----HHHHHHHHHCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHH
Q 008029 200 HRIAVIGDLGLTS--N-S----STTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGW 272 (580)
Q Consensus 200 ~rfav~gD~g~~~--~-~----~~~l~~i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~ 272 (580)
+||++++|.|... . . .++++++...+||++|++||+++.. . ...++..
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~~-------~------------------~~~~~~~ 55 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTNDG-------E------------------PEEYRRL 55 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCCC-------C------------------HHHHHHH
Confidence 4899999999982 2 2 2344566667899999999999641 1 1233445
Q ss_pred HHhhhhhccCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCCCCCCCcceEEEEe-CcEEEEEEcCcccC----CCcH
Q 008029 273 GRFMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSNFYYSFNA-GGVHFIMLGAYVDY----NSTG 347 (580)
Q Consensus 273 ~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsfd~-G~v~fI~Ldt~~~~----~~~~ 347 (580)
.++++.+....|++++|||||..... ...+...+.... ..+..... ++++++.+|+.... ....
T Consensus 56 ~~~l~~~~~~~~~~~vpGNHD~~~~~----~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~d~~~~~~~~G~~~~ 124 (301)
T COG1409 56 KELLARLELPAPVIVVPGNHDARVVN----GEAFSDQFFNRY-------AVLVGACSSGGWRVIGLDSSVPGVPLGRLGA 124 (301)
T ss_pred HHHHhhccCCCceEeeCCCCcCCchH----HHHhhhhhcccC-------cceEeeccCCceEEEEecCCCCCCCCCEECH
Confidence 56666555578999999999986432 222222221110 01111222 67899999986542 3579
Q ss_pred HHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcC--CcEEEEccccCc
Q 008029 348 AQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYG--VDIVFSGHVHAY 414 (580)
Q Consensus 348 ~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~--VdlvlsGH~H~y 414 (580)
.|++||++.|++........+|+++|+|+.................+..++..++ |+++|+||.|.-
T Consensus 125 ~q~~~l~~~l~~~~~~~~~~~v~~~hh~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~vl~GH~H~~ 193 (301)
T COG1409 125 EQLDWLEEALAAAPERAKDTVVVLHHHPLPSPGTGVDRVALRDAGELLDVLIAHGNDVRLVLSGHIHLA 193 (301)
T ss_pred HHHHHHHHHHHhCccccCceEEEecCCCCCCCCCccceeeeecchhHHHHHHhcCCceEEEEeCccccc
Confidence 9999999999986533112467888888776543322222233456777888888 999999999976
|
|
| >PF14008 Metallophos_C: Iron/zinc purple acid phosphatase-like protein C; PDB: 3KBP_B 1KBP_B 4KBP_C 2QFP_B 2QFR_A 1XZW_B | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.6e-14 Score=112.17 Aligned_cols=62 Identities=42% Similarity=0.664 Sum_probs=40.0
Q ss_pred CCcEEEEeCCCCccccccCCCCCCCCCCCCCCCCCCcccceeecccccCCCCCCcCCCCCCCcceeeecCccEEEEEEEc
Q 008029 428 CGPVYITVGDGGNIEQVDVDHADDPGKCPSAGENLPEFGGVCHLNFTSGPAKGKFCWSKQPEWSAYRESSFGHGILEVVN 507 (580)
Q Consensus 428 ~G~vyIv~G~gG~~e~~~~~~~~~~~~~p~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~p~~sa~~~~~~G~~~l~v~n 507 (580)
.|||||++|+||+ ++.. ++.++|+|+++|..+|||++|+|.|
T Consensus 1 kapVhiv~G~aG~--~l~~------------------------------------~~~~~~~wsa~r~~~~Gy~~l~v~N 42 (62)
T PF14008_consen 1 KAPVHIVVGAAGN--GLDP------------------------------------FPYPPPEWSAFRDSEYGYGRLTVAN 42 (62)
T ss_dssp TS-EEEEE--S-T------------------------------------------B-SS--TTEEEEE---EEEEEEE-S
T ss_pred CCCEEEEECcCCC--Cccc------------------------------------ccCCCCCeeeeeccccCEEEEEEEc
Confidence 4799999999999 3221 1246799999999999999999999
Q ss_pred CcceEEEEEEccCCCCCCccceEE
Q 008029 508 STYALWTWHRNQDNYKEDSRGDHI 531 (580)
Q Consensus 508 ~t~~~~~~~~~~~~~~~~~v~d~~ 531 (580)
+|||+|+|+++.++ +|+|+|
T Consensus 43 ~T~l~~e~i~~~~g----~v~D~f 62 (62)
T PF14008_consen 43 ATHLHWEFIRSDDG----SVLDEF 62 (62)
T ss_dssp SSEEEEEEEETTS-----T-CEE-
T ss_pred CCeEEEEEEECCCC----cEecCC
Confidence 99999999999886 399986
|
|
| >cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.7e-13 Score=125.04 Aligned_cols=132 Identities=26% Similarity=0.376 Sum_probs=90.7
Q ss_pred EEEEcccCCCCChH-----------HHHHHHHHCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHH
Q 008029 202 IAVIGDLGLTSNSS-----------TTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWD 270 (580)
Q Consensus 202 fav~gD~g~~~~~~-----------~~l~~i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd 270 (580)
|++++|+|.+.... ..++.+.+.++|+|+++||+++.. . +..|+
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~-------~------------------~~~~~ 55 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRG-------L------------------PEEFE 55 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCC-------C------------------HHHHH
Confidence 57899999875421 134445567999999999999641 1 23456
Q ss_pred HHHHhhhhhccC-CCeEEecCCCCCCCCcccccHHHHHhhcCCCCCCCCCCCcceEEEEeCcEEEEEEcCcccCCCcHHH
Q 008029 271 GWGRFMEPLTSR-VPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYVDYNSTGAQ 349 (580)
Q Consensus 271 ~~~~~l~~l~~~-vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsfd~G~v~fI~Ldt~~~~~~~~~Q 349 (580)
.+.++++.+... +|++.++||||.
T Consensus 56 ~~~~~~~~l~~~~~~~~~v~GNHD~------------------------------------------------------- 80 (144)
T cd07400 56 EAREFLDALPAPLEPVLVVPGNHDV------------------------------------------------------- 80 (144)
T ss_pred HHHHHHHHccccCCcEEEeCCCCeE-------------------------------------------------------
Confidence 666777776543 699999999995
Q ss_pred HHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEEccccCceeEeeccccccCCCC
Q 008029 350 YAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDACG 429 (580)
Q Consensus 350 ~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR~~pv~n~~~~~~G 429 (580)
|+++|+|++......... ...++.+.+++.+++++++++||+|......-. ...++
T Consensus 81 -------------------iv~~Hhp~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~l~GH~H~~~~~~~~----~~~~~ 136 (144)
T cd07400 81 -------------------IVVLHHPLVPPPGSGRER-LLDAGDALKLLAEAGVDLVLHGHKHVPYVGNIS----NAGGG 136 (144)
T ss_pred -------------------EEEecCCCCCCCcccccc-CCCHHHHHHHHHHcCCCEEEECCCCCcCeeecc----CCCCC
Confidence 788888877654321111 114567999999999999999999987654311 12456
Q ss_pred cEEEEeCC
Q 008029 430 PVYITVGD 437 (580)
Q Consensus 430 ~vyIv~G~ 437 (580)
++++..|+
T Consensus 137 ~~~~~aGs 144 (144)
T cd07400 137 LVVIGAGT 144 (144)
T ss_pred EEEEecCC
Confidence 67776664
|
YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv |
| >cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.47 E-value=7e-13 Score=131.13 Aligned_cols=187 Identities=20% Similarity=0.187 Sum_probs=112.9
Q ss_pred CeEEEEEcccCCCCC-----hHHHHHHHHHCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHH
Q 008029 199 PHRIAVIGDLGLTSN-----SSTTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWG 273 (580)
Q Consensus 199 ~~rfav~gD~g~~~~-----~~~~l~~i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~ 273 (580)
++||++++|+|.... ..+.++.+.+.+||+++++||+++.... .. +.+.
T Consensus 1 ~~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~------------------------~~--~~~~ 54 (223)
T cd07385 1 GLRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVD------------------------VL--ELLL 54 (223)
T ss_pred CCEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcch------------------------hh--HHHH
Confidence 479999999998753 2345666667899999999999964210 00 2345
Q ss_pred HhhhhhccCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCCCCCCCcceEEEEeCcEEEEEEcCcccCCCcHHHHHHH
Q 008029 274 RFMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYVDYNSTGAQYAWL 353 (580)
Q Consensus 274 ~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsfd~G~v~fI~Ldt~~~~~~~~~Q~~WL 353 (580)
+.++.+....|+++++||||+...... .+........+.. ..+.+..++.++..+....-. ......+++
T Consensus 55 ~~l~~l~~~~~v~~v~GNHD~~~~~~~-~~~~~l~~~~v~~-----L~~~~~~~~~~~~~i~i~G~~----~~~~~~~~~ 124 (223)
T cd07385 55 ELLKKLKAPLGVYAVLGNHDYYSGDEE-NWIEALESAGITV-----LRNESVEISVGGATIGIAGVD----DGLGRRPDL 124 (223)
T ss_pred HHHhccCCCCCEEEECCCcccccCchH-HHHHHHHHcCCEE-----eecCcEEeccCCeEEEEEecc----CccccCCCH
Confidence 566666677999999999998643221 1012222211111 123345566665444443211 112233566
Q ss_pred HHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEEccccCceeEeeccccc---------
Q 008029 354 KEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYT--------- 424 (580)
Q Consensus 354 e~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR~~pv~n~~--------- 424 (580)
.+.+++.+ ...+.|++.|.|.+.. .+.+.++|++++||+|..+...|.....
T Consensus 125 ~~~~~~~~--~~~~~I~l~H~P~~~~-----------------~~~~~~~dl~l~GHtHggqi~~~~~~~~~~~~~~~~~ 185 (223)
T cd07385 125 EKALKGLD--EDDPNILLAHQPDTAE-----------------EAAAWGVDLQLSGHTHGGQIRLPGIGPLVLSKLARPY 185 (223)
T ss_pred HHHHhCCC--CCCCEEEEecCCChhH-----------------HhcccCccEEEeccCCCCEEeccccccccchhhcCcc
Confidence 66666643 3446899999984321 1256799999999999998776543220
Q ss_pred -----cCCCCcEEEEeCCCCc
Q 008029 425 -----LDACGPVYITVGDGGN 440 (580)
Q Consensus 425 -----~~~~G~vyIv~G~gG~ 440 (580)
...+..+||..|.|..
T Consensus 186 ~~G~~~~~~~~~~Vs~G~G~~ 206 (223)
T cd07385 186 DYGLYRKGGSQLYVSRGLGTW 206 (223)
T ss_pred cceEEEECCEEEEEcCCccCC
Confidence 0133467777776664
|
YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia |
| >cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.4e-13 Score=128.69 Aligned_cols=145 Identities=20% Similarity=0.282 Sum_probs=89.7
Q ss_pred EEEEcccCCCCChHHHH--HHHHHCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHHHhhhhh
Q 008029 202 IAVIGDLGLTSNSSTTV--DHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRFMEPL 279 (580)
Q Consensus 202 fav~gD~g~~~~~~~~l--~~i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~~~l~~l 279 (580)
|+++||+|......... +.+.+.++|+++++||+++.. . ...+.. .....
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~-------~------------------~~~~~~---~~~~~ 52 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLT-------D------------------APRFAP---LLLAL 52 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCc-------c------------------hHHHHH---HHHhh
Confidence 57899999875433221 223456899999999999531 1 011211 22233
Q ss_pred ccCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCCCCCCCcceEEEEeCcEEEEEEcCcccCCC-cHHHHHHHHHHHH
Q 008029 280 TSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYVDYNS-TGAQYAWLKEDLH 358 (580)
Q Consensus 280 ~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsfd~G~v~fI~Ldt~~~~~~-~~~Q~~WLe~~L~ 358 (580)
....|+++++||||+. +.|+....+.++.. ..++.+|+.++++
T Consensus 53 ~~~~~v~~v~GNHD~~------------------------------------~~~~G~~~w~~~~~~~~~~~~~~~~d~~ 96 (166)
T cd07404 53 KGFEPVIYVPGNHEFY------------------------------------VRIIGTTLWSDISLFGEAAARMRMNDFR 96 (166)
T ss_pred cCCccEEEeCCCcceE------------------------------------EEEEeeecccccCccchHHHHhCCCCCC
Confidence 4578999999999973 23333332333222 3355666666554
Q ss_pred hccCCCCCeEEEEeCCCCccCCCCC-c--c-hhHHHHHHHHHHHHhcCCcEEEEccccCceeE
Q 008029 359 KLDRTVTPWLAAAWHPPWYNSYSSH-Y--Q-EFECMRQEMEALLYQYGVDIVFSGHVHAYERM 417 (580)
Q Consensus 359 ~~~r~~~pwvIv~~H~P~y~s~~~~-~--~-~~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR~ 417 (580)
..+|+++|+|+....... . . .....++.+..++++++|+++++||+|.....
T Consensus 97 -------~~~vv~~HhpP~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~i~GH~H~~~~~ 152 (166)
T cd07404 97 -------GKTVVVTHHAPSPLSLAPQYGDSLVNAAFAVDLDDLILADPIDLWIHGHTHFNFDY 152 (166)
T ss_pred -------CCEEEEeCCCCCccccCccccCCCcchhhhhccHhHHhhcCCCEEEECCccccceE
Confidence 237888888887654221 1 1 11234566778888999999999999986443
|
MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t |
| >cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.43 E-value=7.8e-12 Score=123.95 Aligned_cols=173 Identities=13% Similarity=0.148 Sum_probs=103.1
Q ss_pred CeEEEEEcccCCCCCh-HHHHHHHHHCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHHHhhh
Q 008029 199 PHRIAVIGDLGLTSNS-STTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRFME 277 (580)
Q Consensus 199 ~~rfav~gD~g~~~~~-~~~l~~i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~~~l~ 277 (580)
+.||++++|+|..... .+.++.+.+.++|+|+++||+++... . . .....+.+.++
T Consensus 4 ~~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~------~--------------~----~~~~~~l~~l~ 59 (224)
T cd07388 4 VRYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAA------K--------------S----EDYAAFFRILG 59 (224)
T ss_pred eeEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCC------C--------------H----HHHHHHHHHHH
Confidence 6799999999975332 23344444578999999999996310 0 0 11223333343
Q ss_pred hhccCCCeEEecCCCCCCCCcccccHHHHHhhcC----CCCCCCCCCCcceEEEEe-CcEEEEEEcCcccC--CCcHHHH
Q 008029 278 PLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFA----VPSEESGSNSNFYYSFNA-GGVHFIMLGAYVDY--NSTGAQY 350 (580)
Q Consensus 278 ~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~----~P~~~~~~~~~~yYsfd~-G~v~fI~Ldt~~~~--~~~~~Q~ 350 (580)
.+ .+|+++++||||.. ........|. +|..- ..... ...+ |+++|+.|+....+ ..+++|.
T Consensus 60 ~l--~~pv~~V~GNhD~~------v~~~l~~~~~~~~~~p~~~--~lh~~--~~~~~g~~~~~GlGGs~~~~~e~sE~e~ 127 (224)
T cd07388 60 EA--HLPTFYVPGPQDAP------LWEYLREAYNAELVHPEIR--NVHET--FAFWRGPYLVAGVGGEIADEGEPEEHEA 127 (224)
T ss_pred hc--CCceEEEcCCCChH------HHHHHHHHhcccccCccce--ecCCC--eEEecCCeEEEEecCCcCCCCCcCHHHH
Confidence 33 58999999999952 0111111221 12210 01111 2334 56999999975433 2345552
Q ss_pred ----HHHHH-HHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEEcccc
Q 008029 351 ----AWLKE-DLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVH 412 (580)
Q Consensus 351 ----~WLe~-~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H 412 (580)
+||.+ .|+...+......|+++|+|+|.....+.. ...+..++++++..++++||+|
T Consensus 128 ~~~~~~~~~~~l~~~~~~~~~~~VLv~H~PP~g~g~~h~G-----S~alr~~I~~~~P~l~i~GHih 189 (224)
T cd07388 128 LRYPAWVAEYRLKALWELKDYRKVFLFHTPPYHKGLNEQG-----SHEVAHLIKTHNPLVVLVGGKG 189 (224)
T ss_pred hhhhhhHHHHHHHHHHhCCCCCeEEEECCCCCCCCCCccC-----HHHHHHHHHHhCCCEEEEcCCc
Confidence 56533 222221112345899999999987432322 3577789999999999999999
|
This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets, |
| >cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.6e-12 Score=128.22 Aligned_cols=185 Identities=18% Similarity=0.175 Sum_probs=105.7
Q ss_pred EEEEEcccCCCCCh----------------HHHHHHHHHCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccc
Q 008029 201 RIAVIGDLGLTSNS----------------STTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRET 264 (580)
Q Consensus 201 rfav~gD~g~~~~~----------------~~~l~~i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~ 264 (580)
||++++|+|.+... .++++.+.+.+||+|+++||+++.... .
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~--~-------------------- 58 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNP--S-------------------- 58 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCC--C--------------------
Confidence 68999999987431 234445556799999999999864210 0
Q ss_pred cHHHHHHHHHhhhhhc-cCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCC--CCCCCCcceEEEEeCcEEEEEEcCcc
Q 008029 265 YQPRWDGWGRFMEPLT-SRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSE--ESGSNSNFYYSFNAGGVHFIMLGAYV 341 (580)
Q Consensus 265 y~~~wd~~~~~l~~l~-~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~--~~~~~~~~yYsfd~G~v~fI~Ldt~~ 341 (580)
...+..+.+.++.+. ..+|+++++||||....... .........+... ...........++.+++.|+.++...
T Consensus 59 -~~~~~~~~~~~~~~~~~~~~v~~~~GNHD~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~g~~~~~ 135 (223)
T cd00840 59 -PEALELLIEALRRLKEAGIPVFIIAGNHDSPSRLGA--LSPLLALSGLHLVGVEEDVLTPLLLPKGGTGVAIYGLPYLR 135 (223)
T ss_pred -HHHHHHHHHHHHHHHHCCCCEEEecCCCCCcccccc--ccchHhhCcEEEEcccCcceeEEEeccCCeEEEEEECCCCC
Confidence 123455566666654 57999999999998643221 1111111110000 00001112233444568888887432
Q ss_pred cCCCcHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEEccccCceeE
Q 008029 342 DYNSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERM 417 (580)
Q Consensus 342 ~~~~~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR~ 417 (580)
. .....+.+++++.+.+.. .....|++.|.|+.......... .......+...++|++++||.|..+..
T Consensus 136 ~-~~~~~~~~~~~~~~~~~~--~~~~~Il~~H~~~~~~~~~~~~~----~~~~~~~~~~~~~d~v~~GH~H~~~~~ 204 (223)
T cd00840 136 R-SRLRDLLADAELRPRPLD--PDDFNILLLHGGVAGAGPSDSER----APFVPEALLPAGFDYVALGHIHRPQII 204 (223)
T ss_pred H-HHHHHHHHHHHHHhhccC--CCCcEEEEEeeeeecCCCCcccc----cccCcHhhcCcCCCEEECCCcccCeee
Confidence 1 112334455555555543 34568999999976543221110 123344566789999999999987543
|
Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi |
| >TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family | Back alignment and domain information |
|---|
Probab=99.41 E-value=8e-12 Score=132.82 Aligned_cols=92 Identities=21% Similarity=0.236 Sum_probs=66.9
Q ss_pred cceEEEE-eCcE--EEEEEcCccc-----------CCCcHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCC---c
Q 008029 322 NFYYSFN-AGGV--HFIMLGAYVD-----------YNSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSH---Y 384 (580)
Q Consensus 322 ~~yYsfd-~G~v--~fI~Ldt~~~-----------~~~~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~---~ 384 (580)
..||+|+ .|++ |+|+||+... .....+|++||+++|+++.. +.+++|+++|+|+.+..... +
T Consensus 292 ~~yYsFd~~g~vplrvIvLDSt~~~~~~s~pG~~~G~Ld~eQLaWLe~~La~a~a-~~p~VVV~hHpPi~t~gi~~md~w 370 (492)
T TIGR03768 292 FACYSFVPKSDVPLKVIVLDDTQSEHDGSHDIHGHGSLDAKRWDWLKAELARGQA-DGQLMIIAAHIPIAVSPIGSEMEW 370 (492)
T ss_pred cceeEEecCCCcceEEEEECCCccccccCCCCCcceeeCHHHHHHHHHHHHhCcC-CCceEEEEeCCCcccCCccchhhh
Confidence 4599999 5855 9999998641 12469999999999999753 45789999999987632111 1
Q ss_pred c----------hhHHHHHHHHHHHHhc-CCcEEEEccccCc
Q 008029 385 Q----------EFECMRQEMEALLYQY-GVDIVFSGHVHAY 414 (580)
Q Consensus 385 ~----------~~~~~r~~l~~Ll~ky-~VdlvlsGH~H~y 414 (580)
. .....-.+|..+|.+| +|.++||||.|.-
T Consensus 371 ~~~~~~~~~~L~n~~~~~eLlaLL~~hPnVla~LsGHvHrn 411 (492)
T TIGR03768 371 WLGAADANPDLQNAVSLTGLVTTLQKYPNLLMWIAGHRHLN 411 (492)
T ss_pred ccccccccccccccccHHHHHHHHhcCCCeEEEEcCCcccc
Confidence 1 0001124799999999 6999999999963
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes. |
| >KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.40 E-value=3.2e-11 Score=122.55 Aligned_cols=210 Identities=19% Similarity=0.320 Sum_probs=119.1
Q ss_pred CCeEEEEEcccCCCCC--------------------hHHHHHHHH-HCCCCEEEEcccccccccccccCCCCCcccccCC
Q 008029 198 YPHRIAVIGDLGLTSN--------------------SSTTVDHLI-QNDPSLILMVGDLTYANQYLTTGGKAASCYSCAF 256 (580)
Q Consensus 198 ~~~rfav~gD~g~~~~--------------------~~~~l~~i~-~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~ 256 (580)
.+|||+.++|+|.+.. ....+++++ .++||||+++||++++..-
T Consensus 52 g~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g~~t--------------- 116 (379)
T KOG1432|consen 52 GTFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFGHST--------------- 116 (379)
T ss_pred CceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCccccccc---------------
Confidence 3799999999998743 123455554 4799999999999976210
Q ss_pred CCCccccccHHHHHHHHHhhhhh-ccCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCCC--CC-CCcceEEEEeCc-
Q 008029 257 PDAPIRETYQPRWDGWGRFMEPL-TSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEES--GS-NSNFYYSFNAGG- 331 (580)
Q Consensus 257 ~~~p~~e~y~~~wd~~~~~l~~l-~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~--~~-~~~~yYsfd~G~- 331 (580)
..++ ..+.+.++|. ..++||.++.||||-+..........+... +|..-+ .+ .+..+--..+|+
T Consensus 117 ------~Da~---~sl~kAvaP~I~~~IPwA~~lGNHDdes~ltr~ql~~~i~~--lP~s~~~v~p~dg~~~~~~g~gny 185 (379)
T KOG1432|consen 117 ------QDAA---TSLMKAVAPAIDRKIPWAAVLGNHDDESDLTRLQLMKFISK--LPYSLSQVNPPDGHMYIIDGFGNY 185 (379)
T ss_pred ------HhHH---HHHHHHhhhHhhcCCCeEEEecccccccccCHHHHHHHHhc--CCCccccCCCcccceeeeecccce
Confidence 1122 3345566664 479999999999998755443333333332 222111 01 111111111221
Q ss_pred -----------------EEEEEEcCcccC----------CCcHHHHHHHHHHHHh---ccCCCCC-eEEEEeCCCCc--c
Q 008029 332 -----------------VHFIMLGAYVDY----------NSTGAQYAWLKEDLHK---LDRTVTP-WLAAAWHPPWY--N 378 (580)
Q Consensus 332 -----------------v~fI~Ldt~~~~----------~~~~~Q~~WLe~~L~~---~~r~~~p-wvIv~~H~P~y--~ 378 (580)
..+++||+..+. .....|.+||+..-.+ .+..-.| --++++|.|+- .
T Consensus 186 n~~i~~~~ds~~~~~sv~~lyfld~~~~~s~~~~~~~Ydwik~sq~~wl~~~~~~~~~~~~~~~P~p~La~~HIP~~E~~ 265 (379)
T KOG1432|consen 186 NLQIEGAIDSELENKSVFNLYFLDSSSYTSVPPLLPGYDWIKESQLEWLSDTSKEFKEPNSKYNPQPGLAFFHIPLPEFL 265 (379)
T ss_pred EEEeccCCCcccccCceeeEEEEecCCcccccccccCccchhhhhHHHHhhhhhhhhcccCccCCCCceEEEEcccHHHh
Confidence 124455543221 2368899999988733 1222233 46888999863 2
Q ss_pred CCCC------Ccchh---HHHHHHHHHHHH-hcCCcEEEEccccCceeEeeccccccCCCCcEEEEeCCCCc
Q 008029 379 SYSS------HYQEF---ECMRQEMEALLY-QYGVDIVFSGHVHAYERMNRVYNYTLDACGPVYITVGDGGN 440 (580)
Q Consensus 379 s~~~------~~~~~---~~~r~~l~~Ll~-ky~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyIv~G~gG~ 440 (580)
.... ..++. ......+...|. ..+|+.|++||+|...--.+. .|.+++.=|+|+.
T Consensus 266 ~~~~~tp~~g~~~E~~~~~~~~sg~~~~L~~r~~Vk~vf~GHdHvNDfC~~~-------k~~~wlCygGgaG 330 (379)
T KOG1432|consen 266 ELESKTPLIGVFQEGVSASKHNSGFLTTLVNRGNVKGVFCGHDHVNDFCGEL-------KGELWLCYGGGAG 330 (379)
T ss_pred hccCCCcccceeeccccccccccHHHHHHHhccCcceEEeccccccceeccc-------CCeEEEEecCCCc
Confidence 2111 11111 111235666666 679999999999986655432 3446666665544
|
|
| >PRK11340 phosphodiesterase YaeI; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=4.6e-12 Score=129.70 Aligned_cols=164 Identities=16% Similarity=0.183 Sum_probs=97.5
Q ss_pred CeEEEEEcccCCCCC-----hHHHHHHHHHCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHH
Q 008029 199 PHRIAVIGDLGLTSN-----SSTTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWG 273 (580)
Q Consensus 199 ~~rfav~gD~g~~~~-----~~~~l~~i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~ 273 (580)
++||++++|+|.... ..+.++.+.+.+||+|+++||+++.+. . ..++.+.
T Consensus 49 ~~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~---~----------------------~~~~~~~ 103 (271)
T PRK11340 49 PFKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDM---P----------------------LNFSAFS 103 (271)
T ss_pred CcEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCc---c----------------------ccHHHHH
Confidence 699999999998632 234555666789999999999985210 0 1234566
Q ss_pred HhhhhhccCCCeEEecCCCCCCCCccc-ccHHHHHhhcCCCCCCCCCCCcceEEEEeCc--EEEEEEcCcccCCCcHHHH
Q 008029 274 RFMEPLTSRVPMMVIEGNHEIEPQVAG-ITFKSYLTRFAVPSEESGSNSNFYYSFNAGG--VHFIMLGAYVDYNSTGAQY 350 (580)
Q Consensus 274 ~~l~~l~~~vP~~~v~GNHD~~~~~~~-~~f~~y~~~f~~P~~~~~~~~~~yYsfd~G~--v~fI~Ldt~~~~~~~~~Q~ 350 (580)
+.++.+.+..|+++++||||+...... +.+....+.-.+. -..+....+..++ +.++.++-... +...
T Consensus 104 ~~L~~L~~~~pv~~V~GNHD~~~~~~~~~~~~~~l~~~gi~-----lL~n~~~~i~~~~~~i~i~G~~d~~~---~~~~- 174 (271)
T PRK11340 104 DVLSPLAECAPTFACFGNHDRPVGTEKNHLIGETLKSAGIT-----VLFNQATVIATPNRQFELVGTGDLWA---GQCK- 174 (271)
T ss_pred HHHHHHhhcCCEEEecCCCCcccCccchHHHHHHHHhcCcE-----EeeCCeEEEeeCCcEEEEEEecchhc---cCCC-
Confidence 677777767899999999998532111 1122222211110 0123345555543 56666653211 1100
Q ss_pred HHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEEccccCceeEeec
Q 008029 351 AWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRV 420 (580)
Q Consensus 351 ~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR~~pv 420 (580)
..+.++ ++ ...|++.|.|-+- +.+.+.++|++||||+|.-|-..|.
T Consensus 175 --~~~~~~----~~-~~~IlL~H~P~~~-----------------~~~~~~~~dL~lsGHTHGGQi~lP~ 220 (271)
T PRK11340 175 --PPPASE----AN-LPRLVLAHNPDSK-----------------EVMRDEPWDLMLCGHTHGGQLRVPL 220 (271)
T ss_pred --hhHhcC----CC-CCeEEEEcCCChh-----------------HhhccCCCCEEEeccccCCeEEccc
Confidence 111121 12 3488999999431 1234678999999999998877664
|
|
| >cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.27 E-value=3.7e-11 Score=106.65 Aligned_cols=116 Identities=29% Similarity=0.413 Sum_probs=81.9
Q ss_pred EEEcccCCCCChHHHH---HHHHHCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHHHhhhhh
Q 008029 203 AVIGDLGLTSNSSTTV---DHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRFMEPL 279 (580)
Q Consensus 203 av~gD~g~~~~~~~~l---~~i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~~~l~~l 279 (580)
+++||+|......... ....+.++|+|+++||+++.... ..+..+.......
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~-------------------------~~~~~~~~~~~~~ 55 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPD-------------------------PEEVLAAALALLL 55 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCC-------------------------chHHHHHHHHHhh
Confidence 3689999886544332 34456799999999999975211 1122222133334
Q ss_pred ccCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCCCCCCCcceEEEEeCcEEEEEEcCcccCCCcHHHHHHHHHHHHh
Q 008029 280 TSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYVDYNSTGAQYAWLKEDLHK 359 (580)
Q Consensus 280 ~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsfd~G~v~fI~Ldt~~~~~~~~~Q~~WLe~~L~~ 359 (580)
....|+++++||||
T Consensus 56 ~~~~~~~~~~GNHD------------------------------------------------------------------ 69 (131)
T cd00838 56 LLGIPVYVVPGNHD------------------------------------------------------------------ 69 (131)
T ss_pred cCCCCEEEeCCCce------------------------------------------------------------------
Confidence 56899999999999
Q ss_pred ccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEEccccCceeEe
Q 008029 360 LDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMN 418 (580)
Q Consensus 360 ~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR~~ 418 (580)
|++.|.|++.............+..+..++.+++++++|+||.|.+.+..
T Consensus 70 ---------i~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 70 ---------ILLTHGPPYDPLDELSPDEDPGSEALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred ---------EEEeccCCCCCchhhcccchhhHHHHHHHHHHhCCCEEEeCCeecccccc
Confidence 89999998776433222222257788999999999999999999998874
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me |
| >cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.21 E-value=2.1e-10 Score=114.07 Aligned_cols=178 Identities=23% Similarity=0.287 Sum_probs=112.1
Q ss_pred EEEEEcccCCCCChHHHHHHHH----HCCCCEEEEcccccccccccccCCCCCc--ccccCCCCCccccccHHHHHHHH-
Q 008029 201 RIAVIGDLGLTSNSSTTVDHLI----QNDPSLILMVGDLTYANQYLTTGGKAAS--CYSCAFPDAPIRETYQPRWDGWG- 273 (580)
Q Consensus 201 rfav~gD~g~~~~~~~~l~~i~----~~~pDfvl~~GDl~Y~d~~~~~GG~~~~--c~~~~~~~~p~~e~y~~~wd~~~- 273 (580)
||++.++.+...........+. +.+||++|++||.+|++...... .... --..........+.|+.++..+.
T Consensus 1 r~a~~SC~~~~~~~~~~~~~~~~~~~~~~~d~~l~~GD~IY~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~Y~~~~~ 79 (228)
T cd07389 1 RFAFGSCNKYESGYFNAYRALAYDHSEEDPDLFLHLGDQIYADDVGGLM-PALIEGRPLEPAHEALTLEEYRERYRQYRS 79 (228)
T ss_pred CEEEEECCCCCCCCcHHHHHHhhhccccCCCEEEEcCCeecccCCCccc-ccccCCcCcCCcccccCHHHHHHHHHHHcC
Confidence 4778888777655555555554 78999999999999997421100 0000 00000001123445555565552
Q ss_pred -HhhhhhccCCCeEEecCCCCCCCCccc----------------ccHHHHHhhcCCCCCCCC--CCCcceEEEEeCcE-E
Q 008029 274 -RFMEPLTSRVPMMVIEGNHEIEPQVAG----------------ITFKSYLTRFAVPSEESG--SNSNFYYSFNAGGV-H 333 (580)
Q Consensus 274 -~~l~~l~~~vP~~~v~GNHD~~~~~~~----------------~~f~~y~~~f~~P~~~~~--~~~~~yYsfd~G~v-~ 333 (580)
..++.+.+.+|++.++.+||+..+... .....|......+..... .....|++|.+|.. .
T Consensus 80 ~p~~~~~~~~~p~~~iwDDHDi~~n~~~~~~~~~~~~~~~~~~~~a~~ay~e~~~~~~~~~~~~~~~~~y~~~~~G~~~~ 159 (228)
T cd07389 80 DPDLQRLLAQVPTIGIWDDHDIGDNWGGDGAWVQDSPVFYARKAAARQAYLEFQPVRNPSPRRGGRGGIYRSFRFGDLVD 159 (228)
T ss_pred CHHHHHHhhcCCEEEeccccccccccccccccccCcchHHHHHHHHHHHHHHHcCCCCCCccCCCCceEEEEEecCCcce
Confidence 346677789999999999999876543 112345555544443322 34678999999986 9
Q ss_pred EEEEcCcccCCCcHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCC--cEEEEccc
Q 008029 334 FIMLGAYVDYNSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGV--DIVFSGHV 411 (580)
Q Consensus 334 fI~Ldt~~~~~~~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~V--dlvlsGH~ 411 (580)
|++||++... ..|......|+.+..++.+.++ -++|||++
T Consensus 160 ~~~lD~R~~R--------------------------------------d~W~~~~~er~~l~~~~~~~~~~~vv~lSGDv 201 (228)
T cd07389 160 LILLDTRTYR--------------------------------------DSWDGYPAERERLLDLLAKRKIKNVVFLSGDV 201 (228)
T ss_pred EEEEeccccc--------------------------------------ccccccHHHHHHHHHHHHHhCCCCeEEEecHH
Confidence 9999998754 2333444567788777666543 48899999
Q ss_pred cCceeE
Q 008029 412 HAYERM 417 (580)
Q Consensus 412 H~yeR~ 417 (580)
|..+-.
T Consensus 202 H~~~~~ 207 (228)
T cd07389 202 HLAEAS 207 (228)
T ss_pred HHHHHh
Confidence 975443
|
PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF |
| >PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [] | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.5e-10 Score=107.49 Aligned_cols=137 Identities=23% Similarity=0.371 Sum_probs=81.2
Q ss_pred eEEEEEcccCCCCCh-HHHHHHHHHCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHHHhhhh
Q 008029 200 HRIAVIGDLGLTSNS-STTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRFMEP 278 (580)
Q Consensus 200 ~rfav~gD~g~~~~~-~~~l~~i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~~~l~~ 278 (580)
|||+++||+|..... .+.++.+ +++|+|+++||++.. .++.+.++.
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~-------------------------------~~~~~~~~~ 47 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFDP-------------------------------EEVLELLRD 47 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCSH-------------------------------HHHHHHHHH
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchhH-------------------------------HHHHHHHhc
Confidence 699999999986432 3455555 579999999999731 223333433
Q ss_pred hccCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCCCCCCCcceEEEEeCcEEEEEEcCcccCCCcHHHHHHHHHHHH
Q 008029 279 LTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYVDYNSTGAQYAWLKEDLH 358 (580)
Q Consensus 279 l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsfd~G~v~fI~Ldt~~~~~~~~~Q~~WLe~~L~ 358 (580)
+ |++++.||||... +....... . +.
T Consensus 48 ~----~~~~v~GNHD~~~---------~~~~~~~~---------~---------------------------------~~ 72 (156)
T PF12850_consen 48 I----PVYVVRGNHDNWA---------FPNENDEE---------Y---------------------------------LL 72 (156)
T ss_dssp H----EEEEE--CCHSTH---------HHSEECTC---------S---------------------------------SH
T ss_pred C----CEEEEeCCccccc---------chhhhhcc---------c---------------------------------cc
Confidence 3 8999999999521 11111000 0 11
Q ss_pred h-ccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEEccccCceeEeeccccccCCCCcEEEEeCC
Q 008029 359 K-LDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDACGPVYITVGD 437 (580)
Q Consensus 359 ~-~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyIv~G~ 437 (580)
. ....-....|++.|...+.... ..+.+..++...+++++++||.|...... .+|+.++..|+
T Consensus 73 ~~~~~~~~~~~i~~~H~~~~~~~~--------~~~~~~~~~~~~~~~~~~~GH~H~~~~~~--------~~~~~~~~~Gs 136 (156)
T PF12850_consen 73 DALRLTIDGFKILLSHGHPYDVQW--------DPAELREILSRENVDLVLHGHTHRPQVFK--------IGGIHVINPGS 136 (156)
T ss_dssp SEEEEEETTEEEEEESSTSSSSTT--------THHHHHHHHHHTTSSEEEESSSSSEEEEE--------ETTEEEEEE-G
T ss_pred cceeeeecCCeEEEECCCCccccc--------ChhhhhhhhcccCCCEEEcCCcccceEEE--------ECCEEEEECCc
Confidence 1 0001123578888876655321 12346677889999999999999977753 45788888887
Q ss_pred CCc
Q 008029 438 GGN 440 (580)
Q Consensus 438 gG~ 440 (580)
.+.
T Consensus 137 ~~~ 139 (156)
T PF12850_consen 137 IGG 139 (156)
T ss_dssp SSS
T ss_pred CCC
Confidence 665
|
; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A .... |
| >cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.3e-09 Score=106.89 Aligned_cols=195 Identities=19% Similarity=0.180 Sum_probs=102.4
Q ss_pred eEEEEEcccCCCCChHHHHHHHHHCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHHHhhhhh
Q 008029 200 HRIAVIGDLGLTSNSSTTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRFMEPL 279 (580)
Q Consensus 200 ~rfav~gD~g~~~~~~~~l~~i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~~~l~~l 279 (580)
+||+++||+|..... ...+.+.+.+||+|+++||++... ..+.+.+..+
T Consensus 1 ~rIa~isDiHg~~~~-~~~~~l~~~~pD~Vl~~GDi~~~~------------------------------~~~~~~l~~l 49 (238)
T cd07397 1 LRIAIVGDVHGQWDL-EDIKALHLLQPDLVLFVGDFGNES------------------------------VQLVRAISSL 49 (238)
T ss_pred CEEEEEecCCCCchH-HHHHHHhccCCCEEEECCCCCcCh------------------------------HHHHHHHHhC
Confidence 589999999976443 234556667999999999998321 1122333333
Q ss_pred ccCCCeEEecCCCCCCCCccc-ccHHHHHhhcCCCCCCCCCCCcceEE---EEeCcEEEEEEcCccc-------------
Q 008029 280 TSRVPMMVIEGNHEIEPQVAG-ITFKSYLTRFAVPSEESGSNSNFYYS---FNAGGVHFIMLGAYVD------------- 342 (580)
Q Consensus 280 ~~~vP~~~v~GNHD~~~~~~~-~~f~~y~~~f~~P~~~~~~~~~~yYs---fd~G~v~fI~Ldt~~~------------- 342 (580)
..|+++++||||....... ..+..+......... .... .++....+.++.++..
T Consensus 50 --~~p~~~V~GNHD~~~~~~~~~k~~~l~~~L~~lg~-------~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~v 120 (238)
T cd07397 50 --PLPKAVILGNHDAWYDATFRKKGDRVQEQLELLGD-------LHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAV 120 (238)
T ss_pred --CCCeEEEcCCCcccccccccchHHHHHHHHHHhCC-------cEEeecccccCCCCeEEEeeCCccCCCccccCHHHH
Confidence 4799999999998643211 022233333221111 1111 1111112222222110
Q ss_pred ---C--CCcHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCC-------------CcchhHHHHHHHHHHHHhcCCc
Q 008029 343 ---Y--NSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSS-------------HYQEFECMRQEMEALLYQYGVD 404 (580)
Q Consensus 343 ---~--~~~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~-------------~~~~~~~~r~~l~~Ll~ky~Vd 404 (580)
| ....+-.+.+-+.++.++.. .+ .|++.|.++....+. .......+++++..+-..-.++
T Consensus 121 r~~fgi~s~~eA~~~ive~~~~~~~~-~~-~VliaH~~~~G~g~~~~~~cg~d~~~~~~~~G~~~l~~ai~~~~~~~~~~ 198 (238)
T cd07397 121 KAVYGVISLEESAQRIIAAAKKAPPD-LP-LILLAHNGPSGLGSDAEDPCGRDWKPPGGDWGDPDLALAISQIQQGRQVP 198 (238)
T ss_pred HHHhCCCCHHHHHHHHHHHhhhcCCC-CC-eEEEeCcCCcCCCcccccccccccCCcCCCCCCHHHHHHHHHHhccCCCC
Confidence 1 11233344444444333322 23 788899988655311 0112345666776555344589
Q ss_pred EEEEccccCceeEeeccc--cccCCCCcEEEEeC
Q 008029 405 IVFSGHVHAYERMNRVYN--YTLDACGPVYITVG 436 (580)
Q Consensus 405 lvlsGH~H~yeR~~pv~n--~~~~~~G~vyIv~G 436 (580)
++++||+|.--|...-.. ...+..|++|+...
T Consensus 199 l~~fGH~H~~l~~~~~~r~~~~~~~~gt~y~N~a 232 (238)
T cd07397 199 LVVFGHMHHRLRRGKGLRNMIAVDREGTVYLNAA 232 (238)
T ss_pred EEEeCCccCcccccccccceeeecCCCeEEEecc
Confidence 999999997533221000 11366899998543
|
DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy |
| >cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.11 E-value=5.1e-10 Score=102.33 Aligned_cols=117 Identities=18% Similarity=0.192 Sum_probs=74.3
Q ss_pred EEEEEcccCCCCChHHHHHHHHHCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHHHhhhhhc
Q 008029 201 RIAVIGDLGLTSNSSTTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRFMEPLT 280 (580)
Q Consensus 201 rfav~gD~g~~~~~~~~l~~i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~~~l~~l~ 280 (580)
||+++||+|.... .+...++|+++++||+++.. . ...++.+.+.++.+.
T Consensus 1 ~i~~isD~H~~~~------~~~~~~~D~vi~~GD~~~~~-------~------------------~~~~~~~~~~l~~~~ 49 (135)
T cd07379 1 RFVCISDTHSRHR------TISIPDGDVLIHAGDLTERG-------T------------------LEELQKFLDWLKSLP 49 (135)
T ss_pred CEEEEeCCCCCCC------cCcCCCCCEEEECCCCCCCC-------C------------------HHHHHHHHHHHHhCC
Confidence 5899999998754 23346899999999998531 1 112334445555442
Q ss_pred cCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCCCCCCCcceEEEEeCcEEEEEEcCcccCCCcHHHHHHHHHHHHhc
Q 008029 281 SRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYVDYNSTGAQYAWLKEDLHKL 360 (580)
Q Consensus 281 ~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsfd~G~v~fI~Ldt~~~~~~~~~Q~~WLe~~L~~~ 360 (580)
..++++++||||.... .
T Consensus 50 -~~~~~~v~GNHD~~~~--------------------------------------------------------------~ 66 (135)
T cd07379 50 -HPHKIVIAGNHDLTLD--------------------------------------------------------------P 66 (135)
T ss_pred -CCeEEEEECCCCCcCC--------------------------------------------------------------C
Confidence 1235789999996310 0
Q ss_pred cCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEEccccCce
Q 008029 361 DRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYE 415 (580)
Q Consensus 361 ~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~ye 415 (580)
..+.|++.|.|++............-...+.+++.+++++++++||+|...
T Consensus 67 ----~~~~ilv~H~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~ 117 (135)
T cd07379 67 ----EDTDILVTHGPPYGHLDLVSSGQRVGCEELLNRVQRVRPKLHVFGHIHEGY 117 (135)
T ss_pred ----CCCEEEEECCCCCcCccccccCcccCCHHHHHHHHHHCCcEEEEcCcCCcC
Confidence 123688889988765422111011112456777888999999999999864
|
239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme |
| >COG1408 Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.1e-09 Score=112.47 Aligned_cols=174 Identities=21% Similarity=0.263 Sum_probs=100.3
Q ss_pred CCeEEEEEcccCCCCCh---HHHHHHHHHCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHHH
Q 008029 198 YPHRIAVIGDLGLTSNS---STTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGR 274 (580)
Q Consensus 198 ~~~rfav~gD~g~~~~~---~~~l~~i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~~ 274 (580)
..++|+.++|+|..... .+.+.++....||+|+++||+++.+. . +.+..+.+
T Consensus 43 ~~~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~~------~-------------------~~~~~~~~ 97 (284)
T COG1408 43 QGLKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDR------P-------------------PGVAALAL 97 (284)
T ss_pred CCeEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCCC------C-------------------CCHHHHHH
Confidence 36899999999997655 34455566678999999999996410 0 23466778
Q ss_pred hhhhhccCCCeEEecCCCCCCCCcccccHHHHHhhc--CCCCCCCCCCCcceEEEEeCcEEEEEEcCcccCCCcHHHHHH
Q 008029 275 FMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRF--AVPSEESGSNSNFYYSFNAGGVHFIMLGAYVDYNSTGAQYAW 352 (580)
Q Consensus 275 ~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f--~~P~~~~~~~~~~yYsfd~G~v~fI~Ldt~~~~~~~~~Q~~W 352 (580)
.+++|.+..+++++.||||+.....+.......+.. ..-.++........-.++.++.++. +..-+++..-
T Consensus 98 ~L~~L~~~~gv~av~GNHd~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~d~~~~ 170 (284)
T COG1408 98 FLAKLKAPLGVFAVLGNHDYGVDRSNVYIGDLLEELGRVVLRNEIAVIDLLALRIEVGGLDLY-------LAGVEDILAG 170 (284)
T ss_pred HHHhhhccCCEEEEecccccccccccchhhhhhhhcceeeecccchhcccccccccccccccc-------cccCchHHhh
Confidence 888999999999999999997554332111111111 0000000000000000222221111 0111222222
Q ss_pred -----------HHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEEccccCceeEeecc
Q 008029 353 -----------LKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVY 421 (580)
Q Consensus 353 -----------Le~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR~~pv~ 421 (580)
+.+.+.+.+ .....|++.|.|-.- ..+.+++||++||||+|.-|-..|.+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~--~~~~~IlL~H~P~~~-----------------~~~~~~~~dLvLSGHTHGGQi~~p~~ 231 (284)
T COG1408 171 LPLAPFTIGLDIAEALKQLD--EDLPGILLSHEPDII-----------------LQLRLYGVDLVLSGHTHGGQIRLPLW 231 (284)
T ss_pred Ccccccccccchhhhhcccc--ccccceEeccCCcee-----------------hhhccCcceEEEeccccCCeEEeecc
Confidence 224444443 233589999999322 23556799999999999988887654
Q ss_pred c
Q 008029 422 N 422 (580)
Q Consensus 422 n 422 (580)
.
T Consensus 232 ~ 232 (284)
T COG1408 232 G 232 (284)
T ss_pred c
Confidence 3
|
|
| >PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=2.9e-09 Score=107.12 Aligned_cols=198 Identities=17% Similarity=0.228 Sum_probs=105.0
Q ss_pred eEEEEEcccCCCCChHH----HHHHHH--HCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHH
Q 008029 200 HRIAVIGDLGLTSNSST----TVDHLI--QNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWG 273 (580)
Q Consensus 200 ~rfav~gD~g~~~~~~~----~l~~i~--~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~ 273 (580)
+|+++++|+|.+..... .++.+. +.+||+|+++||+++. +.. . + . ..+......
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~~~~~d~l~i~GDl~d~--~~g---~--~---------~----~~~~~~~~~ 60 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGEARQADALYILGDLFEA--WIG---D--D---------D----PSPFAREIA 60 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhhhccCCEEEEccceecc--ccc---c--C---------c----CCHHHHHHH
Confidence 58999999998754322 333332 3589999999999953 110 0 0 0 001123344
Q ss_pred Hhhhhhcc-CCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCCCCCCCcceEEEEeCcEEEEEEcCcccCCCcHHHHHH
Q 008029 274 RFMEPLTS-RVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYVDYNSTGAQYAW 352 (580)
Q Consensus 274 ~~l~~l~~-~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsfd~G~v~fI~Ldt~~~~~~~~~Q~~W 352 (580)
+.++.+.. .+|++.++||||.... ..+.....+.. -.....++.++.+++..-.... ...+..+++
T Consensus 61 ~~l~~l~~~g~~v~~v~GNHD~~~~------~~~~~~~g~~~------l~~~~~~~~~g~~i~l~HGd~~-~~~d~~y~~ 127 (241)
T PRK05340 61 AALKALSDSGVPCYFMHGNRDFLLG------KRFAKAAGMTL------LPDPSVIDLYGQRVLLLHGDTL-CTDDKAYQR 127 (241)
T ss_pred HHHHHHHHcCCeEEEEeCCCchhhh------HHHHHhCCCEE------eCCcEEEEECCEEEEEECCccc-ccCCHHHHH
Confidence 55565553 4899999999997421 12222222110 0112456777777776654322 123455555
Q ss_pred HHHHHHhccCCCCCeEEEEeCCCCccCCCC---------------Ccch-hHHHHHHHHHHHHhcCCcEEEEccccCcee
Q 008029 353 LKEDLHKLDRTVTPWLAAAWHPPWYNSYSS---------------HYQE-FECMRQEMEALLYQYGVDIVFSGHVHAYER 416 (580)
Q Consensus 353 Le~~L~~~~r~~~pwvIv~~H~P~y~s~~~---------------~~~~-~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR 416 (580)
+++.+.. ||....+|.+++..... .... .....+.+.+++.+++++++++||+|.-..
T Consensus 128 ~r~~~r~------~~~~~~~~~~p~~~~~~ia~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~ 201 (241)
T PRK05340 128 FRRKVRN------PWLQWLFLALPLSIRLRIAAKMRAKSKAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAI 201 (241)
T ss_pred HHHHHhC------HHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCcce
Confidence 5554443 12222233332211000 0000 000124677889999999999999998654
Q ss_pred EeeccccccCCCCcEEEEeCCCCc
Q 008029 417 MNRVYNYTLDACGPVYITVGDGGN 440 (580)
Q Consensus 417 ~~pv~n~~~~~~G~vyIv~G~gG~ 440 (580)
.. +.+ +..+..|++.|+...
T Consensus 202 ~~-~~~---~~~~~~~~~lgdw~~ 221 (241)
T PRK05340 202 HQ-LQA---GGQPATRIVLGDWHE 221 (241)
T ss_pred ee-ccC---CCcceEEEEeCCCCC
Confidence 32 111 111246888888743
|
|
| >cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.93 E-value=5.3e-09 Score=101.15 Aligned_cols=39 Identities=21% Similarity=0.306 Sum_probs=31.5
Q ss_pred EEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEEccccCceeE
Q 008029 369 AAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERM 417 (580)
Q Consensus 369 Iv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR~ 417 (580)
|++.|.|+..... ..+..++.+++++++|+||.|.+...
T Consensus 112 i~lsH~P~~~~~~----------~~~~~~~~~~~p~~Ifs~H~H~s~~~ 150 (195)
T cd08166 112 IMLSHVPLLAEGG----------QALKHVVTDLDPDLIFSAHRHKSSIF 150 (195)
T ss_pred eeeeccccccccc----------HHHHHHHHhcCceEEEEcCccceeeE
Confidence 8999999766432 26677888999999999999987665
|
A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R |
| >cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.92 E-value=7.8e-09 Score=96.47 Aligned_cols=57 Identities=19% Similarity=0.140 Sum_probs=38.3
Q ss_pred eEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEEccccCceeEeeccccccCCCCcEEEEeCCCCc
Q 008029 367 WLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDACGPVYITVGDGGN 440 (580)
Q Consensus 367 wvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyIv~G~gG~ 440 (580)
+.|++.|.+....... . + . ..++.+.++|++++||+|...... .+++.++..|+.|.
T Consensus 76 ~~i~v~Hg~~~~~~~~----~---~-~-~~~~~~~~~d~vi~GHtH~~~~~~--------~~~~~~inpGs~~~ 132 (155)
T cd00841 76 KRIFLTHGHLYGVKNG----L---D-R-LYLAKEGGADVVLYGHTHIPVIEK--------IGGVLLLNPGSLSL 132 (155)
T ss_pred EEEEEECCcccccccc----h---h-h-hhhhhhcCCCEEEECcccCCccEE--------ECCEEEEeCCCccC
Confidence 3677888776543211 0 1 1 455677899999999999765432 35788888888775
|
YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph |
| >cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.5e-08 Score=96.67 Aligned_cols=32 Identities=28% Similarity=0.324 Sum_probs=26.0
Q ss_pred EEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEEccccCceeEe
Q 008029 369 AAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMN 418 (580)
Q Consensus 369 Iv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR~~ 418 (580)
|++.|.|.+. ++.+.+++++|+||+|.+-+..
T Consensus 119 i~l~H~p~~~------------------~~~~~~~~~~lsGH~H~~~~~~ 150 (171)
T cd07384 119 ILLTHIPLYR------------------LLDTIKPVLILSGHDHDQCEVV 150 (171)
T ss_pred eeEECCccHH------------------HHhccCceEEEeCcccCCeEEE
Confidence 8999998531 6677899999999999986654
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit |
| >cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.88 E-value=1e-08 Score=96.31 Aligned_cols=52 Identities=23% Similarity=0.553 Sum_probs=33.2
Q ss_pred HHCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHHHhhhhhc---cCCCeEEecCCCCCC
Q 008029 222 IQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRFMEPLT---SRVPMMVIEGNHEIE 295 (580)
Q Consensus 222 ~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~~~l~~l~---~~vP~~~v~GNHD~~ 295 (580)
.+.+||+|+++||+++..... . ...|..+...+..+. ..+|++.++||||..
T Consensus 35 ~~~~pd~vv~~GDl~~~~~~~---------------------~-~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 35 WLLQPDVVFVLGDLFDEGKWS---------------------T-DEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred HhcCCCEEEECCCCCCCCccC---------------------C-HHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 346999999999999642110 0 134544333333322 258999999999974
|
MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to |
| >TIGR00040 yfcE phosphoesterase, MJ0936 family | Back alignment and domain information |
|---|
Probab=98.85 E-value=3.7e-08 Score=92.49 Aligned_cols=37 Identities=27% Similarity=0.367 Sum_probs=27.7
Q ss_pred eEEEEEcccCCCCChHH-HHHHHHHC-CCCEEEEccccc
Q 008029 200 HRIAVIGDLGLTSNSST-TVDHLIQN-DPSLILMVGDLT 236 (580)
Q Consensus 200 ~rfav~gD~g~~~~~~~-~l~~i~~~-~pDfvl~~GDl~ 236 (580)
+||+++||+|......+ .++.+... ++|.|+++||++
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~ 39 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLT 39 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCC
Confidence 58999999997654433 33444455 899999999997
|
Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required. |
| >cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.82 E-value=3.5e-07 Score=87.92 Aligned_cols=40 Identities=35% Similarity=0.598 Sum_probs=29.8
Q ss_pred HHHHHHHhcCCcEEEEccccCceeEeeccccccCCCCcEEEEeCCCCc
Q 008029 393 EMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDACGPVYITVGDGGN 440 (580)
Q Consensus 393 ~l~~Ll~ky~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyIv~G~gG~ 440 (580)
.+..++.+.++|++++||+|...... .+|..++..|+.|.
T Consensus 97 ~~~~~~~~~~~dvii~GHTH~p~~~~--------~~g~~viNPGSv~~ 136 (178)
T cd07394 97 SLAALQRQLDVDILISGHTHKFEAFE--------HEGKFFINPGSATG 136 (178)
T ss_pred HHHHHHHhcCCCEEEECCCCcceEEE--------ECCEEEEECCCCCC
Confidence 44555667889999999999764432 35788898998774
|
Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl |
| >PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A | Back alignment and domain information |
|---|
Probab=98.80 E-value=9.1e-08 Score=92.98 Aligned_cols=194 Identities=21% Similarity=0.306 Sum_probs=91.6
Q ss_pred CeEEEEEcccCCCCCh-HHHHHHHHHCCCCEEEEcccccccccccccCCCCCcccc----cCCCCCc-cc--cccHH-HH
Q 008029 199 PHRIAVIGDLGLTSNS-STTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYS----CAFPDAP-IR--ETYQP-RW 269 (580)
Q Consensus 199 ~~rfav~gD~g~~~~~-~~~l~~i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~----~~~~~~p-~~--e~y~~-~w 269 (580)
+-|+++++|.+..... .+.+..+.+.+||+++++||+.-... .+.++.+ ...|+.+ +. +.|+. ..
T Consensus 5 ~~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a------~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~ 78 (255)
T PF14582_consen 5 VRKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEA------RSDEYERAQEEQREPDKSEINEEECYDSEAL 78 (255)
T ss_dssp --EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCH------HHHHHHHHHHTT----THHHHHHHHHHHHHH
T ss_pred chhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccch------hhhHHHHHhhhccCcchhhhhhhhhhhHHHH
Confidence 4589999999865332 34455556679999999999974321 1000000 0111110 00 11111 13
Q ss_pred HHHHHhhhhhccCCCeEEecCCCCCCCCcccccH--HHHHhhcCCCCCCCCCCCcceEEEEeCcEEEEEEcCcccC-CC-
Q 008029 270 DGWGRFMEPLTSRVPMMVIEGNHEIEPQVAGITF--KSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYVDY-NS- 345 (580)
Q Consensus 270 d~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f--~~y~~~f~~P~~~~~~~~~~yYsfd~G~v~fI~Ldt~~~~-~~- 345 (580)
+.+++.+..+ .+|.+++|||||... ..| .+|....-.|.-- . -..-+.+.-|...++.+..+... ..
T Consensus 79 ~~ff~~L~~~--~~p~~~vPG~~Dap~----~~~lr~a~~~e~v~p~~~-~--vH~sf~~~~g~y~v~G~GGeI~~~~~~ 149 (255)
T PF14582_consen 79 DKFFRILGEL--GVPVFVVPGNMDAPE----RFFLREAYNAEIVTPHIH-N--VHESFFFWKGEYLVAGMGGEITDDQRE 149 (255)
T ss_dssp HHHHHHHHCC---SEEEEE--TTS-SH----HHHHHHHHHCCCC-TTEE-E---CTCEEEETTTEEEEEE-SEEESSS-B
T ss_pred HHHHHHHHhc--CCcEEEecCCCCchH----HHHHHHHhccceecccee-e--eeeeecccCCcEEEEecCccccCCCcc
Confidence 3555666554 899999999999741 111 1222222222100 0 00113334455888888765321 11
Q ss_pred -------cHHHHHHHHHHHHhccCCCCCeEEEEeCCCC-ccCCCCCcchhHHHHHHHHHHHHhcCCcEEEEccccCce
Q 008029 346 -------TGAQYAWLKEDLHKLDRTVTPWLAAAWHPPW-YNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYE 415 (580)
Q Consensus 346 -------~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~-y~s~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~ye 415 (580)
.....+|..+.|..++ ..-+|+.+|.|+ +.....+.. .+.+.+++++|+.+++|+||+|.-.
T Consensus 150 ~~~~LrYP~weaey~lk~l~elk---~~r~IlLfhtpPd~~kg~~h~G-----S~~V~dlIk~~~P~ivl~Ghihe~~ 219 (255)
T PF14582_consen 150 EEFKLRYPAWEAEYSLKFLRELK---DYRKILLFHTPPDLHKGLIHVG-----SAAVRDLIKTYNPDIVLCGHIHESH 219 (255)
T ss_dssp CSSS-EEEHHHHHHHHGGGGGCT---SSEEEEEESS-BTBCTCTBTTS-----BHHHHHHHHHH--SEEEE-SSS-EE
T ss_pred ccccccchHHHHHHHHHHHHhcc---cccEEEEEecCCccCCCccccc-----HHHHHHHHHhcCCcEEEecccccch
Confidence 2234455566666653 234788899998 433322222 2578899999999999999999643
|
|
| >KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.7e-07 Score=102.37 Aligned_cols=179 Identities=20% Similarity=0.257 Sum_probs=107.3
Q ss_pred HHHHHHHHC--CCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHHHhhhhhccCCCeEEecCCCC
Q 008029 216 TTVDHLIQN--DPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRFMEPLTSRVPMMVIEGNHE 293 (580)
Q Consensus 216 ~~l~~i~~~--~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD 293 (580)
.++++|.++ ++|+|+++||++-.+.|... .+.--.......+.|......+|++++.||||
T Consensus 199 s~L~~ike~~~~iD~I~wTGD~~~H~~w~~t-----------------~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe 261 (577)
T KOG3770|consen 199 SALDHIKENHKDIDYIIWTGDNVAHDVWAQT-----------------EEENLSMLSRLTSLLSEYFPDVPVYPALGNHE 261 (577)
T ss_pred HHHHHHHhcCCCCCEEEEeCCCCcccchhhh-----------------HHHHHHHHHHHHHHHHHhCCCCceeeecccCC
Confidence 456667654 48999999999976543110 11111122334556677778999999999999
Q ss_pred CCCCcc-------cc-----cHHHHHhhc--CCCCCC-CCCCCcceEEEE-eCcEEEEEEcCcccC----------CCcH
Q 008029 294 IEPQVA-------GI-----TFKSYLTRF--AVPSEE-SGSNSNFYYSFN-AGGVHFIMLGAYVDY----------NSTG 347 (580)
Q Consensus 294 ~~~~~~-------~~-----~f~~y~~~f--~~P~~~-~~~~~~~yYsfd-~G~v~fI~Ldt~~~~----------~~~~ 347 (580)
..+... .. .|..+...| -+|... .....+-||... .+|.++|+||+..-+ ....
T Consensus 262 ~~P~N~F~~~~~~~~~~~~wly~~~~~~W~~wlp~e~~~t~~kga~Y~~~~~~Glr~IslNt~~c~~~N~~L~~n~tdp~ 341 (577)
T KOG3770|consen 262 IHPVNLFAPGSVPKRHSQLWLYKHLAGAWSTWLPAEAKETFLKGAYYLVLVIDGLRLISLNTNYCSAPNFWLYANQTDPI 341 (577)
T ss_pred CCcHhhcCCCCCcchhhhhHHHHHHHhhhhccCCHHHHhhhhcCcEEEEeecCCceEEEeccccccccceeeeecCCCch
Confidence 874321 01 112222222 133321 112334555544 589999999985322 2467
Q ss_pred HHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcC--CcEEEEccccCceeE
Q 008029 348 AQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYG--VDIVFSGHVHAYERM 417 (580)
Q Consensus 348 ~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~--VdlvlsGH~H~yeR~ 417 (580)
.|++|+..+|.++..++. -+-+++|.|+-... .. +.-...+-.++.++. +...|.||.|.-+-.
T Consensus 342 ~~lqWf~~~L~~ae~~Ge-kVhil~HIPpG~~~---c~--~~ws~~f~~iv~r~~~tI~gqf~GH~h~d~f~ 407 (577)
T KOG3770|consen 342 DQLQWFVDQLQEAESAGE-KVHILGHIPPGDGV---CL--EGWSINFYRIVNRFRSTIAGQFYGHTHIDEFR 407 (577)
T ss_pred HHhhHHHHHHHHHHhcCC-EEEEEEeeCCCCcc---hh--hhhhHHHHHHHHHHHHhhhhhccccCcceeEE
Confidence 889999999999864443 47788999965421 11 111234445555553 456799999986644
|
|
| >COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.78 E-value=3.7e-07 Score=89.04 Aligned_cols=191 Identities=18% Similarity=0.263 Sum_probs=111.9
Q ss_pred CeEEEEEcccCCCCCh-HHHHHHHHHCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHHHhhh
Q 008029 199 PHRIAVIGDLGLTSNS-STTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRFME 277 (580)
Q Consensus 199 ~~rfav~gD~g~~~~~-~~~l~~i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~~~l~ 277 (580)
.+|+++++|+|..... .+.++.+...++|+++.+||++|.... .+ ...-+.. + ++
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~-----~~-------------~~~~~~~---~---~e 58 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFG-----PK-------------EVAEELN---K---LE 58 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcC-----ch-------------HHHHhhh---H---HH
Confidence 5899999999987543 445555556799999999999954311 10 0000111 1 33
Q ss_pred hhc-cCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCCCCCCCcceEEEEeCcEEEEEEcCcc------cCCCcHH-H
Q 008029 278 PLT-SRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYV------DYNSTGA-Q 349 (580)
Q Consensus 278 ~l~-~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsfd~G~v~fI~Ldt~~------~~~~~~~-Q 349 (580)
.+. ..+|+++++||-|-. .... ........- .+ -..+.+++.|+.+.... .+...++ =
T Consensus 59 ~l~~~~~~v~avpGNcD~~-----~v~~-~l~~~~~~v------~~--~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I 124 (226)
T COG2129 59 ALKELGIPVLAVPGNCDPP-----EVID-VLKNAGVNV------HG--RVVEIGGYGFVGFGGSNPTPFNTPREFSEDEI 124 (226)
T ss_pred HHHhcCCeEEEEcCCCChH-----HHHH-HHHhccccc------cc--ceEEecCcEEEEecccCCCCCCCccccCHHHH
Confidence 333 579999999998853 1111 111121111 11 56778888888854311 1112233 3
Q ss_pred HHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcch-hHHHHHHHHHHHHhcCCcEEEEccccCceeEeeccccccCCC
Q 008029 350 YAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQE-FECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDAC 428 (580)
Q Consensus 350 ~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~-~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR~~pv~n~~~~~~ 428 (580)
+.-|++-+.+.+. +-.|+.+|.|+|........+ ...-...+.+++++.++.+.++||+|-+.-.-. -+
T Consensus 125 ~s~l~~~v~~~~~---~~~Il~~HaPP~gt~~d~~~g~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d~-------iG 194 (226)
T COG2129 125 YSKLKSLVKKADN---PVNILLTHAPPYGTLLDTPSGYVHVGSKAVRKLIEEFQPLLGLHGHIHESRGIDK-------IG 194 (226)
T ss_pred HHHHHHHHhcccC---cceEEEecCCCCCccccCCCCccccchHHHHHHHHHhCCceEEEeeecccccccc-------cC
Confidence 4455555555431 113999999999875442222 112246788889999999999999997543321 23
Q ss_pred CcEEEEeCC
Q 008029 429 GPVYITVGD 437 (580)
Q Consensus 429 G~vyIv~G~ 437 (580)
.++-|..|.
T Consensus 195 ~TivVNPG~ 203 (226)
T COG2129 195 NTIVVNPGP 203 (226)
T ss_pred CeEEECCCC
Confidence 455665555
|
|
| >TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase | Back alignment and domain information |
|---|
Probab=98.76 E-value=2.5e-07 Score=92.58 Aligned_cols=184 Identities=17% Similarity=0.197 Sum_probs=96.0
Q ss_pred EEEcccCCCCCh----HHHHHHHHH--CCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHHHhh
Q 008029 203 AVIGDLGLTSNS----STTVDHLIQ--NDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRFM 276 (580)
Q Consensus 203 av~gD~g~~~~~----~~~l~~i~~--~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~~~l 276 (580)
++++|+|.+... ...++.+.+ .+||+|+++||+++. +... . . . ....+.+.+.+
T Consensus 2 ~~iSDlHl~~~~~~~~~~~l~~l~~~~~~~d~lii~GDi~d~--~~~~--~------------~-~---~~~~~~~~~~l 61 (231)
T TIGR01854 2 LFISDLHLSPERPDITALFLDFLREEARKADALYILGDLFEA--WIGD--D------------D-P---STLARSVAQAI 61 (231)
T ss_pred eEEEecCCCCCChhHHHHHHHHHHhhhccCCEEEEcCceecc--ccCC--C------------C-C---CHHHHHHHHHH
Confidence 689999987542 234555544 379999999999952 2110 0 0 0 01123444555
Q ss_pred hhhcc-CCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCCCCCCCcceEEEEeCcEEEEEEcCcccCCCcH--------
Q 008029 277 EPLTS-RVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYVDYNSTG-------- 347 (580)
Q Consensus 277 ~~l~~-~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsfd~G~v~fI~Ldt~~~~~~~~-------- 347 (580)
+.+.. .+|+++++||||.... ..+.....+..- .....+..++-+++++-..... ..+
T Consensus 62 ~~L~~~~~~v~~v~GNHD~~~~------~~~~~~~gi~~l------~~~~~~~~~g~~ill~HGd~~~-~~d~~y~~~r~ 128 (231)
T TIGR01854 62 RQVSDQGVPCYFMHGNRDFLIG------KRFAREAGMTLL------PDPSVIDLYGQKVLLMHGDTLC-TDDTAYQAFRA 128 (231)
T ss_pred HHHHHCCCeEEEEcCCCchhhh------HHHHHHCCCEEE------CCCEEEEECCEEEEEEcCcccc-CCCHHHHHHHH
Confidence 55553 5899999999997421 112222111100 0112345555555554332111 111
Q ss_pred ----------------HHHHHHHHHHHhccCCC---CCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEE
Q 008029 348 ----------------AQYAWLKEDLHKLDRTV---TPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFS 408 (580)
Q Consensus 348 ----------------~Q~~WLe~~L~~~~r~~---~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~Vdlvls 408 (580)
....||.+.+.+..+++ .+ ..++.+ ....+++++.+++++++++
T Consensus 129 ~~r~~~~~~~~~~l~~~~r~~l~~~~~~~s~~~~~~~~-~~~~~~----------------~~~~~~~~~~~~~~~~~i~ 191 (231)
T TIGR01854 129 KVHQPWLQRLFLHLPLAVRVKLARKIRAESRADKQMKS-QDIMDV----------------NPAEVAAVMRRYGVDRLIH 191 (231)
T ss_pred HHhCHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCCCc-chhhCC----------------CHHHHHHHHHHcCCCEEEE
Confidence 12333444443321110 00 011111 1245677888899999999
Q ss_pred ccccCceeEeeccccccCCCCcEEEEeCCCCc
Q 008029 409 GHVHAYERMNRVYNYTLDACGPVYITVGDGGN 440 (580)
Q Consensus 409 GH~H~yeR~~pv~n~~~~~~G~vyIv~G~gG~ 440 (580)
||+|.-... +..+ +..+..|++.|+...
T Consensus 192 GHtH~~~~~-~~~~---~~~~~~~~~lgdW~~ 219 (231)
T TIGR01854 192 GHTHRPAIH-PLQA---DGQPATRIVLGDWYR 219 (231)
T ss_pred CCccCccee-eccc---CCCccEEEEECCCcc
Confidence 999987644 3211 123568999998743
|
This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown. |
| >cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.75 E-value=3.4e-08 Score=89.85 Aligned_cols=48 Identities=10% Similarity=-0.019 Sum_probs=31.2
Q ss_pred EEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEEccccCcee
Q 008029 368 LAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYER 416 (580)
Q Consensus 368 vIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR 416 (580)
.|++.|+|++....... ....-.+.+.+++.+++++++|+||+|....
T Consensus 58 ~Ilv~H~pp~~~~~~~~-~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~ 105 (129)
T cd07403 58 DILLTHAPPAGIGDGED-FAHRGFEAFLDFIDRFRPKLFIHGHTHLNYG 105 (129)
T ss_pred CEEEECCCCCcCcCccc-ccccCHHHHHHHHHHHCCcEEEEcCcCCCcC
Confidence 56777877764332110 0001245777888899999999999997544
|
TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >COG1768 Predicted phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.4e-07 Score=88.02 Aligned_cols=64 Identities=19% Similarity=0.227 Sum_probs=45.3
Q ss_pred CCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEEccccCceeEeeccccccCCCCcEEEEeCC
Q 008029 363 TVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDACGPVYITVGD 437 (580)
Q Consensus 363 ~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyIv~G~ 437 (580)
+...-.|||+|.|+.+..... ..+.+++++++|+.++.||.|.-.|-.+-+. +-.|+-|+.+.+
T Consensus 156 k~~~~fivM~HYPP~s~~~t~--------~~~sevlee~rv~~~lyGHlHgv~~p~~~~s---~v~Gi~y~Lvaa 219 (230)
T COG1768 156 KGVSKFIVMTHYPPFSDDGTP--------GPFSEVLEEGRVSKCLYGHLHGVPRPNIGFS---NVRGIEYMLVAA 219 (230)
T ss_pred cCcCeEEEEEecCCCCCCCCC--------cchHHHHhhcceeeEEeeeccCCCCCCCCcc---cccCceEEEEec
Confidence 344568999999998865432 2567788899999999999999877543222 234777765543
|
|
| >cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.63 E-value=3.4e-07 Score=92.46 Aligned_cols=192 Identities=17% Similarity=0.136 Sum_probs=99.9
Q ss_pred eEEEEEcccCCCC-------Ch---HHHHHHHHHCCCC-EEEEcccccccccccccCCCCCcccccCCCCCccccccHHH
Q 008029 200 HRIAVIGDLGLTS-------NS---STTVDHLIQNDPS-LILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPR 268 (580)
Q Consensus 200 ~rfav~gD~g~~~-------~~---~~~l~~i~~~~pD-fvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~ 268 (580)
++|++++|+|... .. ...++++.+.+|| +++.+||++....... + ..
T Consensus 1 l~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~---------------------~-~~ 58 (252)
T cd00845 1 LTILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPST---------------------A-TK 58 (252)
T ss_pred CEEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchh---------------------c-cC
Confidence 4899999999653 11 3456666667788 7899999985432100 0 00
Q ss_pred HHHHHHhhhhhccCCCeEEecCCCCCCCCcccccHHHHHhhcCCCC---C----C---CCCCCcceEEEEeCcEEE--EE
Q 008029 269 WDGWGRFMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPS---E----E---SGSNSNFYYSFNAGGVHF--IM 336 (580)
Q Consensus 269 wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~---~----~---~~~~~~~yYsfd~G~v~f--I~ 336 (580)
.....+.++.+ -.-++++||||+.... ..+........+|. + . .......|.-++.+++++ +.
T Consensus 59 ~~~~~~~l~~~---g~d~~~~GNHe~d~g~--~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~~~i~~~~g~kIgiiG 133 (252)
T cd00845 59 GEANIELMNAL---GYDAVTIGNHEFDYGL--DALAELYKDANFPVLSANLYDKDTGTGPPWAKPYKIIEVDGVKIGVIG 133 (252)
T ss_pred CcHHHHHHHhc---CCCEEeeccccccccH--HHHHHHHHhCCCCEEEEeeeccCCCCCCCCcCCeEEEEECCEEEEEEE
Confidence 11223333332 2455778999985332 23444444433331 1 0 001123456677787554 44
Q ss_pred EcCcccCC----------CcHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEE
Q 008029 337 LGAYVDYN----------STGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIV 406 (580)
Q Consensus 337 Ldt~~~~~----------~~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~Vdlv 406 (580)
+....... ......+-+++..++. +.+...+|++.|.+.... .++...+ .+||++
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~vIvl~H~g~~~~------------~~la~~~--~giDlv 198 (252)
T cd00845 134 LTTPDTPTYTPLGWIIGLPFEDLAEAVAVAEELL-AEGADVIILLSHLGLDDD------------EELAEEV--PGIDVI 198 (252)
T ss_pred eccccceeecCCCcccCceecCHHHHHHHHHHHH-hCCCCEEEEEeccCccch------------HHHHhcC--CCccEE
Confidence 43321100 0112233343322222 245678999999875431 1121111 589999
Q ss_pred EEccccCceeEeeccccccCCCCcEEEEeCCCC
Q 008029 407 FSGHVHAYERMNRVYNYTLDACGPVYITVGDGG 439 (580)
Q Consensus 407 lsGH~H~yeR~~pv~n~~~~~~G~vyIv~G~gG 439 (580)
|+||.|....... ..+++..+-+|+=|
T Consensus 199 lggH~H~~~~~~~------~~~~~~v~~~g~~~ 225 (252)
T cd00845 199 LGGHTHHLLEEPE------VVNGTLIVQAGKYG 225 (252)
T ss_pred EcCCcCcccCCCc------ccCCEEEEeCChhH
Confidence 9999998654311 12456666555433
|
This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich |
| >cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.4e-07 Score=91.15 Aligned_cols=32 Identities=19% Similarity=0.324 Sum_probs=24.5
Q ss_pred EEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEEccccCceeEe
Q 008029 369 AAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMN 418 (580)
Q Consensus 369 Iv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR~~ 418 (580)
|++.|.|.+- ...+.+++++||||+|.-++..
T Consensus 129 ilL~H~P~~~------------------~~~~~~~dl~lSGHtHgGqi~~ 160 (193)
T cd08164 129 ILLTHVPLYK------------------IFLEGKPGLILTGHDHEGCDYQ 160 (193)
T ss_pred EEEEccccee------------------ccccCCCCEEEeCccCCCeEEE
Confidence 8899999654 1224578999999999877754
|
Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the |
| >cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.59 E-value=4.1e-07 Score=89.49 Aligned_cols=197 Identities=14% Similarity=0.189 Sum_probs=99.2
Q ss_pred EEEcccCCCCCh---HHHHHHHHH----CCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHHHh
Q 008029 203 AVIGDLGLTSNS---STTVDHLIQ----NDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRF 275 (580)
Q Consensus 203 av~gD~g~~~~~---~~~l~~i~~----~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~~~ 275 (580)
++++|+|.+... ......+.+ .++|.++++||+++. +... . ......+ ...+...
T Consensus 1 ~~iSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~--~~~~--~-----------~~~~~~~---~~~~~~l 62 (217)
T cd07398 1 LFISDLHLGDGGPAADFLLLFLLAALALGEADALYLLGDIFDL--WFGD--D-----------EVVPPAA---HEVLAAL 62 (217)
T ss_pred CEeeeecCCCCCCCHHHHHHHHHhhhccCCCCEEEEeccEEEE--EecC--C-----------CCCChHH---HHHHHHH
Confidence 478999987543 222333333 489999999999953 2110 0 0000111 1112344
Q ss_pred hhhhccCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCCCCCCCcceEEEEeCcEEEEEEcCcccCCCcHHHHHHHHH
Q 008029 276 MEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYVDYNSTGAQYAWLKE 355 (580)
Q Consensus 276 l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsfd~G~v~fI~Ldt~~~~~~~~~Q~~WLe~ 355 (580)
++.+....+++.++||||.... ..+..+..... .......+.+++.+++++-... ++.....+.|+..
T Consensus 63 ~~~~~~~~~v~~v~GNHD~~~~------~~~~~~~~~~~-----~~~~~~~~~~~g~~~~~~HG~~-~d~~~~~~~~~~~ 130 (217)
T cd07398 63 LRLADRGTRVYYVPGNHDFLLG------DFFAEELGLIL-----LPDPLVHLELDGKRILLEHGDQ-FDTDDRAYQLLRR 130 (217)
T ss_pred HHHHHCCCeEEEECCCchHHHH------hHHHHHcCCEE-----eccceEEEeeCCeEEEEECCCc-CchhHHHHHHHHH
Confidence 4445578999999999997421 11111111110 0111225677888888776532 2334445555554
Q ss_pred HHHhccC------CCCCeEEEEeCCCCccC------CCCCcchhHHHHHHHHHHHHhcCCcEEEEccccCceeEeecccc
Q 008029 356 DLHKLDR------TVTPWLAAAWHPPWYNS------YSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNY 423 (580)
Q Consensus 356 ~L~~~~r------~~~pwvIv~~H~P~y~s------~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR~~pv~n~ 423 (580)
.+..... ....|..-........+ ........+...+.+..++.+++++++++||+|......
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~~----- 205 (217)
T cd07398 131 LGRNPYDQLLFLNRPLNRRRGIAGGLRWSSRYLKKKVKKAVAIIDVFEEAVARLARRKGVDGVICGHTHRPALHE----- 205 (217)
T ss_pred HhCcHHHHHHHhcchHHHHHHHHHhhhhhhHHHHhCccchHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCCeEE-----
Confidence 3221000 00000000000000000 000011122345667778889999999999999876543
Q ss_pred ccCCCCcEEEEeCC
Q 008029 424 TLDACGPVYITVGD 437 (580)
Q Consensus 424 ~~~~~G~vyIv~G~ 437 (580)
..+..|+.+|+
T Consensus 206 ---~~~~~~~n~G~ 216 (217)
T cd07398 206 ---LDGKLYINLGD 216 (217)
T ss_pred ---ECCEEEEECCC
Confidence 23778888886
|
YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l |
| >PRK09453 phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.1e-06 Score=84.56 Aligned_cols=75 Identities=15% Similarity=0.301 Sum_probs=46.8
Q ss_pred eEEEEEcccCCCCCh-HHHHHHHHHCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHHHhhhh
Q 008029 200 HRIAVIGDLGLTSNS-STTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRFMEP 278 (580)
Q Consensus 200 ~rfav~gD~g~~~~~-~~~l~~i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~~~l~~ 278 (580)
+|++++||+|..... .++++.+.+.++|.++++||+++.... .+..+.|+ .+...+.++.
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~-----------------~~~~~~~~--~~~~~~~l~~ 61 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPR-----------------NPLPEGYA--PKKVAELLNA 61 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcC-----------------CCCccccC--HHHHHHHHHh
Confidence 589999999975432 334555556799999999999853110 01111221 1223333433
Q ss_pred hccCCCeEEecCCCCCC
Q 008029 279 LTSRVPMMVIEGNHEIE 295 (580)
Q Consensus 279 l~~~vP~~~v~GNHD~~ 295 (580)
+ ..+++.+.||||..
T Consensus 62 ~--~~~v~~V~GNhD~~ 76 (182)
T PRK09453 62 Y--ADKIIAVRGNCDSE 76 (182)
T ss_pred c--CCceEEEccCCcch
Confidence 3 46899999999963
|
|
| >cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.53 E-value=2.9e-06 Score=87.19 Aligned_cols=188 Identities=15% Similarity=0.106 Sum_probs=95.8
Q ss_pred eEEEEEcccCCCCC-----------------hHHHHHHHHHCCCCEEEE-cccccccccccccCCCCCcccccCCCCCcc
Q 008029 200 HRIAVIGDLGLTSN-----------------SSTTVDHLIQNDPSLILM-VGDLTYANQYLTTGGKAASCYSCAFPDAPI 261 (580)
Q Consensus 200 ~rfav~gD~g~~~~-----------------~~~~l~~i~~~~pDfvl~-~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~ 261 (580)
++|++.+|+|.... ....++++.+.+|+.+++ +||++.......- ....
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~--------~~~~----- 67 (277)
T cd07410 1 LRILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLADY--------YAKI----- 67 (277)
T ss_pred CeEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHHHH--------hhhc-----
Confidence 47888888886421 123455666667887776 9999864321000 0000
Q ss_pred ccccHHHHHHHHHhhhhhccCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCC-------C-CCCCCcceEEEEeC-cE
Q 008029 262 RETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSE-------E-SGSNSNFYYSFNAG-GV 332 (580)
Q Consensus 262 ~e~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~-------~-~~~~~~~yYsfd~G-~v 332 (580)
+ ........+.|+.+ ... +.++||||+... ...+........+|.- . .......|.-++.+ ++
T Consensus 68 -~--~~~~~~~~~~ln~~--g~d-~~~lGNHe~d~g--~~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~i~~~~~g~ 139 (277)
T cd07410 68 -E--DGDPHPMIAAMNAL--GYD-AGTLGNHEFNYG--LDYLDKVIKQANFPVLSANVIDADTGEPFLKPYVILERDVGV 139 (277)
T ss_pred -c--cCCCChHHHHHHhc--CCC-EEeecccCcccC--HHHHHHHHHhCCCCEEEEEEEeCCCCCcccCCEEEEEecCCC
Confidence 0 00011233444444 333 566799998532 2334444444444321 0 01122456677888 76
Q ss_pred EEEEEcCcccC---------------CCcHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHH
Q 008029 333 HFIMLGAYVDY---------------NSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEAL 397 (580)
Q Consensus 333 ~fI~Ldt~~~~---------------~~~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~L 397 (580)
++-++.-.... ....+..++..+.|++ .+...+|+++|............ .+.....|
T Consensus 140 kVgviG~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~lr~---~~~D~IIvl~H~g~~~~~~~~~~----~~~~~~~l 212 (277)
T cd07410 140 KVGIIGLTTPQIPNWEKPNLIGGLKFTDPVETAKKYVPKLRA---EGADVVVVLAHGGFERDLEESLT----GENAAYEL 212 (277)
T ss_pred EEEEEecCCcccccccCcccCCCcEEcCHHHHHHHHHHHHHH---cCCCEEEEEecCCcCCCcccccC----CccHHHHH
Confidence 65554421110 0112234444444443 45778999999886543211000 11222344
Q ss_pred HHh-cCCcEEEEccccCce
Q 008029 398 LYQ-YGVDIVFSGHVHAYE 415 (580)
Q Consensus 398 l~k-y~VdlvlsGH~H~ye 415 (580)
.++ .+||++|.||.|...
T Consensus 213 a~~~~~vD~IlgGHsH~~~ 231 (277)
T cd07410 213 AEEVPGIDAILTGHQHRRF 231 (277)
T ss_pred HhcCCCCcEEEeCCCcccc
Confidence 444 589999999999754
|
CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos |
| >cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.52 E-value=1.9e-06 Score=87.61 Aligned_cols=191 Identities=19% Similarity=0.176 Sum_probs=101.4
Q ss_pred eEEEEEcccCCCC-----------ChHHHHHHHHHCCCC-EEEEcccccccccccccCCCCCcccccCCCCCccccccHH
Q 008029 200 HRIAVIGDLGLTS-----------NSSTTVDHLIQNDPS-LILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQP 267 (580)
Q Consensus 200 ~rfav~gD~g~~~-----------~~~~~l~~i~~~~pD-fvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~ 267 (580)
++|+.+.|+|.-. .....++++.+.+|+ +++.+||++....... + .
T Consensus 1 ~~il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~---------------------~-~ 58 (257)
T cd07406 1 FTILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLST---------------------A-T 58 (257)
T ss_pred CeEEEEccceeecccCCCCcCCHHHHHHHHHHHHhcCCCEEEEECCCccCCccchh---------------------h-c
Confidence 4678888887311 113455666666788 9999999985321100 0 0
Q ss_pred HHHHHHHhhhhhccCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCC------CC----CCCcceEEEEeCcEEE--E
Q 008029 268 RWDGWGRFMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEE------SG----SNSNFYYSFNAGGVHF--I 335 (580)
Q Consensus 268 ~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~------~~----~~~~~yYsfd~G~v~f--I 335 (580)
+.+...+.|+.+ .. -+.++||||+... ...+........+|.-. .+ ..-+.|.-++.+++++ +
T Consensus 59 ~g~~~~~~l~~l--~~-d~~~~GNHefd~g--~~~l~~~~~~~~~~~L~aNi~~~~~~~~~~~~~~~~i~~~~g~kIgvi 133 (257)
T cd07406 59 KGKQMVPVLNAL--GV-DLACFGNHEFDFG--EDQLQKRLGESKFPWLSSNVFDATGGGPLPNGKESAIIERAGVKIGLL 133 (257)
T ss_pred CCccHHHHHHhc--CC-cEEeecccccccC--HHHHHHHHhhCCCCEEEEEEEECCCCcccCCCCCeEEEEECCeEEEEE
Confidence 111223444433 22 3668999998532 23344433333332210 00 1124678888887654 4
Q ss_pred EEcCcccC---------CCcHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHh-cCCcE
Q 008029 336 MLGAYVDY---------NSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQ-YGVDI 405 (580)
Q Consensus 336 ~Ldt~~~~---------~~~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~k-y~Vdl 405 (580)
.+.+.... -....-.+.+++.+++..+.+...+|++.|-+.... + ++.++ .+||+
T Consensus 134 G~~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~~~~~~~D~iVvl~H~g~~~d-----------~----~la~~~~~iD~ 198 (257)
T cd07406 134 GLVEEEWLETLTIDPEYVRYRDYVETARELVDELREQGADLIIALTHMRLPND-----------K----RLAREVPEIDL 198 (257)
T ss_pred EEecccccccccCCCCcceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCchhh-----------H----HHHHhCCCCce
Confidence 44432111 001233444555444443456788999999874211 1 22333 48999
Q ss_pred EEEccccCceeEeeccccccCCCCcEEEEeCCCCc
Q 008029 406 VFSGHVHAYERMNRVYNYTLDACGPVYITVGDGGN 440 (580)
Q Consensus 406 vlsGH~H~yeR~~pv~n~~~~~~G~vyIv~G~gG~ 440 (580)
+|+||.|..... ..+++..+-+|+-|.
T Consensus 199 IlgGH~H~~~~~--------~~~~t~vv~~g~~g~ 225 (257)
T cd07406 199 ILGGHDHEYILV--------QVGGTPIVKSGSDFR 225 (257)
T ss_pred EEecccceeEee--------eECCEEEEeCCcCcc
Confidence 999999986622 124566666666554
|
CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th |
| >TIGR00583 mre11 DNA repair protein (mre11) | Back alignment and domain information |
|---|
Probab=98.50 E-value=1.6e-06 Score=93.28 Aligned_cols=41 Identities=29% Similarity=0.292 Sum_probs=31.2
Q ss_pred CeEEEEEcccCCCCC---------h----HHHHHHHHHCCCCEEEEcccccccc
Q 008029 199 PHRIAVIGDLGLTSN---------S----STTVDHLIQNDPSLILMVGDLTYAN 239 (580)
Q Consensus 199 ~~rfav~gD~g~~~~---------~----~~~l~~i~~~~pDfvl~~GDl~Y~d 239 (580)
.+||++++|+|.+.. . .++++.+.+.++|+||++||+.+..
T Consensus 3 ~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~ 56 (405)
T TIGR00583 3 TIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHEN 56 (405)
T ss_pred ceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCC
Confidence 589999999998742 1 2344455568999999999999653
|
All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria. |
| >COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=98.41 E-value=1.6e-06 Score=93.45 Aligned_cols=74 Identities=23% Similarity=0.348 Sum_probs=51.0
Q ss_pred eEEEEEcccCCCC-C-------------hHHHHHHHHHCCCCEEEEcccccccccccccCCCCCcccccCCCCCcccccc
Q 008029 200 HRIAVIGDLGLTS-N-------------SSTTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETY 265 (580)
Q Consensus 200 ~rfav~gD~g~~~-~-------------~~~~l~~i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y 265 (580)
+||++.+|+|.+. . ....++.+.+.++||||++||+.+... |..+
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~-------------------Ps~~-- 59 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNN-------------------PSPR-- 59 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCC-------------------CCHH--
Confidence 5899999999982 1 123455566789999999999996531 1111
Q ss_pred HHHHHHHHHhhhhhc-cCCCeEEecCCCCCCC
Q 008029 266 QPRWDGWGRFMEPLT-SRVPMMVIEGNHEIEP 296 (580)
Q Consensus 266 ~~~wd~~~~~l~~l~-~~vP~~~v~GNHD~~~ 296 (580)
.-..+.+.++.+. .++|++++.||||...
T Consensus 60 --a~~~~~~~l~~l~~~~Ipv~~I~GNHD~~~ 89 (390)
T COG0420 60 --ALKLFLEALRRLKDAGIPVVVIAGNHDSPS 89 (390)
T ss_pred --HHHHHHHHHHHhccCCCcEEEecCCCCchh
Confidence 1123444555543 5899999999999864
|
|
| >COG0622 Predicted phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.38 E-value=1.7e-05 Score=75.67 Aligned_cols=39 Identities=18% Similarity=0.184 Sum_probs=29.8
Q ss_pred eEEEEEcccCCCCCh-HHHHHHHHHCCCCEEEEccccccc
Q 008029 200 HRIAVIGDLGLTSNS-STTVDHLIQNDPSLILMVGDLTYA 238 (580)
Q Consensus 200 ~rfav~gD~g~~~~~-~~~l~~i~~~~pDfvl~~GDl~Y~ 238 (580)
++|++++|+|..... ....+.....++|+|+|+||.+..
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~ 41 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSP 41 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCc
Confidence 689999999987532 334444456799999999999954
|
|
| >cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.35 E-value=1.1e-05 Score=82.06 Aligned_cols=191 Identities=18% Similarity=0.242 Sum_probs=99.8
Q ss_pred EEEEcccCCCCChHHH---HHHHHH---CCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHHHh
Q 008029 202 IAVIGDLGLTSNSSTT---VDHLIQ---NDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRF 275 (580)
Q Consensus 202 fav~gD~g~~~~~~~~---l~~i~~---~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~~~ 275 (580)
|+|.||.|.. .... ++.+.+ .++|++|++||+.-... . ...++.+ ....| ..+..|.+.
T Consensus 1 i~v~Gd~HG~--~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~--~---~d~~~~~-------~p~k~-~~~~~f~~~ 65 (262)
T cd00844 1 IAVEGCCHGE--LDKIYETLEKIEKKEGTKVDLLICCGDFQAVRN--E---ADLKCMA-------VPPKY-RKMGDFYKY 65 (262)
T ss_pred CEEEecCCcc--HHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCC--c---chhhhhc-------cchhh-hhhhhHHHH
Confidence 5899999984 3333 333332 36999999999953210 0 0001100 11122 124455555
Q ss_pred hhhhc-cCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCCCCCCCcceE-----EEEeCcEEEEEEcCccc---CC--
Q 008029 276 MEPLT-SRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSNFYY-----SFNAGGVHFIMLGAYVD---YN-- 344 (580)
Q Consensus 276 l~~l~-~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yY-----sfd~G~v~fI~Ldt~~~---~~-- 344 (580)
++.+. ..+|++++.||||... .+.+ ++.... ...+.+| .+++++++|..|..... +.
T Consensus 66 ~~g~~~~p~~t~fi~GNHE~~~--------~l~~---l~~gg~-v~~Ni~~Lg~~~v~~~~GlrIaGLsG~~~~~~~~~~ 133 (262)
T cd00844 66 YSGEKKAPILTIFIGGNHEASN--------YLWE---LPYGGW-VAPNIYYLGYAGVVNFGGLRIAGLSGIYKSHDYRKG 133 (262)
T ss_pred hcCCccCCeeEEEECCCCCCHH--------HHHh---hcCCCe-ecCcEEEecCCCEEEECCeEEEEecccccccccccc
Confidence 54332 5778899999999521 1111 111000 0123332 45678999999986321 11
Q ss_pred ------CcHHHHHHHH----HHHHhccCCCCCeEEEEeCCCCccCCCCCcch------------h---HHHHHHHHHHHH
Q 008029 345 ------STGAQYAWLK----EDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQE------------F---ECMRQEMEALLY 399 (580)
Q Consensus 345 ------~~~~Q~~WLe----~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~------------~---~~~r~~l~~Ll~ 399 (580)
....+++.+. .++.+......+--|+++|.|++......... . ..-...+..|++
T Consensus 134 ~~~~~~~t~~~~rs~y~~r~~~~~kl~~~~~~vDIlLSHdWP~gI~~~~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~ll~ 213 (262)
T cd00844 134 HFERPPYSEDTKRSAYHVRNIEVFKLKQLKQPIDIFLSHDWPRGIYKHGDKKQLLRKKPFFRQDIESGTLGSPAAEELLK 213 (262)
T ss_pred cccCCCCCHHHHHHhhhhhHHHHHHHHhcCCCCcEEEeCCCCcchhhccchHHhhhcCccchhcccccCCCCHHHHHHHH
Confidence 1233333211 11111111111336899999987653211000 0 001246778999
Q ss_pred hcCCcEEEEccccC-ceeEee
Q 008029 400 QYGVDIVFSGHVHA-YERMNR 419 (580)
Q Consensus 400 ky~VdlvlsGH~H~-yeR~~p 419 (580)
+.+....|+||.|. |++..|
T Consensus 214 ~lkPryhf~gH~H~~f~~~~~ 234 (262)
T cd00844 214 HLKPRYWFSAHLHVKFAALVP 234 (262)
T ss_pred HhCCCEEEEecCCcccceecC
Confidence 99999999999998 777654
|
Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s |
| >cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.2e-05 Score=82.16 Aligned_cols=177 Identities=18% Similarity=0.171 Sum_probs=90.8
Q ss_pred HHHHHHHHC-CCCEE-EEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHHHhhhhhccCCCeEEecCCCC
Q 008029 216 TTVDHLIQN-DPSLI-LMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRFMEPLTSRVPMMVIEGNHE 293 (580)
Q Consensus 216 ~~l~~i~~~-~pDfv-l~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD 293 (580)
..++++.+. ++|.+ +.+||+....... +..+.....+.|+. +++.++.||||
T Consensus 40 ~~v~~~~~~~~~~~l~l~~GD~~~gs~~~----------------------~~~~g~~~~~~l~~----~g~da~~GNHe 93 (264)
T cd07411 40 TLIKRIRAERNPNTLLLDGGDTWQGSGEA----------------------LYTRGQAMVDALNA----LGVDAMVGHWE 93 (264)
T ss_pred HHHHHHHHhcCCCeEEEeCCCccCCChHH----------------------hhcCChhHHHHHHh----hCCeEEecccc
Confidence 345666566 89977 5799999542110 00111222333333 45555559999
Q ss_pred CCCCcccccHHHHHhhcCCCCCCC-------C-CCCcceEEEEeCcEE--EEEEcCcccCC----------CcHHHHHHH
Q 008029 294 IEPQVAGITFKSYLTRFAVPSEES-------G-SNSNFYYSFNAGGVH--FIMLGAYVDYN----------STGAQYAWL 353 (580)
Q Consensus 294 ~~~~~~~~~f~~y~~~f~~P~~~~-------~-~~~~~yYsfd~G~v~--fI~Ldt~~~~~----------~~~~Q~~WL 353 (580)
+... ...+....+.+.+|.-.+ + .....|.-++.++++ +|.+.+..... ......+.+
T Consensus 94 fd~g--~~~l~~~~~~~~~~~l~aN~~~~~~~~~~~~~~~i~~~~g~kVgviG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (264)
T cd07411 94 FTYG--PERVRELFGRLNWPFLAANVYDDEAGERVFPPYRIKEVGGVKIGVIGQTFPYVPIANPPRFTPGLTFGIREEEL 171 (264)
T ss_pred cccC--HHHHHHHHhhCCCCEEEEEEEeCCCCCcccCCEEEEEECCEEEEEEEeccCCcccccCcCCCCCcEECCHHHHH
Confidence 8632 233444444444442110 0 112236667888755 55554421100 012334555
Q ss_pred HHHHHhcc-CCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHh-cCCcEEEEccccCceeEeeccccccCCCCcE
Q 008029 354 KEDLHKLD-RTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQ-YGVDIVFSGHVHAYERMNRVYNYTLDACGPV 431 (580)
Q Consensus 354 e~~L~~~~-r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~k-y~VdlvlsGH~H~yeR~~pv~n~~~~~~G~v 431 (580)
++.+++.. ..+...+|++.|-+.... + .+.++ .+||++|.||.|..... |. ..-++++
T Consensus 172 ~~~~~~~~~~~~~D~iI~l~H~g~~~~-----------~----~la~~~~~iDlilgGH~H~~~~~-~~----~~~~~t~ 231 (264)
T cd07411 172 QEVVVKLRREEGVDVVVLLSHNGLPVD-----------V----ELAERVPGIDVILSGHTHERTPK-PI----IAGGGTL 231 (264)
T ss_pred HHHHHHHHHhCCCCEEEEEecCCchhh-----------H----HHHhcCCCCcEEEeCcccccccC-cc----cccCCEE
Confidence 55544332 245678999999874311 1 12223 47999999999964321 11 0124666
Q ss_pred EEEeCCCCc
Q 008029 432 YITVGDGGN 440 (580)
Q Consensus 432 yIv~G~gG~ 440 (580)
.+-+|.-|.
T Consensus 232 v~~~g~~~~ 240 (264)
T cd07411 232 VVEAGSHGK 240 (264)
T ss_pred EEEcCcccc
Confidence 666666555
|
SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy |
| >cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.24 E-value=2.3e-05 Score=81.11 Aligned_cols=85 Identities=14% Similarity=0.104 Sum_probs=47.3
Q ss_pred HHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHh--cCCcEEEEccccCceeEeeccccccCC
Q 008029 350 YAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQ--YGVDIVFSGHVHAYERMNRVYNYTLDA 427 (580)
Q Consensus 350 ~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~k--y~VdlvlsGH~H~yeR~~pv~n~~~~~ 427 (580)
.+-+++.+++.+..+...+|++.|........... .+.......+++.+ .+||++|.||.|..... +. ...
T Consensus 177 ~e~~~~~v~~lr~~~~D~IIvL~H~G~~~~~~~~~--~~~~~~~~~~l~~~~~~~iD~IlgGHsH~~~~~-~~----~~~ 249 (288)
T cd07412 177 VEAINAVAPELKAGGVDAIVVLAHEGGSTKGGDDT--CSAASGPIADIVNRLDPDVDVVFAGHTHQAYNC-TV----PAG 249 (288)
T ss_pred HHHHHHHHHHHHHCCCCEEEEEeCCCCCCCCCCcc--ccccChhHHHHHhhcCCCCCEEEeCccCccccc-cc----cCc
Confidence 34455555554434677899999987653221100 00011122334444 37999999999986532 10 023
Q ss_pred CCcEEEEeCCCCcc
Q 008029 428 CGPVYITVGDGGNI 441 (580)
Q Consensus 428 ~G~vyIv~G~gG~~ 441 (580)
+++..+-.|+-|..
T Consensus 250 ~~~~v~q~g~~g~~ 263 (288)
T cd07412 250 NPRLVTQAGSYGKA 263 (288)
T ss_pred CCEEEEecChhhce
Confidence 56777777766653
|
YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi |
| >cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.23 E-value=1.6e-05 Score=80.77 Aligned_cols=181 Identities=19% Similarity=0.144 Sum_probs=92.8
Q ss_pred eEEEEEcccCCCCC--------h---HHHHHHHHHCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHH
Q 008029 200 HRIAVIGDLGLTSN--------S---STTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPR 268 (580)
Q Consensus 200 ~rfav~gD~g~~~~--------~---~~~l~~i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~ 268 (580)
++|+.++|+|.... . ...++++.+.++++++.+||++..... .. ...
T Consensus 1 i~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~-~~---------------------~~~ 58 (257)
T cd07408 1 ITILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPI-SD---------------------LDK 58 (257)
T ss_pred CEEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchh-hh---------------------hcC
Confidence 47899999996421 1 233444444457899999999853211 00 001
Q ss_pred HHHHHHhhhhhccCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCCC-------CC-CCcceEEEEeC-cE--EEEEE
Q 008029 269 WDGWGRFMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEES-------GS-NSNFYYSFNAG-GV--HFIML 337 (580)
Q Consensus 269 wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~-------~~-~~~~yYsfd~G-~v--~fI~L 337 (580)
.....+.|..+ ..-+ .++||||+.. +...+..+...+.+|.-.. +. .-..|.-++.+ ++ -|+.+
T Consensus 59 g~~~~~~ln~~--g~d~-~~~GNHefd~--G~~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~py~i~~~~~G~kIgviG~ 133 (257)
T cd07408 59 GETIIKIMNAV--GYDA-VTPGNHEFDY--GLDRLKELSKEADFPFLSANVYDNDTGKRVFKPYKIKELGNGVKVGVIGL 133 (257)
T ss_pred CcHHHHHHHhc--CCcE-EccccccccC--CHHHHHHHHhhCCCCEEEEEEEEcCCCCcccCCEEEEEcCCCCEEEEEee
Confidence 12223444433 3444 4679999853 2334455555554443110 10 11235555777 54 45555
Q ss_pred cCccc-C----C--C---cHHHHHHHHHH-HHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHh-cCCcE
Q 008029 338 GAYVD-Y----N--S---TGAQYAWLKED-LHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQ-YGVDI 405 (580)
Q Consensus 338 dt~~~-~----~--~---~~~Q~~WLe~~-L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~k-y~Vdl 405 (580)
-+... . . . ...-.+-+++. ..+..+.+...+|++.|.+....... +. ... +..+ .+||+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~~~~D~iIvl~H~G~~~~~~~-~~-----~~~---la~~~~giDv 204 (257)
T cd07408 134 TTPETATKTHPKNVKDVTFEDPIEEAKKVIVAALKAKGADVIVALGHLGVDRTSSP-WT-----STE---LAANVTGIDL 204 (257)
T ss_pred cCcCcccccCccccCCcEEecHHHHHHHHHHHHHHhCCCCEEEEEeCcCcCCCCCC-cc-----HHH---HHHhCCCceE
Confidence 44210 0 0 0 01122333333 22222346778999999886543211 11 112 2223 48999
Q ss_pred EEEccccCcee
Q 008029 406 VFSGHVHAYER 416 (580)
Q Consensus 406 vlsGH~H~yeR 416 (580)
+|.||.|....
T Consensus 205 IigGH~H~~~~ 215 (257)
T cd07408 205 IIDGHSHTTIE 215 (257)
T ss_pred EEeCCCccccc
Confidence 99999997643
|
SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet |
| >cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.22 E-value=5.3e-05 Score=76.82 Aligned_cols=191 Identities=16% Similarity=0.204 Sum_probs=103.4
Q ss_pred EEEEEcccCCCCChH---HHHHHHH-HCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHHHhh
Q 008029 201 RIAVIGDLGLTSNSS---TTVDHLI-QNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRFM 276 (580)
Q Consensus 201 rfav~gD~g~~~~~~---~~l~~i~-~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~~~l 276 (580)
||+++||.=...... ..+.++. +.++||++..||++-.. .+. . ....+.|
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg-------~gl------------~-------~~~~~~L 54 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGG-------KGI------------T-------PKIAKEL 54 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCC-------CCC------------C-------HHHHHHH
Confidence 588999985543333 3344444 35799999999998431 110 0 1122333
Q ss_pred hhhccCCCeEEecCCCCCCCCcccccHHHHHhhcC---CCCCCC-CCCCcceEEEEeCcEEEEEEc--CcccCCCcHHHH
Q 008029 277 EPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFA---VPSEES-GSNSNFYYSFNAGGVHFIMLG--AYVDYNSTGAQY 350 (580)
Q Consensus 277 ~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~---~P~~~~-~~~~~~yYsfd~G~v~fI~Ld--t~~~~~~~~~Q~ 350 (580)
..+ .+-+ ++.|||++... ....+..... .|.+-+ ......|+-++.+++++-+++ +.........-+
T Consensus 55 ~~~--G~D~-iTlGNH~fD~g----el~~~l~~~~~~l~~aN~~~~~pg~~~~i~~~~G~kIaVigl~g~~~~~~~~~P~ 127 (255)
T cd07382 55 LSA--GVDV-ITMGNHTWDKK----EILDFIDEEPRLLRPANYPPGTPGRGYGVVEVNGKKIAVINLMGRVFMPPLDNPF 127 (255)
T ss_pred Hhc--CCCE-EEecccccCcc----hHHHHHhcCcCceEeeecCCCCCCCCeEEEEECCEEEEEEEEecccCCCcCCCHH
Confidence 333 3444 45599998643 2334433331 222211 112345777888876655544 222211222234
Q ss_pred HHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEEccccCceeEeeccccccCCCCc
Q 008029 351 AWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDACGP 430 (580)
Q Consensus 351 ~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR~~pv~n~~~~~~G~ 430 (580)
+-+++.+++.+. +...+||.+|.-.. .+ +.++.. ..+-+||+++.||+|...-- ..+-|+|+
T Consensus 128 ~~~~~~v~~lk~-~~D~IIV~~H~g~t-------sE----k~ala~-~ldg~VdvIvGtHTHv~t~d-----~~il~~gT 189 (255)
T cd07382 128 RAADELLEELKE-EADIIFVDFHAEAT-------SE----KIALGW-YLDGRVSAVVGTHTHVQTAD-----ERILPGGT 189 (255)
T ss_pred HHHHHHHHHHhc-CCCEEEEEECCCCC-------HH----HHHHHH-hCCCCceEEEeCCCCccCCc-----cEEeeCCe
Confidence 446666666543 56789999998421 11 122332 22346999999999974222 12236899
Q ss_pred EEEEe-CCCCccc
Q 008029 431 VYITV-GDGGNIE 442 (580)
Q Consensus 431 vyIv~-G~gG~~e 442 (580)
.||+- |.-|...
T Consensus 190 a~itd~Gm~G~~~ 202 (255)
T cd07382 190 AYITDVGMTGPYD 202 (255)
T ss_pred EEEecCccccCCC
Confidence 89864 6666654
|
DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.14 E-value=3.9e-05 Score=79.14 Aligned_cols=157 Identities=18% Similarity=0.212 Sum_probs=83.4
Q ss_pred HHHHHHHCCCC-EEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHHHhhhhhccCCCeEEecCCCCCC
Q 008029 217 TVDHLIQNDPS-LILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIE 295 (580)
Q Consensus 217 ~l~~i~~~~pD-fvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~ 295 (580)
.++++.+.+++ +++.+||+....... .. .+.....+.|+.+ ..- +.++||||+.
T Consensus 40 ~v~~~r~~~~~~l~ld~GD~~~gs~~~--------------------~~--~~g~~~~~~ln~~--g~D-~~~lGNHefd 94 (281)
T cd07409 40 LVKELRAENPNVLFLNAGDAFQGTLWY--------------------TL--YKGNADAEFMNLL--GYD-AMTLGNHEFD 94 (281)
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCcchh--------------------hh--cCChHHHHHHHhc--CCC-EEEecccccc
Confidence 45555555677 566699998542110 00 0112223444443 344 4457999986
Q ss_pred CCcccccHHHHHhhcCCCCCCC-----C------CCCcceEEEEeCcEEE--EEEcCcccC---C-----CcHHHHHHHH
Q 008029 296 PQVAGITFKSYLTRFAVPSEES-----G------SNSNFYYSFNAGGVHF--IMLGAYVDY---N-----STGAQYAWLK 354 (580)
Q Consensus 296 ~~~~~~~f~~y~~~f~~P~~~~-----~------~~~~~yYsfd~G~v~f--I~Ldt~~~~---~-----~~~~Q~~WLe 354 (580)
.. ...+..+..+..+|.-.. . ..-..|.-++.+++++ |.+-+.... . ......+.++
T Consensus 95 ~G--~~~l~~~~~~~~~p~l~aNv~~~~~~~~~~~~~~p~~i~~~~G~kIgviG~~~~~~~~~~~~~~~~~~~d~~~~~~ 172 (281)
T cd07409 95 DG--VEGLAPFLNNLKFPVLSANIDTSNEPPLLDGLLKPSTILTVGGEKIGIIGYTTPDTTELSSPGGKVKFLDEIEAAQ 172 (281)
T ss_pred CC--HHHHHHHHHhCCCCEEEEeeecCCCccccccccCCeEEEEECCEEEEEEEEecCcccccccCCCceEECCHHHHHH
Confidence 43 233444444444432110 0 1123466778887554 444332110 0 1123345677
Q ss_pred HHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHh-cCCcEEEEccccCce
Q 008029 355 EDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQ-YGVDIVFSGHVHAYE 415 (580)
Q Consensus 355 ~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~k-y~VdlvlsGH~H~ye 415 (580)
+.+++.+..+...+|++.|-.... . . .+.++ .+||+++.||.|...
T Consensus 173 ~~v~~lr~~~~D~II~l~H~G~~~-----------d-~---~la~~~~giD~IiggH~H~~~ 219 (281)
T cd07409 173 KEADKLKAQGVNKIIALSHSGYEV-----------D-K---EIARKVPGVDVIVGGHSHTFL 219 (281)
T ss_pred HHHHHHHhcCCCEEEEEeccCchh-----------H-H---HHHHcCCCCcEEEeCCcCccc
Confidence 766666545677899999986321 0 1 22233 489999999999853
|
CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si |
| >PRK04036 DNA polymerase II small subunit; Validated | Back alignment and domain information |
|---|
Probab=98.12 E-value=3.3e-05 Score=85.96 Aligned_cols=204 Identities=18% Similarity=0.209 Sum_probs=104.2
Q ss_pred CCeEEEEEcccCCCCCh------HHHHHHHH---------HCCCCEEEEcccccccccccccCCCCCcccccCCCCCccc
Q 008029 198 YPHRIAVIGDLGLTSNS------STTVDHLI---------QNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIR 262 (580)
Q Consensus 198 ~~~rfav~gD~g~~~~~------~~~l~~i~---------~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~ 262 (580)
..+++++++|+|.+... ...++.+. ..+++.++++||++...+.... .. ......
T Consensus 242 ~~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~--~~--------~~~~~~ 311 (504)
T PRK04036 242 EKVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPG--QE--------EELEIV 311 (504)
T ss_pred CccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCcc--ch--------hhccch
Confidence 36899999999987542 23344444 5579999999999964211000 00 000001
Q ss_pred cccHHHHHHHHHhhhhhccCCCeEEecCCCCCCCCccc--ccHHHHHhhcCCCCCCCCCCCcceEEEEeCcEEEEEEcCc
Q 008029 263 ETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIEPQVAG--ITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAY 340 (580)
Q Consensus 263 e~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~--~~f~~y~~~f~~P~~~~~~~~~~yYsfd~G~v~fI~Ldt~ 340 (580)
+.+ .+++.+.++++.+...+|+++++||||....... .....|...+..+. ..-..+ -+.+.+++.++++....
T Consensus 312 ~~~-~~~~~l~~~L~~L~~~i~V~~ipGNHD~~~~~lPQ~~l~~~l~~~l~~~~--v~~lsN-P~~i~l~G~~iLl~HG~ 387 (504)
T PRK04036 312 DIY-EQYEAAAEYLKQIPEDIKIIISPGNHDAVRQAEPQPAFPEEIRSLFPEHN--VTFVSN-PALVNLHGVDVLIYHGR 387 (504)
T ss_pred hhH-HHHHHHHHHHHhhhcCCeEEEecCCCcchhhccCCCCccHHHHHhcCcCC--eEEecC-CeEEEECCEEEEEECCC
Confidence 111 2234556677777788999999999997532111 11122322221110 000112 23577788888776542
Q ss_pred c-----cC---CCcHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEEcccc
Q 008029 341 V-----DY---NSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVH 412 (580)
Q Consensus 341 ~-----~~---~~~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H 412 (580)
. .+ .....-.+.|++.|... .-+| ..-.+.|.|..... + +.-+.-.|+++.||.|
T Consensus 388 ~idDl~~~i~~~s~~~p~~~m~~~l~~r--HlaP--t~p~~~~~~p~~~D-~------------lvi~~~Pdv~~~GH~H 450 (504)
T PRK04036 388 SIDDVISLIPGASYEKPGKAMEELLKRR--HLAP--IYGGRTPIAPEKED-Y------------LVIDEVPDIFHTGHVH 450 (504)
T ss_pred CHHHHHhhcccccccCHHHHHHHHHHhc--ccCC--CCCCCEEeCcCCCC-C------------EEEecCCCEEEeCCCC
Confidence 1 11 01123345666666541 1111 00011222221110 0 1111235899999999
Q ss_pred CceeEeeccccccCCCCcEEEEeCCCCc
Q 008029 413 AYERMNRVYNYTLDACGPVYITVGDGGN 440 (580)
Q Consensus 413 ~yeR~~pv~n~~~~~~G~vyIv~G~gG~ 440 (580)
.+.... -.|+.+|.+|+.-.
T Consensus 451 ~~~~~~--------~~g~~~IN~gsf~~ 470 (504)
T PRK04036 451 INGYGK--------YRGVLLINSGTWQA 470 (504)
T ss_pred ccceEE--------ECCEEEEECCcccc
Confidence 976542 35788888887443
|
|
| >cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.11 E-value=0.00024 Score=73.32 Aligned_cols=204 Identities=15% Similarity=0.158 Sum_probs=103.1
Q ss_pred CeEEEEEcccCCCCC--------------hHHHHHHHH----HCCCC-EEEEcccccccccccccCCCCCcccccCCCCC
Q 008029 199 PHRIAVIGDLGLTSN--------------SSTTVDHLI----QNDPS-LILMVGDLTYANQYLTTGGKAASCYSCAFPDA 259 (580)
Q Consensus 199 ~~rfav~gD~g~~~~--------------~~~~l~~i~----~~~pD-fvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~ 259 (580)
+++|+..+|+|.... ..+.++++. +.+++ +++.+||......+
T Consensus 5 ~ltILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~------------------ 66 (282)
T cd07407 5 DINFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGL------------------ 66 (282)
T ss_pred eEEEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeec------------------
Confidence 589999999996421 022233332 23555 67889999954311
Q ss_pred ccccccHHHHHHHHHhhhhhccCCCeEEecCCCCCCCCccc-ccHHHHHhhcCCCCC--------CCCC---CCcceEEE
Q 008029 260 PIRETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIEPQVAG-ITFKSYLTRFAVPSE--------ESGS---NSNFYYSF 327 (580)
Q Consensus 260 p~~e~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~-~~f~~y~~~f~~P~~--------~~~~---~~~~yYsf 327 (580)
...+..++....+.|+.+. -=.+++||||+...... ..+..+.....+|.- +.+. ....|.-+
T Consensus 67 --~~~~~~~g~~~~~~mN~mg---yDa~tlGNHEFd~g~~~l~~l~~~~~~~~fp~l~aNi~~~~~~~~~~~~~~~y~i~ 141 (282)
T cd07407 67 --SDASPPPGSYSNPIFRMMP---YDLLTIGNHELYNYEVADDEYEGFVPSWGDRYLTSNVDITDDSGLLVPIGSRYRKF 141 (282)
T ss_pred --eeeecCCChHHHHHHHhcC---CcEEeecccccCccccHHHHHHHHHhhcCCCEEEEEEEEeCCCCcccccccceEEE
Confidence 1111112333344554431 12567999999532211 122223333333321 0001 11236666
Q ss_pred EeC-cEE--EEEEcCccc-------CCC--cHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHH
Q 008029 328 NAG-GVH--FIMLGAYVD-------YNS--TGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEME 395 (580)
Q Consensus 328 d~G-~v~--fI~Ldt~~~-------~~~--~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~ 395 (580)
+.+ +++ +|.+-+... +.. ...+.+|+.+.|++ .+...+|++.|....... +. .+...
T Consensus 142 ~~~~G~kIgiiGltt~~~~~~~~~~f~d~~~~~~~~~v~~~l~~---~~~DvIIvlsH~G~~~d~-----~~---~~~~~ 210 (282)
T cd07407 142 TTKHGLRVLAFGFLFDFKGAANGVTVQPVADVVQEPWFQDAINN---EDVDLILVLGHMPVRDDA-----EF---KVLHD 210 (282)
T ss_pred EcCCCcEEEEEEEecccccCCCCcEEcCHHHHHHHHHHHHHHHh---cCCCEEEEEeCCCCCCCc-----cH---HHHHH
Confidence 765 655 555533211 011 12223487777764 356789999998764331 11 11112
Q ss_pred HHHHhc-CCc-EEEEccccCceeEeeccccccCCCCcEEEEeCCCCcccc
Q 008029 396 ALLYQY-GVD-IVFSGHVHAYERMNRVYNYTLDACGPVYITVGDGGNIEQ 443 (580)
Q Consensus 396 ~Ll~ky-~Vd-lvlsGH~H~yeR~~pv~n~~~~~~G~vyIv~G~gG~~e~ 443 (580)
.+.++. ++| ++|.||+|..... ++ .+|+..+-.|.-|..-+
T Consensus 211 ~la~~~~~id~~Ii~GHsH~~~~~-~~------~~~~~ivq~G~~g~~lg 253 (282)
T cd07407 211 AIRKIFPDTPIQFLGGHSHVRDFT-QY------DSSSTGLESGRYLETVG 253 (282)
T ss_pred HHHHhCCCCCEEEEeCCcccccce-ec------cCcEEEEeccchhhceE
Confidence 233444 577 7999999975332 11 24666666677665433
|
YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at |
| >COG2908 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.10 E-value=4.4e-05 Score=75.37 Aligned_cols=189 Identities=18% Similarity=0.254 Sum_probs=97.6
Q ss_pred EEcccCCCCChHHH---H-HHHHHC--CCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHHHhhh
Q 008029 204 VIGDLGLTSNSSTT---V-DHLIQN--DPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRFME 277 (580)
Q Consensus 204 v~gD~g~~~~~~~~---l-~~i~~~--~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~~~l~ 277 (580)
+++|+|.+...... + +-+... +.|.+.++||++. .|.-. +.+.+.-++..+.+.
T Consensus 2 FISDlHL~~~~p~~t~~fl~Fl~~~a~~ad~lyilGDifd--~w~g~------------------~~~~~~~~~V~~~l~ 61 (237)
T COG2908 2 FISDLHLGPKRPALTAFFLDFLREEAAQADALYILGDIFD--GWIGD------------------DEPPQLHRQVAQKLL 61 (237)
T ss_pred eeeccccCCCCcHHHHHHHHHHHhccccCcEEEEechhhh--hhhcC------------------CcccHHHHHHHHHHH
Confidence 68999998554322 2 223333 4499999999994 34211 001112223333343
Q ss_pred hhc-cCCCeEEecCCCCCCCCcccccHHHHHhhcC-CCCCCCCCCCcceEEEEeCcEEEEEEcCcccCCCcHHHHHHHHH
Q 008029 278 PLT-SRVPMMVIEGNHEIEPQVAGITFKSYLTRFA-VPSEESGSNSNFYYSFNAGGVHFIMLGAYVDYNSTGAQYAWLKE 355 (580)
Q Consensus 278 ~l~-~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~-~P~~~~~~~~~~yYsfd~G~v~fI~Ldt~~~~~~~~~Q~~WLe~ 355 (580)
.+. ..+|++.++||||..- ...+...+. +- ..+.+--+++-|-+++.+-.-. ......++.|+..
T Consensus 62 ~~a~~G~~v~~i~GN~Dfll------~~~f~~~~g~~~------l~~~~~~~~l~g~~~Ll~HGD~-f~t~~~~y~~~r~ 128 (237)
T COG2908 62 RLARKGTRVYYIHGNHDFLL------GKRFAQEAGGMT------LLPDPIVLDLYGKRILLAHGDT-FCTDDRAYQWFRY 128 (237)
T ss_pred HHHhcCCeEEEecCchHHHH------HHHHHhhcCceE------EcCcceeeeecCcEEEEEeCCc-ccchHHHHHHHHH
Confidence 443 5699999999999631 122333332 10 0112233444444555543311 2233455555544
Q ss_pred HHHhccCCCCCeEE-EEeCCCCc-----------cC--CCCCcch----hHHHHHHHHHHHHhcCCcEEEEccccCceeE
Q 008029 356 DLHKLDRTVTPWLA-AAWHPPWY-----------NS--YSSHYQE----FECMRQEMEALLYQYGVDIVFSGHVHAYERM 417 (580)
Q Consensus 356 ~L~~~~r~~~pwvI-v~~H~P~y-----------~s--~~~~~~~----~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR~ 417 (580)
.... +|.. ++.+.|.. .+ .....+. -+.+.+...+.+++++||.+++||+|.-.-.
T Consensus 129 ~~~~------~~~~~lflnl~l~~R~ri~~k~r~~s~~~k~~~~~~~~i~d~~~~~v~~~~~~~~vd~vI~GH~Hr~ai~ 202 (237)
T COG2908 129 KVHW------AWLQLLFLNLPLRVRRRIAYKIRSLSSWAKKKVKKAVNIMDVNPAAVADEARRHGVDGVIHGHTHRPAIH 202 (237)
T ss_pred Hccc------HHHHHHHHHhHHHHHHHHHHHHHHhhHHhHHhhhhHHHHHHhhHHHHHHHHHHcCCCEEEecCcccHhhc
Confidence 3221 1111 11122211 11 0000001 1223567778899999999999999975543
Q ss_pred eeccccccCCCCcEEEEeCCCC
Q 008029 418 NRVYNYTLDACGPVYITVGDGG 439 (580)
Q Consensus 418 ~pv~n~~~~~~G~vyIv~G~gG 439 (580)
+-.+..||+.|+..
T Consensus 203 --------~i~~~~yi~lGdW~ 216 (237)
T COG2908 203 --------NIPGITYINLGDWV 216 (237)
T ss_pred --------cCCCceEEecCcch
Confidence 24569999999988
|
|
| >TIGR00282 metallophosphoesterase, MG_246/BB_0505 family | Back alignment and domain information |
|---|
Probab=98.10 E-value=0.00021 Score=72.77 Aligned_cols=193 Identities=18% Similarity=0.187 Sum_probs=106.0
Q ss_pred eEEEEEcccCCCCCh---HHHHHHHHH-CCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHHHh
Q 008029 200 HRIAVIGDLGLTSNS---STTVDHLIQ-NDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRF 275 (580)
Q Consensus 200 ~rfav~gD~g~~~~~---~~~l~~i~~-~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~~~ 275 (580)
+||+++||.=..... ...+.++.+ .++||++..||++-.. .+.+ ....+.
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG-------~Gi~-------------------~~~~~~ 54 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHG-------KGLT-------------------LKIYEF 54 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCC-------CCCC-------------------HHHHHH
Confidence 589999998644222 233444443 4789999999998321 1110 111222
Q ss_pred hhhhccCCCeEEecCCCCCCCCcccccHHHHHh---hcCCCCCCC-CCCCcceEEEEeCcEEEEEEcC--cccCCC--cH
Q 008029 276 MEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLT---RFAVPSEES-GSNSNFYYSFNAGGVHFIMLGA--YVDYNS--TG 347 (580)
Q Consensus 276 l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~---~f~~P~~~~-~~~~~~yYsfd~G~v~fI~Ldt--~~~~~~--~~ 347 (580)
|.. ..+-++.+ |||++.... ...+.. +.--|.+-+ +..+..|..++.++.++-+++- ...... ..
T Consensus 55 L~~--~GvDviT~-GNH~~Dkge----~~~~i~~~~~~lrpanyp~~~pG~g~~i~~~nG~kiaVinl~G~~fm~~~~~~ 127 (266)
T TIGR00282 55 LKQ--SGVNYITM-GNHTWFQKL----ILDVVINQKDLVRPLNFDTSFAGKGSLVFEFNGAKIAVTNLQGTSVNLPFKTT 127 (266)
T ss_pred HHh--cCCCEEEc-cchhccCcH----HHHHHhccccccccCCCCCCCCCCCcEEEEECCEEEEEEECCCcccCCccccC
Confidence 322 25555555 999996431 111111 111122211 1223346667888766555542 211111 12
Q ss_pred HHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEEccccCceeEeeccccccCC
Q 008029 348 AQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDA 427 (580)
Q Consensus 348 ~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR~~pv~n~~~~~ 427 (580)
.-++-+++.+++.+. +++.+||.+|.-. +. .+.....+.+.+|++|+.-|+|...--.+ +-|
T Consensus 128 ~Pf~~~d~~i~~lk~-~~d~IIVd~Haea-----------ts-EK~a~~~~ldg~vsaVvGtHtHV~TaD~~-----il~ 189 (266)
T TIGR00282 128 NPFKVLKELINMLKK-DCDLIFVDFHAET-----------TS-EKNAFGMAFDGYVTAVVGTHTHVPTADLR-----ILP 189 (266)
T ss_pred CHHHHHHHHHHhhhc-CCCEEEEEeCCCC-----------HH-HHHHHHHHhCCCccEEEeCCCCCCCCcce-----eCC
Confidence 223345555555432 4678999999742 11 13446677788999999999996432222 237
Q ss_pred CCcEEEEe-CCCCcccc
Q 008029 428 CGPVYITV-GDGGNIEQ 443 (580)
Q Consensus 428 ~G~vyIv~-G~gG~~e~ 443 (580)
+|+.||+- |.-|...+
T Consensus 190 ~gtayitD~Gm~G~~~s 206 (266)
T TIGR00282 190 KGTAYITDVGMTGPFGS 206 (266)
T ss_pred CCCEEEecCCcccCccc
Confidence 89999974 77776543
|
A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase. |
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.07 E-value=0.00011 Score=89.76 Aligned_cols=184 Identities=19% Similarity=0.182 Sum_probs=97.5
Q ss_pred CCeEEEEEcccCCCCC-h---HHHHHHHHHCCCCEEEE-cccccccccccccCCCCCcccccCCCCCccccccHHHHHHH
Q 008029 198 YPHRIAVIGDLGLTSN-S---STTVDHLIQNDPSLILM-VGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGW 272 (580)
Q Consensus 198 ~~~rfav~gD~g~~~~-~---~~~l~~i~~~~pDfvl~-~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~ 272 (580)
..++|++++|+|.... . ...++++.+.+|+.+++ +||++..... ... .++...
T Consensus 659 ~~l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~--------------------~~~--~~g~~~ 716 (1163)
T PRK09419 659 WELTILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLY--------------------SNL--LKGLPV 716 (1163)
T ss_pred eEEEEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcch--------------------hhh--cCChHH
Confidence 4699999999996532 2 33456666678887765 9999853211 000 011223
Q ss_pred HHhhhhhccCCCeEEecCCCCCCCCcccccHHHHHhhcC------------CCC---C----CCCC---CCcceEEEEeC
Q 008029 273 GRFMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFA------------VPS---E----ESGS---NSNFYYSFNAG 330 (580)
Q Consensus 273 ~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~------------~P~---~----~~~~---~~~~yYsfd~G 330 (580)
.+.|+.+ -.-+.++||||+.... ..+..+..... +|- | ..+. .-..|.-++.+
T Consensus 717 ~~~ln~l---g~d~~~~GNHEfd~g~--~~l~~~l~~~~~~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~I~e~~ 791 (1163)
T PRK09419 717 LKMMKEM---GYDASTFGNHEFDWGP--DVLPDWLKGGGDPKNRHQFEKPDFPFVASNIYVKKTGKLVSWAKPYILVEVN 791 (1163)
T ss_pred HHHHhCc---CCCEEEecccccccCh--HHHHHHHHhcccccccccccCCCCCEEEEEEEeCCCCccccccCCEEEEEEC
Confidence 3444433 2235699999986432 23333332211 121 0 0111 12346667888
Q ss_pred cEE--EEEEcCcc-cC----C-----CcHHHHHHHHHHHHhcc-CCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHH
Q 008029 331 GVH--FIMLGAYV-DY----N-----STGAQYAWLKEDLHKLD-RTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEAL 397 (580)
Q Consensus 331 ~v~--fI~Ldt~~-~~----~-----~~~~Q~~WLe~~L~~~~-r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~L 397 (580)
+++ ||.+-+.. .. . ......+.+++..++.+ ..+...+|++.|......... .+ ....+|
T Consensus 792 G~kIgiiGltt~~~~~~~~p~~~~~l~f~d~~e~~~~~v~~Lr~~~~~D~VV~LsH~G~~~d~~~--~~-----~~~~~l 864 (1163)
T PRK09419 792 GKKVGFIGLTTPETAYKTSPGNVKNLEFKDPAEAAKKWVKELKEKEKVDAIIALTHLGSNQDRTT--GE-----ITGLEL 864 (1163)
T ss_pred CEEEEEEEecccccccccCCCCcCCcEEcCHHHHHHHHHHHHHhhcCCCEEEEEecCCccccccc--cc-----cHHHHH
Confidence 755 55554321 00 0 01223344555444443 246778999999986543211 11 123344
Q ss_pred HHhc-CCcEEEEccccCce
Q 008029 398 LYQY-GVDIVFSGHVHAYE 415 (580)
Q Consensus 398 l~ky-~VdlvlsGH~H~ye 415 (580)
.++. +||++|.||.|...
T Consensus 865 A~~v~gIDvIigGHsH~~~ 883 (1163)
T PRK09419 865 AKKVKGVDAIISAHTHTLV 883 (1163)
T ss_pred HHhCCCCCEEEeCCCCccc
Confidence 4443 79999999999754
|
|
| >KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=98.06 E-value=3.2e-05 Score=82.15 Aligned_cols=115 Identities=17% Similarity=0.274 Sum_probs=72.5
Q ss_pred CeEEEEEcccCCCCCh--------------H----HHHHHHH-HCCCCEEEEcccccccccccccCCCCCcccccCCCCC
Q 008029 199 PHRIAVIGDLGLTSNS--------------S----TTVDHLI-QNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDA 259 (580)
Q Consensus 199 ~~rfav~gD~g~~~~~--------------~----~~l~~i~-~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~ 259 (580)
++|++.++|.|.-.+. . .....+. ..+||.++++||+.++..+..
T Consensus 48 ~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~---------------- 111 (410)
T KOG3662|consen 48 STKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWAG---------------- 111 (410)
T ss_pred ceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccccCccCC----------------
Confidence 6899999999875421 1 1111111 259999999999997543322
Q ss_pred ccccccHHHHHHHHHhhhhhc---cCCCeEEecCCCCCCCCccc--ccHHHHHhhcCCCCCCCCCCCcceEEEEeCcEEE
Q 008029 260 PIRETYQPRWDGWGRFMEPLT---SRVPMMVIEGNHEIEPQVAG--ITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHF 334 (580)
Q Consensus 260 p~~e~y~~~wd~~~~~l~~l~---~~vP~~~v~GNHD~~~~~~~--~~f~~y~~~f~~P~~~~~~~~~~yYsfd~G~v~f 334 (580)
+++|.+-.+.++.+. ..+|.+.++||||++..... ..-..|.+.| ++...+|+.|+..|
T Consensus 112 ------~eEf~~~~~RfkkIf~~k~~~~~~~i~GNhDIGf~~~~~~~~i~Rfe~~f----------g~~~r~f~v~~~tf 175 (410)
T KOG3662|consen 112 ------DEEFKKRYERFKKIFGRKGNIKVIYIAGNHDIGFGNELIPEWIDRFESVF----------GPTERRFDVGNLTF 175 (410)
T ss_pred ------hHHHHHHHHHHHHhhCCCCCCeeEEeCCccccccccccchhHHHHHHHhh----------cchhhhhccCCcee
Confidence 134443333333332 57999999999999754321 1123344444 23557899999999
Q ss_pred EEEcCcccCCC
Q 008029 335 IMLGAYVDYNS 345 (580)
Q Consensus 335 I~Ldt~~~~~~ 345 (580)
+++|++.....
T Consensus 176 ~~~d~~~ls~~ 186 (410)
T KOG3662|consen 176 VMFDSNALSGN 186 (410)
T ss_pred EEeeehhhcCC
Confidence 99998754433
|
|
| >TIGR00619 sbcd exonuclease SbcD | Back alignment and domain information |
|---|
Probab=97.98 E-value=1.5e-05 Score=80.93 Aligned_cols=73 Identities=22% Similarity=0.384 Sum_probs=48.3
Q ss_pred eEEEEEcccCCCCCh-------------HHHHHHHHHCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccH
Q 008029 200 HRIAVIGDLGLTSNS-------------STTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQ 266 (580)
Q Consensus 200 ~rfav~gD~g~~~~~-------------~~~l~~i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~ 266 (580)
+||++++|+|.+... ...++.+.+.++|+|+++||+++... | ..
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~-------------------p--~~-- 57 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTAN-------------------P--PA-- 57 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCC-------------------C--CH--
Confidence 589999999987431 12344445679999999999996421 0 00
Q ss_pred HHHHHHHHhhhhhcc-C-CCeEEecCCCCCC
Q 008029 267 PRWDGWGRFMEPLTS-R-VPMMVIEGNHEIE 295 (580)
Q Consensus 267 ~~wd~~~~~l~~l~~-~-vP~~~v~GNHD~~ 295 (580)
.....+.+.++.+.. . +|+++++||||..
T Consensus 58 ~~~~~~~~~l~~l~~~~~i~v~~i~GNHD~~ 88 (253)
T TIGR00619 58 EAQELFNAFFRNLSDANPIPIVVISGNHDSA 88 (253)
T ss_pred HHHHHHHHHHHHHHhcCCceEEEEccCCCCh
Confidence 112334445555442 3 8999999999975
|
This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). |
| >cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.00018 Score=72.46 Aligned_cols=198 Identities=19% Similarity=0.211 Sum_probs=97.8
Q ss_pred EEEcccCCCCCh--H----HHHHHHHHC-----CCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHH
Q 008029 203 AVIGDLGLTSNS--S----TTVDHLIQN-----DPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDG 271 (580)
Q Consensus 203 av~gD~g~~~~~--~----~~l~~i~~~-----~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~ 271 (580)
++++|+|.+... . ..++.+... ++|.++++||++........ .. .. ...+.....+..
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~--~~-~~--------~~~~~~~~~~~~ 70 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPG--QE-EE--------LEILDIYEQYEE 70 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCc--ch-hh--------hhhhhHHHHHHH
Confidence 679999986432 1 223333333 56999999999964210000 00 00 000111223555
Q ss_pred HHHhhhhhccCCCeEEecCCCCCCCCcc--cccHHHHHhhcCCCCCCCCCCCcceEEEEeCcEEEEEEcCcc--c---C-
Q 008029 272 WGRFMEPLTSRVPMMVIEGNHEIEPQVA--GITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYV--D---Y- 343 (580)
Q Consensus 272 ~~~~l~~l~~~vP~~~v~GNHD~~~~~~--~~~f~~y~~~f~~P~~~~~~~~~~yYsfd~G~v~fI~Ldt~~--~---~- 343 (580)
+.+.++.+.+.+|+++++||||.....- ......+...+. +.+ ..-..+. +.+.+++.+|+...... + +
T Consensus 71 ~~~~l~~L~~~~~v~~ipGNHD~~~~~~pq~~l~~~l~~~~~-~~~-v~~l~Np-~~~~~~g~~i~~~~G~~~~d~~~~~ 147 (243)
T cd07386 71 AAEYLSDVPSHIKIIIIPGNHDAVRQAEPQPALPEEIRKLFL-PGN-VEFVSNP-ALVKIHGVDVLIYHGRSIDDVVKLI 147 (243)
T ss_pred HHHHHHhcccCCeEEEeCCCCCcccccCCCCCccHHHHhhcC-CCc-eEEeCCC-CEEEECCEEEEEECCCCHHHHHHhC
Confidence 6777788877899999999999853211 111223333221 100 0001122 35777888877643210 0 0
Q ss_pred --CCcHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEEccccCceeEeecc
Q 008029 344 --NSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVY 421 (580)
Q Consensus 344 --~~~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR~~pv~ 421 (580)
.....-.++|+..|.+.. -.|.. -.-.|.+... .++ +..+...+++|+||.|.+....
T Consensus 148 ~~~~~~~~~~~~~~~l~~~h--l~P~~--~~~~~~~~~~-~~~------------~~~~~~p~vii~Gh~h~~~~~~--- 207 (243)
T cd07386 148 PGLSYDKPGKAMEELLKRRH--LAPIY--GGRTPIAPEP-EDY------------LVIDEVPDILHTGHVHVYGVGV--- 207 (243)
T ss_pred CCCCcccHHHHHHHHHhhcc--cCCCC--CCCEeeCCCC-CCC------------EEecCCCCEEEECCCCchHhEE---
Confidence 112233566666665521 11100 0001111100 000 1112367899999999976653
Q ss_pred ccccCCCCcEEEEeCCCC
Q 008029 422 NYTLDACGPVYITVGDGG 439 (580)
Q Consensus 422 n~~~~~~G~vyIv~G~gG 439 (580)
.+|..+|..|+--
T Consensus 208 -----~~~~~~vn~Gsf~ 220 (243)
T cd07386 208 -----YRGVLLVNSGTWQ 220 (243)
T ss_pred -----ECCEEEEECCCCc
Confidence 2478888888744
|
The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera |
| >cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00039 Score=71.88 Aligned_cols=187 Identities=21% Similarity=0.139 Sum_probs=90.0
Q ss_pred eEEEEEcccCCCCC-----------hHHHHHHHHHC----CC-CEEEEcccccccccccccCCCCCcccccCCCCCcccc
Q 008029 200 HRIAVIGDLGLTSN-----------SSTTVDHLIQN----DP-SLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRE 263 (580)
Q Consensus 200 ~rfav~gD~g~~~~-----------~~~~l~~i~~~----~p-Dfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e 263 (580)
++|+..+|+|.... ....++++.+. ++ -+++.+||+...... ..
T Consensus 1 ltIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~--------------------~~ 60 (285)
T cd07405 1 ITILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPE--------------------SD 60 (285)
T ss_pred CEEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchh--------------------HH
Confidence 47889999987521 12345555432 33 488899999843211 00
Q ss_pred ccHHHHHHHHHhhhhhccCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCC------CC-CCCcceEEEEeCcEEE--
Q 008029 264 TYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEE------SG-SNSNFYYSFNAGGVHF-- 334 (580)
Q Consensus 264 ~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~------~~-~~~~~yYsfd~G~v~f-- 334 (580)
.+ +.....+.|+.+ ..-. .++||||+.... ..+........+|.-. .+ .....|.-++.+++++
T Consensus 61 ~~--~g~~~~~~~n~~--g~Da-~~~GNHEfD~G~--~~L~~~~~~~~fp~l~aNv~~~~g~~~~~p~~i~~~~G~kIgv 133 (285)
T cd07405 61 LQ--DAEPDFRGMNLV--GYDA-MAVGNHEFDNPL--EVLRQQMKWANFPLLSANIYQESGERLFKPYALFDLGGLKIAV 133 (285)
T ss_pred hc--CcchHHHHHHhh--CCcE-EeecccccccCH--HHHHHHHhhCCCCEEEEEEEecCCCCccCCeEEEEECCEEEEE
Confidence 00 011122344443 3333 466999996432 2233333322233210 01 1123466777887664
Q ss_pred EEEcCccc-C--C-------CcHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCc
Q 008029 335 IMLGAYVD-Y--N-------STGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVD 404 (580)
Q Consensus 335 I~Ldt~~~-~--~-------~~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~Vd 404 (580)
|.+-+... . . ......+=+++.+++.+..+...+|++.|-............. ....+.+.+...++|
T Consensus 134 iG~t~~~~~~~~~~~~~~~~~f~d~~~~~~~~v~~lk~~~~D~VI~lsH~G~~~~~~~~~~~~--~~~~lA~~~~~~giD 211 (285)
T cd07405 134 IGLTTDDTAKIGNPAYFEGIEFRPPIHEAKEVVPELKQEKPDIVIAATHMGHYDNGEHGSNAP--GDVEMARALPAGGLD 211 (285)
T ss_pred EEecccccccccCcCCcCCcEEcCHHHHHHHHHHHHHHcCCCEEEEEecccccCCccccccCc--hHHHHHHhcCCCCCC
Confidence 44433211 0 0 0111222233333333223567899999988753321100000 012233333235899
Q ss_pred EEEEccccCce
Q 008029 405 IVFSGHVHAYE 415 (580)
Q Consensus 405 lvlsGH~H~ye 415 (580)
++|.||.|...
T Consensus 212 ~IigGHsH~~~ 222 (285)
T cd07405 212 LIVGGHSQDPV 222 (285)
T ss_pred EEEeCCCCccc
Confidence 99999999854
|
UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs |
| >cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.85 E-value=1.8e-05 Score=77.77 Aligned_cols=38 Identities=24% Similarity=0.233 Sum_probs=25.3
Q ss_pred EEEEEcccCCCCCh-HHHHHHHHH-CCCCEEEEccccccc
Q 008029 201 RIAVIGDLGLTSNS-STTVDHLIQ-NDPSLILMVGDLTYA 238 (580)
Q Consensus 201 rfav~gD~g~~~~~-~~~l~~i~~-~~pDfvl~~GDl~Y~ 238 (580)
||+++||+|..... .++++.+.. .++|.++++||+++.
T Consensus 2 ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~ 41 (207)
T cd07424 2 RDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLIDR 41 (207)
T ss_pred CEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccC
Confidence 68999999965322 122232221 368999999999963
|
PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all |
| >PHA02546 47 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
Probab=97.82 E-value=4.5e-05 Score=80.84 Aligned_cols=74 Identities=16% Similarity=0.231 Sum_probs=46.5
Q ss_pred eEEEEEcccCCCCCh-------------HHHHHHHHHCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccH
Q 008029 200 HRIAVIGDLGLTSNS-------------STTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQ 266 (580)
Q Consensus 200 ~rfav~gD~g~~~~~-------------~~~l~~i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~ 266 (580)
+||++++|+|.+... ...++.+.+++||+||++||+.+.... +..
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~------------------~~~---- 58 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKA------------------ITQ---- 58 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCC------------------CCH----
Confidence 589999999987431 123344456899999999999854210 000
Q ss_pred HHHHHHHH-hhhhhc-cCCCeEEecCCCCCC
Q 008029 267 PRWDGWGR-FMEPLT-SRVPMMVIEGNHEIE 295 (580)
Q Consensus 267 ~~wd~~~~-~l~~l~-~~vP~~~v~GNHD~~ 295 (580)
.......+ +++.+. ..+|+++++||||..
T Consensus 59 ~~~~~~~~~l~~~L~~~gi~v~~I~GNHD~~ 89 (340)
T PHA02546 59 NTMNFVREKIFDLLKEAGITLHVLVGNHDMY 89 (340)
T ss_pred HHHHHHHHHHHHHHHHCCCeEEEEccCCCcc
Confidence 11111112 233332 479999999999974
|
|
| >PRK10966 exonuclease subunit SbcD; Provisional | Back alignment and domain information |
|---|
Probab=97.81 E-value=4.6e-05 Score=82.60 Aligned_cols=73 Identities=23% Similarity=0.411 Sum_probs=46.8
Q ss_pred eEEEEEcccCCCCCh-------------HHHHHHHHHCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccH
Q 008029 200 HRIAVIGDLGLTSNS-------------STTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQ 266 (580)
Q Consensus 200 ~rfav~gD~g~~~~~-------------~~~l~~i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~ 266 (580)
+||++++|+|.+... ...++.+.+.+||+||++||+.+.. . | ..+
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~-------~------------p--~~~- 58 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTG-------S------------P--PSY- 58 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCC-------C------------C--cHH-
Confidence 589999999987321 1233444568999999999998531 1 0 001
Q ss_pred HHHHHHHHhhhhhc-cCCCeEEecCCCCCC
Q 008029 267 PRWDGWGRFMEPLT-SRVPMMVIEGNHEIE 295 (580)
Q Consensus 267 ~~wd~~~~~l~~l~-~~vP~~~v~GNHD~~ 295 (580)
....+.+++..+. ..+|+++++||||..
T Consensus 59 -a~~~~~~~l~~L~~~~~~v~~I~GNHD~~ 87 (407)
T PRK10966 59 -ARELYNRFVVNLQQTGCQLVVLAGNHDSV 87 (407)
T ss_pred -HHHHHHHHHHHHHhcCCcEEEEcCCCCCh
Confidence 1122233333333 368999999999975
|
|
| >cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.78 E-value=5.2e-05 Score=72.02 Aligned_cols=63 Identities=14% Similarity=0.236 Sum_probs=38.6
Q ss_pred EEEcccCCCCCh----------------HHHHHHHHH--CCCCEEEEcccccccccccccCCCCCcccccCCCCCccccc
Q 008029 203 AVIGDLGLTSNS----------------STTVDHLIQ--NDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRET 264 (580)
Q Consensus 203 av~gD~g~~~~~----------------~~~l~~i~~--~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~ 264 (580)
.+++|+|.+... ...++.+.+ .++|.|+++||++... .
T Consensus 2 ~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~-------~----------------- 57 (168)
T cd07390 2 YFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGG-------K----------------- 57 (168)
T ss_pred eEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCC-------C-----------------
Confidence 367888887532 122333333 2689999999999531 1
Q ss_pred cHHHHHHHHHhhhhhccCCCeEEecCCCCCC
Q 008029 265 YQPRWDGWGRFMEPLTSRVPMMVIEGNHEIE 295 (580)
Q Consensus 265 y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~ 295 (580)
...+ .+.++.+ ..|++.++||||..
T Consensus 58 -~~~~---~~~l~~~--~~~~~~v~GNHD~~ 82 (168)
T cd07390 58 -AGTE---LELLSRL--NGRKHLIKGNHDSS 82 (168)
T ss_pred -hHHH---HHHHHhC--CCCeEEEeCCCCch
Confidence 0111 2333333 46899999999964
|
This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d |
| >COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00087 Score=75.10 Aligned_cols=185 Identities=19% Similarity=0.136 Sum_probs=101.8
Q ss_pred CCeEEEEEcccCCCCC------------h----HHHHHHHHHC-CCCEEEEcccccccccccccCCCCCcccccCCCCCc
Q 008029 198 YPHRIAVIGDLGLTSN------------S----STTVDHLIQN-DPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAP 260 (580)
Q Consensus 198 ~~~rfav~gD~g~~~~------------~----~~~l~~i~~~-~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p 260 (580)
..++|+...|+|.... . ...++++.+. +..++|.+||+...+...+
T Consensus 25 ~~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~----------------- 87 (517)
T COG0737 25 VKLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSD----------------- 87 (517)
T ss_pred eeEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccc-----------------
Confidence 4799999999997633 1 1234444443 4468899999996432100
Q ss_pred cccccHHHHHHHHHhhhhhccCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCC------C---CCCCCcceEEEEeCc
Q 008029 261 IRETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSE------E---SGSNSNFYYSFNAGG 331 (580)
Q Consensus 261 ~~e~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~------~---~~~~~~~yYsfd~G~ 331 (580)
+........+.|+.+ -.=..+.||||+... .+.+..+.....+|.- . .....+.|.-++.++
T Consensus 88 ----~~~~g~~~~~~mN~m---~yDa~tiGNHEFd~g--~~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~Py~I~~~~g 158 (517)
T COG0737 88 ----YLTKGEPTVDLLNAL---GYDAMTLGNHEFDYG--LEALARLLDEAKFPVLSANVYDKNSTGPPFFKPYAIKEVGG 158 (517)
T ss_pred ----cccCCChHHHHHhhc---CCcEEeecccccccC--HHHHHHHHhccCCceEEeeeEecCCCCccCcCCeEEEecCC
Confidence 001112223444433 122567899999643 2334555555555521 1 112335788889987
Q ss_pred EE--EEEEcCcc--cC---C-----CcHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHH
Q 008029 332 VH--FIMLGAYV--DY---N-----STGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLY 399 (580)
Q Consensus 332 v~--fI~Ldt~~--~~---~-----~~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ 399 (580)
++ +|.+.+.. .+ . ......+++++.+.+.+.++..-+|++.|-+............ .......
T Consensus 159 ~KIgiIG~~~~~~~~~~~~~~~~~~~f~d~~e~~~~~i~elk~~~vD~iI~LsH~G~~~d~~~~~~~~-~~~~~~~---- 233 (517)
T COG0737 159 VKIGIIGLTTPTIPTWEKPNAIEGVTFRDPIEAAKKYIPELKGEGVDVIIALSHLGIEDDLELASEVP-GDVDVAV---- 233 (517)
T ss_pred eEEEEEEecCCcccccccccccCCcEEcCHHHHHHHHHHHHHhcCCCEEEEEeccCcCcccccccccc-ccccccc----
Confidence 55 55555311 11 1 1234567777777776544467899999998765432111100 0000000
Q ss_pred hcCCcEEEEccccCc
Q 008029 400 QYGVDIVFSGHVHAY 414 (580)
Q Consensus 400 ky~VdlvlsGH~H~y 414 (580)
.++|+++.||.|.+
T Consensus 234 -~~iD~i~~GH~H~~ 247 (517)
T COG0737 234 -PGIDLIIGGHSHTV 247 (517)
T ss_pred -cCcceEeccCCccc
Confidence 44999999999964
|
|
| >cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.67 E-value=5.9e-05 Score=74.33 Aligned_cols=23 Identities=17% Similarity=0.341 Sum_probs=19.8
Q ss_pred HHHHHHHhcCCcEEEEccccCce
Q 008029 393 EMEALLYQYGVDIVFSGHVHAYE 415 (580)
Q Consensus 393 ~l~~Ll~ky~VdlvlsGH~H~ye 415 (580)
.+..+|..++.++++.||+|...
T Consensus 158 ~~~~~l~~~~~~~iv~GHTh~~~ 180 (208)
T cd07425 158 HLDKVLERLGAKRMVVGHTPQEG 180 (208)
T ss_pred HHHHHHHHcCCCeEEEcCeeeec
Confidence 57788899999999999999754
|
This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal |
| >PRK09968 serine/threonine-specific protein phosphatase 2; Provisional | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00014 Score=72.11 Aligned_cols=38 Identities=24% Similarity=0.312 Sum_probs=26.8
Q ss_pred EEEEEcccCCCCCh-HHHHHHHH-HCCCCEEEEccccccc
Q 008029 201 RIAVIGDLGLTSNS-STTVDHLI-QNDPSLILMVGDLTYA 238 (580)
Q Consensus 201 rfav~gD~g~~~~~-~~~l~~i~-~~~pDfvl~~GDl~Y~ 238 (580)
|++++||+|..... .++++.+. ..+.|.++++||+++.
T Consensus 16 ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdr 55 (218)
T PRK09968 16 HIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDR 55 (218)
T ss_pred eEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCC
Confidence 89999999976432 22333332 2468999999999964
|
|
| >TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.0013 Score=74.26 Aligned_cols=113 Identities=16% Similarity=0.182 Sum_probs=59.2
Q ss_pred EEecCCCCCCCCcccccHHHHHhhcCCCCCC------CC----CCCcceEEEEeCc--EEEEEEcCccc-C---CCc---
Q 008029 286 MVIEGNHEIEPQVAGITFKSYLTRFAVPSEE------SG----SNSNFYYSFNAGG--VHFIMLGAYVD-Y---NST--- 346 (580)
Q Consensus 286 ~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~------~~----~~~~~yYsfd~G~--v~fI~Ldt~~~-~---~~~--- 346 (580)
+.++||||+... ...+..+.....+|--. .. ..-..|.-++.++ +-||.|.+... . ...
T Consensus 85 a~~lGNHEFd~G--~~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~p~~i~~~~g~kIgiiGl~~~~~~~~~~~~~~~~ 162 (550)
T TIGR01530 85 FFTLGNHEFDAG--NEGLKEFLEPLEIPVLSANVIPDAASILHGKWKPSAIFERAGEKIAIIGLDTVKKTVESSSPGKDI 162 (550)
T ss_pred EEEeccccccCC--HHHHHHHHHhCCCCEEEEeeecCCCcccccCcCceEEEEECCeEEEEEEeecCcccccccCCCCce
Confidence 677999998643 23444444444444211 00 1123566778887 55677754211 0 000
Q ss_pred --HHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhc-CCcEEEEccccCce
Q 008029 347 --GAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQY-GVDIVFSGHVHAYE 415 (580)
Q Consensus 347 --~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky-~VdlvlsGH~H~ye 415 (580)
....+=+++..++.++.+...+|++.|..... . ..+.++. +||++|.||+|.+-
T Consensus 163 ~f~d~~~~~~~~v~~Lk~~g~D~II~lsH~g~~~--------d-------~~la~~~~~iD~IigGHsH~~~ 219 (550)
T TIGR01530 163 KFIDEIAAAQIAANALKQQGINKIILLSHAGFEK--------N-------CEIAQKINDIDVIVSGDSHYLL 219 (550)
T ss_pred EECCHHHHHHHHHHHHHhCCCCEEEEEecCCcHH--------H-------HHHHhcCCCCCEEEeCCCCccc
Confidence 11122233333333224567899999975211 0 1233333 79999999999853
|
This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc. |
| >PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00096 Score=75.34 Aligned_cols=185 Identities=18% Similarity=0.124 Sum_probs=91.8
Q ss_pred CCeEEEEEcccCCCCC--------h---HHHHHHHHHC----CC-CEEEEcccccccccccccCCCCCcccccCCCCCcc
Q 008029 198 YPHRIAVIGDLGLTSN--------S---STTVDHLIQN----DP-SLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPI 261 (580)
Q Consensus 198 ~~~rfav~gD~g~~~~--------~---~~~l~~i~~~----~p-Dfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~ 261 (580)
..++|+..+|+|.... . ...++++.+. ++ -++|.+||+......
T Consensus 33 ~~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~-------------------- 92 (551)
T PRK09558 33 YKITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPE-------------------- 92 (551)
T ss_pred eEEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEh--------------------
Confidence 4799999999998632 1 1234444321 33 578899999843211
Q ss_pred ccccHHHHHHHHHhhhhhccCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCC-------CC-CCCcceEEEEeCcEE
Q 008029 262 RETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEE-------SG-SNSNFYYSFNAGGVH 333 (580)
Q Consensus 262 ~e~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~-------~~-~~~~~yYsfd~G~v~ 333 (580)
...+ +.....+.|+.+ ..- +.++||||+.... ..+..+.....+|--. .+ ..-..|.-++.++++
T Consensus 93 s~~~--~g~~~i~~mN~~--g~D-a~tlGNHEFD~G~--~~L~~~~~~a~fp~l~aNv~~~~~g~~~~~py~i~~~~G~k 165 (551)
T PRK09558 93 SDLQ--DAEPDFRGMNLI--GYD-AMAVGNHEFDNPL--SVLRKQEKWAKFPFLSANIYQKSTGERLFKPYAIFDRQGLK 165 (551)
T ss_pred hhhc--CCchhHHHHhcC--CCC-EEcccccccCcCH--HHHHHhhccCCCCEEEEEEEECCCCCcccCCeEEEEECCEE
Confidence 1101 011123344443 333 4557999986432 2333333333333210 01 112346667888755
Q ss_pred --EEEEcCcccC---C-------CcHHHHHHHHHHHHhccC-CCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHh
Q 008029 334 --FIMLGAYVDY---N-------STGAQYAWLKEDLHKLDR-TVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQ 400 (580)
Q Consensus 334 --fI~Ldt~~~~---~-------~~~~Q~~WLe~~L~~~~r-~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~k 400 (580)
||.+-+.... . ......+-+++.+++.+. .+...+|++.|.......... .... .-..|.++
T Consensus 166 IgiiG~~t~~~~~~~~~~~~~~~~f~d~~e~a~~~v~~Lk~~~~~D~IV~LsH~G~~~~~~~~-~~~~----~d~~la~~ 240 (551)
T PRK09558 166 IAVIGLTTEDTAKIGNPEYFTDIEFRDPAEEAKKVIPELKQTEKPDVIIALTHMGHYDDGEHG-SNAP----GDVEMARS 240 (551)
T ss_pred EEEEEEeccccccccCCCCcCCceECCHHHHHHHHHHHHHhccCCCEEEEEeccccccCCccC-CCCc----cHHHHHHh
Confidence 4554332110 0 011122333444443332 457789999998875322110 0000 00233333
Q ss_pred c---CCcEEEEccccCc
Q 008029 401 Y---GVDIVFSGHVHAY 414 (580)
Q Consensus 401 y---~VdlvlsGH~H~y 414 (580)
. +||++|.||.|..
T Consensus 241 ~~~~~IDvIlgGHsH~~ 257 (551)
T PRK09558 241 LPAGGLDMIVGGHSQDP 257 (551)
T ss_pred CCccCceEEEeCCCCcc
Confidence 3 7999999999975
|
|
| >PRK11439 pphA serine/threonine protein phosphatase 1; Provisional | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00011 Score=72.81 Aligned_cols=38 Identities=24% Similarity=0.274 Sum_probs=27.5
Q ss_pred EEEEEcccCCCCCh-HHHHHHHHHC-CCCEEEEccccccc
Q 008029 201 RIAVIGDLGLTSNS-STTVDHLIQN-DPSLILMVGDLTYA 238 (580)
Q Consensus 201 rfav~gD~g~~~~~-~~~l~~i~~~-~pDfvl~~GDl~Y~ 238 (580)
|++++||+|..... .++++++... +.|-++++||+++.
T Consensus 18 ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDr 57 (218)
T PRK11439 18 HIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDR 57 (218)
T ss_pred eEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCC
Confidence 89999999986433 3344444323 57899999999964
|
|
| >cd08162 MPP_PhoA_N Synechococcus sp | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0017 Score=68.03 Aligned_cols=39 Identities=18% Similarity=0.102 Sum_probs=25.9
Q ss_pred CCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhc-CCcEEEEccccCce
Q 008029 363 TVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQY-GVDIVFSGHVHAYE 415 (580)
Q Consensus 363 ~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky-~VdlvlsGH~H~ye 415 (580)
.+..-+|++.|---+. .. ..|.++. +||++|.||+|.+-
T Consensus 206 ~gvD~II~LsH~g~~~-------~d-------~~lA~~v~gIDvIigGHsH~~l 245 (313)
T cd08162 206 QGINKIILLSHLQQIS-------IE-------QALAALLSGVDVIIAGGSNTLL 245 (313)
T ss_pred CCCCEEEEEecccccc-------hH-------HHHHhcCCCCCEEEeCCCCccC
Confidence 4567799999983111 11 1244454 79999999999853
|
strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat |
| >cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00027 Score=67.32 Aligned_cols=70 Identities=23% Similarity=0.433 Sum_probs=42.4
Q ss_pred EEEcccCCCCCh--------------HHHHHH----HHHCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccc
Q 008029 203 AVIGDLGLTSNS--------------STTVDH----LIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRET 264 (580)
Q Consensus 203 av~gD~g~~~~~--------------~~~l~~----i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~ 264 (580)
++++|+|.+... .+++++ +.+.+||.++++||+++.... . .
T Consensus 1 l~isDlHlG~~~~~~~~g~~~p~~~~~~~~~~l~~~~~~~~~d~lii~GDl~~~~~~-----~----------------~ 59 (172)
T cd07391 1 LVVADLHLGKEEELRRRGILLPRGQTEDTLERLDRLIEEYGPERLIILGDLKHSFGG-----L----------------S 59 (172)
T ss_pred CEeEeeccchHHHHHhcCCcCCcccHHHHHHHHHHHHHhcCCCEEEEeCcccccccc-----c----------------C
Confidence 367888887421 123333 345799999999999964210 0 0
Q ss_pred cHHHHHHHHHhhhhhccCCCeEEecCCCCCC
Q 008029 265 YQPRWDGWGRFMEPLTSRVPMMVIEGNHEIE 295 (580)
Q Consensus 265 y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~ 295 (580)
...+.... .+......+|++.++||||..
T Consensus 60 -~~~~~~~~-~~~~~~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 60 -RQEFEEVA-FLRLLAKDVDVILIRGNHDGG 88 (172)
T ss_pred -HHHHHHHH-HHHhccCCCeEEEEcccCccc
Confidence 11222221 233344678999999999974
|
This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro |
| >cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.00089 Score=62.51 Aligned_cols=53 Identities=15% Similarity=-0.038 Sum_probs=32.3
Q ss_pred EEEEeCCCCccCCC-CCcc----hhHHHHHHHHHHHHhcCCcEEEEcccc-CceeEeecc
Q 008029 368 LAAAWHPPWYNSYS-SHYQ----EFECMRQEMEALLYQYGVDIVFSGHVH-AYERMNRVY 421 (580)
Q Consensus 368 vIv~~H~P~y~s~~-~~~~----~~~~~r~~l~~Ll~ky~VdlvlsGH~H-~yeR~~pv~ 421 (580)
-|+++|.|++.... .... ....-...+.+++++.+..+.|+||.| .|||- |-.
T Consensus 71 DILlTh~wP~gi~~~~~~~~~~~~~~~GS~~i~~l~~~lkPrYhf~gh~~~fyer~-Pf~ 129 (150)
T cd07380 71 DILLTSEWPKGISKLSKVPFEETLLICGSDLIAELAKKLKPRYHFAGLEGVFYERE-PYR 129 (150)
T ss_pred CEEECCCCchhhhhhCCCcccccccCCCCHHHHHHHHHcCCCeEeecCCCceEeec-Ccc
Confidence 47777777765421 1000 000113466778888999999999999 56664 443
|
CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site |
| >KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0025 Score=66.02 Aligned_cols=183 Identities=23% Similarity=0.280 Sum_probs=103.3
Q ss_pred eEEEEEcccCCCCC-hHHHHHHHHHC---CCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHHHh
Q 008029 200 HRIAVIGDLGLTSN-SSTTVDHLIQN---DPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRF 275 (580)
Q Consensus 200 ~rfav~gD~g~~~~-~~~~l~~i~~~---~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~~~ 275 (580)
+||+|-|++|..-+ ..+++..+.+. +.|++|.+||+---. |+ . |- ..-.+...|+..-+-|.-.
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavR----n~-~--D~-----~siavPpKy~~m~~F~~YY 68 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVR----NE-Q--DL-----KSIAVPPKYRRMGDFYKYY 68 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhc----ch-h--hc-----ccccCCHHHHHHHHHHHHh
Confidence 58999999998643 35666777665 899999999985221 11 1 11 1112234454332222222
Q ss_pred hhhhccCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCCCCCCCcceE-----EEEeCcEEEEEEcC---cccCCC--
Q 008029 276 MEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSNFYY-----SFNAGGVHFIMLGA---YVDYNS-- 345 (580)
Q Consensus 276 l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yY-----sfd~G~v~fI~Ldt---~~~~~~-- 345 (580)
-..+.+.+|.+++=||||.. .|... +|..+- ...+.|| -.++||+|+-.|.. +.+|..
T Consensus 69 sge~~APVlTIFIGGNHEAs---------nyL~e--LpyGGw-VApNIyYlG~agVv~~~gvRIggiSGI~k~~dy~kgh 136 (456)
T KOG2863|consen 69 SGEIKAPVLTIFIGGNHEAS---------NYLQE--LPYGGW-VAPNIYYLGYAGVVNFGGVRIGGISGIYKEHDYRKGH 136 (456)
T ss_pred CCcccCceeEEEecCchHHH---------HHHHh--cccCce-eccceEEeeecceEEECCEEEeeccchhhhhhcccCC
Confidence 24456789999999999973 23222 233110 1235565 35788999998876 223221
Q ss_pred ---------------cHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHH-----------H------HHH
Q 008029 346 ---------------TGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFEC-----------M------RQE 393 (580)
Q Consensus 346 ---------------~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~-----------~------r~~ 393 (580)
.-.+++ ...|.+. +.|--|+++|.=+.... .+++... + ...
T Consensus 137 ~E~ppyn~stiRsiYHvR~~d--V~~Lkql---k~piDIfLSHDWP~GI~--~yGd~~~LLr~KPFFrqeie~~~LGSp~ 209 (456)
T KOG2863|consen 137 FEWPPYNNSTIRSIYHVRISD--VAKLKQL---KHPIDIFLSHDWPRGIY--YYGDKKQLLRLKPFFRQEIEEGKLGSPA 209 (456)
T ss_pred CCCCCccchhhhhhhhhhhhh--hHHHHhh---cCcceEEeecCCCcchh--hcCCHHHHHhcCcHHHHHHhcCCcCChH
Confidence 111111 1123333 34556778885332211 1111110 1 247
Q ss_pred HHHHHHhcCCcEEEEccccC
Q 008029 394 MEALLYQYGVDIVFSGHVHA 413 (580)
Q Consensus 394 l~~Ll~ky~VdlvlsGH~H~ 413 (580)
+++||++.+...+|+.|.|.
T Consensus 210 ~~eLL~~LkP~yWfsAHLH~ 229 (456)
T KOG2863|consen 210 LEELLEDLKPQYWFSAHLHV 229 (456)
T ss_pred HHHHHHHhCcchhhhhhHhh
Confidence 88999999999999999995
|
|
| >PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.016 Score=67.84 Aligned_cols=194 Identities=15% Similarity=0.123 Sum_probs=93.3
Q ss_pred CCeEEEEEcccCCCCC-----------------hHHHHHHHHHCCC-CEEEEcccccccccccccCCCCCcccccCCCCC
Q 008029 198 YPHRIAVIGDLGLTSN-----------------SSTTVDHLIQNDP-SLILMVGDLTYANQYLTTGGKAASCYSCAFPDA 259 (580)
Q Consensus 198 ~~~rfav~gD~g~~~~-----------------~~~~l~~i~~~~p-Dfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~ 259 (580)
..++|+..+|+|.... ....++++.+..+ -++|..||++....+.+ |.+.. .
T Consensus 114 ~~LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~--------~~a~~--~ 183 (814)
T PRK11907 114 VDVRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGT--------YKAIV--D 183 (814)
T ss_pred eEEEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccc--------hhhhc--c
Confidence 4699999999997521 0123455544444 47889999995432100 00000 0
Q ss_pred ccccccHHHHHHHHHhhhhhccCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCC-------CCC-CCcceEEEEe--
Q 008029 260 PIRETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEE-------SGS-NSNFYYSFNA-- 329 (580)
Q Consensus 260 p~~e~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~-------~~~-~~~~yYsfd~-- 329 (580)
++ ++.+-.-..+.|+.+. . =..++||||+... ...+..+.....+|.-. .+. .-..|--++.
T Consensus 184 ~~---~~g~~~P~i~amN~LG--y-DA~tLGNHEFDyG--~d~L~~~l~~a~fPvl~ANV~~~~~~~~~~~PY~I~e~~~ 255 (814)
T PRK11907 184 PV---EEGEQHPMYAALEALG--F-DAGTLGNHEFNYG--LDYLEKVIATANMPIVNANVLDPTTGDFLYTPYTIVTKTF 255 (814)
T ss_pred cc---ccCcchHHHHHHhccC--C-CEEEechhhcccC--HHHHHHHHHhCCCCEEEeeeeecCCCCccCCCeEEEEEEE
Confidence 00 0000011234454442 1 2567899998643 22334444433444311 000 1123444443
Q ss_pred ---Cc------EEEEEEcCcc--cCC--------CcHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHH
Q 008029 330 ---GG------VHFIMLGAYV--DYN--------STGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECM 390 (580)
Q Consensus 330 ---G~------v~fI~Ldt~~--~~~--------~~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~ 390 (580)
++ |-||.+-+.. .+. ....-.+-+++...+.+..+...+|++.|.-+.........+ .
T Consensus 256 ~d~~G~~~~vKIGiIGlvtp~~~~w~~~~l~g~v~f~D~veaa~~~v~~Lr~~GaDvIIaLsH~G~~~d~~~~~~E--n- 332 (814)
T PRK11907 256 TDTEGKKVTLNIGITGIVPPQILNWDKANLEGKVIVRDAVEAVRDIIPTMRAAGADIVLVLSHSGIGDDQYEVGEE--N- 332 (814)
T ss_pred ecCCCcccceEEEEEEeCchhhhhcccccccCCeEECCHHHHHHHHHHHHHhcCCCEEEEEeCCCccccccccccc--c-
Confidence 33 5566654321 010 012233444454444443567889999998764322111111 1
Q ss_pred HHHHHHHHHhcCCcEEEEccccCc
Q 008029 391 RQEMEALLYQYGVDIVFSGHVHAY 414 (580)
Q Consensus 391 r~~l~~Ll~ky~VdlvlsGH~H~y 414 (580)
.-..|..--+||++|.||.|..
T Consensus 333 --~~~~LA~v~GIDaIvgGHsH~~ 354 (814)
T PRK11907 333 --VGYQIASLSGVDAVVTGHSHAE 354 (814)
T ss_pred --hhhHHhcCCCCCEEEECCCCCc
Confidence 1122332348999999999984
|
|
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0077 Score=73.89 Aligned_cols=58 Identities=17% Similarity=0.241 Sum_probs=35.1
Q ss_pred HHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhc-CCcEEEEccccCce
Q 008029 353 LKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQY-GVDIVFSGHVHAYE 415 (580)
Q Consensus 353 Le~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky-~VdlvlsGH~H~ye 415 (580)
+++.+.+.++.+...+|++.|............ .....+|.++. +||+++.||.|...
T Consensus 223 ~~~~v~~lk~~gaDvII~l~H~G~~~~~~~~~~-----en~~~~la~~~~gID~Il~GHsH~~~ 281 (1163)
T PRK09419 223 ANKTIPEMKKGGADVIVALAHSGIESEYQSSGA-----EDSVYDLAEKTKGIDAIVAGHQHGLF 281 (1163)
T ss_pred HHHHHHHHHhcCCCEEEEEeccCcCCCCCCCCc-----chHHHHHHHhCCCCcEEEeCCCcccc
Confidence 333333433356788999999886543221111 12333455443 89999999999864
|
|
| >PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.019 Score=67.03 Aligned_cols=47 Identities=26% Similarity=0.152 Sum_probs=28.7
Q ss_pred CCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhc-CCcEEEEccccCce
Q 008029 363 TVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQY-GVDIVFSGHVHAYE 415 (580)
Q Consensus 363 ~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky-~VdlvlsGH~H~ye 415 (580)
.+...+|++.|......... . .+..+... +.+. +||++|.||+|..-
T Consensus 243 ~GaDvIIaLsH~G~~~d~~~---~--~~ena~~~-l~~v~gID~IlgGHsH~~~ 290 (780)
T PRK09418 243 EGADVIVALAHSGVDKSGYN---V--GMENASYY-LTEVPGVDAVLMGHSHTEV 290 (780)
T ss_pred cCCCEEEEEeccCccccccc---c--cchhhhHH-HhcCCCCCEEEECCCCCcc
Confidence 45778999999876442111 1 01111111 3444 89999999999864
|
|
| >PHA02239 putative protein phosphatase | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0012 Score=66.22 Aligned_cols=39 Identities=21% Similarity=0.244 Sum_probs=27.0
Q ss_pred eEEEEEcccCCCCCh-HHHHHHHHHC--CCCEEEEccccccc
Q 008029 200 HRIAVIGDLGLTSNS-STTVDHLIQN--DPSLILMVGDLTYA 238 (580)
Q Consensus 200 ~rfav~gD~g~~~~~-~~~l~~i~~~--~pDfvl~~GDl~Y~ 238 (580)
+|++++||+|..... .+.++.+... ..|.++++||+++.
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDr 42 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDR 42 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCC
Confidence 478999999965322 3344444332 35999999999964
|
|
| >COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.02 Score=52.93 Aligned_cols=38 Identities=18% Similarity=0.156 Sum_probs=25.0
Q ss_pred EEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEEccccC
Q 008029 368 LAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHA 413 (580)
Q Consensus 368 vIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~ 413 (580)
.|++.|.|.-..... + ........+.++++.+.||.|.
T Consensus 110 ~~~LsHyP~~~~~~~--~------~~~r~~y~~~~~~llIHGH~H~ 147 (186)
T COG4186 110 DVYLSHYPRPGQDHP--G------MESRFDYLRLRVPLLIHGHLHS 147 (186)
T ss_pred EEEEEeCCCCCCCCc--c------hhhhHHHHhccCCeEEeccccc
Confidence 799999996554321 1 1112233455789999999998
|
|
| >PRK00166 apaH diadenosine tetraphosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0017 Score=66.65 Aligned_cols=39 Identities=18% Similarity=0.265 Sum_probs=27.4
Q ss_pred eEEEEEcccCCCCCh-HHHHHHHH-HCCCCEEEEccccccc
Q 008029 200 HRIAVIGDLGLTSNS-STTVDHLI-QNDPSLILMVGDLTYA 238 (580)
Q Consensus 200 ~rfav~gD~g~~~~~-~~~l~~i~-~~~pDfvl~~GDl~Y~ 238 (580)
++++++||+|..... .++++++. +.+.|.++++||+++.
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdr 41 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNR 41 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCC
Confidence 468999999976443 23344442 2368999999999963
|
|
| >TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0036 Score=62.49 Aligned_cols=70 Identities=23% Similarity=0.310 Sum_probs=45.9
Q ss_pred eEEEEEcccCCCCCh--------------HHHHHHHH----HCCCCEEEEcccccccccccccCCCCCcccccCCCCCcc
Q 008029 200 HRIAVIGDLGLTSNS--------------STTVDHLI----QNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPI 261 (580)
Q Consensus 200 ~rfav~gD~g~~~~~--------------~~~l~~i~----~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~ 261 (580)
-+.++++|+|.+... .++++++. +.+||.++++||+.+.... .
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~-------------------~ 75 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKK-------------------G 75 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCC-------------------h
Confidence 357899999997421 13444443 4589999999999964210 0
Q ss_pred ccccHHHHHHHHHhhhhhccCCCeEEecCCCCCC
Q 008029 262 RETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIE 295 (580)
Q Consensus 262 ~e~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~ 295 (580)
..|..+.++++.+ ..+++.++||||..
T Consensus 76 -----~~~~~~~~~l~~~--~~~v~~V~GNHD~~ 102 (225)
T TIGR00024 76 -----LEWRFIREFIEVT--FRDLILIRGNHDAL 102 (225)
T ss_pred -----HHHHHHHHHHHhc--CCcEEEECCCCCCc
Confidence 1234444455444 35999999999963
|
Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal. |
| >PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.066 Score=61.65 Aligned_cols=58 Identities=17% Similarity=0.157 Sum_probs=32.8
Q ss_pred HHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHh-cCCcEEEEccccCc
Q 008029 351 AWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQ-YGVDIVFSGHVHAY 414 (580)
Q Consensus 351 ~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~k-y~VdlvlsGH~H~y 414 (580)
+-+++...+.+..+...+|++.|............+ ..... +.+ -+||+++.||.|..
T Consensus 205 e~a~~~v~~Lk~~gaDvII~LsH~G~~~d~~~~~ae-----n~~~~-l~~v~gID~Il~GHsH~~ 263 (649)
T PRK09420 205 ETARKYVPEMKEKGADIVVAIPHSGISADPYKAMAE-----NSVYY-LSEVPGIDAIMFGHSHAV 263 (649)
T ss_pred HHHHHHHHHHHHcCCCEEEEEecCCcCCCCcccccc-----chhHH-HhcCCCCCEEEeCCCCcc
Confidence 334444444433467889999998764321111111 11112 334 37999999999985
|
|
| >TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.065 Score=61.48 Aligned_cols=46 Identities=24% Similarity=0.156 Sum_probs=28.1
Q ss_pred CCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhc-CCcEEEEccccCc
Q 008029 363 TVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQY-GVDIVFSGHVHAY 414 (580)
Q Consensus 363 ~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky-~VdlvlsGH~H~y 414 (580)
.+...+|++.|........... .+. .. ..|.+. +||+++.||+|..
T Consensus 194 ~gaDvII~LsH~G~~~d~~~~~--~en---~~-~~l~~v~gID~Il~GHsH~~ 240 (626)
T TIGR01390 194 KGADIIVALAHSGISADPYQPG--AEN---SA-YYLTKVPGIDAVLFGHSHAV 240 (626)
T ss_pred cCCCEEEEEeccCcCCCccccc--cch---HH-HHHhcCCCCCEEEcCCCCcc
Confidence 4577899999987654311110 111 11 123443 8999999999984
|
2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a |
| >cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.0034 Score=62.94 Aligned_cols=39 Identities=21% Similarity=0.297 Sum_probs=26.3
Q ss_pred eEEEEEcccCCCCCh-HHHHHHHH---HC-------CCCEEEEccccccc
Q 008029 200 HRIAVIGDLGLTSNS-STTVDHLI---QN-------DPSLILMVGDLTYA 238 (580)
Q Consensus 200 ~rfav~gD~g~~~~~-~~~l~~i~---~~-------~pDfvl~~GDl~Y~ 238 (580)
+||+++||+|..... .++++++. +. +.|.++++||+++.
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDr 50 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDR 50 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCC
Confidence 379999999986433 23444431 11 36899999999964
|
PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp |
| >COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion] | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.0084 Score=60.42 Aligned_cols=142 Identities=19% Similarity=0.303 Sum_probs=88.2
Q ss_pred hhhhccCCCeEEecCCCCCCCCcccc-------cHHHHHhhcCCCCC------C--CCCCCcceEEEEeCcEEEEEEcCc
Q 008029 276 MEPLTSRVPMMVIEGNHEIEPQVAGI-------TFKSYLTRFAVPSE------E--SGSNSNFYYSFNAGGVHFIMLGAY 340 (580)
Q Consensus 276 l~~l~~~vP~~~v~GNHD~~~~~~~~-------~f~~y~~~f~~P~~------~--~~~~~~~yYsfd~G~v~fI~Ldt~ 340 (580)
..++...+|+|+-.||||........ ....|...+.-+.. . +-.....-||++.|++|.+-+-+.
T Consensus 164 vG~~h~H~PvYvGlgnhdldq~gpph~~DWyRrElrdyve~~Hr~~vf~Kppvp~atYd~l~d~ySwdwgglhlvh~hrf 243 (392)
T COG5555 164 VGNIHMHYPVYVGLGNHDLDQKGPPHSLDWYRRELRDYVENYHRSDVFWKPPVPPATYDQLKDRYSWDWGGLHLVHYHRF 243 (392)
T ss_pred CCCceeeeeeEeccCchhhcccCCCCchhHHHHHHHHHHHhhcCcCcccCCCCCcccccccchheeccccceeEEEEeee
Confidence 44555679999999999997443222 22333332222211 0 112334569999999998887654
Q ss_pred ccCCC--cHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcc----------------hhHHHHHHHHHHHHhcC
Q 008029 341 VDYNS--TGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQ----------------EFECMRQEMEALLYQYG 402 (580)
Q Consensus 341 ~~~~~--~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~----------------~~~~~r~~l~~Ll~ky~ 402 (580)
..-.. ...-+-||+.+|........| ++++.|.-+-.-..+.+. .....|.+|...++-|+
T Consensus 244 ~Gd~~~ga~sslpwlk~dl~~~aadgrp-v~LfqhyGwdtfsteawdpAsrT~Dd~Gsgaphww~a~er~all~~lqGYN 322 (392)
T COG5555 244 IGDAEPGANSSLPWLKVDLIYSAADGRP-VYLFQHYGWDTFSTEAWDPASRTLDDTGSGAPHWWPAPERGALLFFLQGYN 322 (392)
T ss_pred ccccCCCccccCcceeccceeeccCCCc-eeehhhhCccceeccccCchhcccccCCCCCCCCCCCCCcchHHHhhcCce
Confidence 32111 233467999999876545555 888888765432111110 01234778999999999
Q ss_pred CcEEEEccccCceeEe
Q 008029 403 VDIVFSGHVHAYERMN 418 (580)
Q Consensus 403 VdlvlsGH~H~yeR~~ 418 (580)
|...+.||.|.+.-.+
T Consensus 323 vvg~fhGhkhd~~may 338 (392)
T COG5555 323 VVGTFHGHKHDFNMAY 338 (392)
T ss_pred eEEeccccccccceee
Confidence 9999999999874443
|
|
| >cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.05 Score=55.30 Aligned_cols=191 Identities=15% Similarity=0.213 Sum_probs=96.3
Q ss_pred EEEEcccCCCCCh------HHHHHHHHH-----------CCCCEEEEcccccccccccccCCCCCcccccCCCCCccccc
Q 008029 202 IAVIGDLGLTSNS------STTVDHLIQ-----------NDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRET 264 (580)
Q Consensus 202 fav~gD~g~~~~~------~~~l~~i~~-----------~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~ 264 (580)
+++++|+|.+.+. +..++.+.. .+..-+|++||.+...+..... ..+ ...+......+.
T Consensus 2 i~~vSgL~ig~~~~~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~---~~~-~~~~~~~~~~~~ 77 (257)
T cd07387 2 IALVSGLGLGGNAESSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDS---QTK-ARYLTKKSSAAS 77 (257)
T ss_pred EEEEcccccCCCccchHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccch---hhh-hhccccccchhh
Confidence 7889999987553 112233321 2345799999999643210000 000 000000001111
Q ss_pred cHHHHHHHHHhhhhhccCCCeEEecCCCCCCCCccc-ccH-HHHHhhcCCCCCCCCCCCcceEEEEeCcEEEEEEcCcc-
Q 008029 265 YQPRWDGWGRFMEPLTSRVPMMVIEGNHEIEPQVAG-ITF-KSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYV- 341 (580)
Q Consensus 265 y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~-~~f-~~y~~~f~~P~~~~~~~~~~yYsfd~G~v~fI~Ldt~~- 341 (580)
+ .+.+.+.+++..+.+.+|+.+.|||||-....-. +.+ ..+..+-.... .-....|- |.|++++++|++.....
T Consensus 78 ~-~~~~~ld~~l~~l~~~i~V~imPG~~Dp~~~~lPQqplh~~lfp~s~~~~-~~~~vtNP-~~~~i~g~~vLgtsGqni 154 (257)
T cd07387 78 V-EAVKELDNFLSQLASSVPVDLMPGEFDPANHSLPQQPLHRCLFPKSSNYS-TLNLVTNP-YEFSIDGVRVLGTSGQNV 154 (257)
T ss_pred H-HHHHHHHHHHHhhhcCCeEEECCCCCCcccccCCCCCCCHHHhhcccccC-CcEEeCCC-eEEEECCEEEEEECCCCH
Confidence 2 3456677788888899999999999998643221 111 11110000000 00111222 56999999999988642
Q ss_pred ----cCCCcHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCC--cchhHHHHHHHHHHHHhcCCcEEEEccccCce
Q 008029 342 ----DYNSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSH--YQEFECMRQEMEALLYQYGVDIVFSGHVHAYE 415 (580)
Q Consensus 342 ----~~~~~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~--~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~ye 415 (580)
.|...+.-++.||+.|+-- .-+ |.+...-.- +.+. .++.-+.-.+++|+||.|.|+
T Consensus 155 ~Di~ky~~~~~~l~~me~~L~wr--Hla---------PTaPDTL~~yP~~~~-------Dpfvi~~~PhVyf~Gnq~~f~ 216 (257)
T cd07387 155 DDILKYSSLESRLDILERTLKWR--HIA---------PTAPDTLWCYPFTDR-------DPFILEECPHVYFAGNQPKFG 216 (257)
T ss_pred HHHHHhCCCCCHHHHHHHHHHhc--ccC---------CCCCCccccccCCCC-------CceeecCCCCEEEeCCCccee
Confidence 1233445577788877651 111 111110000 0000 122223457999999999987
Q ss_pred eE
Q 008029 416 RM 417 (580)
Q Consensus 416 R~ 417 (580)
-.
T Consensus 217 t~ 218 (257)
T cd07387 217 TK 218 (257)
T ss_pred ee
Confidence 64
|
PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily |
| >PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.0073 Score=61.01 Aligned_cols=39 Identities=26% Similarity=0.319 Sum_probs=25.0
Q ss_pred eEEEEEcccCCCCCh-HHHHHHHHH---------CCCCEEEEccccccc
Q 008029 200 HRIAVIGDLGLTSNS-STTVDHLIQ---------NDPSLILMVGDLTYA 238 (580)
Q Consensus 200 ~rfav~gD~g~~~~~-~~~l~~i~~---------~~pDfvl~~GDl~Y~ 238 (580)
+|++++||+|..... .++++++.- ..-|.++++||+++.
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDR 49 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDR 49 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCC
Confidence 478999999976432 223333211 123789999999964
|
|
| >COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.099 Score=56.82 Aligned_cols=90 Identities=18% Similarity=0.356 Sum_probs=56.8
Q ss_pred CCeEEEEEcccCCCCCh------HHHHHHHH-----HCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccH
Q 008029 198 YPHRIAVIGDLGLTSNS------STTVDHLI-----QNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQ 266 (580)
Q Consensus 198 ~~~rfav~gD~g~~~~~------~~~l~~i~-----~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~ 266 (580)
..+++++++|.|.+... ...++.+. ..+...++.+||+++.-+- |.....+..+.+-|
T Consensus 224 e~v~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigi----------Ypgq~~eL~i~di~- 292 (481)
T COG1311 224 ERVYVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGI----------YPGQEEELVIADIY- 292 (481)
T ss_pred cceEEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEeccccccccc----------ccCcccccccccch-
Confidence 46889999999987432 22333332 1245789999999963221 11111122223333
Q ss_pred HHHHHHHHhhhhhccCCCeEEecCCCCCCCCc
Q 008029 267 PRWDGWGRFMEPLTSRVPMMVIEGNHEIEPQV 298 (580)
Q Consensus 267 ~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~ 298 (580)
.+++.+.+++..+-..+-+++.|||||.....
T Consensus 293 ~qy~~~A~~L~~vp~~I~v~i~PGnhDa~r~a 324 (481)
T COG1311 293 EQYEELAEFLDQVPEHIKVFIMPGNHDAVRQA 324 (481)
T ss_pred HHHHHHHHHHhhCCCCceEEEecCCCCccccc
Confidence 35667778888777889999999999986543
|
|
| >PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes [] | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.034 Score=45.21 Aligned_cols=76 Identities=25% Similarity=0.371 Sum_probs=47.7
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|+.+++.-...+++.|+|...... +.. ...=.|+|....+..... .... ++-.+
T Consensus 2 ~P~~l~v~~~~~~sv~v~W~~~~~~-~~~-------~~~y~v~~~~~~~~~~~~----~~~~-------------~~~~~ 56 (85)
T PF00041_consen 2 APENLSVSNISPTSVTVSWKPPSSG-NGP-------ITGYRVEYRSVNSTSDWQ----EVTV-------------PGNET 56 (85)
T ss_dssp SSEEEEEEEECSSEEEEEEEESSST-SSS-------ESEEEEEEEETTSSSEEE----EEEE-------------ETTSS
T ss_pred cCcCeEEEECCCCEEEEEEECCCCC-CCC-------eeEEEEEEEecccceeee----eeee-------------eeeee
Confidence 5888888877899999999986411 111 123456665554432110 0000 11224
Q ss_pred EEEeCCCCCCCEEEEEEEeCC
Q 008029 157 HVKIDGLDPGTKYYYKCGDSK 177 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~ 177 (580)
.++|+||+|+|+|.++|...+
T Consensus 57 ~~~i~~L~p~t~Y~~~v~a~~ 77 (85)
T PF00041_consen 57 SYTITGLQPGTTYEFRVRAVN 77 (85)
T ss_dssp EEEEESCCTTSEEEEEEEEEE
T ss_pred eeeeccCCCCCEEEEEEEEEe
Confidence 778899999999999998654
|
They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A .... |
| >cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.099 Score=52.41 Aligned_cols=135 Identities=14% Similarity=0.166 Sum_probs=69.9
Q ss_pred HHhhhhhccCCCeEEecCCCCCCCCcccccHHHHH---hhcCCCCCCCCCC---CcceEEEEeCc--EEEEEEcCcccCC
Q 008029 273 GRFMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYL---TRFAVPSEESGSN---SNFYYSFNAGG--VHFIMLGAYVDYN 344 (580)
Q Consensus 273 ~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~---~~f~~P~~~~~~~---~~~yYsfd~G~--v~fI~Ldt~~~~~ 344 (580)
.+.|+.+ .+-++.+.+||++.... ..+.... ..-.++....+.. ...+..++.++ +.|+.+.+.....
T Consensus 70 ~~~L~~~--G~d~~tlaNNH~fD~G~--~gl~~t~~~l~~~~i~~~g~~~~~~~~~~~~i~~~~g~kVg~ig~t~~~~~~ 145 (239)
T cd07381 70 ADALKAA--GFDVVSLANNHTLDYGE--EGLLDTLDALDEAGIAHAGAGRNLEEARRPAILEVNGIKVAFLAYTYGTNGI 145 (239)
T ss_pred HHHHHHh--CCCEEEcccccccccch--HHHHHHHHHHHHcCCceeECCCCHHHhcCcEEEEECCEEEEEEEEECCCCCC
Confidence 3444433 55566666699986432 2222222 2223443222211 13456667777 4555554322110
Q ss_pred ----------CcHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEEccccCc
Q 008029 345 ----------STGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAY 414 (580)
Q Consensus 345 ----------~~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~y 414 (580)
......+-+++.+++++.+ ...+|++.|-..-.... .......+...+.+.++|+|+.||.|..
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~i~~lr~~-~D~vIv~~H~G~e~~~~-----p~~~~~~la~~l~~~G~D~IiG~H~Hv~ 219 (239)
T cd07381 146 PLAAGARPGGVNPLDLERIAADIAEAKKK-ADIVIVSLHWGVEYSYY-----PTPEQRELARALIDAGADLVIGHHPHVL 219 (239)
T ss_pred cCcccCCccccCccCHHHHHHHHHHHhhc-CCEEEEEecCcccCCCC-----CCHHHHHHHHHHHHCCCCEEEcCCCCcC
Confidence 0111134456666665433 78999999965422111 1112335555556679999999999986
Q ss_pred eeE
Q 008029 415 ERM 417 (580)
Q Consensus 415 eR~ 417 (580)
+-.
T Consensus 220 q~~ 222 (239)
T cd07381 220 QGI 222 (239)
T ss_pred CCe
Confidence 543
|
CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal |
| >cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.011 Score=58.82 Aligned_cols=36 Identities=19% Similarity=0.275 Sum_probs=23.8
Q ss_pred EEEcccCCCCCh-HHHHHHHHHC--------CCCEEEEccccccc
Q 008029 203 AVIGDLGLTSNS-STTVDHLIQN--------DPSLILMVGDLTYA 238 (580)
Q Consensus 203 av~gD~g~~~~~-~~~l~~i~~~--------~pDfvl~~GDl~Y~ 238 (580)
.++||.|..... .+.++++... ..|.++++||+++.
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDR 46 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDR 46 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCC
Confidence 589999986433 2334443211 35899999999964
|
PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of |
| >PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.2 Score=50.43 Aligned_cols=189 Identities=16% Similarity=0.219 Sum_probs=90.9
Q ss_pred EEEcccCCCCChH---HHHHHHHH-CCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHHHhhhh
Q 008029 203 AVIGDLGLTSNSS---TTVDHLIQ-NDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRFMEP 278 (580)
Q Consensus 203 av~gD~g~~~~~~---~~l~~i~~-~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~~~l~~ 278 (580)
+++||.=....-. ..+..+.+ .++||||..|.++-. |.|.. ....+ +++
T Consensus 1 LfiGDIvG~~Gr~~v~~~Lp~L~~~~~~DfVIaNgENaa~-------G~Git---------------~~~~~---~L~-- 53 (253)
T PF13277_consen 1 LFIGDIVGKPGRRAVKEHLPELKEEYGIDFVIANGENAAG-------GFGIT---------------PKIAE---ELF-- 53 (253)
T ss_dssp EEE-EBBCHHHHHHHHHHHHHHGG--G-SEEEEE-TTTTT-------TSS-----------------HHHHH---HHH--
T ss_pred CeEEecCCHHHHHHHHHHHHHHHhhcCCCEEEECCcccCC-------CCCCC---------------HHHHH---HHH--
Confidence 3567764332222 22333433 489999999999843 22210 11112 222
Q ss_pred hccCCCeEEecCCCCCCCCcccccHHHHHhh---cCCCCCCC-CCCCcceEEEEeCcEEEEEEcC--cccCCCcHHHHHH
Q 008029 279 LTSRVPMMVIEGNHEIEPQVAGITFKSYLTR---FAVPSEES-GSNSNFYYSFNAGGVHFIMLGA--YVDYNSTGAQYAW 352 (580)
Q Consensus 279 l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~---f~~P~~~~-~~~~~~yYsfd~G~v~fI~Ldt--~~~~~~~~~Q~~W 352 (580)
...+-+ .+.|||=+.. +....|... .--|.|-+ +..+.-|..++.++.++-+++- +........-+.-
T Consensus 54 -~~GvDv-iT~GNH~wdk----kei~~~i~~~~~ilRPaN~p~~~pG~G~~i~~~~g~kv~ViNl~Gr~fm~~~~~PF~~ 127 (253)
T PF13277_consen 54 -KAGVDV-ITMGNHIWDK----KEIFDFIDKEPRILRPANYPPGTPGRGYRIFEKNGKKVAVINLMGRVFMPPIDCPFRA 127 (253)
T ss_dssp -HHT-SE-EE--TTTTSS----TTHHHHHHH-SSEE--TTS-TT-SSBSEEEEEETTEEEEEEEEE--TTS---S-HHHH
T ss_pred -hcCCCE-EecCcccccC----cHHHHHHhcCCCcEECCCCCCCCCcCcEEEEEECCEEEEEEECcccccCCCCCChHHH
Confidence 123443 5689998853 233334332 33455433 2456788899999877666653 3333333344555
Q ss_pred HHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEEccccCceeEeeccccccCCCCcEE
Q 008029 353 LKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDACGPVY 432 (580)
Q Consensus 353 Le~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vy 432 (580)
+++.|++. +.+++.+||=+|.=. ... +.-.-.+.+-+|.+|+--|+|.-. .+..+-|+|+.|
T Consensus 128 ~d~~l~~l-~~~~~~iiVDFHAEa-----------TSE-K~A~g~~lDGrvsaV~GTHTHVqT-----aDerILp~GTaY 189 (253)
T PF13277_consen 128 ADRLLEEL-KEETDIIIVDFHAEA-----------TSE-KQAMGWYLDGRVSAVVGTHTHVQT-----ADERILPGGTAY 189 (253)
T ss_dssp HHHHHHH------SEEEEEEE-S------------HHH-HHHHHHHHBTTBSEEEEESSSS-B-----S--EE-TTS-EE
T ss_pred HHHHHHhc-cccCCEEEEEeecCc-----------HHH-HHHHHHHhCCcEEEEEeCCCCccC-----chhhccCCCCEE
Confidence 66666664 356788999999631 111 222345667799999999999632 222224789999
Q ss_pred EEe-CCCCccc
Q 008029 433 ITV-GDGGNIE 442 (580)
Q Consensus 433 Iv~-G~gG~~e 442 (580)
|+- |.-|...
T Consensus 190 iTDvGMtG~~d 200 (253)
T PF13277_consen 190 ITDVGMTGPYD 200 (253)
T ss_dssp ES---EBEESS
T ss_pred EecCccccCcc
Confidence 953 6666653
|
|
| >cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.017 Score=58.81 Aligned_cols=36 Identities=19% Similarity=0.278 Sum_probs=24.9
Q ss_pred EEEcccCCCCCh-HHHHHHHHH-CCCCEEEEccccccc
Q 008029 203 AVIGDLGLTSNS-STTVDHLIQ-NDPSLILMVGDLTYA 238 (580)
Q Consensus 203 av~gD~g~~~~~-~~~l~~i~~-~~pDfvl~~GDl~Y~ 238 (580)
.++||+|..... .++++++.. .+.|.++++||+++.
T Consensus 2 yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdR 39 (257)
T cd07422 2 YAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNR 39 (257)
T ss_pred EEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCC
Confidence 589999986433 334444432 257999999999964
|
ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa |
| >cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.016 Score=57.20 Aligned_cols=35 Identities=17% Similarity=0.247 Sum_probs=23.9
Q ss_pred EEcccCCCCCh-HHHHHHHHHCCCCEEEEccccccc
Q 008029 204 VIGDLGLTSNS-STTVDHLIQNDPSLILMVGDLTYA 238 (580)
Q Consensus 204 v~gD~g~~~~~-~~~l~~i~~~~pDfvl~~GDl~Y~ 238 (580)
++||+|..... .++++.+.....|.++++||+++.
T Consensus 2 ~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdr 37 (225)
T cd00144 2 VIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDR 37 (225)
T ss_pred EEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCC
Confidence 78999975332 233333333578999999999964
|
The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate |
| >cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.027 Score=58.03 Aligned_cols=38 Identities=16% Similarity=0.244 Sum_probs=26.2
Q ss_pred EEEEEcccCCCCCh-HHHHHHHHHC------CCCEEEEccccccc
Q 008029 201 RIAVIGDLGLTSNS-STTVDHLIQN------DPSLILMVGDLTYA 238 (580)
Q Consensus 201 rfav~gD~g~~~~~-~~~l~~i~~~------~pDfvl~~GDl~Y~ 238 (580)
++.++||.|..... ..+++.+.+. ..+.+|++||+++.
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDR 47 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDR 47 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCC
Confidence 68999999987543 3344444322 35689999999964
|
Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol |
| >COG1692 Calcineurin-like phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.24 E-value=0.51 Score=47.10 Aligned_cols=193 Identities=17% Similarity=0.197 Sum_probs=104.1
Q ss_pred eEEEEEcccCCCCChHHHHH---HHH-HCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHHHh
Q 008029 200 HRIAVIGDLGLTSNSSTTVD---HLI-QNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRF 275 (580)
Q Consensus 200 ~rfav~gD~g~~~~~~~~l~---~i~-~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~~~ 275 (580)
+|++++||+=....-..+-+ .+. +.++||+|..|-++-. |.|. -|+-+.++
T Consensus 1 mriLfiGDvvGk~Gr~~v~~~Lp~lk~kyk~dfvI~N~ENaa~-------G~Gi------------------t~k~y~~l 55 (266)
T COG1692 1 MRILFIGDVVGKPGRKAVKEHLPQLKSKYKIDFVIVNGENAAG-------GFGI------------------TEKIYKEL 55 (266)
T ss_pred CeEEEEecccCcchHHHHHHHhHHHHHhhcCcEEEEcCccccC-------CcCC------------------CHHHHHHH
Confidence 58999999866544333333 333 3489999999998832 2221 12333333
Q ss_pred hhhhccCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCCCC-CCCcceEEEEeCcEEEEE--EcCcccCC-CcHHHHH
Q 008029 276 MEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESG-SNSNFYYSFNAGGVHFIM--LGAYVDYN-STGAQYA 351 (580)
Q Consensus 276 l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~-~~~~~yYsfd~G~v~fI~--Ldt~~~~~-~~~~Q~~ 351 (580)
++ +.+- +++.|||=+.... -..|..-..++--|.|-+. ..+.-|+-|...+..+.+ |-...... .-..-.+
T Consensus 56 ~~---~G~d-viT~GNH~wd~~e-i~~~i~~~~~ilRP~N~p~~~~G~G~~~f~~ng~ki~V~Nl~Grv~m~~~~d~PF~ 130 (266)
T COG1692 56 LE---AGAD-VITLGNHTWDQKE-ILDFIDNADRILRPANYPDGTPGKGSRIFKINGKKLAVINLMGRVFMPPALDNPFK 130 (266)
T ss_pred HH---hCCC-EEecccccccchH-HHHHhhcccceeccCCCCCCCCcceEEEEEeCCcEEEEEEeeccccCccccCCHHH
Confidence 32 2333 4678999875221 1111111223334444322 234456666666544444 33333222 1333455
Q ss_pred HHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEEccccCceeEeeccccccCCCCcE
Q 008029 352 WLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDACGPV 431 (580)
Q Consensus 352 WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR~~pv~n~~~~~~G~v 431 (580)
=+++.|.+.+ .+++.+||-+|.-.-+ +. .+| -++.+-+|.+|+-=|+|.-.--. .+-++|+.
T Consensus 131 ~~d~l~~~~~-~~~~~iiVDFHAEtTS-------EK----~a~-g~yldGrvsavvGTHTHV~TaD~-----rIL~~GTa 192 (266)
T COG1692 131 AADKLLDEIK-LGTDLIIVDFHAETTS-------EK----NAF-GWYLDGRVSAVVGTHTHVPTADE-----RILPKGTA 192 (266)
T ss_pred HHHHHHHhCc-cCCceEEEEccccchh-------hh----hhh-heEEcCeEEEEEeccCccccccc-----eecCCCcE
Confidence 5667777654 4567899999974221 11 111 23345578999999999643322 22478999
Q ss_pred EEEe-CCCCc
Q 008029 432 YITV-GDGGN 440 (580)
Q Consensus 432 yIv~-G~gG~ 440 (580)
||+- |.-|.
T Consensus 193 yiTDvGMtG~ 202 (266)
T COG1692 193 YITDVGMTGP 202 (266)
T ss_pred EEecCccccc
Confidence 9863 54444
|
|
| >smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap | Back alignment and domain information |
|---|
Probab=95.17 E-value=0.49 Score=47.47 Aligned_cols=135 Identities=12% Similarity=0.175 Sum_probs=68.0
Q ss_pred HHhhhhhccCCCeEEecCCCCCCCCcccccHHHHHh---hcCCCCCCCCCC---CcceEEEEeCcEE--EEEEcCccc--
Q 008029 273 GRFMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLT---RFAVPSEESGSN---SNFYYSFNAGGVH--FIMLGAYVD-- 342 (580)
Q Consensus 273 ~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~---~f~~P~~~~~~~---~~~yYsfd~G~v~--fI~Ldt~~~-- 342 (580)
.+.|+.+ .+-++.+-+|||+.... +.+..... ...++....+.. ...|..++.++++ |+.+-+...
T Consensus 66 ~~~l~~~--G~d~~~laNNH~fD~G~--~gl~~t~~~l~~a~i~~~g~~~~~~~~~~~~i~~~~g~kIg~ig~t~~~~~~ 141 (239)
T smart00854 66 AAALKAA--GFDVVSLANNHSLDYGE--EGLLDTLAALDAAGIAHVGAGRNLAEARKPAIVEVKGIKIALLAYTYGTNNG 141 (239)
T ss_pred HHHHHHh--CCCEEEeccCcccccch--HHHHHHHHHHHHCCCCEeeCCCChHHhhCcEEEEECCEEEEEEEEEcCCCCC
Confidence 3444443 45555555599996442 22222222 223443222111 1345667788755 444432211
Q ss_pred CC-----C-----cHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEEcccc
Q 008029 343 YN-----S-----TGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVH 412 (580)
Q Consensus 343 ~~-----~-----~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H 412 (580)
+. . .....+=+++.+++++. +...+|++.|--.-..... ... ...+..-+.+.++|+|+.||.|
T Consensus 142 ~~~~~~~~g~~~~~~~~~~~i~~~i~~lr~-~~D~vIv~~H~G~e~~~~p----~~~-~~~~A~~l~~~G~DvIiG~H~H 215 (239)
T smart00854 142 WAASKDRPGVALLPDLDREKILADIARARK-KADVVIVSLHWGVEYQYEP----TDE-QRELAHALIDAGADVVIGHHPH 215 (239)
T ss_pred cccCCCCCCeeecCcCCHHHHHHHHHHHhc-cCCEEEEEecCccccCCCC----CHH-HHHHHHHHHHcCCCEEEcCCCC
Confidence 10 0 00112334555555543 4789999999764322111 111 2344444555799999999999
Q ss_pred CceeE
Q 008029 413 AYERM 417 (580)
Q Consensus 413 ~yeR~ 417 (580)
..+..
T Consensus 216 ~~~~~ 220 (239)
T smart00854 216 VLQPI 220 (239)
T ss_pred cCCce
Confidence 87644
|
This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein. |
| >TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.026 Score=57.85 Aligned_cols=38 Identities=18% Similarity=0.283 Sum_probs=27.1
Q ss_pred EEEEEcccCCCCCh-HHHHHHHH-HCCCCEEEEccccccc
Q 008029 201 RIAVIGDLGLTSNS-STTVDHLI-QNDPSLILMVGDLTYA 238 (580)
Q Consensus 201 rfav~gD~g~~~~~-~~~l~~i~-~~~pDfvl~~GDl~Y~ 238 (580)
++.++||+|..... .+.++++. +...|-++++||+++.
T Consensus 2 ~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdR 41 (279)
T TIGR00668 2 ATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVAR 41 (279)
T ss_pred cEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCC
Confidence 46799999986543 34555553 2356899999999964
|
Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. |
| >COG1407 Predicted ICC-like phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.93 E-value=0.061 Score=53.63 Aligned_cols=73 Identities=25% Similarity=0.426 Sum_probs=46.2
Q ss_pred eEEEEEcccCCCCCh--------------H---HHHHH-HHHCCCCEEEEcccccccccccccCCCCCcccccCCCCCcc
Q 008029 200 HRIAVIGDLGLTSNS--------------S---TTVDH-LIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPI 261 (580)
Q Consensus 200 ~rfav~gD~g~~~~~--------------~---~~l~~-i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~ 261 (580)
-+.++++|+|.+... . ..+++ +.+.+|+-++.+||+-.+-..
T Consensus 20 ~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~-------------------- 79 (235)
T COG1407 20 GRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGK-------------------- 79 (235)
T ss_pred CcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCc--------------------
Confidence 367999999998542 1 12332 235699999999999864210
Q ss_pred ccccHHHHHHHHHhhhhhccCCCeEEecCCCCCC
Q 008029 262 RETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIE 295 (580)
Q Consensus 262 ~e~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~ 295 (580)
.....|+....+++.+... -++++.||||-.
T Consensus 80 --~~~~e~~~~~~f~~~~~~~-evi~i~GNHD~~ 110 (235)
T COG1407 80 --SLRQEKEEVREFLELLDER-EVIIIRGNHDNG 110 (235)
T ss_pred --cccccHHHHHHHHHHhccC-cEEEEeccCCCc
Confidence 0112345544555544333 599999999974
|
|
| >KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=94.18 E-value=0.099 Score=57.21 Aligned_cols=41 Identities=37% Similarity=0.396 Sum_probs=32.3
Q ss_pred CeEEEEEcccCCCCC---------hHHHHHHH----HHCCCCEEEEcccccccc
Q 008029 199 PHRIAVIGDLGLTSN---------SSTTVDHL----IQNDPSLILMVGDLTYAN 239 (580)
Q Consensus 199 ~~rfav~gD~g~~~~---------~~~~l~~i----~~~~pDfvl~~GDl~Y~d 239 (580)
.+||++..|.|.++. +..+++.| .+++.||||..||++..+
T Consensus 13 tirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeN 66 (646)
T KOG2310|consen 13 TIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHEN 66 (646)
T ss_pred ceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccC
Confidence 699999999999864 23444444 357999999999999875
|
|
| >PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria | Back alignment and domain information |
|---|
Probab=93.29 E-value=1.1 Score=45.33 Aligned_cols=128 Identities=16% Similarity=0.176 Sum_probs=72.6
Q ss_pred CCCeEEecCCCCCCCCcccccHH---HHHhhcCCCCCCCCC---CCcceEEEEeCcEEEEEEcCcccC---C--------
Q 008029 282 RVPMMVIEGNHEIEPQVAGITFK---SYLTRFAVPSEESGS---NSNFYYSFNAGGVHFIMLGAYVDY---N-------- 344 (580)
Q Consensus 282 ~vP~~~v~GNHD~~~~~~~~~f~---~y~~~f~~P~~~~~~---~~~~yYsfd~G~v~fI~Ldt~~~~---~-------- 344 (580)
.+-++.+.-||.+..... .+. .......++..+.+. .......++.+++++-++...... .
T Consensus 75 G~d~vslANNH~~D~G~~--gl~~Tl~~L~~~gi~~~Gag~~~~~a~~p~i~~~~g~kia~l~~t~~~~~~~~~~~~~~~ 152 (250)
T PF09587_consen 75 GFDVVSLANNHIFDYGEE--GLLDTLEALDKAGIPYVGAGRNLEEARRPAIIEVNGVKIAFLGYTDGENGYSSANGNRPY 152 (250)
T ss_pred CCCEEEecCCCCccccHH--HHHHHHHHHHHCCCcEeECcCChHHhcCeEEEEECCEEEEEEEEEcCCCCCccccccccc
Confidence 566777888998754322 221 222233333322211 123345667777666555421110 0
Q ss_pred ------------CcHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEEcccc
Q 008029 345 ------------STGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVH 412 (580)
Q Consensus 345 ------------~~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H 412 (580)
....+.+.+++++++++ ++..++||+.|--.-.... .. ....++...|.+.++|+|+.+|.|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~i~~~i~~~r-~~~D~vIv~~HwG~e~~~~----p~-~~q~~~a~~lidaGaDiIiG~HpH 226 (250)
T PF09587_consen 153 GFSYRPDKAGLNPNRPGIERIKEDIREAR-KKADVVIVSLHWGIEYENY----PT-PEQRELARALIDAGADIIIGHHPH 226 (250)
T ss_pred cccccccccccccccchHHHHHHHHHHHh-cCCCEEEEEeccCCCCCCC----CC-HHHHHHHHHHHHcCCCEEEeCCCC
Confidence 01234588888888876 5688999999974221111 11 223455556666899999999999
Q ss_pred CceeE
Q 008029 413 AYERM 417 (580)
Q Consensus 413 ~yeR~ 417 (580)
..+-.
T Consensus 227 v~q~~ 231 (250)
T PF09587_consen 227 VIQPV 231 (250)
T ss_pred cccce
Confidence 86654
|
Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein []. |
| >cd07416 MPP_PP2B PP2B, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=91.94 E-value=0.21 Score=52.19 Aligned_cols=22 Identities=9% Similarity=0.105 Sum_probs=19.3
Q ss_pred HHHHHHHHHhcCCcEEEEcccc
Q 008029 391 RQEMEALLYQYGVDIVFSGHVH 412 (580)
Q Consensus 391 r~~l~~Ll~ky~VdlvlsGH~H 412 (580)
.+++.+.|++.+.++++=||.=
T Consensus 222 ~~~~~~Fl~~n~l~~iiR~He~ 243 (305)
T cd07416 222 YRAVCEFLQKNNLLSIIRAHEA 243 (305)
T ss_pred HHHHHHHHHHcCCeEEEEeccc
Confidence 4678899999999999999984
|
PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G |
| >cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=91.41 E-value=0.29 Score=51.39 Aligned_cols=23 Identities=13% Similarity=0.260 Sum_probs=19.9
Q ss_pred HHHHHHHHHhcCCcEEEEccccC
Q 008029 391 RQEMEALLYQYGVDIVFSGHVHA 413 (580)
Q Consensus 391 r~~l~~Ll~ky~VdlvlsGH~H~ 413 (580)
.+++...|++.+.++++=||.-.
T Consensus 253 ~~~~~~Fl~~n~l~~IIR~He~v 275 (321)
T cd07420 253 PDVTSKVLQKHGLSLLIRSHECK 275 (321)
T ss_pred HHHHHHHHHHCCCcEEEEcChhh
Confidence 56788999999999999999843
|
RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all |
| >smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain | Back alignment and domain information |
|---|
Probab=91.01 E-value=0.31 Score=50.06 Aligned_cols=21 Identities=10% Similarity=0.362 Sum_probs=19.1
Q ss_pred HHHHHHHHHhcCCcEEEEccc
Q 008029 391 RQEMEALLYQYGVDIVFSGHV 411 (580)
Q Consensus 391 r~~l~~Ll~ky~VdlvlsGH~ 411 (580)
.+++.+.|+++++++++-||.
T Consensus 200 ~~~~~~Fl~~n~l~~iiR~He 220 (271)
T smart00156 200 PDAVDEFLKKNNLKLIIRAHQ 220 (271)
T ss_pred HHHHHHHHHHCCCeEEEecCc
Confidence 468889999999999999997
|
Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members. |
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=90.98 E-value=1.3 Score=51.14 Aligned_cols=37 Identities=35% Similarity=0.613 Sum_probs=31.1
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCC---CCccceEEEEcCCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKI---PAMSAEHVFETLPL 192 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~ 192 (580)
..|+|+||+|+|.|-+||..... +..|....|.|.+.
T Consensus 498 ~~~ti~gL~p~t~YvfqVRarT~aG~G~~S~~~~fqT~~~ 537 (996)
T KOG0196|consen 498 TTATITGLKPGTVYVFQVRARTAAGYGPYSGKHEFQTLPS 537 (996)
T ss_pred ceEEeeccCCCcEEEEEEEEecccCCCCCCCceeeeecCc
Confidence 57899999999999999966432 36799999999986
|
|
| >KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.79 E-value=1.3 Score=49.58 Aligned_cols=58 Identities=21% Similarity=0.249 Sum_probs=37.5
Q ss_pred cHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhc-CCcE-EEEccccCc
Q 008029 346 TGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQY-GVDI-VFSGHVHAY 414 (580)
Q Consensus 346 ~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky-~Vdl-vlsGH~H~y 414 (580)
.-.|.+|-.+.++. .+..-+|++.|.|.-... +. ...+..+...+ ++++ ||-||.|..
T Consensus 210 ei~~~~~~~~m~~~---~~idlii~lgH~~~~~~~-----e~---~~~~~~ir~~~p~t~IqviGGHshir 269 (602)
T KOG4419|consen 210 EITQSEWEQDMVNT---TDIDLIIALGHSPVRDDD-----EW---KSLHAEIRKVHPNTPIQVIGGHSHIR 269 (602)
T ss_pred HHhccchHHHHhhc---cCccEEEEecccccccch-----hh---hhHHHHHhhhCCCCceEEECchhhhh
Confidence 35567777777766 456679999999854321 11 11344444444 6788 999999974
|
|
| >cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=90.10 E-value=0.35 Score=50.02 Aligned_cols=23 Identities=13% Similarity=0.267 Sum_probs=20.1
Q ss_pred HHHHHHHHHhcCCcEEEEccccC
Q 008029 391 RQEMEALLYQYGVDIVFSGHVHA 413 (580)
Q Consensus 391 r~~l~~Ll~ky~VdlvlsGH~H~ 413 (580)
.+++.+.|++.+.++++=||.-.
T Consensus 214 ~~~~~~Fl~~n~l~~iiR~He~~ 236 (285)
T cd07415 214 QDVVEEFNHNNGLTLICRAHQLV 236 (285)
T ss_pred HHHHHHHHHHCCCeEEEEcCccc
Confidence 56888999999999999999853
|
PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2 |
| >cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=89.60 E-value=0.39 Score=49.88 Aligned_cols=23 Identities=13% Similarity=0.312 Sum_probs=20.0
Q ss_pred HHHHHHHHHhcCCcEEEEccccC
Q 008029 391 RQEMEALLYQYGVDIVFSGHVHA 413 (580)
Q Consensus 391 r~~l~~Ll~ky~VdlvlsGH~H~ 413 (580)
.+++...|++.+.++++=||.-.
T Consensus 222 ~~~~~~Fl~~n~l~~iiR~He~~ 244 (293)
T cd07414 222 KDVVAKFLNKHDLDLICRAHQVV 244 (293)
T ss_pred HHHHHHHHHHcCCeEEEECCccc
Confidence 46888999999999999999854
|
PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg |
| >PTZ00239 serine/threonine protein phosphatase 2A; Provisional | Back alignment and domain information |
|---|
Probab=89.24 E-value=0.52 Score=49.21 Aligned_cols=23 Identities=4% Similarity=0.079 Sum_probs=20.1
Q ss_pred HHHHHHHHHhcCCcEEEEccccC
Q 008029 391 RQEMEALLYQYGVDIVFSGHVHA 413 (580)
Q Consensus 391 r~~l~~Ll~ky~VdlvlsGH~H~ 413 (580)
.+++++.+++.+.++++=||.-.
T Consensus 215 ~~~~~~Fl~~n~l~~iiR~He~~ 237 (303)
T PTZ00239 215 AKVTKEFCRLNDLTLICRAHQLV 237 (303)
T ss_pred HHHHHHHHHHCCCcEEEEcChhh
Confidence 46888999999999999999853
|
|
| >KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=89.04 E-value=1.4 Score=52.77 Aligned_cols=91 Identities=25% Similarity=0.302 Sum_probs=55.7
Q ss_pred CCCCCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcE----EEEcccCCCcc---eEEeeEEEEEeeecccC
Q 008029 73 VTSNFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASD----VWYGKQSGKYT---SKRGGNATVYSQLYPFK 145 (580)
Q Consensus 73 ~~~~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~----V~yg~~~~~~~---~~a~g~~~~y~~~~p~~ 145 (580)
.++..|+.|.|....+++++|+|.+..... ..... ++|++.+.... ..+.|.
T Consensus 614 ~PsaPP~Nl~lev~sStsVrVsW~pP~~~t----------~ng~itgYkIRy~~~~~~~~~~~t~v~~n----------- 672 (1381)
T KOG4221|consen 614 VPSAPPQNLSLEVVSSTSVRVSWLPPPSET----------QNGQITGYKIRYRKLSREDEVNETVVKGN----------- 672 (1381)
T ss_pred CCCCCCcceEEEecCCCeEEEEccCCCccc----------ccceEEEEEEEecccCcccccceeecccc-----------
Confidence 566678889999888999999999754321 01122 34443322211 111111
Q ss_pred CccccccccEEEEEeCCCCCCCEEEEEEEeCCC---CCccceEEEEcCCCC
Q 008029 146 GLLNYTSGIIHHVKIDGLDPGTKYYYKCGDSKI---PAMSAEHVFETLPLP 193 (580)
Q Consensus 146 g~~~~~~~~~h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~ 193 (580)
.+.| .+++|+|+|.|.+||..... +..|++.++.|+-..
T Consensus 673 -------~~~~--l~~~Lep~T~Y~vrIsa~t~nGtGpaS~w~~aeT~~~d 714 (1381)
T KOG4221|consen 673 -------TTQY--LFNGLEPNTQYRVRISAMTVNGTGPASEWVSAETPESD 714 (1381)
T ss_pred -------hhhh--HhhcCCCCceEEEEEEEeccCCCCCcccceeccCcccc
Confidence 1112 35789999999999966442 356889999996433
|
|
| >PTZ00480 serine/threonine-protein phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=88.19 E-value=0.58 Score=49.15 Aligned_cols=23 Identities=13% Similarity=0.303 Sum_probs=20.2
Q ss_pred HHHHHHHHHhcCCcEEEEccccC
Q 008029 391 RQEMEALLYQYGVDIVFSGHVHA 413 (580)
Q Consensus 391 r~~l~~Ll~ky~VdlvlsGH~H~ 413 (580)
.+++.+.|++++.++++=||.-.
T Consensus 231 ~~~~~~Fl~~n~l~~IiR~Hq~v 253 (320)
T PTZ00480 231 QEIVQVFLKKHELDLICRAHQVV 253 (320)
T ss_pred HHHHHHHHHhCCCcEEEEcCccc
Confidence 56888999999999999999854
|
|
| >cd07418 MPP_PP7 PP7, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=88.17 E-value=0.74 Score=49.39 Aligned_cols=21 Identities=14% Similarity=0.276 Sum_probs=19.3
Q ss_pred HHHHHHHHHhcCCcEEEEccc
Q 008029 391 RQEMEALLYQYGVDIVFSGHV 411 (580)
Q Consensus 391 r~~l~~Ll~ky~VdlvlsGH~ 411 (580)
.+.+...|++++.++++=||.
T Consensus 273 ~~~~~~FL~~n~l~~IIRsHe 293 (377)
T cd07418 273 PDCTEEFLEKNNLKLIIRSHE 293 (377)
T ss_pred HHHHHHHHHHcCCcEEEECCC
Confidence 568889999999999999998
|
PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, |
| >cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin | Back alignment and domain information |
|---|
Probab=88.04 E-value=4.4 Score=31.96 Aligned_cols=23 Identities=26% Similarity=0.566 Sum_probs=19.1
Q ss_pred EEEEEeCCCCCCCEEEEEEEeCC
Q 008029 155 IHHVKIDGLDPGTKYYYKCGDSK 177 (580)
Q Consensus 155 ~h~v~l~gL~P~T~Y~Yrvg~~~ 177 (580)
..++.+.+|.|+++|.++|..-.
T Consensus 56 ~~~~~i~~l~p~~~Y~~~v~a~~ 78 (93)
T cd00063 56 ETSYTLTGLKPGTEYEFRVRAVN 78 (93)
T ss_pred ccEEEEccccCCCEEEEEEEEEC
Confidence 36778899999999999996643
|
Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. |
| >PTZ00244 serine/threonine-protein phosphatase PP1; Provisional | Back alignment and domain information |
|---|
Probab=87.22 E-value=0.7 Score=48.03 Aligned_cols=23 Identities=13% Similarity=0.239 Sum_probs=20.0
Q ss_pred HHHHHHHHHhcCCcEEEEccccC
Q 008029 391 RQEMEALLYQYGVDIVFSGHVHA 413 (580)
Q Consensus 391 r~~l~~Ll~ky~VdlvlsGH~H~ 413 (580)
.+++...+++.+.++++=||.-.
T Consensus 224 ~~~~~~Fl~~n~l~~iiR~Hq~~ 246 (294)
T PTZ00244 224 EDIVNDFLDMVDMDLIVRAHQVM 246 (294)
T ss_pred HHHHHHHHHHcCCcEEEEcCccc
Confidence 46888999999999999999843
|
|
| >KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=86.88 E-value=4.7 Score=37.33 Aligned_cols=41 Identities=27% Similarity=0.552 Sum_probs=31.4
Q ss_pred HHHHHHHHhcCCcEEEEccccCceeEeeccccccCCCCcEEEEeCCCCc
Q 008029 392 QEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDACGPVYITVGDGGN 440 (580)
Q Consensus 392 ~~l~~Ll~ky~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyIv~G~gG~ 440 (580)
+.|.-|-++.+||+.+.||+|.++... -+|-.||..|++-.
T Consensus 97 ~sL~~LaRqldvDILl~G~Th~f~Aye--------~eg~ffvnPGSaTG 137 (183)
T KOG3325|consen 97 ESLALLARQLDVDILLTGHTHKFEAYE--------HEGKFFVNPGSATG 137 (183)
T ss_pred HHHHHHHHhcCCcEEEeCCceeEEEEE--------eCCcEEeCCCcccC
Confidence 456667778899999999999988764 46777887776543
|
|
| >cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=83.70 E-value=1.7 Score=45.60 Aligned_cols=21 Identities=10% Similarity=0.306 Sum_probs=18.6
Q ss_pred HHHHHHHHHhcCCcEEEEccc
Q 008029 391 RQEMEALLYQYGVDIVFSGHV 411 (580)
Q Consensus 391 r~~l~~Ll~ky~VdlvlsGH~ 411 (580)
.+++...+++.+.++++=||.
T Consensus 242 ~~~~~~Fl~~n~l~~iiRgHe 262 (311)
T cd07419 242 PDRVHRFLEENDLQMIIRAHE 262 (311)
T ss_pred HHHHHHHHHHCCCeEEEEech
Confidence 467888999999999999997
|
Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most |
| >cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=82.79 E-value=2.1 Score=45.00 Aligned_cols=23 Identities=9% Similarity=0.174 Sum_probs=19.9
Q ss_pred HHHHHHHHHhcCCcEEEEccccC
Q 008029 391 RQEMEALLYQYGVDIVFSGHVHA 413 (580)
Q Consensus 391 r~~l~~Ll~ky~VdlvlsGH~H~ 413 (580)
.+++.+.|++.+.++++-||.-.
T Consensus 233 ~~~~~~Fl~~n~l~~iiR~He~~ 255 (316)
T cd07417 233 PDVTKRFLEENNLEYIIRSHEVK 255 (316)
T ss_pred HHHHHHHHHHcCCcEEEECCccc
Confidence 46788999999999999999853
|
Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel |
| >PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast | Back alignment and domain information |
|---|
Probab=81.98 E-value=1.1 Score=43.72 Aligned_cols=83 Identities=13% Similarity=0.324 Sum_probs=43.2
Q ss_pred EEEEcccCCCCCh--HHHHHHHH-----HCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHH---HH
Q 008029 202 IAVIGDLGLTSNS--STTVDHLI-----QNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRW---DG 271 (580)
Q Consensus 202 fav~gD~g~~~~~--~~~l~~i~-----~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~w---d~ 271 (580)
|++++|.+...+. .+.++++. +.+|+.+|++|+++.........+. ....+.... ..
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~-------------~~~~~~~~~~~~~~ 67 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGS-------------VPDSYSFEEDFLKE 67 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT----------------HHCCHHHHHHHH
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCcccccccccc-------------ccccccccHHHHHH
Confidence 6788999887432 23344433 4579999999999975322111000 000111111 22
Q ss_pred HHHhhhhhccCCCeEEecCCCCCCCC
Q 008029 272 WGRFMEPLTSRVPMMVIEGNHEIEPQ 297 (580)
Q Consensus 272 ~~~~l~~l~~~vP~~~v~GNHD~~~~ 297 (580)
..+.+..+...++++.+||+||....
T Consensus 68 ~~~~~~~i~~~~~vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 68 LDSFLESILPSTQVVLVPGPNDPTSS 93 (209)
T ss_dssp CHHHHCCCHCCSEEEEE--TTCTT-S
T ss_pred HHHHHhhcccccEEEEeCCCcccccc
Confidence 23445566678999999999998644
|
In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G. |
| >smart00060 FN3 Fibronectin type 3 domain | Back alignment and domain information |
|---|
Probab=80.06 E-value=14 Score=28.01 Aligned_cols=23 Identities=26% Similarity=0.579 Sum_probs=19.4
Q ss_pred EEEEEeCCCCCCCEEEEEEEeCC
Q 008029 155 IHHVKIDGLDPGTKYYYKCGDSK 177 (580)
Q Consensus 155 ~h~v~l~gL~P~T~Y~Yrvg~~~ 177 (580)
-+...|.+|+|++.|.++|..-.
T Consensus 56 ~~~~~i~~L~~~~~Y~v~v~a~~ 78 (83)
T smart00060 56 STSYTLTGLKPGTEYEFRVRAVN 78 (83)
T ss_pred ccEEEEeCcCCCCEEEEEEEEEc
Confidence 36788999999999999997543
|
One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 580 | ||||
| 1kbp_A | 432 | Kidney Bean Purple Acid Phosphatase Length = 432 | 1e-57 | ||
| 4dsy_A | 426 | Crystal Structure Of Red Kidney Bean Purple Acid Ph | 1e-57 | ||
| 2qfp_A | 424 | Crystal Structure Of Red Kidney Bean Purple Acid Ph | 1e-57 | ||
| 1xzw_A | 426 | Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPL | 7e-55 |
| >pdb|1KBP|A Chain A, Kidney Bean Purple Acid Phosphatase Length = 432 | Back alignment and structure |
|
| >pdb|4DSY|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid Phosphatase In Complex With Maybridge Fragment Cc24201 Length = 426 | Back alignment and structure |
|
| >pdb|2QFP|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid Phosphatase In Complex With Fluoride Length = 424 | Back alignment and structure |
|
| >pdb|1XZW|A Chain A, Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPLEX Length = 426 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 580 | |||
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 1e-124 | |
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 1e-123 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 2e-36 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 1e-26 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 4e-12 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 2e-11 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 8e-11 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 6e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 7e-06 | |
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 7e-06 | |
| 2yeq_A | 527 | Apased, PHOD, alkaline phosphatase D; hydrolase, p | 4e-05 |
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* Length = 424 | Back alignment and structure |
|---|
Score = 372 bits (957), Expect = e-124
Identities = 156/501 (31%), Positives = 217/501 (43%), Gaps = 98/501 (19%)
Query: 60 DDLPMNHTRLKKNVTSNFPEQIALAIS--SPTSMWVSWVSGDAQIGSNVTPLDPSTVASD 117
D+P++ + N P+Q+ + +M +SWV+ D +S
Sbjct: 1 RDMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMD------------EPGSSA 48
Query: 118 VWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIHHVKIDGLDPGTKYYYKCGDSK 177
V Y + G + Y NY+SG IHH I L TKYYY+ G
Sbjct: 49 VRYWSEKNGRKRIAKGKMSTYRFF-------NYSSGFIHHTTIRKLKYNTKYYYEVGLR- 100
Query: 178 IPAMSAEHVFETLPLPSPTSYPHRIAVIGDLGLTSNSSTTVDHLIQN--DPSLILMVGDL 235
+ F T P P+ +IGDLG + +S+TT+ H + +L VGDL
Sbjct: 101 --NTTRRFSFITPPQTGLDV-PYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDL 157
Query: 236 TYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIE 295
+YA++Y RWD WGRF E + P + GNHEIE
Sbjct: 158 SYADRYPNH--------------------DNVRWDTWGRFTERSVAYQPWIWTAGNHEIE 197
Query: 296 ---PQVAGITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYVDYNSTGAQYAW 352
FK + R+ VP E S S S F+YS H I+L +Y Y QY W
Sbjct: 198 FAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTW 257
Query: 353 LKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVH 412
LK++L K+ R+ TPWL H P YNSY+ H+ E E MR + EA +Y VD+VF+GHVH
Sbjct: 258 LKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVH 317
Query: 413 AYERMNRVYNYTLDA-----------CGPVYITVGDGGNIEQVDVDHADDPGKCPSAGEN 461
AYER RV N PVYIT+GD GN +D
Sbjct: 318 AYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYGVID---------------- 361
Query: 462 LPEFGGVCHLNFTSGPAKGKFCWSKQPEWSAYRESSFGHGILEVVNSTYALWTWHRNQDN 521
QPE+SA+RE+SFGHG+ ++ N T+A ++W+RNQD
Sbjct: 362 -------------------SNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDG 402
Query: 522 YKEDSRGDHIYIVRQPELCFD 542
++ D ++ + D
Sbjct: 403 VAVEA--DSVWFFNRHWYPVD 421
|
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 Length = 426 | Back alignment and structure |
|---|
Score = 369 bits (947), Expect = e-123
Identities = 151/498 (30%), Positives = 214/498 (42%), Gaps = 97/498 (19%)
Query: 57 RGSDDLPMNHTRLKKNVTSNFPEQIALAISS--PTSMWVSWVSGDAQIGSNVTPLDPSTV 114
D+P + N P+Q+ + + +SW + + G+N
Sbjct: 4 AEDVDMPWDSDVFAVPSGYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANK-------- 55
Query: 115 ASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIHHVKIDGLDPGTKYYYKCG 174
V+Y ++ K + G Y NYTS IHH I L+ TKYYY+ G
Sbjct: 56 ---VFYWSENSKSQKRAMGTVVTYKYY-------NYTSAFIHHCTIKDLEYDTKYYYRLG 105
Query: 175 DSKIPAMSAEHVFETLPLPSPTSYPHRIAVIGDLGLTSNSSTTVDHLIQN--DPSLILMV 232
+ F T P P P P+ +IGD+G T +S+TT+ H QN +L +
Sbjct: 106 FGD---AKRQFWFVTPPKPGP-DVPYVFGLIGDIGQTHDSNTTLTHYEQNSAKGQAVLFM 161
Query: 233 GDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRFMEPLTSRVPMMVIEGNH 292
GDL+Y+N++ RWD WGRF E + P + GNH
Sbjct: 162 GDLSYSNRWPNH--------------------DNNRWDTWGRFSERSVAYQPWIWTAGNH 201
Query: 293 EIE---PQVAGITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYVDYNSTGAQ 349
EI+ F + R+ P E SGS +Y+ H I+L +Y + Q
Sbjct: 202 EIDYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRASAHIIVLSSYSGFVKYSPQ 261
Query: 350 YAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSG 409
Y W +L K++R+ TPWL H P YNSY +HY E E MR E Y VDIVFSG
Sbjct: 262 YKWFTSELEKVNRSETPWLIVLVHAPLYNSYEAHYMEGEAMRAIFEPYFVYYKVDIVFSG 321
Query: 410 HVHAYERMNRVYNYTLDA-----------CGPVYITVGDGGNIEQVDVDHADDPGKCPSA 458
HVH+YER RV N + PVYIT+GDGGN E +
Sbjct: 322 HVHSYERSERVSNVAYNIVNAKCTPVSDESAPVYITIGDGGNSEGLA------------- 368
Query: 459 GENLPEFGGVCHLNFTSGPAKGKFCWSKQPEWSAYRESSFGHGILEVVNSTYALWTWHRN 518
QP +SA+RE+SFGHGI ++ N T+A ++WHRN
Sbjct: 369 ----------------------SEMTQPQPSYSAFREASFGHGIFDIKNRTHAHFSWHRN 406
Query: 519 QDNYKEDSRGDHIYIVRQ 536
QD ++ D ++++ +
Sbjct: 407 QDGASVEA--DSLWLLNR 422
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* Length = 313 | Back alignment and structure |
|---|
Score = 137 bits (345), Expect = 2e-36
Identities = 51/316 (16%), Positives = 89/316 (28%), Gaps = 62/316 (19%)
Query: 197 SYPHRIAVIGDLGLTSNSSTTVDHLIQN-----------DPSLILMVGDLTYANQYLTTG 245
+ R +GD G N+ + N IL +GD Y
Sbjct: 4 TPILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFT------ 57
Query: 246 GKAASCYSCAFPDAPIRETYQPRWDGW--GRFMEPLTSRVPMMVIEGNHEIEPQV-AGIT 302
+ + R+ F +P VP V+ GNH+ V A I
Sbjct: 58 --------------GVHDAKDKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIA 103
Query: 303 FKSYLTRFAVPSE------ESGSNSNFYYSFNAGGVHFIML---------GAYVDYNSTG 347
+ R+ PS + ++ F V +
Sbjct: 104 YSKISKRWNFPSPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALAR 163
Query: 348 AQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVF 407
Q AW+K+ L ++ A H P ++ + + C+ +++ LL + V
Sbjct: 164 TQLAWIKKQLAAAK---EDYVLVAGHYPVWSI--AEHGPTHCLVKQLLPLLTTHKVTAYL 218
Query: 408 SGHVHAYERMNRVYNYTLDACGPVYITVGDGGNIEQVDVDHADDPGKCPSAGENLPEF-G 466
GH H + D G ++ G G ++ P G
Sbjct: 219 CGHDHNLQY-------LQDENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLG 271
Query: 467 GVCHLNFTSGPAKGKF 482
G ++ T +
Sbjct: 272 GFAYVEITPKEMSVTY 287
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} Length = 342 | Back alignment and structure |
|---|
Score = 110 bits (274), Expect = 1e-26
Identities = 36/294 (12%), Positives = 67/294 (22%), Gaps = 75/294 (25%)
Query: 201 RIAVIGDLGLTSNSSTTVDHLI-----QNDPSLILMVGDLTYANQYLTTGGKAASCYSCA 255
R A +GD G + + I+ G
Sbjct: 5 RFASLGDWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFIDG---------------- 48
Query: 256 FPDAPIRETYQPRWDGWGRFM---EPLTSRVPMMVIEGNHEIE----------------- 295
++ P W + E +P + G +
Sbjct: 49 -----VKGLNDPAWKNLYEDVYSEEKGDMYMPFFTVLGTRDWTGNYNAQLLKGQGIYIEK 103
Query: 296 ---PQVAGITFKSYLTRFAVPS---------EESGSNSNFYYSFNAGGVHFIML------ 337
+ + ++ +P+ S S FI +
Sbjct: 104 NGETSIEKDADATNYPKWIMPNYWYHYFTHFTVSSGPSIVKTGHKDLAAAFIFIDTWVLS 163
Query: 338 GAYVDYNSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEAL 397
+ + LK L + ++ P Y+S S + + L
Sbjct: 164 SNFPYKKIHEKAWNDLKSQLSVAKKI-ADFIIVVGDQPIYSSGYSRGSS--YLAYYLLPL 220
Query: 398 LYQYGVDIVFSGHVHAYERMNRVYNYTLDACGPVYITVGDGGNIEQVDVDHADD 451
L VD+ SGH + E ++ +IT G G +
Sbjct: 221 LKDAEVDLYISGHDNNMEV--------IEDNDMAHITCGSGSMSQGKSGMKNSK 266
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A Length = 274 | Back alignment and structure |
|---|
Score = 66.0 bits (161), Expect = 4e-12
Identities = 39/234 (16%), Positives = 68/234 (29%), Gaps = 60/234 (25%)
Query: 201 RIAVIGDLGLTSNSSTT-------------VDHLIQN--DPSLILMVGDLTYANQYLTTG 245
+A I D S V L P +++ GD+
Sbjct: 2 LLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIV--------- 52
Query: 246 GKAASCYSCAFPDAPIRETYQPRWDGWGRFMEPLTS-RVPMMVIEGNHEIEPQVAGITFK 304
+ E YQ + L S P+ +I GNH+ + F
Sbjct: 53 ------------NCGRPEEYQ-------VARQILGSLNYPLYLIPGNHDDKA-----LFL 88
Query: 305 SYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYVDYNSTG----AQYAWLKEDLHKL 360
YL + +N + + + + + S G +WL+ L +
Sbjct: 89 EYLQPL--CPQLGSDANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEAQLFEG 146
Query: 361 DRTVTPWLAAAWHPPWYNSYSSHYQEFECM-RQEMEALLYQY-GVDIVFSGHVH 412
P HPP ++ C + AL+ ++ + +F GH H
Sbjct: 147 GDK--PATIFMHHPPL-PLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNH 197
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} Length = 443 | Back alignment and structure |
|---|
Score = 64.8 bits (157), Expect = 2e-11
Identities = 32/249 (12%), Positives = 69/249 (27%), Gaps = 59/249 (23%)
Query: 218 VDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRFME 277
+ + ++++ GDLT G+ S + + +
Sbjct: 85 LADVESKKTDVLIISGDLTN-------NGEKTS------------------HEELAKKLT 119
Query: 278 PL-TSRVPMMVIEGNHEI------------EPQVAGITFKSYLTRFA----VPSEESGSN 320
+ + + V+ GNH+I + I+ + ++ + S
Sbjct: 120 QVEKNGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEF 179
Query: 321 SNFYYSFNAGGVHFIML--GAYVDYNSTG----------AQYAWLKEDLHKLDRTVTPWL 368
S Y + + V +ML Y G W+KE + +
Sbjct: 180 SLSYLAAPSSKVWLLMLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKKNGAKLI 239
Query: 369 AAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDAC 428
H ++ Q++ L + +D SGH+H + +
Sbjct: 240 PVLHHNLTDHNDVIQKGYTINYNQQVIDALTEGAMDFSLSGHIHT----QNIRSAKSTDG 295
Query: 429 GPVY-ITVG 436
+ I
Sbjct: 296 KEITDIVTN 304
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A Length = 330 | Back alignment and structure |
|---|
Score = 62.6 bits (152), Expect = 8e-11
Identities = 44/251 (17%), Positives = 74/251 (29%), Gaps = 57/251 (22%)
Query: 182 SAEHVFETLPLPSPTSYPHRIAVIGDLGLTSNSSTT-------------VDHLIQN--DP 226
S +V L + + I D L ++ L Q+ P
Sbjct: 8 SKAYVEHRLRAAEHPRPDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRP 67
Query: 227 SLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRFMEPLTSRVPMM 286
I+ GDL D Y+ F L ++
Sbjct: 68 DAIVFTGDLA---------------------DKGEPAAYRKLRGLVEPFAAQL--GAELV 104
Query: 287 VIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYVDYNST 346
+ GNH+ + + +L +E+ S + G+ I+L V +
Sbjct: 105 WVMGNHDDRAE-----LRKFL------LDEAPSMAPLDRVCMIDGLRIIVLDTSVPGHHH 153
Query: 347 G----AQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECM-RQEMEALLYQY 401
G +Q WL E+L + A HPP S E + + +L
Sbjct: 154 GEIRASQLGWLAEELATPAPD--GTILALHHPPI-PSVLDMAVTVELRDQAALGRVLRGT 210
Query: 402 GVDIVFSGHVH 412
V + +GH+H
Sbjct: 211 DVRAILAGHLH 221
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 Length = 322 | Back alignment and structure |
|---|
Score = 50.7 bits (120), Expect = 6e-07
Identities = 35/273 (12%), Positives = 65/273 (23%), Gaps = 84/273 (30%)
Query: 217 TVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRFM 276
V + ++ +GD+ + M
Sbjct: 43 AVLQWRRERVQCVVQLGDIIDGHN----------------------RRRDASDRALDTVM 80
Query: 277 EPLTS-RVPMMVIEGNHEIEPQ-----VAGITFKSYLTRFAVPSEESGSNSNFYYSFNAG 330
L + V + + GNHE ++ + T S+ G + Y A
Sbjct: 81 AELDACSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAP 140
Query: 331 GVHFIMLGAY----------------------------------------------VDYN 344
F++L AY +
Sbjct: 141 NFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGG 200
Query: 345 STGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYG-V 403
+ Q WL L D L + P ++ + + ++L + V
Sbjct: 201 FSEQQLQWLDAVLTLSDHKQERVLIFSHLPVH--PCAADPICLAWNHEAVLSVLRSHQSV 258
Query: 404 DIVFSGHVHAYERMNRVYNYTLDACGPVYITVG 436
+GH H D+ G +IT+
Sbjct: 259 LCFIAGHDHD-------GGRCTDSSGAQHITLE 284
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 48.3 bits (114), Expect = 7e-06
Identities = 52/457 (11%), Positives = 121/457 (26%), Gaps = 124/457 (27%)
Query: 23 KVVLVVAGGTLQRIPTTLQGPFE----PVTRRFDPSLRRGSDDLPMNHTRLKKNVTSNFP 78
K + + + F+ + P + + +L + N+
Sbjct: 163 KTWVALD--VCLSYKVQCKMDFKIFWLNLKNCNSP------ETVLEMLQKLLYQIDPNWT 214
Query: 79 EQ--IALAISSPTSMWVSWVSGDAQIGSNVTP-----LDPSTVASDVWYGKQSGKY---- 127
+ + I + + + S L +V K +
Sbjct: 215 SRSDHSSNIKLRIHSIQAELRR--LLKSKPYENCLLVLL------NVQNAKAWNAFNLSC 266
Query: 128 ----TSKRGGNATVYSQLYPFKGLLNYTSGIIHHVKIDGLDPG-TKYYYKCGDSK-IPAM 181
T++ V L ++ H+ +D T + K +
Sbjct: 267 KILLTTR---FKQVTDFL---------SAATTTHISLDHHSMTLTP-----DEVKSLLLK 309
Query: 182 SAEHVFETLPLPSPTSYPHRIAVIGDLGLTSNSSTTVDHLIQNDPSLILMVGDLTYANQY 241
+ + LP T+ P R+++I + + T D+ + + + + +
Sbjct: 310 YLDCRPQDLPREVLTTNPRRLSIIAE--SIRDGLATWDNWKHVNCDKLTTIIESSLNVLE 367
Query: 242 LTTGGKAASCY-SCA-FP-DAPI-RETYQPRWDGWGRFMEPLTSRVPMMV---------I 288
K + + FP A I W + M+V +
Sbjct: 368 PAEYRK---MFDRLSVFPPSAHIPTILLSLIWFD-------VIKSDVMVVVNKLHKYSLV 417
Query: 289 EGN--------HEI----------EPQVAGITFKSYLTRFAVPSEESGSNSNFYYSFNAG 330
E I E + Y S++ Y ++
Sbjct: 418 EKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHI 477
Query: 331 GVHFIMLGA----------YVDYNSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPP----- 375
G H + ++D+ +L++ K+ T W A+
Sbjct: 478 GHHLKNIEHPERMTLFRMVFLDFR-------FLEQ---KIRHDSTAWNASGSILNTLQQL 527
Query: 376 -WYNSY-SSHYQEFECMRQEMEALLYQYGVDIVFSGH 410
+Y Y + ++E + + L + +++ S +
Sbjct: 528 KFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKY 564
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 Length = 260 | Back alignment and structure |
|---|
Score = 47.1 bits (111), Expect = 7e-06
Identities = 27/232 (11%), Positives = 69/232 (29%), Gaps = 17/232 (7%)
Query: 199 PHRIAVIGDL-GLTSNSSTTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFP 257
P ++ I + + + P ++++VG++ N+ L + A
Sbjct: 5 PRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILK-NEALEKEYERAHLARREPN 63
Query: 258 DAPIRETYQPRWDGWGRFMEPLTS-RVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEE 316
I E + +F + V V+ G ++ ++ +Y A P+
Sbjct: 64 RKVIHENEHYIIETLDKFFREIGELGVKTFVVPGKNDAPLKI--FLRAAYEAETAYPN-- 119
Query: 317 SGSNSNFYYSFNAGGVHFIMLGAYVDYN--STGAQYAWLKEDLHKLDRTVTPWLAAAW-- 372
+ ++ G I G + + + + + + + V
Sbjct: 120 -IRVLHEGFAGWRGEFEVIGFGGLLTEHEFEEDFVLKYPRWYVEYILKFVNELKPRRLVT 178
Query: 373 --HPPWYNSYSSHYQEFECMR--QEMEALLYQYGVDIVFSGHVH-AYERMNR 419
+ P + E + ++ ++ GHV +E +
Sbjct: 179 IFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVGKGHELVGN 230
|
| >2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis} Length = 527 | Back alignment and structure |
|---|
Score = 45.2 bits (106), Expect = 4e-05
Identities = 60/337 (17%), Positives = 100/337 (29%), Gaps = 67/337 (19%)
Query: 157 HVKIDGLDPGTKYYY--KCGDSKIPAMSAEHVFETLPLPSPTSYPHRIAVIGDLGLTSNS 214
HV+ DGL+P YYY K G P +TLP P A
Sbjct: 76 HVEADGLEPNKVYYYRFKTGHELSPVGK----TKTLPAPGANVPQMTFAFASCQQYEHGY 131
Query: 215 STTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRW--DGW 272
T H+ + L+ +GD Y K + + + + Y+ R
Sbjct: 132 YTAYKHMAKEKLDLVFHLGDYIYEYGPNEYVSKTGNVRTHNSAEIITLQDYRNRHAQYRS 191
Query: 273 GRFMEPLTSRVPMMVIEGNHEIEPQVAG------ITFKSYLTRFA-------------VP 313
++ + P +V +HE+E A + ++++ R A +
Sbjct: 192 DANLKAAHAAFPWVVTWDDHEVENNYANKIPEKGQSVEAFVLRRAAAYQAYYEHMPLRIS 251
Query: 314 SEESGSNSNFYYSFNAGG-VHFIMLGA--YVDYNSTG--------------------AQY 350
S +G + Y F G F +L Y D + Q
Sbjct: 252 SLPNGPDMQLYRHFTYGNLASFNVLDTRQYRDDQANNDGNKPPSDESRNPNRTLLGKEQE 311
Query: 351 AWLKEDLHKLDRT---------VTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQY 401
WL +L W P Y+ S + R+ + +
Sbjct: 312 QWLFNNLGSSTAHWNVLAQQIFFAKWNFGTSASPIYSMDSWDGYPAQ--RERVINFIKSK 369
Query: 402 GVD--IVFSGHVHAYERMNRVYNYTLDACGPVYITVG 436
++ +V +G VHA + N +D G
Sbjct: 370 NLNNVVVLTGDVHA----SWASNLHVDFEKTSSKIFG 402
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 580 | |||
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 100.0 | |
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 100.0 | |
| 2yeq_A | 527 | Apased, PHOD, alkaline phosphatase D; hydrolase, p | 100.0 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 100.0 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 99.96 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 99.89 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 99.87 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 99.87 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 99.79 | |
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 99.51 | |
| 1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent pho | 99.5 | |
| 2q8u_A | 336 | Exonuclease, putative; structural genomics, joint | 99.46 | |
| 1nnw_A | 252 | Hypothetical protein; structural genomics, PSI, pr | 99.2 | |
| 3av0_A | 386 | DNA double-strand break repair protein MRE11; DNA | 99.19 | |
| 3ck2_A | 176 | Conserved uncharacterized protein (predicted phosp | 99.18 | |
| 2a22_A | 215 | Vacuolar protein sorting 29; alpha-beta-BETA-alpha | 99.18 | |
| 1z2w_A | 192 | Vacuolar protein sorting 29; VPS29, retromer, phos | 99.17 | |
| 3tho_B | 379 | Exonuclease, putative; adenosine triphosphate, bac | 99.17 | |
| 3rl5_A | 296 | Metallophosphoesterase mpped2; alpha-beta fold, me | 99.17 | |
| 3qfm_A | 270 | SAPH, putative uncharacterized protein; sandwich f | 99.15 | |
| 1xm7_A | 195 | Hypothetical protein AQ_1665; structural genomics, | 99.0 | |
| 1s3l_A | 190 | Hypothetical protein MJ0936; phosphodiesterase, nu | 98.98 | |
| 2kkn_A | 178 | Uncharacterized protein; protein phosphatase 2A ho | 98.95 | |
| 3rqz_A | 246 | Metallophosphoesterase; PSI-biology, midwest cente | 98.92 | |
| 1ii7_A | 333 | MRE11 nuclease; RAD50, DNA double-strand break rep | 98.91 | |
| 3t1i_A | 431 | Double-strand break repair protein MRE11A; DNA rep | 98.87 | |
| 4fbw_A | 417 | DNA repair protein RAD32; DNA double-strand break | 98.82 | |
| 4fbk_A | 472 | DNA repair and telomere maintenance protein NBS1, | 98.71 | |
| 2z1a_A | 552 | 5'-nucleotidase; metal-binding, nucleotide-binding | 98.51 | |
| 1su1_A | 208 | Hypothetical protein YFCE; structural genomics, ph | 98.46 | |
| 1hp1_A | 516 | 5'-nucleotidase; metallophosphatase, dinuclear, me | 98.43 | |
| 3ztv_A | 579 | NAD nucleotidase, NADN; hydrolase, NAD pyrophospha | 98.35 | |
| 3qfk_A | 527 | Uncharacterized protein; structural genomics, cent | 98.33 | |
| 4h2g_A | 546 | 5'-nucleotidase; dimer, hydrolase, phosphatase, ex | 98.3 | |
| 2wdc_A | 562 | SOXB, sulfur oxidation protein SOXB; sulfur-sulfur | 98.25 | |
| 3ive_A | 509 | Nucleotidase; structural genomics, PSI-2, protein | 98.22 | |
| 3c9f_A | 557 | 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, p | 98.15 | |
| 1t71_A | 281 | Phosphatase, conserved HYPO; crystal, X-RAY crysta | 98.1 | |
| 1g5b_A | 221 | Serine/threonine protein phosphatase; bacteriophag | 98.07 | |
| 1t70_A | 255 | Phosphatase; crystal, X-RAY crystallography, struc | 97.95 | |
| 2z06_A | 252 | Putative uncharacterized protein TTHA0625; metal b | 97.92 | |
| 3gve_A | 341 | YFKN protein; alpha-beta-BETA-alpha sandwich, stru | 97.82 | |
| 3jyf_A | 339 | 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- n | 97.54 | |
| 4h1s_A | 530 | 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo | 97.46 | |
| 2ede_A | 114 | Netrin receptor DCC; tumor suppressor protein DCC, | 96.87 | |
| 2edd_A | 123 | Netrin receptor DCC; tumor suppressor protein DCC, | 96.61 | |
| 1x5l_A | 111 | Ephrin type-A receptor 8; FN3 domain, structural g | 96.55 | |
| 1x5f_A | 120 | Neogenin; RGM binding, fibronectin type III domain | 96.51 | |
| 1x4x_A | 106 | Fibronectin type-III domain containing protein 3A; | 96.51 | |
| 1x4y_A | 114 | Biregional cell adhesion molecule-related/DOWN- re | 96.48 | |
| 2ed8_A | 106 | Netrin receptor DCC; tumor suppressor protein DCC, | 96.34 | |
| 1x5a_A | 107 | Ephrin type-A receptor 1; tyrosine-protein kinase | 96.3 | |
| 1x5g_A | 116 | Neogenin; RGM binding, fibronectin type III domain | 96.3 | |
| 2qjc_A | 262 | Diadenosine tetraphosphatase, putative; putative d | 96.29 | |
| 2haz_A | 105 | N-CAM 1, neural cell adhesion molecule 1; fibronec | 96.27 | |
| 3e0j_A | 476 | DNA polymerase subunit delta-2; DNA polymerase del | 96.2 | |
| 1x5j_A | 113 | Neogenin; RGM binding, fibronectin type III domain | 96.19 | |
| 2edy_A | 103 | Receptor-type tyrosine-protein phosphatase F; LAR | 96.19 | |
| 2dm4_A | 108 | Sortilin-related receptor; beta-sandwich, sorting | 96.11 | |
| 2djs_A | 108 | Ephrin type-B receptor 1; tyrosine-protein kinase | 96.07 | |
| 2ee3_A | 108 | Collagen alpha-1(XX) chain; KIAA1510, structural g | 96.07 | |
| 2crz_A | 110 | Fibronectin type-III domain containing protein 3A; | 96.06 | |
| 2dfj_A | 280 | Diadenosinetetraphosphatase; helices and strands m | 96.04 | |
| 1x5x_A | 109 | Fibronectin type-III domain containing protein 3A; | 96.01 | |
| 3teu_A | 98 | Fibcon; FN3 domain, fibronectin TPYE III domain, c | 95.99 | |
| 2e7h_A | 109 | Ephrin type-B receptor 4; FN3 domain, tyrosine- pr | 95.98 | |
| 2ee2_A | 119 | Contactin-1; neural cell surface protein F3, glyco | 95.95 | |
| 1x5z_A | 115 | Receptor-type tyrosine-protein phosphatase delta; | 95.92 | |
| 2ed7_A | 119 | Netrin receptor DCC; tumor suppressor protein DCC, | 95.76 | |
| 2ed9_A | 124 | Netrin receptor DCC; tumor suppressor protein DCC, | 95.76 | |
| 3b83_A | 100 | Ten-D3; beta sheet, computational redesigned prote | 95.74 | |
| 2rb8_A | 104 | Tenascin; beta sheet,loop design, alternative spli | 95.58 | |
| 2dju_A | 106 | Receptor-type tyrosine-protein phosphatase F; LAR | 95.58 | |
| 1wfo_A | 130 | Sidekick 2; FN3, cell adhesion, structural genomic | 95.58 | |
| 3p4l_A | 211 | Neogenin; iron homeostasis, hemojuvelin receptor, | 95.55 | |
| 2kbg_A | 114 | N-CAM 2, neural cell adhesion molecule 2; fibronec | 95.51 | |
| 2dle_A | 104 | Receptor-type tyrosine-protein phosphatase ETA; pr | 95.51 | |
| 2edx_A | 134 | Protein tyrosine phosphatase, receptor type, F; LA | 95.49 | |
| 2cui_A | 112 | Tenascin-X; fibronectin type III domain, extracell | 95.41 | |
| 2dkm_A | 104 | Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, | 95.39 | |
| 2ie4_C | 309 | PP2A-alpha;, serine/threonine-protein phosphatase | 95.36 | |
| 3n1f_C | 102 | Cell adhesion molecule-related/DOWN-regulated BY; | 95.21 | |
| 2dmk_A | 127 | Midline 2 isoform 2; midline defect 2, tripartite | 95.19 | |
| 2gee_A | 203 | Hypothetical protein; fibronectin, EIIIB, cancer, | 95.17 | |
| 1va9_A | 122 | DOWN syndrome cell adhesion molecule like- protein | 95.16 | |
| 1qr4_A | 186 | Protein (tenascin); fibronectin type-III, heparin, | 95.12 | |
| 2cum_A | 105 | Tenascin-X; hexabrachion-like, fibronectin type II | 95.12 | |
| 3tes_A | 98 | Tencon; fibronectin type III domain, FN3, consensu | 95.11 | |
| 1k85_A | 88 | Chitinase A1; fibronectin type III domain, chitin | 95.0 | |
| 2dbj_A | 124 | Proto-oncogene tyrosine-protein kinase MER precurs | 95.0 | |
| 1x5h_A | 132 | Neogenin; RGM binding, fibronectin type III domain | 94.97 | |
| 3f7q_A | 234 | Integrin beta-4, GP150; hemidesmosome, cell adhesi | 94.95 | |
| 1fjm_A | 330 | Protein serine/threonine phosphatase-1 (alpha ISO | 94.94 | |
| 2dlh_A | 121 | Receptor-type tyrosine-protein phosphatase delta; | 94.9 | |
| 2z72_A | 342 | Protein-tyrosine-phosphatase; cold-active enzyme, | 94.9 | |
| 2e3v_A | 122 | Neural cell adhesion molecule 1, 140 kDa isoform; | 94.87 | |
| 2db8_A | 110 | Tripartite motif protein 9, isoform 2; ring finger | 94.78 | |
| 2cuh_A | 115 | Tenascin-X; fibronectin type III domain, extracell | 94.67 | |
| 3lpw_A | 197 | A77-A78 domain from titin; intracellular FNIII-tan | 94.58 | |
| 2vkw_A | 209 | Neural cell adhesion molecule 1,140 kDa isoform; a | 94.58 | |
| 1j8k_A | 94 | Fibronectin; EDA, TYPEIII domain, protein binding; | 94.53 | |
| 1wis_A | 124 | KIAA1514 protein; FNIII domain, sidekick-2, struct | 94.47 | |
| 2dn7_A | 107 | Receptor-type tyrosine-protein phosphatase F; LAR | 94.46 | |
| 2yux_A | 120 | Myosin-binding protein C, SLOW-type; fibronectin I | 94.43 | |
| 1x4z_A | 121 | Biregional cell adhesion molecule-related/DOWN- re | 94.4 | |
| 1x3d_A | 118 | Fibronectin type-III domain containing protein 3A; | 94.31 | |
| 2crm_A | 120 | Fibronectin type-III domain containing protein 3A; | 94.28 | |
| 3e7a_A | 299 | PP-1A, serine/threonine-protein phosphatase PP1-al | 94.25 | |
| 2yuw_A | 110 | Myosin binding protein C, SLOW type; fibronectin I | 94.06 | |
| 1uc6_A | 109 | CNTF receptor, ciliary neurotrophic factor recepto | 93.98 | |
| 3h63_A | 315 | Serine/threonine-protein phosphatase 5; metalloenz | 93.96 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 93.87 | |
| 3icf_A | 335 | PPT, serine/threonine-protein phosphatase T; IRO m | 93.85 | |
| 1oww_A | 98 | FN, fibronectin first type III module, CIG; fibron | 93.8 | |
| 1uem_A | 117 | KIAA1568 protein; immunoglobulin-like beta-sandwic | 93.79 | |
| 3k2m_C | 101 | Monobody HA4; engineered binding protein, antibody | 93.72 | |
| 1bpv_A | 112 | Titin, A71, connectin; fibronectin type III; NMR { | 93.72 | |
| 1bqu_A | 215 | Protein (GP130); cytokine receptor, glycoprotein 1 | 93.69 | |
| 3ll8_A | 357 | Serine/threonine-protein phosphatase 2B catalytic | 93.69 | |
| 1uen_A | 125 | KIAA0343 protein; immunoglobulin-like beta-sandwic | 93.61 | |
| 1qr4_A | 186 | Protein (tenascin); fibronectin type-III, heparin, | 93.61 | |
| 1x5y_A | 111 | Myosin binding protein C, fast-type; fast MYBP-C, | 93.58 | |
| 2b5i_B | 214 | Interleukin-2 receptor beta chain; four-helix bund | 93.45 | |
| 3r8q_A | 290 | Fibronectin; heparin, FNIII, heparin binding, cell | 93.37 | |
| 1cd9_B | 215 | G-CSF-R, protein (G-CSF receptor); class1 cytokine | 93.12 | |
| 2yrz_A | 118 | Integrin beta-4; GP150, CD104 antigen, structural | 93.08 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 93.01 | |
| 1aui_A | 521 | Calcineurin, serine/threonine phosphatase 2B; hydr | 92.94 | |
| 2ocf_D | 121 | Fibronectin; estrogen receptor, LBD, monobody, est | 92.92 | |
| 3mpc_A | 103 | FN3-like protein; fibronectin, FN(III), unknown fu | 92.78 | |
| 1i1r_A | 303 | GP130, interleukin-6 receptor beta chain; cytokine | 92.77 | |
| 2ibg_A | 214 | CG9211-PA, GH03927P; IHOG, fibronectin type III, p | 92.76 | |
| 1wk0_A | 137 | KIAA0970 protein; fibronectin type III domain, str | 92.7 | |
| 3lpw_A | 197 | A77-A78 domain from titin; intracellular FNIII-tan | 92.51 | |
| 3up1_A | 223 | Interleukin-7 receptor subunit alpha; cytokine rec | 92.51 | |
| 1ujt_A | 120 | KIAA1568 protein; fibronectin type III domain, str | 92.44 | |
| 3l5i_A | 290 | Interleukin-6 receptor subunit beta; cytokine rece | 92.33 | |
| 2qbw_A | 195 | PDZ-fibronectin fusion protein; fibronectin PDZ, u | 92.27 | |
| 3fl7_A | 536 | Ephrin receptor; ATP-binding, kinase, nucleotide-b | 92.16 | |
| 3qwq_B | 114 | Adnectin; cell surface receptor, tyrosine kinase, | 92.12 | |
| 1wfu_A | 120 | Unnamed protein product; FN3 domain, similar to 17 | 91.98 | |
| 3n06_B | 210 | PRL-R, prolactin receptor; PH dependence, hematopo | 91.84 | |
| 3qht_C | 97 | Monobody YSMB-1; fibronectin type III, yeast small | 91.81 | |
| 1x5i_A | 126 | Neogenin; RGM binding, fibronectin type III domain | 91.56 | |
| 3p4l_A | 211 | Neogenin; iron homeostasis, hemojuvelin receptor, | 91.48 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 91.41 | |
| 3r8q_A | 290 | Fibronectin; heparin, FNIII, heparin binding, cell | 91.39 | |
| 2jll_A | 389 | NCAM2, neural cell adhesion molecule 2; immunoglob | 91.35 | |
| 1eer_B | 227 | Epobp, erythropoietin receptor; signal transductio | 91.34 | |
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 91.13 | |
| 1wj3_A | 117 | KIAA1496 protein; beta sandwich, PANG, structural | 91.01 | |
| 1wf5_A | 121 | Sidekick 2 protein; FNIII domain, structural genom | 90.97 | |
| 1wfn_A | 119 | Sidekick 2; FN3, cell adhesion, structural genomic | 90.97 | |
| 2gee_A | 203 | Hypothetical protein; fibronectin, EIIIB, cancer, | 90.84 | |
| 1fnf_A | 368 | Fibronectin; RGD, extracellular matrix, cell adhes | 90.8 | |
| 3t04_D | 103 | Monobody 7C12; engineered binding protein, antibod | 90.7 | |
| 1uey_A | 127 | KIAA0343 protein; immunoglobulin-like beta-sandwic | 90.69 | |
| 2ic2_A | 115 | CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin t | 90.69 | |
| 1v5j_A | 108 | KIAA1355 protein, RSGI RUH-008; FN3 domain, human | 90.48 | |
| 2edb_A | 116 | Netrin receptor DCC; tumor suppressor protein DCC, | 90.4 | |
| 2d9q_B | 313 | Granulocyte colony-stimulating factor receptor; cy | 90.39 | |
| 2vkw_A | 209 | Neural cell adhesion molecule 1,140 kDa isoform; a | 89.55 | |
| 1cfb_A | 205 | Drosophila neuroglian; neural adhesion molecule; H | 89.43 | |
| 2w1n_A | 238 | O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrol | 88.85 | |
| 1cfb_A | 205 | Drosophila neuroglian; neural adhesion molecule; H | 88.71 | |
| 2ekj_A | 105 | Collagen alpha-1(XX) chain; KIAA1510, structural g | 88.58 | |
| 2q7n_A | 488 | Leukemia inhibitory factor receptor; cytokine cell | 88.52 | |
| 1fnf_A | 368 | Fibronectin; RGD, extracellular matrix, cell adhes | 88.19 | |
| 2ha1_A | 201 | Fibronectin; beta sandwich, protein-protein comple | 87.91 | |
| 3f7q_A | 234 | Integrin beta-4, GP150; hemidesmosome, cell adhesi | 87.18 | |
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 87.05 | |
| 2h41_A | 95 | Fibronectin; beta sandwich, cell adhesion, structu | 86.54 | |
| 2ibg_A | 214 | CG9211-PA, GH03927P; IHOG, fibronectin type III, p | 86.47 | |
| 3csg_A | 461 | MBP, maltose-binding protein monobody YS1 fusion, | 86.39 | |
| 1n26_A | 325 | IL-6 receptor alpha chain; transmembrane, glycopro | 84.92 | |
| 3e0g_A | 483 | Leukemia inhibitory factor receptor; IG domain, cy | 84.6 | |
| 1axi_B | 236 | HGHBP, growth hormone receptor; complex (hormone-r | 84.36 | |
| 3l5i_A | 290 | Interleukin-6 receptor subunit beta; cytokine rece | 83.01 | |
| 2b5i_C | 199 | Cytokine receptor common gamma chain; four-helix b | 82.97 | |
| 3tgx_A | 219 | Interleukin-21 receptor; class I cytokine, class I | 82.96 | |
| 3s98_A | 306 | Interferon alpha/beta receptor 1; human, type I in | 81.99 | |
| 2ha1_A | 201 | Fibronectin; beta sandwich, protein-protein comple | 81.78 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 81.45 | |
| 3mtr_A | 215 | N-CAM-1, NCAM-1, neural cell adhesion molecule 1; | 81.08 | |
| 2jll_A | 389 | NCAM2, neural cell adhesion molecule 2; immunoglob | 81.03 | |
| 2erj_C | 247 | Cytokine receptor common gamma chain; immune syste | 80.92 | |
| 1zlg_A | 680 | Anosmin 1; insulin-like growth factor receptor Cys | 80.85 |
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-69 Score=585.76 Aligned_cols=399 Identities=38% Similarity=0.693 Sum_probs=339.9
Q ss_pred CCCCCCCCCcccccCCCCCCCceEEEEeCC--CCcEEEEEEeC-CCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeE
Q 008029 58 GSDDLPMNHTRLKKNVTSNFPEQIALAISS--PTSMWVSWVSG-DAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGN 134 (580)
Q Consensus 58 ~~~~~~~~~p~~~~~~~~~~P~qi~la~~~--~~sm~V~W~T~-~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~ 134 (580)
.+.|+|+++|+++.+.....|+||||++++ .++|+|+|+|. +.. ..++|+||++++.+..++.|+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~p~~v~l~~~~~~~~~~~v~W~t~~~~~------------~~~~V~y~~~~~~~~~~~~~~ 72 (426)
T 1xzw_A 5 EDVDMPWDSDVFAVPSGYNAPQQVHITQGDYEGRGVIISWTTPYDKA------------GANKVFYWSENSKSQKRAMGT 72 (426)
T ss_dssp HHHBCCTTCGGGCCCCSTTCCEEEEEEECSSSSSCEEEEEEESSCCT------------TTTEEEEEETTCCCCEEEECE
T ss_pred ccccCCCCCCcccCCCCCCCCceEEEEECCCCCCeEEEEEEeCCCCC------------CCCEEEEecCCCCCceEEEEE
Confidence 367999999999999988999999999998 59999999997 431 468999999998888888888
Q ss_pred EEEEeeecccCCccccccccEEEEEeCCCCCCCEEEEEEEeCCCCCccceEEEEcCCCCCCCCCCeEEEEEcccCCCCCh
Q 008029 135 ATVYSQLYPFKGLLNYTSGIIHHVKIDGLDPGTKYYYKCGDSKIPAMSAEHVFETLPLPSPTSYPHRIAVIGDLGLTSNS 214 (580)
Q Consensus 135 ~~~y~~~~p~~g~~~~~~~~~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~~~F~T~p~~~~~~~~~rfav~gD~g~~~~~ 214 (580)
+.+|... ++.++++|+|+|+||+|+|+|+|||+.+ .+|++++|+|+|.+++. .++||+++||+|.....
T Consensus 73 ~~~~~~~-------~~~~~~~~~v~l~gL~p~t~Y~Yrv~~g---~~s~~~~f~T~p~~~~~-~~~~f~~~gD~~~~~~~ 141 (426)
T 1xzw_A 73 VVTYKYY-------NYTSAFIHHCTIKDLEYDTKYYYRLGFG---DAKRQFWFVTPPKPGPD-VPYVFGLIGDIGQTHDS 141 (426)
T ss_dssp EECCEET-------TEECCEEEEEEECCCCTTCEEEEEECCG---GGCEEEEEECCCCCCTT-CCEEEEEECSCTTBHHH
T ss_pred EEEEEec-------CCcCCEEEEEEECCCCCCCEEEEEECCC---CccceeEEECCCCCCCC-CCeEEEEEEeCCCCCch
Confidence 7766531 2457899999999999999999999873 58999999999986654 48999999999987555
Q ss_pred HHHHHHHHHC--CCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHHHhhhhhccCCCeEEecCCC
Q 008029 215 STTVDHLIQN--DPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRFMEPLTSRVPMMVIEGNH 292 (580)
Q Consensus 215 ~~~l~~i~~~--~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~~~l~~l~~~vP~~~v~GNH 292 (580)
..+++++.+. +|||||++||++|+++.... .+.+|+.|.+.++++.+.+|+|+++|||
T Consensus 142 ~~~l~~i~~~~~~~D~vl~~GD~~y~~~~~~~--------------------~~~~~~~~~~~l~~l~~~~P~~~v~GNH 201 (426)
T 1xzw_A 142 NTTLTHYEQNSAKGQAVLFMGDLSYSNRWPNH--------------------DNNRWDTWGRFSERSVAYQPWIWTAGNH 201 (426)
T ss_dssp HHHHHHHHHCTTCCSEEEECSCCCCGGGSGGG--------------------CTHHHHHHHHHHHHHHTTSCEECCCCGG
T ss_pred HHHHHHHHhCCCCCCEEEeCCChhhcccCCcc--------------------cchHHHHHHHHHHHHHhcCCEEEecccc
Confidence 6788888876 89999999999997543110 1357999999999998899999999999
Q ss_pred CCCCCc---ccccHHHHHhhcCCCCCCCCCCCcceEEEEeCcEEEEEEcCcccCCCcHHHHHHHHHHHHhccCCCCCeEE
Q 008029 293 EIEPQV---AGITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYVDYNSTGAQYAWLKEDLHKLDRTVTPWLA 369 (580)
Q Consensus 293 D~~~~~---~~~~f~~y~~~f~~P~~~~~~~~~~yYsfd~G~v~fI~Ldt~~~~~~~~~Q~~WLe~~L~~~~r~~~pwvI 369 (580)
|+.... ....|..|..+|.||.++.+...+.||+|++|+++||+||++.++....+|++||+++|+++++++++|+|
T Consensus 202 D~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~I 281 (426)
T 1xzw_A 202 EIDYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRASAHIIVLSSYSGFVKYSPQYKWFTSELEKVNRSETPWLI 281 (426)
T ss_dssp GCCCBGGGTBCSTTHHHHHHSCCCCGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEE
T ss_pred ccccCCccccccCChhheEEEeCCcccCCCCCCCeEEEEECCEEEEEeeCcccCCCCHHHHHHHHHHHHhhhhcCCCEEE
Confidence 997542 12467889999999987665667899999999999999999987778899999999999998877889999
Q ss_pred EEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEEccccCceeEeeccccc-----------cCCCCcEEEEeCCC
Q 008029 370 AAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYT-----------LDACGPVYITVGDG 438 (580)
Q Consensus 370 v~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR~~pv~n~~-----------~~~~G~vyIv~G~g 438 (580)
|++|+|+|+....++.+...+|+.|+++|.+++||++|+||+|.|+|+.|+++.+ .+++|++||++|+|
T Consensus 282 v~~H~P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~~~r~~p~~~~~~~~~~g~~~~~~~~~g~~yi~~G~g 361 (426)
T 1xzw_A 282 VLVHAPLYNSYEAHYMEGEAMRAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNIVNAKCTPVSDESAPVYITIGDG 361 (426)
T ss_dssp EECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSTTCCCCCEECTTSCEEEEECCS
T ss_pred EEeccCceeCCCcccCCCHHHHHHHHHHHHHhCCCEEEEcChhhheeeeeecCccccccCCccccccCCCccEEEEeCCC
Confidence 9999999987654445556789999999999999999999999999999998765 34789999999999
Q ss_pred CccccccCCCCCCCCCCCCCCCCCCcccceeecccccCCCCCCcCCCCCCCcceeeecCccEEEEEEEcCcceEEEEEEc
Q 008029 439 GNIEQVDVDHADDPGKCPSAGENLPEFGGVCHLNFTSGPAKGKFCWSKQPEWSAYRESSFGHGILEVVNSTYALWTWHRN 518 (580)
Q Consensus 439 G~~e~~~~~~~~~~~~~p~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~p~~sa~~~~~~G~~~l~v~n~t~~~~~~~~~ 518 (580)
|+.+++... | .+.+|+||+||+.+|||++|+|.|+|++.|+|+++
T Consensus 362 G~~~~~~~~-------------------------~----------~~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~ 406 (426)
T 1xzw_A 362 GNSEGLASE-------------------------M----------TQPQPSYSAFREASFGHGIFDIKNRTHAHFSWHRN 406 (426)
T ss_dssp CCTTCCCCC-------------------------B----------CSSCCTTEEEEECCCEEEEEEECSSSEEEEEEEET
T ss_pred ccccccccc-------------------------c----------CCCCCCceeEEecCCCeEEEEEEcCCeEEEEEEEC
Confidence 998764311 1 03579999999999999999999999999999999
Q ss_pred cCCCCCCccceEEEEEeC
Q 008029 519 QDNYKEDSRGDHIYIVRQ 536 (580)
Q Consensus 519 ~~~~~~~~v~d~~~i~k~ 536 (580)
+|+.. .|.|+|||+|+
T Consensus 407 ~dg~~--~~~D~~~i~~~ 422 (426)
T 1xzw_A 407 QDGAS--VEADSLWLLNR 422 (426)
T ss_dssp TSCTT--CCSEEEEEECS
T ss_pred CCCCE--EEeEEEEEEec
Confidence 99843 38999999997
|
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-68 Score=573.81 Aligned_cols=398 Identities=39% Similarity=0.692 Sum_probs=333.3
Q ss_pred CCCCCCCcccccCCCCCCCceEEEEeCC--CCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEE
Q 008029 60 DDLPMNHTRLKKNVTSNFPEQIALAISS--PTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATV 137 (580)
Q Consensus 60 ~~~~~~~p~~~~~~~~~~P~qi~la~~~--~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~ 137 (580)
.|+|+++++++.+.....|+||||++++ +++|+|+|+|.+.. ..+.|+||++++.+..++.|++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~P~~v~l~~~~~~~~~~~v~W~t~~~~------------~~~~V~~~~~~~~~~~~~~g~~~~ 68 (424)
T 2qfp_A 1 RDMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEP------------GSSAVRYWSEKNGRKRIAKGKMST 68 (424)
T ss_dssp CBCCTTSGGGCCCCSTTCCEEEEEEECSSSSSCEEEEEEESSSC------------CCCCEEEEESSSCCCEEECCEEEC
T ss_pred CCCCCCCCcccCCCCCCCCceEEEEecCCCCCeEEEEEECCCCC------------CCCEEEEEeCCCCCceEEEEEEEE
Confidence 3799999999999777799999999998 58999999996531 367899999998888889898776
Q ss_pred EeeecccCCccccccccEEEEEeCCCCCCCEEEEEEEeCCCCCccceEEEEcCCCCCCCCCCeEEEEEcccCCCCChHHH
Q 008029 138 YSQLYPFKGLLNYTSGIIHHVKIDGLDPGTKYYYKCGDSKIPAMSAEHVFETLPLPSPTSYPHRIAVIGDLGLTSNSSTT 217 (580)
Q Consensus 138 y~~~~p~~g~~~~~~~~~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~~~F~T~p~~~~~~~~~rfav~gD~g~~~~~~~~ 217 (580)
|... ++.++++|+|+|+||+|+|+|+|||+.+ .+|++++|+|+|.+++. .++||+++||+|.......+
T Consensus 69 ~~~~-------~~~~~~~~~v~l~gL~p~t~Y~Yrv~~~---~~s~~~~f~T~p~~~~~-~~~~f~~igD~~~~~~~~~~ 137 (424)
T 2qfp_A 69 YRFF-------NYSSGFIHHTTIRKLKYNTKYYYEVGLR---NTTRRFSFITPPQTGLD-VPYTFGLIGDLGQSFDSNTT 137 (424)
T ss_dssp CBCS-------SCBCCEEEEEEECSCCTTCEEEEEECCS---SSCEEEEEECCCCCCTT-CCEEEEEECSCTTBHHHHHH
T ss_pred EEec-------CCCCCEEEEEEECCCCCCCEEEEEECCC---CccceEEEECCCCCCCC-CCeEEEEEEeCCCCCChHHH
Confidence 6531 3457899999999999999999999975 47999999999987654 48999999999987655567
Q ss_pred HHHHHHC--CCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHHHhhhhhccCCCeEEecCCCCCC
Q 008029 218 VDHLIQN--DPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIE 295 (580)
Q Consensus 218 l~~i~~~--~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~ 295 (580)
++++.+. +|||||++||++|++++... .+.+|+.|.+.++++.+.+|+|+++||||+.
T Consensus 138 l~~~~~~~~~~D~vl~~GDl~y~~~~~~~--------------------~~~~~~~~~~~l~~~~~~~P~~~v~GNHD~~ 197 (424)
T 2qfp_A 138 LSHYELSPKKGQTVLFVGDLSYADRYPNH--------------------DNVRWDTWGRFTERSVAYQPWIWTAGNHEIE 197 (424)
T ss_dssp HHHHHTCSSCCCEEEECSCCSCGGGSGGG--------------------CTHHHHHHHHHHHHHHTTSCEEECCCHHHHC
T ss_pred HHHHHhCCCCCCEEEEcCccccccccccc--------------------cchHHHHHHHHHHHHHhcCCeEeecCCcccc
Confidence 8888775 89999999999997643110 1357899999999988889999999999987
Q ss_pred CCc---ccccHHHHHhhcCCCCCCCCCCCcceEEEEeCcEEEEEEcCcccCCCcHHHHHHHHHHHHhccCCCCCeEEEEe
Q 008029 296 PQV---AGITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYVDYNSTGAQYAWLKEDLHKLDRTVTPWLAAAW 372 (580)
Q Consensus 296 ~~~---~~~~f~~y~~~f~~P~~~~~~~~~~yYsfd~G~v~fI~Ldt~~~~~~~~~Q~~WLe~~L~~~~r~~~pwvIv~~ 372 (580)
... ....|..|..+|.||........+.||+|++|+++||+||++..+....+|++||+++|+++++++++|+|+++
T Consensus 198 ~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~ 277 (424)
T 2qfp_A 198 FAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLM 277 (424)
T ss_dssp CBGGGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEEEC
T ss_pred cCCcccccccchhhhhhccCCccccCCCCCcEEEEEECCEEEEEecCCccCCCcHHHHHHHHHHHhhhcccCCCEEEEEe
Confidence 432 12357889999999976555567899999999999999999877766789999999999998877789999999
Q ss_pred CCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEEccccCceeEeeccccc-----------cCCCCcEEEEeCCCCcc
Q 008029 373 HPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYT-----------LDACGPVYITVGDGGNI 441 (580)
Q Consensus 373 H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR~~pv~n~~-----------~~~~G~vyIv~G~gG~~ 441 (580)
|+|+|++...++.+...+|+.|+++|.+++||++|+||+|.|+|+.|+++.. .+++|++||++|+||+.
T Consensus 278 H~P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~~~vyi~~G~gg~~ 357 (424)
T 2qfp_A 278 HSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNY 357 (424)
T ss_dssp SSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCCCSCEECTTSCEEEEECCSCTT
T ss_pred CcCceecCcccccccHHHHHHHHHHHHHhCCcEEEECChhhhheeccccCcceeccCCccccccCCCCcEEEEecCCCCc
Confidence 9999987655555566789999999999999999999999999999986532 24689999999999998
Q ss_pred ccccCCCCCCCCCCCCCCCCCCcccceeecccccCCCCCCcCCCCCCCcceeeecCccEEEEEEEcCcceEEEEEEccCC
Q 008029 442 EQVDVDHADDPGKCPSAGENLPEFGGVCHLNFTSGPAKGKFCWSKQPEWSAYRESSFGHGILEVVNSTYALWTWHRNQDN 521 (580)
Q Consensus 442 e~~~~~~~~~~~~~p~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~p~~sa~~~~~~G~~~l~v~n~t~~~~~~~~~~~~ 521 (580)
++.... | ...+|+||+||+.+|||++|+|.|+|++.|+|++++||
T Consensus 358 ~~~~~~-------------------------~----------~~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~~g 402 (424)
T 2qfp_A 358 GVIDSN-------------------------M----------IQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDG 402 (424)
T ss_dssp SCCCCC-------------------------B----------CSSCCTTEEEEECCCEEEEEEECSSSEEEEEEEETTSC
T ss_pred cccCcc-------------------------C----------CCCCCCcceEEecCCCEEEEEEEcCcEEEEEEEECCCC
Confidence 764311 1 13579999999999999999999999999999999998
Q ss_pred CCCCccceEEEEEeCC
Q 008029 522 YKEDSRGDHIYIVRQP 537 (580)
Q Consensus 522 ~~~~~v~d~~~i~k~~ 537 (580)
... +.|+|||+|+.
T Consensus 403 ~~~--~~D~~~i~~~~ 416 (424)
T 2qfp_A 403 VAV--EADSVWFFNRH 416 (424)
T ss_dssp TTC--CSEEEEEECTT
T ss_pred CEE--eeeEEEEEecc
Confidence 321 47999999983
|
| >2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-37 Score=340.60 Aligned_cols=321 Identities=19% Similarity=0.272 Sum_probs=220.5
Q ss_pred CceEEEEeCC--CCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCC--cceEEeeEEEEEeeecccCCccccccc
Q 008029 78 PEQIALAISS--PTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGK--YTSKRGGNATVYSQLYPFKGLLNYTSG 153 (580)
Q Consensus 78 P~qi~la~~~--~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~--~~~~a~g~~~~y~~~~p~~g~~~~~~~ 153 (580)
|=..-++.++ ++++ |.|.+..+..-.. ..+. .....|+|..+.+. ....+.|+..+. | ..+
T Consensus 8 ~f~~GvasGDp~~~~v-ilWtr~~p~~~~~-~~~~--~~~~~v~~eva~d~~f~~~v~~g~~~a~----~-------~~~ 72 (527)
T 2yeq_A 8 PFTLGVASGDPLSDSV-VLWTRLAPDPLNG-GGMP--KQAVPVKWEVAKDEHFRKIVRKGTEMAK----P-------SLA 72 (527)
T ss_dssp SCTTCEEEECCCSSCE-EEEEECCSBGGGT-BCCC--SSCEEEEEEEESSTTSSSEEEEEEEEEC----G-------GGT
T ss_pred CccccccccCCCCCeE-EEEEecCCcccCC-CCCC--CCceEEEEEEecCCccccceEeeeEEec----C-------CCc
Confidence 3333466677 6666 7799865420000 0010 12346666655433 345555665432 1 246
Q ss_pred cEEEEEeCCCCCCCEEEEEEEeCCCCCccceEEEEcCCCCCCCCCCeEEEEEcccCCCCChHHHHHHHHHCCCCEEEEcc
Q 008029 154 IIHHVKIDGLDPGTKYYYKCGDSKIPAMSAEHVFETLPLPSPTSYPHRIAVIGDLGLTSNSSTTVDHLIQNDPSLILMVG 233 (580)
Q Consensus 154 ~~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~~~F~T~p~~~~~~~~~rfav~gD~g~~~~~~~~l~~i~~~~pDfvl~~G 233 (580)
++|+|+|+||+|+|+|+|||+.++ .+|++++|+|+|.+++...++||+++||.+.......++++|.+.+|||+||+|
T Consensus 73 ~t~~v~v~gL~P~t~Y~Yr~~~~~--~~S~~g~frT~P~~~~~~~~~rfa~~sc~~~~~g~~~~~~~ia~~~~D~vlhlG 150 (527)
T 2yeq_A 73 HSVHVEADGLEPNKVYYYRFKTGH--ELSPVGKTKTLPAPGANVPQMTFAFASCQQYEHGYYTAYKHMAKEKLDLVFHLG 150 (527)
T ss_dssp TEEEEEECSCCTTCEEEEEEEETT--EECCCEEEECCCCTTCCCCCEEEEEECCCCGGGCCCHHHHHHTTSCCSEEEECS
T ss_pred eEEEeecCCcCCCCEEEEEEEeCC--CcCCCceEEcCCCCCCCCCCeEEEEEecCCCCCCccHHHHHHHhcCCCEEEecC
Confidence 899999999999999999999875 689999999999876544589999999998754445678888888999999999
Q ss_pred cccccccccccCCCCCcccccCCC-CCccccccHHHHHHHH--HhhhhhccCCCeEEecCCCCCCCCcccc---------
Q 008029 234 DLTYANQYLTTGGKAASCYSCAFP-DAPIRETYQPRWDGWG--RFMEPLTSRVPMMVIEGNHEIEPQVAGI--------- 301 (580)
Q Consensus 234 Dl~Y~d~~~~~GG~~~~c~~~~~~-~~p~~e~y~~~wd~~~--~~l~~l~~~vP~~~v~GNHD~~~~~~~~--------- 301 (580)
|++|++.....+ ......+..+. .....+.|+.+|..+. ..++.+.+.+|+|+++||||+.++....
T Consensus 151 D~iY~d~~~~~~-~~~~~~R~~~~~e~~tl~~yr~~y~~~~~dp~lq~~~a~~P~i~~wDDHE~~nn~~~~~~~~~~~~~ 229 (527)
T 2yeq_A 151 DYIYEYGPNEYV-SKTGNVRTHNSAEIITLQDYRNRHAQYRSDANLKAAHAAFPWVVTWDDHEVENNYANKIPEKGQSVE 229 (527)
T ss_dssp CSSCCCCTTSSC-CTTCCCSCCSSSSCCSHHHHHHHHHHHHTCHHHHHHHHHSEEEECCCSTTTSTTCBTTBCSTTCCHH
T ss_pred CcccCCCCCccc-ccccccccCCcccccCHHHHHHHHHHHhCCHHHHHHHhcCCEEEecccccccCCCCCCcccccCCcc
Confidence 999997542110 00000000000 0112345777776654 3477788899999999999998654321
Q ss_pred cH-----HHHHhhc-CCCCCC----CCCCCcceEEEEeCc-EEEEEEcCcccCC----------------------CcHH
Q 008029 302 TF-----KSYLTRF-AVPSEE----SGSNSNFYYSFNAGG-VHFIMLGAYVDYN----------------------STGA 348 (580)
Q Consensus 302 ~f-----~~y~~~f-~~P~~~----~~~~~~~yYsfd~G~-v~fI~Ldt~~~~~----------------------~~~~ 348 (580)
.| .+|+.+| .||... .+.....||+|++|+ ++||+||++.... .+.+
T Consensus 230 ~f~~rr~~A~~ay~e~~P~~~~~~p~~~~~~~y~sf~~G~lv~~i~LDtR~yr~~~~~~~~~~~~~~~~~~~~~~~lG~~ 309 (527)
T 2yeq_A 230 AFVLRRAAAYQAYYEHMPLRISSLPNGPDMQLYRHFTYGNLASFNVLDTRQYRDDQANNDGNKPPSDESRNPNRTLLGKE 309 (527)
T ss_dssp HHHHHHHHHHHHHHHHSCCCGGGCCBTTBCCCCEEEEETTTEEEEECCSSSSCCCCGGGSSEECCCHHHHCTTCCSSCHH
T ss_pred cHHHHHHHHHHHHHHhCCCCcccCCCCCCceEEEEEEcCCcceEEEEeccccccccccccccccccccccCCcccccCHH
Confidence 01 1233333 344331 123457899999999 9999999975321 3689
Q ss_pred HHHHHHHHHHhccCCCCCeEEEEeCCCCccCCC----------CCcchhHHHHHHHHHHHHhcCC--cEEEEccccCcee
Q 008029 349 QYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYS----------SHYQEFECMRQEMEALLYQYGV--DIVFSGHVHAYER 416 (580)
Q Consensus 349 Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~----------~~~~~~~~~r~~l~~Ll~ky~V--dlvlsGH~H~yeR 416 (580)
|++||+++|++ ++++|+||+.|+|++.... ..|......|+.|+++|.+++| +++|+||+|.+++
T Consensus 310 Q~~WL~~~L~~---s~a~W~Iv~s~~p~~~~~~~~g~~~~~~~D~W~g~~~~R~~Ll~~l~~~~v~n~vvLsGDvH~~~~ 386 (527)
T 2yeq_A 310 QEQWLFNNLGS---STAHWNVLAQQIFFAKWNFGTSASPIYSMDSWDGYPAQRERVINFIKSKNLNNVVVLTGDVHASWA 386 (527)
T ss_dssp HHHHHHHHHHH---CCSSEEEEECSSCCSCCCSSCSSSCCEETTSGGGSHHHHHHHHHHHHHTTCCCEEEEECSSSSEEE
T ss_pred HHHHHHHHHhc---CCCCeEEEEeCCcccccccCCCcccccCccchhccHHHHHHHHHHHHHhCCCCEEEEEcchHHHhH
Confidence 99999999998 5689999999999987532 2334455679999999999998 4999999999999
Q ss_pred Eee
Q 008029 417 MNR 419 (580)
Q Consensus 417 ~~p 419 (580)
+..
T Consensus 387 ~~~ 389 (527)
T 2yeq_A 387 SNL 389 (527)
T ss_dssp EEE
T ss_pred hhc
Confidence 864
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-34 Score=298.45 Aligned_cols=254 Identities=15% Similarity=0.202 Sum_probs=185.4
Q ss_pred CeEEEEEcccCCCCChHHHH-----HHHHHCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHH-
Q 008029 199 PHRIAVIGDLGLTSNSSTTV-----DHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGW- 272 (580)
Q Consensus 199 ~~rfav~gD~g~~~~~~~~l-----~~i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~- 272 (580)
++||+++||+|.+...+..+ +.+.+.+|||||++||++|. +... ..+++|...
T Consensus 3 ~l~f~~igD~g~g~~~q~~va~~m~~~~~~~~pd~vl~~GD~~y~-G~~~--------------------~~d~~~~~~f 61 (342)
T 3tgh_A 3 QLRFASLGDWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFID-GVKG--------------------LNDPAWKNLY 61 (342)
T ss_dssp CEEEEECCSCBSCCHHHHHHHHHHHHHHHHTTCCEEEECSCSBTT-CCCS--------------------TTCTHHHHHT
T ss_pred eEEEEEEecCCCCCchHHHHHHHHHHHHhhcCCCEEEECCCcccC-CCCc--------------------CccHHHHHHH
Confidence 68999999999875443322 22335799999999999986 3210 012345433
Q ss_pred HHhhhhh--ccCCCeEEecCCCCCCCCcccc-cHHH-------------------HHhhcCCCCCCCCCCCcceEEE---
Q 008029 273 GRFMEPL--TSRVPMMVIEGNHEIEPQVAGI-TFKS-------------------YLTRFAVPSEESGSNSNFYYSF--- 327 (580)
Q Consensus 273 ~~~l~~l--~~~vP~~~v~GNHD~~~~~~~~-~f~~-------------------y~~~f~~P~~~~~~~~~~yYsf--- 327 (580)
.+.++.+ ..++|+++++||||+..+...+ .+.. ...||.||. .||+|
T Consensus 62 ~~~~~~~~~~~~~P~~~vlGNHD~~~~~~aq~~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~P~--------~yY~~~~~ 133 (342)
T 3tgh_A 62 EDVYSEEKGDMYMPFFTVLGTRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADATNYPKWIMPN--------YWYHYFTH 133 (342)
T ss_dssp TTTSCCGGGTTCSEEEECCCHHHHTSCHHHHHHHHHC---------------CCCSSCEEECSS--------SSEEEEEE
T ss_pred HHHhhhhhhhhCCCEEEeCCCCccCCCchHhhhhhhcccccccccccccccccccCCCCccCCc--------ceEEEEEE
Confidence 3333333 3579999999999997653221 1111 234566664 57765
Q ss_pred -Ee---------C----cEEEEEEcCcccCC----------CcHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCC
Q 008029 328 -NA---------G----GVHFIMLGAYVDYN----------STGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSH 383 (580)
Q Consensus 328 -d~---------G----~v~fI~Ldt~~~~~----------~~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~ 383 (580)
.. | .++||+|||..... ...+|++||+++|++ ++|+||++|+|+|++...
T Consensus 134 f~~~~~~~~~~~g~~~~~v~fi~LDT~~l~~~~~~~~~~~~~~~~Ql~WLe~~L~~-----~~~~IV~~HhP~~~~~~~- 207 (342)
T 3tgh_A 134 FTVSSGPSIVKTGHKDLAAAFIFIDTWVLSSNFPYKKIHEKAWNDLKSQLSVAKKI-----ADFIIVVGDQPIYSSGYS- 207 (342)
T ss_dssp EEEC---------CEEEEEEEEECCTTTTSTTCSCHHHHHHHHHHHHHHHHHHHHH-----CSEEEEECSSCSSCSSTT-
T ss_pred eeccccccccccCCCCceEEEEEEeCcccccCCcccccchHHHHHHHHHHHHhhcc-----CCcEEEEECCCCCCCCCC-
Confidence 32 3 49999999964321 135899999999954 479999999999987532
Q ss_pred cchhHHHHHHHHHHHHhcCCcEEEEccccCceeEeeccccccCCCCcEEEEeCCCCccccccCCCCCCCCCCCCCCCCCC
Q 008029 384 YQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDACGPVYITVGDGGNIEQVDVDHADDPGKCPSAGENLP 463 (580)
Q Consensus 384 ~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyIv~G~gG~~e~~~~~~~~~~~~~p~~~~~~~ 463 (580)
.....+++.|++||++|+|+++|+||+|.|+|..+ +|+.||++|+||......
T Consensus 208 -~~~~~l~~~l~~ll~~~~VdlvlsGH~H~~~~~~~--------~g~~~iv~Ga~g~~~~~~------------------ 260 (342)
T 3tgh_A 208 -RGSSYLAYYLLPLLKDAEVDLYISGHDNNMEVIED--------NDMAHITCGSGSMSQGKS------------------ 260 (342)
T ss_dssp -CCCHHHHHHTHHHHHHTTCCEEEECSSSSEEEEEE--------TTEEEEEECCSSCCCCCC------------------
T ss_pred -CCcHHHHHHHHHHHHHcCCCEEEECCCcceeEEee--------CCcEEEEeCccccccccC------------------
Confidence 23356789999999999999999999999999974 579999999998754211
Q ss_pred cccceeecccccCCCCCCcCCCCCCCcceeeecCccEEEEEEEcCcceEEEEEEccCCCCCCccceEEEEEeCCCCC
Q 008029 464 EFGGVCHLNFTSGPAKGKFCWSKQPEWSAYRESSFGHGILEVVNSTYALWTWHRNQDNYKEDSRGDHIYIVRQPELC 540 (580)
Q Consensus 464 ~~gg~~~~~~~~~~~~~~~~~~~~p~~sa~~~~~~G~~~l~v~n~t~~~~~~~~~~~~~~~~~v~d~~~i~k~~~~~ 540 (580)
...++|++|+...+||.++++ +++.+.++|+.+.+| ++.|+++|.|+..+-
T Consensus 261 ---------------------~~~~~~s~f~~~~~Gf~~l~v-~~~~l~~~~~~~~~G----~vld~~~i~k~~~~~ 311 (342)
T 3tgh_A 261 ---------------------GMKNSKSLFFSSDIGFCVHEL-SNNGIVTKFVSSKKG----EVIYTHKLNIKKKKT 311 (342)
T ss_dssp ---------------------SSCCTTEEEEECSSEEEEEEE-ETTEEEEEEEETTTT----EEEEEEEEECCCCSS
T ss_pred ---------------------CCCCCcceeecCCCcEEEEEE-ECCEEEEEEEECCCC----cEEEEEEEECCCCcc
Confidence 023678999999999999999 678899999986676 499999999996653
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.5e-29 Score=255.20 Aligned_cols=257 Identities=19% Similarity=0.278 Sum_probs=174.4
Q ss_pred CeEEEEEcccCCCCC-------h---HHHHHH-HHHCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHH
Q 008029 199 PHRIAVIGDLGLTSN-------S---STTVDH-LIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQP 267 (580)
Q Consensus 199 ~~rfav~gD~g~~~~-------~---~~~l~~-i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~ 267 (580)
++||+++||+|.... . .+.+.+ +.+.+|||||++||++|.++.... ...
T Consensus 6 ~~~~~~isD~h~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~vv~~GD~~~~~g~~~~--------------------~~~ 65 (313)
T 1ute_A 6 ILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDA--------------------KDK 65 (313)
T ss_dssp CEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSST--------------------TCT
T ss_pred ceEEEEEcccCCCCCccccCchHHHHHHHHHHHHHhcCCCEEEECCCccCcCCCCCc--------------------chH
Confidence 699999999998742 1 122333 334699999999999987532111 011
Q ss_pred HHHHHH-Hhhhhhcc-CCCeEEecCCCCCCCCccc-ccHHHHHhhcCCCCCCCCCCCcceEEEEe------CcEEEEEEc
Q 008029 268 RWDGWG-RFMEPLTS-RVPMMVIEGNHEIEPQVAG-ITFKSYLTRFAVPSEESGSNSNFYYSFNA------GGVHFIMLG 338 (580)
Q Consensus 268 ~wd~~~-~~l~~l~~-~vP~~~v~GNHD~~~~~~~-~~f~~y~~~f~~P~~~~~~~~~~yYsfd~------G~v~fI~Ld 338 (580)
+|.... +.++.... .+|+++++||||....... ..|.....+|.+| ..||++++ ++++||+||
T Consensus 66 ~~~~~~~~~~~~~~l~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~--------~~~y~~~~~~~~~~~~~~~i~ld 137 (313)
T 1ute_A 66 RFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFP--------SPYYRLRFKIPRSNVSVAIFMLD 137 (313)
T ss_dssp HHHHHTTTTSCSGGGTTCCEEECCCHHHHHSCHHHHHHGGGTSTTEECC--------SSSEEEEEECTTSSCEEEEEECC
T ss_pred HHHHHHHHHcCchhhcCCCEEEECCCCccCCCccccccccccCCCccCc--------ccceEEEEecCCCCceEEEEEEE
Confidence 232222 22221112 7999999999998543211 0111112344444 35889888 599999999
Q ss_pred CcccC-----------------CCcHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhc
Q 008029 339 AYVDY-----------------NSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQY 401 (580)
Q Consensus 339 t~~~~-----------------~~~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky 401 (580)
+.... ....+|++||+++|++.. .+|+|+++|+|++..... .....+++.|.++|.++
T Consensus 138 s~~~~~~~~~~~~~~~~~~~~~~~~~~q~~wL~~~L~~~~---~~~~iv~~H~p~~~~~~~--~~~~~~~~~l~~~l~~~ 212 (313)
T 1ute_A 138 TVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAAAK---EDYVLVAGHYPVWSIAEH--GPTHCLVKQLLPLLTTH 212 (313)
T ss_dssp HHHHHCCGGGSTTCSCCSCSCHHHHHHHHHHHHHHHHHCC---CSEEEEECSSCSSCCSSS--CCCHHHHHHTHHHHHHT
T ss_pred ChHHhCcCccccccccCCccccchHHHHHHHHHHHHHhCC---CCeEEEEECCCCccCCCC--CCcHHHHHHHHHHHHHc
Confidence 86411 125899999999999863 479999999999876532 12345678999999999
Q ss_pred CCcEEEEccccCceeEeeccccccCCCCcEEEEeCCCCccccccCCCCCCCCCCCCCCCCCCcccceeecccccCCCCCC
Q 008029 402 GVDIVFSGHVHAYERMNRVYNYTLDACGPVYITVGDGGNIEQVDVDHADDPGKCPSAGENLPEFGGVCHLNFTSGPAKGK 481 (580)
Q Consensus 402 ~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyIv~G~gG~~e~~~~~~~~~~~~~p~~~~~~~~~gg~~~~~~~~~~~~~~ 481 (580)
+|+++|+||+|.+++..+ .+|+.||++|++|....... +.+
T Consensus 213 ~v~~~l~GH~H~~~~~~~-------~~g~~~i~~gs~~~~~~~~~-~~~------------------------------- 253 (313)
T 1ute_A 213 KVTAYLCGHDHNLQYLQD-------ENGLGFVLSGAGNFMDPSKK-HLR------------------------------- 253 (313)
T ss_dssp TCSEEEECSSSSEEEEEC-------TTCCEEEEECBSSCCCCCCT-TGG-------------------------------
T ss_pred CCcEEEECChhhhhhccC-------CCCceEEEECCCcCcCcccc-ccc-------------------------------
Confidence 999999999999998863 56899999999986432110 000
Q ss_pred cCCCCCCCcceeeec----CccEEEEEEEcCcceEEEEEEccCCCCCCccceEEEEEeC
Q 008029 482 FCWSKQPEWSAYRES----SFGHGILEVVNSTYALWTWHRNQDNYKEDSRGDHIYIVRQ 536 (580)
Q Consensus 482 ~~~~~~p~~sa~~~~----~~G~~~l~v~n~t~~~~~~~~~~~~~~~~~v~d~~~i~k~ 536 (580)
...+.++.|... ..||++|+| +++.+.++|++. +| ++.|+++|.|.
T Consensus 254 ---~~~~~~~~~~~~~~~~~~gy~~l~v-~~~~~~~~~~~~-~g----~~~~~~~l~~~ 303 (313)
T 1ute_A 254 ---KVPNGYLRFHFGAENSLGGFAYVEI-TPKEMSVTYIEA-SG----KSLFKTKLPRR 303 (313)
T ss_dssp ---GSCTTCEEEEECCTTSCCEEEEEEE-CSSCEEEEEEET-TS----CEEEEEEECCC
T ss_pred ---cCCCcccceeccCcCCCCceEEEEE-EcCEEEEEEEcC-CC----cEEEEEEeccc
Confidence 001224445432 379999999 677899999986 54 38999999887
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A | Back alignment and structure |
|---|
Probab=99.89 E-value=3.8e-22 Score=206.12 Aligned_cols=197 Identities=18% Similarity=0.171 Sum_probs=136.4
Q ss_pred CCeEEEEEcccCCCCC-------------hHHHHHHHHH--CCCCEEEEcccccccccccccCCCCCcccccCCCCCccc
Q 008029 198 YPHRIAVIGDLGLTSN-------------SSTTVDHLIQ--NDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIR 262 (580)
Q Consensus 198 ~~~rfav~gD~g~~~~-------------~~~~l~~i~~--~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~ 262 (580)
.++||++++|+|.... ..++++.+.+ .++|+||++||+++.. .
T Consensus 24 ~~~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~~-------~--------------- 81 (330)
T 3ib7_A 24 PDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKG-------E--------------- 81 (330)
T ss_dssp CSEEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTTC-------C---------------
T ss_pred CCeEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCC-------C---------------
Confidence 4799999999997421 1345566665 6999999999999641 1
Q ss_pred cccHHHHHHHHHhhhhhc--cCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCCCCCCCcceEEEEeCcEEEEEEcCc
Q 008029 263 ETYQPRWDGWGRFMEPLT--SRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAY 340 (580)
Q Consensus 263 e~y~~~wd~~~~~l~~l~--~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsfd~G~v~fI~Ldt~ 340 (580)
...|..+.+.++.+. .++|+++++||||.. ..+ ...+.-.. ......+|+++.++++|++||+.
T Consensus 82 ---~~~~~~~~~~l~~l~~~~~~pv~~v~GNHD~~-----~~~---~~~~~~~~---~~~~~~~~~~~~~~~~~i~lds~ 147 (330)
T 3ib7_A 82 ---PAAYRKLRGLVEPFAAQLGAELVWVMGNHDDR-----AEL---RKFLLDEA---PSMAPLDRVCMIDGLRIIVLDTS 147 (330)
T ss_dssp ---HHHHHHHHHHHHHHHHHHTCEEEECCCTTSCH-----HHH---HHHHHCCC---CCCSCCCEEEEETTEEEEECCCC
T ss_pred ---HHHHHHHHHHHHHHHhhcCCCEEEeCCCCCCH-----HHH---HHHhcccc---cccCCcceEEEeCCEEEEEecCC
Confidence 124455556666553 278999999999973 122 22221110 12345789999999999999987
Q ss_pred cc----CCCcHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcch-hHHHHHHHHHHHHhcCCcEEEEccccCce
Q 008029 341 VD----YNSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQE-FECMRQEMEALLYQYGVDIVFSGHVHAYE 415 (580)
Q Consensus 341 ~~----~~~~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~-~~~~r~~l~~Ll~ky~VdlvlsGH~H~ye 415 (580)
.. .....+|++||++.|++.... ++|+++|+|++......... ....++.+.++|.+++|+++|+||+|...
T Consensus 148 ~~~~~~~~~~~~q~~wl~~~l~~~~~~---~~iv~~Hh~p~~~~~~~~~~~~~~~~~~l~~~l~~~~v~~v~~GH~H~~~ 224 (330)
T 3ib7_A 148 VPGHHHGEIRASQLGWLAEELATPAPD---GTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYST 224 (330)
T ss_dssp CTTCCSBCCCHHHHHHHHHHTTSCCTT---CEEEECSSCSSCCSSGGGGGGSBSCHHHHHHHHTTSSEEEEEECSSSSCE
T ss_pred CCCCCCCccCHHHHHHHHHHHHhcccC---CeEEEEECCCCCCCccccccccccCHHHHHHHHhccCceEEEECCCCCcc
Confidence 53 235789999999999986432 26777787776643221110 01125688899999999999999999987
Q ss_pred eEeeccccccCCCCcEEEEeCCCCcc
Q 008029 416 RMNRVYNYTLDACGPVYITVGDGGNI 441 (580)
Q Consensus 416 R~~pv~n~~~~~~G~vyIv~G~gG~~ 441 (580)
... .+|+.+++.|+.+..
T Consensus 225 ~~~--------~~g~~~~~~gs~~~~ 242 (330)
T 3ib7_A 225 NAT--------FVGIPVSVASATCYT 242 (330)
T ss_dssp EEE--------ETTEEEEECCCSSCE
T ss_pred cce--------ECCEEEEecCcceec
Confidence 543 358888888887753
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.5e-21 Score=199.74 Aligned_cols=206 Identities=17% Similarity=0.176 Sum_probs=135.1
Q ss_pred CeEEEEEcccCCCCC--------------------hHHHHHHHHHCCCCEEEEcccccccccccccCCCCCcccccCCCC
Q 008029 199 PHRIAVIGDLGLTSN--------------------SSTTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPD 258 (580)
Q Consensus 199 ~~rfav~gD~g~~~~--------------------~~~~l~~i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~ 258 (580)
++||++++|+|.... ..++++.+.+.+||+||++||+++......
T Consensus 5 ~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GD~~~~~~~~~--------------- 69 (322)
T 2nxf_A 5 VFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRR--------------- 69 (322)
T ss_dssp SEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHT---------------
T ss_pred ceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccCCCCCcc---------------
Confidence 699999999998752 123445555679999999999997521100
Q ss_pred CccccccHHHHHHHHHhhhhhccCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCC--------CCCCCcceEEEEe-
Q 008029 259 APIRETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEE--------SGSNSNFYYSFNA- 329 (580)
Q Consensus 259 ~p~~e~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~--------~~~~~~~yYsfd~- 329 (580)
......++.+.+.++.+ .+|+++++||||.... ....+...+..+... -...+..||+|+.
T Consensus 70 ----~~~~~~~~~~~~~l~~~--~~p~~~v~GNHD~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~ 139 (322)
T 2nxf_A 70 ----DASDRALDTVMAELDAC--SVDVHHVWGNHEFYNF----SRPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPA 139 (322)
T ss_dssp ----TCHHHHHHHHHHHHHTT--CSEEEECCCHHHHHHC----CHHHHHTSTTCCCC------CEECGGGTCCCEEEEEE
T ss_pred ----hHHHHHHHHHHHHHHhc--CCcEEEecCCCCcccC----CHHHHhhhhCCcccccccccccccCCCCceEEEEecC
Confidence 00012233334444433 6899999999998421 112344444311100 0002357899998
Q ss_pred CcEEEEEEcCccc----------------------------------------------CCCcHHHHHHHHHHHHhccCC
Q 008029 330 GGVHFIMLGAYVD----------------------------------------------YNSTGAQYAWLKEDLHKLDRT 363 (580)
Q Consensus 330 G~v~fI~Ldt~~~----------------------------------------------~~~~~~Q~~WLe~~L~~~~r~ 363 (580)
++++||+||+... .....+|++||+++|+++.+.
T Consensus 140 ~~~~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~~~~~ 219 (322)
T 2nxf_A 140 PNFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHK 219 (322)
T ss_dssp TTEEEEECCTTSBCSSSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEcCceecccccCCCChhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHHHHhc
Confidence 9999999998642 012489999999999986532
Q ss_pred CCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhc-CCcEEEEccccCceeEeeccccccCCCCcEEEEeCCC
Q 008029 364 VTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQY-GVDIVFSGHVHAYERMNRVYNYTLDACGPVYITVGDG 438 (580)
Q Consensus 364 ~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky-~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyIv~G~g 438 (580)
..++||++|+|++....... .....++.+.++|.++ +|+++|+||+|.+++.. +.+|+.|++.|+.
T Consensus 220 -~~~~iv~~H~p~~~~~~~~~-~~~~~~~~~~~ll~~~~~v~~~~~GH~H~~~~~~-------~~~g~~~i~~~~~ 286 (322)
T 2nxf_A 220 -QERVLIFSHLPVHPCAADPI-CLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCT-------DSSGAQHITLEGV 286 (322)
T ss_dssp -TCEEEEEESSCCCTTSSCGG-GSCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEE-------CTTSCEEEECCCG
T ss_pred -CCcEEEEEccCCCCCCCCcc-ccccCHHHHHHHHhcCCCeEEEEcCCcCCCCcee-------ccCCceEEEecch
Confidence 24689999999987643210 0111256889999999 79999999999998874 2468888887765
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A | Back alignment and structure |
|---|
Probab=99.87 E-value=6.7e-21 Score=191.35 Aligned_cols=191 Identities=16% Similarity=0.220 Sum_probs=129.2
Q ss_pred eEEEEEcccCCCC---------Ch----HHHHHHHHHC--CCCEEEEcccccccccccccCCCCCcccccCCCCCccccc
Q 008029 200 HRIAVIGDLGLTS---------NS----STTVDHLIQN--DPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRET 264 (580)
Q Consensus 200 ~rfav~gD~g~~~---------~~----~~~l~~i~~~--~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~ 264 (580)
+||++++|+|... .. .++++.+.+. ++|+||++||+++.. .
T Consensus 1 mri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~~-------~----------------- 56 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCG-------R----------------- 56 (274)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSC-------C-----------------
T ss_pred CEEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCC-------C-----------------
Confidence 5899999999874 11 2344555543 689999999999631 1
Q ss_pred cHHHHHHHHHhhhhhccCCCeEEecCCCCCCCCcccccHH-HHHhhc-CCCCCCCCCCCcceEEEEeCcEEEEEEcCccc
Q 008029 265 YQPRWDGWGRFMEPLTSRVPMMVIEGNHEIEPQVAGITFK-SYLTRF-AVPSEESGSNSNFYYSFNAGGVHFIMLGAYVD 342 (580)
Q Consensus 265 y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~-~y~~~f-~~P~~~~~~~~~~yYsfd~G~v~fI~Ldt~~~ 342 (580)
...|+.+.+.++.+ ++|+++++||||... .+. .+...| .++.+ .+..+|+++.++++|++||+...
T Consensus 57 -~~~~~~~~~~l~~l--~~p~~~v~GNHD~~~-----~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~ld~~~~ 124 (274)
T 3d03_A 57 -PEEYQVARQILGSL--NYPLYLIPGNHDDKA-----LFLEYLQPLCPQLGSD----ANNMRCAVDDFATRLLFIDSSRA 124 (274)
T ss_dssp -HHHHHHHHHHHTTC--SSCEEEECCTTSCHH-----HHHHHHGGGSGGGCSC----GGGCCEEECSSSSEEEECCCCCT
T ss_pred -HHHHHHHHHHHHhc--CCCEEEECCCCCCHH-----HHHHHhhhhhcCcccC----CCceEEEEEeCCEEEEEEeCCCC
Confidence 12455566666665 789999999999842 111 121111 11111 02467999999999999998643
Q ss_pred ----CCCcHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcch-hHHHHHHHHHHHHhc-CCcEEEEccccCcee
Q 008029 343 ----YNSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQE-FECMRQEMEALLYQY-GVDIVFSGHVHAYER 416 (580)
Q Consensus 343 ----~~~~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~-~~~~r~~l~~Ll~ky-~VdlvlsGH~H~yeR 416 (580)
.....+|++||++.|++.. ..++|+++|+|++......... ....++.+.+++.++ +|+++|+||+|..+.
T Consensus 125 ~~~~~~~~~~~~~wl~~~l~~~~---~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~ 201 (274)
T 3d03_A 125 GTSKGWLTDETISWLEAQLFEGG---DKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTM 201 (274)
T ss_dssp TCSSBCCCHHHHHHHHHHHHHHT---TSCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEE
T ss_pred CCCCCeeCHHHHHHHHHHHHhCC---CCCEEEEECCCCcccCCcccCcccCcCHHHHHHHHHhCCCceEEEeCCCCCchh
Confidence 2347899999999999852 3579999999988754221110 011246788999999 899999999999877
Q ss_pred EeeccccccCCCCcEEEEeCC
Q 008029 417 MNRVYNYTLDACGPVYITVGD 437 (580)
Q Consensus 417 ~~pv~n~~~~~~G~vyIv~G~ 437 (580)
.. .+|..++++++
T Consensus 202 ~~--------~~g~~~~~~pg 214 (274)
T 3d03_A 202 TQ--------YRQALISTLPG 214 (274)
T ss_dssp EE--------ETTEEEEECCC
T ss_pred he--------ECCEEEEEcCC
Confidence 53 24655555543
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.79 E-value=4.4e-18 Score=183.76 Aligned_cols=194 Identities=17% Similarity=0.219 Sum_probs=125.3
Q ss_pred CCeEEEEEcccCCCCC-----------------------hH----HHHHHHHHCCCCEEEEcccccccccccccCCCCCc
Q 008029 198 YPHRIAVIGDLGLTSN-----------------------SS----TTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAAS 250 (580)
Q Consensus 198 ~~~rfav~gD~g~~~~-----------------------~~----~~l~~i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~ 250 (580)
.++||++++|+|.... .. ..++.+.+.+||+||++||+++.. .
T Consensus 38 ~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~-------~--- 107 (443)
T 2xmo_A 38 RNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTNNG-------E--- 107 (443)
T ss_dssp CCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCSEEEEESCCBSSC-------C---
T ss_pred CCeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCCEEEECCCCCCCC-------C---
Confidence 4799999999998632 12 234444567899999999999641 1
Q ss_pred ccccCCCCCccccccHHHHHHHHHhhhhhc-cCCCeEEecCCCCCCCCccc------------ccHHHHHhhcCCCCCC-
Q 008029 251 CYSCAFPDAPIRETYQPRWDGWGRFMEPLT-SRVPMMVIEGNHEIEPQVAG------------ITFKSYLTRFAVPSEE- 316 (580)
Q Consensus 251 c~~~~~~~~p~~e~y~~~wd~~~~~l~~l~-~~vP~~~v~GNHD~~~~~~~------------~~f~~y~~~f~~P~~~- 316 (580)
...++.+.+.++.+. ..+|+++++||||....... .....|...|.-....
T Consensus 108 ---------------~~~~~~~~~~l~~l~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (443)
T 2xmo_A 108 ---------------KTSHEELAKKLTQVEKNGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFSKIYSDFGYED 172 (443)
T ss_dssp ---------------HHHHHHHHHHHHHHHHTTCEEEEECCTTTSSCTTCEEEETTEEEECCCCCHHHHHHHTCCCCCTT
T ss_pred ---------------HHHHHHHHHHHHHHHhCCCeEEEECCcCCCCCccccccCCcccccccccCHHHHHHHhhhcChhh
Confidence 123444555555553 37899999999998643211 0123344444311100
Q ss_pred C---CCCCcceEEEEeCcEEEEEEcCccc------------CCCcHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCC
Q 008029 317 S---GSNSNFYYSFNAGGVHFIMLGAYVD------------YNSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYS 381 (580)
Q Consensus 317 ~---~~~~~~yYsfd~G~v~fI~Ldt~~~------------~~~~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~ 381 (580)
. ......|+.+..++++||+||+... .....+|++||++.|+++.... ..+|+++|+|++....
T Consensus 173 ~~~~~~~~~~y~~~~~~~~~~i~Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~~~-~~~Iv~~H~p~~~~~~ 251 (443)
T 2xmo_A 173 AISSDEFSLSYLAAPSSKVWLLMLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKKNG-AKLIPVLHHNLTDHND 251 (443)
T ss_dssp CSEECSSSSCEEECSBSSEEEEECCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHHTT-CEEEEECSSBSSCSSC
T ss_pred hhccCCCCceEEEecCCCEEEEEeeCCCcCcccccCCCCcCCccCHHHHHHHHHHHHHHHHcC-CeEEEEECCCCccccc
Confidence 0 0012234445578999999998642 1246899999999999875322 4588999999876532
Q ss_pred CCcch-hHHHHHHHHHHHHhcCCcEEEEccccCceeE
Q 008029 382 SHYQE-FECMRQEMEALLYQYGVDIVFSGHVHAYERM 417 (580)
Q Consensus 382 ~~~~~-~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR~ 417 (580)
..... ....++.+.++|.+++|+++|+||+|.....
T Consensus 252 ~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~~~ 288 (443)
T 2xmo_A 252 VIQKGYTINYNQQVIDALTEGAMDFSLSGHIHTQNIR 288 (443)
T ss_dssp C--CCSBCTTHHHHHHHHHHTTCCEEEECSSCSCEEE
T ss_pred ccccccccccHHHHHHHHHHcCCeEEEECCcccCchh
Confidence 21100 0112568889999999999999999997664
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.51 E-value=1.2e-13 Score=137.66 Aligned_cols=218 Identities=11% Similarity=0.178 Sum_probs=110.7
Q ss_pred CeEEEEEcccCCCCCh-HHHHHHHHHCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHH----HHHHH
Q 008029 199 PHRIAVIGDLGLTSNS-STTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPR----WDGWG 273 (580)
Q Consensus 199 ~~rfav~gD~g~~~~~-~~~l~~i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~----wd~~~ 273 (580)
++||+++||+|..... .+.++.+.+.++|+||++||+++........ . ..+..-. .|..+.|+.. .+.+.
T Consensus 5 ~mri~~iSDlH~~~~~~~~~l~~~~~~~~D~vi~~GDl~~~~~~~~~~-~-~~~~~~~---~p~~~~~~~~~~~~~~~~~ 79 (260)
T 2yvt_A 5 PRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEALEKEY-E-RAHLARR---EPNRKVIHENEHYIIETLD 79 (260)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHHHCCSEEEEESCCCCCHHHHHHH-H-HHHHTTC---CCCTHHHHHHHHHHHHHHH
T ss_pred eEEEEEEeecCCChHHHHHHHHHHHhcCCCEEEECCCCCCccCcchhh-h-hhhhhhc---ccchhhhhHHHHHHHHHHH
Confidence 5899999999987543 4556666667999999999999542100000 0 0000000 0011112111 02233
Q ss_pred Hhhhhhcc-CCCeEEecCCCCCCCCcccccHHHHHhhcC-CCCCCCCCCCcceEEEEeCcEEEEEEcCcccC-CCcHHHH
Q 008029 274 RFMEPLTS-RVPMMVIEGNHEIEPQVAGITFKSYLTRFA-VPSEESGSNSNFYYSFNAGGVHFIMLGAYVDY-NSTGAQY 350 (580)
Q Consensus 274 ~~l~~l~~-~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~-~P~~~~~~~~~~yYsfd~G~v~fI~Ldt~~~~-~~~~~Q~ 350 (580)
+.++.+.. .+|+++++||||.... ..+........ .|... ... ....+.+++++|++++..... ....+++
T Consensus 80 ~~l~~l~~~~~pv~~v~GNHD~~~~---~~~~~~~~~~~~~~~~~--~l~-~~~~~~~~~~~i~g~~~~~~~~~~~~~~~ 153 (260)
T 2yvt_A 80 KFFREIGELGVKTFVVPGKNDAPLK---IFLRAAYEAETAYPNIR--VLH-EGFAGWRGEFEVIGFGGLLTEHEFEEDFV 153 (260)
T ss_dssp HHHHHHHTTCSEEEEECCTTSCCHH---HHHHHHHHTTTTCTTEE--ECS-SEEEEETTTEEEEEECSEEESSCCBSSSS
T ss_pred HHHHHHHhcCCcEEEEcCCCCchhh---hhHHHHhhhccCCcceE--Eec-CcceEEECCEEEEecCCCcCCCCcCHHHH
Confidence 34444432 6899999999997421 00011111111 01000 000 112377889999999853211 1112222
Q ss_pred H----HHH----HHHHhccCCCCCeEEEEeCCCCccCCCCCc--chhHHHHHHHHHHHHhcCCcEEEEccccCceeEeec
Q 008029 351 A----WLK----EDLHKLDRTVTPWLAAAWHPPWYNSYSSHY--QEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRV 420 (580)
Q Consensus 351 ~----WLe----~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~--~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR~~pv 420 (580)
. |+. +.|++.. . ...|++.|+|++....... .........+.+++.+++++++++||+| .... .
T Consensus 154 ~~~~~~~~~~~l~~l~~~~--~-~~~Il~~H~pp~~~~~d~~~~~~~~~~~~~l~~~~~~~~~~~vl~GH~H-~~~~-~- 227 (260)
T 2yvt_A 154 LKYPRWYVEYILKFVNELK--P-RRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVG-KGHE-L- 227 (260)
T ss_dssp CEEEHHHHHHHGGGGGGSC--C-CEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSC-CEEE-E-
T ss_pred hhcchhhHHHHHHHHHhcC--C-CCEEEEECCCccccccccCcccccccCcHHHHHHHHHhCCCEEEECCcc-CCcE-E-
Confidence 2 443 3333322 2 3468889998875311110 0000012456778888999999999999 3222 1
Q ss_pred cccccCCCCcEEEEeCCCC
Q 008029 421 YNYTLDACGPVYITVGDGG 439 (580)
Q Consensus 421 ~n~~~~~~G~vyIv~G~gG 439 (580)
-++++++..|+.+
T Consensus 228 ------~~~~~~in~Gs~~ 240 (260)
T 2yvt_A 228 ------VGNTIVVNPGEFE 240 (260)
T ss_dssp ------ETTEEEEECCBGG
T ss_pred ------eCCEEEEeCCCCC
Confidence 1356666667654
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.50 E-value=1.1e-13 Score=134.41 Aligned_cols=188 Identities=11% Similarity=0.030 Sum_probs=107.5
Q ss_pred CeEEEEEcccCCCCCh-HHHHHHHHHCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHHHhhh
Q 008029 199 PHRIAVIGDLGLTSNS-STTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRFME 277 (580)
Q Consensus 199 ~~rfav~gD~g~~~~~-~~~l~~i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~~~l~ 277 (580)
++||+++||+|..... .+.++.+.+.++|+|+++||+++.. .. ...+..+.+.++
T Consensus 5 ~mri~~iSD~H~~~~~~~~~~~~~~~~~~D~vi~~GDl~~~~-------~~-----------------~~~~~~~~~~l~ 60 (228)
T 1uf3_A 5 VRYILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPKA-------AK-----------------SRDYAAFFRILS 60 (228)
T ss_dssp CCEEEEEECCTTCHHHHHHHHTHHHHHTCSEEEEESCSSCTT-------CC-----------------HHHHHHHHHHHG
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHhhcCCCEEEECCCCCCCC-------CC-----------------HHHHHHHHHHHH
Confidence 5899999999986432 2334444455899999999999531 00 112333444444
Q ss_pred hhccCCCeEEecCCCCCCCCcccccHHHHHhhc----CCCCCCCCCCCcceEEEEeC-cEEEEEEcCcc--cCCCcHH--
Q 008029 278 PLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRF----AVPSEESGSNSNFYYSFNAG-GVHFIMLGAYV--DYNSTGA-- 348 (580)
Q Consensus 278 ~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f----~~P~~~~~~~~~~yYsfd~G-~v~fI~Ldt~~--~~~~~~~-- 348 (580)
.+ .+|+++++||||.... ..+...+ ..|... ...+ ..+.++ +++|+.++... .+....+
T Consensus 61 ~~--~~pv~~v~GNHD~~~~------~~~~~~~~~~~~~~~~~--~l~~--~~~~~~~~~~i~g~~~~~~~~~~~~~~~~ 128 (228)
T 1uf3_A 61 EA--HLPTAYVPGPQDAPIW------EYLREAANVELVHPEMR--NVHE--TFTFWRGPYLVAGVGGEIADEGEPEEHEA 128 (228)
T ss_dssp GG--CSCEEEECCTTSCSHH------HHHHHHHHHHHHCTTEE--ECBT--SEEEETTTEEEEEECSEEESSSCCBSSSS
T ss_pred hc--CCcEEEECCCCCchhH------HHHHhhhhhhccCcceE--Eccc--ceEeeCCCcEEecCCCCcCCCCccChhhc
Confidence 33 6899999999998421 1111111 011100 0001 124456 89999887532 1111222
Q ss_pred ------HHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEEccccCceeEeeccc
Q 008029 349 ------QYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYN 422 (580)
Q Consensus 349 ------Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR~~pv~n 422 (580)
+.+|+++.|++.. ..+.|++.|+|++...... .. ...+.+++.+++++++++||+|. ... .
T Consensus 129 ~~~~~~~~~~~~~~l~~~~---~~~~il~~H~p~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~GH~H~-~~~-~--- 195 (228)
T 1uf3_A 129 LRYPAWVAEYRLKALWELK---DYPKIFLFHTMPYHKGLNE-QG----SHEVAHLIKTHNPLLVLVAGKGQ-KHE-M--- 195 (228)
T ss_dssp CEEEHHHHHHHHGGGGGSC---SCCEEEEESSCBCBTTTBT-TS----BHHHHHHHHHHCCSEEEECCSSC-EEE-E---
T ss_pred ccchhhhHHHHHHHHHhCC---CCCeEEEEccCcccCCccc-cC----HHHHHHHHHHhCCCEEEEccccc-Ccc-c---
Confidence 2344455555543 2358999999987642111 11 13566788889999999999993 221 1
Q ss_pred cccCCCCcEEEEeCCCC
Q 008029 423 YTLDACGPVYITVGDGG 439 (580)
Q Consensus 423 ~~~~~~G~vyIv~G~gG 439 (580)
.+++.++..|+.+
T Consensus 196 ----~~~~~~in~Gs~~ 208 (228)
T 1uf3_A 196 ----LGASWVVVPGDLS 208 (228)
T ss_dssp ----ETTEEEEECCBGG
T ss_pred ----cCCceEEEecccC
Confidence 2456667667654
|
| >2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A | Back alignment and structure |
|---|
Probab=99.46 E-value=1.8e-13 Score=142.53 Aligned_cols=189 Identities=15% Similarity=0.098 Sum_probs=99.5
Q ss_pred CCeEEEEEcccCCC----CC-------------hHHHHHHHHHCCCCEEEEccc-ccccccccccCCCCCcccccCCCCC
Q 008029 198 YPHRIAVIGDLGLT----SN-------------SSTTVDHLIQNDPSLILMVGD-LTYANQYLTTGGKAASCYSCAFPDA 259 (580)
Q Consensus 198 ~~~rfav~gD~g~~----~~-------------~~~~l~~i~~~~pDfvl~~GD-l~Y~d~~~~~GG~~~~c~~~~~~~~ 259 (580)
..+||++++|+|.+ .. ...+++.+.+.+||+||++|| +++.. .
T Consensus 17 ~~mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~~~D~vliaGD~l~d~~-------~------------ 77 (336)
T 2q8u_A 17 KELKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRN-------N------------ 77 (336)
T ss_dssp CEEEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHHTCSEEEEESCSBSCSS-------C------------
T ss_pred CceEEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHhCCCEEEECCccccCCC-------C------------
Confidence 36999999999976 21 123344445679999999999 66321 1
Q ss_pred ccccccHHHHHHHHHhhhhhccCCCeEEecCCCCCCCCcccccHHHHHhhcC----CCCCCCCCCCcceEEEEeCcEEEE
Q 008029 260 PIRETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFA----VPSEESGSNSNFYYSFNAGGVHFI 335 (580)
Q Consensus 260 p~~e~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~----~P~~~~~~~~~~yYsfd~G~v~fI 335 (580)
+.. .....+.+.++.+...+|+++++||||... ...+..+..... +..+.. ....+.++.+++.|+
T Consensus 78 ~~~----~~~~~~~~~l~~L~~~~pv~~i~GNHD~~~---~~~~~~~l~~~g~nv~v~~~~~---~~~~~~~~~~~v~i~ 147 (336)
T 2q8u_A 78 PSV----VALHDLLDYLKRMMRTAPVVVLPGNHDWKG---LKLFGNFVTSISSDITFVMSFE---PVDVEAKRGQKVRIL 147 (336)
T ss_dssp CCH----HHHHHHHHHHHHHHHHSCEEECCC---------CHHHHHHHHHHCSSEEECCSSS---CEEEECTTSCEEEEE
T ss_pred CCH----HHHHHHHHHHHHHHhcCCEEEECCCCCccc---cccHHHHHHhcCCEEEEEeccc---ccCceEEeCCCEEEE
Confidence 111 112344555555543389999999999854 122223322211 111100 000112223678888
Q ss_pred EEcCcccC-------CCcHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHH-HHHHHHHHHhcCCcEEE
Q 008029 336 MLGAYVDY-------NSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECM-RQEMEALLYQYGVDIVF 407 (580)
Q Consensus 336 ~Ldt~~~~-------~~~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~-r~~l~~Ll~ky~Vdlvl 407 (580)
.++..... ....+|++|+.+.|...-+....+.|++.|.|.+...... .+. .. ...+...+.+.++|+++
T Consensus 148 glp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Ill~H~~~~~~~~~~-~~~-~~~~~~v~~~l~~~~~d~v~ 225 (336)
T 2q8u_A 148 PFPYPDESEALRKNEGDFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGYA-GIE-QGREIIINRALIPSVVDYAA 225 (336)
T ss_dssp EECCC-------CCSSHHHHHHHHHHHHHHHHHHTCSSEEEEEEESEETTCC----------CCCEECGGGSCTTSSEEE
T ss_pred ECCCCCHHHHHHHhhHHHHHHHHHHHHHHHHhccCCCCCEEEEECccccCCCCCC-Ccc-chhhcccCHHHccccCCEEE
Confidence 88632211 1135678999888865310124579999999987532110 000 00 00111123456899999
Q ss_pred EccccCceeE
Q 008029 408 SGHVHAYERM 417 (580)
Q Consensus 408 sGH~H~yeR~ 417 (580)
+||+|..+..
T Consensus 226 ~GH~H~~~~~ 235 (336)
T 2q8u_A 226 LGHIHSFREI 235 (336)
T ss_dssp EESCSSCEEE
T ss_pred EccccCceEe
Confidence 9999998765
|
| >1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A | Back alignment and structure |
|---|
Probab=99.20 E-value=1.7e-11 Score=121.88 Aligned_cols=187 Identities=10% Similarity=0.021 Sum_probs=99.7
Q ss_pred eEEEEEcccCCCCCh-HHHHHHHH---HC--CCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHH
Q 008029 200 HRIAVIGDLGLTSNS-STTVDHLI---QN--DPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWG 273 (580)
Q Consensus 200 ~rfav~gD~g~~~~~-~~~l~~i~---~~--~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~ 273 (580)
+||+++||+|..... .+.++.+. +. ++|+++++||++... . . . ....
T Consensus 2 m~i~~isD~H~~~~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~~g-------~-------------~-----~--~~~~ 54 (252)
T 1nnw_A 2 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLF-------P-------------Y-----P--KEVI 54 (252)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSS-------S-------------C-----H--HHHH
T ss_pred cEEEEEeecCCCHHHHHHHHHHHHhhhhccCCCCEEEEeCccCCCC-------C-------------C-----H--HHHH
Confidence 689999999975322 34555555 55 799999999999531 1 0 0 1122
Q ss_pred HhhhhhccCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCCCCCCCcceE-EEEeCcEEEEEEcCcccCCCcHHHHHH
Q 008029 274 RFMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSNFYY-SFNAGGVHFIMLGAYVDYNSTGAQYAW 352 (580)
Q Consensus 274 ~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yY-sfd~G~v~fI~Ldt~~~~~~~~~Q~~W 352 (580)
+.+..+....|+++++||||.... .+...+. .. .+. .++........+ .+.......+|++|
T Consensus 55 ~~l~~l~~~~~~~~v~GNhD~~~~-------~~~~~~~-~~--------~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~ 117 (252)
T 1nnw_A 55 EVIKDLTKKENVKIIRGKYDQIIA-------MSDPHAT-DP--------GYIDKLELPGHVKKAL-KFTWEKLGHEGREY 117 (252)
T ss_dssp HHHHHHHHHSCEEEECCHHHHHHH-------HSCTTCS-SS--------GGGGGSSCCHHHHHHH-HHHHHHHHHHHHHH
T ss_pred HHHHhhHhhcCeeEEecchHHHhh-------ccccccC-Cc--------ccccchhhhHHHHHHH-HHHHHHCCHHHHHH
Confidence 334444333689999999996310 0000010 00 000 000000000000 00001124678899
Q ss_pred HHHHHHhccCCCCCeEEEEeCCCCccCCCC-CcchhHHHHHHHHHHHHhc-CCcEEEEccccCceeEeeccccccCCCCc
Q 008029 353 LKEDLHKLDRTVTPWLAAAWHPPWYNSYSS-HYQEFECMRQEMEALLYQY-GVDIVFSGHVHAYERMNRVYNYTLDACGP 430 (580)
Q Consensus 353 Le~~L~~~~r~~~pwvIv~~H~P~y~s~~~-~~~~~~~~r~~l~~Ll~ky-~VdlvlsGH~H~yeR~~pv~n~~~~~~G~ 430 (580)
|++.............|++.|++++..... .... ...+.+..++.++ +++++++||+|...... .+|+
T Consensus 118 L~~lp~~~~~~~~~~~i~~~H~~p~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~vi~GHtH~~~~~~--------~~~~ 187 (252)
T 1nnw_A 118 LRDLPIYLVDKIGGNEVFGVYGSPINPFDGEVLAE--QPTSYYEAIMRPVKDYEMLIVASPMYPVDAM--------TRYG 187 (252)
T ss_dssp HHTSCSCEEEEETTEEEEEESSCSSCTTTCCCCSS--CCHHHHHHHHGGGTTSSEEEESTTCSEEEEE--------ETTE
T ss_pred HHhCCceEEEeeCCcEEEEEcCCCCCCcccccCCC--CCHHHHHHHHhcCCCCCEEEECCccccceEe--------cCCe
Confidence 876332221111124677788776432211 1111 0124677788888 99999999999865432 2578
Q ss_pred EEEEeCCCCc
Q 008029 431 VYITVGDGGN 440 (580)
Q Consensus 431 vyIv~G~gG~ 440 (580)
++|..|+.|.
T Consensus 188 ~~in~Gs~~~ 197 (252)
T 1nnw_A 188 RVVCPGSVGF 197 (252)
T ss_dssp EEEEECCSSS
T ss_pred EEEECCCccC
Confidence 8899998775
|
| >3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=1.6e-10 Score=122.76 Aligned_cols=174 Identities=14% Similarity=0.090 Sum_probs=94.1
Q ss_pred CeEEEEEcccCCCCC--------------hHHHHHHHHHCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccc
Q 008029 199 PHRIAVIGDLGLTSN--------------SSTTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRET 264 (580)
Q Consensus 199 ~~rfav~gD~g~~~~--------------~~~~l~~i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~ 264 (580)
++||++++|+|.+.. ....++.+.+.+||+||++||+++.. . |.
T Consensus 20 ~mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~~~~D~VliaGDl~d~~-------~------------p~--- 77 (386)
T 3av0_A 20 HMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFNDL-------R------------PP--- 77 (386)
T ss_dssp CCEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHTTCCSEEEECSCSBSSS-------S------------CC---
T ss_pred CeEEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCC-------C------------CC---
Confidence 699999999998742 12344445567999999999998532 1 11
Q ss_pred cHHHHHHHHHhhhhhcc-CCCeEEecCCCCCCCCcccccHHHHHhh-cCCCCCCCCCCCcceEEEEeCcEEEEEEcCccc
Q 008029 265 YQPRWDGWGRFMEPLTS-RVPMMVIEGNHEIEPQVAGITFKSYLTR-FAVPSEESGSNSNFYYSFNAGGVHFIMLGAYVD 342 (580)
Q Consensus 265 y~~~wd~~~~~l~~l~~-~vP~~~v~GNHD~~~~~~~~~f~~y~~~-f~~P~~~~~~~~~~yYsfd~G~v~fI~Ldt~~~ 342 (580)
...+..+.+.++.+.. .+|+++++||||................ +..-. ...++..+-+++.++.++....
T Consensus 78 -~~~~~~~~~~l~~L~~~~~pv~~v~GNHD~~~~~~~~~~~~~l~~~v~~l~------~~~v~~~~~~~v~i~gl~~~~~ 150 (386)
T 3av0_A 78 -VKALRIAMQAFKKLHENNIKVYIVAGNHEMPRRLGEESPLALLKDYVKILD------GKDVINVNGEEIFICGTYYHKK 150 (386)
T ss_dssp -HHHHHHHHHHHHHHHHTTCEEEECCCGGGSCSSTTSCCGGGGGTTTCEECS------EEEEEEETTEEEEEEEECCCCS
T ss_pred -HHHHHHHHHHHHHHHhcCCcEEEEcCCCCCCccccccCHHHHHHHHeEEcC------CCcEEEeCCCCEEEEeCCCCCH
Confidence 1123445566666543 5899999999998643211000011111 10000 0112211225688888885432
Q ss_pred CCCcHHHHHHH---HHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEEccccCcee
Q 008029 343 YNSTGAQYAWL---KEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYER 416 (580)
Q Consensus 343 ~~~~~~Q~~WL---e~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR 416 (580)
. ......+|| ...+.. ..+.|++.|.|........+.. .+.. +. ++|++++||+|...+
T Consensus 151 ~-~~~~~~~~l~~l~~~~~~-----~~~~Ill~H~~~~~~~~~~~~~------~~~~-l~--~~d~v~~GH~H~~~~ 212 (386)
T 3av0_A 151 S-KREEMLDKLKNFESEAKN-----YKKKILMLHQGINPYIPLDYEL------EHFD-LP--KFSYYALGHIHKRIL 212 (386)
T ss_dssp T-THHHHHHHHHHHHHHHHT-----CSSEEEEECCCCTTTSSSSCSS------CGGG-SC--CCSEEEECSCCSCEE
T ss_pred H-HHHHHHHHHHHhhhhccc-----CCCEEEEECcCccccCCCCccc------CHHH-hh--hCCeEEccCCCCCcc
Confidence 2 122333343 332221 2358999999875321111110 0111 11 399999999998754
|
| >3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.18 E-value=1.1e-09 Score=103.02 Aligned_cols=58 Identities=12% Similarity=0.093 Sum_probs=41.3
Q ss_pred eEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEEccccCceeEeeccccccCCCCcEEEEeCCCCc
Q 008029 367 WLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDACGPVYITVGDGGN 440 (580)
Q Consensus 367 wvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyIv~G~gG~ 440 (580)
+.|++.|.|++.... . .+.+.+++.+++++++++||+|...... .+|+.++..|+.|.
T Consensus 78 ~~i~~~Hg~~~~~~~----~----~~~l~~~~~~~~~d~vi~GHtH~~~~~~--------~~~~~~inpGs~~~ 135 (176)
T 3ck2_A 78 TKIIQTHGHLFDINF----N----FQKLDYWAQEEEAAICLYGHLHVPSAWL--------EGKILFLNPGSISQ 135 (176)
T ss_dssp EEEEEECSGGGTTTT----C----SHHHHHHHHHTTCSEEECCSSCCEEEEE--------ETTEEEEEECCSSS
T ss_pred eEEEEECCCccCCCC----C----HHHHHHHHHhcCCCEEEECCcCCCCcEE--------ECCEEEEECCCCCc
Confidence 478888988765321 1 1356677788999999999999865432 25788888887664
|
| >2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.18 E-value=3.6e-10 Score=110.21 Aligned_cols=143 Identities=13% Similarity=0.279 Sum_probs=85.5
Q ss_pred CeEEEEEcccCCCCCh---HHHHHHHH-HCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHHH
Q 008029 199 PHRIAVIGDLGLTSNS---STTVDHLI-QNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGR 274 (580)
Q Consensus 199 ~~rfav~gD~g~~~~~---~~~l~~i~-~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~~ 274 (580)
.+||+++||+|..... .+.+.++. +.++|+|+++||++.. ...+
T Consensus 25 ~m~i~~iSD~H~~~~~~~l~~~l~~~~~~~~~D~vi~~GDl~~~--------------------------------~~l~ 72 (215)
T 2a22_A 25 GDLVLLIGDLKIPYGAKELPSNFRELLATDKINYVLCTGNVCSQ--------------------------------EYVE 72 (215)
T ss_dssp CEEEEEECCCCTTTTCSSCCGGGHHHHHCTTCCEEEECSCCCCH--------------------------------HHHH
T ss_pred CcEEEEEecCCCCCChHHHHHHHHHHHhcCCCCEEEECCCCCCH--------------------------------HHHH
Confidence 4899999999986422 23444443 4689999999999831 1123
Q ss_pred hhhhhccCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCCCCCCCcceEEEEeCcEEEEEEcCcccCCCcHHHHHHHH
Q 008029 275 FMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYVDYNSTGAQYAWLK 354 (580)
Q Consensus 275 ~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsfd~G~v~fI~Ldt~~~~~~~~~Q~~WLe 354 (580)
.++.+ ..|+++++||||........ .+.. .+| ....+
T Consensus 73 ~l~~~--~~~v~~V~GNHD~~~~~~~~---~~~~--~lp---------~~~~~--------------------------- 109 (215)
T 2a22_A 73 MLKNI--TKNVYIVSGDLDSAIFNPDP---ESNG--VFP---------EYVVV--------------------------- 109 (215)
T ss_dssp HHHHH--CSCEEECCCTTCCSCCBCCG---GGTB--CCC---------SEEEE---------------------------
T ss_pred HHHHc--CCCEEEecCCCcCcccccCh---hhHh--hCC---------ceEEE---------------------------
Confidence 33433 36899999999975321000 0000 001 00000
Q ss_pred HHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEEccccCceeEeeccccccCCCCcEEEE
Q 008029 355 EDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDACGPVYIT 434 (580)
Q Consensus 355 ~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyIv 434 (580)
+ ...+.|++.|.+++.... . .+.+..++.+.++|++++||+|...... .+|+.++.
T Consensus 110 ----~----~~~~~i~l~Hg~~~~~~~----~----~~~l~~~~~~~~~d~vl~GHtH~~~~~~--------~~~~~~in 165 (215)
T 2a22_A 110 ----Q----IGEFKIGLMHGNQVLPWD----D----PGSLEQWQRRLDCDILVTGHTHKLRVFE--------KNGKLFLN 165 (215)
T ss_dssp ----E----ETTEEEEEECSTTSSSTT----C----HHHHHHHHHHHTCSEEEECSSCCCEEEE--------ETTEEEEE
T ss_pred ----e----cCCeEEEEEcCCccCCCC----C----HHHHHHHHhhcCCCEEEECCcCCCccEe--------eCCEEEEE
Confidence 0 013478888855443211 1 2356667777899999999999865431 25788888
Q ss_pred eCCCCc
Q 008029 435 VGDGGN 440 (580)
Q Consensus 435 ~G~gG~ 440 (580)
.|+.+.
T Consensus 166 pGS~~~ 171 (215)
T 2a22_A 166 PGTATG 171 (215)
T ss_dssp CCCSSC
T ss_pred CCcccc
Confidence 887654
|
| >1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A | Back alignment and structure |
|---|
Probab=99.17 E-value=1.4e-09 Score=103.94 Aligned_cols=134 Identities=19% Similarity=0.318 Sum_probs=83.5
Q ss_pred CeEEEEEcccCCCCC---hHHHHHHHH-HCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHHH
Q 008029 199 PHRIAVIGDLGLTSN---SSTTVDHLI-QNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGR 274 (580)
Q Consensus 199 ~~rfav~gD~g~~~~---~~~~l~~i~-~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~~ 274 (580)
.+||+++||+|.... ..+.+.++. +.++|+|+++||++.. . ..+
T Consensus 10 mm~i~~iSD~H~~~~~~~~~~~l~~~~~~~~~d~ii~~GDl~~~----------------------------~----~~~ 57 (192)
T 1z2w_A 10 RMLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTK----------------------------E----SYD 57 (192)
T ss_dssp -CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCSEEEECSCCBSH----------------------------H----HHH
T ss_pred ceEEEEEecCCCCccchhHHHHHHHHhccCCCCEEEEcCCCCCH----------------------------H----HHH
Confidence 379999999998532 223333332 4579999999999831 1 122
Q ss_pred hhhhhccCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCCCCCCCcceEEEEeCcEEEEEEcCcccCCCcHHHHHHHH
Q 008029 275 FMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYVDYNSTGAQYAWLK 354 (580)
Q Consensus 275 ~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsfd~G~v~fI~Ldt~~~~~~~~~Q~~WLe 354 (580)
.++.+ ..|+++++||||... .+|. ...++.
T Consensus 58 ~l~~~--~~~~~~v~GNhD~~~--------------~lp~---------~~~~~~------------------------- 87 (192)
T 1z2w_A 58 YLKTL--AGDVHIVRGDFDENL--------------NYPE---------QKVVTV------------------------- 87 (192)
T ss_dssp HHHHH--CSEEEECCCTTCCCT--------------TSCS---------EEEEEE-------------------------
T ss_pred HHHhc--CCCEEEEcCCcCccc--------------cCCc---------ceEEEE-------------------------
Confidence 33333 358999999999742 1221 111111
Q ss_pred HHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEEccccCceeEeeccccccCCCCcEEEE
Q 008029 355 EDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDACGPVYIT 434 (580)
Q Consensus 355 ~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyIv 434 (580)
..+.|++.|.+++.... . .+.+..++.+.++|++++||+|...... .+|+.++.
T Consensus 88 ----------~~~~i~l~Hg~~~~~~~----~----~~~l~~~~~~~~~d~vi~GHtH~~~~~~--------~~~~~~in 141 (192)
T 1z2w_A 88 ----------GQFKIGLIHGHQVIPWG----D----MASLALLQRQFDVDILISGHTHKFEAFE--------HENKFYIN 141 (192)
T ss_dssp ----------TTEEEEEECSCCCCBTT----C----HHHHHHHHHHHSSSEEECCSSCCCEEEE--------ETTEEEEE
T ss_pred ----------CCEEEEEECCCcCCCCC----C----HHHHHHHHHhcCCCEEEECCcCcCccEe--------ECCEEEEE
Confidence 13578888855443211 1 2355667777899999999999865432 25788888
Q ss_pred eCCCCc
Q 008029 435 VGDGGN 440 (580)
Q Consensus 435 ~G~gG~ 440 (580)
.|+.+.
T Consensus 142 pGS~~~ 147 (192)
T 1z2w_A 142 PGSATG 147 (192)
T ss_dssp CCCTTC
T ss_pred CCcccc
Confidence 887654
|
| >3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C | Back alignment and structure |
|---|
Probab=99.17 E-value=2e-10 Score=121.65 Aligned_cols=189 Identities=19% Similarity=0.222 Sum_probs=102.0
Q ss_pred eEEEEEcccCCCCC----h-------------HHHHHHHHHCCCCEEEEcccccccccccccCCCCCcccccCCCCCccc
Q 008029 200 HRIAVIGDLGLTSN----S-------------STTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIR 262 (580)
Q Consensus 200 ~rfav~gD~g~~~~----~-------------~~~l~~i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~ 262 (580)
|||++++|+|.+.. . ...++.+.+.+||+||++||+++... . +..
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~~------~------------~~~ 62 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRN------N------------PSV 62 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCSEEEECSCCBSCSS------S------------CCH
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCCEEEECCCccccCC------C------------CCH
Confidence 68999999998754 1 22333344579999999999993211 0 111
Q ss_pred cccHHHHHHHHHhhhhhccCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCCCCCCCcceEEEE--eC-cEEEEEEcC
Q 008029 263 ETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSNFYYSFN--AG-GVHFIMLGA 339 (580)
Q Consensus 263 e~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsfd--~G-~v~fI~Ldt 339 (580)
..+..+.+.++.+...+|+++++||||... ...+..+... ++.+..--....-+.+. .| .+.++.+.-
T Consensus 63 ----~~~~~~~~~l~~l~~~~~v~~i~GNHD~~~---~~~~~~~~~~--~~~~~~~~~~~~~v~l~~~~G~~v~i~glp~ 133 (379)
T 3tho_B 63 ----VALHDLLDYLKRMMRTAPVVVLPGNQDWKG---LKLFGNFVTS--ISSDITFVMSFEPVDVEAKRGQKVRILPFPY 133 (379)
T ss_dssp ----HHHHHHHHHHHHHHHHSCEEECCCTTSCTT---HHHHHHHHHT--TCSSEEECCSSCCEEEECTTCCEEEEEEECC
T ss_pred ----HHHHHHHHHHHHHHhCCCEEEEcCCCcccc---Cccccccccc--cCCcceeecccceEEEEcCCCCEEEEEECCC
Confidence 223445556665543399999999999532 1111222111 12110000000112333 23 477777653
Q ss_pred cccC----CCcHHHHHHHHHHHHhc---cCCCCCeEEEEeCCCCccCCCCCcchhHH-HHHHHHHHHHhcCCcEEEEccc
Q 008029 340 YVDY----NSTGAQYAWLKEDLHKL---DRTVTPWLAAAWHPPWYNSYSSHYQEFEC-MRQEMEALLYQYGVDIVFSGHV 411 (580)
Q Consensus 340 ~~~~----~~~~~Q~~WLe~~L~~~---~r~~~pwvIv~~H~P~y~s~~~~~~~~~~-~r~~l~~Ll~ky~VdlvlsGH~ 411 (580)
.... ....++.+|+.+.|++. ......+.|++.|.++..... +.+.+. +...+...+...++|+++.||.
T Consensus 134 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~I~l~H~~v~g~~~--~~~se~~~~~~v~~~~~~~~~dyvalGH~ 211 (379)
T 3tho_B 134 PDESEALRKNEGDFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAG--YAGIEQGREIIINRALIPSVVDYAALGHI 211 (379)
T ss_dssp CCCC----CHHHHHHHHHHHHHHHHHHHHHTCSSEEEEEEESCBSCCCC---------CSCCBCGGGSCTTSSEEEEESC
T ss_pred CCHHHHhhhhccchHHHHHHHHHHHHHHhcCCCCCeEEEEeccccCCcc--CCCCccccccccCHHHcCcCCCEEEcccc
Confidence 2111 12457789999998731 112345689999998754321 000000 0011222233468999999999
Q ss_pred cCceeE
Q 008029 412 HAYERM 417 (580)
Q Consensus 412 H~yeR~ 417 (580)
|..+..
T Consensus 212 H~~q~~ 217 (379)
T 3tho_B 212 HSFREI 217 (379)
T ss_dssp SSCEEE
T ss_pred cCCeEe
Confidence 998654
|
| >3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=9.8e-11 Score=119.49 Aligned_cols=199 Identities=15% Similarity=0.051 Sum_probs=108.1
Q ss_pred CeEEEEEcccCCCCChHHHHHHHHHCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHHHhhhh
Q 008029 199 PHRIAVIGDLGLTSNSSTTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRFMEP 278 (580)
Q Consensus 199 ~~rfav~gD~g~~~~~~~~l~~i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~~~l~~ 278 (580)
.+||+++||+|...... .-.++|+||++||+++.. . ......+.++++.
T Consensus 59 ~mri~~iSD~H~~~~~l------~i~~~D~vi~aGDl~~~g-------~------------------~~e~~~~~~~L~~ 107 (296)
T 3rl5_A 59 HTRFVCISDTRSRTDGI------QMPYGDILLHTGDFTELG-------L------------------PSEVKKFNDWLGN 107 (296)
T ss_dssp EEEEEEEBCCTTCCTTC------CCCSCSEEEECSCCSSSC-------C------------------HHHHHHHHHHHHT
T ss_pred CeEEEEEeeCCCCcchh------ccCCCCEEEECCcccCCC-------C------------------HHHHHHHHHHHHh
Confidence 58999999999875321 124799999999999531 1 1223444555555
Q ss_pred hccCCCeEEecCCCCCCCCcccccHHHHHh----hc----CCCCC---CCCC-CCcce----EEEEeCcEEEEEEcCccc
Q 008029 279 LTSRVPMMVIEGNHEIEPQVAGITFKSYLT----RF----AVPSE---ESGS-NSNFY----YSFNAGGVHFIMLGAYVD 342 (580)
Q Consensus 279 l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~----~f----~~P~~---~~~~-~~~~y----Ysfd~G~v~fI~Ldt~~~ 342 (580)
+. ..++++++||||...+.. .+..... ++ ..+.. .... ..+.. -+..+++++|+...-...
T Consensus 108 l~-~~~v~~V~GNHD~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~~~~i~Gl~i~Gsp~tP~ 184 (296)
T 3rl5_A 108 LP-YEYKIVIAGNHELTFDKE--FMADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQDSEVTVKGFRIYGAPWTPW 184 (296)
T ss_dssp SC-CSEEEECCCTTCGGGCHH--HHHHHTTSCGGGSHHHHTCCHHHHTTTGGGCTTSEECSSEEEEETTEEEEEECCBCC
T ss_pred CC-CCeEEEEcCCcccccchh--hhhhhhcccccccccccccccchhhhHhhhcCCeEEecCCcEEECCEEEEEecCCCC
Confidence 42 246899999999864311 0110000 00 00000 0000 00111 245678899988543221
Q ss_pred CC---CcHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCc-chhHHHHHHHHHHH-HhcCCcEEEEccccCceeE
Q 008029 343 YN---STGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHY-QEFECMRQEMEALL-YQYGVDIVFSGHVHAYERM 417 (580)
Q Consensus 343 ~~---~~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~-~~~~~~r~~l~~Ll-~ky~VdlvlsGH~H~yeR~ 417 (580)
+. ...++.+++.+.+.+.. ....|+++|.|++....... .....-.+.|.+.+ .+++++++++||+|.....
T Consensus 185 ~~~~~f~~~~~~~~~~~~~~ip---~~~dILvTH~PP~g~~D~~~~~~~~~G~~~L~~~i~~~~~p~l~v~GH~H~~~~~ 261 (296)
T 3rl5_A 185 FNGWGFNLPRGQSLLDKWNLIP---EGTDILMTHGPPLGFRDWVPKELQRVGCVELLNTVQRRVRPKLHVFGGIHEGYGT 261 (296)
T ss_dssp --CCTTBCCTTHHHHHHHTTSC---TTCSEEEESSCBTTSSCEEGGGTEECSBHHHHHHHHHTTCCSEEEECSCGGGCEE
T ss_pred CCCcCCCcchHHHHHHHHhhCC---CCCeEEEECCCccccccccccccCcCChHHHHHHHHHhcCCCEEEECCccCCCce
Confidence 21 12222234444444432 23468999999987643110 00000013455555 6899999999999975332
Q ss_pred eeccccccCCCCcEEEEeCCCCcc
Q 008029 418 NRVYNYTLDACGPVYITVGDGGNI 441 (580)
Q Consensus 418 ~pv~n~~~~~~G~vyIv~G~gG~~ 441 (580)
. ..+++++|..|+.|..
T Consensus 262 ~-------~~g~t~vvNpGs~~~~ 278 (296)
T 3rl5_A 262 M-------TDGYTTYINASTCTVS 278 (296)
T ss_dssp E-------ECSSCEEEECBCSCTT
T ss_pred E-------EECCEEEEECCcCCcC
Confidence 2 1357888988887764
|
| >3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=9.4e-11 Score=118.50 Aligned_cols=185 Identities=15% Similarity=0.120 Sum_probs=102.4
Q ss_pred CeEEEEEcccCCCCCh-HHHHHHHHHCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHHHhhh
Q 008029 199 PHRIAVIGDLGLTSNS-STTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRFME 277 (580)
Q Consensus 199 ~~rfav~gD~g~~~~~-~~~l~~i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~~~l~ 277 (580)
+.||+++||+|..... .++++.+.+.++|.|+++||++... .. ..+..+.++
T Consensus 11 ~~~i~~iSDiHg~~~~l~~vl~~~~~~~~D~ii~~GDlv~~g-------~~--------------------~~~~~~~l~ 63 (270)
T 3qfm_A 11 MTKIALLSDIHGNTTALEAVLADARQLGVDEYWLLGDILMPG-------TG--------------------RRRILDLLD 63 (270)
T ss_dssp CEEEEEECCCTTCHHHHHHHHHHHHHTTCCEEEECSCCSSSS-------SC--------------------SHHHHHHHH
T ss_pred ccEEEEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCC-------CC--------------------HHHHHHHHH
Confidence 6899999999975322 3456666667899999999999531 10 012233343
Q ss_pred hhccCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCCCCCCCcceEEEEeCcEEEEEEcCcccCCCcHHHHHHHHHHH
Q 008029 278 PLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYVDYNSTGAQYAWLKEDL 357 (580)
Q Consensus 278 ~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsfd~G~v~fI~Ldt~~~~~~~~~Q~~WLe~~L 357 (580)
.+ .|++++.||||.... ......+.++.. ...+.+ . ...+.......++++||++..
T Consensus 64 ~~---~~~~~v~GNhD~~~~------~~~~~~~~~~~~-----~~~~~~----~-----~~~~~~~~L~~~~~~~L~~LP 120 (270)
T 3qfm_A 64 QL---PITARVLGNWEDSLW------HGVRKELDSTRP-----SQRYLL----R-----QCQYVLEEISLEEIEVLHNQP 120 (270)
T ss_dssp TS---CEEEECCCHHHHHHH------HHHTTCSCTTSH-----HHHHHH----H-----HHHHHHTTSCHHHHHHHHSCC
T ss_pred cc---CCEEEEcCChHHHHH------HhhccccCCCcH-----HHHHHH----H-----HHHHHHHHcCHHHHHHHHhCC
Confidence 33 378999999996310 000000100000 000000 0 000112234688899988643
Q ss_pred HhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEEccccCceeEeeccccccCCCCcEEEEeCC
Q 008029 358 HKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDACGPVYITVGD 437 (580)
Q Consensus 358 ~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyIv~G~ 437 (580)
...........|++.|..+...... +-....-.+.+..++.+.++|++|+||+|...... ..+|..+|..|+
T Consensus 121 ~~~~~~~~g~~i~lvHg~p~~~~~~-~~~~~~~~~~l~~~~~~~~~d~~i~GHtH~~~~~~-------~~~~~~~iNpGS 192 (270)
T 3qfm_A 121 LQIHRQFGDLTVGISHHLPDKNWGR-ELIHTGKQEEFDRLVTHPPCDIAVYGHIHQQLLRY-------GTGGQLIVNPGS 192 (270)
T ss_dssp SEEEEEETTEEEEEESSBTTBSSSS-TTSTTCCHHHHHHTTTTTTCSEEECCSSCSEEEEE-------CTTSCEEEEECC
T ss_pred CceEEEECCcEEEEEECCCCCCCCc-eecCCCcHHHHHHHhcccCCCEEEECCcCchHhee-------ccCCEEEEECCC
Confidence 3321111234677778654432111 00000113466777778899999999999643321 136889999999
Q ss_pred CCcc
Q 008029 438 GGNI 441 (580)
Q Consensus 438 gG~~ 441 (580)
.|..
T Consensus 193 vg~p 196 (270)
T 3qfm_A 193 IGQP 196 (270)
T ss_dssp SSSC
T ss_pred ccCC
Confidence 8874
|
| >1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8 | Back alignment and structure |
|---|
Probab=99.00 E-value=3.2e-09 Score=101.61 Aligned_cols=47 Identities=17% Similarity=0.269 Sum_probs=35.6
Q ss_pred eEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEEccccCcee
Q 008029 367 WLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYER 416 (580)
Q Consensus 367 wvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR 416 (580)
+.|++.|.|++......+. ...+.+.+++.+++++++++||+|....
T Consensus 107 ~~i~~~H~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~vi~GHtH~~~~ 153 (195)
T 1xm7_A 107 KRILLSHYPAKDPITERYP---DRQEMVREIYFKENCDLLIHGHVHWNRE 153 (195)
T ss_dssp EEEEEESSCSSCSSCCSCH---HHHHHHHHHHHHTTCSEEEECCCCCCSC
T ss_pred cEEEEEccCCcCCCccccc---chHHHHHHHHHHcCCcEEEECCcCCCCc
Confidence 5789999988765433322 2356888899999999999999997654
|
| >1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A | Back alignment and structure |
|---|
Probab=98.98 E-value=2.9e-09 Score=101.92 Aligned_cols=140 Identities=13% Similarity=0.110 Sum_probs=84.7
Q ss_pred eEEEEEcccCCCCC-hHHHHHHHHHCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHHHhhhh
Q 008029 200 HRIAVIGDLGLTSN-SSTTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRFMEP 278 (580)
Q Consensus 200 ~rfav~gD~g~~~~-~~~~l~~i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~~~l~~ 278 (580)
+||+++||+|.... ..+.++.+.+.++|+|+++||++.. ...+.++.
T Consensus 26 m~i~~iSD~Hg~~~~l~~~l~~~~~~~~D~ii~~GDl~~~--------------------------------~~~~~l~~ 73 (190)
T 1s3l_A 26 MKIGIMSDTHDHLPNIRKAIEIFNDENVETVIHCGDFVSL--------------------------------FVIKEFEN 73 (190)
T ss_dssp CEEEEECCCTTCHHHHHHHHHHHHHSCCSEEEECSCCCST--------------------------------HHHHHGGG
T ss_pred eEEEEEeeCCCCHHHHHHHHHHHhhcCCCEEEECCCCCCH--------------------------------HHHHHHHh
Confidence 89999999995422 2344555566799999999999731 01233333
Q ss_pred hccCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCCCCCCCcceEEEEeCcEEEEEEcCcccCCCcHHHHHHHHHHHH
Q 008029 279 LTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYVDYNSTGAQYAWLKEDLH 358 (580)
Q Consensus 279 l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsfd~G~v~fI~Ldt~~~~~~~~~Q~~WLe~~L~ 358 (580)
+ ..|+++++||||.... .+...+ .|.. .. .+ . ... .
T Consensus 74 l--~~~~~~V~GNhD~~~~-------~~~~~~-~~~~----~~-~l----------~--~~~-----------------~ 109 (190)
T 1s3l_A 74 L--NANIIATYGNNDGERC-------KLKEWL-KDIN----EE-NI----------I--DDF-----------------I 109 (190)
T ss_dssp C--SSEEEEECCTTCCCHH-------HHHHHH-HHHC----TT-CE----------E--ESE-----------------E
T ss_pred c--CCCEEEEeCCCcchHH-------HHHHHh-cccC----hh-hh----------c--ccc-----------------e
Confidence 3 5799999999997421 111111 0100 00 00 0 000 0
Q ss_pred hccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhc-CCcEEEEccccCceeEeeccccccCCCCcEEEEeCC
Q 008029 359 KLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQY-GVDIVFSGHVHAYERMNRVYNYTLDACGPVYITVGD 437 (580)
Q Consensus 359 ~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky-~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyIv~G~ 437 (580)
... ...+.|++.|.|++. +.+.+.+. ++|++++||+|..+... .+++.+|..|+
T Consensus 110 ~~~--~~~~~ill~Hg~~~~---------------l~~~~~~~~~~d~vl~GHtH~~~~~~--------~~~~~~iNpGs 164 (190)
T 1s3l_A 110 SVE--IDDLKFFITHGHHQS---------------VLEMAIKSGLYDVVIYGHTHERVFEE--------VDDVLVINPGE 164 (190)
T ss_dssp EEE--ETTEEEEEEESCCHH---------------HHHHHHHHSCCSEEEEECSSCCEEEE--------ETTEEEEECCC
T ss_pred EEe--eCCcEEEEECCChHH---------------HHHHHHhcCCCCEEEECCCCCcceEE--------ECCEEEEECCc
Confidence 011 123578999987543 23445555 99999999999876542 25788898998
Q ss_pred CCc
Q 008029 438 GGN 440 (580)
Q Consensus 438 gG~ 440 (580)
.|.
T Consensus 165 ~~~ 167 (190)
T 1s3l_A 165 CCG 167 (190)
T ss_dssp SSC
T ss_pred ccc
Confidence 775
|
| >2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.95 E-value=1.8e-08 Score=95.39 Aligned_cols=62 Identities=13% Similarity=0.161 Sum_probs=42.6
Q ss_pred CeEEEEEcccCCCCC---hHHHHHHHHHCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHHHh
Q 008029 199 PHRIAVIGDLGLTSN---SSTTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRF 275 (580)
Q Consensus 199 ~~rfav~gD~g~~~~---~~~~l~~i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~~~ 275 (580)
-+||+++||+|...+ ..+.++++. .++|+|+++||+++. ...+.
T Consensus 22 mmri~~iSD~Hg~~~~~~l~~~l~~~~-~~~D~ii~~GD~~~~--------------------------------~~~~~ 68 (178)
T 2kkn_A 22 VKRFLLISDSHVPVRMASLPDEILNSL-KEYDGVIGLGDYVDL--------------------------------DTVIL 68 (178)
T ss_dssp CEEEEEECCCCBTTTTCCCCHHHHHGG-GGCSEEEESSCBSCH--------------------------------HHHHH
T ss_pred ceEEEEEecccCCCCHHHHHHHHHHHh-cCCCEEEECCCCCCH--------------------------------HHHHH
Confidence 379999999995222 234455544 689999999999841 11223
Q ss_pred hhhhccCCCeEEecCCCCCC
Q 008029 276 MEPLTSRVPMMVIEGNHEIE 295 (580)
Q Consensus 276 l~~l~~~vP~~~v~GNHD~~ 295 (580)
++.+ ..|+++++||||..
T Consensus 69 l~~~--~~~v~~V~GNhD~~ 86 (178)
T 2kkn_A 69 LEKF--SKEFYGVHGNMDYP 86 (178)
T ss_dssp HHHH--TSSEEECCCSSSCG
T ss_pred HHhc--CCCEEEEECCCCcH
Confidence 3333 36999999999963
|
| >3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0 | Back alignment and structure |
|---|
Probab=98.92 E-value=2.3e-09 Score=106.50 Aligned_cols=178 Identities=15% Similarity=0.126 Sum_probs=94.8
Q ss_pred CeEEEEEcccCCCCCh-HHHHHHHHHCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHHHhhh
Q 008029 199 PHRIAVIGDLGLTSNS-STTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRFME 277 (580)
Q Consensus 199 ~~rfav~gD~g~~~~~-~~~l~~i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~~~l~ 277 (580)
.+||+++||+|..... .+.++.+. ++|.++++||++... . .-....+.+.
T Consensus 3 ~mri~~isDiHg~~~~l~~~l~~~~--~~d~ii~~GDl~~~g-------~--------------------~~~~~~~~l~ 53 (246)
T 3rqz_A 3 AMRILIISDVHANLVALEAVLSDAG--RVDDIWSLGDIVGYG-------P--------------------RPRECVELVR 53 (246)
T ss_dssp CCCEEEECCCTTCHHHHHHHHHHHC--SCSEEEECSCCSSSS-------S--------------------CHHHHHHHHH
T ss_pred CcEEEEEeecCCCHHHHHHHHHhcc--CCCEEEECCCcCCCC-------C--------------------CHHHHHHHHH
Confidence 5899999999964322 22333332 899999999999431 1 0012233333
Q ss_pred hhccCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCCCCCCCcceEEEEeCcEEEEEEcCcccCCCcHHHHHHHHHHH
Q 008029 278 PLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYVDYNSTGAQYAWLKEDL 357 (580)
Q Consensus 278 ~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsfd~G~v~fI~Ldt~~~~~~~~~Q~~WLe~~L 357 (580)
.+ .+++.+.||||.... ..+.... +...... .+ .+.......++++||++..
T Consensus 54 ~~---~~~~~v~GNhD~~~~----------~~~~~~~------------~~~~~~~--~~-~~~~~~l~~~~~~~L~~lp 105 (246)
T 3rqz_A 54 VL---APNISVIGNHDWACI----------GRLSLDE------------FNPVARF--AS-YWTTMQLQAEHLQYLESLP 105 (246)
T ss_dssp HH---CSSEECCCHHHHHHT----------CCCCCC--------------CGGGGC--HH-HHHHHHCCHHHHHHHHHCC
T ss_pred hc---CCCEEEeCchHHHHh----------ccCCccc------------cCHHHHH--HH-HHHHHHcCHHHHHHHHhCC
Confidence 33 136899999996311 0000000 0000000 00 0001123578899998644
Q ss_pred HhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEEccccCceeEee----------cc--cccc
Q 008029 358 HKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNR----------VY--NYTL 425 (580)
Q Consensus 358 ~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR~~p----------v~--n~~~ 425 (580)
..... . .+++.|.++.......... ...+.++|.+++++++|+||+|....... .. ....
T Consensus 106 ~~~~~-~---~i~~~Hg~p~~~~~~~~~~----~~~~~~~l~~~~~~l~i~GHtH~p~~~~~~~~~~~~~~~~~~~~~~~ 177 (246)
T 3rqz_A 106 NRMID-G---DWTVVHGSPRHPIWEYIYN----ARIAALNFPAFDTPLCFVGHTHVPLYIREDEALSNVAPHHPNDGEVL 177 (246)
T ss_dssp SEEEE-T---TEEEESSCSSSTTTCCCCS----HHHHHHHGGGCCSSEEECCSSSSEEEEEHHHHHTTCCCBCCCTTCEE
T ss_pred cEEEE-C---CEEEEECCcCCccccccCC----hHHHHHHHhccCCCEEEECCcCcccEEEeccccccccccccccccee
Confidence 33221 1 4666777665432111111 24567788999999999999997432220 00 0000
Q ss_pred -CCCCcEEEEeCCCCcc
Q 008029 426 -DACGPVYITVGDGGNI 441 (580)
Q Consensus 426 -~~~G~vyIv~G~gG~~ 441 (580)
-+.|...|..|+-|..
T Consensus 178 ~l~~g~~ivNpGSVG~P 194 (246)
T 3rqz_A 178 DVSSGRYIINPGAVGQP 194 (246)
T ss_dssp ECSSSCEEEEECCSSCC
T ss_pred ecCCCeEEEECCccCCC
Confidence 0236778888998874
|
| >1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A | Back alignment and structure |
|---|
Probab=98.91 E-value=1.1e-08 Score=106.13 Aligned_cols=73 Identities=22% Similarity=0.387 Sum_probs=50.8
Q ss_pred eEEEEEcccCCCCCh--------------HHHHHHHHHCCCCEEEEcccccccccccccCCCCCcccccCCCCCcccccc
Q 008029 200 HRIAVIGDLGLTSNS--------------STTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETY 265 (580)
Q Consensus 200 ~rfav~gD~g~~~~~--------------~~~l~~i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y 265 (580)
|||++++|+|.+... ...++.+.+.+||+||++||+++... +.
T Consensus 1 mkilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vl~~GDl~d~~~-------------------~~---- 57 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSR-------------------PS---- 57 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSS-------------------CC----
T ss_pred CEEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHhcCCCEEEECCCcCCCCC-------------------CC----
Confidence 689999999998531 23344455689999999999985321 11
Q ss_pred HHHHHHHHHhhhhhc-cCCCeEEecCCCCCC
Q 008029 266 QPRWDGWGRFMEPLT-SRVPMMVIEGNHEIE 295 (580)
Q Consensus 266 ~~~wd~~~~~l~~l~-~~vP~~~v~GNHD~~ 295 (580)
...+..+.+.++.+. ..+|+++++||||..
T Consensus 58 ~~~~~~~~~~l~~l~~~~~~v~~v~GNHD~~ 88 (333)
T 1ii7_A 58 PGTLKKAIALLQIPKEHSIPVFAIEGNHDRT 88 (333)
T ss_dssp HHHHHHHHHHHHHHHTTTCCEEEECCTTTCC
T ss_pred HHHHHHHHHHHHHHHHCCCcEEEeCCcCCCc
Confidence 112344555666654 368999999999985
|
| >3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.87 E-value=9.2e-08 Score=102.43 Aligned_cols=41 Identities=24% Similarity=0.273 Sum_probs=32.0
Q ss_pred CCeEEEEEcccCCCCCh-------------HHHHHHHHHCCCCEEEEccccccc
Q 008029 198 YPHRIAVIGDLGLTSNS-------------STTVDHLIQNDPSLILMVGDLTYA 238 (580)
Q Consensus 198 ~~~rfav~gD~g~~~~~-------------~~~l~~i~~~~pDfvl~~GDl~Y~ 238 (580)
.++||++++|+|.+... ..+++.+.+.+||+||++||+++.
T Consensus 31 ~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~~~~~~D~VliaGDlfd~ 84 (431)
T 3t1i_A 31 NTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHE 84 (431)
T ss_dssp GEEEEEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSS
T ss_pred CCEEEEEEeccCCCCcccccchhhhHHHHHHHHHHHHhhcCCCEEEEcCccccC
Confidence 47999999999987431 234555567899999999999854
|
| >4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B* | Back alignment and structure |
|---|
Probab=98.82 E-value=1.3e-07 Score=100.97 Aligned_cols=41 Identities=22% Similarity=0.263 Sum_probs=32.2
Q ss_pred CCeEEEEEcccCCCCC---------h----HHHHHHHHHCCCCEEEEccccccc
Q 008029 198 YPHRIAVIGDLGLTSN---------S----STTVDHLIQNDPSLILMVGDLTYA 238 (580)
Q Consensus 198 ~~~rfav~gD~g~~~~---------~----~~~l~~i~~~~pDfvl~~GDl~Y~ 238 (580)
..+||++++|+|.+.. . .++++.+.+.+||+||++||+++.
T Consensus 12 ~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~ 65 (417)
T 4fbw_A 12 NTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHD 65 (417)
T ss_dssp TCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSS
T ss_pred CCeEEEEEEcCCCCCcccccccchhHHHHHHHHHHHHHhcCCCEEEEcCccccC
Confidence 4799999999999743 1 234555567899999999999854
|
| >4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A* | Back alignment and structure |
|---|
Probab=98.71 E-value=2.4e-07 Score=99.67 Aligned_cols=41 Identities=20% Similarity=0.246 Sum_probs=32.4
Q ss_pred CCeEEEEEcccCCCCCh-------------HHHHHHHHHCCCCEEEEccccccc
Q 008029 198 YPHRIAVIGDLGLTSNS-------------STTVDHLIQNDPSLILMVGDLTYA 238 (580)
Q Consensus 198 ~~~rfav~gD~g~~~~~-------------~~~l~~i~~~~pDfvl~~GDl~Y~ 238 (580)
..+||++++|+|.+... ..+++.+.+.+||+||++||+++.
T Consensus 75 ~~mrilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~ 128 (472)
T 4fbk_A 75 NTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHD 128 (472)
T ss_dssp TCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCSBSS
T ss_pred CCeEEEEEecccCCCcccCcccchhHHHHHHHHHHHHHhcCCCEEEEcCccccC
Confidence 37999999999997431 244556667899999999999864
|
| >2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=98.51 E-value=4.7e-07 Score=100.42 Aligned_cols=174 Identities=18% Similarity=0.128 Sum_probs=96.2
Q ss_pred CCeEEEEEcccCCCCC------------------hHHHHHHHHHCCCC-EEEEcccccccccccccCCCCCcccccCCCC
Q 008029 198 YPHRIAVIGDLGLTSN------------------SSTTVDHLIQNDPS-LILMVGDLTYANQYLTTGGKAASCYSCAFPD 258 (580)
Q Consensus 198 ~~~rfav~gD~g~~~~------------------~~~~l~~i~~~~pD-fvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~ 258 (580)
..++|++++|+|.... ....++++.+.+|| +++.+||++.....
T Consensus 28 ~~l~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~~~~~~l~l~~GD~~~gs~~----------------- 90 (552)
T 2z1a_A 28 FTLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLY----------------- 90 (552)
T ss_dssp CEEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHH-----------------
T ss_pred eeEEEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCcHH-----------------
Confidence 4699999999996411 13445666667788 88999999853211
Q ss_pred CccccccHHHHHHHHHhhhhhccCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCCC-----CC-----CCcceEEEE
Q 008029 259 APIRETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEES-----GS-----NSNFYYSFN 328 (580)
Q Consensus 259 ~p~~e~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~-----~~-----~~~~yYsfd 328 (580)
.. + .......+.|+.+ . +-++++||||+... ...+..+.....+|.-.. +. ....|..++
T Consensus 91 ---~~-~-~~~~~~~~~ln~l--g-~d~~~lGNHEfd~g--~~~l~~~l~~~~~~~L~aNv~~~~~~~~~~~~~~~~i~~ 160 (552)
T 2z1a_A 91 ---FN-Q-YRGLADRYFMHRL--R-YRAMALGNHEFDLG--PGPLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVV 160 (552)
T ss_dssp ---HH-H-HTTHHHHHHHHHT--T-CCEEECCGGGGTTC--HHHHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEE
T ss_pred ---HH-H-hCCcHHHHHHHhc--C-CCccccccccccCC--HHHHHHHHhhCCCCEEEEEEecCCCcccccccCCeEEEE
Confidence 00 0 1122334445544 2 33678999998632 233344444433332110 00 123566788
Q ss_pred eCc--EEEEEEcCccc-----------CCCcHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHH
Q 008029 329 AGG--VHFIMLGAYVD-----------YNSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEME 395 (580)
Q Consensus 329 ~G~--v~fI~Ldt~~~-----------~~~~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~ 395 (580)
.++ +.|+.+.+... +....++.+.+.+.|++ .+...+|++.|.|.... .
T Consensus 161 ~~G~kIgiiG~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~l~~---~~~d~iIvL~H~g~~~d---------------~ 222 (552)
T 2z1a_A 161 VGGERVGIIGLTTPDTREISNPGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGYGED---------------L 222 (552)
T ss_dssp ETTEEEEEEEEECTTHHHHSCCCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHHHH---------------H
T ss_pred ECCEEEEEEEecccchhhccCCCCCcEECCHHHHHHHHHHHHHh---cCCCEEEEEeCCCcchH---------------H
Confidence 886 45555554210 01112334444444543 34567999999984220 1
Q ss_pred HHHHh-cCCcEEEEccccCcee
Q 008029 396 ALLYQ-YGVDIVFSGHVHAYER 416 (580)
Q Consensus 396 ~Ll~k-y~VdlvlsGH~H~yeR 416 (580)
.+..+ .+||++|+||+|....
T Consensus 223 ~la~~~~gvDlIlgGHtH~~~~ 244 (552)
T 2z1a_A 223 KLARRLVGVQVIVGGHSHTLLG 244 (552)
T ss_dssp HHHTTCSSCCEEEECSSCCCBS
T ss_pred HHHHhCCCccEEEeCCcCcccc
Confidence 22333 5899999999998543
|
| >1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=98.46 E-value=5.2e-07 Score=87.32 Aligned_cols=74 Identities=11% Similarity=0.209 Sum_probs=46.8
Q ss_pred eEEEEEcccCCCCCh-HHHHHHHHHCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHHHhhhh
Q 008029 200 HRIAVIGDLGLTSNS-STTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRFMEP 278 (580)
Q Consensus 200 ~rfav~gD~g~~~~~-~~~l~~i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~~~l~~ 278 (580)
+||+++||+|..... .+.++.+.+.++|+++++||+++.... . ...+.|+ -....+.++.
T Consensus 26 mki~~iSD~H~~~~~l~~~l~~~~~~~~d~vi~~GDl~~~g~~--~---------------~~~~~~~--~~~~~~~l~~ 86 (208)
T 1su1_A 26 MKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNHGPR--N---------------ALPEGYA--PAKVVERLNE 86 (208)
T ss_dssp CEEEEECCCTTBHHHHHHHHHHHHHHTCSEEEECSCCSCCCTT--S---------------CCCTTBC--HHHHHHHHHT
T ss_pred EEEEEEEcCCCCHHHHHHHHHHHHhcCCCEEEECCCccccCcc--c---------------ccccccC--HHHHHHHHHh
Confidence 799999999975322 344555555789999999999953110 0 0111111 1233444444
Q ss_pred hccCCCeEEecCCCCC
Q 008029 279 LTSRVPMMVIEGNHEI 294 (580)
Q Consensus 279 l~~~vP~~~v~GNHD~ 294 (580)
+ ..|+++++||||.
T Consensus 87 ~--~~~v~~V~GNHD~ 100 (208)
T 1su1_A 87 V--AHKVIAVRGNCDS 100 (208)
T ss_dssp T--GGGEEECCCTTCC
T ss_pred c--CCceEEEECCCch
Confidence 4 3689999999997
|
| >1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A | Back alignment and structure |
|---|
Probab=98.43 E-value=6.2e-07 Score=98.59 Aligned_cols=185 Identities=16% Similarity=0.083 Sum_probs=95.1
Q ss_pred CCeEEEEEcccCCCCC-----------hHHHHHHHHHC----CC-CEEEEcccccccccccccCCCCCcccccCCCCCcc
Q 008029 198 YPHRIAVIGDLGLTSN-----------SSTTVDHLIQN----DP-SLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPI 261 (580)
Q Consensus 198 ~~~rfav~gD~g~~~~-----------~~~~l~~i~~~----~p-Dfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~ 261 (580)
..++|++++|+|.... ....++++.+. +| ++++.+||++.....
T Consensus 7 ~~l~Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~~~-------------------- 66 (516)
T 1hp1_A 7 YKITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPE-------------------- 66 (516)
T ss_dssp EEEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSCHH--------------------
T ss_pred eEEEEEEecccccCccCCCCCCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCcch--------------------
Confidence 4689999999998532 12345555432 46 799999999742110
Q ss_pred ccccHHHHHHHHHhhhhhccCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCC-------CC-CCCcceEEEEeCc--
Q 008029 262 RETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEE-------SG-SNSNFYYSFNAGG-- 331 (580)
Q Consensus 262 ~e~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~-------~~-~~~~~yYsfd~G~-- 331 (580)
.+.+ ......+.|+.+ . +-++++||||+... ...+..+.....+|.-. .+ .....|.-++.++
T Consensus 67 ~~~~--~~~~~~~~ln~l--g-~d~~~~GNHEfd~g--~~~l~~~~~~~~~~~l~aNv~~~~~g~~~~~~~~i~~~~G~k 139 (516)
T 1hp1_A 67 SDLQ--DAEPDFRGMNLV--G-YDAMAIGNHEFDNP--LTVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLK 139 (516)
T ss_dssp HHTT--TTHHHHHHHHHH--T-CCEEECCGGGGSSC--HHHHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEE
T ss_pred hhhc--CCcHHHHHHhcc--C-CCEEeeccccccCC--HHHHHHHHhhCCCCEEEeEEEECCCCCcccCCeEEEEECCEE
Confidence 0000 112334455554 2 34678999998532 12233333333333211 01 0123466678886
Q ss_pred EEEEEEcCccc--CC-----------CcHHH-HHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcc-hhHHHHHHHHH
Q 008029 332 VHFIMLGAYVD--YN-----------STGAQ-YAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQ-EFECMRQEMEA 396 (580)
Q Consensus 332 v~fI~Ldt~~~--~~-----------~~~~Q-~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~-~~~~~r~~l~~ 396 (580)
+.|+.+.+... +. ...+. .+|++ .|++. .+...+|++.|.|.......... .. ...+..
T Consensus 140 IgiiG~~~~~~~~~~~p~~~~~~~~~d~~~~~~~~v~-~l~~~--~~~d~iI~l~H~g~~~~~~~~~~~~~---~~~la~ 213 (516)
T 1hp1_A 140 IAVIGLTTDDTAKIGNPEYFTDIEFRKPADEAKLVIQ-ELQQT--EKPDIIIAATHMGHYDNGEHGSNAPG---DVEMAR 213 (516)
T ss_dssp EEEEEEECTTTTTSSSCCSCTTEEECCHHHHHHHHHH-HHHHH--TCCSEEEEEEESCCCGGGCCTTSCCC---HHHHHH
T ss_pred EEEEEecccCcccccCcCccCCcEEeCHHHHHHHHHH-HHHhc--CCCCEEEEEecCCccCCCcccccCch---HHHHHH
Confidence 45566654321 10 11122 23333 24321 24568999999997543211000 00 122333
Q ss_pred HHHhcCCcEEEEccccCce
Q 008029 397 LLYQYGVDIVFSGHVHAYE 415 (580)
Q Consensus 397 Ll~ky~VdlvlsGH~H~ye 415 (580)
.+...+||++|+||.|...
T Consensus 214 ~~~~~~iDlilgGHtH~~~ 232 (516)
T 1hp1_A 214 ALPAGSLAMIVGGHSQDPV 232 (516)
T ss_dssp HSCTTSSSEEECCSSCCBC
T ss_pred hCCCCceeEEECCCCCccc
Confidence 3334459999999999753
|
| >3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A* | Back alignment and structure |
|---|
Probab=98.35 E-value=4.7e-06 Score=92.88 Aligned_cols=176 Identities=16% Similarity=0.136 Sum_probs=96.4
Q ss_pred CCeEEEEEcccCCCCC-------------------h---HHHHHHHHHCCCC-EEEEcccccccccccccCCCCCccccc
Q 008029 198 YPHRIAVIGDLGLTSN-------------------S---STTVDHLIQNDPS-LILMVGDLTYANQYLTTGGKAASCYSC 254 (580)
Q Consensus 198 ~~~rfav~gD~g~~~~-------------------~---~~~l~~i~~~~pD-fvl~~GDl~Y~d~~~~~GG~~~~c~~~ 254 (580)
..++|++++|+|.... . ...++++.+.+++ ++|.+||++....+.
T Consensus 11 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~~~~l~l~~GD~~~gs~~~------------ 78 (579)
T 3ztv_A 11 VELSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKYKNPLVLHAGDAITGTLYF------------ 78 (579)
T ss_dssp EEEEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSCSSHHH------------
T ss_pred eEEEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCceee------------
Confidence 4699999999996421 1 2345555555666 889999999542110
Q ss_pred CCCCCccccccHHHHHHHHHhhhhhccCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCCC------CC----CCcce
Q 008029 255 AFPDAPIRETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEES------GS----NSNFY 324 (580)
Q Consensus 255 ~~~~~p~~e~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~------~~----~~~~y 324 (580)
..+ +.....+.|..+ .. -++++||||+.. +...+..+.....+|.-.. +. .-..|
T Consensus 79 --------~~~--~g~~~~~~ln~l--g~-D~~tlGNHEfd~--G~~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py 143 (579)
T 3ztv_A 79 --------TLF--GGSADAAVMNAG--NF-HYFTLGNHEFDA--GNEGLLKLLEPLKIPVLSANVIPDKSSILYNKWKPY 143 (579)
T ss_dssp --------HTT--TTHHHHHHHHHH--TC-SEEECCSGGGTT--HHHHHHHHHTTCCSCEECSSEEECTTSTTTTSCBSE
T ss_pred --------eec--CCHHHHHHHHhc--Cc-Ceeecccccccc--CHHHHHHHHHhcCCCeeeeeEeccCCcccccccCCe
Confidence 000 112234455544 23 356789999852 2233444554444442110 11 11346
Q ss_pred EEEEeCcE--EEEEEcC-c-----ccCC---CcHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHH
Q 008029 325 YSFNAGGV--HFIMLGA-Y-----VDYN---STGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQE 393 (580)
Q Consensus 325 Ysfd~G~v--~fI~Ldt-~-----~~~~---~~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~ 393 (580)
.-++.+++ -||.+.+ . .... ......+-+++.+++.+..+...+|++.|.+... + .
T Consensus 144 ~i~~~~G~kIgviG~t~~~~~~~~~~p~~~~~f~d~~~~~~~~v~~lk~~g~d~iI~l~H~G~~~---------d---~- 210 (579)
T 3ztv_A 144 DIFTVDGEKIAIIGLDTVNKTVNSSSPGKDVKFYDEIATAQIMANALKQQGINKIILLSHAGSEK---------N---I- 210 (579)
T ss_dssp EEEEETTEEEEEEEEECSHHHHHHSCCCTTEEECCHHHHHHHHHHHHHTTTCCCEEEEEETCHHH---------H---H-
T ss_pred EEEEECCEEEEEEEEEcCCccccccCCCCCceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCchh---------h---H-
Confidence 67788874 5566633 1 0000 0122344455555555434567799999986321 0 1
Q ss_pred HHHHHHh-cCCcEEEEccccCce
Q 008029 394 MEALLYQ-YGVDIVFSGHVHAYE 415 (580)
Q Consensus 394 l~~Ll~k-y~VdlvlsGH~H~ye 415 (580)
.+..+ .+||++|+||+|...
T Consensus 211 --~la~~~~giDlIlgGHtH~~~ 231 (579)
T 3ztv_A 211 --EIAQKVNDIDVIVTGDSHYLY 231 (579)
T ss_dssp --HHHHHCSSCCEEEECSSCCEE
T ss_pred --HHHHhCCCCCEEEeCCCCccc
Confidence 12222 379999999999865
|
| >3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=98.33 E-value=5.3e-06 Score=91.43 Aligned_cols=189 Identities=16% Similarity=0.160 Sum_probs=98.1
Q ss_pred CCeEEEEEcccCCCCC-----------------hHHHHHHHHHCCCC-EEEEcccccccccccccCCCCCcccccCCCCC
Q 008029 198 YPHRIAVIGDLGLTSN-----------------SSTTVDHLIQNDPS-LILMVGDLTYANQYLTTGGKAASCYSCAFPDA 259 (580)
Q Consensus 198 ~~~rfav~gD~g~~~~-----------------~~~~l~~i~~~~pD-fvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~ 259 (580)
..++|++++|+|.... ....++++.+.+++ ++|.+||++....
T Consensus 18 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~gs~------------------- 78 (527)
T 3qfk_A 18 SNIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQGSP------------------- 78 (527)
T ss_dssp CEEEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHTTSSEEEEEECSCCSSSSH-------------------
T ss_pred CcEEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHhcCCCEEEEECCCcCCCcH-------------------
Confidence 3699999999996531 12345666666676 7788999985321
Q ss_pred ccccccHH----HHHHHHHhhhhhccCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCCC-----CC--CCcceEEEE
Q 008029 260 PIRETYQP----RWDGWGRFMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEES-----GS--NSNFYYSFN 328 (580)
Q Consensus 260 p~~e~y~~----~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~-----~~--~~~~yYsfd 328 (580)
... |-. ......+.|+.+ ... ++++||||+... ...+..+.....+|.-.. +. ....|.-++
T Consensus 79 -~~~-~~~~~~~~~~~~~~~ln~l--g~D-~~t~GNHefd~G--~~~l~~~~~~~~~p~l~aNv~~~g~p~~~~py~i~e 151 (527)
T 3qfk_A 79 -FCN-YLIAHSGSSQPLVDFYNRM--AFD-FGTLGNHEFNYG--LPYLKDTLRRLNYPVLCANIYENDSTLTDNGVKYFQ 151 (527)
T ss_dssp -HHH-HHHHTTCSSHHHHHHHHHT--CCC-EECCCGGGGTTC--HHHHHHHHHHCSSCBCCSSEEETTEESSSCSEEEEE
T ss_pred -HHH-HHhhcccCcchHHHHHHhc--CCc-EEeccccccccC--HHHHHHHHHhCCCCEEEeEeeeCCCCccCCCEEEEE
Confidence 100 000 012334445544 333 567999997532 233444444444443211 10 113466778
Q ss_pred eCcEE--EEEEcCcc--cCCC--------cHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCC-CC-----cchhHHH
Q 008029 329 AGGVH--FIMLGAYV--DYNS--------TGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYS-SH-----YQEFECM 390 (580)
Q Consensus 329 ~G~v~--fI~Ldt~~--~~~~--------~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~-~~-----~~~~~~~ 390 (580)
.++++ ||.+.+.. .+.. .....+.+++.+++.+ .+...+|+++|.+...... .. ..+..
T Consensus 152 ~~G~kIgviG~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~v~~l~-~~~D~iIvl~H~G~~~d~~~~~~~~~~~~e~~-- 228 (527)
T 3qfk_A 152 VGDQTVGVIGLTTQFIPHWEQPEHIQSLTFHSAFEILQQYLPEMK-RHADIIVVCYHGGFEKDLESGTPTEVLTGENE-- 228 (527)
T ss_dssp ETTEEEEEEEEECTTGGGTSCHHHHTTEEECCHHHHHHHHHHHHH-HHCSEEEEEEECCCSBCTTTCCBSSCCSSSCC--
T ss_pred ECCEEEEEEEeccCCcccccCccccCCcEEcCHHHHHHHHHHHHH-hCCCEEEEEeCcCcccccccCccccccccchH--
Confidence 88754 55554421 1111 1123444555544443 3466799999987543210 00 01110
Q ss_pred HHHHHHHHHhcCCcEEEEccccCcee
Q 008029 391 RQEMEALLYQYGVDIVFSGHVHAYER 416 (580)
Q Consensus 391 r~~l~~Ll~ky~VdlvlsGH~H~yeR 416 (580)
..++..-+ ..+||++|+||+|...-
T Consensus 229 ~~~la~~~-~~giDlIlgGHtH~~~~ 253 (527)
T 3qfk_A 229 GYAMLEAF-SKDIDIFITGHQHRQIA 253 (527)
T ss_dssp HHHHHHHH-GGGCSEEECCSSCCEEE
T ss_pred HHHHHHhc-CCCCcEEEECCCCcccc
Confidence 11222212 24899999999998543
|
| >4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A* | Back alignment and structure |
|---|
Probab=98.30 E-value=1.5e-06 Score=96.13 Aligned_cols=176 Identities=19% Similarity=0.189 Sum_probs=94.1
Q ss_pred CCeEEEEEcccCCCCC---------------------hHHHHHHHHHCCC-CEEEEcccccccccccccCCCCCcccccC
Q 008029 198 YPHRIAVIGDLGLTSN---------------------SSTTVDHLIQNDP-SLILMVGDLTYANQYLTTGGKAASCYSCA 255 (580)
Q Consensus 198 ~~~rfav~gD~g~~~~---------------------~~~~l~~i~~~~p-Dfvl~~GDl~Y~d~~~~~GG~~~~c~~~~ 255 (580)
..++|++++|+|.... ....++++.+.+| +++|.+||++....+
T Consensus 24 ~~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g~~~-------------- 89 (546)
T 4h2g_A 24 WELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIW-------------- 89 (546)
T ss_dssp EEEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHH--------------
T ss_pred eEEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhCCCEEEEECCccCCCchh--------------
Confidence 4699999999996421 1234556655666 599999999954211
Q ss_pred CCCCccccccHHHHHHHHHhhhhhccCCCeEEecCCCCCCCCcccccHH-HHHhhcCCCCCCCC---C---------CCc
Q 008029 256 FPDAPIRETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIEPQVAGITFK-SYLTRFAVPSEESG---S---------NSN 322 (580)
Q Consensus 256 ~~~~p~~e~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~-~y~~~f~~P~~~~~---~---------~~~ 322 (580)
... .......+.|+.+ ... ++++||||+... ...+. .+.....+|.-... . ...
T Consensus 90 ------~~~--~~g~~~~~~ln~l--g~d-~~~~GNHEfd~g--~~~l~~~~~~~~~~~~l~aNv~~~~~~~p~~~~~~~ 156 (546)
T 4h2g_A 90 ------FTV--YKGAEVAHFMNAL--RYD-AMALGNHEFDNG--VEGLIEPLLKEAKFPILSANIKAKGPLASQISGLYL 156 (546)
T ss_dssp ------HHH--HTTHHHHHHHHHH--TCS-EEECCGGGGTTH--HHHHHTTTTTTCSSCEECSSEEECHHHHHHHBTTBB
T ss_pred ------hhh--hCChHHHHHHHhc--CCc-EEeccCcccccC--HHHHHHHHHhhcCCCEEEEEeecCCCCCccccccCC
Confidence 000 1123334555554 333 577999998422 12222 33333333321110 0 123
Q ss_pred ceEEEEeCcEE--EEEEcCccc--C-CC-----cHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHH
Q 008029 323 FYYSFNAGGVH--FIMLGAYVD--Y-NS-----TGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQ 392 (580)
Q Consensus 323 ~yYsfd~G~v~--fI~Ldt~~~--~-~~-----~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~ 392 (580)
.|.-++.++++ ||.+.+... + .. .....+.+++.+++.+..+...+|++.|.+... . .
T Consensus 157 ~~~i~~~~G~kIgiiG~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~l~~~g~D~iI~l~H~g~~~--------d----~ 224 (546)
T 4h2g_A 157 PYKVLPVGDEVVGIVGYTSKETPFLSNPGTNLVFEDEITALQPEVDKLKTLNVNKIIALGHSGFEM--------D----K 224 (546)
T ss_dssp SEEEEEETTEEEEEEEEECTTHHHHSCCCSSEEECCHHHHHHHHHHHHHHTTCCCEEEEEESCHHH--------H----H
T ss_pred CeEEEEECCEEEEEEEecccccccccCCCCCcEEccHHHHHHHHHHHHHhcCCCEEEEEeccCccc--------h----H
Confidence 56677888755 455543210 0 00 112334455554444334467799999987421 0 1
Q ss_pred HHHHHHHh-cCCcEEEEccccCce
Q 008029 393 EMEALLYQ-YGVDIVFSGHVHAYE 415 (580)
Q Consensus 393 ~l~~Ll~k-y~VdlvlsGH~H~ye 415 (580)
. +..+ .+||++|+||+|...
T Consensus 225 ~---la~~~~giDlIlgGHtH~~~ 245 (546)
T 4h2g_A 225 L---IAQKVRGVDVVVGGHSNTFL 245 (546)
T ss_dssp H---HHHHSTTCCEEECCSSCCCC
T ss_pred H---HHHhCCCCcEEEeCCcCccc
Confidence 1 2222 379999999999753
|
| >2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A | Back alignment and structure |
|---|
Probab=98.25 E-value=8.6e-06 Score=90.40 Aligned_cols=153 Identities=15% Similarity=0.093 Sum_probs=80.7
Q ss_pred HHHHHHHC--C--CC-EEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHHHhhhhhccCCCeEEecCC
Q 008029 217 TVDHLIQN--D--PS-LILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRFMEPLTSRVPMMVIEGN 291 (580)
Q Consensus 217 ~l~~i~~~--~--pD-fvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~~~l~~l~~~vP~~~v~GN 291 (580)
.++++.+. + || ++|.+||++..... .. + .......+.|+.+ ..+++ + ||
T Consensus 110 ~v~~~r~~~~~~gpd~Lll~~GD~~~gs~~--------------------~~-~-~~g~~~~~~ln~l--g~d~~-~-GN 163 (562)
T 2wdc_A 110 LIRDQKARVEAEGGKALVLDGGDTWTNSGL--------------------SL-L-TRGEAVVRWQNLV--GVDHM-V-SH 163 (562)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSCCSSSSHH--------------------HH-H-HTTHHHHHHHHHH--TCCEE-C-CS
T ss_pred HHHHHHhhhhcCCCCEEEEeCCCCCCcchh--------------------hh-h-hCCHHHHHHHHhh--CCcEE-e-cc
Confidence 34555443 4 88 89999999953210 00 0 0123344556655 45665 6 99
Q ss_pred CCCCCCcccccHHHHHhhcCCCCCCC-------C-CCCcceEEEEeCc--EEEEEEcCcc-------------cCCCcHH
Q 008029 292 HEIEPQVAGITFKSYLTRFAVPSEES-------G-SNSNFYYSFNAGG--VHFIMLGAYV-------------DYNSTGA 348 (580)
Q Consensus 292 HD~~~~~~~~~f~~y~~~f~~P~~~~-------~-~~~~~yYsfd~G~--v~fI~Ldt~~-------------~~~~~~~ 348 (580)
||+.. +...+..+...+.+|.-.. + .....|.-++.++ +.+|.+.+.. .+....+
T Consensus 164 HEfd~--G~~~l~~~l~~~~~p~L~aNv~~~~~~~~~~~py~i~e~~G~kIgiiG~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (562)
T 2wdc_A 164 WEWTL--GRERVEELLGLFRGEFLSYNIVDDLFGDPLFPAYRIHRVGPYALAVVGASYPYVKVSHPESFTEGLSFALDER 241 (562)
T ss_dssp GGGGG--CHHHHHHHHHHCCSEECCSSCEETTTCCBSSCSEEEEEETTEEEEEEEECCTTHHHHSCGGGGTTEECCCCHH
T ss_pred hhccc--CHHHHHHHHHhCCCCEEEEEEEecCCCCcccCCeEEEEECCeEEEEEeeccCcccccccccccCCcEEeCHHH
Confidence 99842 2233444544444432111 1 0123466677887 4555554321 0111223
Q ss_pred HHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHh-cCCcEEEEccccCce
Q 008029 349 QYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQ-YGVDIVFSGHVHAYE 415 (580)
Q Consensus 349 Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~k-y~VdlvlsGH~H~ye 415 (580)
..+-+.+.|++ .+...+|++.|.|.... ..+..+ .+||++|+||+|...
T Consensus 242 ~~~~~v~~l~~---~~~d~iIvLsH~g~~~d---------------~~la~~~~giDlIlgGHtH~~~ 291 (562)
T 2wdc_A 242 RLQEAVDKARA---EGANAVVLLSHNGMQLD---------------AALAERIRGIDLILSGHTHDLT 291 (562)
T ss_dssp HHHHHHHHHHH---TTCSEEEEEECSCHHHH---------------HHHHTTSSSCCEEEECSSCCCC
T ss_pred HHHHHHHHHHH---CCCCEEEEEeCCCCcch---------------HHHHhcCCCCcEEEeCCCCCCC
Confidence 33322333433 34667999999984210 123334 489999999999753
|
| >3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A* | Back alignment and structure |
|---|
Probab=98.22 E-value=9e-06 Score=89.18 Aligned_cols=189 Identities=19% Similarity=0.110 Sum_probs=96.7
Q ss_pred CCeEEEEEcccCCCCC----------------h---HHHHHHHHHCCCCEEEE-cccccccccccccCCCCCcccccCCC
Q 008029 198 YPHRIAVIGDLGLTSN----------------S---STTVDHLIQNDPSLILM-VGDLTYANQYLTTGGKAASCYSCAFP 257 (580)
Q Consensus 198 ~~~rfav~gD~g~~~~----------------~---~~~l~~i~~~~pDfvl~-~GDl~Y~d~~~~~GG~~~~c~~~~~~ 257 (580)
..++|++++|+|.... . ...++++.+.+|+.+++ +||++....+
T Consensus 5 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~~~~~llldaGD~~~g~~~---------------- 68 (509)
T 3ive_A 5 KDVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFTGPYI---------------- 68 (509)
T ss_dssp EEEEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHH----------------
T ss_pred eEEEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhcCCCeEEEECCCCCCCchh----------------
Confidence 3589999999995421 1 23456666678887666 9999853211
Q ss_pred CCccccccHHHHHHHHHhhhhhccCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCC-------CCC-C-CcceEEEE
Q 008029 258 DAPIRETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEE-------SGS-N-SNFYYSFN 328 (580)
Q Consensus 258 ~~p~~e~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~-------~~~-~-~~~yYsfd 328 (580)
... .......+.|+.+ -+-++++||||+... ...+..+.....+|.-. .+. . ...|.-++
T Consensus 69 ----~~~--~~g~~~~~~ln~l---g~D~~tlGNHEfd~G--~~~l~~~l~~~~~p~l~aNv~~~~~~~p~~~~py~i~e 137 (509)
T 3ive_A 69 ----SSL--TKGKAIIDIMNTM---PFDAVTIGNHEFDHG--WDNTLLQLSQAKFPIVQGNIFYQNSSKSFWDKPYTIIE 137 (509)
T ss_dssp ----HHT--TTTHHHHHHHTTS---CCSEECCCGGGGTTC--HHHHHHHHTTCSSCBCCCSEEETTSCCBSSSCSEEEEE
T ss_pred ----hhh--cCChHHHHHHHhc---CCcEEeecccccccC--HHHHHHHHhhCCCCEEEEEEEECCCCCccCcCCeEEEE
Confidence 000 0122334444443 244677899998532 23344444444433211 011 0 23466778
Q ss_pred eCcE--EEEEEcCcc-----cC----C--CcHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchh-HHHHHHH
Q 008029 329 AGGV--HFIMLGAYV-----DY----N--STGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEF-ECMRQEM 394 (580)
Q Consensus 329 ~G~v--~fI~Ldt~~-----~~----~--~~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~-~~~r~~l 394 (580)
.+++ -||.+-+.. .. . ......+.+++.+++.+.. ...+|+++|.+............ ......-
T Consensus 138 ~~G~kIgiiG~t~~~~~~~~~~~~~~~g~~~~d~~~~~~~~v~~Lk~~-~D~iIvl~H~G~~~~~~~~~~~~~~~~~~~d 216 (509)
T 3ive_A 138 KDGVKIGVIGLHGVFAFNDTVSAATRVGIEARDEIKWLQRYIDELKGK-VDLTVALIHEGVPARQSSMGGTDVRRALDKD 216 (509)
T ss_dssp ETTEEEEEEEEECHHHHHHHSCGGGCTTEEECCHHHHHHHHHHHHTTT-CSEEEEEEECSSCCCCCCC---CCCCCCHHH
T ss_pred ECCEEEEEEecccCcccccccccccCCCCEEcCHHHHHHHHHHHHHhc-CCEEEEEeccCcCCccccccccccccccchH
Confidence 8875 455553210 00 0 1123345555555555433 67899999987532211100000 0000011
Q ss_pred HHHHHh-cCCcEEEEccccCc
Q 008029 395 EALLYQ-YGVDIVFSGHVHAY 414 (580)
Q Consensus 395 ~~Ll~k-y~VdlvlsGH~H~y 414 (580)
..+.++ .+||++|+||.|..
T Consensus 217 ~~la~~~~giDlIlgGHtH~~ 237 (509)
T 3ive_A 217 IQTASQVKGLDILITGHAHVG 237 (509)
T ss_dssp HHHHHHCSSCCEEEEESSCCC
T ss_pred HHHHhcCCCCcEEEeCCcCcc
Confidence 123333 37999999999963
|
| >3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=98.15 E-value=3.2e-05 Score=85.66 Aligned_cols=194 Identities=16% Similarity=0.161 Sum_probs=97.0
Q ss_pred EEcCCCCCCCCCCeEEEEEcccCCCCC--------------hHHHHHHHH----HCCCC-EEEEcccccccccccccCCC
Q 008029 187 FETLPLPSPTSYPHRIAVIGDLGLTSN--------------SSTTVDHLI----QNDPS-LILMVGDLTYANQYLTTGGK 247 (580)
Q Consensus 187 F~T~p~~~~~~~~~rfav~gD~g~~~~--------------~~~~l~~i~----~~~pD-fvl~~GDl~Y~d~~~~~GG~ 247 (580)
|-++|........++|++++|+|.... ..+.+..+. +.+++ ++|.+||++....+..-
T Consensus 3 ~~s~p~~~~~~~~l~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~Gs~~~~~--- 79 (557)
T 3c9f_A 3 LASFPHRNLTWNDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDI--- 79 (557)
T ss_dssp --CCCBCCCCCCSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHS---
T ss_pred cccCCCCCCCceEEEEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCCccchhh---
Confidence 445565544446799999999998521 122233332 35788 57999999954321100
Q ss_pred CCcccccCCCCCccccccHHHHHHHHHhhhhhccCCCeEEecCCCCCCCCccc-ccHHHHHhhcCCCCCC--------CC
Q 008029 248 AASCYSCAFPDAPIRETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIEPQVAG-ITFKSYLTRFAVPSEE--------SG 318 (580)
Q Consensus 248 ~~~c~~~~~~~~p~~e~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~-~~f~~y~~~f~~P~~~--------~~ 318 (580)
+..+.....+.|+.+ ..- ++++||||+...... ..+........+|.-. .+
T Consensus 80 -----------------~~~~g~~~~~~ln~l--g~D-a~tlGNHEfD~G~~~l~~~~~~l~~a~fp~L~ANv~~~~~~g 139 (557)
T 3c9f_A 80 -----------------TSPNGLKSTPIFIKQ--DYD-LLTIGNHELYLWENSKQEYETVVNHFQDKYVCSNVDIRLDNG 139 (557)
T ss_dssp -----------------SSSTTTTTHHHHTTS--CCS-EECCCGGGSSSHHHHHHHHHHHHHHTTTTBBCSSEEEECTTS
T ss_pred -----------------cccCCHHHHHHHHhc--CCC-EEeecchhcccchHHHHHHHHHHHhCCCCEEEeecccccccC
Confidence 000111123444444 233 567899999643110 1233333333333311 11
Q ss_pred C---CCcceEEEEe--CcE--EEEEEcCccc-------CCCcHH--HHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCC
Q 008029 319 S---NSNFYYSFNA--GGV--HFIMLGAYVD-------YNSTGA--QYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSS 382 (580)
Q Consensus 319 ~---~~~~yYsfd~--G~v--~fI~Ldt~~~-------~~~~~~--Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~ 382 (580)
. ....|.-++. +++ -||.+.+... +....+ +.+|+++.++ .+...+|++.|.+.....
T Consensus 140 ~~~~~~~py~I~e~~~~G~kIgiiGlt~~~~~~~~~~~~~d~~e~i~~~~v~~l~~----~~~D~IIvL~H~G~~~~~-- 213 (557)
T 3c9f_A 140 LFVPLGLKYKYFTTPIRGIRVMAFGFLFDFKRFNSGTRVTPMAETIHEPWFQEALK----HEVDLIIIVGHTPISHNW-- 213 (557)
T ss_dssp CEEESSBSCEEEECTTTCCEEEEEECCCCCCCCCTTEEECCHHHHTTSHHHHHHTT----SCCSEEEEECSSCCCTTT--
T ss_pred CccccCCCeEEEEEccCCEEEEEEEeecCCCCCCCCcEECCHHHHHHHHHHHHHHh----cCCCEEEEecccCccccC--
Confidence 1 1234667787 664 4555543211 011111 1136655442 356789999999863111
Q ss_pred CcchhHHHHHHHHHHHHh--cCCcE-EEEccccCce
Q 008029 383 HYQEFECMRQEMEALLYQ--YGVDI-VFSGHVHAYE 415 (580)
Q Consensus 383 ~~~~~~~~r~~l~~Ll~k--y~Vdl-vlsGH~H~ye 415 (580)
.+. ......|.+ .++|+ +|.||.|...
T Consensus 214 --d~~----~~~~~~lA~~~~giDilIlgGHtH~~~ 243 (557)
T 3c9f_A 214 --GEF----YQVHQYLRQFFPDTIIQYFGGHSHIRD 243 (557)
T ss_dssp --CHH----HHHHHHHHHHCTTSEEEEEECSSCCEE
T ss_pred --ccc----cHHHHHHHHhCCCCCEEEECCCCCCCC
Confidence 111 122222222 48995 9999999873
|
| >1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=98.10 E-value=3.9e-05 Score=77.46 Aligned_cols=190 Identities=17% Similarity=0.191 Sum_probs=101.4
Q ss_pred CeEEEEEcccCCCCChH---HHHHHHHHC-CCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHHH
Q 008029 199 PHRIAVIGDLGLTSNSS---TTVDHLIQN-DPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGR 274 (580)
Q Consensus 199 ~~rfav~gD~g~~~~~~---~~l~~i~~~-~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~~ 274 (580)
.+||+++||.+...... ..+.++.+. ++|+++..||.+.. |.+ +. ....+
T Consensus 4 ~m~ilf~GDv~G~~G~~~l~~~l~~lr~~~~~d~vi~Ngen~~g-------G~g------------~~-------~~~~~ 57 (281)
T 1t71_A 4 SIKFIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTH-------GKG------------LS-------LKHYE 57 (281)
T ss_dssp CCEEEEECEEBHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTT-------TSS------------CC-------HHHHH
T ss_pred eEEEEEECCcCChHHHHHHHHHHHHHHHhcCCCEEEEcCCCCCC-------CCC------------cC-------HHHHH
Confidence 48999999998543222 234555443 68999999998853 121 11 12233
Q ss_pred hhhhhccCCCeEEecCCCCCCCCcccccHHHHHhh--cCCCCCCC-CC----CCcceEEEEeCcE--EEEEEcCcccCC-
Q 008029 275 FMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTR--FAVPSEES-GS----NSNFYYSFNAGGV--HFIMLGAYVDYN- 344 (580)
Q Consensus 275 ~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~--f~~P~~~~-~~----~~~~yYsfd~G~v--~fI~Ldt~~~~~- 344 (580)
.|..+ .+- .++.||||+.... ....|... .-.|.|-+ .. .+..|.-++.+++ -+|.|-+...+.
T Consensus 58 ~ln~~--G~D-a~TlGNHefD~g~---~~~~~l~~~~~v~~aN~p~~~~~~~~g~g~~I~e~~G~kIgVIgl~g~~~f~~ 131 (281)
T 1t71_A 58 FLKEA--GVN-YITMGNHTWFQKL---DLAVVINKKDLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLP 131 (281)
T ss_dssp HHHHH--TCC-EEECCTTTTCCGG---GHHHHTTCTTEECBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCS
T ss_pred HHHhc--CCC-EEEEccCcccCCc---cHHHHhhhcCEEeeccCCcccccccCCCCeEEEEECCEEEEEEEeeccccccC
Confidence 34333 333 3567999997441 22233332 11222211 11 2345777888764 455554443122
Q ss_pred -CcHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEEccccCceeEeecccc
Q 008029 345 -STGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNY 423 (580)
Q Consensus 345 -~~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR~~pv~n~ 423 (580)
....-.+-+++.++ +.+.+.+|+.+|.-. ..+ ...+.. .-.-+||+++.||+|...-. .
T Consensus 132 ~~~~~pf~~a~~~v~---~~~~diIIv~~H~g~-------t~E----k~~la~-~~dg~VD~VvGgHTHv~t~d-----~ 191 (281)
T 1t71_A 132 FKTTNPFKVLKELIL---KRDCDLHIVDFHAET-------TSE----KNAFCM-AFDGYVTTIFGTHTHVPSAD-----L 191 (281)
T ss_dssp SCBCCHHHHHHHHHT---TCCCSEEEEEEECSC-------HHH----HHHHHH-HHTTTSSEEEEESSSSCCTT-----C
T ss_pred ccccCHHHHHHHHHh---hcCCCEEEEEeCCCc-------hHH----HHHHHH-hCCCCeEEEEeCCCCcCCCc-----e
Confidence 22223445555555 346788999999521 011 122322 22346999999999975332 1
Q ss_pred ccCCCCcEEEE-eCCCCc
Q 008029 424 TLDACGPVYIT-VGDGGN 440 (580)
Q Consensus 424 ~~~~~G~vyIv-~G~gG~ 440 (580)
..-++|+.||+ .|..|.
T Consensus 192 ~il~~gt~~i~d~G~~G~ 209 (281)
T 1t71_A 192 RITPKGSAYITDVGMCGP 209 (281)
T ss_dssp EECTTSCEEESCCCEEBC
T ss_pred EEecCCcEEEecCccccC
Confidence 12357888886 244444
|
| >1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=98.07 E-value=4.2e-06 Score=81.34 Aligned_cols=40 Identities=30% Similarity=0.351 Sum_probs=27.3
Q ss_pred CeEEEEEcccCCCCCh-HHHHHHHHH-CCCCEEEEccccccc
Q 008029 199 PHRIAVIGDLGLTSNS-STTVDHLIQ-NDPSLILMVGDLTYA 238 (580)
Q Consensus 199 ~~rfav~gD~g~~~~~-~~~l~~i~~-~~pDfvl~~GDl~Y~ 238 (580)
.+|++++||+|..... .+.++.+.. .++|.++++||+++.
T Consensus 12 ~~~i~visDiHg~~~~l~~~l~~~~~~~~~d~~i~~GD~~~~ 53 (221)
T 1g5b_A 12 YRNIWVVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVDR 53 (221)
T ss_dssp CSCEEEECCCTTCHHHHHHHHHHHTCCTTTCEEEECSCCSSS
T ss_pred CceEEEEEcCCCCHHHHHHHHHHccCCCCCCEEEEeCCccCC
Confidence 4689999999964321 233333332 268999999999953
|
| >1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=97.95 E-value=0.00031 Score=69.84 Aligned_cols=188 Identities=15% Similarity=0.134 Sum_probs=101.0
Q ss_pred eEEEEEcccCCCCCh---HHHHHHHHHCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHHHhh
Q 008029 200 HRIAVIGDLGLTSNS---STTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRFM 276 (580)
Q Consensus 200 ~rfav~gD~g~~~~~---~~~l~~i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~~~l 276 (580)
+||+++||.=..... ...++++.+.. |+++..|+.+.. |.+ +. ....+.|
T Consensus 1 m~ilf~GDv~g~~G~~~~~~~l~~lr~~~-d~vi~nge~~~~-------G~g------------~~-------~~~~~~l 53 (255)
T 1t70_A 1 MRVLFIGDVFGQPGRRVLQNHLPTIRPQF-DFVIVNMENSAG-------GFG------------MH-------RDAARGA 53 (255)
T ss_dssp CEEEEECCBBHHHHHHHHHHHHHHHGGGC-SEEEEECTBTTT-------TSS------------CC-------HHHHHHH
T ss_pred CEEEEEeccCChHHHHHHHHHHHHHHhhC-CEEEECCCCccC-------CcC------------CC-------HHHHHHH
Confidence 589999997422211 23455555556 999998888743 221 11 1123334
Q ss_pred hhhccCCCeEEecCCCCCCCCcccccHHHHHhhcC----CCCCCC--CCCCcceEEEEeCc--EEEEEEcCcccCCCcHH
Q 008029 277 EPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFA----VPSEES--GSNSNFYYSFNAGG--VHFIMLGAYVDYNSTGA 348 (580)
Q Consensus 277 ~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~----~P~~~~--~~~~~~yYsfd~G~--v~fI~Ldt~~~~~~~~~ 348 (580)
..+ .+-. ++.||||+... ....|..... .|.|-+ +..+..|.-++.++ +-+|.|-+.........
T Consensus 54 ~~~--G~Da-~TlGNHefD~~----~l~~~l~~~~~~~~~~aN~~~~~~pg~g~~I~~~~G~kIgVigl~g~~~~~~~~~ 126 (255)
T 1t70_A 54 LEA--GAGC-LTLGNHAWHHK----DIYPMLSEDTYPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDN 126 (255)
T ss_dssp HHH--TCSE-EECCTTTTSST----THHHHHHTTCSCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSC
T ss_pred HhC--CCCE-EEeccccccCc----hHHHHHhhCCCcEEEEeccCCCCCCCCCeEEEEECCEEEEEEEeecCcCcccccC
Confidence 333 3444 45699999742 2334433222 243321 22345677788876 44555544422212233
Q ss_pred HHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEEccccCceeEeeccccccCCC
Q 008029 349 QYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDAC 428 (580)
Q Consensus 349 Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR~~pv~n~~~~~~ 428 (580)
-.+-+++.+++. +.+.+|+.+|.-. ..+ .+.+.. ..+-+||+++.||+|...-.. ..-++
T Consensus 127 p~~~~~~~v~~l---~~d~IIv~~H~e~-------t~E----k~~la~-~~dg~vd~VvGgHTHv~~~d~-----~il~~ 186 (255)
T 1t70_A 127 PFRTMDALLERD---DLGTVFVDFHAEA-------TSE----KEAMGW-HLAGRVAAVIGTHTHVPTADT-----RILKG 186 (255)
T ss_dssp HHHHHHHHTTCS---SCCEEEEEEECSC-------HHH----HHHHHH-HHTTSSSEEEEESSCSCBSCC-----EEETT
T ss_pred HHHHHHHHHHHh---CCCEEEEEeCCCC-------hHH----HHHHHH-hCCCCeEEEEeCCCCcCCCce-----EEcCC
Confidence 344566666655 4678999999521 111 122322 223469999999999743321 11247
Q ss_pred CcEEEE-eCCCCcc
Q 008029 429 GPVYIT-VGDGGNI 441 (580)
Q Consensus 429 G~vyIv-~G~gG~~ 441 (580)
|+.||+ .|..|..
T Consensus 187 gt~~i~d~G~~G~y 200 (255)
T 1t70_A 187 GTAYQTDAGFTGPH 200 (255)
T ss_dssp TEEEESCCCCBEES
T ss_pred CeEEEEcCcccccC
Confidence 888886 3555553
|
| >2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A | Back alignment and structure |
|---|
Probab=97.92 E-value=0.00021 Score=70.82 Aligned_cols=188 Identities=17% Similarity=0.239 Sum_probs=102.2
Q ss_pred eEEEEEcccCCCCCh---HHHHHHHHHCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHHHhh
Q 008029 200 HRIAVIGDLGLTSNS---STTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRFM 276 (580)
Q Consensus 200 ~rfav~gD~g~~~~~---~~~l~~i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~~~l 276 (580)
+||+++||.=..... ...+.++.+.. |+++..|..+.. |++ +. ....+.|
T Consensus 1 m~ilfiGDi~g~~G~~~v~~~l~~lr~~~-d~vi~ngen~~~-------G~g------------~~-------~~~~~~l 53 (252)
T 2z06_A 1 MRVLFIGDVMAEPGLRAVGLHLPDIRDRY-DLVIANGENAAR-------GKG------------LD-------RRSYRLL 53 (252)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHGGGC-SEEEEECTTTTT-------TSS------------CC-------HHHHHHH
T ss_pred CEEEEEEecCCcccHHHHHHHHHHHHhhC-CEEEEeCCCccC-------CCC------------cC-------HHHHHHH
Confidence 589999997433221 33455665566 999887776642 221 11 1223334
Q ss_pred hhhccCCCeEEecCCCCCCCCcccccHHHHHhhc--CCCCCCC-CCCCcceEEEEeCcEEEEEEc--CcccCCCcHHHHH
Q 008029 277 EPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRF--AVPSEES-GSNSNFYYSFNAGGVHFIMLG--AYVDYNSTGAQYA 351 (580)
Q Consensus 277 ~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f--~~P~~~~-~~~~~~yYsfd~G~v~fI~Ld--t~~~~~~~~~Q~~ 351 (580)
..+ .+-.+ +.||||+... ....|.... -.|.|-+ +.....|.-++.++.++-+++ +.........-.+
T Consensus 54 ~~~--G~D~~-T~GNHefD~~----~l~~~l~~~~~vrpaN~~~~~pg~~~~i~~~~G~kIgVi~l~g~~~~~~~~~pf~ 126 (252)
T 2z06_A 54 REA--GVDLV-SLGNHAWDHK----EVYALLESEPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFR 126 (252)
T ss_dssp HHH--TCCEE-ECCTTTTSCT----THHHHHHHSSEECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHH
T ss_pred HhC--CCCEE-EeccEeeECc----hHHHHhccCCceEeecCCCCCCCCCeEEEEECCEEEEEEEcccccCccccCCHHH
Confidence 433 44454 6799999742 233444322 1222221 122456778888876654444 3322112222234
Q ss_pred HHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEEccccCceeEeeccccccCCCCcE
Q 008029 352 WLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDACGPV 431 (580)
Q Consensus 352 WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR~~pv~n~~~~~~G~v 431 (580)
-+++.+++.+ .+.+|+.+|.-. . .+ .+.+. .+.+-+||+|+.||+|.... +..+-++|+.
T Consensus 127 ~~~~~v~~lk---~d~IIv~~H~g~--------t-se--k~~la-~~~dg~Vd~VvGgHTHv~t~-----d~~il~~gt~ 186 (252)
T 2z06_A 127 ALDRLLEEEK---ADYVLVEVHAEA--------T-SE--KMALA-HYLDGRASAVLGTHTHVPTL-----DATRLPKGTL 186 (252)
T ss_dssp HHHHHHHHCC---CSEEEEEEECSC--------H-HH--HHHHH-HHHBTTBSEEEEESSCSCBS-----CCEECTTSCE
T ss_pred HHHHHHHHhC---CCEEEEEeCCCc--------H-HH--HHHHH-HhCCCCeEEEEcCCCCcCCC-----ccEEcCCCcE
Confidence 4666666653 678999999631 0 11 12222 22345799999999997432 2223458899
Q ss_pred EEE-eCCCCcc
Q 008029 432 YIT-VGDGGNI 441 (580)
Q Consensus 432 yIv-~G~gG~~ 441 (580)
||+ .|..|..
T Consensus 187 ~itd~G~~G~y 197 (252)
T 2z06_A 187 YQTDVGMTGTY 197 (252)
T ss_dssp EESCCCCBEES
T ss_pred eecCCcccccC
Confidence 986 3555543
|
| >3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=97.82 E-value=0.00018 Score=74.79 Aligned_cols=187 Identities=19% Similarity=0.153 Sum_probs=92.7
Q ss_pred CCeEEEEEcccCCCCC-----------------hHHHHHHHHHCCCC-EEEEcccccccccccccCCCCCcccccCCCCC
Q 008029 198 YPHRIAVIGDLGLTSN-----------------SSTTVDHLIQNDPS-LILMVGDLTYANQYLTTGGKAASCYSCAFPDA 259 (580)
Q Consensus 198 ~~~rfav~gD~g~~~~-----------------~~~~l~~i~~~~pD-fvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~ 259 (580)
..++|+..+|+|.... ....++++.+..++ ++|.+||++...
T Consensus 10 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~~~llld~GD~~qGs-------------------- 69 (341)
T 3gve_A 10 VHLSILATTDIHANMMDYDYYSDKETADFGLARTAQLIQKHREQNPNTLLVDNGDLIQGN-------------------- 69 (341)
T ss_dssp EEEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSS--------------------
T ss_pred eEEEEEEEeccCCCccCccccCCCccccCCHHHHHHHHHHHHhcCCCEEEEecCccCCCc--------------------
Confidence 4689999999997521 12345556555665 667899999432
Q ss_pred ccccccHHHH----------HHHHHhhhhhccCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCC------CCC-CCc
Q 008029 260 PIRETYQPRW----------DGWGRFMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEE------SGS-NSN 322 (580)
Q Consensus 260 p~~e~y~~~w----------d~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~------~~~-~~~ 322 (580)
|+...+.... ....+.|+.+ ..- ++++||||+... ...+..+.....+|.-. .+. .-.
T Consensus 70 ~~~~~~~~~~~~~g~~~g~~~~~~~~ln~l--g~D-a~tlGNHEfd~G--~~~L~~~~~~~~fp~l~aNv~~~~g~~~~~ 144 (341)
T 3gve_A 70 PLGEYAVKYQKDDIISGTKTHPIISVMNAL--KYD-AGTLGNHEFNYG--LDFLDGTIKGADFPIVNANVKTTSGENRYT 144 (341)
T ss_dssp HHHHHHHHHHHHHHHHTSSCCHHHHHHHHT--TCC-BEECCGGGGTTC--HHHHHHHHHTCSSCEECSSEECTTSCBSSC
T ss_pred HHHHHhhhcccccccccccccHHHHHHHhh--CCC-eeeccchhhccC--HHHHHHHHHhcCCCEEEEeeECCCCCCccC
Confidence 1111011000 0123344443 233 456899998643 23344444444444211 111 112
Q ss_pred ceEEEEe-----C----c--EEEEEEcCccc--CC--------CcHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCC
Q 008029 323 FYYSFNA-----G----G--VHFIMLGAYVD--YN--------STGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYS 381 (580)
Q Consensus 323 ~yYsfd~-----G----~--v~fI~Ldt~~~--~~--------~~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~ 381 (580)
.|.-++. + + +-||.+-+... +. ....-.+-+++.+++.+..+...+|+++|........
T Consensus 145 py~I~~~~~~~~~G~~~gvkIgviG~t~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~Lk~~g~D~II~l~H~G~~~d~~ 224 (341)
T 3gve_A 145 PYVINEKTLIDENGNEQKVKVGYIGFVPPQIMTWDKKNLEGQVQVQDIVESANETIPKMKAEGADVIIALAHTGIEKQAQ 224 (341)
T ss_dssp CEEEEEEEEECTTSCEEEEEEEEEEECCTTHHHHTHHHHTTTCEECCHHHHHHHHHHHHHHTTCSEEEEEECCCCCSSCC
T ss_pred CeEEEEEeeeccCCCcCCeEEEEEEeccCcccccccccccCceEEcCHHHHHHHHHHHHHhcCCCEEEEEeccCcccccc
Confidence 3445554 2 3 55566654210 00 0111223344444433334577899999987643321
Q ss_pred CCcchhHHHHHHHHHHHHh-cCCcEEEEccccCc
Q 008029 382 SHYQEFECMRQEMEALLYQ-YGVDIVFSGHVHAY 414 (580)
Q Consensus 382 ~~~~~~~~~r~~l~~Ll~k-y~VdlvlsGH~H~y 414 (580)
....+.. ... |.++ .+||++|.||.|..
T Consensus 225 ~~~~e~~--~~~---lA~~v~giD~IigGHsH~~ 253 (341)
T 3gve_A 225 SSGAENA--VFD---LATKTKGIDAIISGHQHGL 253 (341)
T ss_dssp CTTCSSC--HHH---HHHHCSCCCEEEECSSCCE
T ss_pred ccccchh--HHH---HHhcCCCCcEEEECCCCcc
Confidence 1111110 112 2222 48999999999975
|
| >3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=97.54 E-value=0.0011 Score=68.82 Aligned_cols=41 Identities=15% Similarity=0.161 Sum_probs=29.0
Q ss_pred CCeEEEEEcccCCCCC-----------------hHHHHHHHHHCCCC-EEEEccccccc
Q 008029 198 YPHRIAVIGDLGLTSN-----------------SSTTVDHLIQNDPS-LILMVGDLTYA 238 (580)
Q Consensus 198 ~~~rfav~gD~g~~~~-----------------~~~~l~~i~~~~pD-fvl~~GDl~Y~ 238 (580)
..++|+..+|+|.... ....++++.+..++ ++|..||++..
T Consensus 7 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~n~llld~GD~~qG 65 (339)
T 3jyf_A 7 VDLRIMETTDLHSNMMDFDYYKDAATEKFGLVRTASLIEQARAEVKNSVLVDNGDVIQG 65 (339)
T ss_dssp EEEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHTCSCEEEEECSCCSSS
T ss_pred eeEEEEEEeeCCCCcccccccCCCccccCCHHHHHHHHHHHHhhCCCEEEEECCCCCCC
Confidence 4689999999997421 12345666666665 77899999953
|
| >4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.0011 Score=72.70 Aligned_cols=172 Identities=17% Similarity=0.185 Sum_probs=88.7
Q ss_pred CCeEEEEEcccCCCCC------------------h---HHHHHHHHHCCCC-EEEEcccccccccccccCCCCCcccccC
Q 008029 198 YPHRIAVIGDLGLTSN------------------S---STTVDHLIQNDPS-LILMVGDLTYANQYLTTGGKAASCYSCA 255 (580)
Q Consensus 198 ~~~rfav~gD~g~~~~------------------~---~~~l~~i~~~~pD-fvl~~GDl~Y~d~~~~~GG~~~~c~~~~ 255 (580)
+.++|+..+|+|.... . ...++++.+.+++ ++|.+||++....+
T Consensus 2 f~LtILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r~~~~n~llldaGD~~qGs~~-------------- 67 (530)
T 4h1s_A 2 WELTILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIW-------------- 67 (530)
T ss_dssp CEEEEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSSHH--------------
T ss_pred EEEEEEEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHHhhCcCeEEEEeCCcccchHH--------------
Confidence 3589999999996321 1 2345555555665 67789999954211
Q ss_pred CCCCccccccHHHHHHHHHhhhhhccCCCeEEecCCCCCCCCcccccH-HHHHhhcCCCCCCC------------CCCCc
Q 008029 256 FPDAPIRETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIEPQVAGITF-KSYLTRFAVPSEES------------GSNSN 322 (580)
Q Consensus 256 ~~~~p~~e~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f-~~y~~~f~~P~~~~------------~~~~~ 322 (580)
... .+.....+.|+.+. .=.+++||||+.... ..+ ..+.....+|.-.. ...-.
T Consensus 68 ------~~~--~~g~~~i~~mN~lg---yDa~~lGNHEFd~G~--~~l~~~~~~~a~fp~L~aNv~~~~~~~~~~~~~~~ 134 (530)
T 4h1s_A 68 ------FTV--YKGAEVAHFMNALR---YDAMALGNHEFDNGV--EGLIEPLLKEAKFPILSANIKAKGPLASQISGLYL 134 (530)
T ss_dssp ------HHH--HTTHHHHHHHHHTT---CCEEECCGGGGTTTT--HHHHTTTTTTCSSCEECTTEEECTTHHHHHTTTSB
T ss_pred ------HHH--hCChHHHHHHhccC---CCEEEEchhhhccCH--HHHHHHHHhhCCCCEEEEeeeccCCcccccCCccc
Confidence 111 11222334444441 225789999996332 111 11222223332111 01123
Q ss_pred ceEEEEeCcEE--EEEEcCcc-----c------CCCcHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHH
Q 008029 323 FYYSFNAGGVH--FIMLGAYV-----D------YNSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFEC 389 (580)
Q Consensus 323 ~yYsfd~G~v~--fI~Ldt~~-----~------~~~~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~ 389 (580)
.|.-++.++++ ||.+-+.. . +...-+..+..-+.|++ .+...+|++.|..+. ..
T Consensus 135 py~I~~~~g~kIgviGltt~~~~~~~~~~~~~~f~d~v~~~~~~v~~Lr~---~g~D~II~LsH~G~~--------~d-- 201 (530)
T 4h1s_A 135 PYKVLPVGDEVVGIVGYTSKETPFLSNPGTNLVFEDEITALQPEVDKLKT---LNVNKIIALGHSGFE--------MD-- 201 (530)
T ss_dssp SEEEEEETTEEEEEEEEECTTHHHHSCCCTTEEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHH--------HH--
T ss_pred ceEEEEeccEEEeeccccccceeeeccCCCCcccCcHHHHHHHHHhhhhh---cCCCEEEEeccCCch--------HH--
Confidence 46778888755 45544321 0 11122233333344443 346679999997421 11
Q ss_pred HHHHHHHHHHhc-CCcEEEEccccCc
Q 008029 390 MRQEMEALLYQY-GVDIVFSGHVHAY 414 (580)
Q Consensus 390 ~r~~l~~Ll~ky-~VdlvlsGH~H~y 414 (580)
..+.++. +||+++.||+|.+
T Consensus 202 -----~~la~~v~giD~IlgGHsH~~ 222 (530)
T 4h1s_A 202 -----KLIAQKVRGVDVVVGGHSNTF 222 (530)
T ss_dssp -----HHHHHHSTTCCEEECCSSCCC
T ss_pred -----HHHHhcCCCCCeeccCCccce
Confidence 1233333 7999999999974
|
| >2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.87 E-value=0.01 Score=50.10 Aligned_cols=95 Identities=21% Similarity=0.294 Sum_probs=59.5
Q ss_pred CCCceEEEEeC--CCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCc--ceEEeeEEEEEeeecccCCccccc
Q 008029 76 NFPEQIALAIS--SPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKY--TSKRGGNATVYSQLYPFKGLLNYT 151 (580)
Q Consensus 76 ~~P~qi~la~~--~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~--~~~a~g~~~~y~~~~p~~g~~~~~ 151 (580)
..|..+.+... ..+++.|+|.......|. ...=.|+|....+.. .... ...
T Consensus 10 ~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~--------i~~Y~v~~~~~~~~~~~~~~~----~~~------------- 64 (114)
T 2ede_A 10 SAPKDLTVITREGKPRAVIVSWQPPLEANGK--------ITAYILFYTLDKNIPIDDWIM----ETI------------- 64 (114)
T ss_dssp SCCEEEEEEECSSCSSCEEEEEECCSSCSSC--------CSEEEEEEESCSSSCTTTSEE----EEE-------------
T ss_pred CCCcceEEEEccCCCCEEEEEECCCCCCCCc--------eeEEEEEEEeCCCCCccceEE----EEE-------------
Confidence 46888888766 488999999865322110 123456776533221 0010 000
Q ss_pred cccEEEEEeCCCCCCCEEEEEEEeCCC---CCccceEEEEcCCCCCC
Q 008029 152 SGIIHHVKIDGLDPGTKYYYKCGDSKI---PAMSAEHVFETLPLPSP 195 (580)
Q Consensus 152 ~~~~h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~~~ 195 (580)
.+....++|++|+|+|.|.+||...+. ..+|+...|+|.+.+.+
T Consensus 65 ~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~pp 111 (114)
T 2ede_A 65 SGDRLTHQIMDLNLDTMYYFRIQARNSKGVGPLSDPILFRTLKVSGP 111 (114)
T ss_dssp ETTCCEEEECSCCSSCEEEEEEEEECSSCBCCCCCCEEEECCCSSCC
T ss_pred CCCceEEEEcCCCCCCEEEEEEEEEeCCcCcCCcccEEEEecCCCCC
Confidence 112346789999999999999976543 25788899999876654
|
| >2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.61 E-value=0.019 Score=49.93 Aligned_cols=93 Identities=14% Similarity=0.108 Sum_probs=56.3
Q ss_pred CCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCC--cceEEeeEEEEEeeecccCCccccccc
Q 008029 76 NFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGK--YTSKRGGNATVYSQLYPFKGLLNYTSG 153 (580)
Q Consensus 76 ~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~--~~~~a~g~~~~y~~~~p~~g~~~~~~~ 153 (580)
..|..+++.--..+++.|+|.-.....+.-+.. ...=.|+|...... ....+. .
T Consensus 20 ~~P~~l~~~~~s~tsi~lsW~~p~~~~~~i~~~----~~~Y~v~y~~~~~~~~~~~~~~--------------------~ 75 (123)
T 2edd_A 20 LPPVGVQAVALTHDAVRVSWADNSVPKNQKTSE----VRLYTVRWRTSFSASAKYKSED--------------------T 75 (123)
T ss_dssp CCCEEEEEEEEETTEEEEEEECSSSCSSCCCSC----CCCEEEEEEETTCTTCCCCCEE--------------------E
T ss_pred CCCcceEEEEcCCCeEEEEecCCCCCcccccCc----CceEEEEEEECCCCCccEEEEe--------------------C
Confidence 468888776555899999998432111100000 01235677654211 000000 0
Q ss_pred cEEEEEeCCCCCCCEEEEEEEeCCC---CCccceEEEEcCCC
Q 008029 154 IIHHVKIDGLDPGTKYYYKCGDSKI---PAMSAEHVFETLPL 192 (580)
Q Consensus 154 ~~h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~ 192 (580)
....++|+||+|+|.|.++|...+. ..+|....|+|.+.
T Consensus 76 ~~~~~~v~gL~P~T~Y~f~V~A~n~~g~g~~S~~v~~~T~~~ 117 (123)
T 2edd_A 76 TSLSYTATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEA 117 (123)
T ss_dssp SSSEEEEESCCTTCEEEEEEEECCSSSCCCCCCCEEEECCCS
T ss_pred CceEEEecCCCCCCEEEEEEEEeCCCcccCCCCCEEEEccCC
Confidence 1245789999999999999977542 36888999999876
|
| >1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0098 Score=49.94 Aligned_cols=40 Identities=25% Similarity=0.419 Sum_probs=32.0
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCC---CCccceEEEEcCCCCCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKI---PAMSAEHVFETLPLPSP 195 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~~~ 195 (580)
..++|++|+|+|.|.+||...+. ..+|+...|+|.+.+++
T Consensus 66 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~~p 108 (111)
T 1x5l_A 66 TRATVSGLKPGTRYVFQVRARTSAGCGRFSQAMEVETGKPSGP 108 (111)
T ss_dssp SEEEECSCCTTCEEEECEEEEETTEECCCCCCEEEECCCTTSC
T ss_pred CEEEEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEEcCCCCCC
Confidence 45678999999999999966432 35788999999887654
|
| >1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.51 E-value=0.027 Score=47.81 Aligned_cols=93 Identities=19% Similarity=0.251 Sum_probs=57.9
Q ss_pred CCceEEEEeCCCCcEEEEEEeCC-CCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGD-AQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGII 155 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~-~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 155 (580)
.|..+++.....+++.|+|.-.. ..-| . ...=.|+|........... ... ....
T Consensus 20 ~P~~l~~~~~~~~sv~l~W~~p~~~~~g-~-------i~~Y~v~~~~~~~~~~~~~-------~~~----------~~~~ 74 (120)
T 1x5f_A 20 APRDVVASLVSTRFIKLTWRTPASDPHG-D-------NLTYSVFYTKEGIARERVE-------NTS----------HPGE 74 (120)
T ss_dssp CCEEEEEEEECSSCEEEEEECCSSCSSC-C-------SSEEEEEEEETTCCCCEEE-------ECS----------STTC
T ss_pred CCCCcEEEecCCCEEEEEECCCCCCCCC-c-------EEEEEEEEEECCCCCceEE-------Eec----------cCCc
Confidence 57788777666889999998643 1111 0 0234567766543221110 000 0123
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCCC---CccceEEEEcCCCCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKIP---AMSAEHVFETLPLPS 194 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~p~~~ 194 (580)
..++|+||+|+|.|.+||...+.. .+|+...|+|.+...
T Consensus 75 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~p 116 (120)
T 1x5f_A 75 MQVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQPESG 116 (120)
T ss_dssp SEEEECSCCTTCEEEEEEEEECSSCEEEECCCEEEECCCCCC
T ss_pred cEEEeCCCCCCCEEEEEEEEECCCccCCCCCCEEEEeCCCCC
Confidence 467899999999999999775533 468889999977543
|
| >1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.51 E-value=0.0092 Score=50.14 Aligned_cols=89 Identities=22% Similarity=0.280 Sum_probs=53.3
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|..+++.-...+++.|+|.-... .|..+ ..=.|+|....+..... +. +...
T Consensus 10 ~P~~~~~~~~s~~sv~l~W~~p~~-~g~~i-------~~Y~v~~~~~~~~~~~~-------~~-------------~~~~ 61 (106)
T 1x4x_A 10 QCKPPQVTCRSATCAQVNWEVPLS-NGTDV-------TEYRLEWGGVEGSMQIC-------YC-------------GPGL 61 (106)
T ss_dssp CCCCCCCEEEETTEEEEECCCCSC-SSSCC-------CEEEEEEESSTTSCCEE-------EE-------------ESCS
T ss_pred CCCCCEEEEcCCCEEEEEEcCCCC-CCCcc-------eEEEEEEEcCCCceEEE-------Ee-------------CCcc
Confidence 455555544448899999975432 12111 22346666544222111 10 0113
Q ss_pred EEEeCCCCCCCEEEEEEEeCCC---CCccceEEEEcCCCC
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKI---PAMSAEHVFETLPLP 193 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~ 193 (580)
..+|+||+|+|.|.+||...+. ..+|+...++|.+..
T Consensus 62 ~~~v~~L~p~t~Y~frV~A~n~~G~g~~S~~v~~~T~~~~ 101 (106)
T 1x4x_A 62 SYEIKGLSPATTYYCRVQALSVVGAGPFSEVVACVTPPSS 101 (106)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSCCCCBCCCEEEECCCCC
T ss_pred eEEEcCCCCCCEEEEEEEEEcCCcCCCCcCCEEEECCCCC
Confidence 4678999999999999976543 257888999998754
|
| >1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.48 E-value=0.039 Score=46.68 Aligned_cols=97 Identities=18% Similarity=0.134 Sum_probs=58.2
Q ss_pred CCCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCC---cceEEeeEEEEEeeecccCCccccc
Q 008029 75 SNFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGK---YTSKRGGNATVYSQLYPFKGLLNYT 151 (580)
Q Consensus 75 ~~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~---~~~~a~g~~~~y~~~~p~~g~~~~~ 151 (580)
...|..+.+.-...+++.|+|.-.....+. + ....=.|+|...... ..... +.
T Consensus 9 ~~~P~~~~~~~~~~~si~l~W~~p~~~~~~-----g-~i~gY~v~y~~~~~~~~~~~~~~-----~~------------- 64 (114)
T 1x4y_A 9 VAGPYITFTDAVNETTIMLKWMYIPASNNN-----T-PIHGFYIYYRPTDSDNDSDYKKD-----MV------------- 64 (114)
T ss_dssp CSCCEEEEEECSSSSCEEEEEECCCTTSCC-----C-CCCEEEEEECCTTSCSGGGCCCE-----EE-------------
T ss_pred CCCCeEEEEEecCCCEEEEEEeCCCchhcC-----C-ccceEEEEEEECCCCCCcceeeE-----ec-------------
Confidence 346888877665689999999865311000 0 001234666544332 11000 00
Q ss_pred cccEEEEEeCCCCCCCEEEEEEEeCCC---CCccceEEEEcCCCCCC
Q 008029 152 SGIIHHVKIDGLDPGTKYYYKCGDSKI---PAMSAEHVFETLPLPSP 195 (580)
Q Consensus 152 ~~~~h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~~~ 195 (580)
.+-...++|++|+|+|.|.+||..-+. ..+|+...++|.+.+.+
T Consensus 65 ~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~~~~~p 111 (114)
T 1x4y_A 65 EGDRYWHSISHLQPETSYDIKMQCFNEGGESEFSNVMICETKARSGP 111 (114)
T ss_dssp ETTCCEEEECSCCTTCEEEEEEEEECTTCCCCCCCCEEEECCCCCCS
T ss_pred CCcEeEEEcCCCCCCCEEEEEEEEEcCCccCCCcCCEEEEeCCCCCC
Confidence 011245789999999999999976432 35788999999876554
|
| >2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.34 E-value=0.024 Score=47.21 Aligned_cols=89 Identities=17% Similarity=0.152 Sum_probs=56.0
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|..+++.....+++.|+|.-....-|. ...=.|+|............ . . ..
T Consensus 10 ~P~~l~~~~~~~~si~l~W~~p~~~~g~--------i~~Y~v~~~~~~~~~~~~~~--------~----------~--~~ 61 (106)
T 2ed8_A 10 PVENLQAVSTSPTSILITWEPPAYANGP--------VQGYRLFCTEVSTGKEQNIE--------V----------D--GL 61 (106)
T ss_dssp CCEEEEEECSSTTEEEEEEECCSSCSSC--------CCEEEEEEEETTTCCEEEEE--------E----------C--SS
T ss_pred CCceeEEEecCCCEEEEEECCCCCCCCC--------eeEEEEEEEECCCCceEEEe--------C----------C--cc
Confidence 6888887766689999999865321110 12345667654432221110 0 0 13
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCC---CccceEEEEcCCCC
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIP---AMSAEHVFETLPLP 193 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~p~~ 193 (580)
.++|++|+|+|.|.+||...+.. .+|+...|+|....
T Consensus 62 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 101 (106)
T 2ed8_A 62 SYKLEGLKKFTEYSLRFLAYNRYGPGVSTDDITVVTLSDS 101 (106)
T ss_dssp CEEEESCCTTCEEEEEEEEECSSCEEEECCCEEEECCCCC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCccCCCcCCEEEEcCCCC
Confidence 45789999999999999775532 46778899997654
|
| >1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.30 E-value=0.013 Score=49.64 Aligned_cols=39 Identities=28% Similarity=0.462 Sum_probs=32.2
Q ss_pred EEeCCCCCCCEEEEEEEeCCC---CCccceEEEEcCCCCCCC
Q 008029 158 VKIDGLDPGTKYYYKCGDSKI---PAMSAEHVFETLPLPSPT 196 (580)
Q Consensus 158 v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~~~~ 196 (580)
++|+||+|+|.|.+||...+. ..+|+...|+|.+.+++.
T Consensus 64 ~~i~~L~p~t~Y~f~V~A~~~~G~g~~S~~~~~~T~~~~gp~ 105 (107)
T 1x5a_A 64 VLLTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRTSPPSGPS 105 (107)
T ss_dssp EEEESCCSSCEEEEEEEEECSSSCCCCCCCEEEECCCCSCCC
T ss_pred EEECCCCCCCEEEEEEEEECCCccCCCCCCEEEEECCCCCCC
Confidence 789999999999999977543 357889999999877653
|
| >1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.30 E-value=0.018 Score=48.70 Aligned_cols=89 Identities=18% Similarity=0.218 Sum_probs=54.8
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|..+++.-...+++.|+|.......|. ...=.|+|............. ...
T Consensus 20 ~P~~l~~~~~~~~si~l~W~~p~~~~~~--------i~~Y~v~~~~~~~~~~~~~~~--------------------~~~ 71 (116)
T 1x5g_A 20 PAPNLRAYAASPTSITVTWETPVSGNGE--------IQNYKLYYMEKGTDKEQDVDV--------------------SSH 71 (116)
T ss_dssp CCSSCEEEEEETTEEEEECCCCSCCSSC--------CSEEEEEEEETTCCCCCCEEE--------------------CSS
T ss_pred CCCccEEEecCCCEEEEEEeCCCCCCCc--------ccEEEEEEEECCCCccEEEec--------------------CCc
Confidence 5777777655588999999864321110 123346665544322211100 114
Q ss_pred EEEeCCCCCCCEEEEEEEeCCC---CCccceEEEEcCCCC
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKI---PAMSAEHVFETLPLP 193 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~ 193 (580)
.++|+||+|+|.|.+||...+. ..+|+...|+|.+..
T Consensus 72 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 111 (116)
T 1x5g_A 72 SYTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLSDS 111 (116)
T ss_dssp EEEECSCCTTCEEEEEEEEECSSCCCCBCCCCCEECCCSS
T ss_pred eEEEcCCCCCCEEEEEEEEEcCCCcCCCCCCEEEECCCCC
Confidence 5678999999999999976442 256888899998654
|
| >2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=96.29 E-value=0.0017 Score=64.64 Aligned_cols=39 Identities=18% Similarity=0.313 Sum_probs=26.0
Q ss_pred eEEEEEcccCCCCCh-HHHHHHHHHCCC-CEEEEccccccc
Q 008029 200 HRIAVIGDLGLTSNS-STTVDHLIQNDP-SLILMVGDLTYA 238 (580)
Q Consensus 200 ~rfav~gD~g~~~~~-~~~l~~i~~~~p-Dfvl~~GDl~Y~ 238 (580)
.|++++||+|..... .++++.+....+ |.++++||+++.
T Consensus 19 ~~i~visDiHg~~~~l~~~l~~~~~~~~~d~ii~~GD~vd~ 59 (262)
T 2qjc_A 19 GRVIIVGDIHGCRAQLEDLLRAVSFKQGSDTLVAVGDLVNK 59 (262)
T ss_dssp SCEEEECCCTTCHHHHHHHHHHHTCCTTTSEEEECSCCSSS
T ss_pred CeEEEEeCCCCCHHHHHHHHHHHhccCCCCEEEEecCCCCC
Confidence 489999999954211 223333333344 999999999953
|
| >2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.27 E-value=0.018 Score=48.29 Aligned_cols=92 Identities=20% Similarity=0.191 Sum_probs=54.2
Q ss_pred CceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEEE
Q 008029 78 PEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIHH 157 (580)
Q Consensus 78 P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h~ 157 (580)
|..+.+.....+ +.|+|.-....-|..+ ..=.|+|.......+... +... . ..+-...
T Consensus 10 P~~~~~~~~~~~-v~l~W~~P~~~~G~pi-------~~Y~v~~~~~~~~~~~~~------~~~~-~-------~~~~~~~ 67 (105)
T 2haz_A 10 PSIDQVEPYSST-AQVQFDEPEATGGVPI-------LKYKAEWRAVGEEVWHSK------WYDA-K-------EASMEGI 67 (105)
T ss_dssp CEEEEEEECSSC-EEEEEECCSCCTTSCC-------CEEEEEEEETTCCCCEEE------EEEH-H-------HHHHHSE
T ss_pred CCCCEEEEcCCc-EEEEEcCCcccCCccc-------cEEEEEEEECCCCCCccc------eEEc-c-------ccCCccE
Confidence 777777665565 9999986533222101 223467766543211110 0000 0 0011245
Q ss_pred EEeCCCCCCCEEEEEEEeCCC---CCccceEEEEcCC
Q 008029 158 VKIDGLDPGTKYYYKCGDSKI---PAMSAEHVFETLP 191 (580)
Q Consensus 158 v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p 191 (580)
++|+||+|+|.|.+||...+. ..+|+...|+|.|
T Consensus 68 ~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~T~p 104 (105)
T 2haz_A 68 VTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQP 104 (105)
T ss_dssp EEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred EEECCCCCCCEEEEEEEEEcCCccCCCcCCEeeEEec
Confidence 688999999999999966442 2578889999987
|
| >3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.20 E-value=0.021 Score=61.34 Aligned_cols=141 Identities=18% Similarity=0.227 Sum_probs=79.5
Q ss_pred CeEEEEEcccCCCCCh-H--HH----HHHHH-----------HCCCCEEEEcccccccccccccCCCCCcccccCCCCCc
Q 008029 199 PHRIAVIGDLGLTSNS-S--TT----VDHLI-----------QNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAP 260 (580)
Q Consensus 199 ~~rfav~gD~g~~~~~-~--~~----l~~i~-----------~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p 260 (580)
..++++++|+|.+... . .. ++.+. ..+...+|++||.+...+... +..
T Consensus 200 ~~~ialVSGL~igs~~~~~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~~~~--------------e~~ 265 (476)
T 3e0j_A 200 DRFVLLVSGLGLGGGGGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSR--------------DSI 265 (476)
T ss_dssp CCEEEEECCCCBTSSCHHHHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC----------------------
T ss_pred CCEEEEECCcccCCCcccchHHHHHHHHHHcCCCCCccccchhhceeEEEEECCccccccccc--------------hhh
Confidence 5689999999998762 1 11 22222 246889999999996531100 000
Q ss_pred ccccc---------HHHHHHHHHhhhhhccCCCeEEecCCCCCCCCccc-----c-cHHHHHhhcCCCCCCCCCCCcceE
Q 008029 261 IRETY---------QPRWDGWGRFMEPLTSRVPMMVIEGNHEIEPQVAG-----I-TFKSYLTRFAVPSEESGSNSNFYY 325 (580)
Q Consensus 261 ~~e~y---------~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~-----~-~f~~y~~~f~~P~~~~~~~~~~yY 325 (580)
+.+.| ....+.+.+++..+...+|+.+.|||||-....-. + -|.. ...|. + -....|- |
T Consensus 266 ~~~~y~~~~~~~~~~~~~~~ld~~L~~l~~~i~V~lmPG~~DP~~~~lPQqplh~~lfp~-s~~~~---~-~~~vtNP-~ 339 (476)
T 3e0j_A 266 NKAKYLTKKTQAASVEAVKMLDEILLQLSASVPVDVMPGEFDPTNYTLPQQPLHPCMFPL-ATAYS---T-LQLVTNP-Y 339 (476)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHHTTSCEEEECCTTSSSCSSSSCCCCCTTSCHH-HHTST---T-EEECCSS-E
T ss_pred hhhhccccccchhhHHHHHHHHHHHHhcccCceEEecCCCCCcccccCCCCCcCHHHhhh-hhhcC---c-cEEeCCC-e
Confidence 11111 12345666777888899999999999997643211 0 1110 01110 0 0001122 6
Q ss_pred EEEeCcEEEEEEcCcc-----cCCCcHHHHHHHHHHHHh
Q 008029 326 SFNAGGVHFIMLGAYV-----DYNSTGAQYAWLKEDLHK 359 (580)
Q Consensus 326 sfd~G~v~fI~Ldt~~-----~~~~~~~Q~~WLe~~L~~ 359 (580)
.|++++++|++..... .|...+.-++.|++.|+.
T Consensus 340 ~~~i~G~~~LgtsGqnidDi~ky~~~~~~l~~me~~Lkw 378 (476)
T 3e0j_A 340 QATIDGVRFLGTSGQNVSDIFRYSSMEDHLEILEWTLRV 378 (476)
T ss_dssp EEEETTEEEEECSSHHHHHHHHHSCCCCHHHHHHHHHHB
T ss_pred EEEECCEEEEEECCCCHHHHHhcCCCCCHHHHHHHHHHH
Confidence 6999999999877532 122334566788888876
|
| >1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.19 E-value=0.014 Score=49.92 Aligned_cols=95 Identities=16% Similarity=0.154 Sum_probs=56.2
Q ss_pred CCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccE
Q 008029 76 NFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGII 155 (580)
Q Consensus 76 ~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 155 (580)
..|..|++.--..+++.|+|.-....-+.-+ .....=.|+|........ ...+ .....
T Consensus 10 ~~P~~l~~~~~s~tsi~lsW~~p~~~~~~~~----~~~~~Y~v~y~~~~~~~~------~~~~------------~~~~~ 67 (113)
T 1x5j_A 10 MPPVGVQASILSHDTIRITWADNSLPKHQKI----TDSRYYTVRWKTNIPANT------KYKN------------ANATT 67 (113)
T ss_dssp CCCEEEEEEEEETTEEEEEEECTTSCSSSCC----CSSCEEEEEECBSSSSSC------CCEE------------CCBCS
T ss_pred CCCcceEEEEecCCEEEEEecCCCCcccccc----CcCceEEEEEEECCCCCe------EEEE------------EecCc
Confidence 4688888766669999999985432111000 000123466765211100 0000 00112
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCC---CCccceEEEEcCCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKI---PAMSAEHVFETLPL 192 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~ 192 (580)
..++|+||+|+|.|.++|...+. ..+|....++|.+.
T Consensus 68 ~~~~i~gL~P~T~Y~f~V~A~~~~G~g~~S~~v~~~T~~~ 107 (113)
T 1x5j_A 68 LSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 107 (113)
T ss_dssp SEEEEESCCTTCEECCEEEEECSSCBCCCCCCCCEECCCS
T ss_pred CEEEeCCCCCCcEEEEEEEEecCCccCCCcccEEeeccCC
Confidence 46789999999999999976442 36888889999876
|
| >2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.19 E-value=0.004 Score=51.56 Aligned_cols=88 Identities=16% Similarity=0.240 Sum_probs=51.8
Q ss_pred CCCceEEEEeCCCCcEEEEEEeCC--CCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccc
Q 008029 76 NFPEQIALAISSPTSMWVSWVSGD--AQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSG 153 (580)
Q Consensus 76 ~~P~qi~la~~~~~sm~V~W~T~~--~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~ 153 (580)
..|..+++.-...+++.|+|.... ...|. ...=.|+|............+
T Consensus 10 ~~P~~l~~~~~~~~si~l~W~~p~~~~~~g~--------i~~Y~i~~~~~~~~~~~~~~~-------------------- 61 (103)
T 2edy_A 10 GFPQNLHVTGLTTSTTELAWDPPVLAERNGR--------IISYTVVFRDINSQQELQNIT-------------------- 61 (103)
T ss_dssp CCCEEEECSSBCSSCEECEEECCCTTSCSSC--------CCEEEEEEEETTSCCEEEEEE--------------------
T ss_pred CCCeeeEEEecCCCEEEEEECCCCCcCCCCc--------EeEEEEEEEECCCCccEEEcC--------------------
Confidence 357777665444899999998652 11110 012345665544321111100
Q ss_pred cEEEEEeCCCCCCCEEEEEEEeCCC---CCccceEEEEcCC
Q 008029 154 IIHHVKIDGLDPGTKYYYKCGDSKI---PAMSAEHVFETLP 191 (580)
Q Consensus 154 ~~h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p 191 (580)
....+.|+||+|+|.|.+||...+. ..+|+...|+|.|
T Consensus 62 ~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~p 102 (103)
T 2edy_A 62 TDTRFTLTGLKPDTTYDIKVRAWTSKGSGPLSPSIQSRTMP 102 (103)
T ss_dssp SSSCCEECSCCTTCCEEEECCEECSSCBCCCCCCCCCCCCC
T ss_pred CcceEEEcCCCCCCEEEEEEEEECCCCCCCCCCCEEEEecc
Confidence 0133578999999999999966442 2467777888865
|
| >2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.11 E-value=0.027 Score=47.13 Aligned_cols=88 Identities=15% Similarity=0.157 Sum_probs=54.2
Q ss_pred CCceEEEEeC--CCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCcccccccc
Q 008029 77 FPEQIALAIS--SPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGI 154 (580)
Q Consensus 77 ~P~qi~la~~--~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 154 (580)
.|..+.+... ..+++.|+|.-.....|. ...=.|+|....+..+..... ..
T Consensus 10 ~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~--------i~~Y~v~~~~~~~~~~~~~~~------------------~~- 62 (108)
T 2dm4_A 10 APRNLQLSLPREAEGVIVGHWAPPIHTHGL--------IREYIVEYSRSGSKMWASQRA------------------AS- 62 (108)
T ss_dssp SCEEEEEECCTTCSSCEEEEEECCSCCSSC--------EEEEEEEEEETTCSCCEEEEE------------------SS-
T ss_pred CCcCeEEEEeccCCCEEEEEEcCCCCCCCc--------EEEEEEEEEECCCCCeEEecC------------------Cc-
Confidence 6888887763 488999999864311110 012345565544322221100 01
Q ss_pred EEEEEeCCCCCCCEEEEEEEeCCCC---CccceEEEEcCCC
Q 008029 155 IHHVKIDGLDPGTKYYYKCGDSKIP---AMSAEHVFETLPL 192 (580)
Q Consensus 155 ~h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~p~ 192 (580)
..++|++|+|+|.|.+||...+.. .+|+...++|.+.
T Consensus 63 -~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 102 (108)
T 2dm4_A 63 -NFTEIKNLLVNTLYTVRVAAVTSRGIGNWSDSKSITTIKG 102 (108)
T ss_dssp -SEEEECSCCSSCEEEEEEEEEESSCEEEECCCEEEECCSC
T ss_pred -cEEEeCCCCCCCEEEEEEEEECCCceeCCCCCEEEECCCC
Confidence 256899999999999999764432 5788899999653
|
| >2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.07 E-value=0.015 Score=48.60 Aligned_cols=92 Identities=17% Similarity=0.271 Sum_probs=53.8
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|..+++.-...+++.|+|.-.....|. ...=.|+|........... .. ..-..
T Consensus 10 ~P~~l~~~~~~~~sv~l~W~~p~~~~g~--------i~~Y~v~~~~~~~~~~~~~-----~~-------------~~~~~ 63 (108)
T 2djs_A 10 TVPIMHQVSATMRSITLSWPQPEQPNGI--------ILDYEIRYYEKEHNEFNSS-----MA-------------RSQTN 63 (108)
T ss_dssp CCSCCEEEEECSSEEEEECCCCSCCSSC--------EEEEEEEEEETTSCSTTCE-----EE-------------EESSS
T ss_pred CCcceEEEecCCCEEEEEECCCCCCCCe--------EEEEEEEEEECCCCCccee-----EE-------------ecCcc
Confidence 4666766655588999999854221110 0112345544332211100 00 01124
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCC---CccceEEEEcCCCCC
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIP---AMSAEHVFETLPLPS 194 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~p~~~ 194 (580)
.++|+||+|+|.|.+||...+.. .+|+...|+|.+...
T Consensus 64 ~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~~ 104 (108)
T 2djs_A 64 TARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLTDSG 104 (108)
T ss_dssp EEEEESCCTTCEEEEEEEEEESSCEEEECCCEEEECCCSSC
T ss_pred EEEEcCCCCCCEEEEEEEEEeCCEECCCCCCEEEEeCCCCc
Confidence 56789999999999999764432 478889999987654
|
| >2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.07 E-value=0.066 Score=45.54 Aligned_cols=91 Identities=16% Similarity=0.129 Sum_probs=54.9
Q ss_pred CCCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCcccccccc
Q 008029 75 SNFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGI 154 (580)
Q Consensus 75 ~~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 154 (580)
...|..++++--..+++.|+|.-.. |. ...=.|+|....+...... .+ ++-
T Consensus 8 ~~pP~~l~~~~vt~tsi~vsW~pp~---~~--------i~~Y~I~y~~~~~~~~~~~----~v--------------~~~ 58 (108)
T 2ee3_A 8 LAPPRHLGFSDVSHDAARVFWEGAP---RP--------VRLVRVTYVSSEGGHSGQT----EA--------------PGN 58 (108)
T ss_dssp CCCSSCEEEESCCSSCEEEEESCCS---SC--------CSEEEEEEEETTTCCBCCE----EE--------------ETT
T ss_pred CCCCceEEEEEccCCeEEEEeeCCC---CC--------ccEEEEEEEeCCCCceeEE----Ec--------------CCC
Confidence 3468888887666999999997432 11 1233567765443211110 00 112
Q ss_pred EEEEEeCCCCCCCEEEEEEEeCCCCCccc--eEEEEcCCCCC
Q 008029 155 IHHVKIDGLDPGTKYYYKCGDSKIPAMSA--EHVFETLPLPS 194 (580)
Q Consensus 155 ~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~p~~~ 194 (580)
...+.|+||+|+|.|..+|..-+..+.|. ...|+|.+.+.
T Consensus 59 ~t~~~l~~L~p~T~Y~v~V~A~~~~g~s~p~~~~~~T~~vP~ 100 (108)
T 2ee3_A 59 ATSAMLGPLSSSTTYTVRVTCLYPGGGSSTLTGRVTTKKAPS 100 (108)
T ss_dssp CCEEEECSCCSSCEEEEEEEEECTTSCEEEEEEEEECCCCCC
T ss_pred cCEEEcCCCCCCCEEEEEEEEEeCCCcCCCccCEEEeCCCCC
Confidence 24578999999999999997755444443 34689975443
|
| >2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.06 E-value=0.026 Score=47.48 Aligned_cols=91 Identities=14% Similarity=0.090 Sum_probs=53.5
Q ss_pred CCceEEEEe-CCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccE
Q 008029 77 FPEQIALAI-SSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGII 155 (580)
Q Consensus 77 ~P~qi~la~-~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 155 (580)
.|..+.+.- ...+++.|+|......-|..+ ..=.|+|.......+..+. . +..
T Consensus 11 ~P~~~~~~~~~~~~sv~l~W~~P~~~~~~~i-------~~Y~v~~~~~~~~~~~~~~------~-------------~~~ 64 (110)
T 2crz_A 11 PCLPPRLQGRPKAKEIQLRWGPPLVDGGSPI-------SCYSVEMSPIEKDEPREVY------Q-------------GSE 64 (110)
T ss_dssp CCCCCEECSCCCSSEEEEECCCCSCCTTSCC-------CEEEEEEECTTSCCCEEEE------E-------------ESC
T ss_pred CCCCceeccccCCCEEEEEeCCCCCCCCcee-------EEEEEEEEeCCCCceEEEE------e-------------CCc
Confidence 566666632 337899999964322111110 2234666654332222111 0 011
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCC---CCccceEEEEcCCCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKI---PAMSAEHVFETLPLP 193 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~ 193 (580)
...+|++|+|+|.|.|||...+. ..+|+...++|.+.+
T Consensus 65 ~~~~v~~L~p~t~Y~frV~A~n~~G~g~~S~~~~~~T~~~~ 105 (110)
T 2crz_A 65 VECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDITTAPGS 105 (110)
T ss_dssp SEEEEESCCTTCEEEECCEEECSSCBCCCCCCEEEECCCSC
T ss_pred EEEEECCcCCCCEEEEEEEEEcCCccCCCCCccccccCCCC
Confidence 34578999999999999976543 257888899998754
|
| >2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=96.04 E-value=0.003 Score=63.64 Aligned_cols=39 Identities=15% Similarity=0.176 Sum_probs=25.3
Q ss_pred eEEEEEcccCCCCCh-HHHHHHHHH-CCCCEEEEccccccc
Q 008029 200 HRIAVIGDLGLTSNS-STTVDHLIQ-NDPSLILMVGDLTYA 238 (580)
Q Consensus 200 ~rfav~gD~g~~~~~-~~~l~~i~~-~~pDfvl~~GDl~Y~ 238 (580)
+|++++||+|..... .+.++.+.. .++|.++++||+++.
T Consensus 1 M~i~vigDiHG~~~~l~~ll~~~~~~~~~d~~v~lGD~vdr 41 (280)
T 2dfj_A 1 MATYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVAR 41 (280)
T ss_dssp -CEEEECCCCSCHHHHHHHHHHTTCCTTTCEEEECSCCSSS
T ss_pred CeEEEEecCCCCHHHHHHHHHHhCCCCCCCEEEEeCCcCCC
Confidence 478999999965321 222333222 357999999999953
|
| >1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.01 E-value=0.04 Score=46.07 Aligned_cols=37 Identities=24% Similarity=0.204 Sum_probs=29.3
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCC---CccceEEEEcCCCC
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIP---AMSAEHVFETLPLP 193 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~p~~ 193 (580)
..+|++|+|+|.|+|||...+.. .+|+...++|.+..
T Consensus 65 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~ 104 (109)
T 1x5x_A 65 AYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCPDS 104 (109)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSCEEEECCCEEEECCCCC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCCCcCCccCEEeEeCCCC
Confidence 46789999999999999876533 36778889998754
|
| >3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic} | Back alignment and structure |
|---|
Probab=95.99 E-value=0.037 Score=45.45 Aligned_cols=88 Identities=23% Similarity=0.220 Sum_probs=53.6
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|.++.+.-...+++.|+|.-.... ...=.|+|....+...... ... +.-..
T Consensus 4 ~P~~l~v~~~~~~sv~l~W~~p~~~-----------i~~Y~v~y~~~~~~~~~~~----~~~-------------~~~~~ 55 (98)
T 3teu_A 4 APTDLQVTNVTDTSITVSWTPPSAT-----------ITGYRITYTPSNGPGEPKE----LTV-------------PPSST 55 (98)
T ss_dssp CCEEEEEEEECSSCEEEEEECCSSC-----------CSEEEEEEEETTSCSCCEE----EEE-------------CTTCS
T ss_pred CCCceEEEEecCCEEEEEEeCCCCc-----------ccEEEEEEEECCCCCceEE----EEc-------------CCCcC
Confidence 5788877655588999999864211 0223567764332111100 000 01224
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCCCccceEEEEcCCC
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIPAMSAEHVFETLPL 192 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~~~F~T~p~ 192 (580)
.++|+||+|+|.|.+||...+..+.|+...+.+++.
T Consensus 56 ~~~i~~L~p~t~Y~~~V~A~n~~G~s~p~~~~~~~~ 91 (98)
T 3teu_A 56 SVTITGLTPGVEYVVSVYALKDNQESPPLVGTQTTG 91 (98)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECS
T ss_pred EEEecCCCCCCEEEEEEEEEeCCCCCCCeEEEeccC
Confidence 578999999999999998766556676666665554
|
| >2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.98 E-value=0.019 Score=48.24 Aligned_cols=92 Identities=22% Similarity=0.330 Sum_probs=55.6
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCC--cceEEeeEEEEEeeecccCCcccccccc
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGK--YTSKRGGNATVYSQLYPFKGLLNYTSGI 154 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~--~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 154 (580)
.|..+++.-...+++.|+|.-.....|. ...=.|+|....+. ..... .. .+.
T Consensus 10 ~p~~l~~~~~~~~sv~l~W~~p~~~~g~--------i~~Y~v~~~~~~~~~~~~~~~------~~-----------~~~- 63 (109)
T 2e7h_A 10 AVSDIRVTRSSPSSLSLAWAVPRAPSGA--------VLDYEVKYHEKGAEGPSSVRF------LK-----------TSE- 63 (109)
T ss_dssp CCCCCEEEEEETTEEEEECCCCCCSSSC--------CCEEEEEEEETTCCSTTTSEE------EE-----------ESS-
T ss_pred CCCccEEEecCCCEEEEEeCCCCCCCCc--------EeEEEEEEEECCCCCCceeEE------Ec-----------cCC-
Confidence 3677777655589999999754321110 01234666554311 11100 00 011
Q ss_pred EEEEEeCCCCCCCEEEEEEEeCCC---CCccceEEEEcCCCCCC
Q 008029 155 IHHVKIDGLDPGTKYYYKCGDSKI---PAMSAEHVFETLPLPSP 195 (580)
Q Consensus 155 ~h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~~~ 195 (580)
..++|+||+|+|.|.+||...+. ..+|+...|+|.+.+.+
T Consensus 64 -~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~~p 106 (109)
T 2e7h_A 64 -NRAELRGLKRGASYLVQVRARSEAGYGPFGQEHHSQTQLDSGP 106 (109)
T ss_dssp -SEEEEESCCTTSCEEEEEEEECSSCBCCCCSCEECCCCCCSSC
T ss_pred -CEEEECCCCCCCeEEEEEEEEeCCccCCCCCCEEEEcCCCCCC
Confidence 25788999999999999976543 35788999999886543
|
| >2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.95 E-value=0.038 Score=47.01 Aligned_cols=94 Identities=16% Similarity=0.193 Sum_probs=55.8
Q ss_pred CCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccE
Q 008029 76 NFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGII 155 (580)
Q Consensus 76 ~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 155 (580)
..|..+++.-...+++.|+|.-... |. ...=.|+|.......... ..... .+..
T Consensus 20 ~~P~~l~~~~~~~~sv~l~W~~p~~--g~--------i~~Y~v~~~~~~~~~~~~---~~~~~-------------~~~~ 73 (119)
T 2ee2_A 20 EAPTEVGVKVLSSSEISVHWEHVLE--KI--------VESYQIRYWAAHDKEEAA---NRVQV-------------TSQE 73 (119)
T ss_dssp CCCCSCEEEEEETTEEEEECCCCSC--TT--------CCEEEEEEEESSSCGGGC---EEEEE-------------ETTC
T ss_pred CCCCcEEEEEccCCEEEEEecCCCC--Cc--------cceEEEEEEECCCcccCc---EEEEc-------------CCCE
Confidence 3576777655558899999975432 11 012345665433211100 00000 1122
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCC---CCccceEEEEcCCCCCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKI---PAMSAEHVFETLPLPSP 195 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~~~ 195 (580)
..++|+||+|+|.|.+||...+. ..+|+...|+|.+.+.+
T Consensus 74 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~pp 116 (119)
T 2ee2_A 74 YSARLENLLPDTQYFIEVGACNSAGCGPPSDMIEAFTKKASGP 116 (119)
T ss_dssp SEEEECSCCTTCEEEEEEEEECSSSCCCCCCCEEEECCCCCCS
T ss_pred eEEEECCCCCCCEEEEEEEEEcCCccCCCCCCEEEECCCCCCC
Confidence 46789999999999999976442 25788889999876543
|
| >1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.92 E-value=0.043 Score=46.10 Aligned_cols=88 Identities=18% Similarity=0.254 Sum_probs=53.9
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|..+++.-...+++.|+|.-... + ....=.|+|........... . .....
T Consensus 20 ~P~~l~~~~~~~~sv~l~W~~p~~--~--------~i~~Y~v~~~~~~~~~~~~~---------~----------~~~~~ 70 (115)
T 1x5z_A 20 QPLNFKAEPESETSILLSWTPPRS--D--------TIANYELVYKDGEHGEEQRI---------T----------IEPGT 70 (115)
T ss_dssp CCEEEEEECSSSSEEEEEEECCSC--C--------CCCEEEECBEESSSCCCBCC---------E----------ECSSS
T ss_pred CCccCEeeeCCCCEEEEEEcCCCC--C--------CccEEEEEEEeCCCCCceEE---------e----------cCCCc
Confidence 577777766568999999985421 1 01123345544322111000 0 00114
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCC---CccceEEEEcCCCC
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIP---AMSAEHVFETLPLP 193 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~p~~ 193 (580)
.++|+||+|+|.|.+||...+.. .+|+...|+|.+..
T Consensus 71 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 110 (115)
T 1x5z_A 71 SYRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQSS 110 (115)
T ss_dssp EEEEECCCTTCEEEECEEEECSSCEEEECCCEEEECCCCC
T ss_pred EEEECCCCCCCeEEEEEEEECCCcccCCCcCEEEecCCCC
Confidence 56789999999999999775433 46788999998754
|
| >2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.76 E-value=0.058 Score=45.58 Aligned_cols=94 Identities=14% Similarity=0.203 Sum_probs=55.9
Q ss_pred CCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccE
Q 008029 76 NFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGII 155 (580)
Q Consensus 76 ~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 155 (580)
..|..+++.....+++.|+|.-.....| . ...=.|+|........... ... ....
T Consensus 19 ~~P~~l~~~~~~~~sv~l~W~~p~~~~~-~-------i~~Y~v~~~~~~~~~~~~~-------~~~----------~~~~ 73 (119)
T 2ed7_A 19 SAPRDVVPVLVSSRFVRLSWRPPAEAKG-N-------IQTFTVFFSREGDNRERAL-------NTT----------QPGS 73 (119)
T ss_dssp CCCSCCEEEEECSSCEEEECCCCSCCSS-C-------EEEEEEEEEESSCCCCEEE-------ECC----------CTTC
T ss_pred cCCcceEEEecCCCEEEEEEeCCCCCCC-c-------EEEEEEEEEeCCCCcceee-------Eee----------cCCc
Confidence 3688887776668899999975332100 0 0122355554433221110 000 0113
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCC---CCccceEEEEcCCCCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKI---PAMSAEHVFETLPLPS 194 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~~ 194 (580)
..+.|++|+|+|.|.+||...+. ..+|+...++|.+...
T Consensus 74 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~p 115 (119)
T 2ed7_A 74 LQLTVGNLKPEAMYTFRVVAYNEWGPGESSQPIKVATQPESG 115 (119)
T ss_dssp CEEEECSCCSSSEEEECCEEEESSCBCSCCCCEEEECCCCSC
T ss_pred eEEEeCCCCCCCEEEEEEEEEcCCccCCCcCCEEEEeCCCCC
Confidence 45788999999999999965432 3578889999987543
|
| >2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.76 E-value=0.045 Score=46.74 Aligned_cols=90 Identities=16% Similarity=0.189 Sum_probs=53.6
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|..+.+.....+++.|+|.-....... ++ ...=.|+|........... . .+...
T Consensus 31 ~P~~l~~~~~~~~sv~l~W~~p~~~~~~-----g~-i~~Y~v~~~~~~~~~~~~~------~-------------~~~~~ 85 (124)
T 2ed9_A 31 PPQNVSLEVVNSRSIKVSWLPPPSGTQN-----GF-ITGYKIRHRKTTRRGEMET------L-------------EPNNL 85 (124)
T ss_dssp CCBSCCEEEEETTEEEEECBCCCTTTCC-----SC-CCEEEEEEEESSSSCCEEE------E-------------CSSCS
T ss_pred CCeeeEEEEcCCCEEEEEEECcCCcCCC-----cE-EeEEEEEEEECCCCcceEE------e-------------cCCcC
Confidence 5777776655588999999764321000 00 0123466655443221110 0 01224
Q ss_pred EEEeCCCCCCCEEEEEEEeCCC---CCccceEEEEcCC
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKI---PAMSAEHVFETLP 191 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p 191 (580)
.++|++|+|+|.|.+||...+. ..+|+...|+|..
T Consensus 86 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~e 123 (124)
T 2ed9_A 86 WYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAETPE 123 (124)
T ss_dssp EEEEECCCSSCEEEECEEEECSSCBCCCCCCEEEECCC
T ss_pred EEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEEECCC
Confidence 5678999999999999976442 2578888898864
|
| >3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.74 E-value=0.13 Score=42.55 Aligned_cols=79 Identities=18% Similarity=0.201 Sum_probs=48.2
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|..+.+.-...+++.|+|.-.... ...=.|+|........... .. . ++-.-
T Consensus 4 ~P~~l~~~~~~~~sv~lsW~pP~~~-----------i~~Y~v~y~~~~~~~~~~~----~~---~----------~~~~t 55 (100)
T 3b83_A 4 PPFNIKVTNITLTTAVVTWQPPILP-----------IEGILVTFGRKNDPSDETT----VD---L----------TSSIT 55 (100)
T ss_dssp CCEEEEEESCCSSCEEEEEECCSSC-----------CSEEEEEEEESSCTTTCEE----EE---E----------CTTEE
T ss_pred cCCccEEEEecCCEEEEEEcCCccc-----------CCEEEEEEEECCCCCCceE----EE---E----------CCcce
Confidence 5888887765689999999753210 1234567765432111110 00 0 12335
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCCCccc
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIPAMSA 183 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~~~S~ 183 (580)
.++|+||+|+|.|.+||...+..+.|+
T Consensus 56 ~~~i~~L~p~t~Y~~~V~A~n~~g~s~ 82 (100)
T 3b83_A 56 SLTLTNLEPNTTYEIRIVARNGQQYSP 82 (100)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEECC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCCCCC
Confidence 678999999999999998765444544
|
| >2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A | Back alignment and structure |
|---|
Probab=95.58 E-value=0.11 Score=43.40 Aligned_cols=90 Identities=18% Similarity=0.207 Sum_probs=51.4
Q ss_pred CCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCC-CcceEEeeEEEEEeeecccCCcccccccc
Q 008029 76 NFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSG-KYTSKRGGNATVYSQLYPFKGLLNYTSGI 154 (580)
Q Consensus 76 ~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~-~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 154 (580)
..|.++++.--..+++.|+|.-.. |. + ..=.|+|..... ...... . . ++-
T Consensus 4 ~~P~~l~v~~~t~~sv~lsW~~p~---~~----i----~~Y~v~y~~~~~~~~~~~~-----~---v----------~~~ 54 (104)
T 2rb8_A 4 DAPSQIEVKDVTDTTALITWMPPS---QP----V----DGFELTYGIKDVPGDRTTI-----D---L----------TED 54 (104)
T ss_dssp CCCEEEEEESCCSSCEEEEEECCS---SC----C----SEEEEEEEETTCTTCCEEE-----E---E----------ETT
T ss_pred CCCCccEEEEecCCeEEEEEcCCC---Cc----c----ceEEEEEEECcCCCceEEE-----E---c----------CCC
Confidence 358888877655899999997532 10 0 123567754321 111110 0 0 011
Q ss_pred EEEEEeCCCCCCCEEEEEEEeCCCCCc--cceEEEEcCCCCC
Q 008029 155 IHHVKIDGLDPGTKYYYKCGDSKIPAM--SAEHVFETLPLPS 194 (580)
Q Consensus 155 ~h~v~l~gL~P~T~Y~Yrvg~~~~~~~--S~~~~F~T~p~~~ 194 (580)
...++|+||+|||.|.++|...+..+. .....|+|.+...
T Consensus 55 ~~~~~l~~L~p~t~Y~~~V~A~~~~g~s~p~~~~~~T~~~~~ 96 (104)
T 2rb8_A 55 ENQYSIGNLKPDTEYEVSLISRRGDMSSNPAKETFTTGLAAA 96 (104)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCC---
T ss_pred cCEEEeCCCCCCCEEEEEEEEEeCCccCCCEEEEEECCCCcc
Confidence 245689999999999999966443332 3356788876543
|
| >2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.58 E-value=0.047 Score=45.02 Aligned_cols=88 Identities=17% Similarity=0.189 Sum_probs=53.6
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCC-cceEEeeEEEEEeeecccCCccccccccE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGK-YTSKRGGNATVYSQLYPFKGLLNYTSGII 155 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~-~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 155 (580)
.|..+.+.-...+++.|+|.... +.. ...=.|+|...... ....+. + ...
T Consensus 10 ~P~~~~~~~~~~~sv~l~W~~~~---~~~-------i~~Y~v~~~~~~~~~~~~~~~-------------~------~~~ 60 (106)
T 2dju_A 10 PPIDLVVTETTATSVTLTWDSGN---SEP-------VTYYGIQYRAAGTEGPFQEVD-------------G------VAT 60 (106)
T ss_dssp CCEEEEEEEEETTEEEEEEECCC---SSC-------CSEEEEEEEETTCCSCCCCBC-------------C------CCS
T ss_pred CCCCcEEEeccCCEEEEEEcCCC---CCC-------ceEEEEEEEECCCCCCeEEcc-------------C------CCc
Confidence 57777776545889999998542 110 12334666554322 111100 0 011
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCCC---CccceEEEEcCCCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKIP---AMSAEHVFETLPLP 193 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~p~~ 193 (580)
..++|++|+|+|.|.|||...+.. .+|+...++|.+..
T Consensus 61 ~~~~i~~L~p~t~Y~~~V~A~n~~G~~~~S~~~~~~T~~~~ 101 (106)
T 2dju_A 61 TRYSIGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQS 101 (106)
T ss_dssp SEEEEESCCTTCEEEEEEEEECSSCBCCCCCCEEEECCCSS
T ss_pred cEEEEeCCCCCcEEEEEEEEEeCCccCCCcccEEeEcCCCC
Confidence 345789999999999999765432 46778889998754
|
| >1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.58 E-value=0.1 Score=44.87 Aligned_cols=94 Identities=16% Similarity=0.168 Sum_probs=56.0
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|..+++.....+++.|+|.-.....|. ...=.|+|.......... .... ......
T Consensus 30 ~P~~l~~~~~~~~sv~l~W~~p~~~~g~--------i~~Y~v~~~~~~~~~~~~---~~~~-------------~~~~~~ 85 (130)
T 1wfo_A 30 PPMGILFPEVRTTSVRLIWQPPAAPNGI--------ILAYQITHRLNTTTANTA---TVEV-------------LAPSAR 85 (130)
T ss_dssp CCCCCEEEEECSSEEEEECCCCSCCCSC--------CCEEEEEEEESSCCCSCC---CEEE-------------ECTTCC
T ss_pred CCCceEEEecCCCEEEEEEcCCCCCCCc--------eEEEEEEEEECCCCCceE---EEEE-------------eCCCce
Confidence 6777777766689999999754321110 012345665543211000 0000 012235
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCC---CccceEEEEcCCCCC
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIP---AMSAEHVFETLPLPS 194 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~p~~~ 194 (580)
.++|++|+|+|.|.+||...+.. .+|+...|+|.+...
T Consensus 86 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~p 126 (130)
T 1wfo_A 86 QYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEKRSG 126 (130)
T ss_dssp EEEEESCCSSSEEEEEEEEECSSCEEEEEEEEEECCSSCCC
T ss_pred EEEEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEecCCCCC
Confidence 67889999999999999775533 456778899976543
|
| >3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A | Back alignment and structure |
|---|
Probab=95.55 E-value=0.13 Score=48.07 Aligned_cols=96 Identities=17% Similarity=0.160 Sum_probs=55.1
Q ss_pred CCCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCcccccccc
Q 008029 75 SNFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGI 154 (580)
Q Consensus 75 ~~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 154 (580)
...|..+.+.-...+++.|+|.-.....+....+ ...=.|+|............ . ...
T Consensus 5 ~~~P~~l~~~~~~~~si~l~W~~p~~~~~~~~~~----i~~Y~v~~~~~~~~~~~~~~-----~-------------~~~ 62 (211)
T 3p4l_A 5 MMPPVGVQASILSHDTIRITWADNSLPKHQKITD----SRYYTVRWKTNIPANTKYKN-----A-------------NAT 62 (211)
T ss_dssp CCCCEEEEEEECSSSCEEEEEECTTSCTTCCCCS----SCEEEEEEEECC---CCCEE-----E-------------EES
T ss_pred CCCCCCEEEEecCCCeEEEEEeCCCCCcccccCC----CcEEEEEEEECCCCcceEEE-----e-------------CCC
Confidence 3468888887767899999998632110000000 01234666554322111000 0 011
Q ss_pred EEEEEeCCCCCCCEEEEEEEeCCCC---CccceEEEEcCCC
Q 008029 155 IHHVKIDGLDPGTKYYYKCGDSKIP---AMSAEHVFETLPL 192 (580)
Q Consensus 155 ~h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~p~ 192 (580)
...++|++|+|+|.|.+||...+.. .+|....++|.+.
T Consensus 63 ~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~S~~~~~~t~~~ 103 (211)
T 3p4l_A 63 TLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 103 (211)
T ss_dssp SSEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCC
T ss_pred ceEEEecCcCCCCEEEEEEEEEcCCCCCccceeEeeecccC
Confidence 2467789999999999999764422 4677889999764
|
| >2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.51 E-value=0.048 Score=47.08 Aligned_cols=83 Identities=20% Similarity=0.179 Sum_probs=49.7
Q ss_pred CCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEEEEEeCCCCC
Q 008029 86 SSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIHHVKIDGLDP 165 (580)
Q Consensus 86 ~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h~v~l~gL~P 165 (580)
...+++.|+|.-+.. -|. |+ ..=.|+|.......+....- . | +....++|.||+|
T Consensus 19 ~~~~sv~L~W~p~~d-ggs---PI----~~Y~I~yr~~~~~~w~~~~~-------~-~---------~~~~~~~l~~L~p 73 (114)
T 2kbg_A 19 SSGKSFKLSITKQDD-GGA---PI----LEYIVKYRSKDKEDQWLEKK-------V-Q---------GNKDHIILEHLQW 73 (114)
T ss_dssp CSTTCEEEEECCCCC-SSS---CC----SEEEEEEEESSCCSCCEEEE-------E-E---------TTTCCEEECCCCT
T ss_pred cCCCEEEEEEECCCC-CCC---cc----cEEEEEEEeCCCCCcEEeEE-------c-C---------CCcCEEEEcCCCC
Confidence 349999999975321 121 11 23467887764333322110 0 1 1113467999999
Q ss_pred CCEEEEEEEeCCCCCcc--ceEEEEcCCCC
Q 008029 166 GTKYYYKCGDSKIPAMS--AEHVFETLPLP 193 (580)
Q Consensus 166 ~T~Y~Yrvg~~~~~~~S--~~~~F~T~p~~ 193 (580)
++.|.+||...+..+.| ....|+|.+.+
T Consensus 74 ~t~Y~frV~A~N~~G~s~pS~~~~~T~~~~ 103 (114)
T 2kbg_A 74 TMGYEVQITAANRLGYSEPTVYEFSMPPKP 103 (114)
T ss_dssp TCCEEEEEEEECTTSCEEEEEEEECCCCCC
T ss_pred CCEEEEEEEEEeCCcCcCCcCCEEEcCCCC
Confidence 99999999876544443 35689897654
|
| >2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.51 E-value=0.14 Score=43.29 Aligned_cols=39 Identities=23% Similarity=0.172 Sum_probs=29.1
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCC--CCccceEEEEcCCCCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKI--PAMSAEHVFETLPLPS 194 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~--~~~S~~~~F~T~p~~~ 194 (580)
..++|+||+|||.|.++|..... ...+....++|.|.+.
T Consensus 59 t~~~i~gL~PgT~Y~~~V~A~~~~~~~~p~~~~~~T~p~p~ 99 (104)
T 2dle_A 59 PRAVIPGLRSSTFYNITVCPVLGDIEGTPGFLQVHTPPVPS 99 (104)
T ss_dssp SEEECCSCCSSCEEEEEEEEESSSCCCBCEEEEEECCCCSC
T ss_pred CEEEECCCCCCCEEEEEEEEEECCcccCCeeEEEEccCCCC
Confidence 46789999999999999977432 2445577888887553
|
| >2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.49 E-value=0.091 Score=45.26 Aligned_cols=39 Identities=15% Similarity=-0.033 Sum_probs=30.1
Q ss_pred EEEEEeCCCCCCCEEEEEEEeCCC---CCccceEEEEcCCCC
Q 008029 155 IHHVKIDGLDPGTKYYYKCGDSKI---PAMSAEHVFETLPLP 193 (580)
Q Consensus 155 ~h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~ 193 (580)
...++|+||+|+|.|.+||...+. ..+|+...|+|.+..
T Consensus 78 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 119 (134)
T 2edx_A 78 HSSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDEDV 119 (134)
T ss_dssp CSEEEEESCCTTCEEEEEEEEEETTBCCCCCCCEEEECCCCS
T ss_pred ccEEEeCCCCCCCEEEEEEEEEcCCCcCCCCCCEEeecCCCC
Confidence 356789999999999999966432 257888899997644
|
| >2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.41 E-value=0.074 Score=45.64 Aligned_cols=96 Identities=17% Similarity=0.166 Sum_probs=54.1
Q ss_pred CCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCC-cce-EEeeEEEEEeeecccCCccccccc
Q 008029 76 NFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGK-YTS-KRGGNATVYSQLYPFKGLLNYTSG 153 (580)
Q Consensus 76 ~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~-~~~-~a~g~~~~y~~~~p~~g~~~~~~~ 153 (580)
..|.+++++-...+++.|+|.-.... + ..=.|+|....+. ... .-.+.... ... ++
T Consensus 10 p~p~~L~v~~~T~~Si~LsW~~p~g~-------v----~~Y~i~y~~~~~~~~e~~~~~~~~~~-~~v----------~~ 67 (112)
T 2cui_A 10 PRLSQLSVTDVTTSSLRLNWEAPPGA-------F----DSFLLRFGVPSPSTLEPHPRPLLQRE-LMV----------PG 67 (112)
T ss_dssp CCCCCCEEESCCSSCEEEECCCCTTS-------C----SEEEEEEECCCCSSSCCCSSCCCCEE-EEE----------ET
T ss_pred CCCCceEEEeecCCeEEEEECCCCCC-------c----cEEEEEEEeCCCCccccccccCcceE-EEc----------CC
Confidence 45778887766699999999753211 0 2345778754331 000 00000000 000 11
Q ss_pred cEEEEEeCCCCCCCEEEEEEEeCCCCCcc--ceEEEEcCCCC
Q 008029 154 IIHHVKIDGLDPGTKYYYKCGDSKIPAMS--AEHVFETLPLP 193 (580)
Q Consensus 154 ~~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S--~~~~F~T~p~~ 193 (580)
-...++|+||+|+|.|..+|........| -....+|.+.+
T Consensus 68 ~~t~~~l~gL~PgT~Y~~~V~A~~~~~~s~p~~~~~~T~~~~ 109 (112)
T 2cui_A 68 TRHSAVLRDLRSGTLYSLTLYGLRGPHKADSIQGTARTLSGP 109 (112)
T ss_dssp TCCEEEECSCCTTCEEEEEEEEECSSSEEEEEEEEEECCCCS
T ss_pred CcCEEEeCCCCCCCEEEEEEEEEECCcccCCEEEEEEECCCC
Confidence 22468899999999999999775533444 34567776644
|
| >2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.39 E-value=0.078 Score=44.27 Aligned_cols=90 Identities=22% Similarity=0.274 Sum_probs=52.4
Q ss_pred CCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccE
Q 008029 76 NFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGII 155 (580)
Q Consensus 76 ~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 155 (580)
..|..+++.-...+++.|+|.-.. + ...=.|+|........... .. .. .++.
T Consensus 10 ~~P~~l~~~~~~~~sv~lsW~~p~---~---------~~~Y~v~y~~~~~~~~~~~--~~---~~----------~~~~- 61 (104)
T 2dkm_A 10 PPPRALTLAAVTPRTVHLTWQPSA---G---------ATHYLVRCSPASPKGEEEE--RE---VQ----------VGRP- 61 (104)
T ss_dssp CCCCCCEEEEECSSEEEEECCCCS---S---------CSEEEEEEEESSSCCSSCC--EE---EE----------ESSS-
T ss_pred CCCceeEEEecCCCEEEEEEeCCC---C---------CCeEEEEEEECCCCCCcce--EE---Ee----------cCCC-
Confidence 368888877666899999996421 1 0123456654332111000 00 00 0122
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCCCCccc--eEEEEcCCCCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKIPAMSA--EHVFETLPLPS 194 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~p~~~ 194 (580)
.++|+||+|+|.|.++|...+..+.|+ ...++|.|.+.
T Consensus 62 -~~~l~~L~p~t~Y~~~V~A~~~~~~s~p~~~~~~T~p~~~ 101 (104)
T 2dkm_A 62 -EVLLDGLEPGRDYEVSVQSLRGPEGSEARGIRARTPTSGP 101 (104)
T ss_dssp -EEEEESCCTTCCEEEEEEEECSSSBCCCEEEECCCCCCSC
T ss_pred -EEEECCCCCCCEEEEEEEEECCCCCCCCEEEEEEcCCCCC
Confidence 788999999999999998755334443 45677776543
|
| >2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* | Back alignment and structure |
|---|
Probab=95.36 E-value=0.0093 Score=60.90 Aligned_cols=39 Identities=15% Similarity=0.086 Sum_probs=25.1
Q ss_pred eEEEEEcccCCCCCh-HHHHHHHHHCCCCEEEEccccccc
Q 008029 200 HRIAVIGDLGLTSNS-STTVDHLIQNDPSLILMVGDLTYA 238 (580)
Q Consensus 200 ~rfav~gD~g~~~~~-~~~l~~i~~~~pDfvl~~GDl~Y~ 238 (580)
.+++++||+|..... .+.++.+.....+.++++||+++.
T Consensus 50 ~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vflGD~VDR 89 (309)
T 2ie4_C 50 CPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDR 89 (309)
T ss_dssp SSEEEECCCTTCHHHHHHHHHHHCCTTTSCEEECSCCSSS
T ss_pred CCEEEEecCCCCHHHHHHHHHHcCCCCCCEEEEeCCccCC
Confidence 468999999965321 222332222356788999999964
|
| >3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C | Back alignment and structure |
|---|
Probab=95.21 E-value=0.15 Score=42.38 Aligned_cols=90 Identities=19% Similarity=0.148 Sum_probs=52.4
Q ss_pred CCCCceEEEEeCCCCcEEEEEEeCCC--CCCCCCCCCCCCCCCcEEEEcccCCCc--ceEEeeEEEEEeeecccCCcccc
Q 008029 75 SNFPEQIALAISSPTSMWVSWVSGDA--QIGSNVTPLDPSTVASDVWYGKQSGKY--TSKRGGNATVYSQLYPFKGLLNY 150 (580)
Q Consensus 75 ~~~P~qi~la~~~~~sm~V~W~T~~~--~~g~~~~~~~p~~~~~~V~yg~~~~~~--~~~a~g~~~~y~~~~p~~g~~~~ 150 (580)
...|..+.+.--..+++.|+|.-... ..|. ...=.|.|....... ... ..+.. +
T Consensus 5 ~~~P~~~~~~~~s~tsi~v~W~~p~~~~~ng~--------i~gY~v~y~~~~~~~~~~~~----~~~v~------~---- 62 (102)
T 3n1f_C 5 ITGPHIAYTEAVSDTQIMLKWTYIPSSNNNTP--------IQGFYIYYRPTDSDNDSDYK----RDVVE------G---- 62 (102)
T ss_dssp CSCCEEEEEEECSSSCEEEEEECCC-----CC--------CCEEEEEEEETTCCCGGGCE----EEEEE------T----
T ss_pred CCCCceeEEEEcCCCEEEEEeECCChhhcCCc--------cceEEEEEEECCCCCCCceE----EEEEc------C----
Confidence 45688888866668999999986432 1111 012357777654321 110 00000 1
Q ss_pred ccccEEEEEeCCCCCCCEEEEEEEeCCC---CCccceEEEEc
Q 008029 151 TSGIIHHVKIDGLDPGTKYYYKCGDSKI---PAMSAEHVFET 189 (580)
Q Consensus 151 ~~~~~h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T 189 (580)
-..+++|++|+|+|.|.++|..-+. ...|+...++|
T Consensus 63 ---~~~~~~l~~L~p~t~Y~v~V~A~n~~G~G~~S~~~~~~T 101 (102)
T 3n1f_C 63 ---SKQWHMIGHLQPETSYDIKMQCFNEGGESEFSNVMICET 101 (102)
T ss_dssp ---TCSEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEEC
T ss_pred ---CceEEECCCCCCCCEEEEEEEEECCCcCCCCCCCEEeec
Confidence 1124689999999999999965332 24666777776
|
| >2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.19 E-value=0.065 Score=46.58 Aligned_cols=36 Identities=22% Similarity=0.338 Sum_probs=27.6
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCC--CccceEEEEcCCC
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIP--AMSAEHVFETLPL 192 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~--~~S~~~~F~T~p~ 192 (580)
..+|+||+|+|+|.|||...+.. ..|+...++|.+.
T Consensus 81 ~~~v~gL~p~t~Y~frV~A~N~~G~~~S~~v~~~T~~~ 118 (127)
T 2dmk_A 81 HYTVHGLQSGTRYIFIVKAINQAGSRNSEPTRLKTNSQ 118 (127)
T ss_dssp EEEEESCCSSCEEEEEEEEEESSCEEECCCEEEECCSS
T ss_pred eEEECCCCCCCEEEEEEEEEeCCCCCCCcCeEeEeCCC
Confidence 34688999999999999765432 4567888998764
|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A | Back alignment and structure |
|---|
Probab=95.17 E-value=0.3 Score=45.46 Aligned_cols=103 Identities=15% Similarity=0.184 Sum_probs=59.3
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|..+.+.-...+++.|+|.-... .. ...=.|+|........... ... ..-..
T Consensus 25 ~P~~l~~~~~~~~sv~lsW~~p~~---~~-------i~~Y~v~~~~~~~~~~~~~----~~~-------------~~~~~ 77 (203)
T 2gee_A 25 QPTDLSFVDITDSSIGLRWTPLNS---ST-------IIGYRITVVAAGEGIPIFE----DFV-------------DSSVG 77 (203)
T ss_dssp CCEEEEEECCTTTCEEEEEECCSS---SS-------CCEEEEEEEESSSSSCCEE----EEE-------------ETTCC
T ss_pred CCCccEEEecCCCEEEEEecCCCC---CC-------ccEEEEEEEECCCCCCcee----EEc-------------CCCcc
Confidence 577777766668999999986431 00 1233566665443321111 000 01124
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCCCccceEEEEcCCCCCCCCCCeEEEEEcc
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIPAMSAEHVFETLPLPSPTSYPHRIAVIGD 207 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~~~F~T~p~~~~~~~~~rfav~gD 207 (580)
..+|+||+|+|.|.++|...+..+.|....+.|....... ..+++...++
T Consensus 78 ~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~t~~~~p~P-~~l~~~~~~~ 127 (203)
T 2gee_A 78 YYTVTGLEPGIDYDISVYTVKNGGESTPTTLTQQTAVPPP-TDLRFTNIGP 127 (203)
T ss_dssp EEEECSCCTTCEEEEEEEEESSSCBCCCEEEEEECCCCCC-EEEEEEEEET
T ss_pred EEEeCCCCCCCEEEEEEEEEeCCCccccEeeeecCCCcCC-CceEEEEcCC
Confidence 5678999999999999987665566766666665433321 2345444443
|
| >1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.16 E-value=0.095 Score=44.34 Aligned_cols=97 Identities=20% Similarity=0.181 Sum_probs=57.4
Q ss_pred CCCceEEEEeCCCCcEEEEEEeCCC--CCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccc
Q 008029 76 NFPEQIALAISSPTSMWVSWVSGDA--QIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSG 153 (580)
Q Consensus 76 ~~P~qi~la~~~~~sm~V~W~T~~~--~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~ 153 (580)
..|..+++.-...+++.|+|.-... ..|. ...=.|+|.......... +... .. ...+
T Consensus 17 ~~P~~~~~~~~~~~sv~l~W~~p~~~~~~g~--------i~~Y~v~~~~~~~~~~~~-------~~~~----~~--~~~~ 75 (122)
T 1va9_A 17 GPPMDVTLQPVTSQSIQVTWKAPKKELQNGV--------IRGYQIGYRENSPGSNGQ-------YSIV----EM--KATG 75 (122)
T ss_dssp SCCEEEEEEECSSSEEEEEEECCCSSTTCSC--------CCEEEEEEEESSTTSCCS-------CBCC----BC--CCCS
T ss_pred CCCcceEEEeccCCEEEEEEeCCCCcCCCCc--------EeEEEEEEEECCCCCCcc-------eEEE----EE--ecCC
Confidence 3577888766668999999986542 1110 012345665543221100 0000 00 0122
Q ss_pred cEEEEEeCCCCCCCEEEEEEEeCCC---CCccceEEEEcCCCC
Q 008029 154 IIHHVKIDGLDPGTKYYYKCGDSKI---PAMSAEHVFETLPLP 193 (580)
Q Consensus 154 ~~h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~ 193 (580)
-...++|+||+|+|.|.+||...+. ..+|+...|+|.+..
T Consensus 76 ~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 118 (122)
T 1va9_A 76 DSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLESG 118 (122)
T ss_dssp SEEEEEEESCCSSCCEEEEEEEEETTEECCCCCCEECCCCSSC
T ss_pred ceeEEEeCCCCCCCEEEEEEEEEcCCCCCCCccCEEEEeCCCC
Confidence 3477889999999999999966442 257888889987643
|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=95.12 E-value=0.097 Score=47.83 Aligned_cols=89 Identities=20% Similarity=0.155 Sum_probs=51.2
Q ss_pred CCCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCcccccccc
Q 008029 75 SNFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGI 154 (580)
Q Consensus 75 ~~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 154 (580)
...|..+.+.-...+++.|+|.-.. |. ...=.|+|........... .. ++.
T Consensus 95 p~~P~~l~~~~~~~~sv~l~W~~p~---~~--------i~~Y~v~~~~~~~~~~~~~-----~~-------------~~~ 145 (186)
T 1qr4_A 95 VGSPKGISFSDITENSATVSWTPPR---SR--------VDSYRVSYVPITGGTPNVV-----TV-------------DGS 145 (186)
T ss_dssp CCCCSCEEEESCCSSCEEEEECCCS---SC--------CSEEEEEEEETTCCCCEEE-----EE-------------ETT
T ss_pred CCCCCccEEEEeCCCEEEEEEECCC---Cc--------ccEEEEEEEeCCCCCceEE-----Ec-------------CCC
Confidence 3467788776555899999997432 10 1233466765433211110 00 012
Q ss_pred EEEEEeCCCCCCCEEEEEEEeCCCCCccc--eEEEEcCCC
Q 008029 155 IHHVKIDGLDPGTKYYYKCGDSKIPAMSA--EHVFETLPL 192 (580)
Q Consensus 155 ~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~p~ 192 (580)
...++|+||+|+|.|.++|...+..+.|+ ...|+|.|.
T Consensus 146 ~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p~~~~~~T~pd 185 (186)
T 1qr4_A 146 KTRTKLVKLVPGVDYNVNIISVKGFEESEPISGILKTALD 185 (186)
T ss_dssp CCEEEECSCCSSCEEEEEEEEEETTEECCCEEEEEEC---
T ss_pred cCEEEEcCCCCCCEEEEEEEEEcCCCcCcCEEEEEEecCC
Confidence 24577899999999999997654334443 567777764
|
| >2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.12 E-value=0.15 Score=42.60 Aligned_cols=88 Identities=18% Similarity=0.248 Sum_probs=52.3
Q ss_pred CCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccE
Q 008029 76 NFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGII 155 (580)
Q Consensus 76 ~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 155 (580)
..|..+++.--..+++.|+|.-.... + ..=.|+|....+. ... . .. ++-.
T Consensus 9 ~~P~~l~v~~~~~~sv~lsW~~p~~~-------i----~~Y~i~y~~~~~~-~~~-------~-~~----------~~~~ 58 (105)
T 2cum_A 9 EAPRDLEAKEVTPRTALLTWTEPPVR-------P----AGYLLSFHTPGGQ-TQE-------I-LL----------PGGI 58 (105)
T ss_dssp CCCEEEEEESCCSSCEEEEEECCSSC-------C----SEEEEEEECTTSC-EEE-------E-EE----------CSSC
T ss_pred CCCCceEEEeccCCEEEEEEcCCCCc-------c----ceEEEEEEeCCCc-eEE-------E-EE----------CCCc
Confidence 35777777655588999999743211 0 1234677654321 100 0 00 0122
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCCCCc--cceEEEEcCCCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKIPAM--SAEHVFETLPLP 193 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~~~~--S~~~~F~T~p~~ 193 (580)
..++|+||+|+|.|.++|...+..+. +....|+|....
T Consensus 59 ts~~l~~L~p~t~Y~~~V~A~~~~g~s~~~~~~~~T~~~~ 98 (105)
T 2cum_A 59 TSHQLLGLFPSTSYNARLQAMWGQSLLPPVSTSFTTGGLR 98 (105)
T ss_dssp SEEEECSCCTTCEEEEEEEEEBTTBCCCCEEEEEECCCSC
T ss_pred cEEEECCCCCCCEEEEEEEEEeCCcccCCEEEEEEeCCcC
Confidence 46789999999999999977443333 345688886543
|
| >3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic} | Back alignment and structure |
|---|
Probab=95.11 E-value=0.11 Score=42.91 Aligned_cols=80 Identities=20% Similarity=0.234 Sum_probs=46.9
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|..+.++--..+++.|+|...... ...=.|+|......-... .... ++-.-
T Consensus 4 ~P~~l~v~~~t~~Sv~lsW~~p~~~-----------i~~Y~v~y~~~~~~~~~~----~~~~-------------~~~~t 55 (98)
T 3tes_A 4 APKNLVVSEVTEDSLRLSWTAPDAA-----------FDSFMIQYQESEKVGEAI----NLTV-------------PGSER 55 (98)
T ss_dssp CCEEEEEESCCSSCEEEEEECCTTS-----------CSEEEEEEEETTBCSCCE----EEEE-------------ETTCS
T ss_pred CCCceEEEecCCCeEEEEecCCcCc-----------cceEEEEEEECCCCCceE----EEEc-------------CCCcC
Confidence 4777777655599999999854311 012356776643211000 0000 01123
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCCCccce
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIPAMSAE 184 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~ 184 (580)
.++|+||+|+|.|.++|...+..+.|+.
T Consensus 56 ~~~l~gL~P~t~Y~~~V~A~~~~g~S~p 83 (98)
T 3tes_A 56 SYDLTGLKPGTEYTVSIYGVKGGHRSNP 83 (98)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEEBCC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCcccCC
Confidence 5789999999999999977553444443
|
| >1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.00 E-value=0.13 Score=41.28 Aligned_cols=68 Identities=19% Similarity=0.353 Sum_probs=39.8
Q ss_pred CCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccE
Q 008029 76 NFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGII 155 (580)
Q Consensus 76 ~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 155 (580)
..|..+++.-...+++.++|..... ......|....+. ... +. . ..
T Consensus 5 ~~P~~l~~~~~~~~sv~L~W~~~~~-------------~~~i~~Y~v~~~~-~~~--~~------~----------~~-- 50 (88)
T 1k85_A 5 TAPTNLASTAQTTSSITLSWTASTD-------------NVGVTGYDVYNGT-ALA--TT------V----------TG-- 50 (88)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSC-------------CSSEEEEEEEESS-SEE--EE------E----------SS--
T ss_pred CCCCccEEEeccCCEEEEEECCCCC-------------CCCccEEEEEECC-EEE--ee------c----------CC--
Confidence 3577777766568899999975321 1123444432111 000 00 0 01
Q ss_pred EEEEeCCCCCCCEEEEEEEeCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSK 177 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~ 177 (580)
-...+++|+|+++|+|||..-+
T Consensus 51 ~~~~~~~L~~~t~Y~~~V~A~n 72 (88)
T 1k85_A 51 TTATISGLAADTSYTFTVKAKD 72 (88)
T ss_dssp SEEEECCCCSSCEEEEEEEEEE
T ss_pred CEEEeCCCCCCCEEEEEEEEEe
Confidence 1346799999999999997643
|
| >2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.00 E-value=0.18 Score=43.21 Aligned_cols=39 Identities=5% Similarity=-0.114 Sum_probs=30.5
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCC---CCccceEEEEcCCCCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKI---PAMSAEHVFETLPLPS 194 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~~ 194 (580)
..++|++|+|+|.|.+||...+. ..+|+...|+|.+...
T Consensus 79 ~~~~l~~L~p~t~Y~~~V~A~n~~G~Gp~S~~~~~~T~~~~~ 120 (124)
T 2dbj_A 79 SRARISVQVHNATCTVRIAAVTRGGVGPFSDPVKIFIPAHSG 120 (124)
T ss_dssp SCEEEECCCSSSEEEECEEEEESSCBCCCCCCEEEECCCSCC
T ss_pred ceEEecCCCCCCEEEEEEEEECCCccCCCCCCEEEEcCCCCC
Confidence 35678999999999999966432 3578899999987544
|
| >1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.97 E-value=0.13 Score=44.19 Aligned_cols=94 Identities=21% Similarity=0.300 Sum_probs=53.9
Q ss_pred CCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccE
Q 008029 76 NFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGII 155 (580)
Q Consensus 76 ~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 155 (580)
..|..+.+.....+++.|+|....... .......|-..-.... ......... ..+..
T Consensus 20 ~~P~~l~~~~~~~~sv~l~W~~p~~~~----------~~g~i~~Y~v~~~~~~----~~~~~~~~~---------~~~~~ 76 (132)
T 1x5h_A 20 AAPQNLSLEVRNSKSIMIHWQPPAPAT----------QNGQITGYKIRYRKAS----RKSDVTETL---------VSGTQ 76 (132)
T ss_dssp CCCEEEEEECCSSSEEEEEEECCCTTT----------CCSCEEEEBCEEEETT----EEEEEECCB---------CCTTC
T ss_pred CCCeeeEEEeCCCCEEEEEEeCCCCcC----------CCceEeEEEEEEEECC----CCCccEEEE---------eCCCc
Confidence 357778776556899999998643210 0122334433110000 000000000 01233
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCCC---CccceEEEEcCCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKIP---AMSAEHVFETLPL 192 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~p~ 192 (580)
...+|+||+|+|.|.+||...+.. .+|+...|+|.+.
T Consensus 77 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 116 (132)
T 1x5h_A 77 LSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFES 116 (132)
T ss_dssp CEEEEECCCSSCEEEEECEEEETTEEEEECCCEEEECCSS
T ss_pred cEEEeCCCCCCCEEEEEEEEEcCCccCCCCcCEEeEcCcc
Confidence 567889999999999999765432 4788899999774
|
| >3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A | Back alignment and structure |
|---|
Probab=94.95 E-value=0.2 Score=47.75 Aligned_cols=104 Identities=13% Similarity=0.135 Sum_probs=60.9
Q ss_pred CCCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCcccccccc
Q 008029 75 SNFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGI 154 (580)
Q Consensus 75 ~~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 154 (580)
...|..+.+.-...+++.|+|.-.. |. ...=.|+|....+...... ... ..
T Consensus 6 ~~~P~~l~~~~~~~~si~l~W~~p~---g~--------i~~Y~v~~~~~~~~~~~~~-----~~~-------------~~ 56 (234)
T 3f7q_A 6 LGAPQNPNAKAAGSRKIHFNWLPPS---GK--------PMGYRVKYWIQGDSESEAH-----LLD-------------SK 56 (234)
T ss_dssp CCCCEEEEEEECSSSCEEEEEECCS---SC--------CCEEEEEEEETTSCGGGCE-----EEE-------------ES
T ss_pred CCCCcceEEEEcCCCEEEEEEECCC---Cc--------cceEEEEEEECCCCccceE-----EEc-------------CC
Confidence 3568888887767899999998542 11 0233566765433221110 000 11
Q ss_pred EEEEEeCCCCCCCEEEEEEEeCCC---CCccceEEEEcCCCCCCCCCCeEEEEEcc
Q 008029 155 IHHVKIDGLDPGTKYYYKCGDSKI---PAMSAEHVFETLPLPSPTSYPHRIAVIGD 207 (580)
Q Consensus 155 ~h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~~~~~~~~rfav~gD 207 (580)
...++|+||+|+|.|.++|...+. ..+|....++|..........+++...++
T Consensus 57 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~~~~~T~~~~P~~P~~l~~~~~~~ 112 (234)
T 3f7q_A 57 VPSVELTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQEVPSEPGRLAFNVVSS 112 (234)
T ss_dssp SSEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCCCCCCCCCCEEEECSS
T ss_pred ccEEEECCCCCCCEEEEEEEEEeCCCcCCCCCeEEEEcCCCCCCCCCccEEEEecC
Confidence 245678999999999999965432 24677888988753322112345544443
|
| >1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=94.94 E-value=0.015 Score=59.81 Aligned_cols=39 Identities=15% Similarity=0.049 Sum_probs=25.1
Q ss_pred eEEEEEcccCCCCCh-HHHHHHHHHCCCCEEEEccccccc
Q 008029 200 HRIAVIGDLGLTSNS-STTVDHLIQNDPSLILMVGDLTYA 238 (580)
Q Consensus 200 ~rfav~gD~g~~~~~-~~~l~~i~~~~pDfvl~~GDl~Y~ 238 (580)
.++.++||+|..... .+.++.+.....|-++++||+++.
T Consensus 57 ~~i~viGDIHG~~~~L~~ll~~~g~~~~~~~vflGD~VDR 96 (330)
T 1fjm_A 57 APLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDR 96 (330)
T ss_dssp SSEEEECBCTTCHHHHHHHHHHHCSTTSSCEEECSCCSSS
T ss_pred CceEEecCCCCCHHHHHHHHHHhCCCCcceEEeCCCcCCC
Confidence 368999999976321 222333222345789999999964
|
| >2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.90 E-value=0.15 Score=43.04 Aligned_cols=38 Identities=18% Similarity=0.077 Sum_probs=29.6
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCC---CCccceEEEEcCCCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKI---PAMSAEHVFETLPLP 193 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~ 193 (580)
..+.|++|+|+|.|.+||...+. ..+|+...|+|.+..
T Consensus 76 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 116 (121)
T 2dlh_A 76 QITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQTGS 116 (121)
T ss_dssp SEECCBSCCSSCEEEEEEEEEESSCBCCCCCCEEEECCCCC
T ss_pred eEEEecCCCCCCEEEEEEEEEeCCccCCCCCCEEEECCCCC
Confidence 45689999999999999966432 257888999997644
|
| >2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A | Back alignment and structure |
|---|
Probab=94.90 E-value=0.017 Score=59.77 Aligned_cols=24 Identities=21% Similarity=0.512 Sum_probs=19.6
Q ss_pred HHHHHHHHhcCCcEEEEccccCce
Q 008029 392 QEMEALLYQYGVDIVFSGHVHAYE 415 (580)
Q Consensus 392 ~~l~~Ll~ky~VdlvlsGH~H~ye 415 (580)
+.+..++..++.++++.||+|.-+
T Consensus 268 ~~~~~fl~~~~~~~IV~GHt~~~~ 291 (342)
T 2z72_A 268 AELDTILQHFNVNHIVVGHTSQER 291 (342)
T ss_dssp HHHHHHHHHHTCSEEEECSSCCSS
T ss_pred HHHHHHHHHCCCcEEEECCCcccc
Confidence 456677888899999999999743
|
| >2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.87 E-value=0.086 Score=45.34 Aligned_cols=38 Identities=32% Similarity=0.375 Sum_probs=29.7
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCC---CCccceEEEEcCCCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKI---PAMSAEHVFETLPLP 193 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~ 193 (580)
..++|++|+|+|+|.+||...+. ..+|+...|+|.|..
T Consensus 67 ~~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~t~~~~ 107 (122)
T 2e3v_A 67 GIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVR 107 (122)
T ss_dssp TEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCCC
T ss_pred ceEEeCCCCCCCEEEEEEEEEeCCccCCCcccccccccCCC
Confidence 45678999999999999976442 257788888887754
|
| >2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.78 E-value=0.042 Score=46.47 Aligned_cols=38 Identities=18% Similarity=0.183 Sum_probs=30.1
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCC---CccceEEEEcCCCCC
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIP---AMSAEHVFETLPLPS 194 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~p~~~ 194 (580)
..+|+||+|+|.|.|||...+.. .+|+...++|.+.+.
T Consensus 66 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~p~ 106 (110)
T 2db8_A 66 MCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSEGSG 106 (110)
T ss_dssp CEEEECCCSSSCCEEEEEEECSSCBCCCCSCEECCCCCCCC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCcCCCCCCCEEEEcCCCCC
Confidence 35678999999999999765532 577889999987654
|
| >2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.67 E-value=0.14 Score=43.45 Aligned_cols=87 Identities=14% Similarity=0.040 Sum_probs=50.3
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|..+++.--..+++.|+|.-.... ...=.|+|........ .. . . .+-..
T Consensus 10 ~P~~l~~~~~t~~sv~lsW~~p~~~-----------i~~Y~v~y~~~~~~~~-~~-----~---v----------~~~~t 59 (115)
T 2cuh_A 10 GPTQLRALNLTEGFAVLHWKPPQNP-----------VDTYDIQVTAPGAPPL-QA-----E---T----------PGSAV 59 (115)
T ss_dssp SCEEEECCCCSSSCEEEEEECCSSC-----------CSEEEEEEECSSSCCE-EE-----E---E----------ETTCS
T ss_pred CCcceEEEeccCCeEEEEEECCCCC-----------ccEEEEEEEcCCCCcE-EE-----E---E----------CCCcc
Confidence 5676666544489999999753211 0123467765332110 00 0 0 01224
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCCC--ccceEEEEcCCCC
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIPA--MSAEHVFETLPLP 193 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~~--~S~~~~F~T~p~~ 193 (580)
.++|+||+|+|.|.++|......+ ......|+|.+.+
T Consensus 60 ~~~l~~L~P~t~Y~~~V~A~~~~~~s~~~~~~~~T~~~~ 98 (115)
T 2cuh_A 60 DYPLHDLVLHTNYTATVRGLRGPNLTSPASITFTTGLEA 98 (115)
T ss_dssp EEEECSCCSSSEEEEEEEEEETTEECCCEEEEEESCCCC
T ss_pred EEEEeCCCCCCEEEEEEEEEeCCCcCCCEEEEEEeCCCC
Confidence 678999999999999997644322 2345678887543
|
| >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.58 E-value=0.23 Score=45.12 Aligned_cols=76 Identities=21% Similarity=0.210 Sum_probs=45.7
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|..+++.-...+++.|+|.......|.. ...=.|+|............-. ....
T Consensus 8 ~P~~l~~~~~~~~sv~l~W~~p~~~~~~~-------i~~Y~v~~~~~~~~~~~~~~~~------------------~~~~ 62 (197)
T 3lpw_A 8 PPQDLKVKEVTKTSVTLTWDPPLLDGGSK-------IKNYIVEKRESTRKAYSTVATN------------------CHKT 62 (197)
T ss_dssp CCEEEEEEEECSSCEEEEEECCSCCTTSC-------CCEEEEEEEETTCSSCEEEEEE------------------ECSS
T ss_pred CCCCcEEEEecCCEEEEEEcCCccCCCCc-------ccEEEEEEEECCCCccEEeecC------------------CCcc
Confidence 57777776555899999998753221110 1223566666543332221100 0114
Q ss_pred EEEeCCCCCCCEEEEEEEeCC
Q 008029 157 HVKIDGLDPGTKYYYKCGDSK 177 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~ 177 (580)
...+++|+|+|.|.|||...+
T Consensus 63 ~~~~~~L~p~t~Y~~~V~a~~ 83 (197)
T 3lpw_A 63 SWKVDQLQEGCSYYFRVLAEN 83 (197)
T ss_dssp EEEECCCCTTCEEEEEEEEEE
T ss_pred EEEEcCCCCCCEEEEEEEEEc
Confidence 567899999999999997654
|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A | Back alignment and structure |
|---|
Probab=94.58 E-value=0.24 Score=46.09 Aligned_cols=94 Identities=19% Similarity=0.182 Sum_probs=54.3
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|..+.+..... ++.|+|.-.....|..+ ..=.|+|.......+.... +... ..+...
T Consensus 11 ~P~~~~~~~~~~-s~~l~W~~p~~~~g~~i-------~~Y~v~~~~~~~~~~~~~~-----~~~~---------~~~~~~ 68 (209)
T 2vkw_A 11 SPSIDQVEPYSS-TAQVQFDEPEATGGVPI-------LKYKAEWRAVGEEVWHSKW-----YDAK---------EASMEG 68 (209)
T ss_dssp CCEEEEEEECSS-CEEEEEECCSCCCSSCC-------CEEEEEEEESSCCCCEEEE-----EEHH---------HHHHHS
T ss_pred CCcccEeeeccC-eEEEEEcCCCcCCCcce-------eEEEEEEeeCCCCCceEeE-----eecc---------CCCccc
Confidence 488887765545 69999986532222111 2334677655433222110 0000 001124
Q ss_pred EEEeCCCCCCCEEEEEEEeCCC---CCccceEEEEcCCC
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKI---PAMSAEHVFETLPL 192 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~ 192 (580)
..+|++|+|+|.|.|||...+. ..+|....|+|.+.
T Consensus 69 ~~~i~~L~p~t~Y~~~V~A~n~~G~~~~s~~~~~~T~~~ 107 (209)
T 2vkw_A 69 IVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPV 107 (209)
T ss_dssp EEEECCCCTTCEEEEEEEEEETTEECCCCCCEEEECCCS
T ss_pred eEEeCCCCCCCeEEEEEEEEcCCcccCCcccccccccCC
Confidence 5778999999999999966432 24677788999765
|
| >1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.53 E-value=0.24 Score=40.05 Aligned_cols=86 Identities=20% Similarity=0.264 Sum_probs=49.1
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|..+++.--..+++.|+|.-.. |. ...=.|+|....+. ..... .. .++-..
T Consensus 4 ~P~~l~~~~~~~~si~lsW~~p~---~~--------i~~Y~v~y~~~~~~-------~~~~~----~~------~~~~~~ 55 (94)
T 1j8k_A 4 RPKGLAFTDVDVDSIKIAWESPQ---GQ--------VSRYRVTYSSPEDG-------IHELF----PA------PDGEED 55 (94)
T ss_dssp CCCCCEEEEEETTEEEEECCCCS---SC--------CSCEEEEEEETTTE-------EEEEC----CC------CCSSCC
T ss_pred CCCccEEEeecCCEEEEEEcCCC---CC--------cceEEEEEEeCCCC-------CceEE----ec------CCCCcc
Confidence 47777776545899999995432 11 01234667554321 10000 00 011235
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCCCccc--eEEEEcC
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIPAMSA--EHVFETL 190 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~ 190 (580)
.++|+||+|+|.|.++|..-+..+.|. ...++|.
T Consensus 56 ~~~l~~L~p~t~Y~~~V~A~~~~g~s~p~~~~~~T~ 91 (94)
T 1j8k_A 56 TAELQGLRPGSEYTVSVVALHDDMESQPLIGTQSTA 91 (94)
T ss_dssp EEEECSCCCCSEEEEEEEECSSSCCCCCEEEEEECC
T ss_pred EEEeCCCCCCCEEEEEEEEEcCCCcCCCEEeEEEec
Confidence 678999999999999998866444443 3455554
|
| >1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.47 E-value=0.19 Score=43.11 Aligned_cols=95 Identities=15% Similarity=0.080 Sum_probs=53.1
Q ss_pred CCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEccc---CCCcceEEeeEEEEEeeecccCCcccccc
Q 008029 76 NFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQ---SGKYTSKRGGNATVYSQLYPFKGLLNYTS 152 (580)
Q Consensus 76 ~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~---~~~~~~~a~g~~~~y~~~~p~~g~~~~~~ 152 (580)
..|..+.+.--..+++.|+|.-.. .-|..+ ..=.|+|... ....+..+. ... . .
T Consensus 19 ~~P~~l~~~~~~~~sv~l~W~p~~-~~~~~i-------~~Y~v~~~~~~~~~~~~w~~~~------~~~--~-------~ 75 (124)
T 1wis_A 19 GPPTNLGISNIGPRSVTLQFRPGY-DGKTSI-------SRWLVEAQVGVVGEGEEWLLIH------QLS--N-------E 75 (124)
T ss_dssp CCCEEEEEESCCSSCEEEEEECCC-CCSSCC-------SEEEEEECBSCCSTTSCCEEEE------EEE--S-------C
T ss_pred ccCCCCEEEEecCCEEEEEEECCC-CCCCcc-------cEEEEEEEECCCCCCCCCeEee------eEc--c-------C
Confidence 357777776555899999995332 111111 2345677662 222222110 000 0 0
Q ss_pred ccEEEEEeCCCCCCCEEEEEEEeCCCCC---ccce-EEEEcCCCC
Q 008029 153 GIIHHVKIDGLDPGTKYYYKCGDSKIPA---MSAE-HVFETLPLP 193 (580)
Q Consensus 153 ~~~h~v~l~gL~P~T~Y~Yrvg~~~~~~---~S~~-~~F~T~p~~ 193 (580)
.....++|++|+|+|.|.|||...+..+ .|.. ..++|.+.+
T Consensus 76 ~~~~~~~v~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~~T~~~~ 120 (124)
T 1wis_A 76 PDARSMEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQSG 120 (124)
T ss_dssp TTCSEEEECSCCTTSEECCCCEEECSSCBCCCCCCCCCEECCCSS
T ss_pred CCceEEEeCCCCCCCEEEEEEEEEECCccCCCcCCccceEcCCCC
Confidence 1224678899999999999997765433 3432 457776654
|
| >2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.46 E-value=0.41 Score=39.35 Aligned_cols=84 Identities=12% Similarity=0.225 Sum_probs=48.3
Q ss_pred EEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEEEEEe
Q 008029 81 IALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIHHVKI 160 (580)
Q Consensus 81 i~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h~v~l 160 (580)
+.|.....+++.|+|.-.....|. ...=.|+|........... .. .......+|
T Consensus 13 ~~v~~~~~~sv~l~W~~p~~~~g~--------i~~Y~v~~~~~~~~~~~~~-----~~-------------~~~~~~~~i 66 (107)
T 2dn7_A 13 MMISTTAMNTALLQWHPPKELPGE--------LLGYRLQYCRADEARPNTI-----DF-------------GKDDQHFTV 66 (107)
T ss_dssp EEEEECSTTEEEEEEECCSSCSSC--------CCEEEEEEEETTCSSCEEE-----EE-------------ETTCCEEEE
T ss_pred EeEEecCCCEEEEEECCCCCCCCc--------eeEEEEEEEECCCCCCEEE-----Ee-------------CCCccEEEe
Confidence 555555688999999864321110 1233567765543322211 00 011245678
Q ss_pred CCCCCCCEEEEEEEeCCCCC---ccceEEEEcCC
Q 008029 161 DGLDPGTKYYYKCGDSKIPA---MSAEHVFETLP 191 (580)
Q Consensus 161 ~gL~P~T~Y~Yrvg~~~~~~---~S~~~~F~T~p 191 (580)
++|+|+|.|.+||...+..+ +|. ..|+|..
T Consensus 67 ~~L~p~t~Y~~~V~A~n~~G~g~~s~-~~~~T~~ 99 (107)
T 2dn7_A 67 TGLHKGTTYIFRLAAKNRAGLGEEFE-KEIRTPE 99 (107)
T ss_dssp ECCCTTCEEEEEEEEEETTEEEEEEE-EEEECCC
T ss_pred CCCCCCCEEEEEEEEEcCCcccCCee-eEEeCCC
Confidence 99999999999997755333 344 4677754
|
| >2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.43 E-value=0.12 Score=44.00 Aligned_cols=81 Identities=10% Similarity=0.101 Sum_probs=47.0
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|..+.+.-...+++.|+|.-....-|..+ ..=.|+|.......+..+.. . ....
T Consensus 20 ~P~~l~~~~~~~~sv~l~W~~p~~~gg~~i-------~~Y~v~~~~~~~~~w~~~~~-----------~-------~~~~ 74 (120)
T 2yux_A 20 PPQIVKIEDVWGENVALTWTPPKDDGNAAI-------TGYTIQKADKKSMEWFTVIE-----------H-------YHRT 74 (120)
T ss_dssp CCSCEEEEEEETTEEEEEECCCSCCCSSCC-------CCCCEEEEETTTCCCEEEES-----------S-------CCSS
T ss_pred cCCCCEEEEecCCEEEEEEcCCCcCCCCCc-------eEEEEEEEECCCCceEEeee-----------c-------CCcC
Confidence 577777654448899999976432111111 22357776654332222110 0 0112
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCCCcc
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIPAMS 182 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~~~S 182 (580)
.++|++|+|++.|.|||...+..+.+
T Consensus 75 ~~~v~~L~p~t~Y~frV~A~n~~G~s 100 (120)
T 2yux_A 75 SATITELVIGNEYYFRVFSENMCGLS 100 (120)
T ss_dssp CCEECCCCSSEEEEEEECCCSSSCSC
T ss_pred EEEECCCCCCCEEEEEEEEeeCCcCC
Confidence 35789999999999999876644444
|
| >1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.40 E-value=0.17 Score=43.06 Aligned_cols=78 Identities=22% Similarity=0.327 Sum_probs=44.9
Q ss_pred CCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccC-CCcceEEeeEEEEEeeecccCCcccccccc
Q 008029 76 NFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQS-GKYTSKRGGNATVYSQLYPFKGLLNYTSGI 154 (580)
Q Consensus 76 ~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~-~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 154 (580)
..|..+.+.-...+++.|+|.-. .. +.. | ...=.|+|.... ...+..+. . .. .+.
T Consensus 19 ~~P~~~~~~~~~~~sv~l~W~p~-~~-~~~--~----i~~Y~v~~~~~~~~~~w~~~~-~------~~---------~~~ 74 (121)
T 1x4z_A 19 EAPDRPTISTASETSVYVTWIPR-GN-GGF--P----IQSFRVEYKKLKKVGDWILAT-S------AI---------PPS 74 (121)
T ss_dssp CCCCCCEEEECCSSEEEEECCCC-CC-TTS--C----CCEEEEEEEESSSCCCCEEEE-E------EE---------CTT
T ss_pred ccCCCCEEEEccCCEEEEEEECC-CC-CCC--c----ceEEEEEEEECCCCCceEEee-c------cc---------CCC
Confidence 35777777665688999999832 11 110 0 023356776654 22222111 0 00 112
Q ss_pred EEEEEeCCCCCCCEEEEEEEeCC
Q 008029 155 IHHVKIDGLDPGTKYYYKCGDSK 177 (580)
Q Consensus 155 ~h~v~l~gL~P~T~Y~Yrvg~~~ 177 (580)
...++|++|+|+|+|.|||...+
T Consensus 75 ~~~~~v~~L~p~t~Y~frV~A~n 97 (121)
T 1x4z_A 75 RLSVEITGLEKGISYKFRVRALN 97 (121)
T ss_dssp CCEEEEESCCTTCEEEEEEEEEE
T ss_pred cCEEEECCCCCCCEEEEEEEEEc
Confidence 24567899999999999997655
|
| >1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.31 E-value=0.13 Score=43.55 Aligned_cols=37 Identities=19% Similarity=0.246 Sum_probs=28.7
Q ss_pred EEEeCCCCCCCEEEEEEEeCCC---CCccceEEEEcCCCC
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKI---PAMSAEHVFETLPLP 193 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~ 193 (580)
.++|++|+|+|.|.|||...+. ..+|+...|+|.+.+
T Consensus 74 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~ 113 (118)
T 1x3d_A 74 QFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTSGCS 113 (118)
T ss_dssp EEEEESCCTTCEEEEECCEEESSCBCCCCCCEEEECSCCC
T ss_pred EEEeCCCCCCCEEEEEEEEEECCCCCCCccCEEEEcCCCC
Confidence 4578999999999999966442 357788889997654
|
| >2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.28 E-value=0.076 Score=45.17 Aligned_cols=37 Identities=22% Similarity=0.188 Sum_probs=28.1
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCC---CccceEEEEcCCCC
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIP---AMSAEHVFETLPLP 193 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~p~~ 193 (580)
+.+|++|+|+|.|.|||...+.. .+|+...++|.+.+
T Consensus 76 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~ 115 (120)
T 2crm_A 76 EHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQTPAVS 115 (120)
T ss_dssp EEEECSCCTTSCEEEEEEEEETTEECCCCCCCCCCCCCCS
T ss_pred EEEECCCCCCCEEEEEEEEEcCCccCCCcccEEEEcCCCC
Confidence 45789999999999999765432 46777788887544
|
| >3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* | Back alignment and structure |
|---|
Probab=94.25 E-value=0.028 Score=57.07 Aligned_cols=22 Identities=14% Similarity=0.274 Sum_probs=19.1
Q ss_pred HHHHHHHHHhcCCcEEEEcccc
Q 008029 391 RQEMEALLYQYGVDIVFSGHVH 412 (580)
Q Consensus 391 r~~l~~Ll~ky~VdlvlsGH~H 412 (580)
.+.+.+.++++++++++=||.=
T Consensus 228 ~~~~~~fl~~n~l~~IiR~Hq~ 249 (299)
T 3e7a_A 228 AEVVAKFLHKHDLDLICRAHQV 249 (299)
T ss_dssp HHHHHHHHHHHTCSEEEECCSC
T ss_pred HHHHHHHHHHCCCeEEEEcCee
Confidence 3578889999999999999984
|
| >2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.06 E-value=0.14 Score=42.75 Aligned_cols=79 Identities=11% Similarity=0.070 Sum_probs=43.4
Q ss_pred CCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccE
Q 008029 76 NFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGII 155 (580)
Q Consensus 76 ~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 155 (580)
..|..+.+.-...+++.|+|.-....-|..+ ..=.|+|.......+..+. . . ....
T Consensus 9 ~~P~~l~~~~~~~~sv~l~W~~p~~~g~~~i-------~~Y~v~~~~~~~~~w~~~~----------~-~------~~~~ 64 (110)
T 2yuw_A 9 SPPTLLTVDSVTDTTVTMRWRPPDHIGAAGL-------DGYVLEYCFEGTEDWIVAN----------K-D------LIDK 64 (110)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSSCCSSCE-------EEEEEEEEETTCSSEEECC----------S-S------CCCS
T ss_pred CCCCccEEEeccCCeEEEEECCCCCCCCCCc-------cEEEEEEEECCCccceEec----------c-c------cCcc
Confidence 3577777765558899999986432111000 1123455443322111110 0 0 0112
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKI 178 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~ 178 (580)
...+|++|+|++.|.|||...+.
T Consensus 65 ~~~~v~~L~p~t~Y~frV~A~n~ 87 (110)
T 2yuw_A 65 TKFTITGLPTDAKIFVRVKAVNA 87 (110)
T ss_dssp SEEEECSCCTTCEEEEEEEEEET
T ss_pred CEEEECCCCCCCEEEEEEEEEcC
Confidence 35678999999999999977553
|
| >1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.98 E-value=0.39 Score=40.22 Aligned_cols=88 Identities=13% Similarity=0.052 Sum_probs=53.0
Q ss_pred CCCceEEEEeC-C-CCcEEEEEEeCCC---CCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCcccc
Q 008029 76 NFPEQIALAIS-S-PTSMWVSWVSGDA---QIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNY 150 (580)
Q Consensus 76 ~~P~qi~la~~-~-~~sm~V~W~T~~~---~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~ 150 (580)
..|..+.+... + .+++.|+|..... ..+ ....=.|+|....+.....+. + .
T Consensus 9 ~pP~~l~v~~~~~~~~~l~lsW~~P~~w~~~~~--------~~l~Y~v~y~~~~~~~w~~~~----------~--~---- 64 (109)
T 1uc6_A 9 DPPENVVARPVPSNPRRLEVTWQTPSTWPDPES--------FPLKFFLRYRPLILDQWQHVE----------L--S---- 64 (109)
T ss_dssp CCCEEEEEEECTTCTTCEEEEEECCTTCCCTTT--------TTBCEEEEEEESSSCCCCCEE----------E--S----
T ss_pred CCCcceEEEEcCCCCCEEEEEECCCCCccCCCc--------EEEEEEEEEEECCCCCcEEEe----------c--c----
Confidence 46888888764 3 7899999986532 001 012456788776543221110 0 0
Q ss_pred ccccEEEEEeCCCCCCCEEEEEEEeCCC-----CCccceEEEEcC
Q 008029 151 TSGIIHHVKIDGLDPGTKYYYKCGDSKI-----PAMSAEHVFETL 190 (580)
Q Consensus 151 ~~~~~h~v~l~gL~P~T~Y~Yrvg~~~~-----~~~S~~~~F~T~ 190 (580)
.-..+.|.+|+|||.|..||..... ..||+...++|-
T Consensus 65 ---~~~~~~l~~L~p~t~Y~~~VRa~~~g~g~wS~WS~~~~~~~~ 106 (109)
T 1uc6_A 65 ---NGTAHTITDAYAGKEYIIQVAAKDNEIGTWSDWSVAAHATPW 106 (109)
T ss_dssp ---SCSEEEETTCCSSSCEEEEEECCBSSSCCCCCCCEEEEECCC
T ss_pred ---cCCEEEEeCCCCCCEEEEEEEEEeCCCCCcCcCCCCeeeeec
Confidence 0134578999999999999976532 145666666543
|
| >3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A | Back alignment and structure |
|---|
Probab=93.96 E-value=0.041 Score=56.17 Aligned_cols=23 Identities=17% Similarity=0.247 Sum_probs=19.5
Q ss_pred HHHHHHHHHhcCCcEEEEccccC
Q 008029 391 RQEMEALLYQYGVDIVFSGHVHA 413 (580)
Q Consensus 391 r~~l~~Ll~ky~VdlvlsGH~H~ 413 (580)
.+...+.++++++++++=||.-.
T Consensus 233 ~~~~~~fl~~n~l~~iiR~Hq~~ 255 (315)
T 3h63_A 233 PDVTKAFLEENNLDYIIRSHEVK 255 (315)
T ss_dssp HHHHHHHHHHHTCSEEEECCSCC
T ss_pred HHHHHHHHHHcCCcEEEEeceee
Confidence 35778889999999999999864
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=93.87 E-value=0.064 Score=57.74 Aligned_cols=25 Identities=20% Similarity=0.244 Sum_probs=20.8
Q ss_pred HHHHHHHHhcCCcEEEEccccCcee
Q 008029 392 QEMEALLYQYGVDIVFSGHVHAYER 416 (580)
Q Consensus 392 ~~l~~Ll~ky~VdlvlsGH~H~yeR 416 (580)
+.+..+++++++++++.||.+.-+-
T Consensus 387 ~~~~~fl~~~~~~~iir~H~~~~~g 411 (477)
T 1wao_1 387 DVTKAFLEENNLDYIIRSHEVKAEG 411 (477)
T ss_dssp HHHHHHHHHTTCCEEEECCSCCTEE
T ss_pred HHHHHHHHHcCCeEEEECCCCCcCC
Confidence 4677889999999999999987543
|
| >3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=93.85 E-value=0.055 Score=55.70 Aligned_cols=23 Identities=13% Similarity=0.183 Sum_probs=19.9
Q ss_pred HHHHHHHHHhcCCcEEEEccccC
Q 008029 391 RQEMEALLYQYGVDIVFSGHVHA 413 (580)
Q Consensus 391 r~~l~~Ll~ky~VdlvlsGH~H~ 413 (580)
.+.....++++++++++=||.-.
T Consensus 237 ~~~~~~fl~~n~l~~IiR~Hq~~ 259 (335)
T 3icf_A 237 PDITDRFLRNNKLRKIFRSHELR 259 (335)
T ss_dssp HHHHHHHHHHTTCSEEEECSSCC
T ss_pred HHHHHHHHHHCCCeEEEEcCcee
Confidence 35778899999999999999865
|
| >1oww_A FN, fibronectin first type III module, CIG; fibronectin type III module, structural protein; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.80 E-value=0.28 Score=40.47 Aligned_cols=87 Identities=16% Similarity=0.211 Sum_probs=53.9
Q ss_pred CCCCceEEEEeCC--CCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCC-cceEEeeEEEEEeeecccCCccccc
Q 008029 75 SNFPEQIALAISS--PTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGK-YTSKRGGNATVYSQLYPFKGLLNYT 151 (580)
Q Consensus 75 ~~~P~qi~la~~~--~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~-~~~~a~g~~~~y~~~~p~~g~~~~~ 151 (580)
...|-|+.++-+. +++-.|.|...... |+ ..-.+.|...... .+..+. .
T Consensus 5 ~~gpa~v~is~~~s~pdsh~iqW~~~s~s------~I----~eyiL~~R~k~~~g~Wke~~------------------I 56 (98)
T 1oww_A 5 SSGPVEVFITETPSQPNSHPIQWNAPQPS------HI----SKYILRWRPKNSVGRWKEAT------------------I 56 (98)
T ss_dssp -CCCCEEECCCCSSCTTCEEEEEECCSSS------CE----EEEEEEEEETTCSSCCEEEE------------------E
T ss_pred CCcceEEEecCCCCCCCccceEEecCCCC------Cc----eEEEEEEEEcCCCCceeEEE------------------e
Confidence 3468888887766 99999999985421 11 1223344443321 111110 1
Q ss_pred cccEEEEEeCCCCCCCEEEEEEEeCCCCCccc--eEEEEc
Q 008029 152 SGIIHHVKIDGLDPGTKYYYKCGDSKIPAMSA--EHVFET 189 (580)
Q Consensus 152 ~~~~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T 189 (580)
++.+..-+|+||+||..|.=+|-+...-+|++ .+.|.|
T Consensus 57 p~h~nSYtI~GL~P~~~YE~qv~S~~ryG~~Evs~f~FtT 96 (98)
T 1oww_A 57 PGHLNSYTIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTT 96 (98)
T ss_dssp CSSCCEEEECSCCSSEEEEEEEEEEESSSCEEEEEEEEEE
T ss_pred cCccceEEEecCCCCcEEEEEEEEeeccCcccceEEEEEe
Confidence 23455668999999999999998766557766 466665
|
| >1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.79 E-value=0.16 Score=42.66 Aligned_cols=37 Identities=19% Similarity=0.160 Sum_probs=25.3
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCCC---ccceEE-EEcCCCC
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIPA---MSAEHV-FETLPLP 193 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~~---~S~~~~-F~T~p~~ 193 (580)
.++|++|+|+|.|.|||...+..+ +|..-. ++|.+.+
T Consensus 73 ~~~i~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~v~t~~~~ 113 (117)
T 1uem_A 73 LYTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQDSG 113 (117)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEEEEECCCCCCEECCCSS
T ss_pred EEEECCCCCCCEEEEEEEEECCCccCCCcCCCccEEccCCC
Confidence 467899999999999997754332 344333 6666543
|
| >3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A | Back alignment and structure |
|---|
Probab=93.72 E-value=0.3 Score=40.40 Aligned_cols=74 Identities=23% Similarity=0.376 Sum_probs=44.2
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCC-cceEEeeEEEEEeeecccCCccccccccE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGK-YTSKRGGNATVYSQLYPFKGLLNYTSGII 155 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~-~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 155 (580)
.|..+++.--..+++.|+|.-... .|. ...=.|+|...... ..... . .+ +-.
T Consensus 7 ~P~~l~v~~~t~~Sv~l~W~~p~~-~~~--------i~~Y~v~y~~~~~~~~~~~~-----~----v~---------~~~ 59 (101)
T 3k2m_C 7 VPTKLEVVAATPTSLLISWDAPMS-SSS--------VYYYRITYGETGGNSPVQEF-----T----VP---------YSS 59 (101)
T ss_dssp SSCEEEEEEEETTEEEEEECCCCT-TSC--------CCEEEEEEEETTCSSCCEEE-----E----EE---------TTC
T ss_pred CCcceEEeecCCCEEEEEecCCCC-CCc--------eeeEEEEEEECCCCCccEEE-----E----cC---------CCc
Confidence 588888765558999999975321 010 01234677654322 11110 0 01 112
Q ss_pred EEEEeCCCCCCCEEEEEEEeCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSK 177 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~ 177 (580)
..++|+||+|+|.|.++|....
T Consensus 60 t~~~l~~L~p~t~Y~~~V~A~~ 81 (101)
T 3k2m_C 60 STATISGLSPGVDYTITVYAWG 81 (101)
T ss_dssp CEEEECSCCTTCEEEEEEEEEE
T ss_pred cEEEECCCCCCCEEEEEEEEEe
Confidence 4678999999999999997644
|
| >1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.72 E-value=0.18 Score=42.88 Aligned_cols=24 Identities=13% Similarity=0.329 Sum_probs=19.8
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCCC
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIPA 180 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~~ 180 (580)
..+++||+|+|.|.|||...+..+
T Consensus 69 ~~~v~~L~p~t~Y~frV~A~N~~G 92 (112)
T 1bpv_A 69 EFTVSGLTEDAAYEFRVIAKNAAG 92 (112)
T ss_dssp EEEECSCCSSCCEEEEEEEECTTS
T ss_pred EEEECCCCCCCEEEEEEEEEECCC
Confidence 457899999999999998866444
|
| >1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A | Back alignment and structure |
|---|
Probab=93.69 E-value=0.15 Score=47.65 Aligned_cols=95 Identities=17% Similarity=0.170 Sum_probs=54.8
Q ss_pred CCCCceEEEEeC--CCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCcccccc
Q 008029 75 SNFPEQIALAIS--SPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTS 152 (580)
Q Consensus 75 ~~~P~qi~la~~--~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~ 152 (580)
...|..+.+... ..+++.|+|.-....-|. ...=.|+|....+..+..+. .. . ..
T Consensus 104 p~pP~~~~~~~~~~~~~sv~l~W~~p~~~~~~--------i~~Y~v~y~~~~~~~~~~~~----------~~-~----~~ 160 (215)
T 1bqu_A 104 PNPPHNLSVINSEELSSILKLTWTNPSIKSVI--------ILKYNIQYRTKDASTWSQIP----------PE-D----TA 160 (215)
T ss_dssp CCCCEEEEEECC--CCSCEEEEEECCGGGGTS--------CEEEEEEEEETTCSSCEECC----------GG-G----GC
T ss_pred CCCCCceEEEEecCCCceEEEEEeCCCCCCcc--------eEEEEEEEccCCCCCceEec----------cc-c----cc
Confidence 346778877754 378999999854321110 01234566554322111110 00 0 01
Q ss_pred ccEEEEEeCCCCCCCEEEEEEEeCCC------CCccceEEEEcCCC
Q 008029 153 GIIHHVKIDGLDPGTKYYYKCGDSKI------PAMSAEHVFETLPL 192 (580)
Q Consensus 153 ~~~h~v~l~gL~P~T~Y~Yrvg~~~~------~~~S~~~~F~T~p~ 192 (580)
+....++|++|+|+|.|.+||...+. ..||+...++|.+.
T Consensus 161 ~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~g~~S~~S~~~~~~T~~~ 206 (215)
T 1bqu_A 161 STRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYED 206 (215)
T ss_dssp SCCSEEEECSCCSSEEEEEEEEEEETTSCSCCCCCCCCEEEEECCC
T ss_pred CccceEEeCCCCCCCEEEEEEEEccCCCCCccCCCCCccccccccc
Confidence 12246789999999999999976431 13677888998764
|
| >3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A | Back alignment and structure |
|---|
Probab=93.69 E-value=0.041 Score=57.03 Aligned_cols=38 Identities=16% Similarity=0.084 Sum_probs=25.0
Q ss_pred EEEEEcccCCCCCh-HHHHHHHHHCCCCEEEEccccccc
Q 008029 201 RIAVIGDLGLTSNS-STTVDHLIQNDPSLILMVGDLTYA 238 (580)
Q Consensus 201 rfav~gD~g~~~~~-~~~l~~i~~~~pDfvl~~GDl~Y~ 238 (580)
+++++||+|..... .+.++.......+-++++||+++.
T Consensus 71 pi~ViGDIHG~~~dL~~ll~~~g~~~~~~~vfLGD~VDR 109 (357)
T 3ll8_A 71 PVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDR 109 (357)
T ss_dssp SEEEECCCTTCHHHHHHHHHHHCCTTTCCEEECSCCSSS
T ss_pred cceeeccCCCCHHHHHHHHHhcCCCCCcEEEECCCccCC
Confidence 58999999986422 222322222356889999999964
|
| >1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.61 E-value=0.083 Score=45.00 Aligned_cols=38 Identities=24% Similarity=0.272 Sum_probs=29.6
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCCC---CccceEEEEcCCCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKIP---AMSAEHVFETLPLP 193 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~p~~ 193 (580)
..++|+||+|+|.|.+||...+.. .+|+...|+|.+..
T Consensus 80 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 120 (125)
T 1uen_A 80 THGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGS 120 (125)
T ss_dssp SEEEEESCCSSCEEEEEEEEEESSCEEEECCCEEEECCCCC
T ss_pred cEEEeCCCCCCCEEEEEEEEecCCCCCCCCCCEEEECCCCC
Confidence 467889999999999999664422 46788899997654
|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=93.61 E-value=0.33 Score=44.19 Aligned_cols=88 Identities=20% Similarity=0.164 Sum_probs=53.4
Q ss_pred CCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccE
Q 008029 76 NFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGII 155 (580)
Q Consensus 76 ~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 155 (580)
..|..+++.-...+++.|+|.-.... ...=.|+|....+.. . .... + +-.
T Consensus 8 ~~P~~l~~~~~~~~sv~l~W~~p~~~-----------i~~Y~v~~~~~~~~~-~-----~~~~----~---------~~~ 57 (186)
T 1qr4_A 8 DNPKDLEVSDPTETTLSLRWRRPVAK-----------FDRYRLTYVSPSGKK-N-----EMEI----P---------VDS 57 (186)
T ss_dssp CCCEEEEEESCCSSEEEEEEECCSSC-----------CSEEEEEEECTTCCE-E-----EEEE----C---------TTC
T ss_pred cCCCceEEEecCCCEEEEEEeCCCCC-----------ccEEEEEEEeCCCCe-e-----EEEC----C---------CCC
Confidence 46888888766689999999854211 023456676432211 0 0000 0 112
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCCCCccc--eEEEEcCCCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKIPAMSA--EHVFETLPLP 193 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~p~~ 193 (580)
..++|+||+|+|.|.++|...+..+.|. ...++|.|.+
T Consensus 58 ~~~~i~~L~p~t~Y~~~V~a~~~~~~s~~~~~~~~t~p~~ 97 (186)
T 1qr4_A 58 TSFILRGLDAGTEYTISLVAEKGRHKSKPTTIKGSTVVGS 97 (186)
T ss_dssp SEEEEESCCSSCEEEEEEEEESSSCBCCCEEEEEECCCCC
T ss_pred CEEEECCCCCCCEEEEEEEEEcCCccCCCEEEEEECCCCC
Confidence 3567899999999999998755444444 5677777644
|
| >1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.58 E-value=0.14 Score=42.87 Aligned_cols=78 Identities=10% Similarity=0.076 Sum_probs=44.2
Q ss_pred CCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccE
Q 008029 76 NFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGII 155 (580)
Q Consensus 76 ~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 155 (580)
..|..+.+.-...+++.|+|.-....-|.. ...=.|+|.......+.... .. ....
T Consensus 10 ~~P~~l~~~~~~~~sv~l~W~~p~~~~~~~-------i~~Y~v~~~~~~~~~w~~~~--------~~---------~~~~ 65 (111)
T 1x5y_A 10 SAPQHLTVEDVTDTTTTLKWRPPDRIGAGG-------IDGYLVEYCLEGSEEWVPAN--------KE---------PVER 65 (111)
T ss_dssp CCCEEEEEEEECSSEEEEEEECCSCCCSSC-------CCEEEEEEEETTCCCCEESS--------SS---------CBSS
T ss_pred cCCCCCEEEeccCCEEEEEECCCCcCCCCc-------ccEEEEEEEECCCCceEEcc--------cc---------CCcc
Confidence 357777776656889999998643211100 11234566544322111100 00 0112
Q ss_pred EEEEeCCCCCCCEEEEEEEeCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSK 177 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~ 177 (580)
..++|++|+|+|.|.|||...+
T Consensus 66 ~~~~v~~L~p~t~Y~frV~A~n 87 (111)
T 1x5y_A 66 CGFTVKDLPTGARILFRVVGVN 87 (111)
T ss_dssp SEEEEECCCTTCCEEEEEEEEE
T ss_pred cEEEECCCCCCCEEEEEEEEEc
Confidence 4567899999999999997755
|
| >2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B* | Back alignment and structure |
|---|
Probab=93.45 E-value=0.29 Score=46.71 Aligned_cols=97 Identities=12% Similarity=0.152 Sum_probs=57.9
Q ss_pred CCCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCcccccccc
Q 008029 75 SNFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGI 154 (580)
Q Consensus 75 ~~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 154 (580)
...|..+++...+.+++.|+|........ +. ....=.|+|........ .+. . ... ...
T Consensus 106 ~~pP~~l~~~~~~~~~l~lsW~~p~~~~~-----~~-~~l~Yevry~~~~~~w~-~~~-~-~~~-------------~~~ 163 (214)
T 2b5i_B 106 LMAPISLQVVHVETHRCNISWEISQASHY-----FE-RHLEFEARTLSPGHTWE-EAP-L-LTL-------------KQK 163 (214)
T ss_dssp CCCCEEEEEEEECSSCEEEEEECCSCCGG-----GT-TCEEEEEEEECTTSCST-TSC-C-EEE-------------CSC
T ss_pred CCCCceEEEEEecCCeEEEEECCCCcccc-----CC-CceEEEEEEecCCCChh-eee-e-eee-------------ccc
Confidence 36788888887667799999987532100 00 00134567766543111 110 0 000 012
Q ss_pred EEEEEeCCCCCCCEEEEEEEeCCC-------CCccceEEEEcCCCC
Q 008029 155 IHHVKIDGLDPGTKYYYKCGDSKI-------PAMSAEHVFETLPLP 193 (580)
Q Consensus 155 ~h~v~l~gL~P~T~Y~Yrvg~~~~-------~~~S~~~~F~T~p~~ 193 (580)
-+.+.|.+|+|||+|..||..... ..||+...|+|.|.+
T Consensus 164 ~~~~~l~~L~p~t~Y~vqVRa~~~~~~~G~WS~WS~~~~~~T~~~~ 209 (214)
T 2b5i_B 164 QEWICLETLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKPAA 209 (214)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEESCCSSCCCCCCCCCEEEECCC--
T ss_pred ceEEEeccCCCCCEEEEEEEEeeCCCCCCCccCCCCCEEEEcCCCC
Confidence 257788999999999999975432 368889999998854
|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A | Back alignment and structure |
|---|
Probab=93.37 E-value=0.6 Score=45.61 Aligned_cols=92 Identities=22% Similarity=0.167 Sum_probs=54.7
Q ss_pred CCCCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccc
Q 008029 74 TSNFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSG 153 (580)
Q Consensus 74 ~~~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~ 153 (580)
....|..+.+.-...+++.|+|.-.... ...=.|+|........... ... +.
T Consensus 20 ~p~~P~~l~~~~~~~~sv~l~W~~p~~~-----------~~~Y~v~~~~~~~~~~~~~----~~~-------------~~ 71 (290)
T 3r8q_A 20 AIPAPTDLKFTQVTPTSLSAQWTPPNVQ-----------LTGYRVRVTPKEKTGPMKE----INL-------------AP 71 (290)
T ss_dssp CCCCCEEEEEEEECSSCEEEEEECCSSC-----------CCEEEEEEEESSSSSCCEE----EEE-------------CT
T ss_pred CCCCCCceEEEECCCCEEEEEEeCCCCC-----------eeEEEEEEEeCCCCCceEE----EEc-------------CC
Confidence 3456888888766699999999864211 1233567765442211110 000 11
Q ss_pred cEEEEEeCCCCCCCEEEEEEEeCCCCCcc--ceEEEEcCCCC
Q 008029 154 IIHHVKIDGLDPGTKYYYKCGDSKIPAMS--AEHVFETLPLP 193 (580)
Q Consensus 154 ~~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S--~~~~F~T~p~~ 193 (580)
-...+.|++|+|+|.|.++|...+..+.+ ....++|.+.+
T Consensus 72 ~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~s~~~~~t~~~~ 113 (290)
T 3r8q_A 72 DSSSVVVSGLMVATKYEVSVYALKDTLTSRPAQGVVTTLENV 113 (290)
T ss_dssp TCCEEEECSCCSSCEEEEEEEEEETTEECCCEEEEEECCCCC
T ss_pred CccEEEeCCCCCCCEEEEEEEEEeCCCCCCCcceeEecCCCC
Confidence 23567899999999999999765433222 24567776544
|
| >1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A | Back alignment and structure |
|---|
Probab=93.12 E-value=0.46 Score=44.37 Aligned_cols=92 Identities=15% Similarity=0.166 Sum_probs=55.1
Q ss_pred CCCCceEEEEeC------CCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEc-ccCCCcceEEeeEEEEEeeecccCCc
Q 008029 75 SNFPEQIALAIS------SPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYG-KQSGKYTSKRGGNATVYSQLYPFKGL 147 (580)
Q Consensus 75 ~~~P~qi~la~~------~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg-~~~~~~~~~a~g~~~~y~~~~p~~g~ 147 (580)
...|..+.+... ..+++.|+|..... .|.. ...=.|+|. ...+..+..+. ..
T Consensus 109 p~pP~~~~~~~~~~~~~~~~~~~~l~W~~p~~-~~~~-------~l~Y~v~y~~~~~~~~w~~~~----~~--------- 167 (215)
T 1cd9_B 109 LEPPMLQALDIGPDVVSHQPGCLWLSWKPWKP-SEYM-------EQECELRYQPQLKGANWTLVF----HL--------- 167 (215)
T ss_dssp CCCCEEEECCC-------CCSCEEEEEECCGG-GTTS-------CEEEEEEEEESSTTCCCEEEE----EE---------
T ss_pred eCCCcEEEEEEeccccCCCCCeEEEEEeCCCC-CCeE-------EEEEEEEEccCCCCCCcEEEe----cc---------
Confidence 456777776654 47889999986432 1110 013457787 44333222211 00
Q ss_pred cccccccEEEEEeCCCCCCCEEEEEEEeCCC------CCccceEEEEcCC
Q 008029 148 LNYTSGIIHHVKIDGLDPGTKYYYKCGDSKI------PAMSAEHVFETLP 191 (580)
Q Consensus 148 ~~~~~~~~h~v~l~gL~P~T~Y~Yrvg~~~~------~~~S~~~~F~T~p 191 (580)
.+.-..+.|.+|+|+|+|.+||..... ..||+...|+|+.
T Consensus 168 ----~~~~~~~~l~~L~p~t~Y~~~Vra~~~~g~G~wS~wS~~~~~~T~e 213 (215)
T 1cd9_B 168 ----PSSKDQFELCGLHQAPVYTLQMRCIRSSLPGFWSPWSPGLQLRPTM 213 (215)
T ss_dssp ----ESCEEEEEECCCCSCSCEEEEEEEEESSSCCCCCCCCCCEEECCCC
T ss_pred ----cCcceEEEEcCCCCCCEEEEEEEeeECCCCCCCcCCCCccceecCC
Confidence 012256789999999999999965431 2578888999865
|
| >2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.08 E-value=0.62 Score=39.03 Aligned_cols=36 Identities=14% Similarity=0.214 Sum_probs=24.7
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCCCC---ccc-eEEEEcCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKIPA---MSA-EHVFETLP 191 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~~~---~S~-~~~F~T~p 191 (580)
..++|++|+|+|.|.+||...+..+ +|+ ...++|.+
T Consensus 73 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~t~~ 112 (118)
T 2yrz_A 73 TSVVVEDLLPNHSYVFRVRAQSQEGWGREREGVITIESQV 112 (118)
T ss_dssp CEEEEESCCTTCEEEEEEEEEESSCEEEEEEEEEECCCSC
T ss_pred CEEEeCCCCCCCEEEEEEEEEcCCcCCCCcCCceEeCCCC
Confidence 4567899999999999997755333 344 34444443
|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=93.01 E-value=0.85 Score=44.20 Aligned_cols=92 Identities=17% Similarity=0.193 Sum_probs=53.4
Q ss_pred CCCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCcccccccc
Q 008029 75 SNFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGI 154 (580)
Q Consensus 75 ~~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 154 (580)
...|..+.+.....+++.|+|.-.... ...=.|+|....+...... ... + + .+-
T Consensus 105 p~~P~~l~~~~~~~~sv~l~W~~p~~~-----------i~~Y~v~~~~~~~~~~~~~-----~~~------~--~--~~~ 158 (283)
T 1tdq_A 105 IDAPKNLRVGSRTATSLDLEWDNSEAE-----------AQEYKVVYSTLAGEQYHEV-----LVP------K--G--IGP 158 (283)
T ss_dssp CCCCEEEEEEEECSSCEEEEEECCSSC-----------CSEEEEEEEETTCCCCEEE-----EEE------C--C--SSS
T ss_pred CCCCCceEEEecCCCeEEEEecCCCCC-----------ccEEEEEEEeCCCCcceEE-----ECC------C--C--Ccc
Confidence 346777777655688999999864311 1234567765433221111 000 0 0 011
Q ss_pred EEEEEeCCCCCCCEEEEEEEeCCCCCccce--EEEEcCCC
Q 008029 155 IHHVKIDGLDPGTKYYYKCGDSKIPAMSAE--HVFETLPL 192 (580)
Q Consensus 155 ~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~--~~F~T~p~ 192 (580)
.....|++|+|+|.|.++|...+..+.|.. ..+.|.|.
T Consensus 159 ~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~~~~~~t~~~ 198 (283)
T 1tdq_A 159 TTKTTLTDLVPGTEYGVGISAVMNSKQSIPATMNARTELD 198 (283)
T ss_dssp EEEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCC
T ss_pred cceEEEecCCCCCEEEEEEEEEeCCCCCcceEEEecCCCC
Confidence 467789999999999999977554444543 45555543
|
| >1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=92.94 E-value=0.059 Score=58.36 Aligned_cols=22 Identities=9% Similarity=0.114 Sum_probs=19.6
Q ss_pred HHHHHHHHhcCCcEEEEccccC
Q 008029 392 QEMEALLYQYGVDIVFSGHVHA 413 (580)
Q Consensus 392 ~~l~~Ll~ky~VdlvlsGH~H~ 413 (580)
+.+.++|+++++++++-||.-.
T Consensus 263 d~v~~FL~~n~l~lIIRaHq~v 284 (521)
T 1aui_A 263 PAVCEFLQHNNLLSILRAHEAQ 284 (521)
T ss_dssp HHHHHHHHHTTCSEEEECCSCC
T ss_pred HHHHHHHHHcCCcEEEEccchh
Confidence 5778899999999999999865
|
| >2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.92 E-value=0.32 Score=41.95 Aligned_cols=74 Identities=23% Similarity=0.467 Sum_probs=45.2
Q ss_pred CCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccE
Q 008029 76 NFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGII 155 (580)
Q Consensus 76 ~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 155 (580)
..|..+.+.-...+++.|+|.-.... ...=.|+|....+..... .. .. + +-.
T Consensus 30 ~~P~~l~v~~~t~~Si~lsW~~p~~~-----------i~~Y~V~y~~~~~~~~~~----~~---~v-~---------~~~ 81 (121)
T 2ocf_D 30 DVPTKLEVVAATPTSLLISWDAPAVT-----------VRYYRITYGETGGNSPVQ----EF---TV-P---------GSK 81 (121)
T ss_dssp CSCEEEEEEEECSSCEEEEEECCSSC-----------CCEEEEEEEETTTCSCBE----EE---EE-E---------TTC
T ss_pred CCCCccEEEecCCCEEEEEEcCCCCC-----------CcEEEEEEEECCCCCccE----EE---Ee-C---------CCc
Confidence 46888888766689999999753211 122346676543321100 00 00 0 112
Q ss_pred EEEEeCCCCCCCEEEEEEEeCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSK 177 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~ 177 (580)
..++|+||+|+|.|.++|...+
T Consensus 82 t~~~l~gL~P~t~Y~~~V~A~~ 103 (121)
T 2ocf_D 82 STATISGLKPGVDYTITVYAVT 103 (121)
T ss_dssp CEEEECCCCTTCEEEEEEEEEC
T ss_pred CEEEeCCCCCCCEEEEEEEEEe
Confidence 4678999999999999998755
|
| >3mpc_A FN3-like protein; fibronectin, FN(III), unknown function; 1.60A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=92.78 E-value=0.34 Score=40.71 Aligned_cols=84 Identities=21% Similarity=0.311 Sum_probs=46.7
Q ss_pred CCCceEEEEeCC-CCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccC--CCcceEEeeEEEEEeeecccCCcccccc
Q 008029 76 NFPEQIALAISS-PTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQS--GKYTSKRGGNATVYSQLYPFKGLLNYTS 152 (580)
Q Consensus 76 ~~P~qi~la~~~-~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~--~~~~~~a~g~~~~y~~~~p~~g~~~~~~ 152 (580)
..|..+...... .+++.++|.-... .....-|.... ..+...+.+. .
T Consensus 6 ~aP~~l~a~~~~~~~~v~LsW~~~~~-------------~~~Y~VyR~~~~~~~~~~i~~~~----~------------- 55 (103)
T 3mpc_A 6 AFPTGLSAVLDSSGNTANLTWNAAPG-------------ANSYNVKRSTKSGGPYTTIATNI----T------------- 55 (103)
T ss_dssp CCCEEEEEEECTTSCCEEEEEECCTT-------------CSEEEEEEESSTTCCCEEEEEEE----C-------------
T ss_pred CCCceeEEEEeCCCCEEEEEEECCCC-------------CCEEEEEEecCCCCCcEEEeecC----C-------------
Confidence 468888877654 6799999986321 12333343322 2222222110 0
Q ss_pred ccEEEEEeCCCCCCCEEEEEEEeCCCC---CccceEEEEcCC
Q 008029 153 GIIHHVKIDGLDPGTKYYYKCGDSKIP---AMSAEHVFETLP 191 (580)
Q Consensus 153 ~~~h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~p 191 (580)
.. ..+.++|+||++|+|+|..-+.. ..|...+.++..
T Consensus 56 ~t--sy~d~~l~~g~~Y~Y~V~Avn~~geS~~S~~vs~~~~~ 95 (103)
T 3mpc_A 56 ST--NYTDTGVATGTKYYYVVSAVSNGVETLNSAEAILQYPK 95 (103)
T ss_dssp SS--EEEETTCCTTCCCEEEEEEEETTEECCCCCCEECBCCC
T ss_pred CC--EEEECCCCCCCEEEEEEEEEeCcCCcCCCccEEEECCc
Confidence 01 12347999999999999764322 345566665544
|
| >1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A | Back alignment and structure |
|---|
Probab=92.77 E-value=0.28 Score=48.60 Aligned_cols=94 Identities=17% Similarity=0.202 Sum_probs=54.4
Q ss_pred CCCCceEEEEeC-C-CCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCcccccc
Q 008029 75 SNFPEQIALAIS-S-PTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTS 152 (580)
Q Consensus 75 ~~~P~qi~la~~-~-~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~ 152 (580)
...|..+.+... . .+++.|+|.-....-|. ...=.|+|.......+..+. .. + ..
T Consensus 200 p~pP~~~~v~~~~~~~~sv~l~W~~p~~~~~~--------i~~Y~v~y~~~~~~~w~~~~----------~~----~-~~ 256 (303)
T 1i1r_A 200 PNPPHNLSVINSEELSSILKLTWTNPSIKSVI--------ILKYNIQYRTKDASTWSQIP----------PE----D-TA 256 (303)
T ss_dssp CCCCEEEEEECCSSSSSCEEEEEECCGGGGTS--------CEEEEEEEEETTCSSCEECC----------GG----G-GC
T ss_pred cCCCcceEEEEecCCCCEEEEEECCCCCCCcc--------cEEEEEEEEeCCCCCceEEc----------cc----c-CC
Confidence 346777777654 2 78999999864321110 01234666655432221110 00 0 01
Q ss_pred ccEEEEEeCCCCCCCEEEEEEEeCCC------CCccceEEEEcCC
Q 008029 153 GIIHHVKIDGLDPGTKYYYKCGDSKI------PAMSAEHVFETLP 191 (580)
Q Consensus 153 ~~~h~v~l~gL~P~T~Y~Yrvg~~~~------~~~S~~~~F~T~p 191 (580)
......+|++|+|+|.|.+||...+. ..||+...|+|+.
T Consensus 257 ~~~~~~~l~~L~p~t~Y~~rV~A~n~~G~G~~S~wS~~~~~~T~e 301 (303)
T 1i1r_A 257 STRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYE 301 (303)
T ss_dssp SCCSEEEECSCCTTCEEEEEEEEEETTSCSCCCCCCCCEEEECCC
T ss_pred CceeEEEeCCCCCCCEEEEEEEeccCCCCCCcCCCCCccceeCCc
Confidence 12245789999999999999976431 2567888999864
|
| >2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A | Back alignment and structure |
|---|
Probab=92.76 E-value=0.58 Score=43.38 Aligned_cols=35 Identities=26% Similarity=0.189 Sum_probs=27.6
Q ss_pred EEEeCCCCCCCEEEEEEEeCCC---CCccceEEEEcCC
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKI---PAMSAEHVFETLP 191 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p 191 (580)
..+|+||+|+|.|.|||...+. ..+|+...++|..
T Consensus 175 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 212 (214)
T 2ibg_A 175 SFKIAPLETATMYEFKLQSFSAASASEFSALKQGRTQR 212 (214)
T ss_dssp EEEECSCCTTCEEEEEEEEECSSCBCCCCCCEEEECCC
T ss_pred EEEeCCCCCCCEEEEEEEEEcCCccCCCcceEeeEecC
Confidence 4578999999999999976443 2567888888864
|
| >1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=92.70 E-value=0.056 Score=48.32 Aligned_cols=47 Identities=23% Similarity=0.354 Sum_probs=33.6
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCC---CCccceEEEEcCCCCCCCCCCeEE
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKI---PAMSAEHVFETLPLPSPTSYPHRI 202 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~~~~~~~~rf 202 (580)
..++|+||+|+|.|..||..-+. +..|+...|+|.+.......++++
T Consensus 82 ts~~v~~L~P~T~Y~~rV~A~n~~G~G~~S~~~~f~T~~~~P~~P~~p~l 131 (137)
T 1wk0_A 82 TNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSCEPDIPNPPRI 131 (137)
T ss_dssp SEEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCCSSSCCCSCSCC
T ss_pred cEEEEcCCCCCCEEEEEEEEEeCCCcCCCCCCEEEECCCCCCCCCCCCEE
Confidence 56789999999999999966432 257888899998755332234444
|
| >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.51 E-value=0.43 Score=43.29 Aligned_cols=80 Identities=18% Similarity=0.216 Sum_probs=46.9
Q ss_pred CCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccE
Q 008029 76 NFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGII 155 (580)
Q Consensus 76 ~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 155 (580)
..|..+.+.-...+++.|+|.......|.. ...=.|+|............ . ...
T Consensus 104 ~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~-------i~~Y~v~~~~~~~~~~~~~~------~-------------~~~ 157 (197)
T 3lpw_A 104 LPPGKITLMDVTRNSVSLSWEKPEHDGGSR-------ILGYIVEMQTKGSDKWATCA------T-------------VKV 157 (197)
T ss_dssp CCCSCEEEEEECSSCEEEEECCCSCCTTSC-------CCEEEEEEEETTCSCCEEEE------E-------------ESS
T ss_pred CCCcccEEEeccCCeEEEEecCCCcCCCCc-------ccEEEEEEEeCCCCceEEee------c-------------ccc
Confidence 467788876556889999998643211100 12235666654433221110 0 011
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCCCCc
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKIPAM 181 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~~~~ 181 (580)
...+|++|+|+|.|.|+|...+..+.
T Consensus 158 ~~~~~~~L~p~t~Y~~~V~A~n~~G~ 183 (197)
T 3lpw_A 158 TEATITGLIQGEEYSFRVSAQNEKGI 183 (197)
T ss_dssp SEEEECCCCTTCEEEEEEEEEETTEE
T ss_pred cEEEeCCcCCCCEEEEEEEEEeCCcc
Confidence 34678999999999999987553333
|
| >3up1_A Interleukin-7 receptor subunit alpha; cytokine receptor, fibronectin type 3 fold, membrane and SOL glycosylation, immune system; HET: NAG FUC NGA; 2.15A {Homo sapiens} PDB: 3di3_B* 3di2_B* | Back alignment and structure |
|---|
Probab=92.51 E-value=0.49 Score=45.73 Aligned_cols=97 Identities=15% Similarity=0.144 Sum_probs=59.1
Q ss_pred CCCCCCceEEEEeCC-CCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCC-CcceEEeeEEEEEeeecccCCcccc
Q 008029 73 VTSNFPEQIALAISS-PTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSG-KYTSKRGGNATVYSQLYPFKGLLNY 150 (580)
Q Consensus 73 ~~~~~P~qi~la~~~-~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~-~~~~~a~g~~~~y~~~~p~~g~~~~ 150 (580)
+....|..+.+.... +.++.|+|.......+. . ....-.|+|..... ..+.....
T Consensus 111 VKPdPP~nLtv~~~~~~~~l~LsW~~P~~~~~~----~--~~L~YEVrYr~~~~~~~W~~v~~----------------- 167 (223)
T 3up1_A 111 VKPEAPFDLSVVYREGANDFVVTFNTSHLQKKY----V--KVLMHDVAYRQEKDENKWTHVNL----------------- 167 (223)
T ss_dssp BCCCCCEEEEEEEETTTTEEEEEEECGGGGCSS----S--CCEEEEEEEEESSCSSCCEEEEE-----------------
T ss_pred EEcCCCcceEEEEEcCCCCEEEEECCCCCCCCc----c--eeEEEEEEEEeCCCCCceEEEEe-----------------
Confidence 445678888888776 77899999975321110 0 01234577776532 22211100
Q ss_pred ccccEEEEEeCCCCCCCEEEEEEEeCCC-------CCccceEEEEcCCCC
Q 008029 151 TSGIIHHVKIDGLDPGTKYYYKCGDSKI-------PAMSAEHVFETLPLP 193 (580)
Q Consensus 151 ~~~~~h~v~l~gL~P~T~Y~Yrvg~~~~-------~~~S~~~~F~T~p~~ 193 (580)
...-..+.+.+|+|+|+|..||..... ..||+...|+|++.+
T Consensus 168 -~~t~~~i~l~~L~Pgt~Y~vqVR~r~~~~~~G~WSeWS~~~~~~T~~~~ 216 (223)
T 3up1_A 168 -SSTKLTLLQRKLQPAAMYEIKVRSIPDHYFKGFWSEWSPSYYFRTPEIN 216 (223)
T ss_dssp -SSSEEEEEGGGSCTTCEEEEEEEEEECSSCCBCCCCCCCCEEEECCCCC
T ss_pred -cCceeEEeccccCCCcEEEEEEEEeeCCCCCCCCCCCCCCeEEECCCCC
Confidence 011245667899999999999965331 257778999997654
|
| >1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=92.44 E-value=0.74 Score=39.72 Aligned_cols=38 Identities=16% Similarity=0.038 Sum_probs=30.1
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCC---CCccceEEEEcCCCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKI---PAMSAEHVFETLPLP 193 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~ 193 (580)
.++.|+||+|+|.|.++|..-+. ...|+...|+|+...
T Consensus 75 ~~~~l~~L~p~T~Y~~~V~A~n~~G~Gp~S~~v~~~T~e~v 115 (120)
T 1ujt_A 75 RSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEES 115 (120)
T ss_dssp CEEEEESCCSSEEEEEEEEEESSSCCCCCCCCEEEEECSSC
T ss_pred CEEEECCCCCCCEEEEEEEEECCCccCCCCCCEEEECCCCC
Confidence 56789999999999999965432 357888999997644
|
| >3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A | Back alignment and structure |
|---|
Probab=92.33 E-value=0.19 Score=49.08 Aligned_cols=36 Identities=17% Similarity=0.163 Sum_probs=28.7
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCCC--CccceEEEEcCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKIP--AMSAEHVFETLP 191 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~~--~~S~~~~F~T~p 191 (580)
...+|+||+|+|.|.++|...+.. .+|+...|+|++
T Consensus 253 ~~~~~~~L~p~t~Y~~~V~A~n~~Gg~~s~~~~~~T~~ 290 (290)
T 3l5i_A 253 TEYTLSSLTSDTLYMVRMAAYTDEGGKDGPEFTFTTPK 290 (290)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTEEEECCCEEEECCC
T ss_pred eEEEeCCCCCCCEEEEEEEEEeCCCCCCCCceEeecCC
Confidence 456799999999999999664433 478899999964
|
| >2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A | Back alignment and structure |
|---|
Probab=92.27 E-value=0.26 Score=45.99 Aligned_cols=22 Identities=27% Similarity=0.443 Sum_probs=19.0
Q ss_pred EEEEeCCCCCCCEEEEEEEeCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSK 177 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~ 177 (580)
.+++|+||+|+|+|.++|..-.
T Consensus 157 t~~~l~gL~p~t~Y~~~V~A~~ 178 (195)
T 2qbw_A 157 STATISGLKPGVDYTITVYAYS 178 (195)
T ss_dssp SEEEECSCCTTCEEEEEEEEES
T ss_pred CEEEeCCCCCCCEEEEEEEEEe
Confidence 4678999999999999997754
|
| >3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* | Back alignment and structure |
|---|
Probab=92.16 E-value=0.4 Score=52.55 Aligned_cols=91 Identities=27% Similarity=0.270 Sum_probs=52.4
Q ss_pred CCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccE
Q 008029 76 NFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGII 155 (580)
Q Consensus 76 ~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 155 (580)
..|..+.+.-...+++.|+|.-.+...|. ...=.|+|.......... .. .+..
T Consensus 442 ~~Ps~~~~~~~s~tSV~LsW~pP~~~ng~--------I~~Y~V~y~~~~~~~~~~------~v-------------~~~~ 494 (536)
T 3fl7_A 442 TEPPKVRLEGRSTTSLSVSWSIPPPQQSR--------VWKYEVTYRKKGDSNSYN------VR-------------RTEG 494 (536)
T ss_dssp CCCCEEEEEECCC-CCEEEEECCTTTTTT--------CSEEEEEEEEC--CCCCE------EE-------------EESS
T ss_pred cCCCCCceeeccCCeEEEEEECCcCCCCc--------ccEEEEEEEECCCCceEE------EE-------------cCCC
Confidence 35777776444488999999854221110 012346666543321000 00 0112
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCC---CCccceEEEEcCCCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKI---PAMSAEHVFETLPLP 193 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~ 193 (580)
..++|+||+|+|.|.+||...+. ..+|+...|+|++..
T Consensus 495 ts~~l~gL~P~T~Y~frVrA~n~~G~Gp~S~~v~~~T~~~~ 535 (536)
T 3fl7_A 495 FSVTLDDLAPDTTYLVQVQALTQEGQGAGSKVHEFQTLSPE 535 (536)
T ss_dssp SEEECCSCCSSCEEEEEEEEECC---CEECCCEEEECCC--
T ss_pred CEEEECCCCCCCEEEEEEEEEcCCcccCCCCCEEEEeCCCC
Confidence 35679999999999999976543 247889999998754
|
| >3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D* | Back alignment and structure |
|---|
Probab=92.12 E-value=0.4 Score=40.90 Aligned_cols=72 Identities=26% Similarity=0.523 Sum_probs=43.5
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|..+.+.-...+++.|+|...... ...=.|+|....+..... ... . ++-..
T Consensus 6 ~P~~L~v~~~t~~Sv~lsW~~p~g~-----------i~~Y~v~y~~~~~~~~~~----~~~---v----------~~~~t 57 (114)
T 3qwq_B 6 VPRDLEVVAATPTSLLISWDSGRGS-----------YQYYRITYGETGGNSPVQ----EFT---V----------PGPVH 57 (114)
T ss_dssp CCEEEEEEEEETTEEEEEEECCSCC-----------CSEEEEEEEESSCSSCCE----EEE---E----------ETTCC
T ss_pred CCCceEEEecCCCEEEEEEcCCcCc-----------ccEEEEEEEECCCCCccE----EEE---e----------CCCcC
Confidence 5778877655589999999863211 023356776544321000 000 0 11224
Q ss_pred EEEeCCCCCCCEEEEEEEeC
Q 008029 157 HVKIDGLDPGTKYYYKCGDS 176 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~ 176 (580)
.++|+||+|+|.|..+|...
T Consensus 58 s~~l~gL~P~T~Y~v~V~A~ 77 (114)
T 3qwq_B 58 TATISGLKPGVDYTITVYAV 77 (114)
T ss_dssp EEEECSCCTTCEEEEEEEEE
T ss_pred EEEeCCCCCCCEEEEEEEEE
Confidence 57899999999999999653
|
| >1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=91.98 E-value=0.15 Score=44.26 Aligned_cols=37 Identities=19% Similarity=0.234 Sum_probs=29.7
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCC---CccceEEEEcCCCC
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIP---AMSAEHVFETLPLP 193 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~p~~ 193 (580)
.++|+||+|+|+|.+||...+.. .+|+...++|++.+
T Consensus 76 ~~~v~gL~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~p 115 (120)
T 1wfu_A 76 RHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRES 115 (120)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCCCC
T ss_pred EEEECCCCCCCEEEEEEEEECCCCCCCCCccEeeEcCCCC
Confidence 36789999999999999876643 45778899998764
|
| >3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A | Back alignment and structure |
|---|
Probab=91.84 E-value=0.9 Score=42.24 Aligned_cols=94 Identities=16% Similarity=0.228 Sum_probs=55.2
Q ss_pred CCCCCceEEEEeC---C-CCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccc
Q 008029 74 TSNFPEQIALAIS---S-PTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLN 149 (580)
Q Consensus 74 ~~~~P~qi~la~~---~-~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~ 149 (580)
....|..+.+... . .+++.|+|.......... +-....=.|+|....+...... ..
T Consensus 102 ~p~pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~~~~----g~~~~~Y~v~y~~~~~~~~~~~------~~---------- 161 (210)
T 3n06_B 102 QPDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKT----GWFTLLYEIRLKPEKAAEWEIH------FA---------- 161 (210)
T ss_dssp CCCCCEEEEEEEECCSSSCCEEEEEEECCTTCCCTT----SSCCEEEEEEEECTTCSSCEEE------EE----------
T ss_pred ecCCCceEEEEEecCcCCCceEEEEcCCCCCccccC----CeEEEEEEEEEecCCCCCCEEE------ec----------
Confidence 3456888877653 2 689999998643211000 0000233567766543222111 00
Q ss_pred cccccEEEEEeCCCCCCCEEEEEEEeCCC----CCccceEEEEcC
Q 008029 150 YTSGIIHHVKIDGLDPGTKYYYKCGDSKI----PAMSAEHVFETL 190 (580)
Q Consensus 150 ~~~~~~h~v~l~gL~P~T~Y~Yrvg~~~~----~~~S~~~~F~T~ 190 (580)
+....+.|.+|+|+|.|..||..... ..||+...|+|+
T Consensus 162 ---~~~~~~~l~~L~p~t~Y~v~Vra~~~~g~wS~wS~~~~~~Tp 203 (210)
T 3n06_B 162 ---GQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQIP 203 (210)
T ss_dssp ---ETCSEEEECCCCTTCEEEEEEEEEESSSCCCCCCCCEEEECC
T ss_pred ---cCceEEEEeccCCCCEEEEEEEEecCCCcccCCCCceeEECc
Confidence 01135678999999999999965321 367889999995
|
| >3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene} | Back alignment and structure |
|---|
Probab=91.81 E-value=0.25 Score=40.44 Aligned_cols=73 Identities=23% Similarity=0.458 Sum_probs=43.8
Q ss_pred CCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCc-ceEEeeEEEEEeeecccCCcccccccc
Q 008029 76 NFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKY-TSKRGGNATVYSQLYPFKGLLNYTSGI 154 (580)
Q Consensus 76 ~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~-~~~a~g~~~~y~~~~p~~g~~~~~~~~ 154 (580)
..|..+++.-...+++.|+|.-.. |. + ..=.|+|....+.. .... . . ++-
T Consensus 6 ~~P~~l~v~~~t~~Si~lsW~~p~---~~----i----~~Y~v~y~~~~~~~~~~~~-----~---v----------~~~ 56 (97)
T 3qht_C 6 SVPTKLEVVAATPTSLLISWDASS---SS----V----SYYRITYGETGGNSPVQEF-----T---V----------PGS 56 (97)
T ss_dssp CSSSSCEEEEEETTEEEEECCCCC---SS----C----CEEEEEEEESSSCSCCEEE-----E---E----------ETT
T ss_pred CCCCceEEEecCCCEEEEEEeCCC---CC----C----CEEEEEEEECCCCCccEEE-----E---e----------CCC
Confidence 357788776555899999997532 10 0 12346676543321 1100 0 0 112
Q ss_pred EEEEEeCCCCCCCEEEEEEEeCC
Q 008029 155 IHHVKIDGLDPGTKYYYKCGDSK 177 (580)
Q Consensus 155 ~h~v~l~gL~P~T~Y~Yrvg~~~ 177 (580)
...++|+||+|+|.|.++|....
T Consensus 57 ~t~~~l~~L~p~t~Y~v~V~A~~ 79 (97)
T 3qht_C 57 SSTATISGLSPGVDYTITVYAYY 79 (97)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEE
T ss_pred cCEEEeCCCCCCCEEEEEEEEEe
Confidence 24678999999999999997643
|
| >1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=91.56 E-value=1.3 Score=38.07 Aligned_cols=88 Identities=20% Similarity=0.184 Sum_probs=48.4
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|..+++.-.. +++.|+|.-.....|. + ..=.|+|.... .... .. .. +....
T Consensus 30 ~P~~l~~~~~~-~sv~l~W~~P~~~~g~-i-------~~Y~v~y~~~~-~~~~-----~~---~~----------~~~~~ 81 (126)
T 1x5i_A 30 VPSSLHVRPLV-TSIVVSWTPPENQNIV-V-------RGYAIGYGIGS-PHAQ-----TI---KV----------DYKQR 81 (126)
T ss_dssp SCSEEEEEEET-TEEEEEEECCSCTTBC-C-------CEEEEEECSSC-GGGE-----EE---EC----------CTTCC
T ss_pred CCCeeEEEecC-CEEEEEEcCCCCCCCC-E-------eEEEEEEEcCC-CCce-----EE---Ee----------CCCee
Confidence 68888766554 8999999864321110 0 12345665321 1100 00 00 11235
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCCCccc--eEEEEcCCC
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIPAMSA--EHVFETLPL 192 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~p~ 192 (580)
..+|++|+|+|.|.+||...+..+.+. ...++|.+.
T Consensus 82 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~~~~T~~~ 119 (126)
T 1x5i_A 82 YYTIENLDPSSHYVITLKAFNNVGEGIPLYESAVTRPH 119 (126)
T ss_dssp EEEECSCCSSCEECCEEEEECSSCBCCCCCCCEECCCC
T ss_pred EEEEeCCCCCCEEEEEEEEEeCCccCcceeeEEecccC
Confidence 578899999999999997755333222 234555543
|
| >3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A | Back alignment and structure |
|---|
Probab=91.48 E-value=0.71 Score=42.78 Aligned_cols=94 Identities=18% Similarity=0.270 Sum_probs=53.7
Q ss_pred CCCCceEEEEeCC--CCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCcccccc
Q 008029 75 SNFPEQIALAISS--PTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTS 152 (580)
Q Consensus 75 ~~~P~qi~la~~~--~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~ 152 (580)
...|..+.+...+ .+++.|+|.-.....|. ...=.|+|........... ..... +
T Consensus 106 ~~~P~~~~~~~~~~s~~sv~l~W~~p~~~~g~--------i~~Y~v~~~~~~~~~~~~~--~~~~~-------------~ 162 (211)
T 3p4l_A 106 TSPPKDVTVVSKEGKPKTIIVNWQPPSEANGK--------ITGYIIYYSTDVNAEIHDW--VIEPV-------------V 162 (211)
T ss_dssp CSCCEEEEEEEETTEEEEEEEEEECCTTCCSC--------CCEEEEEEESCTTSCGGGS--EEEEE-------------E
T ss_pred CCCCcceEEEecCCCCCEEEEEECCCCCCCCC--------EEEEEEEEEECCCCCCCce--EEEEe-------------c
Confidence 3467888776654 78999999854321110 0122466665443211100 00000 1
Q ss_pred ccEEEEEeCCCCCCCEEEEEEEeCCC---CCccceEEEEcCC
Q 008029 153 GIIHHVKIDGLDPGTKYYYKCGDSKI---PAMSAEHVFETLP 191 (580)
Q Consensus 153 ~~~h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p 191 (580)
+-...++|+||+|+|.|.+||...+. +.+|+...|+|..
T Consensus 163 ~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~~~~ 204 (211)
T 3p4l_A 163 GNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPK 204 (211)
T ss_dssp SSCSEEEECCCCTTCEEEEEEEEEETTEECCCCCCEEEECC-
T ss_pred CCeeEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEccCcc
Confidence 12245678999999999999965432 2577788888764
|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=91.41 E-value=1.4 Score=42.53 Aligned_cols=101 Identities=18% Similarity=0.178 Sum_probs=58.3
Q ss_pred CCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccE
Q 008029 76 NFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGII 155 (580)
Q Consensus 76 ~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 155 (580)
..|..+.+.-...+++.|+|.-.. +. ...=.|+|......-.. ..... ....
T Consensus 16 ~~P~~l~~~~~~~~sv~l~W~~~~---~~--------~~~Y~v~~~~~~~~~~~----~~~~~-------------~~~~ 67 (283)
T 1tdq_A 16 DGPTQILVRDVSDTVAFVEWTPPR---AK--------VDFILLKYGLVGGEGGK----TTFRL-------------QPPL 67 (283)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCS---SC--------CSEEEEEEEESSSSCCC----EEEEE-------------CTTC
T ss_pred CCCcEEEEEecCCCeEEEEEECCC---Cc--------eeEEEEEEEEecCCCCc----EEEEe-------------CCCC
Confidence 468888877666899999998643 10 02335777543221111 00000 0122
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCCCCcc--ceEEEEcCCCCCCCCCCeEEEEEcc
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKIPAMS--AEHVFETLPLPSPTSYPHRIAVIGD 207 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S--~~~~F~T~p~~~~~~~~~rfav~gD 207 (580)
..+.|++|+|+|.|.++|...+..+.| ....|+|.|.+.. .+++..+++
T Consensus 68 ~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~t~p~~P~---~l~~~~~~~ 118 (283)
T 1tdq_A 68 SQYSVQALRPGSRYEVSISAVRGTNESDASSTQFTTEIDAPK---NLRVGSRTA 118 (283)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCCCE---EEEEEEECS
T ss_pred CEEEecCCCCCCEEEEEEEEECCCCCCCCeeEEEECCCCCCC---ceEEEecCC
Confidence 456789999999999999765433333 3567777665421 345544444
|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A | Back alignment and structure |
|---|
Probab=91.39 E-value=0.93 Score=44.23 Aligned_cols=89 Identities=19% Similarity=0.147 Sum_probs=52.0
Q ss_pred CCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccE
Q 008029 76 NFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGII 155 (580)
Q Consensus 76 ~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 155 (580)
..|..+.+.-...+++.|+|.-.... ...=.|+|....+...... .. ....
T Consensus 114 ~~P~~l~~~~~~~~sv~l~W~~p~~~-----------~~~Y~v~~~~~~~~~~~~~-----~~-------------~~~~ 164 (290)
T 3r8q_A 114 SPPRRARVTDATETTITISWRTKTET-----------ITGFQVDAVPANGQTPIQR-----TI-------------KPDV 164 (290)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSCC-----------CCEEEEEEEESSSCCCEEE-----EE-------------CTTC
T ss_pred CCCceeEEEEcCCCeEEEEEeCCCCc-----------ccEEEEEEEECCCCcceEE-----ec-------------CCCc
Confidence 46777777755588999999864210 1233566655433211110 00 0112
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCCCCccc--eEEEEcCCCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKIPAMSA--EHVFETLPLP 193 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~p~~ 193 (580)
....|+||+|+|.|.++|...+..+.|. ...++|.|.+
T Consensus 165 ~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~~~~~~t~p~~ 204 (290)
T 3r8q_A 165 RSYTITGLQPGTDYKIYLYTLNDNARSSPVVIDASTAIDA 204 (290)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCC
T ss_pred cEEEECCCCCCCEEEEEEEEEeCCcccCCEEEEecCCCCC
Confidence 3567899999999999997655334443 4456666543
|
| >2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A | Back alignment and structure |
|---|
Probab=91.35 E-value=0.83 Score=46.27 Aligned_cols=38 Identities=18% Similarity=0.206 Sum_probs=27.9
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCCCCcc--ceEEEEcCCCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKIPAMS--AEHVFETLPLP 193 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S--~~~~F~T~p~~ 193 (580)
...+|++|+|+|.|.+||...+..+.| ....|+|.+.+
T Consensus 349 ~~~~i~~L~~~t~Y~~~V~A~n~~G~s~~s~~~~~T~~~P 388 (389)
T 2jll_A 349 DHIILEHLQWTMGYEVQITAANRLGYSEPTVYEFSMPPKP 388 (389)
T ss_dssp CEEEECSCCTTCEEEEEEEEEC-CCBCCCEEEEEECCCCC
T ss_pred ceEEeCCcCCCCEEEEEEEEEcCCcCCCceeeEecCCCCC
Confidence 457889999999999999775543333 24589998764
|
| >1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A | Back alignment and structure |
|---|
Probab=91.34 E-value=0.88 Score=43.27 Aligned_cols=92 Identities=13% Similarity=0.181 Sum_probs=56.0
Q ss_pred CCCCCceEEEEeCC-CCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCcccccc
Q 008029 74 TSNFPEQIALAISS-PTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTS 152 (580)
Q Consensus 74 ~~~~P~qi~la~~~-~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~ 152 (580)
....|..|++.... .+++.|+|...... ++. ....=.|+|....+..+... .. . .
T Consensus 121 ~p~pP~~l~~~~~~~~~~l~v~W~~P~~~------~~~-~~l~Yev~y~~~~~~~w~~~---~~----~----------~ 176 (227)
T 1eer_B 121 LLDAPVGLVARLADESGHVVLRWLPPPET------PMT-SHIRYEVDVSAGQGAGSVQR---VE----I----------L 176 (227)
T ss_dssp ECCCCEEEEEEECSSTTCEEEEEECCSSC------SCG-GGEEEEEEEECCSSSCCCCE---EE----E----------C
T ss_pred ccCcCcceEEEEcCCCCeEEEEEcCCCCc------ccc-cceEEEEEEEcCCCCCcEEE---EE----E----------e
Confidence 34578889988875 88999999864321 000 01123566765443212110 00 0 0
Q ss_pred ccEEEEEeCCCCCCCEEEEEEEeCCC--------CCccceEEEEc
Q 008029 153 GIIHHVKIDGLDPGTKYYYKCGDSKI--------PAMSAEHVFET 189 (580)
Q Consensus 153 ~~~h~v~l~gL~P~T~Y~Yrvg~~~~--------~~~S~~~~F~T 189 (580)
.--..+.|.+|+|||.|..||..... ..||+...|+|
T Consensus 177 ~~~~~~~l~~L~p~t~Y~vqVRa~~~~~~~~g~wS~WS~~~~~~t 221 (227)
T 1eer_B 177 EGRTECVLSNLRGRTRYTFAVRARMAEPSFGGFWSEWSEPVSLLT 221 (227)
T ss_dssp TTCCEEEECCCCSSCEEEEEEEEEECTTTCCEECCCCCCCEEEEC
T ss_pred cCceEEEEcccCCCCeEEEEEEEeECCCCCCCcCCCCCCCEEEEC
Confidence 01245778999999999999976531 36788889998
|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
Probab=91.13 E-value=1 Score=45.63 Aligned_cols=90 Identities=18% Similarity=0.184 Sum_probs=54.3
Q ss_pred CCCceEEEEeCCCC-cEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCcccccccc
Q 008029 76 NFPEQIALAISSPT-SMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGI 154 (580)
Q Consensus 76 ~~P~qi~la~~~~~-sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 154 (580)
..|..+.+.-...+ ++.|+|.-... + ....=.|+|....+....... ... ...
T Consensus 4 ~~P~~l~~~~~~~~~sv~l~W~~~~~--~--------~~~~Y~v~~~~~~~~~~~~~~---~~~-------------~~~ 57 (375)
T 3t1w_A 4 SPPTNLHLEANPDTGVLTVSWERSTT--P--------DITGYRITTTPTNGQQGNSLE---EVV-------------HAD 57 (375)
T ss_dssp CCCEEEEEEEETTTTEEEEEEECCSC--S--------SCCEEEEEEEETTCTTSCCEE---EEE-------------ETT
T ss_pred CCCCccEEEecCCCeEEEEEEeCCCC--C--------CeeeEEEEEEECCCCCCccee---EEc-------------CCC
Confidence 46888888766666 99999985421 1 112345677664432111100 000 012
Q ss_pred EEEEEeCCCCCCCEEEEEEEeCCCCCccceEEEEcCC
Q 008029 155 IHHVKIDGLDPGTKYYYKCGDSKIPAMSAEHVFETLP 191 (580)
Q Consensus 155 ~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~~~F~T~p 191 (580)
...+.|++|+|+|.|.|+|...+..+.|.....++.+
T Consensus 58 ~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~~ 94 (375)
T 3t1w_A 58 QSSCTFDNLSPGLEYNVSVYTVKDDKESVPISDTIIP 94 (375)
T ss_dssp CCEEEECCCCTTCCEEEEEEEEETTEECCCEEEEECC
T ss_pred ccEEEEcCCcCCCEEEEEEEEEcCCCCCCcEEeeEcC
Confidence 2456789999999999999776555667666666544
|
| >1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=91.01 E-value=0.92 Score=38.52 Aligned_cols=36 Identities=8% Similarity=0.038 Sum_probs=26.9
Q ss_pred EEEeCCCCCCCEEEEEEEeCCC---CCccceEEEEcCCCC
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKI---PAMSAEHVFETLPLP 193 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~ 193 (580)
.+++. |+|+|.|.+||..-+. ..+|+...|+|....
T Consensus 74 ~~~~~-L~~~t~Y~~~V~A~n~~G~Gp~S~~v~~~T~~~v 112 (117)
T 1wj3_A 74 SAELV-LPIKEDYIIEVKATTDGGDGTSSEQIRIPRITSS 112 (117)
T ss_dssp EEEEE-CCCSSCEEEEEEEEESSCCCCBCCCEEECCCCCC
T ss_pred EEEEE-CCCCCEEEEEEEEECCCccCCCCCCEEEEcCCCC
Confidence 45666 9999999999965332 357888899997643
|
| >1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=90.97 E-value=0.51 Score=39.69 Aligned_cols=37 Identities=16% Similarity=0.227 Sum_probs=25.4
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCCCC---ccceE-EEEcCCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKIPA---MSAEH-VFETLPL 192 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~~~---~S~~~-~F~T~p~ 192 (580)
..++|+||+|+|+|.|||...+..+ +|..- .++|.+.
T Consensus 76 ~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~t~~~ 116 (121)
T 1wf5_A 76 TSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPES 116 (121)
T ss_dssp CEEEEESCCTTCEEEEEEEEEESSCEEEECCCCSCEECCCC
T ss_pred cEEEECCcCCCCEEEEEEEEEcCCccCCCcCCcceeEcCCC
Confidence 4578899999999999997755333 33332 4566543
|
| >1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=90.97 E-value=0.73 Score=38.72 Aligned_cols=78 Identities=14% Similarity=0.148 Sum_probs=43.5
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|..+++.-...+++.|+|.-.....|. ...=.|+|.......... ... ......
T Consensus 20 ~P~~l~~~~~~~~sv~l~W~~p~~~~g~--------i~~Y~v~~~~~~~~~~~~----~~~-------------~~~~~~ 74 (119)
T 1wfn_A 20 PVGHLSFSEILDTSLKVSWQEPGEKNGI--------LTGYRISWEEYNRTNTRV----THY-------------LPNVTL 74 (119)
T ss_dssp CCSCCEEESCCSSEEEEECCCCTTCCSC--------CCEEEEEEEESSCGGGCC----CEE-------------ECSSCC
T ss_pred CCCceEEEECCCCEEEEEEcCCCCCCCc--------EEEEEEEEEECCCCCceE----EEE-------------eCCCce
Confidence 4667777655588999999754321110 012245554433211100 000 011235
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCC
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIP 179 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~ 179 (580)
.++|++|+|+|.|.+||...+..
T Consensus 75 ~~~i~~L~p~t~Y~~~V~A~n~~ 97 (119)
T 1wfn_A 75 EYRVTGLTALTTYTIEVAAMTSK 97 (119)
T ss_dssp EEEEESCCTTCEEEEEEEEECSS
T ss_pred EEEEcCCCCCCEEEEEEEEEcCC
Confidence 67889999999999999776533
|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A | Back alignment and structure |
|---|
Probab=90.84 E-value=0.91 Score=42.09 Aligned_cols=79 Identities=19% Similarity=0.186 Sum_probs=46.4
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|..+.+.-...+++.|+|.-... + ....=.|+|....+..... .... ++-..
T Consensus 116 ~P~~l~~~~~~~~sv~l~W~~p~~--~--------~i~~Y~v~~~~~~~~~~~~----~~~~-------------~~~~~ 168 (203)
T 2gee_A 116 PPTDLRFTNIGPDTMRVTWAPPPS--I--------DLTNFLVRYSPVKNEEDVA----ELSI-------------SPSDN 168 (203)
T ss_dssp CCEEEEEEEEETTEEEEEEECCSS--C--------CCSEEEEEEEETTCGGGCE----EEEE-------------CTTCC
T ss_pred CCCceEEEEcCCCEEEEEEcCCCC--C--------CccEEEEEEEECCCCCccE----EEEc-------------CCCcC
Confidence 577777655558999999986421 1 0123456676543321111 0000 11235
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCCCcc
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIPAMS 182 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~~~S 182 (580)
.+.|+||+|+|.|.++|...+..+.|
T Consensus 169 ~~~i~~L~p~t~Y~~~V~A~~~~g~s 194 (203)
T 2gee_A 169 AVVLTNLLPGTEYVVSVSSVYEQHES 194 (203)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEEC
T ss_pred EEEECCCCCCCEEEEEEEEecCCCcC
Confidence 67889999999999999765533443
|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A | Back alignment and structure |
|---|
Probab=90.80 E-value=1 Score=45.46 Aligned_cols=92 Identities=16% Similarity=0.159 Sum_probs=54.3
Q ss_pred CCCceEEEEeCCC-CcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCcccccccc
Q 008029 76 NFPEQIALAISSP-TSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGI 154 (580)
Q Consensus 76 ~~P~qi~la~~~~-~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 154 (580)
..|..+.+.-... +++.|+|.-... + ....=.|+|....+...... ...+ .+.
T Consensus 3 ~~P~~l~~~~~~~~~sv~l~W~~~~~--~--------~i~~Y~v~~~~~~~~~~~~~---~~~~-------------~~~ 56 (368)
T 1fnf_A 3 SPPTNLHLEANPDTGVLTVSWERSTT--P--------DITGYRITTTPTNGQQGNSL---EEVV-------------HAD 56 (368)
T ss_dssp CCCEEEEEEECSSSSCEEEEEECCSC--S--------SCCEEEEEEEETTTCSSCCE---EEEE-------------CTT
T ss_pred CCCcceEEEecCCCcEEEEEEeCCCC--C--------CceEEEEEEEECCCCCCcee---EEEe-------------cCC
Confidence 4688888876554 479999986431 1 01234567765443211100 0000 112
Q ss_pred EEEEEeCCCCCCCEEEEEEEeCCCCCccceEEEEcCCCC
Q 008029 155 IHHVKIDGLDPGTKYYYKCGDSKIPAMSAEHVFETLPLP 193 (580)
Q Consensus 155 ~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~~~F~T~p~~ 193 (580)
...++|++|+|+|.|.|||...+..+.|...+..+.+.+
T Consensus 57 ~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~~~~ 95 (368)
T 1fnf_A 57 QSSCTFDNLSPGLEYNVSVYTVKDDKESVPISDTIIPAV 95 (368)
T ss_dssp CCEEECCCCCTTSCEEEEEEEEETTEECCCEEEEECCCC
T ss_pred cCEEEECCCCCCCEEEEEEEEEcCCCccCceeeeecCCC
Confidence 256789999999999999987554456665555555543
|
| >3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.70 E-value=0.55 Score=38.93 Aligned_cols=77 Identities=21% Similarity=0.371 Sum_probs=44.6
Q ss_pred CCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccE
Q 008029 76 NFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGII 155 (580)
Q Consensus 76 ~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 155 (580)
..|..+++.--..+++.|+|.-.....|. ...=.|+|.......... .. .. ++-.
T Consensus 9 ~~P~~l~v~~~t~~Sv~lsW~~p~~~~g~--------i~~Y~v~y~~~~~~~~~~----~~---~v----------~~~~ 63 (103)
T 3t04_D 9 SVPTKLEVVDATPTSLKISWDAYYSSWQN--------VKYYRITYGETGGDSPVQ----EF---TV----------PGYY 63 (103)
T ss_dssp CCCCSCEEEEEETTEEEEECTTTTTTSCC--------CCEEEEEEEETTCSSCCE----EE---EE----------ETTC
T ss_pred CCCceeEEEecCCCEEEEEccCCCCCCCc--------cceEEEEEEECCCCCccE----EE---Ec----------CCCc
Confidence 35788887655589999999753311010 012246776543211100 00 00 1123
Q ss_pred EEEEeCCCCCCCEEEEEEEeCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSK 177 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~ 177 (580)
.+++|+||+|+|.|.++|...+
T Consensus 64 ts~~l~~L~p~t~Y~~~V~A~~ 85 (103)
T 3t04_D 64 STATISGLKPGVDYTITVYAYD 85 (103)
T ss_dssp CEEEECSCCTTCCEEEEEEEES
T ss_pred CEEEeCCCCCCCEEEEEEEEEe
Confidence 5678999999999999997653
|
| >1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=90.69 E-value=1.2 Score=37.97 Aligned_cols=34 Identities=15% Similarity=0.067 Sum_probs=24.7
Q ss_pred eCCCCCCCEEEEEEEeCCCC---Cccce-EEEEcCCCC
Q 008029 160 IDGLDPGTKYYYKCGDSKIP---AMSAE-HVFETLPLP 193 (580)
Q Consensus 160 l~gL~P~T~Y~Yrvg~~~~~---~~S~~-~~F~T~p~~ 193 (580)
+.+|+|+|.|.|||...+.. .+|+. ..|+|.+..
T Consensus 78 i~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~T~~~~ 115 (127)
T 1uey_A 78 QLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASE 115 (127)
T ss_dssp EECCCTTCEECCEEEEEESSCBCCCCSCCCCEECCCSS
T ss_pred EecCCCCCEEEEEEEEEeCCccCCccccccceEcCCCC
Confidence 56999999999999765432 34555 478887643
|
| >2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=90.69 E-value=1.4 Score=37.27 Aligned_cols=23 Identities=13% Similarity=0.248 Sum_probs=19.6
Q ss_pred EEEEEeCCCCCCCEEEEEEEeCC
Q 008029 155 IHHVKIDGLDPGTKYYYKCGDSK 177 (580)
Q Consensus 155 ~h~v~l~gL~P~T~Y~Yrvg~~~ 177 (580)
...++|+||+|+|.|.+||...+
T Consensus 70 ~~~~~v~~L~p~t~Y~FRV~A~N 92 (115)
T 2ic2_A 70 SFTASVTDLKPQHTYRFRILAVY 92 (115)
T ss_dssp EEEEEECSCCSSEEEEEEEEEEE
T ss_pred eeEEEeCCCCCCCEEEEEEEEEe
Confidence 35678999999999999997655
|
| >1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=90.48 E-value=0.91 Score=38.45 Aligned_cols=92 Identities=12% Similarity=0.042 Sum_probs=53.1
Q ss_pred CCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccE
Q 008029 76 NFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGII 155 (580)
Q Consensus 76 ~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 155 (580)
..|..+.+... .+++.++|.-... |. .++ ..=.|+|... +..+..+.-. + + +-.
T Consensus 9 ~pP~~l~v~~~-~~sv~L~W~pP~~--~~--~~I----~gY~vey~~~-~~~W~~~~~~---~----~---------~~~ 62 (108)
T 1v5j_A 9 SPPRGLVAVRT-PRGVLLHWDPPEL--VP--KRL----DGYVLEGRQG-SQGWEVLDPA---V----A---------GTE 62 (108)
T ss_dssp CCCEEEEEEEC-SSSEEEEEECCSC--CS--SCC----CBEEEEEEET-TCCCEEEEEE---E----C---------SSC
T ss_pred CCCcceEEEEe-CCEEEEEECCCCC--CC--CCC----cEEEEEEEeC-CCCcEEeeee---c----C---------CCc
Confidence 45777777643 6789999987542 21 111 2335788773 2223222110 0 0 122
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCCC---CccceEEEEcCCCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKIP---AMSAEHVFETLPLP 193 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~p~~ 193 (580)
.+.+|.+|+|+++|.+||...+.. ..|+...++|....
T Consensus 63 t~~~v~~L~pg~~Y~FRV~A~n~~G~s~pS~~~~v~T~~~~ 103 (108)
T 1v5j_A 63 TELLVPGLIKDVLYEFRLVAFAGSFVSDPSNTANVSTSGLS 103 (108)
T ss_dssp CEEECCCCCTTSCEECCBEEEETTEEEEECSCCCCCCSSCS
T ss_pred CEEEeCCCCCCCEEEEEEEEEcCCCCcCCCCCEEEEeCCcc
Confidence 456689999999999999765432 33555666665443
|
| >2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.40 E-value=0.6 Score=39.51 Aligned_cols=87 Identities=13% Similarity=0.098 Sum_probs=48.5
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|..+++.-.. +++.|+|.-.....|. ...=.|+|..... .... ... ..-..
T Consensus 20 ~P~~l~~~~~~-~sv~l~W~~P~~~ng~--------i~gY~i~y~~~~~-~~~~-----~~~-------------~~~~~ 71 (116)
T 2edb_A 20 QPSSLHVRPQT-NCIIMSWTPPLNPNIV--------VRGYIIGYGVGSP-YAET-----VRV-------------DSKQR 71 (116)
T ss_dssp CCSCEEEEECS-SCEEEEECCCSCTTBC--------CCEEEEEEEESST-TSEE-----EEE-------------ETTCC
T ss_pred CCCCeEEEECC-CEEEEEEcCCCCCCCc--------eeEEEEEEEeCCC-CeEE-----EEe-------------CCCee
Confidence 68888777666 9999999754321110 0123456654221 1100 000 01224
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCCCccc--eEEEEcCC
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIPAMSA--EHVFETLP 191 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~p 191 (580)
..+|++|+|+|.|.+||...+..+.+. ...++|.+
T Consensus 72 ~~~l~~L~p~t~Y~~~V~A~n~~G~g~~~~~~~~T~~ 108 (116)
T 2edb_A 72 YYSIERLESSSHYVISLKAFNNAGEGVPLYESATTRS 108 (116)
T ss_dssp EEEECSCCSSSBEEEEEEEEETTEECSCEEECCBCCC
T ss_pred EEEeCCCCCCCEEEEEEEEEeCCccCCCCcceeeccc
Confidence 568899999999999997655333322 33455654
|
| >2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=90.39 E-value=0.86 Score=45.31 Aligned_cols=92 Identities=13% Similarity=0.030 Sum_probs=54.4
Q ss_pred CCCceEEEEeC------CCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEc-ccCCCcceEEeeEEEEEeeecccCCcc
Q 008029 76 NFPEQIALAIS------SPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYG-KQSGKYTSKRGGNATVYSQLYPFKGLL 148 (580)
Q Consensus 76 ~~P~qi~la~~------~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg-~~~~~~~~~a~g~~~~y~~~~p~~g~~ 148 (580)
..|..+.+... ..+++.|+|..... .|. ....=.|+|. ..+...+..+.- .
T Consensus 204 ~pP~~~~~~~~~~~~~~~~~~l~l~W~~p~~-~~~-------~~l~Y~v~y~~~~~~~~w~~~~~----~---------- 261 (313)
T 2d9q_B 204 EPPMLRTMDPSPEAAPPQAGCLQLSWEPWQP-GLH-------INQKCELRHKPQRGEASWALVGP----L---------- 261 (313)
T ss_dssp CCCEEEECCC-------CCSCEEEEEECCGG-GTT-------SCEEEEEEEEESSSCCCCEEEEE----E----------
T ss_pred CcCceeEEEEecccccCCCCeEEEEECCCCC-CCc-------eeEEEEEEEccCCCCCCcEEccc----c----------
Confidence 45766665543 36899999986432 111 0123457887 443332222210 0
Q ss_pred ccccccEEEEEeCCCCCCCEEEEEEEeCCC---C---CccceEEEEcCCC
Q 008029 149 NYTSGIIHHVKIDGLDPGTKYYYKCGDSKI---P---AMSAEHVFETLPL 192 (580)
Q Consensus 149 ~~~~~~~h~v~l~gL~P~T~Y~Yrvg~~~~---~---~~S~~~~F~T~p~ 192 (580)
...-+.+.|++|+|+|.|..||...+. + .||+...|+|+..
T Consensus 262 ---~~~~~~~~l~~L~p~t~Y~~rVra~~~~g~G~wS~wS~~~~~~T~~~ 308 (313)
T 2d9q_B 262 ---PLEALQYELCGLLPATAYTLQIRCIRWPLPGHWSDWSPSLELRTTER 308 (313)
T ss_dssp ---CSCEEEEEECSCCSCCCEEEEEEEEECSSCCCCCCCCCCEEECCCC-
T ss_pred ---cCcceEEEEeCCCCCCeEEEEEEeeECCCCCccCCCCCccceeCCcc
Confidence 112366789999999999999975432 2 4778889999764
|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A | Back alignment and structure |
|---|
Probab=89.55 E-value=1.1 Score=41.38 Aligned_cols=76 Identities=20% Similarity=0.135 Sum_probs=42.3
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|..+.+.-...+++.|+|.-.... +.. ...=.|+|....+...... . . .+...
T Consensus 112 ~P~~~~~~~~~~~sv~l~W~~p~~~-~~~-------i~~Y~v~~~~~~~~~~~~~-----~---~----------~~~~~ 165 (209)
T 2vkw_A 112 APKLEGQMGEDGNSIKVNLIKQDDG-GSP-------IRHYLVRYRALSSEWKPEI-----R---L----------PSGSD 165 (209)
T ss_dssp CCEEEEEECTTSSCEEEEEECCCCT-TSC-------CCEEEEEEEETTSCCCCCE-----E---E----------CTTCC
T ss_pred CCcccccccccCCeEEEEEECcccC-CCC-------CceEEEEEECCCCCCceee-----e---c----------CCCcc
Confidence 5666655544589999999864211 110 0123466665221111100 0 0 11224
Q ss_pred EEEeCCCCCCCEEEEEEEeCCC
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKI 178 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~ 178 (580)
.+.|+||+|+|.|.+||...+.
T Consensus 166 ~~~i~~L~p~t~Y~~~V~A~n~ 187 (209)
T 2vkw_A 166 HVMLKSLDWNAEYEVYVVAENQ 187 (209)
T ss_dssp EEEECSCCTTCEEEEEEEEEET
T ss_pred EEEecCCCCCCEEEEEEEEEeC
Confidence 5679999999999999976553
|
| >1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=89.43 E-value=1.7 Score=39.89 Aligned_cols=91 Identities=10% Similarity=0.096 Sum_probs=51.4
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCC-cceEEeeEEEEEeeecccCCccccccccE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGK-YTSKRGGNATVYSQLYPFKGLLNYTSGII 155 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~-~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 155 (580)
.|..+.+.- ..+++.|+|.-.... +..+ ..=.|+|...... .+...... .+ + ..
T Consensus 8 ~P~~~~~~~-~~~sv~l~W~~p~~~-~~~i-------~~Y~v~~~~~~~~~~w~~~~~~-------~~--~-------~~ 62 (205)
T 1cfb_A 8 APKLTGITC-QADKAEIHWEQQGDN-RSPI-------LHYTIQFNTSFTPASWDAAYEK-------VP--N-------TD 62 (205)
T ss_dssp CCEEEEEEE-CSSEEEEEEECCCCT-TSCC-------CEEEEEEEESSSTTCCEEEEEE-------EE--T-------TC
T ss_pred CCCCcEEEe-cCCEEEEEEECcccC-CCce-------EEEEEEEecCCCCCCceeeeec-------cC--C-------Cc
Confidence 688888888 899999999864211 1100 2235677654321 11111100 01 1 11
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCCC---Ccc-ceEEEEcCCCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKIP---AMS-AEHVFETLPLP 193 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S-~~~~F~T~p~~ 193 (580)
....+ +|+|+|.|.|||...+.. .+| ....++|.+..
T Consensus 63 ~~~~~-~L~p~t~Y~~~V~A~n~~G~~~~s~~~~~~~T~~~~ 103 (205)
T 1cfb_A 63 SSFVV-QMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPDV 103 (205)
T ss_dssp SEEEE-ECCSSEEEEEEEEEEETTEECCCCCCCCCEEECCCC
T ss_pred eEEEE-eCCCCCEEEEEEEEEECCccCCCCCCceeEEcCCcC
Confidence 23346 999999999999764422 345 45678886643
|
| >2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens} | Back alignment and structure |
|---|
Probab=88.85 E-value=1.7 Score=41.78 Aligned_cols=83 Identities=11% Similarity=0.055 Sum_probs=45.9
Q ss_pred CCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccE
Q 008029 76 NFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGII 155 (580)
Q Consensus 76 ~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 155 (580)
..|..++.+--.++++.++|...... ..+-.|-.-.+. ... ++. +..+
T Consensus 152 ~Pp~NL~At~VT~tSVtLsW~aP~~~-------------~GI~gY~ly~~g-~~v--~~v-------~~~~--------- 199 (238)
T 2w1n_A 152 NPVRDFKASEINKKNVTVTWTEPETT-------------EGLEGYILYKDG-KKV--AEI-------GKDE--------- 199 (238)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSCC-------------TTEEEEEEEETT-EEE--EEE-------ETTC---------
T ss_pred CCCCceEEEEccCCeEEEEecCCCCC-------------CCceeEEEEeCC-cee--EEe-------eccc---------
Confidence 45777776665699999999865432 123344332221 111 110 1011
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCCC---CccceEEEEcC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKIP---AMSAEHVFETL 190 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~ 190 (580)
.+-+++||+|+|.|.|||..-+.. ..++...+||.
T Consensus 200 tsyt~~gLk~~TeYsF~V~A~d~~G~~Ss~e~vtVrTl 237 (238)
T 2w1n_A 200 TSYTFKKLNRHTIYNFKIAAKYSNGEVSSKESLTLRTA 237 (238)
T ss_dssp CEEEECSCCTTCEEEEEEEEEETTSCBCCCEEEEEECC
T ss_pred eEEEecCCCCCCEEEEEEEEEeCCCCccccCcEEEEec
Confidence 124579999999999999653321 12245566664
|
| >1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=88.71 E-value=2 Score=39.36 Aligned_cols=91 Identities=12% Similarity=0.057 Sum_probs=51.1
Q ss_pred CCCceEEEEeCCCCcEEEEEEeCCC--CCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccc
Q 008029 76 NFPEQIALAISSPTSMWVSWVSGDA--QIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSG 153 (580)
Q Consensus 76 ~~P~qi~la~~~~~sm~V~W~T~~~--~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~ 153 (580)
..|..+.+.-...+++.|+|.-... .-|. ...=.|+|............ .. . ..
T Consensus 106 ~~P~~~~~~~~~~~sv~l~W~~p~~~~~ng~--------i~~Y~v~~~~~~~~~~~~~~---~~-------~------~~ 161 (205)
T 1cfb_A 106 KNPDNVVGQGTEPNNLVISWTPMPEIEHNAP--------NFHYYVSWKRDIPAAAWENN---NI-------F------DW 161 (205)
T ss_dssp CCCSCCEEECSSTTCEEEECCCCCGGGTCSS--------SCEEEEEEEESSTTCCCEEE---EE-------C------CT
T ss_pred CCCeeeEeecCCCCeEEEEEECCCccccCCC--------ceEEEEEEEECCCCCCcEEE---Ee-------c------CC
Confidence 3577777776568899999986431 1110 02235666654432111100 00 0 01
Q ss_pred cEEEEEeCCCCCCCEEEEEEEeCCCC---C-ccceEEEEcC
Q 008029 154 IIHHVKIDGLDPGTKYYYKCGDSKIP---A-MSAEHVFETL 190 (580)
Q Consensus 154 ~~h~v~l~gL~P~T~Y~Yrvg~~~~~---~-~S~~~~F~T~ 190 (580)
.....+|++|+|+|.|.+||...+.. . .|+...++|.
T Consensus 162 ~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~ss~~v~~~T~ 202 (205)
T 1cfb_A 162 RQNNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSG 202 (205)
T ss_dssp TCCEEEECSCCSSCEEEEEEEEEETTEECSSCCCCEEEESS
T ss_pred CccEEEEcCCCCCcEEEEEEEEEcCCCcCCCCCCcEEEecC
Confidence 12456789999999999999764422 2 3455666664
|
| >2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=88.58 E-value=0.17 Score=42.12 Aligned_cols=74 Identities=27% Similarity=0.343 Sum_probs=43.3
Q ss_pred CCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccE
Q 008029 76 NFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGII 155 (580)
Q Consensus 76 ~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 155 (580)
..|..+++.--..+++.|+|.-....+ ..=.|+|.......... . .. .++-.
T Consensus 9 ~~P~~l~v~~~t~~si~lsW~~p~g~i-----------~~Y~v~y~~~~~~~~~~----~----~~---------v~~~~ 60 (105)
T 2ekj_A 9 SPPSNLALASETPDSLQVSWTPPLGRV-----------LHYWLTYAPASGLGPEK----S----VS---------VPGAR 60 (105)
T ss_dssp CCCEEEEEEEEETTEEEEEEECCSSCC-----------SBBCBBCCCTTSCSCCC----C----BC---------CBTTS
T ss_pred CCCCceEEEeCCCCEEEEEEeCCCCcc-----------eEEEEEEEECCCCCccE----E----EE---------eCCCc
Confidence 358888776555899999998643110 12234555433211000 0 00 01122
Q ss_pred EEEEeCCCCCCCEEEEEEEeCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSK 177 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~ 177 (580)
..++|+||+|+|.|.++|...+
T Consensus 61 ~~~~l~~L~p~t~Y~~~V~A~~ 82 (105)
T 2ekj_A 61 SHVTLPDLQAATKYRVLVSAIY 82 (105)
T ss_dssp SEEEECSCCSSCCCBCBBCBBC
T ss_pred CEEEeCCCCCCCEEEEEEEEEe
Confidence 5678999999999999997654
|
| >2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=88.52 E-value=0.67 Score=50.13 Aligned_cols=97 Identities=19% Similarity=0.195 Sum_probs=58.0
Q ss_pred CCCCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccc
Q 008029 74 TSNFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSG 153 (580)
Q Consensus 74 ~~~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~ 153 (580)
....|..+++.-..++++.|+|.......|. ...=.|+|.......+... .... +. ..
T Consensus 386 ~P~PP~nl~v~~~s~~sl~LsW~pP~~~~g~--------~l~YeV~Yr~~~~~~w~~~----~~~~------~~----~~ 443 (488)
T 2q7n_A 386 APHDPTSLKVKDINSTVVTFSWYLPGNFTKI--------NLLCQIEICKANSKKEVRN----ATIR------GA----ED 443 (488)
T ss_dssp CCCCCEEEEEEECSTTCEEEEEEEEEECSSS--------EEEEEEEEBCTTSCCEEEE----EEEE------CC----EE
T ss_pred CCCCCeEEEEEecCCCEEEEEEeCCCCCCCc--------ceEEEEEEEECCCCCceEE----EEEe------cC----CC
Confidence 3446887877665588999999875322111 0123467776543221110 0000 00 01
Q ss_pred cEEEEEeCCCCCCCEEEEEEEeCC--C---CCccceEEEEcCCC
Q 008029 154 IIHHVKIDGLDPGTKYYYKCGDSK--I---PAMSAEHVFETLPL 192 (580)
Q Consensus 154 ~~h~v~l~gL~P~T~Y~Yrvg~~~--~---~~~S~~~~F~T~p~ 192 (580)
..+.+.|.+|+|+|+|..||.... . +.||+...|+|++.
T Consensus 444 ~~~~v~l~~L~P~T~Y~~rVRA~~~g~G~WS~WS~~v~~~T~e~ 487 (488)
T 2q7n_A 444 STYHVAVDKLNPYTAYTFRVRCSSKTFWKWSRWSDEKRHLTTEA 487 (488)
T ss_dssp EEEEEEECSCCSSCCBBCCEEEEESSCSSCCCCCCCCCBCCCCC
T ss_pred cEEEEEeCCCCCCceEEEEEEEEECCCCCCCCCcCCEeEECCCC
Confidence 246779999999999999886533 1 26778888998764
|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A | Back alignment and structure |
|---|
Probab=88.19 E-value=1.4 Score=44.36 Aligned_cols=75 Identities=21% Similarity=0.395 Sum_probs=43.7
Q ss_pred CCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccE
Q 008029 76 NFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGII 155 (580)
Q Consensus 76 ~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 155 (580)
..|..+.+.-...+++.|+|.-.... ...=.|+|....+..... .... ++-.
T Consensus 277 ~~P~~l~~~~~~~~sv~l~W~~p~~~-----------i~~Y~v~~~~~~~~~~~~----~~~~-------------~~~~ 328 (368)
T 1fnf_A 277 DVPRDLEVVAATPTSLLISWDAPAVT-----------VRYYRITYGETGGNSPVQ----EFTV-------------PGSK 328 (368)
T ss_dssp CSCEEEEEEEEETTEEEEEEECCSSC-----------CSEEEEEEEETTCCSCCE----EEEE-------------ETTC
T ss_pred CCCCeeEEEecCCCEEEEEeeCCCCc-----------cceEEEEEEECCCCCccE----EEEc-------------CCCe
Confidence 45667766554588999999753211 123346666543321110 0000 1122
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKI 178 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~ 178 (580)
...+|+||+|++.|.|+|...+.
T Consensus 329 ~~~~~~~L~p~t~Y~~~V~A~~~ 351 (368)
T 1fnf_A 329 STATISGLKPGVDYTITVYAVTG 351 (368)
T ss_dssp CEEEECSCCTTCCEEEEEEEECC
T ss_pred eEEEecCCCCCCEEEEEEEEeCC
Confidence 46788999999999999976553
|
| >2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=87.91 E-value=1.7 Score=39.93 Aligned_cols=87 Identities=16% Similarity=0.198 Sum_probs=50.2
Q ss_pred CCceEEEEeCC--CCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCC-cceEEeeEEEEEeeecccCCccccccc
Q 008029 77 FPEQIALAISS--PTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGK-YTSKRGGNATVYSQLYPFKGLLNYTSG 153 (580)
Q Consensus 77 ~P~qi~la~~~--~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~-~~~~a~g~~~~y~~~~p~~g~~~~~~~ 153 (580)
.|.++.+.--. ++++.|+|.-.. +.. ...=.|+|...... ..... .. ++
T Consensus 2 ~P~~l~v~~v~~~~~si~l~W~~p~---~~~-------i~~Y~v~~~~~~~~~~~~~~-----~~-------------~~ 53 (201)
T 2ha1_A 2 GPVEVFITETPSQPNSHPIQWNAPQ---PSH-------ISKYILRWRPKNSVGRWKEA-----TI-------------PG 53 (201)
T ss_dssp CCCEEECCSCSCCSSCEEEEEECCS---STT-------CCEEEEEEEETTCSSCCEEE-----EE-------------CT
T ss_pred CceeEEEEecCCCCCEEEEEEeCCC---CCC-------ceEEEEEEEECCCCCceEEE-----ec-------------CC
Confidence 47777765544 889999998642 111 12345677654321 11111 00 01
Q ss_pred cEEEEEeCCCCCCCEEEEEEEeCCCCCcc--ceEEEEcCC
Q 008029 154 IIHHVKIDGLDPGTKYYYKCGDSKIPAMS--AEHVFETLP 191 (580)
Q Consensus 154 ~~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S--~~~~F~T~p 191 (580)
....+.|+||+|+|.|.+||...+..+.+ ....|+|..
T Consensus 54 ~~~~~~i~~L~p~t~Y~~~V~a~n~~G~~~~~~~~~~t~~ 93 (201)
T 2ha1_A 54 HLNSYTIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTTTS 93 (201)
T ss_dssp TCCEEEECSCCTTEEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred CccEEEecCCCCCCEEEEEEEEEecccccCceeEEEecCC
Confidence 12467899999999999999875533332 245666643
|
| >3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A | Back alignment and structure |
|---|
Probab=87.18 E-value=0.61 Score=44.26 Aligned_cols=97 Identities=19% Similarity=0.196 Sum_probs=52.9
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|..+++.-...+++.|+|.-.....|. ...=.|+|....+.... .+...... .......
T Consensus 101 ~P~~l~~~~~~~~sv~l~W~~p~~~~g~--------i~~Y~v~~~~~~~~~~~--~~~~~~~~----------~~~~~~~ 160 (234)
T 3f7q_A 101 EPGRLAFNVVSSTVTQLSWAEPAETNGE--------ITAYEVCYGLVNDDNRP--IGPMKKVL----------VDNPKNR 160 (234)
T ss_dssp CCCCCEEEECSSSCEEEECCCCSCCSSC--------CCEEEEEEEEBCTTSCB--SSCCEECC----------CSCTTCC
T ss_pred CCCccEEEEecCCEEEEEEcCCCCCCCc--------eeEEEEEEEECCCCCCc--cCcceEEE----------ecCCcce
Confidence 4677777766688999999753221110 01224556554322110 00000000 0011224
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCC---Cccc-eEEEEcCCCC
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIP---AMSA-EHVFETLPLP 193 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~-~~~F~T~p~~ 193 (580)
..+|+||+|+|.|.+||...+.. .+|+ ...|+|.+..
T Consensus 161 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~T~~~~ 201 (234)
T 3f7q_A 161 MLLIENLRESQPYRYTVKARNGAGWGPEREAIINLATQPKR 201 (234)
T ss_dssp EEEEECCCTTCCEEEEEEEEETTEECCCEEEEECGGGSCCC
T ss_pred EEEeCCCCCCCeEEEEEEEECCCccCCCcCceeEeecCCCC
Confidence 67899999999999999765432 3454 4778887654
|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
Probab=87.05 E-value=3.3 Score=41.78 Aligned_cols=86 Identities=15% Similarity=0.132 Sum_probs=49.6
Q ss_pred CCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCC-CcceEEeeEEEEEeeecccCCcccccccc
Q 008029 76 NFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSG-KYTSKRGGNATVYSQLYPFKGLLNYTSGI 154 (580)
Q Consensus 76 ~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~-~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 154 (580)
..|..+.+.-...+++.|+|.-.... ...=.|+|..... ..... ... ++-
T Consensus 279 ~~P~~l~~~~~~~~sv~l~W~~p~~~-----------~~~Y~v~~~~~~~~~~~~~-----~~~-------------~~~ 329 (375)
T 3t1w_A 279 DSPTGIDFSDITANSFTVHWIAPRAT-----------ITGYRIRHHPEHFSGRPRE-----DRV-------------PHS 329 (375)
T ss_dssp CCCEEEEEESCCSSCEEEEEECCSSC-----------CSEEEEEEEETTCCSSCEE-----EEE-------------ETT
T ss_pred CCCCccEeeeccCCEEEEEECCCCcc-----------eeeEEEEEEECCCCCccee-----EEc-------------CCC
Confidence 35777776544588999999863211 1233566665543 11111 000 011
Q ss_pred EEEEEeCCCCCCCEEEEEEEeCCCCCccc--eEEEEcC
Q 008029 155 IHHVKIDGLDPGTKYYYKCGDSKIPAMSA--EHVFETL 190 (580)
Q Consensus 155 ~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~ 190 (580)
....+|+||+|+|.|.++|...+..+.|+ ...++|+
T Consensus 330 ~~~~~i~~L~p~t~Y~~~V~A~~~~G~s~p~s~~~~~~ 367 (375)
T 3t1w_A 330 RNSITLTNLTPGTEYVVSIVALNGREESPLLIGQQSTV 367 (375)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECC
T ss_pred ccEEEECCCCCCCEEEEEEEEECCCCCCCceeeeeEEe
Confidence 24568899999999999997755444443 3455554
|
| >2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A | Back alignment and structure |
|---|
Probab=86.54 E-value=0.73 Score=38.21 Aligned_cols=28 Identities=25% Similarity=0.272 Sum_probs=20.9
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCCCCccc
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKIPAMSA 183 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~ 183 (580)
..+.|+||+|||.|...|..-.....|+
T Consensus 59 ~s~~l~~L~PgT~Y~V~v~a~~~~~~S~ 86 (95)
T 2h41_A 59 TSVNIPDLLPGRKYIVNVYQISEDGEQS 86 (95)
T ss_dssp CEEEECSCCTTCEEEEEEEEEETTSCEE
T ss_pred cEEEECCCCCCCEEEEEEEEEcCCCccc
Confidence 5678999999999999887643334444
|
| >2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A | Back alignment and structure |
|---|
Probab=86.47 E-value=1.9 Score=39.76 Aligned_cols=23 Identities=13% Similarity=0.248 Sum_probs=19.3
Q ss_pred cEEEEEeCCCCCCCEEEEEEEeC
Q 008029 154 IIHHVKIDGLDPGTKYYYKCGDS 176 (580)
Q Consensus 154 ~~h~v~l~gL~P~T~Y~Yrvg~~ 176 (580)
....++|++|+|+|.|.|||...
T Consensus 68 ~~~~~~i~~L~p~t~Y~~~V~A~ 90 (214)
T 2ibg_A 68 KSFTASVTDLKPQHTYRFRILAV 90 (214)
T ss_dssp EEEEEEECSCCTTCEEEEEEEEE
T ss_pred cceeEEecCCcCCCEEEEEEEEE
Confidence 34567899999999999999764
|
| >3csg_A MBP, maltose-binding protein monobody YS1 fusion, MMBP; engineered binding protein, antibody mimic, synthetic protein interface; 1.80A {Escherichia coli} PDB: 2obg_A 3csb_A* 3a3c_A* 3d4g_A* 3d4c_A* 3ef7_A* | Back alignment and structure |
|---|
Probab=86.39 E-value=1.2 Score=47.22 Aligned_cols=74 Identities=24% Similarity=0.422 Sum_probs=45.8
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|..+++.-...+|+.++|..... |. + ..=.|+|......... .+... .+--.
T Consensus 372 ~~~~l~~~~~~~~s~~l~W~~p~~--~~-~-------~~y~v~y~~~~~~~~~-------~~~~~----------~~~~~ 424 (461)
T 3csg_A 372 VPTNLEVVAATPTSLLISWDASYS--SS-V-------SYYRITYGETGGNSPV-------QEFTV----------PGSKS 424 (461)
T ss_dssp SSCCCEEEEECSSCEEEECCCTTG--GG-C-------SEEEEEEEETTCCSCC-------EEEEE----------ETTCC
T ss_pred CCcceEEeccCCCeEEEEecCCCC--Cc-c-------eEEEEEEEECCCCccc-------eEEEe----------cCCCc
Confidence 588888887779999999975411 11 0 1334667665321100 01110 11226
Q ss_pred EEEeCCCCCCCEEEEEEEeCC
Q 008029 157 HVKIDGLDPGTKYYYKCGDSK 177 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~ 177 (580)
+++|+||+|||+|..+|....
T Consensus 425 ~~~i~~L~p~t~Y~~~v~a~~ 445 (461)
T 3csg_A 425 TATISGLSPGVDYTITVYAYS 445 (461)
T ss_dssp EEEECSCCTTCEEEEEEEEEC
T ss_pred eEEecCCCCCCEEEEEEEEEe
Confidence 789999999999999998654
|
| >1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A | Back alignment and structure |
|---|
Probab=84.92 E-value=2.9 Score=41.78 Aligned_cols=92 Identities=15% Similarity=0.156 Sum_probs=53.6
Q ss_pred CCCCceEEEEeCC--CCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCcccccc
Q 008029 75 SNFPEQIALAISS--PTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTS 152 (580)
Q Consensus 75 ~~~P~qi~la~~~--~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~ 152 (580)
...|..+.+.... ++++.|+|.-.....+. .+ ...=.|+|.......+..+. . .
T Consensus 197 P~pP~~l~v~~~~~~~~sv~lsW~~p~~~~~~-----~~-~~~Y~V~yr~~~~~~W~~~~--------~----------~ 252 (325)
T 1n26_A 197 PDPPANITVTAVARNPRWLSVTWQDPHSWNSS-----FY-RLRFELRYRAERSKTFTTWM--------V----------K 252 (325)
T ss_dssp CCCCEEEEEEECTTCTTCEEEEEECCTTCCCS-----SS-CEEEEEEEEETTCSCCEEEE--------C----------G
T ss_pred CCCCcceEEEEecCCCCEEEEEECCCCccCCC-----cE-eEEEEEEEEeCCCCCCEEEc--------c----------c
Confidence 4568888877654 57999999865321000 00 02335777665433222210 0 0
Q ss_pred ccEEEEEeCCCCCCCEEEEEEEeCCC------CCccceEEEEcC
Q 008029 153 GIIHHVKIDGLDPGTKYYYKCGDSKI------PAMSAEHVFETL 190 (580)
Q Consensus 153 ~~~h~v~l~gL~P~T~Y~Yrvg~~~~------~~~S~~~~F~T~ 190 (580)
..-....|.+|+|+|.|.+||...+. ..||+...++|.
T Consensus 253 ~~~~~~~l~~L~p~t~Y~~rVrA~n~~g~G~~S~wS~~~~~~~~ 296 (325)
T 1n26_A 253 DLQHHCVIHDAWSGLRHVVQLRAQEEFGQGEWSEWSPEAMGTPW 296 (325)
T ss_dssp GGCSEEEESSCCTTCCEEEEEEEEETTTBSCCCCCCCCEEECCC
T ss_pred CCceEEEEeCCCCCCeEEEEEEEecCCCCCCCcCCCCccceecC
Confidence 11245678999999999999976541 256666666663
|
| >3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=84.60 E-value=0.67 Score=50.06 Aligned_cols=97 Identities=15% Similarity=0.134 Sum_probs=57.6
Q ss_pred CCCCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccc
Q 008029 74 TSNFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSG 153 (580)
Q Consensus 74 ~~~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~ 153 (580)
....|..+.+....++++.|+|.......+ ....=.|+|....+..... .++ ..+.. .
T Consensus 381 kP~PP~nl~v~~~~stsl~LsW~~P~~~~~--------~~L~YeVrYr~~~~~~~~~------~vs----v~~~~----~ 438 (483)
T 3e0g_A 381 YPHTPTSFKVKDINSTAVKLSWHLPGNFAK--------INFLCEIEIKKSNSVQEQR------NVT----IQGVE----N 438 (483)
T ss_dssp CCCCCEEEEECCSSSSSCCEEEECCSCCTT--------SBCCCEEEEECSSSCCCEE------ECC----CBCCS----S
T ss_pred CCCCCeeeEEEEecCCeEEEEECCCCCCCC--------ceEEEEEEEEECCCCCceE------EEE----EeccC----C
Confidence 345677777764448899999986532111 1124568887765432110 000 01100 1
Q ss_pred cEEEEEeCCCCCCCEEEEEEEeCCC-----CCccceEEEEcCCC
Q 008029 154 IIHHVKIDGLDPGTKYYYKCGDSKI-----PAMSAEHVFETLPL 192 (580)
Q Consensus 154 ~~h~v~l~gL~P~T~Y~Yrvg~~~~-----~~~S~~~~F~T~p~ 192 (580)
-.+.+.|.+|+|+|+|..||..... ..||+...|+|+.+
T Consensus 439 ~~~s~~l~~L~PgT~Y~vrVRA~~~g~g~WSeWS~~~~f~T~E~ 482 (483)
T 3e0g_A 439 SSYLVALDKLNPYTLYTFRIRCSTETFWKWSKWSNKKQHLTTEA 482 (483)
T ss_dssp SBCCCCCCSCCSSSSCEEEEECCCSSCCCCCCCCCCCCCCCCCC
T ss_pred ceeEEEEeccCCCcEEEEEEEEeeCCCCCcCCCCCceeeECCCC
Confidence 1245678999999999999976532 25777888988653
|
| >1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A | Back alignment and structure |
|---|
Probab=84.36 E-value=1.3 Score=42.54 Aligned_cols=35 Identities=11% Similarity=0.061 Sum_probs=26.5
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCC-----CCccceEEEEcC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKI-----PAMSAEHVFETL 190 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~-----~~~S~~~~F~T~ 190 (580)
..+.|.+|+|||+|..||..... ..||+...|+|+
T Consensus 195 ~~~~l~~L~p~t~Y~vqVRa~~~~gg~ws~WS~~~~~~~p 234 (236)
T 1axi_B 195 TSVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTLP 234 (236)
T ss_dssp SEEEEEEEETTSCEEEEEEEEETTSSCCCCCCCCEEECCC
T ss_pred CEEEEeccCCCCEEEEEEEEEECCCCCcCCCCCCEEEECC
Confidence 45778999999999999976432 256777888774
|
| >3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A | Back alignment and structure |
|---|
Probab=83.01 E-value=12 Score=35.93 Aligned_cols=36 Identities=6% Similarity=-0.144 Sum_probs=24.0
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCCCC--ccceEEEEcCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKIPA--MSAEHVFETLP 191 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~~~--~S~~~~F~T~p 191 (580)
....+++|+|+|.|.+||...+..+ .+.....+|..
T Consensus 157 ~~~~~~~L~p~t~Y~~~V~A~n~~g~g~~~~~~~~t~~ 194 (290)
T 3l5i_A 157 RTYLRGNLAESKCYLITVTPVYADGPGSPESIKAYLKQ 194 (290)
T ss_dssp EEECCSCCCTTCEEEEEEEEEETTEECCCEEEEEESSC
T ss_pred ceEEecCcCCccEEEEEEEEEeCCcccccEEEEeEccc
Confidence 5567899999999999997644322 23344444543
|
| >2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C* | Back alignment and structure |
|---|
Probab=82.97 E-value=3.4 Score=38.33 Aligned_cols=88 Identities=13% Similarity=0.135 Sum_probs=53.0
Q ss_pred CCCCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccc
Q 008029 74 TSNFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSG 153 (580)
Q Consensus 74 ~~~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~ 153 (580)
....|..+++.....+.+.|+|...... ....-.|+|....+..+..+.. .
T Consensus 98 kP~pP~~l~~~~~~~~~l~l~W~~p~~~----------~~l~yev~y~~~~~~~w~~~~~-------------------~ 148 (199)
T 2b5i_C 98 IPWAPENLTLHKLSESQLELNWNNRFLN----------HCLEHLVQYRTDWDHSWTEQSV-------------------D 148 (199)
T ss_dssp ECCCCEEEEEEEEETTEEEEEEECSSCS----------TTCEEEEEEEETTCSSCEEEEE-------------------C
T ss_pred ecCCCcEEEEEECCCCCEEEEECCCCCC----------CceEEEEEEeecCCcccEEEec-------------------c
Confidence 3456888877765567999999975311 1123458888765543322110 0
Q ss_pred cEEEEEeCCCCCCCEEEEEEEeCCC------C---CccceEEEEcC
Q 008029 154 IIHHVKIDGLDPGTKYYYKCGDSKI------P---AMSAEHVFETL 190 (580)
Q Consensus 154 ~~h~v~l~gL~P~T~Y~Yrvg~~~~------~---~~S~~~~F~T~ 190 (580)
......|.+|+|++.|..||..... + .||+...|.|.
T Consensus 149 ~~~~~~l~~l~p~~~Y~vqVR~~~~~~~~~~g~WSeWS~~~~~~t~ 194 (199)
T 2b5i_C 149 YRHKFSLPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHWGSN 194 (199)
T ss_dssp SSCEEEECSCCTTSCEEEEEEEECCSSSCCCCCCCCCCCCEEC---
T ss_pred CceEEEecCCCCCcEEEEEEEEeccCCcCcCCeECCCCCCEEecCC
Confidence 1145667999999999999976541 1 46666777663
|
| >3tgx_A Interleukin-21 receptor; class I cytokine, class I cytokine receptor, sugarbridge, fibronectine domain, signaling, cytokine-cytokine receptor; HET: MAN FUL NAG BMA FUC; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=82.96 E-value=4.7 Score=38.15 Aligned_cols=105 Identities=10% Similarity=0.132 Sum_probs=57.2
Q ss_pred cCCCCCCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCcccc
Q 008029 71 KNVTSNFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNY 150 (580)
Q Consensus 71 ~~~~~~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~ 150 (580)
..+....|..+.+.. .+.+.|+|....... ....+ -....=.|+|....+.......+.. ..
T Consensus 97 ~iVkp~PP~nltv~~--~~~l~lsW~~P~~~p--~~~~~-~~~L~Yevryr~~~~~W~~~~~~~~--~~----------- 158 (219)
T 3tgx_A 97 ESIKPAPPFDVTVTF--SGQYQISWRSDYEDP--AFYML-KGKLQYELQYRNRGDPWAVSPRRKL--IS----------- 158 (219)
T ss_dssp GCBCCCCCEEEEEEE--SSSEEEEEECGGGSG--GGGGG-TTSEEEEEEEEETTSCTTSCCEEEE--EC-----------
T ss_pred eeEEeCCCCceEEEe--CCCEEEEEeCCcCCc--ccccc-ccCEEEEEEEecCCCCceeccccee--Ee-----------
Confidence 334456688777763 468999999753210 00000 0012345777766532211000110 00
Q ss_pred ccccEEEEEeCCCCCCCEEEEEEEeCCC------C---CccceEEEEcCCCC
Q 008029 151 TSGIIHHVKIDGLDPGTKYYYKCGDSKI------P---AMSAEHVFETLPLP 193 (580)
Q Consensus 151 ~~~~~h~v~l~gL~P~T~Y~Yrvg~~~~------~---~~S~~~~F~T~p~~ 193 (580)
..+.-..+.+.+|+|+|.|..||..... + .||+...|+|.+..
T Consensus 159 ~~~~~~~~~~~~L~p~t~Y~vqVRa~~~~g~~~~G~WSeWS~~~~~~T~~~~ 210 (219)
T 3tgx_A 159 VDSRSVSLLPLEFRKDSSYELQVRAGPMPGSSYQGTWSEWSDPVIFQTQSEE 210 (219)
T ss_dssp SSCSEEEECTTSSCSSCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCC--
T ss_pred cCCCEEEEEeccCCCCCEEEEEEEEeeCCCCCCCCcCcCCCCCeEEECCchh
Confidence 0123456678899999999999954321 2 46889999998753
|
| >3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens} | Back alignment and structure |
|---|
Probab=81.99 E-value=9.4 Score=37.88 Aligned_cols=37 Identities=30% Similarity=0.284 Sum_probs=28.3
Q ss_pred EEEEeCCCCCCCEEEEEEEeCC-----CCCccceEEEEcCCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSK-----IPAMSAEHVFETLPL 192 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~-----~~~~S~~~~F~T~p~ 192 (580)
..++|++|+|+|.|..+|..-. .+.+|+...++|...
T Consensus 159 ~~~~l~~L~p~t~Y~~~V~A~~~~~~g~g~~S~~~~~~T~~~ 200 (306)
T 3s98_A 159 SRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVE 200 (306)
T ss_dssp TEEEECSCCTTCEEEEEEEEEEGGGTEECCCCCCEEEECCSC
T ss_pred ceEEEccCCCCCeEEEEEEEEEccCCCCCCCCCcEeeEecCC
Confidence 3577999999999999996533 236788888888643
|
| >2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=81.78 E-value=2.8 Score=38.28 Aligned_cols=28 Identities=25% Similarity=0.272 Sum_probs=21.5
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCCCCccc
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKIPAMSA 183 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~ 183 (580)
..+.|+||+|+|.|.++|...+..+.+.
T Consensus 165 ~~~~i~~L~p~t~Y~~~V~A~~~~G~~~ 192 (201)
T 2ha1_A 165 TSVNIPDLLPGRKYIVNVYQISEDGEQS 192 (201)
T ss_dssp CEEEECSCCTTCEEEEEEEEEETTSCEE
T ss_pred eEEEeCCCCCCCEEEEEEEEEcCCCCcc
Confidence 5678999999999999997755334443
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=81.45 E-value=4 Score=44.82 Aligned_cols=80 Identities=18% Similarity=0.143 Sum_probs=49.0
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|....++-.+.+++.++|.-....=|..+ ..=.|++...++..+..+. +. . ..
T Consensus 12 pP~~P~v~~~~~~sv~L~W~~P~~DGgs~I-------~~Y~vE~~~~~~~~W~~v~-~~---~-------------~t-- 65 (573)
T 3uto_A 12 PPRFPIIENILDEAVILSWKPPALDGGSLV-------TNYTIEKREAMGGSWSPCA-KS---R-------------YT-- 65 (573)
T ss_dssp CCEEEEEEEECSSCEEEEEECCSCCSSSCC-------CEEEEEEEESSSCCCEEEE-EE---S-------------SS--
T ss_pred cCCCCEEEEeeCCEEEEEECCCCcCCCCcc-------cEEEEEEEECCCCceEEec-cc---c-------------CC--
Confidence 355555555558999999986433212111 1235677776666565542 11 0 01
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCCCcc
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIPAMS 182 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~~~S 182 (580)
..+++||.||+.|.|||...+..++|
T Consensus 66 ~~~V~~L~~g~~Y~FRV~A~N~~G~s 91 (573)
T 3uto_A 66 YTTIEGLRAGKQYEFRIIAENKHGQS 91 (573)
T ss_dssp EEEECCCCTTCEEEEEEEEEETTEEC
T ss_pred EEEeCCCCCCCcEeEEEEEEcCceEc
Confidence 24679999999999999876644444
|
| >3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=81.08 E-value=1.3 Score=40.86 Aligned_cols=39 Identities=31% Similarity=0.375 Sum_probs=28.9
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCC---CCccceEEEEcCCCCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKI---PAMSAEHVFETLPLPS 194 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~~ 194 (580)
...+|.+|+|++.|.|||...+. ..+|....|+|.|..+
T Consensus 173 ~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~T~p~~g 214 (215)
T 3mtr_A 173 GIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVQG 214 (215)
T ss_dssp TEEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEECCC---
T ss_pred ccEEECCCCCCCEEEEEEEEEeCCcccCcccceeeEeccccC
Confidence 45678999999999999976543 2467788999988654
|
| >2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A | Back alignment and structure |
|---|
Probab=81.03 E-value=12 Score=37.34 Aligned_cols=37 Identities=27% Similarity=0.456 Sum_probs=28.5
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCC---CCccceEEEEcCCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKI---PAMSAEHVFETLPL 192 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~ 192 (580)
...+|.+|+|++.|.|+|...+. ...|....|+|.+.
T Consensus 252 ~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~~~~t~~~ 291 (389)
T 2jll_A 252 TMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPV 291 (389)
T ss_dssp SEEEECSCCTTCEEEEEEEEEESSCBCCCCCCEEEECCCC
T ss_pred ceEEECCccCCCEEEEEEEEEcCCccCCCCcceEEEecCC
Confidence 45778999999999999976442 24567788998765
|
| >2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=80.92 E-value=5 Score=38.87 Aligned_cols=91 Identities=12% Similarity=0.131 Sum_probs=55.2
Q ss_pred CCCCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccc
Q 008029 74 TSNFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSG 153 (580)
Q Consensus 74 ~~~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~ 153 (580)
....|..+.+.......+.|+|...... ....-.|+|....+..+..... .
T Consensus 136 kP~PP~nl~v~~~~~~~l~l~W~~P~~~----------~~L~Yevry~~~~~~~W~~~~~-------------------~ 186 (247)
T 2erj_C 136 IPWAPENLTLHKLSESQLELNWNNRFLN----------HCLEHLVQYRTDWDHSWTEQSV-------------------D 186 (247)
T ss_dssp ECCCCEEEEEEESSSSCEEEEEECSSCC----------TTEEEEEEEECSSCSSCEEEEE-------------------C
T ss_pred EeCCCCeEEEEECCCCcEEEEECCCCCC----------CcEEEEEEEeeCCCCCCEEEec-------------------C
Confidence 3456788888766567999999975310 0112358887765543332210 0
Q ss_pred cEEEEEeCCCCCCCEEEEEEEeCC------C---CCccceEEEEcCCCC
Q 008029 154 IIHHVKIDGLDPGTKYYYKCGDSK------I---PAMSAEHVFETLPLP 193 (580)
Q Consensus 154 ~~h~v~l~gL~P~T~Y~Yrvg~~~------~---~~~S~~~~F~T~p~~ 193 (580)
......|.+|+|+++|..||.... . ..||+...|.|.+..
T Consensus 187 ~~~~~~l~~L~p~~~Y~vqVR~k~~~~~~~~g~WSeWS~~~~~~t~~~~ 235 (247)
T 2erj_C 187 YRHKFSLPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHWGSNTSK 235 (247)
T ss_dssp SSCEEEESCCCTTSCEEEEEEEEECSSSCCCCCCCCCCCCEEECC----
T ss_pred CceEEEecCCCCCCEEEEEEEEEeCCCCCCCCccCCCCcCEEEECCCCC
Confidence 113556799999999999996543 1 157778888886543
|
| >1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=80.85 E-value=6.8 Score=43.70 Aligned_cols=35 Identities=11% Similarity=0.367 Sum_probs=24.4
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCCCC----ccceEEEEcC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKIPA----MSAEHVFETL 190 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~~~----~S~~~~F~T~ 190 (580)
.+++|++|+|+|.|.|||...+..+ .+....|+|.
T Consensus 223 ~~~~i~~L~P~t~Y~frV~A~n~~G~~~~ss~s~~~~t~ 261 (680)
T 1zlg_A 223 ERVQLTDIRPSRWYQFRVAAVNVHGTRGFTAPSKHFRSS 261 (680)
T ss_pred CeEEeCCCCCCCEEEEEEEEEeCCCCCCCCCCccceEcC
Confidence 3467899999999999997654222 2344567774
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 580 | ||||
| d2qfra2 | 312 | d.159.1.1 (A:121-432) Plant purple acid phosphatas | 2e-75 | |
| d2qfra1 | 112 | b.1.12.1 (A:9-120) Purple acid phosphatase, N-term | 1e-23 | |
| d1xzwa1 | 119 | b.1.12.1 (A:1-119) Purple acid phosphatase, N-term | 8e-23 | |
| d1utea_ | 302 | d.159.1.1 (A:) Mammalian purple acid phosphatase { | 2e-18 | |
| d2nxfa1 | 320 | d.159.1.12 (A:3-322) Uncharacterized C17orf48 homo | 1e-07 | |
| d2hy1a1 | 256 | d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide pho | 2e-06 | |
| d3d03a1 | 271 | d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ | 2e-05 | |
| d1uf3a_ | 228 | d.159.1.6 (A:) Hypothetical protein TT1561 {Thermu | 9e-05 |
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 240 bits (612), Expect = 2e-75
Identities = 123/354 (34%), Positives = 169/354 (47%), Gaps = 73/354 (20%)
Query: 199 PHRIAVIGDLGLTSNSSTTVDHLIQN--DPSLILMVGDLTYANQYLTTGGKAASCYSCAF 256
P+ +IGDLG + +S+TT+ H + +L VGDL+YA++Y
Sbjct: 7 PYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRY--------------- 51
Query: 257 PDAPIRETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIEPQV---AGITFKSYLTRFAVP 313
RWD WGRF E + P + GNHEIE FK + R+ VP
Sbjct: 52 -----PNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVP 106
Query: 314 SEESGSNSNFYYSFNAGGVHFIMLGAYVDYNSTGAQYAWLKEDLHKLDRTVTPWLAAAWH 373
E S S S F+YS H I+L +Y Y QY WLK++L K+ R+ TPWL H
Sbjct: 107 YEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMH 166
Query: 374 PPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTL-------- 425
P YNSY+ H+ E E MR + EA +Y VD+VF+GHVHAYER RV N
Sbjct: 167 SPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCT 226
Query: 426 ---DACGPVYITVGDGGNIEQVDVDHADDPGKCPSAGENLPEFGGVCHLNFTSGPAKGKF 482
D PVYIT+GD GN +D +
Sbjct: 227 PVKDQSAPVYITIGDAGNYGVIDSNMIQP------------------------------- 255
Query: 483 CWSKQPEWSAYRESSFGHGILEVVNSTYALWTWHRNQDNYKEDSRGDHIYIVRQ 536
QPE+SA+RE+SFGHG+ ++ N T+A ++W+RNQD ++ D ++ +
Sbjct: 256 ----QPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEA--DSVWFFNR 303
|
| >d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 112 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 93.4 bits (232), Expect = 1e-23
Identities = 33/133 (24%), Positives = 49/133 (36%), Gaps = 24/133 (18%)
Query: 61 DLPMNHTRLKKNVTSNFPEQIALAI--SSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDV 118
D+P++ + N P+Q+ + +M +SWV+ D +S V
Sbjct: 2 DMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDE------------PGSSAV 49
Query: 119 WYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIHHVKIDGLDPGTKYYYKCGDSKI 178
Y + G + Y NY+SG IHH I L TKYYY+ G
Sbjct: 50 RYWSEKNGRKRIAKGKMSTYRFF-------NYSSGFIHHTTIRKLKYNTKYYYEVGLRN- 101
Query: 179 PAMSAEHVFETLP 191
+ F T P
Sbjct: 102 --TTRRFSFITPP 112
|
| >d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]} Length = 119 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Score = 91.5 bits (227), Expect = 8e-23
Identities = 32/137 (23%), Positives = 49/137 (35%), Gaps = 23/137 (16%)
Query: 57 RGSDDLPMNHTRLKKNVTSNFPEQIALAISS--PTSMWVSWVSGDAQIGSNVTPLDPSTV 114
D+P + N P+Q+ + + +SW + + G+N
Sbjct: 4 AEDVDMPWDSDVFAVPSGYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANK-------- 55
Query: 115 ASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIHHVKIDGLDPGTKYYYKCG 174
V+Y ++ K + G Y NYTS IHH I L+ TKYYY+ G
Sbjct: 56 ---VFYWSENSKSQKRAMGTVVTYKYY-------NYTSAFIHHCTIKDLEYDTKYYYRLG 105
Query: 175 DSKIPAMSAEHVFETLP 191
+ F T P
Sbjct: 106 FGD---AKRQFWFVTPP 119
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Score = 84.1 bits (206), Expect = 2e-18
Identities = 53/314 (16%), Positives = 85/314 (27%), Gaps = 66/314 (21%)
Query: 201 RIAVIGDLGLTSNSSTTVDHLIQN-----------DPSLILMVGDLTYANQYLTTGGKAA 249
R +GD G N+ + N IL +GD Y
Sbjct: 6 RFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGV-------- 57
Query: 250 SCYSCAFPDAPIRETYQPRWDGWGR--FMEPLTSRVPMMVIEGNHEIEP-QVAGITFKSY 306
+ R+ F +P VP V+ GNH+ A I +
Sbjct: 58 ------------HDAKDKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKI 105
Query: 307 LTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYV-----------------DYNSTGAQ 349
R+ PS F + V ML + Q
Sbjct: 106 SKRWNFPSPYYRLR--FKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQ 163
Query: 350 YAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSG 409
AW+K+ L A +P W + + C+ +++ LL + V G
Sbjct: 164 LAWIKKQLAAAKEDYVLV--AGHYPVWS---IAEHGPTHCLVKQLLPLLTTHKVTAYLCG 218
Query: 410 HVHAYERMNRVYNYTLDACGPVYITVGDGGNIEQVDVDHADDP-GKCPSAGENLPEFGGV 468
H H + + D G ++ G G ++ P G GG
Sbjct: 219 HDHNLQYLQ-------DENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGF 271
Query: 469 CHLNFTSGPAKGKF 482
++ T +
Sbjct: 272 AYVEITPKEMSVTY 285
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Score = 51.3 bits (121), Expect = 1e-07
Identities = 33/249 (13%), Positives = 58/249 (23%), Gaps = 38/249 (15%)
Query: 218 VDHLIQNDPSLILMVGDLTYANQYLTTGGKAA-----------------SCYSCAFPDAP 260
V + ++ +GD+ + A + F +
Sbjct: 42 VLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAELDACSVDVHHVWGNHEFYNFS 101
Query: 261 IRETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIE-PQVAGITFKSYLTRFAVPSEESG- 318
R + R S + I P + +Y EES
Sbjct: 102 RPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESEK 161
Query: 319 -SNSNFYYSFNAGGVHFIMLGAYVDYNSTG----------AQYAWLKEDLHKLDRTVTPW 367
++S + + + + L Q WL L D
Sbjct: 162 HTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQERV 221
Query: 368 LAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDA 427
L H P + + + L V +GH H D+
Sbjct: 222 LIF-SHLPVHPCAADPICLAWNHEAVLSVLRSHQSVLCFIAGHDHDGG-------RCTDS 273
Query: 428 CGPVYITVG 436
G +IT+
Sbjct: 274 SGAQHITLE 282
|
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 47.1 bits (110), Expect = 2e-06
Identities = 38/241 (15%), Positives = 64/241 (26%), Gaps = 58/241 (24%)
Query: 193 PSPTSYPHRIAVIGDLGLTSNSSTT-------------VDHLIQN--DPSLILMVGDLTY 237
P P + + I D L ++ L Q+ P I+ GDL
Sbjct: 1 PRPD---YVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLAD 57
Query: 238 ANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIEPQ 297
+ R ++ + GNH+
Sbjct: 58 KGEP-----------------------AAYRKLRGLVEPFAAQLGAELVWVMGNHD---- 90
Query: 298 VAGITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYVDYNSTG----AQYAWL 353
+E+ S + G+ I+L V + G +Q WL
Sbjct: 91 -------DRAELRKFLLDEAPSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLGWL 143
Query: 354 KEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHA 413
E+L T A HPP + + + +L V + +GH+H
Sbjct: 144 AEELATPAPDGTIL--ALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHY 201
Query: 414 Y 414
Sbjct: 202 S 202
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Score = 44.3 bits (103), Expect = 2e-05
Identities = 24/156 (15%), Positives = 49/156 (31%), Gaps = 11/156 (7%)
Query: 264 TYQPRWDGWGRFMEPLTS-RVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSN 322
R + + + L S P+ +I GNH+ + F YL + +N
Sbjct: 52 VNCGRPEEYQVARQILGSLNYPLYLIPGNHDDKA-----LFLEYLQPLCP--QLGSDANN 104
Query: 323 FYYSFNAGGVHFIMLGAYVDYNSTGA-QYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYS 381
+ + + + + S G + +L H P +
Sbjct: 105 MRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEAQLFEGGDKPATIFMHHPPLPLGN 164
Query: 382 SHYQEFECM-RQEMEALLYQY-GVDIVFSGHVHAYE 415
+ C + AL+ ++ + +F GH H+
Sbjct: 165 AQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLT 200
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} Length = 228 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Score = 42.0 bits (97), Expect = 9e-05
Identities = 23/254 (9%), Positives = 58/254 (22%), Gaps = 37/254 (14%)
Query: 199 PHRIAVIGDL-GLTSNSSTTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFP 257
I + G V I ++G+L
Sbjct: 5 VRYILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMP-------------------- 44
Query: 258 DAPIRETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEES 317
+ + + R + + G + + ++ P
Sbjct: 45 ----KAAKSRDYAAFFRILSEAHLPT--AYVPGPQDAP--IWEYLREAANVELVHPEMR- 95
Query: 318 GSNSNFYYSFNAGGVHFIMLG--AYVDYNSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPP 375
N + ++F G +G + + + + L
Sbjct: 96 --NVHETFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWELKDYPKIF 153
Query: 376 WYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVH-AYERMNRVYNYTLDACGPVYIT 434
+++ H E E+ L+ + +V +E + + +
Sbjct: 154 LFHTMPYHKGLNEQGSHEVAHLIKTHNPLLVLVAGKGQKHEMLGASWVVVPGDLSEGEYS 213
Query: 435 VGD--GGNIEQVDV 446
+ D +E +V
Sbjct: 214 LLDLRARKLETGNV 227
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 580 | |||
| d2qfra2 | 312 | Plant purple acid phosphatase, catalytic domain {K | 100.0 | |
| d1utea_ | 302 | Mammalian purple acid phosphatase {Pig (Sus scrofa | 99.97 | |
| d2qfra1 | 112 | Purple acid phosphatase, N-terminal domain {Kidney | 99.89 | |
| d1xzwa1 | 119 | Purple acid phosphatase, N-terminal domain {Sweet | 99.88 | |
| d2hy1a1 | 256 | Rv0805 cyclic nucleotide phosphodiesterase {Mycoba | 99.86 | |
| d2nxfa1 | 320 | Uncharacterized C17orf48 homolog zgc:64213 {Zebraf | 99.84 | |
| d3d03a1 | 271 | Glycerophosphodiesterase GpdQ {Enterobacter aeroge | 99.83 | |
| d1uf3a_ | 228 | Hypothetical protein TT1561 {Thermus thermophilus | 99.62 | |
| d2yvta1 | 257 | Uncharacterized protein Aq_1956 {Aquifex aeolicus | 99.58 | |
| d2a22a1 | 193 | Vacuolar protein sorting 29, VPS29 {Cryptosporidiu | 99.04 | |
| d1s3la_ | 165 | Putative phosphodiesterase MJ0936 {Methanococcus j | 99.01 | |
| d1z2wa1 | 182 | Vacuolar protein sorting 29, VPS29 {Mouse (Mus mus | 99.01 | |
| d1ii7a_ | 333 | Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 98.99 | |
| d3ck2a1 | 173 | Uncharacterized protein SP1879 {Streptococcus pneu | 98.9 | |
| d1nnwa_ | 251 | Hypothetical protein PF1291 {Archaeon Pyrococcus f | 98.89 | |
| d1su1a_ | 184 | Phosphodiesterase yfcE {Escherichia coli [TaxId: 5 | 98.43 | |
| d1xm7a_ | 188 | Hypothetical protein aq_1666 {Aquifex aeolicus [Ta | 98.3 | |
| d1usha2 | 337 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.2 | |
| d3c9fa2 | 322 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 97.95 | |
| d2z1aa2 | 302 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 97.8 | |
| d1x5xa1 | 96 | Fibronectin type-III domain containing protein 3a, | 97.35 | |
| d1x5aa1 | 94 | Ephrin type-A receptor 1 {Mouse (Mus musculus) [Ta | 97.18 | |
| d1x4xa1 | 93 | Fibronectin type-III domain containing protein 3a, | 97.13 | |
| d1tdqa2 | 92 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 97.07 | |
| d1x5ka1 | 111 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.98 | |
| d1qg3a1 | 92 | Integrin beta-4 subunit {Human (Homo sapiens) [Tax | 96.87 | |
| d2b5ib2 | 104 | Interleukin-2 receptor beta chain {Human (Homo sap | 96.84 | |
| d2djsa1 | 95 | Ephrin type-B receptor 1 {Human (Homo sapiens) [Ta | 96.83 | |
| d1x5la1 | 98 | Ephrin type-A receptor 8 {Human (Homo sapiens) [Ta | 96.83 | |
| d1x5fa1 | 107 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.76 | |
| d1owwa_ | 93 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.73 | |
| d1x4za1 | 108 | Brother of CDO precursor (BOC) {Mouse (Mus musculu | 96.72 | |
| d1x5ja1 | 100 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.67 | |
| d1qr4a2 | 88 | Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | 96.63 | |
| d1qr4a1 | 87 | Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | 96.55 | |
| d1x4ya1 | 101 | Brother of CDO precursor (BOC) {Mouse (Mus musculu | 96.51 | |
| d2vkwa2 | 93 | Neural cell adhesion molecule 1, NCAM {Human (Homo | 96.49 | |
| d1tena_ | 90 | Tenascin {Human (Homo sapiens) [TaxId: 9606]} | 96.48 | |
| d2ibga1 | 95 | Hedgehog receptor iHog {Fruit fly (Drosophila mela | 96.46 | |
| d2cuha1 | 102 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 96.46 | |
| d2cuia1 | 101 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 96.45 | |
| d1fnha1 | 90 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.44 | |
| d2haza1 | 101 | Neural cell adhesion molecule 1, NCAM {Human (Homo | 96.42 | |
| d2cuma1 | 93 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 96.4 | |
| d1fnfa3 | 89 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.38 | |
| d2d9qb2 | 105 | Granulocyte colony-stimulating factor (GC-SF) rece | 96.32 | |
| d1fnha3 | 89 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.29 | |
| d2crza1 | 97 | Fibronectin type-III domain containing protein 3a, | 96.27 | |
| d3d48r2 | 104 | Prolactin receptor {Human (Homo sapiens) [TaxId: 9 | 96.25 | |
| d1x5ga1 | 103 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.24 | |
| d1x5za1 | 102 | Receptor-type tyrosine-protein phosphatase delta, | 96.23 | |
| d1k85a_ | 88 | Fibronectin type III domain from chitinase A1. {Ba | 96.21 | |
| d1va9a1 | 109 | Down syndrome cell adhesion molecule-like protein | 96.21 | |
| d1fnfa1 | 94 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.19 | |
| d1tdqa1 | 93 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 96.16 | |
| d2b5ic1 | 95 | Cytokine receptor common gamma chain {Human (Homo | 96.14 | |
| d1fnfa2 | 91 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.13 | |
| d1erna2 | 105 | Erythropoietin (EPO) receptor {Human (Homo sapiens | 96.12 | |
| d1f6fb2 | 103 | Prolactin receptor {Rat (Rattus norvegicus) [TaxId | 96.1 | |
| d1j8ka_ | 94 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.08 | |
| d1uena_ | 125 | KIAA0343 protein {Human (Homo sapiens) [TaxId: 960 | 96.07 | |
| d1iarb2 | 101 | Interleukin-4 receptor alpha chain {Human (Homo sa | 95.97 | |
| d1tdqa3 | 86 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 95.95 | |
| d1x5ha1 | 119 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 95.91 | |
| d1t70a_ | 255 | Putative phosphatase DR1281 {Deinococcus radiodura | 95.89 | |
| d1fnha2 | 90 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.88 | |
| d1g5ba_ | 219 | lambda ser/thr protein phosphatase {Bacteriophage | 95.81 | |
| d1wfoa1 | 117 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 95.8 | |
| d1uc6a_ | 109 | Ciliary neurotrophic factor receptor alpha {Human | 95.74 | |
| d2z06a1 | 252 | Hypothetical protein TTHA0625 {Thermus thermophilu | 95.67 | |
| d1cd9b2 | 106 | Granulocyte colony-stimulating factor (GC-SF) rece | 95.63 | |
| d1bpva_ | 104 | Type I titin module {Human (Homo sapiens) [TaxId: | 95.62 | |
| d2fnba_ | 95 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.56 | |
| d1cfba1 | 100 | Neuroglian, two amino proximal Fn3 repeats {Drosop | 95.55 | |
| d2gysa2 | 114 | Common beta-chain in the GM-CSF, IL-3 and IL-5 rec | 95.53 | |
| d1bqua2 | 115 | Cytokine receptor gp130 cytokine-binding domains { | 95.51 | |
| d1x5ya1 | 98 | Myosin binding protein C, fast-type {Mouse (Mus mu | 95.47 | |
| d1wisa1 | 111 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 95.36 | |
| d1wf5a1 | 108 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 95.32 | |
| d1v5ja_ | 108 | KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} | 95.24 | |
| d1x3da1 | 105 | Fibronectin type-III domain containing protein 3a, | 95.24 | |
| d1wfua_ | 120 | Fibronectin type 3 and ankyrin repeat domains 1 pr | 95.21 | |
| d2ic2a1 | 107 | Hedgehog receptor iHog {Fruit fly (Drosophila mela | 95.15 | |
| d1qg3a2 | 103 | Integrin beta-4 subunit {Human (Homo sapiens) [Tax | 95.06 | |
| d1ueya_ | 127 | KIAA0343 protein {Human (Homo sapiens) [TaxId: 960 | 94.88 | |
| d1x5ia1 | 113 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 94.82 | |
| d1cfba2 | 105 | Neuroglian, two amino proximal Fn3 repeats {Drosop | 94.74 | |
| d1wk0a_ | 137 | Fibronectin type-III domain containing protein 3a, | 94.49 | |
| d2dn7a1 | 94 | Receptor-type tyrosine-protein phosphatase F, PTPR | 94.4 | |
| d2crma1 | 107 | Fibronectin type-III domain containing protein 3a, | 94.39 | |
| d1t71a_ | 281 | Hypothetical protein MPN349 {Mycoplasma pneumoniae | 94.11 | |
| d1cd9b1 | 107 | Granulocyte colony-stimulating factor (GC-SF) rece | 94.1 | |
| d1uema_ | 117 | KIAA1568 protein {Human (Homo sapiens) [TaxId: 960 | 94.08 | |
| d1n26a3 | 104 | Interleukin-6 receptor alpha chain, domains 2 and | 94.06 | |
| d1wfna1 | 106 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 93.96 | |
| d1wfta_ | 123 | Host cell factor 2, HCF-2 {Mouse (Mus musculus) [T | 93.9 | |
| d1ujta_ | 120 | KIAA1568 protein {Human (Homo sapiens) [TaxId: 960 | 93.9 | |
| d1axib2 | 106 | Growth hormone receptor {Human (Homo sapiens) [Tax | 93.48 | |
| d1fnaa_ | 91 | Fibronectin, different Fn3 modules {Human (Homo sa | 93.23 | |
| d2gysa4 | 100 | Common beta-chain in the GM-CSF, IL-3 and IL-5 rec | 89.76 | |
| d1wj3a_ | 117 | Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxI | 88.35 | |
| d2dtge2 | 196 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 88.12 | |
| d2cspa1 | 117 | Rim binding protein 2 {Human (Homo sapiens) [TaxId | 87.49 | |
| d1bqua1 | 95 | Cytokine receptor gp130 cytokine-binding domains { | 86.42 | |
| d1fyhb1 | 98 | Interferon-gamma receptor alpha chain {Human (Homo | 84.87 | |
| d2dtge1 | 102 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 84.68 | |
| d1s95a_ | 324 | Serine/threonine protein phosphatase 5, PP5 {Human | 83.7 | |
| d3d85d3 | 94 | The p40 domain of interleukin-12 (IL-12 beta chain | 82.19 | |
| d1jk7a_ | 294 | Protein phosphatase-1 (PP-1) {Human (Homo sapiens) | 81.67 | |
| d3c5wc1 | 288 | Protein phosphatase 2A catalytic subunit alpha iso | 81.43 | |
| d2dtge3 | 125 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 80.62 |
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=100.00 E-value=5.6e-57 Score=465.98 Aligned_cols=283 Identities=43% Similarity=0.786 Sum_probs=243.0
Q ss_pred CCeEEEEEcccCCCCChHHHHHHHH--HCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHHHh
Q 008029 198 YPHRIAVIGDLGLTSNSSTTVDHLI--QNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRF 275 (580)
Q Consensus 198 ~~~rfav~gD~g~~~~~~~~l~~i~--~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~~~ 275 (580)
.|+||+++||+|.+.+...++.++. ..+|||||++||++|+++... ....+|+.|++.
T Consensus 6 ~p~~F~v~GD~g~~~~~~~~~~~~~~~~~~pdfvl~~GDl~Y~~~~~~--------------------~~~~~wd~~~~~ 65 (312)
T d2qfra2 6 VPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPN--------------------HDNVRWDTWGRF 65 (312)
T ss_dssp CCEEEEEECSCCSBHHHHHHHHHHHHCSSCCSEEEECSCCCCGGGSGG--------------------GCTHHHHHHHHH
T ss_pred CCEEEEEEeeCCCCCchHHHHHHHHHcCCCCCEEEECCCCCcCCCCcc--------------------cchHHHHHHHHH
Confidence 4899999999998777677776653 468999999999999875321 124689999999
Q ss_pred hhhhccCCCeEEecCCCCCCCCc---ccccHHHHHhhcCCCCCCCCCCCcceEEEEeCcEEEEEEcCcccCCCcHHHHHH
Q 008029 276 MEPLTSRVPMMVIEGNHEIEPQV---AGITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYVDYNSTGAQYAW 352 (580)
Q Consensus 276 l~~l~~~vP~~~v~GNHD~~~~~---~~~~f~~y~~~f~~P~~~~~~~~~~yYsfd~G~v~fI~Ldt~~~~~~~~~Q~~W 352 (580)
++++.+.+|+|+++||||+.... ....|..|..+|.+|.+.+....+.||+|++|++|||+||++..+..+.+|++|
T Consensus 66 ~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~Q~~W 145 (312)
T d2qfra2 66 TERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTW 145 (312)
T ss_dssp HHHHHTTSCEEECCCGGGTCCBGGGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHH
T ss_pred HHHHhhcceEEEecccccccccccccccccccchhhhccCCccccCCCCCceEEEEECCEEEEEeeccccccchHHHHHH
Confidence 99999999999999999986432 235688999999999987777788999999999999999999888889999999
Q ss_pred HHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEEccccCceeEeecccccc-------
Q 008029 353 LKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTL------- 425 (580)
Q Consensus 353 Le~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR~~pv~n~~~------- 425 (580)
|+++|++++++++||+||++|+|+|++......+.+.+|+.|++||.+|+||++|+||+|.|||++|+++.++
T Consensus 146 L~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~Vdlv~~GH~H~YeRt~p~~~~~~~~~~~~~ 225 (312)
T d2qfra2 146 LKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLC 225 (312)
T ss_dssp HHHHHHTCCTTTCCEEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCCC
T ss_pred HHHHHHHHhhcCCCEEEEEccccccccCCCCcccchhHHHHHHHHHHHcCcEEEEEccCcceEEEeeccCCcccccCCcc
Confidence 9999999988899999999999999987666566778899999999999999999999999999999987653
Q ss_pred ----CCCCcEEEEeCCCCccccccCCCCCCCCCCCCCCCCCCcccceeecccccCCCCCCcCCCCCCCcceeeecCccEE
Q 008029 426 ----DACGPVYITVGDGGNIEQVDVDHADDPGKCPSAGENLPEFGGVCHLNFTSGPAKGKFCWSKQPEWSAYRESSFGHG 501 (580)
Q Consensus 426 ----~~~G~vyIv~G~gG~~e~~~~~~~~~~~~~p~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~p~~sa~~~~~~G~~ 501 (580)
+++|++||++|+||+.++.... +.+++|+||+||+.+|||+
T Consensus 226 ~~~~~~~g~vyiv~G~gG~~~~~~~~-----------------------------------~~~~~~~~s~~~~~~~G~~ 270 (312)
T d2qfra2 226 TPVKDQSAPVYITIGDAGNYGVIDSN-----------------------------------MIQPQPEYSAFREASFGHG 270 (312)
T ss_dssp SCEECTTSCEEEEECCSCTTSCCCCC-----------------------------------BCSSCCTTEEEEECCCEEE
T ss_pred ccccCCCcCEEEEECcCCCccccccc-----------------------------------ccCCCCCeeEEEecCCCEE
Confidence 5789999999999987654311 1246799999999999999
Q ss_pred EEEEEcCcceEEEEEEccCCCCCCccceEEEEEeCC
Q 008029 502 ILEVVNSTYALWTWHRNQDNYKEDSRGDHIYIVRQP 537 (580)
Q Consensus 502 ~l~v~n~t~~~~~~~~~~~~~~~~~v~d~~~i~k~~ 537 (580)
+|+|+|+|||.|+|+++.|+.. .+.|+|||+|+-
T Consensus 271 ~l~v~n~t~l~~~~~~~~d~~~--~~~D~~~i~~~~ 304 (312)
T d2qfra2 271 MFDIKNRTHAHFSWNRNQDGVA--VEADSVWFFNRH 304 (312)
T ss_dssp EEEECSSSEEEEEEEESSSCTT--CCSEEEEEECTT
T ss_pred EEEEEcCCeEEEEEEECCCCCE--EeeeEEEEEeCC
Confidence 9999999999999999999822 135999999994
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.97 E-value=1.6e-31 Score=269.24 Aligned_cols=260 Identities=21% Similarity=0.294 Sum_probs=178.9
Q ss_pred CeEEEEEcccCCCCCh-----------HHHHHHHHHCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHH
Q 008029 199 PHRIAVIGDLGLTSNS-----------STTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQP 267 (580)
Q Consensus 199 ~~rfav~gD~g~~~~~-----------~~~l~~i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~ 267 (580)
++||+++||+|...+. ..+.+.+.+.+|||||++||++|.++.. ..++.
T Consensus 4 ~~~F~vigD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfvl~~GD~vy~~g~~--------------------~~~~~ 63 (302)
T d1utea_ 4 ILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVH--------------------DAKDK 63 (302)
T ss_dssp CEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCS--------------------STTCT
T ss_pred CeEEEEEecCCCCCCcccccHHHHHHHHHHHHHHhhCCCCEEEECCCCCCCCCCC--------------------cccHH
Confidence 5899999999876442 1223444557999999999999975421 12234
Q ss_pred HHHHHHHhh--hhhccCCCeEEecCCCCCCCCccc-ccHHHHHhhcCCCCCCCCCCCcceEEEEe------CcEEEEEEc
Q 008029 268 RWDGWGRFM--EPLTSRVPMMVIEGNHEIEPQVAG-ITFKSYLTRFAVPSEESGSNSNFYYSFNA------GGVHFIMLG 338 (580)
Q Consensus 268 ~wd~~~~~l--~~l~~~vP~~~v~GNHD~~~~~~~-~~f~~y~~~f~~P~~~~~~~~~~yYsfd~------G~v~fI~Ld 338 (580)
+|..+.+.+ .....++|+++++||||+...... ..+..+..++.+|. .||++.+ +.++|+++|
T Consensus 64 ~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~ld 135 (302)
T d1utea_ 64 RFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFPS--------PYYRLRFKIPRSNVSVAIFMLD 135 (302)
T ss_dssp HHHHHTTTTSCSGGGTTCCEEECCCHHHHHSCHHHHHHGGGTSTTEECCS--------SSEEEEEECTTSSCEEEEEECC
T ss_pred HHHHHHHHHhhhhhhcCCceEEeecccccccccccccchhhccccccCCC--------cccceeecccCCCCcEEEEEcc
Confidence 566554332 234578999999999998643211 11222333344443 4677764 479999999
Q ss_pred Cccc-----------------CCCcHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhc
Q 008029 339 AYVD-----------------YNSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQY 401 (580)
Q Consensus 339 t~~~-----------------~~~~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky 401 (580)
+... .....+|++||+++|++. +.+|+|+++|+|+|+.... ......+..|.+||.++
T Consensus 136 t~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~WL~~~L~~~---~~~~~iv~~h~~~~~~~~~--~~~~~~~~~~~~ll~~~ 210 (302)
T d1utea_ 136 TVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAAA---KEDYVLVAGHYPVWSIAEH--GPTHCLVKQLLPLLTTH 210 (302)
T ss_dssp HHHHHCCGGGSTTCSCCSCSCHHHHHHHHHHHHHHHHHC---CCSEEEEECSSCSSCCSSS--CCCHHHHHHTHHHHHHT
T ss_pred ceeEeecccccccccccccccchhHHHHHHHHHHHHHhh---ccCceEEEEeccccccCCC--CCchhhhhhhhHHHHhc
Confidence 7421 012578999999999984 4689999999999986533 33456788999999999
Q ss_pred CCcEEEEccccCceeEeeccccccCCCCcEEEEeCCCCccccccCCCCCCCCCCCCCCCCCCcccceeecccccCCCCCC
Q 008029 402 GVDIVFSGHVHAYERMNRVYNYTLDACGPVYITVGDGGNIEQVDVDHADDPGKCPSAGENLPEFGGVCHLNFTSGPAKGK 481 (580)
Q Consensus 402 ~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyIv~G~gG~~e~~~~~~~~~~~~~p~~~~~~~~~gg~~~~~~~~~~~~~~ 481 (580)
+|+++|+||+|.|+|+. .++++.||++|+||......... ...|
T Consensus 211 ~v~~~~~GH~H~~~r~~-------~~~~~~~i~~g~g~~~~~~~~~~----~~~~------------------------- 254 (302)
T d1utea_ 211 KVTAYLCGHDHNLQYLQ-------DENGLGFVLSGAGNFMDPSKKHL----RKVP------------------------- 254 (302)
T ss_dssp TCSEEEECSSSSEEEEE-------CTTCCEEEEECBSSCCCCCCTTG----GGSC-------------------------
T ss_pred CceEEEeCCCcceEEEe-------cCCccEEEEeCCCCCCCCCcccc----ccCC-------------------------
Confidence 99999999999999986 46889999999988753221100 0000
Q ss_pred cCCCCCCCcc-eeeecCccEEEEEEEcCcceEEEEEEccCCCCCCccceEEEEEeC
Q 008029 482 FCWSKQPEWS-AYRESSFGHGILEVVNSTYALWTWHRNQDNYKEDSRGDHIYIVRQ 536 (580)
Q Consensus 482 ~~~~~~p~~s-a~~~~~~G~~~l~v~n~t~~~~~~~~~~~~~~~~~v~d~~~i~k~ 536 (580)
...+.+. ......+||++++| +.+.++++|+.. +| ++.|++.|.|.
T Consensus 255 ---~~~~~~~~~~~~~~~gf~~~~v-~~~~l~~~~~~~-~G----~~~~~~~~~~~ 301 (302)
T d1utea_ 255 ---NGYLRFHFGAENSLGGFAYVEI-TPKEMSVTYIEA-SG----KSLFKTKLPRR 301 (302)
T ss_dssp ---TTCEEEEECCTTSCCEEEEEEE-CSSCEEEEEEET-TS----CEEEEEEECCC
T ss_pred ---CcccceeecccCCcceEEEEEE-ECCEEEEEEEeC-CC----CEEEEEEecCC
Confidence 0112222 22346789999999 888999999864 66 38899998664
|
| >d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.89 E-value=3.9e-23 Score=179.74 Aligned_cols=109 Identities=30% Similarity=0.503 Sum_probs=94.1
Q ss_pred CCCCCCcccccCCCCCCCceEEEEeCC--CCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEE
Q 008029 61 DLPMNHTRLKKNVTSNFPEQIALAISS--PTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVY 138 (580)
Q Consensus 61 ~~~~~~p~~~~~~~~~~P~qi~la~~~--~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y 138 (580)
|+|..+...+.|+..++|+||||++++ +++|+|+|+|.+.. ..+.|+||++++.+...+.|.+..|
T Consensus 2 ~~p~~~~~~~~p~~~~~P~qvhlt~~~~~~tsm~VsW~T~~~~------------~~~~V~yg~~~~~~~~~a~~~~~~~ 69 (112)
T d2qfra1 2 DMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEP------------GSSAVRYWSEKNGRKRIAKGKMSTY 69 (112)
T ss_dssp BCCTTSGGGCCCCSTTCCEEEEEEECSSSSSCEEEEEEESSSC------------CCCEEEEEESSSCCCEEEECEEECC
T ss_pred CCCCCCccccCCCCCCCCccEEEeCcCCCCCEEEEEEECCCCC------------CCcEEEEEECCCCCCcEEEEEEEEE
Confidence 788888888888889999999999998 68999999996531 4689999999999999999987665
Q ss_pred eeecccCCccccccccEEEEEeCCCCCCCEEEEEEEeCCCCCccceEEEEcCC
Q 008029 139 SQLYPFKGLLNYTSGIIHHVKIDGLDPGTKYYYKCGDSKIPAMSAEHVFETLP 191 (580)
Q Consensus 139 ~~~~p~~g~~~~~~~~~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~~~F~T~p 191 (580)
.. .++.++++|+|+|+||+|+|+||||||++ +||++++|+|+|
T Consensus 70 ~~-------~~~~~~~~h~v~Lt~L~P~T~Y~YrVG~~---~~S~~~~F~T~P 112 (112)
T d2qfra1 70 RF-------FNYSSGFIHHTTIRKLKYNTKYYYEVGLR---NTTRRFSFITPP 112 (112)
T ss_dssp BC-------SSCBCCEEEEEEECSCCTTCEEEEEECCS---SSCEEEEEECCC
T ss_pred Ee-------cccCCcEEEEEEECCCCCCCEEEEEECCC---CceeeEEEEcCC
Confidence 32 13456899999999999999999999864 599999999987
|
| >d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Probab=99.88 E-value=8.7e-23 Score=179.44 Aligned_cols=112 Identities=28% Similarity=0.458 Sum_probs=96.2
Q ss_pred CCCCCCCCcccccCCCCCCCceEEEEeCC--CCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEE
Q 008029 59 SDDLPMNHTRLKKNVTSNFPEQIALAISS--PTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNAT 136 (580)
Q Consensus 59 ~~~~~~~~p~~~~~~~~~~P~qi~la~~~--~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~ 136 (580)
+.|+|...+.+..+.....|+||||++++ .++|+|+|+|..... ..+.|+||++++.+...+.|++.
T Consensus 6 ~~~~p~~~~~~~~p~~~~~P~qvhl~~~~~~~tsm~VsW~T~~~~~-----------~~~~V~yG~~~~~~~~~a~g~s~ 74 (119)
T d1xzwa1 6 DVDMPWDSDVFAVPSGYNAPQQVHITQGDYEGRGVIISWTTPYDKA-----------GANKVFYWSENSKSQKRAMGTVV 74 (119)
T ss_dssp HHBCCTTCGGGCCCCSTTCCEEEEEEECSSSSSCEEEEEEESSCCT-----------TTTEEEEEETTCCCCEEEECEEE
T ss_pred ccccCCCCccccCCCCCCCCCEEEEEecCCCCCEEEEEEECCCCCC-----------CCCEEEEcCCCCCCccEEEEEEE
Confidence 35899999999998888999999999998 689999999964321 35799999999999999999887
Q ss_pred EEeeecccCCccccccccEEEEEeCCCCCCCEEEEEEEeCCCCCccceEEEEcCC
Q 008029 137 VYSQLYPFKGLLNYTSGIIHHVKIDGLDPGTKYYYKCGDSKIPAMSAEHVFETLP 191 (580)
Q Consensus 137 ~y~~~~p~~g~~~~~~~~~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~~~F~T~p 191 (580)
+|... +++++++|+|+|+||+|+|+||||||++ +||++++|||+|
T Consensus 75 ~~~~~-------~~~~~~~H~v~LtgL~P~T~Y~YrVG~~---~~S~~~~F~T~P 119 (119)
T d1xzwa1 75 TYKYY-------NYTSAFIHHCTIKDLEYDTKYYYRLGFG---DAKRQFWFVTPP 119 (119)
T ss_dssp CCEET-------TEECCEEEEEEECCCCTTCEEEEEECCG---GGCEEEEEECCC
T ss_pred Eeecc-------cccCCeEEEEEECCCCCCCEEEEEECCC---CccceEEEeCCC
Confidence 76532 3557899999999999999999999975 599999999987
|
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.86 E-value=9.4e-21 Score=187.17 Aligned_cols=193 Identities=18% Similarity=0.190 Sum_probs=127.8
Q ss_pred CeEEEEEcccCCCCC---------h----HHHHHHHHH--CCCCEEEEcccccccccccccCCCCCcccccCCCCCcccc
Q 008029 199 PHRIAVIGDLGLTSN---------S----STTVDHLIQ--NDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRE 263 (580)
Q Consensus 199 ~~rfav~gD~g~~~~---------~----~~~l~~i~~--~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e 263 (580)
.|||++++|+|.... . .++++++.+ .+|||||++||++... .
T Consensus 4 ~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~pD~vl~~GDl~~~g-------~---------------- 60 (256)
T d2hy1a1 4 DYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKG-------E---------------- 60 (256)
T ss_dssp SEEEEEECCCCBC----------CHHHHHHHHHHHHHHHTCCCSEEEECSCCBSSC-------C----------------
T ss_pred CEEEEEEeeCccCCCCcccccCcCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCC-------C----------------
Confidence 599999999997532 1 234455544 4799999999999531 1
Q ss_pred ccHHHHHHHHHhhhhhc--cCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCCCCCCCcceEEEEeCcEEEEEEcCcc
Q 008029 264 TYQPRWDGWGRFMEPLT--SRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYV 341 (580)
Q Consensus 264 ~y~~~wd~~~~~l~~l~--~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsfd~G~v~fI~Ldt~~ 341 (580)
...++.+.+.+.++. .++|+++++||||.. . .+...+.... ......+|++..++++|++||+..
T Consensus 61 --~~~~~~~~~~l~~~~~~~~~p~~~v~GNHD~~-----~---~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ldt~~ 127 (256)
T d2hy1a1 61 --PAAYRKLRGLVEPFAAQLGAELVWVMGNHDDR-----A---ELRKFLLDEA---PSMAPLDRVCMIDGLRIIVLDTSV 127 (256)
T ss_dssp --HHHHHHHHHHHHHHHHHHTCEEEECCCTTSCH-----H---HHHHHTTCCC---CCCSCCCEEEEETTEEEEECCCBC
T ss_pred --hhHHHHHHHHhhhhhhhcCCCEEEEcccccch-----h---hhhhhhcccc---ccccccceEEEecccceeeeeeee
Confidence 123444444444332 268999999999952 1 2223232111 123456789999999999999865
Q ss_pred cC----CCcHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcch-hHHHHHHHHHHHHhcCCcEEEEccccCcee
Q 008029 342 DY----NSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQE-FECMRQEMEALLYQYGVDIVFSGHVHAYER 416 (580)
Q Consensus 342 ~~----~~~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~-~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR 416 (580)
.. ....+|++||++.|++.. ...+|+++|+|++......... ....++.+.+++++++|+++|+||+|...+
T Consensus 128 ~~~~~g~~~~~~~~wl~~~L~~~~---~~~~iv~~Hhpp~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~GH~H~~~~ 204 (256)
T d2hy1a1 128 PGHHHGEIRASQLGWLAEELATPA---PDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTN 204 (256)
T ss_dssp TTCSSBCCCHHHHHHHHHHHTSCC---TTCEEEECSSCSSCCSSHHHHTTSBCCHHHHHHHHTTSSEEEEEECSSSSCEE
T ss_pred cCCcCCcccHHHHHHHHHHHHhhh---ccCceeeeecCCcccccccccccccccHHHHHHHHhccCceEEEccccchhhc
Confidence 32 246899999999998753 2347888898887653211000 001246788899999999999999997665
Q ss_pred EeeccccccCCCCcEEEEeCCC
Q 008029 417 MNRVYNYTLDACGPVYITVGDG 438 (580)
Q Consensus 417 ~~pv~n~~~~~~G~vyIv~G~g 438 (580)
.. -+|+.++++|+.
T Consensus 205 ~~--------~~gi~~~~~~s~ 218 (256)
T d2hy1a1 205 AT--------FVGIPVSVASAT 218 (256)
T ss_dssp EE--------ETTEEEEECCCC
T ss_pred eE--------ECCEEEEEcCCc
Confidence 42 357888877653
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Probab=99.84 E-value=1.2e-20 Score=187.75 Aligned_cols=205 Identities=19% Similarity=0.174 Sum_probs=132.5
Q ss_pred eEEEEEcccCCCCC--------------------hHHHHHHHHHCCCCEEEEcccccccccccccCCCCCcccccCCCCC
Q 008029 200 HRIAVIGDLGLTSN--------------------SSTTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDA 259 (580)
Q Consensus 200 ~rfav~gD~g~~~~--------------------~~~~l~~i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~ 259 (580)
|||++++|+|.+.. ..+.++.+.+.+|||||++||+++....
T Consensus 4 f~f~~isD~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~i~~~~~DfVv~~GDl~~~~~~------------------ 65 (320)
T d2nxfa1 4 FTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNR------------------ 65 (320)
T ss_dssp EEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHH------------------
T ss_pred EEEEEEecCCCCCCCCccccccccchhhHHHHHHHHHHHHHHhhCCCCEEEECCCCCCCCCc------------------
Confidence 89999999997521 1234556667899999999999964211
Q ss_pred ccccccHHHHHHHHHhhhhhccCCCeEEecCCCCCCCCcccccHHHHHhhcC--------CCCCCCCCCCcceEEEEeCc
Q 008029 260 PIRETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFA--------VPSEESGSNSNFYYSFNAGG 331 (580)
Q Consensus 260 p~~e~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~--------~P~~~~~~~~~~yYsfd~G~ 331 (580)
..+.....|+.+.+.++.+ .+|++.++||||........ ....... ......+......+.+..++
T Consensus 66 -~~~~~~~~~~~~~~~~~~~--~~p~~~v~GNHD~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (320)
T d2nxfa1 66 -RRDASDRALDTVMAELDAC--SVDVHHVWGNHEFYNFSRPS---LLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPN 139 (320)
T ss_dssp -HTTCHHHHHHHHHHHHHTT--CSEEEECCCHHHHHHCCHHH---HHTSTTCCCC------CEECGGGTCCCEEEEEETT
T ss_pred -chhHHHHHHHHHHHHHHHc--CCCEEEecccCccccccchh---cccccccchhhhcccccccccCCCCccceeecCCC
Confidence 0111223445555555443 79999999999975321110 0000000 00001112233556778899
Q ss_pred EEEEEEcCcccC----------------------------------------------CCcHHHHHHHHHHHHhccCCCC
Q 008029 332 VHFIMLGAYVDY----------------------------------------------NSTGAQYAWLKEDLHKLDRTVT 365 (580)
Q Consensus 332 v~fI~Ldt~~~~----------------------------------------------~~~~~Q~~WLe~~L~~~~r~~~ 365 (580)
++|+.+++.... ..+.+|++||++.|+++.++.
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~- 218 (320)
T d2nxfa1 140 FRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQ- 218 (320)
T ss_dssp EEEEECCTTSBCSSSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHHHT-
T ss_pred eEEEEecCcccccccccccccccccccceeeecccccceecccccccccccccccccccccHHHHHHHHHHHHhhhhcC-
Confidence 999999863210 125889999999999865433
Q ss_pred CeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhc-CCcEEEEccccCceeEeeccccccCCCCcEEEEeCC
Q 008029 366 PWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQY-GVDIVFSGHVHAYERMNRVYNYTLDACGPVYITVGD 437 (580)
Q Consensus 366 pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky-~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyIv~G~ 437 (580)
.++|+++|+|++........ .....+++.++|.+| +|+++|+||+|..++.. ..+|+.||+.|+
T Consensus 219 ~~viv~~H~p~~~~~~~~~~-~~~~~~~~~~~l~~~~~V~~v~~GH~H~~~~~~-------~~~g~~~i~~~~ 283 (320)
T d2nxfa1 219 ERVLIFSHLPVHPCAADPIC-LAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCT-------DSSGAQHITLEG 283 (320)
T ss_dssp CEEEEEESSCCCTTSSCGGG-SCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEE-------CTTSCEEEECCC
T ss_pred CceEEEECCCCccCCCCCcc-chhhHHHHHHHHHhCCCeeEEEeCCcCCcCeee-------ccCCCEEEECCe
Confidence 46899999999865443211 112256788899999 59999999999987654 467899998765
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Probab=99.83 E-value=1.7e-19 Score=180.07 Aligned_cols=194 Identities=18% Similarity=0.271 Sum_probs=128.4
Q ss_pred eEEEEEcccCCCCC---------h----HHHHHHHHH--CCCCEEEEcccccccccccccCCCCCcccccCCCCCccccc
Q 008029 200 HRIAVIGDLGLTSN---------S----STTVDHLIQ--NDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRET 264 (580)
Q Consensus 200 ~rfav~gD~g~~~~---------~----~~~l~~i~~--~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~ 264 (580)
|||++++|+|.... . .++++++.+ .+||+||++||+++.. .
T Consensus 1 M~i~hiSD~Hl~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~D~vv~~GDl~~~~-------~----------------- 56 (271)
T d3d03a1 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCG-------R----------------- 56 (271)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSC-------C-----------------
T ss_pred CEEEEEecCcCCCCccccccCcCHHHHHHHHHHHHHhcCCCCCEEEECcccCcCC-------c-----------------
Confidence 68999999997421 1 234555543 4899999999999631 1
Q ss_pred cHHHHHHHHHhhhhhccCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCCCCCCCcceEEEEeCcEEEEEEcCcccC-
Q 008029 265 YQPRWDGWGRFMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYVDY- 343 (580)
Q Consensus 265 y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsfd~G~v~fI~Ldt~~~~- 343 (580)
...|+.+.+.++++ .+|+++++||||.. ..+..+...+. +. .........|.++.++++||+||+....
T Consensus 57 -~~~y~~~~~~l~~l--~~p~~~i~GNHD~~-----~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~i~ldt~~~~~ 126 (271)
T d3d03a1 57 -PEEYQVARQILGSL--NYPLYLIPGNHDDK-----ALFLEYLQPLC-PQ-LGSDANNMRCAVDDFATRLLFIDSSRAGT 126 (271)
T ss_dssp -HHHHHHHHHHHTTC--SSCEEEECCTTSCH-----HHHHHHHGGGS-GG-GCSCGGGCCEEECSSSSEEEECCCCCTTC
T ss_pred -chhHHHHHHHHhcc--CCCEEEEecCccch-----HHHHHHhhhhh-hc-cccccCcceEEEecCCeEEEecccccCCC
Confidence 23455666777766 79999999999973 22222222211 10 0012234668888899999999986432
Q ss_pred ---CCcHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcch-hHHHHHHHHHHHHhc-CCcEEEEccccCceeEe
Q 008029 344 ---NSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQE-FECMRQEMEALLYQY-GVDIVFSGHVHAYERMN 418 (580)
Q Consensus 344 ---~~~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~-~~~~r~~l~~Ll~ky-~VdlvlsGH~H~yeR~~ 418 (580)
....+|++||++.|++.. +.+ +|+++|+|++......... ....+++|.++|.++ +|+++|+||+|......
T Consensus 127 ~~~~l~~~ql~wL~~~L~~~~--~~~-~iv~~Hh~p~~~~~~~~d~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~~ 203 (271)
T d3d03a1 127 SKGWLTDETISWLEAQLFEGG--DKP-ATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMTQ 203 (271)
T ss_dssp SSBCCCHHHHHHHHHHHHHHT--TSC-EEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEEE
T ss_pred CcceecHHHHHHHHHHHhhhc--cce-eEEEeccCccccCccccccccccchHHHHHHHHhcCCeEEEEeCCcchhhceE
Confidence 346899999999999853 334 6677777776554332111 111246788999998 69999999999866653
Q ss_pred eccccccCCCCcEEEEeCCC
Q 008029 419 RVYNYTLDACGPVYITVGDG 438 (580)
Q Consensus 419 pv~n~~~~~~G~vyIv~G~g 438 (580)
-+|+.++++.+.
T Consensus 204 --------~~g~~~~~~pst 215 (271)
T d3d03a1 204 --------YRQALISTLPGT 215 (271)
T ss_dssp --------ETTEEEEECCCS
T ss_pred --------ECCEEEEEcCCc
Confidence 357777665443
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Probab=99.62 E-value=4.3e-15 Score=141.43 Aligned_cols=178 Identities=11% Similarity=0.055 Sum_probs=112.4
Q ss_pred CeEEEEEcccCCCCCh-HHHHHHHHHCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHHHhhh
Q 008029 199 PHRIAVIGDLGLTSNS-STTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRFME 277 (580)
Q Consensus 199 ~~rfav~gD~g~~~~~-~~~l~~i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~~~l~ 277 (580)
+-+|+++||.|..... .+.++.+.+.++|+|+++||++... .. ..++..+.+.+.
T Consensus 5 ~~~i~~~sd~hg~~eale~~~~~~~~~~~D~vv~~GDl~~~~-------~~-----------------~~~~~~~~~~L~ 60 (228)
T d1uf3a_ 5 VRYILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPKA-------AK-----------------SRDYAAFFRILS 60 (228)
T ss_dssp CCEEEEEECCTTCHHHHHHHHTHHHHHTCSEEEEESCSSCTT-------CC-----------------HHHHHHHHHHHG
T ss_pred ccEEEEEeCCCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCC-------cc-----------------chHHHHhhhhhc
Confidence 4589999999986443 4455556667999999999998431 10 123444555555
Q ss_pred hhccCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCCCCCCCcceEEEEeCcEEEEEEcCcccC----------CCcH
Q 008029 278 PLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYVDY----------NSTG 347 (580)
Q Consensus 278 ~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsfd~G~v~fI~Ldt~~~~----------~~~~ 347 (580)
.+ .+|+++++||||...... ....+......+.. ......+.+..+++.++.++..... ....
T Consensus 61 ~~--~~pv~~i~GNHD~~~~~~--~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (228)
T d1uf3a_ 61 EA--HLPTAYVPGPQDAPIWEY--LREAANVELVHPEM---RNVHETFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPA 133 (228)
T ss_dssp GG--CSCEEEECCTTSCSHHHH--HHHHHHHHHHCTTE---EECBTSEEEETTTEEEEEECSEEESSSCCBSSSSCEEEH
T ss_pred cc--cceEEEEecCCCchhhhh--hhhhcccccccccc---cccceeeeeccCCEEEEecCCccccCcCcchhhhhhhhH
Confidence 54 789999999999742110 00111111111100 0112235677788888888753221 1257
Q ss_pred HHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEEccccCce
Q 008029 348 AQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYE 415 (580)
Q Consensus 348 ~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~ye 415 (580)
.|.+|+++.++... ..+.|+++|.|++........ ...+.+++++++++++++||+|..+
T Consensus 134 ~~~~~l~~~l~~~~---~~~~il~~H~p~~~~~~~~~~-----~~~~~~~~~~~~~~lvl~GH~H~~~ 193 (228)
T d1uf3a_ 134 WVAEYRLKALWELK---DYPKIFLFHTMPYHKGLNEQG-----SHEVAHLIKTHNPLLVLVAGKGQKH 193 (228)
T ss_dssp HHHHHHHGGGGGSC---SCCEEEEESSCBCBTTTBTTS-----BHHHHHHHHHHCCSEEEECCSSCEE
T ss_pred HHHHHHHHHHhhcc---CCceEEEEeeeccCccccccc-----cHHHHHHHHhcCCcEEEEcccccch
Confidence 88999999888753 234788889988765433222 1356778889999999999999743
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Probab=99.58 E-value=1.2e-14 Score=140.57 Aligned_cols=218 Identities=12% Similarity=0.192 Sum_probs=114.2
Q ss_pred CeEEEEEcccCCCCCh-HHHHHHHHHCCCCEEEEcccccccccccccCCCCCcccccCCCCCcc---cccc-HHHHHHHH
Q 008029 199 PHRIAVIGDLGLTSNS-STTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPI---RETY-QPRWDGWG 273 (580)
Q Consensus 199 ~~rfav~gD~g~~~~~-~~~l~~i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~---~e~y-~~~wd~~~ 273 (580)
|.||++++|+|..... .+.++.+.+.+||+||++||+++.... +.. ...-+.....+..-+ ...+ ....+.+.
T Consensus 2 ~~ri~~isD~h~~~~~l~~l~~~~~~~~~D~vli~GDl~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~n~d~~~~~~~~ 79 (257)
T d2yvta1 2 PRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEAL-EKE-YERAHLARREPNRKVIHENEHYIIETLDKFF 79 (257)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHHHCCSEEEEESCCCCCHHH-HHH-HHHHHHTTCCCCTHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHhhcCCCEEEEecccCCCCCC-CHH-HHHHHHhhhhhceeeeccccccchhhHHHHH
Confidence 5799999999977554 445666677899999999999964210 000 000000000000000 0000 00112222
Q ss_pred HhhhhhccCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCCCCCCCcceEEEEeCcEEEEEEcCcccCC---------
Q 008029 274 RFMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYVDYN--------- 344 (580)
Q Consensus 274 ~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsfd~G~v~fI~Ldt~~~~~--------- 344 (580)
+.+.. ..+|+++++||||..... .....+......+.. ......+.+..+++.|+.++......
T Consensus 80 ~~L~~--~~~pv~~i~GNHD~~~~~--~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (257)
T d2yvta1 80 REIGE--LGVKTFVVPGKNDAPLKI--FLRAAYEAETAYPNI---RVLHEGFAGWRGEFEVIGFGGLLTEHEFEEDFVLK 152 (257)
T ss_dssp HHHHT--TCSEEEEECCTTSCCHHH--HHHHHHHTTTTCTTE---EECSSEEEEETTTEEEEEECSEEESSCCBSSSSCE
T ss_pred HHHHh--cCCcEEEEeCCCcchhhH--HHHHhcccccccccc---ccccceeEEecCCeEEEEeccccCCccccchhhhh
Confidence 33332 378999999999964211 111222221111110 01122344556778888876542211
Q ss_pred CcHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcch--hHHHHHHHHHHHHhcCCcEEEEccccCceeEeeccc
Q 008029 345 STGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQE--FECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYN 422 (580)
Q Consensus 345 ~~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~--~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR~~pv~n 422 (580)
....+.+|++..+++. +....|+++|+|++.+....... .......+..++++++++++++||+|.....
T Consensus 153 ~~~~~~~~~~~~~~~~---~~~~~Il~~H~pp~~~~~~~~~~~~~~~g~~~l~~~l~~~~~~~~~~GHiH~~~~~----- 224 (257)
T d2yvta1 153 YPRWYVEYILKFVNEL---KPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVGKGHEL----- 224 (257)
T ss_dssp EEHHHHHHHGGGGGGS---CCCEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSCCEEEE-----
T ss_pred hhhhHHHHHHHHhhhc---ccccEEEEEccccccccccccccchhhhhhHHHHHhhhhcCCcEEEEEeecCCeEe-----
Confidence 1234445555555542 33458999999987654322111 0111356888899999999999999974321
Q ss_pred cccCCCCcEEEEeCC
Q 008029 423 YTLDACGPVYITVGD 437 (580)
Q Consensus 423 ~~~~~~G~vyIv~G~ 437 (580)
.+++.++..|+
T Consensus 225 ----~g~~~~~~pGs 235 (257)
T d2yvta1 225 ----VGNTIVVNPGE 235 (257)
T ss_dssp ----ETTEEEEECCB
T ss_pred ----cCCeEEEECCc
Confidence 24555665553
|
| >d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Cryptosporidium parvum [TaxId: 5807]
Probab=99.04 E-value=4.7e-09 Score=98.33 Aligned_cols=142 Identities=14% Similarity=0.279 Sum_probs=84.7
Q ss_pred EEEEEcccCCCCCh---HHHHHHH-HHCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHHHhh
Q 008029 201 RIAVIGDLGLTSNS---STTVDHL-IQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRFM 276 (580)
Q Consensus 201 rfav~gD~g~~~~~---~~~l~~i-~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~~~l 276 (580)
-|+++||+|....+ ...+.++ ...++|.|+|+||++.. ...+.+
T Consensus 5 lIlviSD~H~~~~~~~l~~~~~~~~~~~~vD~ii~~GDi~~~--------------------------------~~l~~l 52 (193)
T d2a22a1 5 LVLLIGDLKIPYGAKELPSNFRELLATDKINYVLCTGNVCSQ--------------------------------EYVEML 52 (193)
T ss_dssp EEEEECCCCTTTTCSSCCGGGHHHHHCTTCCEEEECSCCCCH--------------------------------HHHHHH
T ss_pred EEEEEeCCCCCcccchhhHHHHHHhccCCCCEEEECCCCCCH--------------------------------HHHHHH
Confidence 48999999975332 1233444 45689999999999821 112334
Q ss_pred hhhccCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCCCCCCCcceEEEEeCcEEEEEEcCcccCCCcHHHHHHHHHH
Q 008029 277 EPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYVDYNSTGAQYAWLKED 356 (580)
Q Consensus 277 ~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsfd~G~v~fI~Ldt~~~~~~~~~Q~~WLe~~ 356 (580)
+.+ ..+++.|.||||........ .+.. .+| ....+..++
T Consensus 53 ~~l--~~~v~~V~GN~D~~~~~~~~---~~~~--~lp---------~~~~~~~~~------------------------- 91 (193)
T d2a22a1 53 KNI--TKNVYIVSGDLDSAIFNPDP---ESNG--VFP---------EYVVVQIGE------------------------- 91 (193)
T ss_dssp HHH--CSCEEECCCTTCCSCCBCCG---GGTB--CCC---------SEEEEEETT-------------------------
T ss_pred Hhh--CCCEEEEcCCCCcchhhhhH---HHHh--hCC---------ccEEEEECC-------------------------
Confidence 444 34688999999975322111 1111 112 223333333
Q ss_pred HHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEEccccCceeEeeccccccCCCCcEEEEeC
Q 008029 357 LHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDACGPVYITVG 436 (580)
Q Consensus 357 L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyIv~G 436 (580)
+.|.+.|...+.... . .+.+..++.+.++|++++||+|...... -+|.++|..|
T Consensus 92 ----------~~i~l~H~~~~~~~~----~----~~~l~~~~~~~~~dvvi~GHTH~~~~~~--------~~g~~~iNPG 145 (193)
T d2a22a1 92 ----------FKIGLMHGNQVLPWD----D----PGSLEQWQRRLDCDILVTGHTHKLRVFE--------KNGKLFLNPG 145 (193)
T ss_dssp ----------EEEEEECSTTSSSTT----C----HHHHHHHHHHHTCSEEEECSSCCCEEEE--------ETTEEEEECC
T ss_pred ----------EEEEEEeccCCCCCC----C----HHHHHHHHhhcCCCEEEEcCccCceEEE--------ECCEEEEECC
Confidence 345555543332211 1 2456677888899999999999864432 3688889889
Q ss_pred CCCcc
Q 008029 437 DGGNI 441 (580)
Q Consensus 437 ~gG~~ 441 (580)
+.|..
T Consensus 146 Svg~p 150 (193)
T d2a22a1 146 TATGA 150 (193)
T ss_dssp CSSCC
T ss_pred CCCcC
Confidence 87753
|
| >d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Putative phosphodiesterase MJ0936 species: Methanococcus jannaschii [TaxId: 2190]
Probab=99.01 E-value=8.4e-10 Score=100.73 Aligned_cols=141 Identities=14% Similarity=0.114 Sum_probs=86.0
Q ss_pred eEEEEEcccCCCCC-hHHHHHHHHHCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHHHhhhh
Q 008029 200 HRIAVIGDLGLTSN-SSTTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRFMEP 278 (580)
Q Consensus 200 ~rfav~gD~g~~~~-~~~~l~~i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~~~l~~ 278 (580)
|||+++||+|.... ..++++.+.+.++|.|+++||++... . .+.+..
T Consensus 1 MkI~iiSDiHgn~~al~~vl~~~~~~~~D~ii~~GD~~~~~----------------------------~----~~~l~~ 48 (165)
T d1s3la_ 1 MKIGIMSDTHDHLPNIRKAIEIFNDENVETVIHCGDFVSLF----------------------------V----IKEFEN 48 (165)
T ss_dssp CEEEEECCCTTCHHHHHHHHHHHHHSCCSEEEECSCCCSTH----------------------------H----HHHGGG
T ss_pred CEEEEEEeCCCCHHHHHHHHHHHHhcCCCEEEECCCccCHH----------------------------H----HHHHhh
Confidence 69999999997533 24566777788999999999998320 1 122222
Q ss_pred hccCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCCCCCCCcceEEEEeCcEEEEEEcCcccCCCcHHHHHHHHHHHH
Q 008029 279 LTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYVDYNSTGAQYAWLKEDLH 358 (580)
Q Consensus 279 l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsfd~G~v~fI~Ldt~~~~~~~~~Q~~WLe~~L~ 358 (580)
...|++.+.||||..... ............ .-+....+..+
T Consensus 49 --~~~~~~~v~GN~D~~~~~----~~~~~~~~~~~~-----~~~~~~~~~~~---------------------------- 89 (165)
T d1s3la_ 49 --LNANIIATYGNNDGERCK----LKEWLKDINEEN-----IIDDFISVEID---------------------------- 89 (165)
T ss_dssp --CSSEEEEECCTTCCCHHH----HHHHHHHHCTTC-----EEESEEEEEET----------------------------
T ss_pred --cCccEEEEcccccccchh----hhHhhhhhcccc-----cCChhhceEEC----------------------------
Confidence 257899999999974211 000011110000 00111122211
Q ss_pred hccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEEccccCceeEeeccccccCCCCcEEEEeCCC
Q 008029 359 KLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDACGPVYITVGDG 438 (580)
Q Consensus 359 ~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyIv~G~g 438 (580)
...|++.|.+++ ..+..++.+.++|++++||+|..... .-+|.++|..|+-
T Consensus 90 -------~~~i~l~Hg~~~--------------~~~~~~~~~~~~d~v~~GHtH~~~~~--------~~~~~~~iNPGSv 140 (165)
T d1s3la_ 90 -------DLKFFITHGHHQ--------------SVLEMAIKSGLYDVVIYGHTHERVFE--------EVDDVLVINPGEC 140 (165)
T ss_dssp -------TEEEEEEESCCH--------------HHHHHHHHHSCCSEEEEECSSCCEEE--------EETTEEEEECCCS
T ss_pred -------CcEEEEEECCcc--------------cHHHHHhhcCCCCEEEECCcCcceEE--------EECCEEEEECCCC
Confidence 135777886532 23456677889999999999974332 2368899999987
Q ss_pred Cc
Q 008029 439 GN 440 (580)
Q Consensus 439 G~ 440 (580)
|.
T Consensus 141 g~ 142 (165)
T d1s3la_ 141 CG 142 (165)
T ss_dssp SC
T ss_pred CC
Confidence 75
|
| >d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.01 E-value=8.9e-09 Score=95.59 Aligned_cols=134 Identities=20% Similarity=0.340 Sum_probs=83.9
Q ss_pred eEEEEEcccCCCCCh---HHHHHHH-HHCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHHHh
Q 008029 200 HRIAVIGDLGLTSNS---STTVDHL-IQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRF 275 (580)
Q Consensus 200 ~rfav~gD~g~~~~~---~~~l~~i-~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~~~ 275 (580)
|||+++||+|..... .+.+.++ ...++|.|+|+||++.. ...+.
T Consensus 1 MkI~viSD~H~~~~~~~l~~~~~~~~~~~~~D~Ii~~GDi~~~--------------------------------e~l~~ 48 (182)
T d1z2wa1 1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTK--------------------------------ESYDY 48 (182)
T ss_dssp CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCSEEEECSCCBSH--------------------------------HHHHH
T ss_pred CEEEEEeecCCCCcchhhHHHHHHHhcccCCCEEEEccCccch--------------------------------hhHHH
Confidence 689999999976433 2334443 34579999999999821 11233
Q ss_pred hhhhccCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCCCCCCCcceEEEEeCcEEEEEEcCcccCCCcHHHHHHHHH
Q 008029 276 MEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYVDYNSTGAQYAWLKE 355 (580)
Q Consensus 276 l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsfd~G~v~fI~Ldt~~~~~~~~~Q~~WLe~ 355 (580)
++.+ ..|++.|.||||... .+|. .-.++.++
T Consensus 49 l~~~--~~~v~~V~GN~D~~~--------------~~p~---------~~~~~~~g------------------------ 79 (182)
T d1z2wa1 49 LKTL--AGDVHIVRGDFDENL--------------NYPE---------QKVVTVGQ------------------------ 79 (182)
T ss_dssp HHHH--CSEEEECCCTTCCCT--------------TSCS---------EEEEEETT------------------------
T ss_pred HHhh--CCceEEEeCCcCccc--------------ccce---------EEEEEEcC------------------------
Confidence 4433 357899999999641 1221 11122221
Q ss_pred HHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEEccccCceeEeeccccccCCCCcEEEEe
Q 008029 356 DLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDACGPVYITV 435 (580)
Q Consensus 356 ~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyIv~ 435 (580)
+.|.+.|.+.+.... . .+.+..++.+.++|++++||+|...-.. -+|.++|..
T Consensus 80 -----------~~i~~~Hg~~~~~~~----~----~~~l~~~~~~~~~divi~GHTH~p~~~~--------~~~~~~iNP 132 (182)
T d1z2wa1 80 -----------FKIGLIHGHQVIPWG----D----MASLALLQRQFDVDILISGHTHKFEAFE--------HENKFYINP 132 (182)
T ss_dssp -----------EEEEEECSCCCCBTT----C----HHHHHHHHHHHSSSEEECCSSCCCEEEE--------ETTEEEEEC
T ss_pred -----------cEEEEEeCCCCCCCC----C----HHHHHHHHhccCCCEEEECCcCcceEEE--------ECCEEEEeC
Confidence 356666765443321 1 2355667778899999999999864332 358889999
Q ss_pred CCCCcc
Q 008029 436 GDGGNI 441 (580)
Q Consensus 436 G~gG~~ 441 (580)
|+.|..
T Consensus 133 GSv~~p 138 (182)
T d1z2wa1 133 GSATGA 138 (182)
T ss_dssp CCTTCC
T ss_pred CCCCCC
Confidence 987653
|
| >d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DNA double-strand break repair nuclease domain: Mre11 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=98.99 E-value=5.3e-10 Score=111.49 Aligned_cols=74 Identities=22% Similarity=0.387 Sum_probs=49.2
Q ss_pred eEEEEEcccCCCCCh--------------HHHHHHHHHCCCCEEEEcccccccccccccCCCCCcccccCCCCCcccccc
Q 008029 200 HRIAVIGDLGLTSNS--------------STTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETY 265 (580)
Q Consensus 200 ~rfav~gD~g~~~~~--------------~~~l~~i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y 265 (580)
|||++++|+|.+... ..+++.+.+.++|+||++||+++.. . +..+
T Consensus 1 Mkilh~SDlHlG~~~~~~~~~~~~~~~~l~~iv~~a~~~~~D~vli~GDlfd~~-------~------------~~~~-- 59 (333)
T d1ii7a_ 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSS-------R------------PSPG-- 59 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSS-------S------------CCHH--
T ss_pred CEEEEEecCcCCCCCcCchhHHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCC-------C------------CCHH--
Confidence 699999999986431 1234444568999999999998531 1 1111
Q ss_pred HHHHHHHHHhhhhhc-cCCCeEEecCCCCCCC
Q 008029 266 QPRWDGWGRFMEPLT-SRVPMMVIEGNHEIEP 296 (580)
Q Consensus 266 ~~~wd~~~~~l~~l~-~~vP~~~v~GNHD~~~ 296 (580)
....+.+.++.+. .++|+++++||||...
T Consensus 60 --~~~~~~~~~~~l~~~~i~v~~i~GNHD~~~ 89 (333)
T d1ii7a_ 60 --TLKKAIALLQIPKEHSIPVFAIEGNHDRTQ 89 (333)
T ss_dssp --HHHHHHHHHHHHHTTTCCEEEECCTTTCCS
T ss_pred --HHHHHHHHHhhHHhcCCcEEEeCCCCcccc
Confidence 1233344455443 4799999999999864
|
| >d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Uncharacterized protein SP1879 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=98.90 E-value=3.8e-08 Score=90.38 Aligned_cols=58 Identities=12% Similarity=0.098 Sum_probs=39.8
Q ss_pred EEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEEccccCceeEeeccccccCCCCcEEEEeCCCCcc
Q 008029 368 LAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDACGPVYITVGDGGNI 441 (580)
Q Consensus 368 vIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vyIv~G~gG~~ 441 (580)
.|.+.|...+..... ...+..++.+.++|++++||+|...... .+|+++|..|+-|..
T Consensus 76 ~~~~~Hg~~~~~~~~--------~~~l~~~~~~~~~dvvi~GHTH~p~~~~--------~~~~~~iNPGSvg~p 133 (173)
T d3ck2a1 76 KIIQTHGHLFDINFN--------FQKLDYWAQEEEAAICLYGHLHVPSAWL--------EGKILFLNPGSISQP 133 (173)
T ss_dssp EEEEECSGGGTTTTC--------SHHHHHHHHHTTCSEEECCSSCCEEEEE--------ETTEEEEEECCSSSC
T ss_pred EEEEEeCcCCCCCCC--------HHHHHHHHHhcCCCEEEeCCcCcceEEE--------ECCEEEEECCCCCCC
Confidence 456666554443211 1245667778899999999999754432 368999999998863
|
| >d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Phosphoesterase-related domain: Hypothetical protein PF1291 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=98.89 E-value=8.2e-10 Score=105.93 Aligned_cols=190 Identities=9% Similarity=-0.018 Sum_probs=91.8
Q ss_pred eEEEEEcccCCCCCh-HHHHHHHHH-----CCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHH
Q 008029 200 HRIAVIGDLGLTSNS-STTVDHLIQ-----NDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWG 273 (580)
Q Consensus 200 ~rfav~gD~g~~~~~-~~~l~~i~~-----~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~ 273 (580)
++|+++||+|..... .++++.+.+ .++|.++++||+++.. . .-.+..
T Consensus 1 v~I~visDiHg~~~~l~~~l~~i~~~~~~~~~~D~ii~~GDlvd~G-------~--------------------~~~evi 53 (251)
T d1nnwa_ 1 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLF-------P--------------------YPKEVI 53 (251)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSS-------S--------------------CHHHHH
T ss_pred CEEEEEEccccCHHHHHHHHHHHHHhhccCCCCcEEEEecCcCCCC-------C--------------------CcHHHH
Confidence 489999999965322 344454432 2569999999999531 1 002234
Q ss_pred HhhhhhccCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCCCCCCCcceEEEEeCcEEEEEEcCcccCCCcHHHHHHH
Q 008029 274 RFMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEESGSNSNFYYSFNAGGVHFIMLGAYVDYNSTGAQYAWL 353 (580)
Q Consensus 274 ~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsfd~G~v~fI~Ldt~~~~~~~~~Q~~WL 353 (580)
+.+..+..+.++++++||||... ..+......+... ...+ ..+.... .+ .+.......++.+||
T Consensus 54 ~~l~~l~~~~~v~~v~GNHD~~~-------~~~~~~~~~~~~~----~~~~---~~~~~~~-~~-~~~~~~~~~~~~~~l 117 (251)
T d1nnwa_ 54 EVIKDLTKKENVKIIRGKYDQII-------AMSDPHATDPGYI----DKLE---LPGHVKK-AL-KFTWEKLGHEGREYL 117 (251)
T ss_dssp HHHHHHHHHSCEEEECCHHHHHH-------HHSCTTCSSSGGG----GGSS---CCHHHHH-HH-HHHHHHHHHHHHHHH
T ss_pred HHHHHHhhcCCEEEEeccHHHHH-------Hhccccccccchh----hhhc---cchhHHH-hh-HHHhhhcCHHHHHHH
Confidence 44555555568999999999521 0000000000000 0000 0000000 00 000001134455565
Q ss_pred HHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhc-CCcEEEEccccCceeEeeccccccCCCCcEE
Q 008029 354 KEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQY-GVDIVFSGHVHAYERMNRVYNYTLDACGPVY 432 (580)
Q Consensus 354 e~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky-~VdlvlsGH~H~yeR~~pv~n~~~~~~G~vy 432 (580)
++...........-.+++.|.++........... .....+...+... +++++++||+|.-.... .++..+
T Consensus 118 ~~~~~~~~~~~~~~~~~~~H~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~vv~GHtH~~~~~~--------~~~~~~ 188 (251)
T d1nnwa_ 118 RDLPIYLVDKIGGNEVFGVYGSPINPFDGEVLAE-QPTSYYEAIMRPVKDYEMLIVASPMYPVDAM--------TRYGRV 188 (251)
T ss_dssp HTSCSCEEEEETTEEEEEESSCSSCTTTCCCCSS-CCHHHHHHHHGGGTTSSEEEESTTCSEEEEE--------ETTEEE
T ss_pred HhcccceEEeeCCCcEEEEecCccCcccchhhhh-hHHHHHhhhcccccCceEEEEeccceEEEEE--------eeeeec
Confidence 4432221111112256777876654432211110 0112233334444 68999999999744332 357888
Q ss_pred EEeCCCCcc
Q 008029 433 ITVGDGGNI 441 (580)
Q Consensus 433 Iv~G~gG~~ 441 (580)
|..|+-|..
T Consensus 189 in~Gsvg~~ 197 (251)
T d1nnwa_ 189 VCPGSVGFP 197 (251)
T ss_dssp EEECCSSSC
T ss_pred ccccccccc
Confidence 988988763
|
| >d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Phosphodiesterase yfcE species: Escherichia coli [TaxId: 562]
Probab=98.43 E-value=4e-07 Score=83.31 Aligned_cols=38 Identities=11% Similarity=0.274 Sum_probs=29.7
Q ss_pred eEEEEEcccCCCCCh-HHHHHHHHHCCCCEEEEcccccc
Q 008029 200 HRIAVIGDLGLTSNS-STTVDHLIQNDPSLILMVGDLTY 237 (580)
Q Consensus 200 ~rfav~gD~g~~~~~-~~~l~~i~~~~pDfvl~~GDl~Y 237 (580)
+||+++||+|..... .++++.+.+.++|.++++||++.
T Consensus 2 Mki~iiSDiHg~~~al~~vl~~~~~~~~D~iv~~GDiv~ 40 (184)
T d1su1a_ 2 MKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLN 40 (184)
T ss_dssp CEEEEECCCTTBHHHHHHHHHHHHHHTCSEEEECSCCSC
T ss_pred cEEEEEeecCCCHHHHHHHHHHHhhcCCCEEEEcCcccc
Confidence 699999999965322 44556566679999999999984
|
| >d1xm7a_ d.159.1.8 (A:) Hypothetical protein aq_1666 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Hypothetical protein aq 1666 domain: Hypothetical protein aq 1666 species: Aquifex aeolicus [TaxId: 63363]
Probab=98.30 E-value=7e-06 Score=75.89 Aligned_cols=45 Identities=18% Similarity=0.304 Sum_probs=34.0
Q ss_pred EEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEEccccCce
Q 008029 368 LAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYE 415 (580)
Q Consensus 368 vIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~ye 415 (580)
.|+++|.|+.......+. .....+..+..+++++++|+||+|...
T Consensus 108 ~i~l~H~P~~~~~~~~~~---~~~~~~~~~~~~~~~~~~lhGH~H~~~ 152 (188)
T d1xm7a_ 108 RILLSHYPAKDPITERYP---DRQEMVREIYFKENCDLLIHGHVHWNR 152 (188)
T ss_dssp EEEEESSCSSCSSCCSCH---HHHHHHHHHHHHTTCSEEEECCCCCCS
T ss_pred EEEEEeCCCccccccccc---cchhHHHHHHHhcCceEEEEeeccCCc
Confidence 789999998665433222 234577788999999999999999754
|
| >d1usha2 d.159.1.2 (A:26-362) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.20 E-value=7.8e-06 Score=82.47 Aligned_cols=186 Identities=17% Similarity=0.101 Sum_probs=97.5
Q ss_pred CCeEEEEEcccCCCCC--------h---HHHHHHHH----HCCCC-EEEEcccccccccccccCCCCCcccccCCCCCcc
Q 008029 198 YPHRIAVIGDLGLTSN--------S---STTVDHLI----QNDPS-LILMVGDLTYANQYLTTGGKAASCYSCAFPDAPI 261 (580)
Q Consensus 198 ~~~rfav~gD~g~~~~--------~---~~~l~~i~----~~~pD-fvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~ 261 (580)
+.++|+..+|+|.... . ...++.+. +.+++ ++|.+||+.....+
T Consensus 7 ~~ltILhtnD~Hg~l~~~~~~~~g~a~~~~~i~~~r~~~~~~~~~~l~ldaGD~~~gs~~-------------------- 66 (337)
T d1usha2 7 YKITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPE-------------------- 66 (337)
T ss_dssp EEEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCSSSCHH--------------------
T ss_pred eEEEEEEEeecccCCcCCCCCCcCHHHHHHHHHHHHHHHHhcCCCEEEEECCCCcccCHH--------------------
Confidence 4689999999996421 1 12344443 34565 66669999843211
Q ss_pred ccccHHHHHHHHHhhhhhccCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCC-------CC-CCCcceEEEEeCcEE
Q 008029 262 RETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEE-------SG-SNSNFYYSFNAGGVH 333 (580)
Q Consensus 262 ~e~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~-------~~-~~~~~yYsfd~G~v~ 333 (580)
...+ +.....+.|+.+ ..- ..++||||+... ...+..+.....+|.-. .+ ..-..|.-++.++++
T Consensus 67 s~~~--~g~~~~~~mn~~--g~D-a~~~GNHEfd~G--~~~l~~~~~~~~~p~l~aN~~~~~~~~~~~~py~I~~~~g~k 139 (337)
T d1usha2 67 SDLQ--DAEPDFRGMNLV--GYD-AMAIGNHEFDNP--LTVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLK 139 (337)
T ss_dssp HHTT--TTHHHHHHHHHH--TCC-EEECCGGGGSSC--HHHHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEE
T ss_pred HHHh--CChHHHHHHHhc--CCe-EEEechhhhccc--hHHHHHHHHhcCceEeeccccccccccccccceeeeecCCeE
Confidence 1111 122334455544 222 466899998533 33455555555555211 11 123456677888865
Q ss_pred E--EEEcCccc-------------CCCcHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHH
Q 008029 334 F--IMLGAYVD-------------YNSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALL 398 (580)
Q Consensus 334 f--I~Ldt~~~-------------~~~~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll 398 (580)
+ |.+-+... +....+..+...++|++. .+...+|++.|.+............ ....+...+
T Consensus 140 VgviG~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~--~~~D~iI~lsH~G~~~d~~~~~~~~--~~~~la~~~ 215 (337)
T d1usha2 140 IAVIGLTTDDTAKIGNPEYFTDIEFRKPADEAKLVIQELQQT--EKPDIIIAATHMGHYDNGEHGSNAP--GDVEMARAL 215 (337)
T ss_dssp EEEEEEECTTTTTSSSCCCCTTEEECCHHHHHHHHHHHHHHH--TCCSEEEEEEESCCCGGGCCTTSCC--CHHHHHHHS
T ss_pred EEeecccccccccccCcccccCcccccHHHHHHHHHHHHhhc--cCCCEEEEecccCcccccccccccc--hhHHHHHhC
Confidence 5 55533110 011223333333445432 3467899999998754322110000 012333333
Q ss_pred HhcCCcEEEEccccCc
Q 008029 399 YQYGVDIVFSGHVHAY 414 (580)
Q Consensus 399 ~ky~VdlvlsGH~H~y 414 (580)
...+||+++.||.|..
T Consensus 216 ~~~~vD~IvgGHsH~~ 231 (337)
T d1usha2 216 PAGSLAMIVGGHSQDP 231 (337)
T ss_dssp CTTSSSEEECCSSCCB
T ss_pred cccCceEEecCccCcc
Confidence 4458999999999975
|
| >d3c9fa2 d.159.1.2 (A:16-337) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Candida albicans [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Candida albicans [TaxId: 5476]
Probab=97.95 E-value=3.1e-05 Score=77.42 Aligned_cols=180 Identities=17% Similarity=0.219 Sum_probs=88.6
Q ss_pred CeEEEEEcccCCCCC--------------hHHHHHHH----HHCCCC-EEEEcccccccccccccCCCCCcccccCCCCC
Q 008029 199 PHRIAVIGDLGLTSN--------------SSTTVDHL----IQNDPS-LILMVGDLTYANQYLTTGGKAASCYSCAFPDA 259 (580)
Q Consensus 199 ~~rfav~gD~g~~~~--------------~~~~l~~i----~~~~pD-fvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~ 259 (580)
.++|++.+|+|.... ..+.+.++ .+.+++ +++.+||+.........
T Consensus 11 ~l~iLhtnD~Hg~l~~~~~~~~~~~~~gg~a~~~~~~~~~~~~~~~~~llldaGD~~~Gt~~~~~--------------- 75 (322)
T d3c9fa2 11 DINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDI--------------- 75 (322)
T ss_dssp SEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHS---------------
T ss_pred EEEEEEEeccccCCCCccccccccCccccHHHHHHHHHHHHHhcCCCEEEEECCccCCCCchhhh---------------
Confidence 589999999996421 11222222 235676 56679999964322100
Q ss_pred ccccccHHHHHHHHHhhhhhccCCCe-EEecCCCCCCCCccc-ccHHHHHhhcCCCCCCC--------C---CCCcceEE
Q 008029 260 PIRETYQPRWDGWGRFMEPLTSRVPM-MVIEGNHEIEPQVAG-ITFKSYLTRFAVPSEES--------G---SNSNFYYS 326 (580)
Q Consensus 260 p~~e~y~~~wd~~~~~l~~l~~~vP~-~~v~GNHD~~~~~~~-~~f~~y~~~f~~P~~~~--------~---~~~~~yYs 326 (580)
+..+.....+.| ..+++ .+++||||+...... ..+......+.+|.-.+ + .....|..
T Consensus 76 -----~~~~G~~~~~~m----n~lgyDa~t~GNHEfd~g~~~l~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~~~y~i 146 (322)
T d3c9fa2 76 -----TSPNGLKSTPIF----IKQDYDLLTIGNHELYLWENSKQEYETVVNHFQDKYVCSNVDIRLDNGLFVPLGLKYKY 146 (322)
T ss_dssp -----SSSTTTTTHHHH----TTSCCSEECCCGGGSSSHHHHHHHHHHHHHHTTTTBBCSSEEEECTTSCEEESSBSCEE
T ss_pred -----cccCChHHHHHH----hccCCcEEeecceecccchHHHHHHHHHHHhcCCCEEeeeEEecCCCCcccccCCceEE
Confidence 000001112233 33454 678899998532111 12223334444443111 1 12345666
Q ss_pred EEeC--cEEEEEEcCcccCCC------cHH-----HHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHH
Q 008029 327 FNAG--GVHFIMLGAYVDYNS------TGA-----QYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQE 393 (580)
Q Consensus 327 fd~G--~v~fI~Ldt~~~~~~------~~~-----Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~ 393 (580)
+..+ ++.++.+........ ... +..|+++.+ +.+...+|++.|.++.... .+.....
T Consensus 147 ~~~~~~~i~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~D~IV~l~H~g~~~d~----~~~~~~~-- 216 (322)
T d3c9fa2 147 FTTPIRGIRVMAFGFLFDFKRFNSGTRVTPMAETIHEPWFQEAL----KHEVDLIIIVGHTPISHNW----GEFYQVH-- 216 (322)
T ss_dssp EECTTTCCEEEEEECCCCCCCCCTTEEECCHHHHTTSHHHHHHT----TSCCSEEEEECSSCCCTTT----CHHHHHH--
T ss_pred EEECCCcEEEEEEeeccccccCCCCcEEeCHHHHHHHHHHHHHH----hCCCCEEEEEecCCccccc----cccchHH--
Confidence 6765 577887765332211 011 123443333 2456789999998864331 1111112
Q ss_pred HHHHHHhc-CC-cEEEEccccC
Q 008029 394 MEALLYQY-GV-DIVFSGHVHA 413 (580)
Q Consensus 394 l~~Ll~ky-~V-dlvlsGH~H~ 413 (580)
..+.+.. ++ +++|.||+|.
T Consensus 217 -~~la~~~~~~~~~iigGHsH~ 237 (322)
T d3c9fa2 217 -QYLRQFFPDTIIQYFGGHSHI 237 (322)
T ss_dssp -HHHHHHCTTSEEEEEECSSCC
T ss_pred -HHHHHhCCCCCEEEecccccc
Confidence 2222232 34 4689999996
|
| >d2z1aa2 d.159.1.2 (A:28-329) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Thermus thermophilus [TaxId: 274]
Probab=97.80 E-value=0.00026 Score=69.83 Aligned_cols=173 Identities=17% Similarity=0.109 Sum_probs=93.1
Q ss_pred CeEEEEEcccCCCCC------------------hHHHHHHHHHCCCC-EEEEcccccccccccccCCCCCcccccCCCCC
Q 008029 199 PHRIAVIGDLGLTSN------------------SSTTVDHLIQNDPS-LILMVGDLTYANQYLTTGGKAASCYSCAFPDA 259 (580)
Q Consensus 199 ~~rfav~gD~g~~~~------------------~~~~l~~i~~~~pD-fvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~ 259 (580)
.++|+..+|+|.... ....++++.+.+++ ++|-+||++.....
T Consensus 2 tl~IlhtnD~Hg~l~~~~~~~~~~~~~~gG~ar~~t~i~~~r~~~~~~l~ldaGD~~~Gs~~------------------ 63 (302)
T d2z1aa2 2 TLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLY------------------ 63 (302)
T ss_dssp EEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHH------------------
T ss_pred EEEEEEEcccccCcccccccccCCccccCcHHHHHHHHHHHHHhCCCeEEEEcCCCCCCCHh------------------
Confidence 478999999986421 12345555555554 77889999854211
Q ss_pred ccccccHHHHHHHHHhhhhhccCCCeEEecCCCCCCCCcccccHHHHHhhcCCCCCCC----------CCCCcceEEEEe
Q 008029 260 PIRETYQPRWDGWGRFMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLTRFAVPSEES----------GSNSNFYYSFNA 329 (580)
Q Consensus 260 p~~e~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~----------~~~~~~yYsfd~ 329 (580)
... .+.....+.|+.+ -.=..++||||+... ...+..+.....+|.-.. ...-..|.-.+.
T Consensus 64 --~~~--~~g~~~~~~~n~~---gyDa~~~GNHEfd~G--~~~l~~~~~~~~~p~l~aNi~~~~~~~~~~~~~~y~i~~~ 134 (302)
T d2z1aa2 64 --FNQ--YRGLADRYFMHRL---RYRAMALGNHEFDLG--PGPLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVV 134 (302)
T ss_dssp --HHH--HTTHHHHHHHHHT---TCCEEECCGGGGTTC--HHHHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEEE
T ss_pred --Hhh--hcchhHHHHHHhc---ccccccccchhhhcC--hhHHHHHhhhcccceeEeeeeccccccccCccceeEEEEE
Confidence 000 0112223334433 233678999999633 233444444333332110 112345777888
Q ss_pred CcEEEEEEc--Ccc-----------cCCCcHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHH
Q 008029 330 GGVHFIMLG--AYV-----------DYNSTGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEA 396 (580)
Q Consensus 330 G~v~fI~Ld--t~~-----------~~~~~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ 396 (580)
+++++-++. +.. .+....+..++..+.|++ .+..-+|++.|.... .-..
T Consensus 135 ~g~kIgiiG~~t~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~---~~~DiiV~l~H~g~~---------------~d~~ 196 (302)
T d2z1aa2 135 GGERVGIIGLTTPDTREISNPGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGYG---------------EDLK 196 (302)
T ss_dssp TTEEEEEEEEECTTHHHHSCCCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHH---------------HHHH
T ss_pred CCeEEEEEecccccccccccccCcccccCHHHHHHHHHHHhhc---cCCCEEEEeeccCcc---------------hhhH
Confidence 886654443 210 011233444455555544 445679999998521 1122
Q ss_pred HHHhc-CCcEEEEccccCcee
Q 008029 397 LLYQY-GVDIVFSGHVHAYER 416 (580)
Q Consensus 397 Ll~ky-~VdlvlsGH~H~yeR 416 (580)
+.++. +||++++||.|..-.
T Consensus 197 la~~~~giD~ii~gh~h~~~~ 217 (302)
T d2z1aa2 197 LARRLVGVQVIVGGHSHTLLG 217 (302)
T ss_dssp HHTTCSSCCEEEECSSCCCBS
T ss_pred HHhcCCCeeeeecCccceeec
Confidence 33343 799999999997543
|
| >d1x5xa1 b.1.2.1 (A:8-103) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.35 E-value=0.00039 Score=55.31 Aligned_cols=90 Identities=18% Similarity=0.174 Sum_probs=53.2
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|..+.+.-.+.+++.|+|.-.....|..+ ..-.++|............ +.. ...
T Consensus 3 ~P~~~~v~~~~~~si~l~W~~p~~~~~~~~-------~~y~~~~~~~~~~~~~~~~-----~~~-------------~~~ 57 (96)
T d1x5xa1 3 MPASPVLTKAGITWLSLQWSKPSGTPSDEG-------ISYILEMEEETSGYGFKPK-----YDG-------------EDL 57 (96)
T ss_dssp CCCCCEEEEECSSEEEEECCCCSSCCSSSS-------CEEEEEECCSSSSCCCEEE-----EEE-------------SCS
T ss_pred cCCCCEEEEecCCEEEEEEEeecccCcceE-------eeeEEEeeeccceeeeEEe-----ecC-------------CCC
Confidence 466666655568899999985432212110 1224455444333222211 110 112
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCC---CccceEEEEcCC
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIP---AMSAEHVFETLP 191 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~p 191 (580)
..+|+||+|+|.|.+||...+.. .+|+...|+|+|
T Consensus 58 ~~~v~~L~p~t~Y~~rV~A~n~~G~s~~S~~~~~~T~p 95 (96)
T d1x5xa1 58 AYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCP 95 (96)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSCEEEECCCEEEECCC
T ss_pred EEEECCCCCCCEEEEEEEEEcCCcEeCCCCCEEEEeCc
Confidence 45689999999999999775543 467889999987
|
| >d1x5aa1 b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-A receptor 1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.18 E-value=0.00052 Score=55.24 Aligned_cols=88 Identities=16% Similarity=0.264 Sum_probs=53.0
Q ss_pred CCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccE
Q 008029 76 NFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGII 155 (580)
Q Consensus 76 ~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 155 (580)
..|..+++.-.++++|.|+|.-.....+.. ...=.|+|....+..... . .-
T Consensus 4 ~~p~~L~~~~~~~~si~vsW~~p~~~~~~~-------~i~Y~i~~~~~~~~~~~~----------~------------~~ 54 (94)
T d1x5aa1 4 LSGLSLKLVKKEPRQLELTWAGSRPRNPGG-------NLSYELHVLNQDEEWHQM----------V------------LE 54 (94)
T ss_dssp CCSCCCCEEEEETTEEEEECCCCCSSCCSS-------CCEEEEEEECSSCEEEEE----------E------------SS
T ss_pred CCCCceEEEEcCCCEEEEEEecccCCCCCc-------EEEEEEEEecCCceEEEe----------e------------cc
Confidence 356677776666999999997532211100 012334444433211100 0 01
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCC---CCccceEEEEcCCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKI---PAMSAEHVFETLPL 192 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~ 192 (580)
.+++|+||+|+|.|.+||...+. +.+|+...|+|.|.
T Consensus 55 t~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~T~PP 94 (94)
T d1x5aa1 55 PRVLLTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRTSPP 94 (94)
T ss_dssp SEEEEESCCSSCEEEEEEEEECSSSCCCCCCCEEEECCCC
T ss_pred CEEEECCCCCCCEEEEEEEEEcCCcCcCCCCCEEEEeCCC
Confidence 34678999999999999966442 36789999999873
|
| >d1x4xa1 b.1.2.1 (A:8-100) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.13 E-value=0.00054 Score=54.49 Aligned_cols=86 Identities=21% Similarity=0.268 Sum_probs=51.3
Q ss_pred CceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEEE
Q 008029 78 PEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIHH 157 (580)
Q Consensus 78 P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h~ 157 (580)
|..+.|....++++.|+|.-.... +.. ...=.|+|....+.......+. ...
T Consensus 4 P~~~~v~~~s~~si~l~W~~p~~~-~~~-------i~~Y~v~~~~~~~~~~~~~~~~--------------------~~~ 55 (93)
T d1x4xa1 4 CKPPQVTCRSATCAQVNWEVPLSN-GTD-------VTEYRLEWGGVEGSMQICYCGP--------------------GLS 55 (93)
T ss_dssp CCCCCCEEEETTEEEEECCCCSCS-SSC-------CCEEEEEEESSTTSCCEEEEES--------------------CSE
T ss_pred CCCCEEEEeCCCeEEEEEEecccC-CCe-------eEEEEEEEccCCCcceEeecCC--------------------ccE
Confidence 333334333478999999743221 111 0234567766555433222111 133
Q ss_pred EEeCCCCCCCEEEEEEEeCCC---CCccceEEEEcCC
Q 008029 158 VKIDGLDPGTKYYYKCGDSKI---PAMSAEHVFETLP 191 (580)
Q Consensus 158 v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p 191 (580)
.+|++|+|+|.|.+||...+. ..+|+...|+|+|
T Consensus 56 ~~i~~L~p~t~Y~~~V~A~n~~G~s~~S~~~~~~Tpp 92 (93)
T d1x4xa1 56 YEIKGLSPATTYYCRVQALSVVGAGPFSEVVACVTPP 92 (93)
T ss_dssp EEEESCCSSCEEEEEEEEECSSCCCCBCCCEEEECCC
T ss_pred EEEcccceeeEEEEEEEEEECCcCcCCCCcEEEEeCC
Confidence 568999999999999966443 3678889999976
|
| >d1tdqa2 b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.07 E-value=0.0021 Score=50.36 Aligned_cols=80 Identities=19% Similarity=0.245 Sum_probs=50.4
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|.++.+.-...+++.|+|.-.... ...-.|+|....+........ .. ..+-.+
T Consensus 3 aP~~l~v~~~~~~sv~v~W~~p~~~-----------~~~y~v~y~~~~~~~~~~~~~-----~~----------~~~~~~ 56 (92)
T d1tdqa2 3 APKNLRVGSRTATSLDLEWDNSEAE-----------AQEYKVVYSTLAGEQYHEVLV-----PK----------GIGPTT 56 (92)
T ss_dssp CCEEEEEEEECSSCEEEEEECCSSC-----------CSEEEEEEEETTCCCCEEEEE-----EC----------CSSSEE
T ss_pred cCcCCEEEEecCCEEEEEEEecCCc-----------ccceEEEEEEcCCCcceeeEE-----Ee----------cCCCee
Confidence 5888888766799999999754321 124567887655432221110 00 123446
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCCCcc
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIPAMS 182 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~~~S 182 (580)
.+.|+||+|+|.|.++|..-...+.|
T Consensus 57 ~~~i~~L~p~t~Y~~~V~a~~~~g~s 82 (92)
T d1tdqa2 57 KTTLTDLVPGTEYGVGISAVMNSKQS 82 (92)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEEC
T ss_pred EEEECCccCCCEEEEEEEEEeCCCEe
Confidence 78999999999999999765433333
|
| >d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.98 E-value=0.0027 Score=51.47 Aligned_cols=94 Identities=18% Similarity=0.268 Sum_probs=54.7
Q ss_pred CCCCceEEEEeCC--CCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCcccccc
Q 008029 75 SNFPEQIALAISS--PTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTS 152 (580)
Q Consensus 75 ~~~P~qi~la~~~--~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~ 152 (580)
...|..+.+.... .+++.|+|.-....-| + ...-.|+|....+...... ....+ .
T Consensus 12 ~~pP~~~~v~~~~~~~~sv~v~W~~P~~~~g-------~-i~~Y~i~~~~~~~~~~~~~--~~~~~-------------~ 68 (111)
T d1x5ka1 12 TSPPKDVTVVSKEGKPKTIIVNWQPPSEANG-------K-ITGYIIYYSTDVNAEIHDW--VIEPV-------------V 68 (111)
T ss_dssp CSCCEEEEEEECSSCTTCEEEEEECCSCCSS-------C-CCEEEEEEESCSSSCTTTS--EEEEE-------------S
T ss_pred CCCCCCcEEEEecCCCCEEEEEEEccccCCC-------c-eeeeEEeeeecCCCCccee--EEEEe-------------C
Confidence 3458888776544 8899999985332111 0 0123456654433211100 00000 1
Q ss_pred ccEEEEEeCCCCCCCEEEEEEEeCCC---CCccceEEEEcCC
Q 008029 153 GIIHHVKIDGLDPGTKYYYKCGDSKI---PAMSAEHVFETLP 191 (580)
Q Consensus 153 ~~~h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p 191 (580)
+-.+..+|+||+|+|.|.+||...+. +.+|+...|+|..
T Consensus 69 ~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~~ 110 (111)
T d1x5ka1 69 GNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPK 110 (111)
T ss_dssp TTCSEEEECSCCSSSEEEEEEEEECSSCBCCCCCCEEEECCC
T ss_pred CCeeEEEECCCCCCCEEEEEEEEEcCCCCcCCCCCEEEECCC
Confidence 12245678999999999999976543 2578889999864
|
| >d1qg3a1 b.1.2.1 (A:1126-1217) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Integrin beta-4 subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.87 E-value=0.0028 Score=49.82 Aligned_cols=85 Identities=15% Similarity=0.142 Sum_probs=54.6
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|..+.+.-.+++++.|+|.-.. |. ...-.|+|............. .+...
T Consensus 4 aP~n~~~~~~s~~si~l~W~~p~---~~--------~~~Y~i~y~~~~~~~~~~~~~------------------~~~~~ 54 (92)
T d1qg3a1 4 APQNPNAKAAGSRKIHFNWLPPS---GK--------PMGYRVKYWIQGDSESEAHLL------------------DSKVP 54 (92)
T ss_dssp CCEEEEEEECSTTCEEEEEECCS---SC--------CCEEEEEEEETTSCGGGCEEE------------------EESSS
T ss_pred cCCCCEEEEccCCEEEEEEEecC---CC--------ccceEEeeeeccccccEEEEe------------------cCCcc
Confidence 58888887767999999997432 11 123456776654432221110 01224
Q ss_pred EEEeCCCCCCCEEEEEEEeCCC---CCccceEEEEcC
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKI---PAMSAEHVFETL 190 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~ 190 (580)
...|++|+|+|.|.+||...+. +.+|+...|+|.
T Consensus 55 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~ 91 (92)
T d1qg3a1 55 SVELTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTH 91 (92)
T ss_dssp EEEECSCCTTCEEEEEEEEECSSCBCCCCCCEEEECC
T ss_pred EEEECCCCCCcEEEEEEEEEeCCcCcCCCCCEEEEcC
Confidence 5778999999999999976443 257778888874
|
| >d2b5ib2 b.1.2.1 (B:104-207) Interleukin-2 receptor beta chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-2 receptor beta chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.84 E-value=0.0025 Score=51.12 Aligned_cols=94 Identities=13% Similarity=0.138 Sum_probs=56.1
Q ss_pred CCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccE
Q 008029 76 NFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGII 155 (580)
Q Consensus 76 ~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 155 (580)
..|..+++.--..+++.|+|.......+. .....-.|+|....+..... . ... .+..-
T Consensus 4 ~pP~~l~v~~~~~~s~~l~W~~p~~~~~~------~~~~~~~v~~~~~~~~~~~~-~--~~~-------------~~~~~ 61 (104)
T d2b5ib2 4 MAPISLQVVHVETHRCNISWEISQASHYF------ERHLEFEARTLSPGHTWEEA-P--LLT-------------LKQKQ 61 (104)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSCCGGG------TTCEEEEEEEECTTSCSTTS-C--CEE-------------ECSCC
T ss_pred CCCCCcEEEEEeCCEEEEEEccccccccc------cceeEEEEEEecccccceee-e--EEe-------------cCCCc
Confidence 46899998887889999999865321110 00012345665544321110 0 000 01123
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCC-------CCccceEEEEcCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKI-------PAMSAEHVFETLP 191 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~-------~~~S~~~~F~T~p 191 (580)
..+.|+||+|+|.|.+||..... ..||+...|+|.|
T Consensus 62 ~~~~i~~L~p~t~Y~~rVra~~~~g~~g~wS~wS~~v~~~T~P 104 (104)
T d2b5ib2 62 EWICLETLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKP 104 (104)
T ss_dssp CEEEECSCCTTCEEEEEEEEEESCCSSCCCCCCCCCEEEECCC
T ss_pred EEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCcCCEEEECCC
Confidence 45688999999999999975321 2567789999976
|
| >d2djsa1 b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-B receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.83 E-value=0.001 Score=52.79 Aligned_cols=36 Identities=31% Similarity=0.582 Sum_probs=29.1
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCCC---CccceEEEEcCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKIP---AMSAEHVFETLP 191 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~p 191 (580)
..++|++|+|+|.|.+||...+.. .+|+...|+|+|
T Consensus 56 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 94 (95)
T d2djsa1 56 NTARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLT 94 (95)
T ss_dssp SEEEEESCCTTCEEEEEEEEEESSCEEEECCCEEEECCC
T ss_pred cEEEEeecCCccEEEEEEEEEcCCCCCCCCCCEEEEeCC
Confidence 456789999999999999765432 468888999987
|
| >d1x5la1 b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-A receptor 8 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.83 E-value=0.0017 Score=52.26 Aligned_cols=88 Identities=18% Similarity=0.266 Sum_probs=54.8
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|..+++.-.+.+++.|+|.......|. + ..=.|+|....+....... + .+..+
T Consensus 6 ~p~~~~~~~~s~~si~v~W~~P~~~~g~----i----~~Y~v~y~~~~~~~~~~~~-----~-------------~~~~~ 59 (98)
T d1x5la1 6 QVVVIRQERAGQTSVSLLWQEPEQPNGI----I----LEYEIKYYEKDKEMQSYST-----L-------------KAVTT 59 (98)
T ss_dssp CCCCEECSCBCSSCEEEEECCCSCCCSC----C----CEEEEEEEESSSCCSSCEE-----E-------------EESSS
T ss_pred CCCceEEEeccCCEEEEEEECCCCCCCC----E----EEEEEEeecccccceeeEE-----e-------------cCCce
Confidence 5777776666699999999854322110 0 1234777665433222110 0 01224
Q ss_pred EEEeCCCCCCCEEEEEEEeCCC---CCccceEEEEcC
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKI---PAMSAEHVFETL 190 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~ 190 (580)
..+|+||+|+|+|.+||...+. ..||+...|+|.
T Consensus 60 ~~~i~~L~p~t~Y~~~V~a~n~~G~g~~S~~v~~~T~ 96 (98)
T d1x5la1 60 RATVSGLKPGTRYVFQVRARTSAGCGRFSQAMEVETG 96 (98)
T ss_dssp EEEECSCCTTCEEEECEEEEETTEECCCCCCEEEECC
T ss_pred EEEECCCCCCCEEEEEEEEEcCCCCcCCCCCEEEEcC
Confidence 6678999999999999965443 257889999985
|
| >d1x5fa1 b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.76 E-value=0.0074 Score=49.05 Aligned_cols=91 Identities=19% Similarity=0.253 Sum_probs=55.3
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|+.+.+.....++|.|+|.-.....+.. ...=.|.|........... .. ....-.
T Consensus 13 ~P~~l~~~~~~~~sv~lsW~~P~~~~~~~-------i~~Y~v~~~~~~~~~~~~~--------~~---------~~~~~~ 68 (107)
T d1x5fa1 13 APRDVVASLVSTRFIKLTWRTPASDPHGD-------NLTYSVFYTKEGIARERVE--------NT---------SHPGEM 68 (107)
T ss_dssp CCEEEEEEEECSSCEEEEEECCSSCSSCC-------SSEEEEEEEETTCCCCEEE--------EC---------SSTTCS
T ss_pred CCCccEEEEecCCEEEEEEECCccCCCCc-------eEEEEEEEEeCCCCceEEE--------EE---------eCCCcc
Confidence 68888877666999999997532111100 0123466655433222111 00 011235
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCCC---ccceEEEEcCC
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIPA---MSAEHVFETLP 191 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~~---~S~~~~F~T~p 191 (580)
.+.|++|+|+|+|.+||...+..+ +|....++|.|
T Consensus 69 ~~~~~~L~p~t~Y~~rV~A~n~~G~g~~S~~i~v~T~~ 106 (107)
T d1x5fa1 69 QVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQP 106 (107)
T ss_dssp EEEECSCCTTCEEEEEEEEECSSCEEEECCCEEEECCC
T ss_pred EEEecCCCCCCEEEEEEEEEeCCCCcCCCCCEEEECCC
Confidence 678999999999999997765443 46778888865
|
| >d1owwa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.73 E-value=0.0027 Score=50.91 Aligned_cols=87 Identities=17% Similarity=0.221 Sum_probs=54.0
Q ss_pred CCceEEEEeCC--CCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCcccccccc
Q 008029 77 FPEQIALAISS--PTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGI 154 (580)
Q Consensus 77 ~P~qi~la~~~--~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 154 (580)
.|.++.|+... ++++.|+|.-... ..+ ..=.|+|....+...... .. .++-
T Consensus 2 aP~~~~vt~~~~~~~s~~vsW~~P~~---~~i-------~~Y~i~y~~~~~~~~~~~----~~-------------v~~~ 54 (93)
T d1owwa_ 2 GPVEVFITETPSQPNSHPIQWNAPQP---SHI-------SKYILRWRPKNSVGRWKE----AT-------------IPGH 54 (93)
T ss_dssp CCCEEECCCCSSCTTCEEEEEECCSS---SCE-------EEEEEEEEETTCSSCCEE----EE-------------ECSS
T ss_pred cCcccEEEEccCCCCEEEEEeecccc---cce-------eEEEEEEeeccccceeee----ec-------------cCCC
Confidence 48888887766 7899999986421 110 123567776543322110 00 0123
Q ss_pred EEEEEeCCCCCCCEEEEEEEeCCCCCccc--eEEEEcC
Q 008029 155 IHHVKIDGLDPGTKYYYKCGDSKIPAMSA--EHVFETL 190 (580)
Q Consensus 155 ~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~ 190 (580)
...++|+||+|||.|..+|..-+..+.|+ ...|+|.
T Consensus 55 ~~~~~l~gL~P~t~Y~v~v~av~~~G~s~~~~~~~tT~ 92 (93)
T d1owwa_ 55 LNSYTIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTTT 92 (93)
T ss_dssp CCEEEECSCCSSEEEEEEEEEEESSSCEEEEEEEEEEC
T ss_pred ccEEEECCcccCcEEEEEEEEEeCCCccCcEEEEEEec
Confidence 45678999999999999997654344443 5777774
|
| >d1x4za1 b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Brother of CDO precursor (BOC) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.72 E-value=0.0039 Score=51.04 Aligned_cols=84 Identities=20% Similarity=0.278 Sum_probs=46.7
Q ss_pred CCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccE
Q 008029 76 NFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGII 155 (580)
Q Consensus 76 ~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 155 (580)
..|..+.+.-...+++.|+|.- ...-|..+ ..=.|+|.............. .. +...
T Consensus 12 ~~P~~~~v~~~~~~sv~l~W~p-~~~~g~~I-------~~Y~v~~~~~~~~~~~~~~~~------~~---------~~~~ 68 (108)
T d1x4za1 12 EAPDRPTISTASETSVYVTWIP-RGNGGFPI-------QSFRVEYKKLKKVGDWILATS------AI---------PPSR 68 (108)
T ss_dssp CCCCCCEEEECCSSEEEEECCC-CCCTTSCC-------CEEEEEEEESSSCCCCEEEEE------EE---------CTTC
T ss_pred ccCCCCEEEEccCCEEEEEEEC-CCCCCCcc-------EEEEEEEEecCCCCceEEEEE------ee---------cCCc
Confidence 4577777765558899999942 22111111 223466765443322111110 00 1122
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCCCCcc
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKIPAMS 182 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S 182 (580)
...+|+||+|+|.|.|||...+..++|
T Consensus 69 ~~~~v~~L~p~t~Y~frV~A~N~~G~s 95 (108)
T d1x4za1 69 LSVEITGLEKGISYKFRVRALNMLGES 95 (108)
T ss_dssp CEEEEESCCTTCEEEEEEEEEETTEEC
T ss_pred cEEEECCCCCCCEEEEEEEEECCCcCC
Confidence 456789999999999999775533433
|
| >d1x5ja1 b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.67 E-value=0.0017 Score=51.92 Aligned_cols=93 Identities=16% Similarity=0.156 Sum_probs=53.1
Q ss_pred CCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccE
Q 008029 76 NFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGII 155 (580)
Q Consensus 76 ~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 155 (580)
..|..+.+.-..++++.|+|.......+.... ....-.|+|............ . + ..-
T Consensus 3 ~pP~~v~~~~~s~tsi~v~W~~p~~~~~~~~~----~~~~y~v~~~~~~~~~~~~~~-----~----~---------~~~ 60 (100)
T d1x5ja1 3 MPPVGVQASILSHDTIRITWADNSLPKHQKIT----DSRYYTVRWKTNIPANTKYKN-----A----N---------ATT 60 (100)
T ss_dssp CCCEEEEEEEEETTEEEEEEECTTSCSSSCCC----SSCEEEEEECBSSSSSCCCEE-----C----C---------BCS
T ss_pred CCCcCeEEEEecCCEEEEEEcCCcccccccee----eEEEEEEEeeecCCCcceeEe-----c----C---------CCc
Confidence 35888887766699999999863221111100 001234566554433221110 0 0 011
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCCC---CccceEEEEcC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKIP---AMSAEHVFETL 190 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~ 190 (580)
..++|+||+|+|.|.+||...+.. .+|+...++|.
T Consensus 61 ~~~~i~~L~p~t~Y~~~V~a~n~~g~s~~S~~~~~~T~ 98 (100)
T d1x5ja1 61 LSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTF 98 (100)
T ss_dssp SEEEEESCCTTCEECCEEEEECSSCBCCCCCCCCEECC
T ss_pred cEEEECCCCCCCEEEEEEEEEeCCcCcCCCCeEEEEec
Confidence 246789999999999999764432 56667777764
|
| >d1qr4a2 b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=96.63 E-value=0.0052 Score=48.04 Aligned_cols=77 Identities=22% Similarity=0.187 Sum_probs=49.1
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|.++.+.--..+++.|+|...... ...=.|+|............ + .....
T Consensus 3 ~P~~l~v~~v~~~s~~l~W~~~~~~-----------~~~Y~i~~~~~~~~~~~~~~-----~-------------~~~~~ 53 (88)
T d1qr4a2 3 SPKGISFSDITENSATVSWTPPRSR-----------VDSYRVSYVPITGGTPNVVT-----V-------------DGSKT 53 (88)
T ss_dssp CCSCEEEESCCSSCEEEEECCCSSC-----------CSEEEEEEEETTCCCCEEEE-----E-------------ETTCC
T ss_pred CCcceEEEEecCCEEEEEEEcccEe-----------eceEEEEEEeccCCceEEEE-----e-------------cCCcc
Confidence 5888888777799999999753211 12345677765543322211 1 01224
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCCCcc
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIPAMS 182 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~~~S 182 (580)
.+.|+||+|+|+|.++|..-+..+.|
T Consensus 54 ~~~i~~L~p~t~Y~~~V~a~~~~g~s 79 (88)
T d1qr4a2 54 RTKLVKLVPGVDYNVNIISVKGFEES 79 (88)
T ss_dssp EEEECSCCSSCEEEEEEEEEETTEEC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCCCc
Confidence 67899999999999999765533444
|
| >d1qr4a1 b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=96.55 E-value=0.005 Score=47.92 Aligned_cols=83 Identities=20% Similarity=0.166 Sum_probs=50.9
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|..+++.--+.+++.|+|.-.... ...=.|+|......... .. . +.-..
T Consensus 2 aP~~l~v~~~t~~sv~v~W~~p~~~-----------~~~Y~v~~~~~~~~~~~------~~---~----------~~~~~ 51 (87)
T d1qr4a1 2 NPKDLEVSDPTETTLSLRWRRPVAK-----------FDRYRLTYVSPSGKKNE------ME---I----------PVDST 51 (87)
T ss_dssp CCEEEEEESCCSSEEEEEEECCSSC-----------CSEEEEEEECTTCCEEE------EE---E----------CTTCS
T ss_pred cCcCcEEEEecCCEEEEEEECCCCC-----------cceeEEEeecCCcceeE------Ee---C----------CCCcC
Confidence 5888888766799999999854321 12335777765432110 00 0 11224
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCCCccc--eEEEEc
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIPAMSA--EHVFET 189 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T 189 (580)
...|+||+|+|+|.++|..-...+.|+ ...++|
T Consensus 52 ~~~~~~L~p~t~Y~v~V~a~~~~~~s~~~~~~~~T 86 (87)
T d1qr4a1 52 SFILRGLDAGTEYTISLVAEKGRHKSKPTTIKGST 86 (87)
T ss_dssp EEEEESCCSSCEEEEEEEEESSSCBCCCEEEEEEC
T ss_pred EEEECCCCcCCEEEEEEEEEcCCCCccCEEEEEEc
Confidence 578999999999999997655334443 344444
|
| >d1x4ya1 b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Brother of CDO precursor (BOC) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.51 E-value=0.012 Score=46.88 Aligned_cols=93 Identities=17% Similarity=0.145 Sum_probs=56.2
Q ss_pred CCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCC-CcEEEEcccCCCcceEEeeEEEEEeeecccCCcccccccc
Q 008029 76 NFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTV-ASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGI 154 (580)
Q Consensus 76 ~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~-~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 154 (580)
..|..+++..-..++|.|+|......... ... .=.|.|....+.......-.. .++.
T Consensus 3 ~~P~~~~~~~~s~tsi~v~W~~~~~~~~~-------~~i~~Y~v~y~~~~~~~~~~~~~~~---------------~~~~ 60 (101)
T d1x4ya1 3 AGPYITFTDAVNETTIMLKWMYIPASNNN-------TPIHGFYIYYRPTDSDNDSDYKKDM---------------VEGD 60 (101)
T ss_dssp SCCEEEEEECSSSSCEEEEEECCCTTSCC-------CCCCEEEEEECCTTSCSGGGCCCEE---------------EETT
T ss_pred CCCcccEEEEEcCCEEEEEEecCcccccc-------cceEEEEEEeeeccceeeeeeeEEE---------------EcCC
Confidence 46888888877799999999864322110 011 123666654432211110000 0112
Q ss_pred EEEEEeCCCCCCCEEEEEEEeCCC---CCccceEEEEcC
Q 008029 155 IHHVKIDGLDPGTKYYYKCGDSKI---PAMSAEHVFETL 190 (580)
Q Consensus 155 ~h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~ 190 (580)
....+|.+|+|++.|++||...+. ..+|+...++|.
T Consensus 61 ~~~~~i~~L~p~t~Y~~~v~a~n~~G~s~~S~~~~~~T~ 99 (101)
T d1x4ya1 61 RYWHSISHLQPETSYDIKMQCFNEGGESEFSNVMICETK 99 (101)
T ss_dssp CCEEEECSCCTTCEEEEEEEEECTTCCCCCCCCEEEECC
T ss_pred eeEEEEcCCCCCCEEEEEEEEEcCCCCCCCCCcEEEEcc
Confidence 244568999999999999977543 367888999885
|
| >d2vkwa2 b.1.2.1 (A:601-693) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neural cell adhesion molecule 1, NCAM species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.49 E-value=0.0077 Score=47.47 Aligned_cols=88 Identities=20% Similarity=0.151 Sum_probs=53.0
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|..+.+.-...+++.|+|.-... -|..+ ..=.|+|....+....... ..+...
T Consensus 3 ~P~~~~~~~~~~~sv~l~W~~p~~-~~~~I-------~~Y~i~~~~~~~~~~~~~~------------------~~~~~~ 56 (93)
T d2vkwa2 3 APKLEGQMGEDGNSIKVNLIKQDD-GGSPI-------RHYLVRYRALSSEWKPEIR------------------LPSGSD 56 (93)
T ss_dssp CCEEEEEECTTSSCEEEEEECCCC-TTSCC-------CEEEEEEEETTSCCCCCEE------------------ECTTCC
T ss_pred CCccCEeEEcCCCEEEEEeeCCCC-CcCce-------EEEEEEeeecCcceeeeee------------------ccCCce
Confidence 476666655558999999986532 11111 2334677765543221110 011224
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCCCccc--eEEEEcC
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIPAMSA--EHVFETL 190 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~ 190 (580)
+++|+||+|+|.|.+||..-+..+.|+ ...|+|.
T Consensus 57 ~~~i~~L~p~t~Y~~~V~A~N~~G~s~ps~~~~~T~ 92 (93)
T d2vkwa2 57 HVMLKSLDWNAEYEVYVVAENQQGKSKAAHFVFRTA 92 (93)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECC
T ss_pred EEEEeccccceEEEEEEEEEcCCCCcCCEeEEEEec
Confidence 577899999999999997765444443 5678774
|
| >d1tena_ b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.48 E-value=0.0089 Score=46.66 Aligned_cols=78 Identities=18% Similarity=0.175 Sum_probs=48.2
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|.+++++--..+++.|+|.-.... ...-.|+|....+...... ... ++-..
T Consensus 4 ~P~~l~v~~~s~~s~~l~W~~p~~~-----------~~~y~v~~~~~~~~~~~~~----~~~-------------~~~~~ 55 (90)
T d1tena_ 4 APSQIEVKDVTDTTALITWFKPLAE-----------IDGIELTYGIKDVPGDRTT----IDL-------------TEDEN 55 (90)
T ss_dssp CCEEEEEESCCSSCEEEEEECCSSC-----------CSEEEEEEEETTCTTCCEE----EEE-------------ETTCC
T ss_pred CCCCcEEEEecCCEEEEEEEeCceE-----------eccEEEEEEEcCCCceeEE----EEe-------------cCCcc
Confidence 5888888766699999999743211 1234677765543222111 000 11234
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCCCcc
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIPAMS 182 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~~~S 182 (580)
.+.|.||+|+|.|.++|...+..+.|
T Consensus 56 ~~~i~~L~p~t~Y~~~V~a~~~~g~s 81 (90)
T d1tena_ 56 QYSIGNLKPDTEYEVSLISRRGDMSS 81 (90)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEEC
T ss_pred eeeEeeecCCCEEEEEEEEEeCCCEe
Confidence 67899999999999999765533443
|
| >d2ibga1 b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Hedgehog receptor iHog species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.46 E-value=0.0058 Score=48.34 Aligned_cols=84 Identities=18% Similarity=0.204 Sum_probs=47.4
Q ss_pred CCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccE
Q 008029 76 NFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGII 155 (580)
Q Consensus 76 ~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 155 (580)
..|..+.+.--.++++.|+|.......+..+ ..=.|+|............ ... .+..
T Consensus 8 ~~P~~~~v~~~s~tsv~l~W~~P~~~~~~~i-------~gY~i~y~~~~~~~~~~~~---~~~-------------~~~~ 64 (95)
T d2ibga1 8 PVPELLEIEEYSETAVVLHWSLASDADEHLI-------TGYYAYYRPSSSAGEYFKA---TIE-------------GAHA 64 (95)
T ss_dssp CCCEECCCBCCSSSCEEEEEECCTTCCGGGC-------CEEEEEEEETTCCSCCEEE---EEE-------------CTTC
T ss_pred CCCcCeEEEEeCCCEEEEEEEeeeeccCCcc-------cccceeEeeeeecceeeee---ecc-------------CCce
Confidence 3476666655558999999974322111000 1235777765433221110 000 1123
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCCCCcc
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKIPAMS 182 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S 182 (580)
+...|+||+|+|.|.+||..-+..+.|
T Consensus 65 ~~~~i~~L~p~t~Y~~~V~A~n~~G~s 91 (95)
T d2ibga1 65 RSFKIAPLETATMYEFKLQSFSAASAS 91 (95)
T ss_dssp CEEEECSCCTTCEEEEEEEEECSSCBC
T ss_pred eEEEEeeccCCeEEEEEEEEEeCCccC
Confidence 567899999999999999876544444
|
| >d2cuha1 b.1.2.1 (A:8-109) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.46 E-value=0.0052 Score=49.31 Aligned_cols=87 Identities=14% Similarity=0.053 Sum_probs=52.4
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|.++++.--.++++.|+|.-.... ...=.|+|....+..... .. .+-..
T Consensus 3 ~P~~l~~~~~t~~si~l~W~~p~~~-----------i~~Y~v~~~~~~~~~~~~------~~-------------~~~~~ 52 (102)
T d2cuha1 3 GPTQLRALNLTEGFAVLHWKPPQNP-----------VDTYDIQVTAPGAPPLQA------ET-------------PGSAV 52 (102)
T ss_dssp SCEEEECCCCSSSCEEEEEECCSSC-----------CSEEEEEEECSSSCCEEE------EE-------------ETTCS
T ss_pred CCCccEEEEeCCCEEEEEEEeeecc-----------ceeeEEEEEeccccceee------ee-------------eeeee
Confidence 4777777544599999999753211 023356675543321110 00 11224
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCCCcc--ceEEEEcCCCC
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIPAMS--AEHVFETLPLP 193 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~~~S--~~~~F~T~p~~ 193 (580)
.+.|+||+|+|.|.++|......+.| ....|+|.+.+
T Consensus 53 ~~~l~~L~p~t~Y~~~V~a~~~~~~s~~~~~~~~T~~~~ 91 (102)
T d2cuha1 53 DYPLHDLVLHTNYTATVRGLRGPNLTSPASITFTTGLEA 91 (102)
T ss_dssp EEEECSCCSSSEEEEEEEEEETTEECCCEEEEEESCCCC
T ss_pred eEEEccEEeeEEEEEEEEEEeCCCCcCCEEEEEECCCCC
Confidence 57799999999999999765433333 35688887654
|
| >d2cuia1 b.1.2.1 (A:6-106) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.45 E-value=0.0038 Score=49.92 Aligned_cols=94 Identities=15% Similarity=0.144 Sum_probs=51.4
Q ss_pred CCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccE
Q 008029 76 NFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGII 155 (580)
Q Consensus 76 ~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 155 (580)
..|++++++--..+++.|+|.... | + ...-.|+|..................... .++.-
T Consensus 5 p~~~~l~v~~~t~~sv~v~W~pp~---~-------~-~~~y~i~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~ 64 (101)
T d2cuia1 5 PRLSQLSVTDVTTSSLRLNWEAPP---G-------A-FDSFLLRFGVPSPSTLEPHPRPLLQRELM---------VPGTR 64 (101)
T ss_dssp CCCCCCEEESCCSSCEEEECCCCT---T-------S-CSEEEEEEECCCCSSSCCCSSCCCCEEEE---------EETTC
T ss_pred cCCCCcEEEEECCCEEEEEEEecc---c-------c-ccceEEEEEecCCCceeeccCCcceeEee---------cccce
Confidence 357777777666999999995422 1 1 12356677665432211110000000000 01223
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCCCCccc--eEEEEc
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKIPAMSA--EHVFET 189 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T 189 (580)
...+|+||+|+|.|.++|...+..+.++ ...++|
T Consensus 65 ~~~~v~~L~p~t~Y~~~V~a~~~~g~g~~~~~~~~T 100 (101)
T d2cuia1 65 HSAVLRDLRSGTLYSLTLYGLRGPHKADSIQGTART 100 (101)
T ss_dssp CEEEECSCCTTCEEEEEEEEECSSSEEEEEEEEEEC
T ss_pred eEEEeCCCCcCCEEEEEEEEEeCCcEeCCeEEEeEE
Confidence 5567899999999999997765444433 345554
|
| >d1fnha1 b.1.2.1 (A:3-92) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.44 E-value=0.0083 Score=46.73 Aligned_cols=85 Identities=22% Similarity=0.195 Sum_probs=49.8
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|..+.++--..+++.|+|.-.... ...-.++|........... .. . + .-.-
T Consensus 2 pP~~l~~~~v~~~si~l~W~~p~~~-----------~~~~~i~~~~~~~~~~~~~----~~---~-~---------~~~~ 53 (90)
T d1fnha1 2 APTDLKFTQVTPTSLSAQWTPPNVQ-----------LTGYRVRVTPKEKTGPMKE----IN---L-A---------PDSS 53 (90)
T ss_dssp CCEEEEEEEECSSCEEEEEECCSSC-----------CSEEEEEEEESSSCSCCCE----EE---E-C---------TTCC
T ss_pred CCCCEEEEEecCCEEEEEEEcccee-----------ccceEEEEEeeeCCCceEE----EE---e-C---------CCCe
Confidence 4788888777799999999854221 1234566655433211110 00 0 0 1113
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCCCccc--eEEEEc
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIPAMSA--EHVFET 189 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T 189 (580)
+.+|+||+|+|+|++||...+..+.|+ ...|.|
T Consensus 54 ~~~i~~L~p~t~Y~~~V~a~n~~g~s~~~~~~~~T 88 (90)
T d1fnha1 54 SVVVSGLMVATKYEVSVYALKDTLTSRPAQGVVTT 88 (90)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEECCCEEEEEEC
T ss_pred EEEEecccCceEEEEEEEEEeCCCCcCCEeEEEEc
Confidence 578999999999999997755333332 334554
|
| >d2haza1 b.1.2.1 (A:489-589) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neural cell adhesion molecule 1, NCAM species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.42 E-value=0.0041 Score=50.00 Aligned_cols=35 Identities=34% Similarity=0.412 Sum_probs=28.7
Q ss_pred EEEeCCCCCCCEEEEEEEeCCC---CCccceEEEEcCC
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKI---PAMSAEHVFETLP 191 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p 191 (580)
..+|+||+|+|+|++||...+. +.+|+...|+|.|
T Consensus 63 ~~~i~~L~p~t~Y~frV~A~N~~G~g~~S~~~~~~T~P 100 (101)
T d2haza1 63 IVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQP 100 (101)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred EEEecCCCCCeEEEEEEEEEeCCcCcCCCCceeEEeCC
Confidence 4688999999999999976543 2577889999987
|
| >d2cuma1 b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.40 E-value=0.0095 Score=46.79 Aligned_cols=85 Identities=15% Similarity=0.221 Sum_probs=51.8
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|..+.+.--..+++.|+|.-.... ...=.|.|....+... . ... +....
T Consensus 4 ~P~~l~~~~~~~~sv~l~W~~p~~~-----------~~~Y~v~~~~~~~~~~-~-----~~~-------------~~~~~ 53 (93)
T d2cuma1 4 APRDLEAKEVTPRTALLTWTEPPVR-----------PAGYLLSFHTPGGQTQ-E-----ILL-------------PGGIT 53 (93)
T ss_dssp CCEEEEEESCCSSCEEEEEECCSSC-----------CSEEEEEEECTTSCEE-E-----EEE-------------CSSCS
T ss_pred cCCCCEEEEeCCCEEEEEEEccccc-----------cccEEEEEEccccccE-E-----EEE-------------CCCcc
Confidence 4777777655599999999853211 1234567766443211 0 000 01224
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCCCccc--eEEEEcCC
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIPAMSA--EHVFETLP 191 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~p 191 (580)
.+.|+||+|+|.|.++|..-...+.|+ ...|+|..
T Consensus 54 ~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~tT~g 90 (93)
T d2cuma1 54 SHQLLGLFPSTSYNARLQAMWGQSLLPPVSTSFTTGG 90 (93)
T ss_dssp EEEECSCCTTCEEEEEEEEEBTTBCCCCEEEEEECCC
T ss_pred EEEEeCccCCCEEEEEEEEEeCCCCCCCEEEEEEeCC
Confidence 567999999999999997755444443 34676643
|
| >d1fnfa3 b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.38 E-value=0.01 Score=46.23 Aligned_cols=79 Identities=15% Similarity=0.167 Sum_probs=48.9
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|.++.++--+.+++.|+|.-.... ...=.|+|........... .. . ++-..
T Consensus 3 ~P~~l~v~~vt~~sv~l~W~~p~~~-----------~~~Y~i~~~~~~~~~~~~~----~~---v----------~~~~~ 54 (89)
T d1fnfa3 3 SPTGIDFSDITANSFTVHWIAPRAT-----------ITGYRIRHHPEHFSGRPRE----DR---V----------PHSRN 54 (89)
T ss_dssp CCEEEEEESCCSSEEEEEEECCSSC-----------CSEEEEEEECSCCSSCCEE----EE---E----------ETTCC
T ss_pred cCcCCEEEEecCCEEEEEEEeCCCE-----------EeeEEEEEEECCCCCceEE----EE---E----------CCCcc
Confidence 4888887765699999999853211 1233578876554332211 00 0 11234
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCCCccc
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIPAMSA 183 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~~~S~ 183 (580)
++.|+||+|+|.|.++|..-+..+.|+
T Consensus 55 ~~~i~~L~p~t~Y~~~V~a~~~~g~s~ 81 (89)
T d1fnfa3 55 SITLTNLTPGTEYVVSIVALNGREESP 81 (89)
T ss_dssp EEEEESCCTTCEEEEEEEEEETTEECC
T ss_pred EEEECCCcccCEEEEEEEEEcCCcCcC
Confidence 678899999999999997755334443
|
| >d2d9qb2 b.1.2.1 (B:204-308) Granulocyte colony-stimulating factor (GC-SF) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.32 E-value=0.0088 Score=48.21 Aligned_cols=86 Identities=15% Similarity=0.084 Sum_probs=46.8
Q ss_pred EEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEEEEEe
Q 008029 81 IALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIHHVKI 160 (580)
Q Consensus 81 i~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h~v~l 160 (580)
+.+.-..++++.|+|.-.....+. ...=.|+|....+........ . ..+-.+..+|
T Consensus 13 p~~~~~~~~~v~l~W~pp~~~~~~--------~~~y~i~y~~~~~~~~~~~~~---~-------------~~~~~~~~~i 68 (105)
T d2d9qb2 13 PEAAPPQAGCLQLSWEPWQPGLHI--------NQKCELRHKPQRGEASWALVG---P-------------LPLEALQYEL 68 (105)
T ss_dssp ------CCSCEEEEEECCGGGTTS--------CEEEEEEEEESSSCCCCEEEE---E-------------ECSCEEEEEE
T ss_pred CEeecCCCCeEEEEEcCCCCCCce--------eEEEEEEEEecCCccceeeee---c-------------ccCCcceeEE
Confidence 333333488999999854322111 123456777654332221110 0 0123466789
Q ss_pred CCCCCCCEEEEEEEeCCC------CCccceEEEEcC
Q 008029 161 DGLDPGTKYYYKCGDSKI------PAMSAEHVFETL 190 (580)
Q Consensus 161 ~gL~P~T~Y~Yrvg~~~~------~~~S~~~~F~T~ 190 (580)
++|+|+|.|.+||...+. ..||+..+++|.
T Consensus 69 ~~L~p~t~Y~frVra~n~~g~G~~S~wS~~~~~~t~ 104 (105)
T d2d9qb2 69 CGLLPATAYTLQIRCIRWPLPGHWSDWSPSLELRTT 104 (105)
T ss_dssp CSCCSCCCEEEEEEEEECSSCCCCCCCCCCEEECCC
T ss_pred ecccCCeEEEEEEEEEeCCCCCCCcCCCCCEEEeCC
Confidence 999999999999965321 146777777763
|
| >d1fnha3 b.1.2.1 (A:183-271) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.29 E-value=0.0046 Score=48.23 Aligned_cols=79 Identities=23% Similarity=0.295 Sum_probs=48.0
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|..+.+.--+.+++.|+|.-.... ...=.|+|....+.... .... .++-..
T Consensus 3 aP~nl~v~~~~~~s~~l~W~~p~~~-----------i~~Y~i~~~~~~~~~~~--------~~~~---------~~~~~~ 54 (89)
T d1fnha3 3 APSNLRFLATTPNSLLVSWQPPRAR-----------ITGYIIKYEKPGSPPRE--------VVPR---------PRPGVT 54 (89)
T ss_dssp CCEEEEEEEEETTEEEEEEECCSSC-----------CSEEEEEEECTTSCCEE--------CTTC---------CCTTCC
T ss_pred cCcCCEEEEecCCEEEEEEeCCCcC-----------CceEEEEEeeccCCccE--------EEEE---------cCCCcc
Confidence 4778877655599999999853211 02235677665432110 0000 012234
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCCCccc
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIPAMSA 183 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~~~S~ 183 (580)
.+.|+||+|+|.|.+||..-+..+.|+
T Consensus 55 ~~~~~~L~p~t~Y~~~V~a~n~~g~S~ 81 (89)
T d1fnha3 55 EATITGLEPGTEYTIYVIALKNNQKSE 81 (89)
T ss_dssp EEEEESCCTTCEEEEEEEEESSSCEEE
T ss_pred EEEEEeeeCCCEEEEEEEEEcCCCEeC
Confidence 678999999999999998765445554
|
| >d2crza1 b.1.2.1 (A:8-104) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.27 E-value=0.0065 Score=48.66 Aligned_cols=35 Identities=20% Similarity=0.364 Sum_probs=28.1
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCC---CccceEEEEcCC
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIP---AMSAEHVFETLP 191 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~p 191 (580)
+.+|++|+|++.|.|||...+.. .+|+...++|+|
T Consensus 59 ~~~v~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~T~p 96 (97)
T d2crza1 59 ECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDITTAP 96 (97)
T ss_dssp EEEEESCCTTCEEEECCEEECSSCBCCCCCCEEEECCC
T ss_pred EEEEcCCCCCEEEEEEEEEecCCeEcCCcCCCeEEeCc
Confidence 45689999999999999775533 567888898876
|
| >d3d48r2 b.1.2.1 (R:101-204) Prolactin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Prolactin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.25 E-value=0.017 Score=45.87 Aligned_cols=35 Identities=26% Similarity=0.280 Sum_probs=24.9
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCC----CCccceEEEEcC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKI----PAMSAEHVFETL 190 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~----~~~S~~~~F~T~ 190 (580)
..++|.||+|+|.|.+||...+. +.||+...++|+
T Consensus 65 ~~~~i~~L~p~t~Y~~rVrA~n~~G~ws~wS~~~~v~tP 103 (104)
T d3d48r2 65 TEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQIP 103 (104)
T ss_dssp SEEEECC--CCCEEEEEEEEEESSSCCCCCCCCEEEECC
T ss_pred cEEEECCCCCCCEEEEEEEEEeCCCCCCCCcCCEEEECc
Confidence 45678999999999999966332 357888888874
|
| >d1x5ga1 b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.24 E-value=0.0048 Score=49.73 Aligned_cols=86 Identities=20% Similarity=0.273 Sum_probs=51.0
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|..+.+.-..++++.|+|......-| ++ ..=.|+|...+......... +. .
T Consensus 13 ~P~~l~v~~~s~~si~l~W~~P~~~~g----~i----~~Y~v~~~~~~~~~~~~~~~------------------~~--~ 64 (103)
T d1x5ga1 13 PAPNLRAYAASPTSITVTWETPVSGNG----EI----QNYKLYYMEKGTDKEQDVDV------------------SS--H 64 (103)
T ss_dssp CCSSCEEEEEETTEEEEECCCCSCCSS----CC----SEEEEEEEETTCCCCCCEEE------------------CS--S
T ss_pred cCCCcEEEEccCCEEEEEEECCcCCCc----cE----EEEEEEEEeCCCceeEEEec------------------cc--c
Confidence 577777665558899999975322111 00 12236666544332221110 01 3
Q ss_pred EEEeCCCCCCCEEEEEEEeCCC---CCccceEEEEcC
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKI---PAMSAEHVFETL 190 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~ 190 (580)
.+.|+||+|+|.|.++|...+. +.+|+...++|+
T Consensus 65 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~v~T~ 101 (103)
T d1x5ga1 65 SYTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTL 101 (103)
T ss_dssp EEEECSCCTTCEEEEEEEEECSSCCCCBCCCCCEECC
T ss_pred EEecCCCCCCCEEEEEEEEEcCCcCcCCCCCEEEEcC
Confidence 4578999999999999976442 245677777775
|
| >d1x5za1 b.1.2.1 (A:8-109) Receptor-type tyrosine-protein phosphatase delta, PTPRD {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Receptor-type tyrosine-protein phosphatase delta, PTPRD species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.23 E-value=0.0055 Score=49.18 Aligned_cols=86 Identities=20% Similarity=0.329 Sum_probs=51.0
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|..+.+.-...+++.|+|..... + + ...=.|+|........... ...+. .
T Consensus 13 ~P~~~~~~~~~~~si~l~W~~p~~--~-------~-i~~Y~i~y~~~~~~~~~~~-----------------~~~~~--~ 63 (102)
T d1x5za1 13 QPLNFKAEPESETSILLSWTPPRS--D-------T-IANYELVYKDGEHGEEQRI-----------------TIEPG--T 63 (102)
T ss_dssp CCEEEEEECSSSSEEEEEEECCSC--C-------C-CCEEEECBEESSSCCCBCC-----------------EECSS--S
T ss_pred CCCCeEEEEccCCEEEEEEECCCC--C-------C-ccceEEEEEeCCCCceEEE-----------------EcCCc--C
Confidence 588888876668999999985321 1 0 0122445544322211100 00011 2
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCC---CccceEEEEcCC
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIP---AMSAEHVFETLP 191 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~p 191 (580)
+..|+||+|+|.|.+||...+.. .+|+...++|+.
T Consensus 64 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~e 101 (102)
T d1x5za1 64 SYRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQ 101 (102)
T ss_dssp EEEEECCCTTCEEEECEEEECSSCEEEECCCEEEECCC
T ss_pred EEEECCCCCCCEEEEEEEEEcCCCEeCCCCCEEEEcCC
Confidence 45789999999999999764432 467788888864
|
| >d1k85a_ b.1.2.1 (A:) Fibronectin type III domain from chitinase A1. {Bacillus circulans [TaxId: 1397]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type III domain from chitinase A1. species: Bacillus circulans [TaxId: 1397]
Probab=96.21 E-value=0.012 Score=46.05 Aligned_cols=80 Identities=20% Similarity=0.309 Sum_probs=46.5
Q ss_pred CCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccE
Q 008029 76 NFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGII 155 (580)
Q Consensus 76 ~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 155 (580)
..|..+.+.--..+++.|+|.-... ......|-...+.. ... . . ..
T Consensus 5 ~~P~~l~~~~~~~~sv~lsW~~p~~-------------~~~i~~Y~i~~~~~-~~~--~------~----------~~-- 50 (88)
T d1k85a_ 5 TAPTNLASTAQTTSSITLSWTASTD-------------NVGVTGYDVYNGTA-LAT--T------V----------TG-- 50 (88)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSC-------------CSSEEEEEEEESSS-EEE--E------E----------SS--
T ss_pred CCCCCcEEEEecCCEEEEEEeCCCC-------------CCCEEEEEEEccce-EEE--e------c----------CC--
Confidence 3688887765568999999963211 12345554422110 000 0 0 01
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCC----CCccceEEEEc
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKI----PAMSAEHVFET 189 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~----~~~S~~~~F~T 189 (580)
-..+++||+|+|+|+|||...+. ..+|+...++|
T Consensus 51 t~~~~~~L~p~t~Y~~~V~A~n~~G~~s~~S~~v~vtT 88 (88)
T d1k85a_ 51 TTATISGLAADTSYTFTVKAKDAAGNVSAASNAVSVKT 88 (88)
T ss_dssp SEEEECCCCSSCEEEEEEEEEETTTEECCCCCCEEEEC
T ss_pred CEEEECCCCCCCEEEEEEEEEECCCCcCCCCcCEEEEC
Confidence 13468999999999999976432 24466666665
|
| >d1va9a1 b.1.2.1 (A:8-116) Down syndrome cell adhesion molecule-like protein 1, DSCAML1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Down syndrome cell adhesion molecule-like protein 1, DSCAML1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.21 E-value=0.0095 Score=47.90 Aligned_cols=98 Identities=15% Similarity=0.136 Sum_probs=56.6
Q ss_pred CCCCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccc
Q 008029 74 TSNFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSG 153 (580)
Q Consensus 74 ~~~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~ 153 (580)
+...|..+.+...+.+++.|+|......... .+. ..=.|+|............ ... .....
T Consensus 8 P~~pP~~v~v~~~~~~si~l~W~~p~~~~~~-----~~i-~~y~v~~~~~~~~~~~~~~-----~~~--------~~~~~ 68 (109)
T d1va9a1 8 PDGPPMDVTLQPVTSQSIQVTWKAPKKELQN-----GVI-RGYQIGYRENSPGSNGQYS-----IVE--------MKATG 68 (109)
T ss_dssp CSSCCEEEEEEECSSSEEEEEEECCCSSTTC-----SCC-CEEEEEEEESSTTSCCSCB-----CCB--------CCCCS
T ss_pred CCCCCcCcEEEEecCCEEEEEEcCCCCCCCC-----CcE-EEEEEEEeeccccccceee-----eeE--------EecCC
Confidence 3446889988777799999999964321100 000 1224566554332111000 000 01123
Q ss_pred cEEEEEeCCCCCCCEEEEEEEeCCCC---CccceEEEEcC
Q 008029 154 IIHHVKIDGLDPGTKYYYKCGDSKIP---AMSAEHVFETL 190 (580)
Q Consensus 154 ~~h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~ 190 (580)
...+.+|++|+|+|.|.+||...+.. .+|+...|+|+
T Consensus 69 ~~~~~~i~~L~p~t~Y~~~V~a~n~~G~g~~S~~v~~~T~ 108 (109)
T d1va9a1 69 DSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTL 108 (109)
T ss_dssp SEEEEEEESCCSSCCEEEEEEEEETTEECCCCCCEECCCC
T ss_pred CeeEEEECCCCcceEEEEEEEEEcCCcCCCCCCCEEEEcC
Confidence 45677899999999999999664422 46777777774
|
| >d1fnfa1 b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.19 E-value=0.014 Score=46.17 Aligned_cols=89 Identities=18% Similarity=0.220 Sum_probs=52.3
Q ss_pred CCceEEEEeCC-CCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccE
Q 008029 77 FPEQIALAISS-PTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGII 155 (580)
Q Consensus 77 ~P~qi~la~~~-~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 155 (580)
.|.++++.-.. .++|.|+|.-... +....=.|+|....+...... ... . ++-.
T Consensus 4 PP~~l~v~~~~~ts~i~v~W~~p~~----------~~i~~Y~v~y~~~~~~~~~~~---~~~---~----------~~~~ 57 (94)
T d1fnfa1 4 PPTNLHLEANPDTGVLTVSWERSTT----------PDITGYRITTTPTNGQQGNSL---EEV---V----------HADQ 57 (94)
T ss_dssp CCEEEEEEECSSSSCEEEEEECCSC----------SSCCEEEEEEEETTTCSSCCE---EEE---E----------CTTC
T ss_pred cCcCcEEEEecCCCEEEEEeeCCCC----------CCeeEEEEEEEEecccCceEE---EEE---e----------CCCc
Confidence 58889887554 6679999974321 111223467775443221110 000 0 1123
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCCCCccceEEEEcCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKIPAMSAEHVFETLP 191 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~~~F~T~p 191 (580)
..+.|+||+|||.|..+|..-...+.|...+.+..|
T Consensus 58 ~~~~i~~L~p~t~Y~v~V~a~~~~g~s~p~s~t~~p 93 (94)
T d1fnfa1 58 SSCTFDNLSPGLEYNVSVYTVKDDKESVPISDTIIP 93 (94)
T ss_dssp CEEECCCCCTTSCEEEEEEEEETTEECCCEEEEECC
T ss_pred cEEEECCCCCCCEEEEEEEEEcCCCEeCCEEEEEEc
Confidence 567899999999999999765544666555554443
|
| >d1tdqa1 b.1.2.1 (A:1-93) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.16 E-value=0.014 Score=45.90 Aligned_cols=85 Identities=21% Similarity=0.265 Sum_probs=50.5
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|..+.+.--..+++.|+|.-.... ...-.|.|........... . ..+ ....
T Consensus 6 ~P~~l~v~~v~~~si~v~W~~p~~~-----------~~~y~i~~~~~~~~~~~~~------~--~~~---------~~~~ 57 (93)
T d1tdqa1 6 GPTQILVRDVSDTVAFVEWTPPRAK-----------VDFILLKYGLVGGEGGKTT------F--RLQ---------PPLS 57 (93)
T ss_dssp CCEEEEEEEECSSCEEEEEECCSSC-----------CSEEEEEEEESSSSCCCEE------E--EEC---------TTCS
T ss_pred cCCCCEEEEeCCCEEEEEEEccccC-----------CCceEEEEEeccCcceeeE------E--EeC---------CCce
Confidence 6888888776788999999743211 1234567766543322110 0 001 1224
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCCCccc--eEEEEc
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIPAMSA--EHVFET 189 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T 189 (580)
.++|+||+|+|+|.++|..-+..+.|+ ...|+|
T Consensus 58 ~~~i~~L~p~t~Y~v~V~a~~~~g~s~~~~~~~tT 92 (93)
T d1tdqa1 58 QYSVQALRPGSRYEVSISAVRGTNESDASSTQFTT 92 (93)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEECCCEEEEEEC
T ss_pred EEEEeCcccceEEEEEEEEEeCCCCcCCEEEEEEC
Confidence 568999999999999997654333332 345554
|
| >d2b5ic1 b.1.2.1 (C:130-224) Cytokine receptor common gamma chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor common gamma chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.14 E-value=0.0072 Score=48.11 Aligned_cols=72 Identities=14% Similarity=0.212 Sum_probs=47.8
Q ss_pred CCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccE
Q 008029 76 NFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGII 155 (580)
Q Consensus 76 ~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 155 (580)
..|..+.|.-...+++.|+|..... + ....-.|+|........... .. ...
T Consensus 4 ~~P~nl~v~~~~~~~v~l~W~~p~~--~--------~~~~y~v~y~~~~~~~~~~~-~~------------------~~~ 54 (95)
T d2b5ic1 4 WAPENLTLHKLSESQLELNWNNRFL--N--------HCLEHLVQYRTDWDHSWTEQ-SV------------------DYR 54 (95)
T ss_dssp CCCEEEEEEEEETTEEEEEEECSSC--S--------TTCEEEEEEEETTCSSCEEE-EE------------------CSS
T ss_pred cCCCCCEEEEEeCCEEEEEECCCCC--c--------eeEEEEEEEEcCCCceeeEe-ee------------------ccc
Confidence 4688888875558999999986432 1 11345688877655433221 10 011
Q ss_pred EEEEeCCCCCCCEEEEEEEeC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDS 176 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~ 176 (580)
...+|.+|+|+|.|.+||...
T Consensus 55 ~~~~~~~L~p~t~Y~frVRa~ 75 (95)
T d2b5ic1 55 HKFSLPSVDGQKRYTFRVRSR 75 (95)
T ss_dssp CEEEECSCCTTSCEEEEEEEE
T ss_pred ceeEcCCCCCCCEEEEEEEEe
Confidence 467789999999999999763
|
| >d1fnfa2 b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.13 E-value=0.018 Score=44.78 Aligned_cols=80 Identities=19% Similarity=0.203 Sum_probs=48.4
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|..+++.-.+.+++.|+|.-... + ....=.|+|....+...... .. . ++...
T Consensus 3 pP~~l~~~~~~~~sv~l~W~~p~~--~--------~~~~y~v~y~~~~~~~~~~~----~~---~----------~~~~~ 55 (91)
T d1fnfa2 3 PPTDLRFTNIGPDTMRVTWAPPPS--I--------DLTNFLVRYSPVKNEEDVAE----LS---I----------SPSDN 55 (91)
T ss_dssp CCEEEEEESCCSSCEEEEEECCTT--C--------CCSEEEEEEEETTCTTCCEE----EE---E----------CTTCC
T ss_pred cCCceEEEEeCCCEEEEEEEecCC--C--------CcceeEEEEEECCCCccEEE----EE---e----------CCCce
Confidence 478888876569999999975321 1 01234577876544332211 00 0 11224
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCCCccc
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIPAMSA 183 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~~~S~ 183 (580)
.+.|+||+|+|.|.++|..-...+.|+
T Consensus 56 ~~~i~~L~p~t~Y~~~V~a~~~~g~S~ 82 (91)
T d1fnfa2 56 AVVLTNLLPGTEYVVSVSSVYEQHEST 82 (91)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEECC
T ss_pred EEEEeceeCCCEEEEEEEEEcCCCCCC
Confidence 578999999999999997654334443
|
| >d1erna2 b.1.2.1 (A:117-221) Erythropoietin (EPO) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Erythropoietin (EPO) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.12 E-value=0.021 Score=45.83 Aligned_cols=91 Identities=13% Similarity=0.124 Sum_probs=52.3
Q ss_pred CCCceEEEEeCC-CCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCcccccccc
Q 008029 76 NFPEQIALAISS-PTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGI 154 (580)
Q Consensus 76 ~~P~qi~la~~~-~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 154 (580)
..|..+.+.... ++.+.|+|......-+. ....=.|+|....+...... ... ..-
T Consensus 6 dPP~nl~v~~~~~~~~l~v~W~~P~~~~~~-------~~~~Y~v~y~~~~~~~~~~~----~~~-------------~~~ 61 (105)
T d1erna2 6 DAPVGLVARLADESGHVVLRWLPPPETPMT-------SHIRYEVDVSAGNGAGSVQR----VEI-------------LEG 61 (105)
T ss_dssp CCCEEEEEEECCC-CCEEEEEECSSSCSCG-------GGEEEEEEEEEC-CCCEEEE----EEE-------------CTT
T ss_pred CCCCCCEEEEecCCCcEEEEeeeccccccc-------eEEEEEEEEecCCCCCceEE----Eee-------------cCC
Confidence 468999998877 78899999864321110 00123566665543222111 000 011
Q ss_pred EEEEEeCCCCCCCEEEEEEEeCCC--------CCccceEEEEcC
Q 008029 155 IHHVKIDGLDPGTKYYYKCGDSKI--------PAMSAEHVFETL 190 (580)
Q Consensus 155 ~h~v~l~gL~P~T~Y~Yrvg~~~~--------~~~S~~~~F~T~ 190 (580)
-..+.|.+|+|+|+|.+||..... ..||+...++|+
T Consensus 62 ~t~~~i~~L~p~t~Y~~rVRar~~~~~~~G~WSeWS~~v~~~tP 105 (105)
T d1erna2 62 RTECVLSNLRGRTRYTFAVRARMAEPSFGGFWSAWSEPVSLLTP 105 (105)
T ss_dssp CCEEEECSCCSSCEEEEEEEEEECSSSCCBCCCCCCCCEEEECC
T ss_pred ccEEEEeCCCCCcEEEEEEEEEECCCCCCCCCCCCCCCEEeeCc
Confidence 245679999999999999966311 146666777773
|
| >d1f6fb2 b.1.2.1 (B:101-203) Prolactin receptor {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Prolactin receptor species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.10 E-value=0.024 Score=45.22 Aligned_cols=91 Identities=19% Similarity=0.209 Sum_probs=49.5
Q ss_pred CCCceEEEEeC---C-CCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccc
Q 008029 76 NFPEQIALAIS---S-PTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYT 151 (580)
Q Consensus 76 ~~P~qi~la~~---~-~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~ 151 (580)
..|..+.+.+. . .+++.|+|..........-. -...=.|+|.............
T Consensus 4 ~pP~nl~~~~~~~~~~~~~v~vsW~pP~~~~~~~~~----~~l~Y~v~~~~~~~~~~~~~~~------------------ 61 (103)
T d1f6fb2 4 EPPRNLTLEVKQLKDKKTYLWVKWSPPTITDVKTGW----FTMEYEIRLKPEEAEEWEIHFT------------------ 61 (103)
T ss_dssp CCCEEEEEEEC----CCCCEEEEEECCTTSCTTTTS----SCEEEEEEEEESSCSCCEEEEE------------------
T ss_pred CCCCCCEEEEEecccCCCEEEEEECCCCcccCCCCc----EEEEEEEEEEeCCCcceeeecc------------------
Confidence 45887776543 2 78899999864321000000 0011234555544433322110
Q ss_pred cccEEEEEeCCCCCCCEEEEEEEeCCC----CCccceEEEEc
Q 008029 152 SGIIHHVKIDGLDPGTKYYYKCGDSKI----PAMSAEHVFET 189 (580)
Q Consensus 152 ~~~~h~v~l~gL~P~T~Y~Yrvg~~~~----~~~S~~~~F~T 189 (580)
..-...+|.||+|||+|.+||..... ..||+...++|
T Consensus 62 -~~~~~~~i~~L~p~t~Y~~rVra~~~~G~wS~wS~~~~~~~ 102 (103)
T d1f6fb2 62 -GHQTQFKVFDLYPGQKYLVQTRCKPDHGYWSRWSQESSVEM 102 (103)
T ss_dssp -ETCSEEEECCCCTTCEEEEEEEEEESSSCCCCCCCCEEEEC
T ss_pred -cceeEEEeCCCCcceEEEEEEEEEeCCCCCCCCcCceeeEC
Confidence 01235688999999999999966442 24666666655
|
| >d1j8ka_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.08 E-value=0.0095 Score=46.77 Aligned_cols=85 Identities=19% Similarity=0.213 Sum_probs=50.7
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|.++.+.--..+++.|+|.-.... ...-.++|....+... . .... .++...
T Consensus 4 ~P~~l~v~~vt~~sv~l~W~~p~~~-----------~~~y~i~~~~~~~~~~-------~-~~~~---------~~~~~~ 55 (94)
T d1j8ka_ 4 RPKGLAFTDVDVDSIKIAWESPQGQ-----------VSRYRVTYSSPEDGIH-------E-LFPA---------PDGEED 55 (94)
T ss_dssp CCCCCEEEEEETTEEEEECCCCSSC-----------CSCEEEEEEETTTEEE-------E-ECCC---------CCSSCC
T ss_pred CCCCCEEEEecCCEEEEEEeCCCcc-----------ccceEEEEEeecCCCc-------e-EEEe---------cCCCcc
Confidence 5778877655589999999643211 1234567765543211 0 0000 012234
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCCCccce--EEEEc
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIPAMSAE--HVFET 189 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~--~~F~T 189 (580)
..+|+||+|+|.|.++|...+..+.|+. ..++|
T Consensus 56 ~~~i~~L~p~t~Y~~~V~a~~~~g~S~p~~~~~~T 90 (94)
T d1j8ka_ 56 TAELQGLRPGSEYTVSVVALHDDMESQPLIGTQST 90 (94)
T ss_dssp EEEECSCCCCSEEEEEEEECSSSCCCCCEEEEEEC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCCCcCCEEEEEEE
Confidence 6778999999999999987665555543 34555
|
| >d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.07 E-value=0.002 Score=53.53 Aligned_cols=38 Identities=24% Similarity=0.272 Sum_probs=30.8
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCCC---CccceEEEEcCCCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKIP---AMSAEHVFETLPLP 193 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~p~~ 193 (580)
.+++|++|+|+|.|.+||...+.. .+|+...|+|.+..
T Consensus 80 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 120 (125)
T d1uena_ 80 THGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGS 120 (125)
T ss_dssp SEEEEESCCSSCEEEEEEEEEESSCEEEECCCEEEECCCCC
T ss_pred cEEEECCCCCCCEEEEEEEEEeCCcccCCCCCEEEECCCCC
Confidence 568899999999999999765533 57888999998644
|
| >d1iarb2 b.1.2.1 (B:97-197) Interleukin-4 receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-4 receptor alpha chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.97 E-value=0.013 Score=46.50 Aligned_cols=82 Identities=7% Similarity=0.034 Sum_probs=40.3
Q ss_pred CCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccE
Q 008029 76 NFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGII 155 (580)
Q Consensus 76 ~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 155 (580)
..|..|.+.-...+++.|+|.......+... ....=.|+|....+....... ... ..+..
T Consensus 3 ~~P~~l~v~~~~~~s~~v~W~~P~~~~~~~~-----~~~~y~v~y~~~~~~~~~~~~------~~~---------~~~~~ 62 (101)
T d1iarb2 3 RAPGNLTVHTNVSDTLLLTWSNPYPPDNYLY-----NHLTYAVNIWSENDPADFRIY------NVT---------YLEPS 62 (101)
T ss_dssp CCCEEEEEC----CCEEEEEECSSCTTSTTG-----GGCEEEEEEEESSSCSCEEEE------EEC---------SSCCE
T ss_pred ccCCcCEEEEEeCCeEEEEEccccCCCCccc-----eeeEEEEeeecccceeeeeee------eec---------cCccc
Confidence 4688888766668899999997533211100 001235677665543332110 000 01233
Q ss_pred EEEEeCCCCCCCEEEEEEEeCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSK 177 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~ 177 (580)
..+.|.+|+|+|+|.+||....
T Consensus 63 ~~~~i~~L~p~t~Y~~rVrA~~ 84 (101)
T d1iarb2 63 LRIAASTLKSGISYRARVRAWA 84 (101)
T ss_dssp EEECC-----CCCEEEEEEEEC
T ss_pred eEEEECCCCCCCEEEEEEEEEc
Confidence 5678899999999999997643
|
| >d1tdqa3 b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=95.95 E-value=0.01 Score=46.07 Aligned_cols=76 Identities=17% Similarity=0.235 Sum_probs=47.5
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|..+.++--..+++.|+|.-.... ...=.|+|....+...... . ++-.-
T Consensus 3 ~P~nl~v~~~~~~s~~l~W~~p~~~-----------~~~Y~v~~~~~~~~~~~~~------~-------------~~~~~ 52 (86)
T d1tdqa3 3 SPRDLMVTASSETSISLIWTKASGP-----------IDHYRITFTPSSGISSEVT------V-------------PRDRT 52 (86)
T ss_dssp CCEEEEEEEECSSCEEEEEECCCSC-----------CSEEEEEEECSSSCCEEEE------E-------------ESSCS
T ss_pred cCCCCEEEEecCCEEEEEEeCCCCC-----------ccceEEEEecccccceEEE------e-------------CCCcc
Confidence 4888888766799999999864321 1234677876543221110 0 01123
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCCCcc
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIPAMS 182 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~~~S 182 (580)
++.|+||+|+|.|.++|..-...+.|
T Consensus 53 ~~~~~~L~p~t~Y~v~V~a~~~~~~s 78 (86)
T d1tdqa3 53 SYTLTDLEPGAEYIISITAERGRQQS 78 (86)
T ss_dssp EEEECCCCTTCCEEEEEEEEETTEEC
T ss_pred EEEECCCccccEEEEEEEEEcCCCEE
Confidence 57889999999999999765433333
|
| >d1x5ha1 b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.91 E-value=0.014 Score=48.06 Aligned_cols=96 Identities=22% Similarity=0.303 Sum_probs=55.0
Q ss_pred CCCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCcccccccc
Q 008029 75 SNFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGI 154 (580)
Q Consensus 75 ~~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 154 (580)
...|..+.+...+++++.|+|....... + ......|...= ............. ..+.
T Consensus 12 ~~~P~~v~~~~~~~~si~v~W~~p~~~~--------~--ng~i~~Y~v~y----~~~~~~~~~~~~~---------~~~~ 68 (119)
T d1x5ha1 12 SAAPQNLSLEVRNSKSIMIHWQPPAPAT--------Q--NGQITGYKIRY----RKASRKSDVTETL---------VSGT 68 (119)
T ss_dssp CCCCEEEEEECCSSSEEEEEEECCCTTT--------C--CSCEEEEBCEE----EETTEEEEEECCB---------CCTT
T ss_pred CCCCcCeEEEEecCcEEEEEEEcccccC--------C--CCCEEEEEEEE----eecccccceeeee---------cCCC
Confidence 3458888887777899999997532110 0 11233444310 0000011100000 1123
Q ss_pred EEEEEeCCCCCCCEEEEEEEeCCCC---CccceEEEEcCCCC
Q 008029 155 IHHVKIDGLDPGTKYYYKCGDSKIP---AMSAEHVFETLPLP 193 (580)
Q Consensus 155 ~h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~p~~ 193 (580)
-....|+||+|+|.|.+||...+.. .+|+...|+|.+..
T Consensus 69 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~G~~S~~~~~~T~~~~ 110 (119)
T d1x5ha1 69 QLSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFESD 110 (119)
T ss_dssp CCEEEEECCCSSCEEEEECEEEETTEEEEECCCEEEECCSSC
T ss_pred ccEEEeCCCCCCCEEEEEEEEEcCCcCCCCCCCEEEEeCCCC
Confidence 3567899999999999999654322 47888999997644
|
| >d1t70a_ d.159.1.9 (A:) Putative phosphatase DR1281 {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Putative phosphatase DR1281 species: Deinococcus radiodurans [TaxId: 1299]
Probab=95.89 E-value=0.052 Score=51.05 Aligned_cols=189 Identities=15% Similarity=0.162 Sum_probs=106.6
Q ss_pred eEEEEEcccCCCCCh---HHHHHHHHHCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHHHhh
Q 008029 200 HRIAVIGDLGLTSNS---STTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRFM 276 (580)
Q Consensus 200 ~rfav~gD~g~~~~~---~~~l~~i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~~~l 276 (580)
+||+++||.=..... .+.+..+ +++.||||..|.++-. |.|.. +...+++++
T Consensus 1 MkILfiGDIvG~~Gr~~v~~~Lp~l-k~~~DfVIaNgENaa~-------G~Git---------------~~~~~~l~~-- 55 (255)
T d1t70a_ 1 MRVLFIGDVFGQPGRRVLQNHLPTI-RPQFDFVIVNMENSAG-------GFGMH---------------RDAARGALE-- 55 (255)
T ss_dssp CEEEEECCBBHHHHHHHHHHHHHHH-GGGCSEEEEECTBTTT-------TSSCC---------------HHHHHHHHH--
T ss_pred CeEEEEecCCCHHHHHHHHHHhHHH-HhhCCEEEECCccCCC-------CcCCC---------------HHHHHHHHH--
Confidence 589999997443221 2233444 3468999999999843 22210 112222222
Q ss_pred hhhccCCCeEEecCCCCCCCCcccccHHHHHh----hcCCCCCC--CCCCCcceEEEEeCcEEEEEEc--CcccCCCcHH
Q 008029 277 EPLTSRVPMMVIEGNHEIEPQVAGITFKSYLT----RFAVPSEE--SGSNSNFYYSFNAGGVHFIMLG--AYVDYNSTGA 348 (580)
Q Consensus 277 ~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~----~f~~P~~~--~~~~~~~yYsfd~G~v~fI~Ld--t~~~~~~~~~ 348 (580)
..+- ..+.|||=+.. +....|.. +..-|.|- .+..+.-|+.|+..+.++.+++ .+........
T Consensus 56 ----~GvD-viT~GNH~wdk----kei~~~i~~~~~~ilRP~N~p~~~~PG~G~~i~~~~g~ki~ViNl~Gr~fM~~~d~ 126 (255)
T d1t70a_ 56 ----AGAG-CLTLGNHAWHH----KDIYPMLSEDTYPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDN 126 (255)
T ss_dssp ----HTCS-EEECCTTTTSS----TTHHHHHHTTCSCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSC
T ss_pred ----cCCc-EEEcCchhhcc----hhHHHHHhhcchhhhhhhccCCCCCCCceEEEEeeccCcEEEEEeccccccCcccC
Confidence 2344 35689998752 33344432 23345443 2345667788888765655554 3333233333
Q ss_pred HHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEEccccCceeEeeccccccCCC
Q 008029 349 QYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDAC 428 (580)
Q Consensus 349 Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR~~pv~n~~~~~~ 428 (580)
-.+-+++.|++ .+.+.+||=+|.=.- .| ..+| -.+.+-+|.+|+-=|+|.- ..+..+-|+
T Consensus 127 PF~~~d~~l~~---~~~~~i~VDfHaEaT-------SE----K~A~-g~~ldGrvsav~GTHTHV~-----TaD~rIlp~ 186 (255)
T d1t70a_ 127 PFRTMDALLER---DDLGTVFVDFHAEAT-------SE----KEAM-GWHLAGRVAAVIGTHTHVP-----TADTRILKG 186 (255)
T ss_dssp HHHHHHHHTTC---SSCCEEEEEEECSCH-------HH----HHHH-HHHHTTSSSEEEEESSCSC-----BSCCEEETT
T ss_pred HHHHHHHHHhh---cCCCeEEEEccchhH-------HH----HHHH-HhhhcCcEEEEEecCcccc-----cccceEecC
Confidence 44556666655 345678888886311 11 1222 3455779999999999963 222222378
Q ss_pred CcEEEEe-CCCCccc
Q 008029 429 GPVYITV-GDGGNIE 442 (580)
Q Consensus 429 G~vyIv~-G~gG~~e 442 (580)
|+.|++- |..|...
T Consensus 187 GTay~TDvGMtG~~~ 201 (255)
T d1t70a_ 187 GTAYQTDAGFTGPHD 201 (255)
T ss_dssp TEEEESCCCCBEESS
T ss_pred CcEEEecCccccchh
Confidence 9999864 6666653
|
| >d1fnha2 b.1.2.1 (A:93-182) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.88 E-value=0.018 Score=44.87 Aligned_cols=78 Identities=21% Similarity=0.219 Sum_probs=47.6
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|.+++++--..+++.|+|.-.... ...=.|+|....+...... .. +.-..
T Consensus 4 pP~~l~v~~~~~~si~v~W~~p~~~-----------~~~Y~i~~~~~~~~~~~~~---------~~---------~~~~~ 54 (90)
T d1fnha2 4 PPRRARVTDATETTITISWRTKTET-----------ITGFQVDAVPANGQTPIQR---------TI---------KPDVR 54 (90)
T ss_dssp CCEEEEEEEECSSEEEEEEECCSSC-----------CCCEEEEEEESSSSCCEEE---------EC---------CTTCS
T ss_pred cCCCCEEEEecCCEEEEEEECCCCC-----------CceeEEEEEEccCCceEEE---------ec---------CCCcc
Confidence 4888888766699999999843211 1233567765543222111 00 11124
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCCCccc
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIPAMSA 183 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~~~S~ 183 (580)
...|+||+|||.|.++|..-+..+.|+
T Consensus 55 ~~~i~~L~p~t~Y~~~V~a~~~~g~s~ 81 (90)
T d1fnha2 55 SYTITGLQPGTDYKIYLYTLNDNARSS 81 (90)
T ss_dssp EEEEESCCTTCEEEEEEEEEETTEECC
T ss_pred EEEeCCCCCCcEEEEEEEEEeCCCCcC
Confidence 557899999999999997655334443
|
| >d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: lambda ser/thr protein phosphatase species: Bacteriophage lambda [TaxId: 10710]
Probab=95.81 E-value=0.0025 Score=58.77 Aligned_cols=38 Identities=32% Similarity=0.392 Sum_probs=27.3
Q ss_pred EEEEEcccCCCCCh-HHHHHHHHH-CCCCEEEEccccccc
Q 008029 201 RIAVIGDLGLTSNS-STTVDHLIQ-NDPSLILMVGDLTYA 238 (580)
Q Consensus 201 rfav~gD~g~~~~~-~~~l~~i~~-~~pDfvl~~GDl~Y~ 238 (580)
||.++||+|..... .++++++.. ...|.++++||+++.
T Consensus 14 rI~vIgDIHG~~~~L~~lL~~i~~~~~~d~lv~lGD~vDr 53 (219)
T d1g5ba_ 14 NIWVVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVDR 53 (219)
T ss_dssp CEEEECCCTTCHHHHHHHHHHHTCCTTTCEEEECSCCSSS
T ss_pred eEEEEEecccCHHHHHHHHHHcCCCCCCCEEEEeCCcccc
Confidence 79999999976433 344555432 356899999999964
|
| >d1wfoa1 b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.80 E-value=0.021 Score=46.80 Aligned_cols=89 Identities=17% Similarity=0.200 Sum_probs=49.7
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|..+.+.-...+++.|+|.-....-|. ...=.|+|........... .... ...-.
T Consensus 23 ~P~~~~~~~~~~~sv~v~W~~P~~~~g~--------i~~Y~i~y~~~~~~~~~~~---~~~~-------------~~~~~ 78 (117)
T d1wfoa1 23 PPMGILFPEVRTTSVRLIWQPPAAPNGI--------ILAYQITHRLNTTTANTAT---VEVL-------------APSAR 78 (117)
T ss_dssp CCCCCEEEEECSSEEEEECCCCSCCCSC--------CCEEEEEEEESSCCCSCCC---EEEE-------------CTTCC
T ss_pred CCCCcEEEEecCCEEEEEEECCCCCCCc--------eEEEeeeeeeccCCCceEe---EEec-------------CCceE
Confidence 5777777665699999999743321110 0123466655433221110 0000 01123
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCCC---ccceEEEEc
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIPA---MSAEHVFET 189 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~~---~S~~~~F~T 189 (580)
...|+||+|+|.|.+||...+..+ +|+...++|
T Consensus 79 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~tT 114 (117)
T d1wfoa1 79 QYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTT 114 (117)
T ss_dssp EEEEESCCSSSEEEEEEEEECSSCEEEEEEEEEECC
T ss_pred EEEECCCCCCCEEEEEEEEECCCcCCCCcCCEEEEC
Confidence 456899999999999998765333 445555555
|
| >d1uc6a_ b.1.2.1 (A:) Ciliary neurotrophic factor receptor alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ciliary neurotrophic factor receptor alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.74 E-value=0.034 Score=44.68 Aligned_cols=90 Identities=11% Similarity=0.037 Sum_probs=50.4
Q ss_pred CCCceEEEEeCC--CCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccc
Q 008029 76 NFPEQIALAISS--PTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSG 153 (580)
Q Consensus 76 ~~P~qi~la~~~--~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~ 153 (580)
..|..+.+.... ++++.|+|.......... . -...=.++|....+.....+. ..
T Consensus 9 ~PP~~l~v~~~~~~~~~l~l~W~~P~~~~~~~----~-~~~~y~~~~~~~~~~~~~~~~-------------------~~ 64 (109)
T d1uc6a_ 9 DPPENVVARPVPSNPRRLEVTWQTPSTWPDPE----S-FPLKFFLRYRPLILDQWQHVE-------------------LS 64 (109)
T ss_dssp CCCEEEEEEECTTCTTCEEEEEECCTTCCCTT----T-TTBCEEEEEEESSSCCCCCEE-------------------ES
T ss_pred CCCCCCEEEEEecCCCEEEEEEeCCcccCCCC----e-eEEEEEEEEeecCCCceEEec-------------------cC
Confidence 358888887543 789999999753210000 0 011234555554433222110 01
Q ss_pred cEEEEEeCCCCCCCEEEEEEEeCCC--C---CccceEEEEc
Q 008029 154 IIHHVKIDGLDPGTKYYYKCGDSKI--P---AMSAEHVFET 189 (580)
Q Consensus 154 ~~h~v~l~gL~P~T~Y~Yrvg~~~~--~---~~S~~~~F~T 189 (580)
.-...+|.+|+|+|.|.+||...+. . .||+...++|
T Consensus 65 ~~~~~~i~~L~~~t~Y~~rVrA~~~~~g~wS~WS~~~~~tt 105 (109)
T d1uc6a_ 65 NGTAHTITDAYAGKEYIIQVAAKDNEIGTWSDWSVAAHATP 105 (109)
T ss_dssp SCSEEEETTCCSSSCEEEEEECCBSSSCCCCCCCEEEEECC
T ss_pred CceeEEeCCCCCCCEEEEEEEEEECCCCCcCCCCCCEEeEC
Confidence 1235678999999999999976332 1 4555566554
|
| >d2z06a1 d.159.1.10 (A:1-252) Hypothetical protein TTHA0625 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TTHA0625-like domain: Hypothetical protein TTHA0625 species: Thermus thermophilus [TaxId: 274]
Probab=95.67 E-value=0.15 Score=47.56 Aligned_cols=189 Identities=17% Similarity=0.238 Sum_probs=104.8
Q ss_pred eEEEEEcccCCCCChH---HHHHHHHHCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHHHhh
Q 008029 200 HRIAVIGDLGLTSNSS---TTVDHLIQNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGRFM 276 (580)
Q Consensus 200 ~rfav~gD~g~~~~~~---~~l~~i~~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~~~l 276 (580)
+||+++||.=....-. ..+.++ +.+.||||..|.++-. |.|.. +...+++++
T Consensus 1 MkiLfiGDIvG~~Gr~~v~~~Lp~L-k~~~DfVIaNgENaa~-------G~Git---------------~k~~~~L~~-- 55 (252)
T d2z06a1 1 MRVLFIGDVMAEPGLRAVGLHLPDI-RDRYDLVIANGENAAR-------GKGLD---------------RRSYRLLRE-- 55 (252)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHH-GGGCSEEEEECTTTTT-------TSSCC---------------HHHHHHHHH--
T ss_pred CeEEEEeccCCHHHHHHHHHHhHHH-HhhCCEEEEeeeccCC-------CcCCC---------------HHHHHHHHH--
Confidence 6899999985432222 223333 3468999999999742 22210 112222221
Q ss_pred hhhccCCCeEEecCCCCCCCCcccccHHHHHh--hcCCCCCCC-CCCCcceEEEEeCcEEEEEEcC--cccCCCcHHHHH
Q 008029 277 EPLTSRVPMMVIEGNHEIEPQVAGITFKSYLT--RFAVPSEES-GSNSNFYYSFNAGGVHFIMLGA--YVDYNSTGAQYA 351 (580)
Q Consensus 277 ~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~--~f~~P~~~~-~~~~~~yYsfd~G~v~fI~Ldt--~~~~~~~~~Q~~ 351 (580)
..+- ..+.|||=+... ....|.+ +.-.|.|-+ +..+.-|+.|+.++.++.+++- +......+.-++
T Consensus 56 ----~GVD-vIT~GNH~wdkk----ei~~~i~~~~llRP~N~p~~~PG~G~~i~~~~g~ki~ViNl~Gr~fm~~~d~PF~ 126 (252)
T d2z06a1 56 ----AGVD-LVSLGNHAWDHK----EVYALLESEPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFR 126 (252)
T ss_dssp ----HTCC-EEECCTTTTSCT----THHHHHHHSSEECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHH
T ss_pred ----hCCC-EEEcCcccccch----hhhhhhccccccchhhccCCCCCCcEEEEccCCceEEEEEecccccCCCCCCHHH
Confidence 2344 367899987532 2223332 233444432 3345667888888766666553 322222223334
Q ss_pred HHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEEccccCceeEeeccccccCCCCcE
Q 008029 352 WLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDACGPV 431 (580)
Q Consensus 352 WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR~~pv~n~~~~~~G~v 431 (580)
-+++.|.+ .+++.+||=+|.=.- .+ ..+ .-.+.+-+|.+|+-=|+|.- ..+..+-|+|+.
T Consensus 127 ~~d~~~~~---~~~~~i~VDfHaEaT-------SE----K~A-~g~~ldGrvsavvGTHTHV~-----TaD~rILp~GTa 186 (252)
T d2z06a1 127 ALDRLLEE---EKADYVLVEVHAEAT-------SE----KMA-LAHYLDGRASAVLGTHTHVP-----TLDATRLPKGTL 186 (252)
T ss_dssp HHHHHHHH---CCCSEEEEEEECSCH-------HH----HHH-HHHHHBTTBSEEEEESSCSC-----BSCCEECTTSCE
T ss_pred HHHHHHhh---cCccEEEEEcccchh-------hh----hee-eeEecCCCEEEEEecCcccc-----ccccEEecCCeE
Confidence 44444554 345678888886311 11 122 33456779999999999963 222233478999
Q ss_pred EEEe-CCCCccc
Q 008029 432 YITV-GDGGNIE 442 (580)
Q Consensus 432 yIv~-G~gG~~e 442 (580)
|++- |..|...
T Consensus 187 yiTDvGM~G~~~ 198 (252)
T d2z06a1 187 YQTDVGMTGTYH 198 (252)
T ss_dssp EESCCCCBEESS
T ss_pred EEccCccccchh
Confidence 9964 7677654
|
| >d1cd9b2 b.1.2.1 (B:108-213) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.63 E-value=0.029 Score=45.22 Aligned_cols=78 Identities=14% Similarity=0.172 Sum_probs=45.2
Q ss_pred CCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCC-CcceEEeeEEEEEeeecccCCccccccccEEEEEeCCCCC
Q 008029 87 SPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSG-KYTSKRGGNATVYSQLYPFKGLLNYTSGIIHHVKIDGLDP 165 (580)
Q Consensus 87 ~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~-~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h~v~l~gL~P 165 (580)
.++++.|+|......-+. ...-.|+|....+ ..+..+. . . ..-.+..+|++|+|
T Consensus 20 ~~~~i~v~W~pp~~~~~~--------~~~Y~i~y~~~~~~~~w~~v~-~------~----------~~~~~~~~l~~L~p 74 (106)
T d1cd9b2 20 QPGCLWLSWKPWKPSEYM--------EQECELRYQPQLKGANWTLVF-H------L----------PSSKDQFELCGLHQ 74 (106)
T ss_dssp CCSCEEEEEECCGGGTTS--------CEEEEEEEEESSTTCCCEEEE-E------E----------ESCEEEEEECCCCS
T ss_pred CCCEEEEEEcCcccCCcc--------ceEEEEEEeeccccccceeee-c------c----------cCCceEEEEeccCC
Confidence 488999999854322110 1234677875433 2232221 0 0 11236677999999
Q ss_pred CCEEEEEEEeCCC------CCccceEEEEc
Q 008029 166 GTKYYYKCGDSKI------PAMSAEHVFET 189 (580)
Q Consensus 166 ~T~Y~Yrvg~~~~------~~~S~~~~F~T 189 (580)
+|.|.+||..... ..||...+|+|
T Consensus 75 ~t~Y~frVra~~~~g~g~wS~wS~~~~~~~ 104 (106)
T d1cd9b2 75 APVYTLQMRCIRSSLPGFWSPWSPGLQLRP 104 (106)
T ss_dssp CSCEEEEEEEEESSSCCCCCCCCCCEEECC
T ss_pred CeEEEEEEEEEeCCCCCCCcCCCCCeEecC
Confidence 9999999955321 14566677765
|
| >d1bpva_ b.1.2.1 (A:) Type I titin module {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Type I titin module species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.62 E-value=0.015 Score=46.57 Aligned_cols=80 Identities=10% Similarity=0.109 Sum_probs=43.6
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|.++.+.-.+.+++.|+|.-....-|..+ ..-.++|............ .......
T Consensus 5 pP~~p~~~~~t~~sv~lsW~~P~~~~g~~i-------~~y~~~~~~~~~~~~~~~~-----------------~~~~~~~ 60 (104)
T d1bpva_ 5 PPGKPVPLNITRHTVTLKWAKPEYTGGFKI-------TSYIVEKRDLPNGRWLKAN-----------------FSNILEN 60 (104)
T ss_dssp CCCCCEEEEEETTEEEEECCCCSCCTTCCC-------SCCEEEEEETTSCCCEECC-----------------CSCCCSS
T ss_pred CCCCCEEEEecCCEEEEEEEeccccCcceE-------EEEEEEeecccccceeEEE-----------------eecccee
Confidence 455554443347899999975322111111 2345566554432221110 0011224
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCCC
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIPA 180 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~~ 180 (580)
..+++||+|+|+|.|||...+..+
T Consensus 61 ~~~i~~L~p~t~Y~frV~A~n~~G 84 (104)
T d1bpva_ 61 EFTVSGLTEDAAYEFRVIAKNAAG 84 (104)
T ss_dssp EEEECSCCSSCCEEEEEEEECTTS
T ss_pred EEEEcCCCCCCEEEEEEEEEECCC
Confidence 567899999999999998765333
|
| >d2fnba_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.56 E-value=0.018 Score=45.28 Aligned_cols=79 Identities=11% Similarity=0.123 Sum_probs=45.8
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|..+.+.-...+++.|+|.-... . ....=.|+|........... ... +.-..
T Consensus 8 ~P~~l~v~~~t~~si~l~W~~p~~---~-------~i~~Y~v~~~~~~~~~~~~~--------~~~---------~~~~t 60 (95)
T d2fnba_ 8 QLTDLSFVDITDSSIGLRWTPLNS---S-------TIIGYRITVVAAGEGIPIFE--------DFV---------DSSVG 60 (95)
T ss_dssp CCTTCEEECCCSSCEEEECCCCCC---S-------SCCEEEEEEEEETSCCEEEE--------EEC---------CSSCS
T ss_pred cCCCeEEEEEcCCEEEEEEEecCC---c-------eEEeEEEEEEEeeccceEEE--------EEe---------CCCCe
Confidence 577888766669999999964321 1 01123456655433211110 010 11224
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCCCcc
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIPAMS 182 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~~~S 182 (580)
...|+||+|||.|.++|..-+..+.|
T Consensus 61 ~~~i~~L~p~t~Y~~~V~a~~~~g~s 86 (95)
T d2fnba_ 61 YYTVTGLEPGIDYDISVITLINGGES 86 (95)
T ss_dssp EEEECCCCTTSEEEEEEEEEETTEEC
T ss_pred EEEEecccCCEEEEEEEEEEeCCcEe
Confidence 56789999999999999765533443
|
| >d1cfba1 b.1.2.1 (A:610-709) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neuroglian, two amino proximal Fn3 repeats species: Drosophila melanogaster [TaxId: 7227]
Probab=95.55 E-value=0.019 Score=45.57 Aligned_cols=80 Identities=9% Similarity=0.137 Sum_probs=45.4
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|..+.+..+ .+++.|+|.-.... |. |+ ..=.|+|................ + -.+
T Consensus 8 ~P~~~~v~~~-~~sv~lsW~pp~~~-~~---~i----~~Y~v~~~~~~~~~~~~~~~~~~------~----------~~~ 62 (100)
T d1cfba1 8 APKLTGITCQ-ADKAEIHWEQQGDN-RS---PI----LHYTIQFNTSFTPASWDAAYEKV------P----------NTD 62 (100)
T ss_dssp CCEEEEEEEC-SSEEEEEEECCCCT-TS---CC----CEEEEEEEESSSTTCCEEEEEEE------E----------TTC
T ss_pred cCcCcEEEEc-CCEEEEEEcCCccc-cc---ce----EEEEEEEecCCCCceeeEEeeec------C----------Cce
Confidence 6888887654 57899999743221 11 10 23456776654433222111100 0 012
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCCCc
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIPAM 181 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~~~ 181 (580)
+..+++|+|+|.|.+||...+..++
T Consensus 63 ~~~~~~L~p~t~Y~frV~A~n~~G~ 87 (100)
T d1cfba1 63 SSFVVQMSPWANYTFRVIAFNKIGA 87 (100)
T ss_dssp SEEEEECCSSEEEEEEEEEEETTEE
T ss_pred EEEEecCCCCCEEEEEEEEEeCCcC
Confidence 3457799999999999977553333
|
| >d2gysa2 b.1.2.1 (A:104-217) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.53 E-value=0.049 Score=44.06 Aligned_cols=99 Identities=13% Similarity=0.213 Sum_probs=54.7
Q ss_pred CCCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCcccccccc
Q 008029 75 SNFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGI 154 (580)
Q Consensus 75 ~~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 154 (580)
...|..+++..+ .+++.|+|.......+... +.--...-.|+|............ ... ...
T Consensus 6 P~pP~nl~v~~~-~~~~~lsW~~P~~~~~~~~--~~~~~~~y~v~~~~~~~~~~~~~~---~~~-------------~~~ 66 (114)
T d2gysa2 6 PPEPRDLQISTD-QDHFLLTWSVALGSPQSHW--LSPGDLEFEVVYKRLQDSWEDAAI---LLS-------------NTS 66 (114)
T ss_dssp CCCCEEEEEEEE-TTEEEEEEECCC-----CC--SCGGGEEEEEEEEETTSCSTTCEE---EEE-------------SSS
T ss_pred CCcCCCeEEEEe-CCEEEEECCCCcccccccc--eeeeEEEEEEEEeccCCceEEEEE---eec-------------cCc
Confidence 457999988643 6789999987532111000 000000123555554432221110 000 012
Q ss_pred EEEEEeCCCCCCCEEEEEEEeCCC---------CCccceEEEEcCCC
Q 008029 155 IHHVKIDGLDPGTKYYYKCGDSKI---------PAMSAEHVFETLPL 192 (580)
Q Consensus 155 ~h~v~l~gL~P~T~Y~Yrvg~~~~---------~~~S~~~~F~T~p~ 192 (580)
--.+.+.+|.|+|.|..||..... ..||+...|+|.|.
T Consensus 67 ~~~~~~~~L~p~t~Y~~rVRa~~~~g~~~~g~wS~WS~~v~~~t~pg 113 (114)
T d2gysa2 67 QATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPG 113 (114)
T ss_dssp EEEECTTTCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCC
T ss_pred eEEEEeCCCCCCcEEEEEEEEEeCCCCCCCCCccCCcCCEeeeCcCC
Confidence 246778999999999999966321 25788899999764
|
| >d1bqua2 b.1.2.1 (A:100-214) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor gp130 cytokine-binding domains species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.51 E-value=0.018 Score=46.87 Aligned_cols=94 Identities=16% Similarity=0.157 Sum_probs=53.9
Q ss_pred CCCceEEEEeCC--CCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccc
Q 008029 76 NFPEQIALAISS--PTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSG 153 (580)
Q Consensus 76 ~~P~qi~la~~~--~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~ 153 (580)
..|..+.+...+ .+++.|+|.-....-|. ...=.|+|....+...... . .....+
T Consensus 6 ~pP~~~~v~~~~~~~~si~v~W~~p~~~~~~--------~~~Y~v~y~~~~~~~~~~~-------~--------~~~~~~ 62 (115)
T d1bqua2 6 NPPHNLSVINSEELSSILKLTWTNPSIKSVI--------ILKYNIQYRTKDASTWSQI-------P--------PEDTAS 62 (115)
T ss_dssp CCCEEEEEECC--CCSCEEEEEECCGGGGTS--------CEEEEEEEEETTCSSCEEC-------C--------GGGGCS
T ss_pred CCCCCCEEEEeccCCCEEEEEEeeccccccc--------eeeeeeeeeeeeeeeeecc-------c--------cccccc
Confidence 468888877655 88999999853221110 0123456665443322110 0 001122
Q ss_pred cEEEEEeCCCCCCCEEEEEEEeCCC------CCccceEEEEcCCC
Q 008029 154 IIHHVKIDGLDPGTKYYYKCGDSKI------PAMSAEHVFETLPL 192 (580)
Q Consensus 154 ~~h~v~l~gL~P~T~Y~Yrvg~~~~------~~~S~~~~F~T~p~ 192 (580)
-..+++|++|+|++.|.+||...+. ..||....++|...
T Consensus 63 ~~~~~~i~~L~~~t~Y~~~V~a~~~~G~g~~S~~S~~~~~~T~~~ 107 (115)
T d1bqua2 63 TRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYED 107 (115)
T ss_dssp CCSEEEECSCCSSEEEEEEEEEEETTSCSCCCCCCCCEEEEECCC
T ss_pred cccEEeeCCCccCcEEEEEEEEEeCCCccCCcCCcCCEEEECCCC
Confidence 3357789999999999999954221 13567788888543
|
| >d1x5ya1 b.1.2.1 (A:8-105) Myosin binding protein C, fast-type {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Myosin binding protein C, fast-type species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.47 E-value=0.011 Score=47.14 Aligned_cols=83 Identities=12% Similarity=0.129 Sum_probs=47.1
Q ss_pred CCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccE
Q 008029 76 NFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGII 155 (580)
Q Consensus 76 ~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 155 (580)
..|..+.+.-...+++.|+|.-....-|..+ ..=.|+|...++..+..+. . . ....
T Consensus 3 ~~P~~~~v~~~~~~sv~l~W~pP~~~~~~~i-------~~Y~V~~~~~~~~~~~~~~----------~-~------~~~~ 58 (98)
T d1x5ya1 3 SAPQHLTVEDVTDTTTTLKWRPPDRIGAGGI-------DGYLVEYCLEGSEEWVPAN----------K-E------PVER 58 (98)
T ss_dssp CCCEEEEEEEECSSEEEEEEECCSCCCSSCC-------CEEEEEEEETTCCCCEESS----------S-S------CBSS
T ss_pred CCCcCcEEEEccCCEEEEEEECCCcCCCCCc-------eEEEEEEEecCcceeEEee----------e-e------cCce
Confidence 3578887765568999999985322111111 1234667655433221110 0 0 0111
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCCCCcc
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKIPAMS 182 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S 182 (580)
...+|+||+|++.|.|||...+..+.|
T Consensus 59 ~~~~v~~L~~~~~Y~frV~A~n~~G~s 85 (98)
T d1x5ya1 59 CGFTVKDLPTGARILFRVVGVNIAGRS 85 (98)
T ss_dssp SEEEEECCCTTCCEEEEEEEEETTEEC
T ss_pred eEEEECCCcCCeEEEEEEEEECCCcCC
Confidence 345789999999999999875533333
|
| >d1wisa1 b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.36 E-value=0.025 Score=45.54 Aligned_cols=85 Identities=12% Similarity=0.005 Sum_probs=47.3
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|..+.+.-...+++.|+|.-... -|.. ...-.|+|................ .. ......
T Consensus 13 ~P~~~~~~~~~~~sv~l~W~pp~~-~~~~-------i~~y~v~~~~~~~~~~~~~~~~~~---~~---------~~~~~~ 72 (111)
T d1wisa1 13 PPTNLGISNIGPRSVTLQFRPGYD-GKTS-------ISRWLVEAQVGVVGEGEEWLLIHQ---LS---------NEPDAR 72 (111)
T ss_dssp CCEEEEEESCCSSCEEEEEECCCC-CSSC-------CSEEEEEECBSCCSTTSCCEEEEE---EE---------SCTTCS
T ss_pred CCCCCEEEEcCCCEEEEEEeCCCC-CCCc-------eeEEEEeeeecccCCCcceeeeee---ee---------ccccee
Confidence 588888775569999999974321 1111 123456676544332211100000 00 011223
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCCCc
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIPAM 181 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~~~ 181 (580)
...|.||+|++.|.+||...+..+.
T Consensus 73 ~~~v~~L~p~t~Y~frV~A~N~~G~ 97 (111)
T d1wisa1 73 SMEVPDLNPFTCYSFRMRQVNIVGT 97 (111)
T ss_dssp EEEECSCCTTSEECCCCEEECSSCB
T ss_pred EEEeCCCCCCCEEEEEEEEEcCCcC
Confidence 4678999999999999987654343
|
| >d1wf5a1 b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.32 E-value=0.013 Score=47.59 Aligned_cols=23 Identities=22% Similarity=0.413 Sum_probs=19.0
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKI 178 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~ 178 (580)
..++|+||+|+|+|.|||...+.
T Consensus 69 ~~~~i~~L~p~t~Y~frV~A~N~ 91 (108)
T d1wf5a1 69 TSVTVKGLVPARSYQFRLCAVND 91 (108)
T ss_dssp CEEEEESCCTTCEEEEEEEEEES
T ss_pred cEEEECCCCCCCEEEEEEEEEcC
Confidence 35678999999999999977553
|
| >d1v5ja_ b.1.2.1 (A:) KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1355 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.24 E-value=0.023 Score=45.94 Aligned_cols=92 Identities=13% Similarity=0.072 Sum_probs=53.1
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|..+.++. ..+++.|+|.-....-+ ++ ..=.|+|........ .. .... +...+
T Consensus 10 PP~~~~~~~-t~~si~l~W~pp~~~~~----~i----~~Y~v~~~~~~~~~~-~~-------~~~~---------~~~~~ 63 (108)
T d1v5ja_ 10 PPRGLVAVR-TPRGVLLHWDPPELVPK----RL----DGYVLEGRQGSQGWE-VL-------DPAV---------AGTET 63 (108)
T ss_dssp CCEEEEEEE-CSSSEEEEEECCSCCSS----CC----CBEEEEEEETTCCCE-EE-------EEEE---------CSSCC
T ss_pred cCCCeEEEE-cCCEEEEEEEecccCCC----ce----eEEEEEeeeeeeeee-ec-------cccc---------cceee
Confidence 477776544 47899999985332111 00 123567766543321 11 1110 11235
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCC---CccceEEEEcCCCCC
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIP---AMSAEHVFETLPLPS 194 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~p~~~ 194 (580)
.++|+||+|+|.|.|||..-+.. .+|+...++|....+
T Consensus 64 ~~~i~~L~p~t~Y~~rV~A~n~~g~s~~S~~~~~~T~~~~~ 104 (108)
T d1v5ja_ 64 ELLVPGLIKDVLYEFRLVAFAGSFVSDPSNTANVSTSGLSG 104 (108)
T ss_dssp EEECCCCCTTSCEECCBEEEETTEEEEECSCCCCCCSSCSS
T ss_pred eEEEEeccCCcEEEEEEEEEeCCCEeCCcCceEEECCCCCC
Confidence 67899999999999999765433 345666777755443
|
| >d1x3da1 b.1.2.1 (A:8-112) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.24 E-value=0.027 Score=45.14 Aligned_cols=89 Identities=18% Similarity=0.273 Sum_probs=50.4
Q ss_pred CCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccE
Q 008029 76 NFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGII 155 (580)
Q Consensus 76 ~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 155 (580)
..|..+.+.-...+++.|+|.-.... +..+ ..=.|+|............ +. +.-
T Consensus 12 ~~P~~~~~~~~~~~sv~l~W~pp~~~-~~~i-------~~Y~i~~~~~~~~~~~~~~-----~~-------------~~~ 65 (105)
T d1x3da1 12 DIPNPPRIANRTKNSLTLQWKAPSDN-GSKI-------QNFVLEWDEGKGNGEFCQC-----YM-------------GSQ 65 (105)
T ss_dssp CCCCCCEEEEEETTEEEEECCCCCCC-SSCE-------EEEEEEECTTTSSSCCEEE-----EE-------------ESC
T ss_pred cCCCCCEEEEccCCEEEEEEECCCCC-cCcc-------EEEEEEEecCCCcceeEEE-----ec-------------CCc
Confidence 35777777665689999999753211 1000 1123344433322211110 10 111
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCC---CCccceEEEEcC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKI---PAMSAEHVFETL 190 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~ 190 (580)
....+.+|+|+|+|.+||...+. ..+|+...|+|.
T Consensus 66 ~~~~~~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~T~ 103 (105)
T d1x3da1 66 KQFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTS 103 (105)
T ss_dssp SEEEEESCCTTCEEEEECCEEESSCBCCCCCCEEEECS
T ss_pred cEEEecCCcCCcEEEEEEEEECCCeEcCCCCcEEEECC
Confidence 34567899999999999965332 357788888874
|
| >d1wfua_ b.1.2.1 (A:) Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.21 E-value=0.015 Score=48.01 Aligned_cols=38 Identities=18% Similarity=0.232 Sum_probs=29.5
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCC---CccceEEEEcCCCCC
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIP---AMSAEHVFETLPLPS 194 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~p~~~ 194 (580)
..+|++|+|+|+|.+||...+.. .+|+...++|.+...
T Consensus 76 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~p 116 (120)
T d1wfua_ 76 RHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRESG 116 (120)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCCCCC
T ss_pred EEeCCCCCCCcEeeEEEEEEeCCcEeCCCCCEEEEeCCCCc
Confidence 35689999999999999875533 467888999976543
|
| >d2ic2a1 b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Hedgehog receptor iHog species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=95.15 E-value=0.061 Score=43.12 Aligned_cols=30 Identities=13% Similarity=0.184 Sum_probs=23.6
Q ss_pred ccEEEEEeCCCCCCCEEEEEEEeCCCCCcc
Q 008029 153 GIIHHVKIDGLDPGTKYYYKCGDSKIPAMS 182 (580)
Q Consensus 153 ~~~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S 182 (580)
+.-...+|+||+|+|+|.+||...+..+.|
T Consensus 65 ~~~~~~~i~~L~p~t~Y~frV~A~N~~G~s 94 (107)
T d2ic2a1 65 GKSFTASVTDLKPQHTYRFRILAVYSNNDN 94 (107)
T ss_dssp EEEEEEEECSCCSSEEEEEEEEEEETTSCE
T ss_pred cceeEEEECCCcCCcEEEEEEEEEcCCCCC
Confidence 345678899999999999999876644444
|
| >d1qg3a2 b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Integrin beta-4 subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.06 E-value=0.011 Score=47.27 Aligned_cols=86 Identities=19% Similarity=0.249 Sum_probs=46.5
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|..+.+.....+++.|+|.-....-|. + ..=.|+|.......... +...... .. ..--.
T Consensus 5 ~P~~~~~~~~~~~sv~v~W~~P~~~~g~----i----~~Y~i~~~~~~~~~~~~--~~~~~~~-~~---------~~~~~ 64 (103)
T d1qg3a2 5 EPGRLAFNVVSSTVTQLSWAEPAETNGE----I----TAYEVCYGLVNDDNRPI--GPMKKVL-VD---------NPKNR 64 (103)
T ss_dssp CCCCCEEEEEETTEEEEECCCCSCCSSC----C----CEEEEEEEEBCTTSCBC--SCCEEEE-EC---------CTTCC
T ss_pred cCCCcEEEEecCCEEEEEEEECccCCCC----c----eEEEEEeeccccccccc--cceEEEE-ec---------CCCce
Confidence 5778877776789999999854321110 0 12235554443221110 0000000 00 11124
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCCCcc
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIPAMS 182 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~~~S 182 (580)
+++|+||+|++.|.+||...+..+++
T Consensus 65 ~~~i~~L~p~t~Y~~~V~A~n~~G~g 90 (103)
T d1qg3a2 65 MLLIENLRESQPYRYTVKARNGAGWG 90 (103)
T ss_dssp EEEECCCCTTCCEEEEEEEEETTEEC
T ss_pred EEEEeecCCCCEEEEEEEEEcCCccC
Confidence 67899999999999999765533443
|
| >d1ueya_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.88 E-value=0.036 Score=45.84 Aligned_cols=93 Identities=16% Similarity=0.100 Sum_probs=51.8
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|..|.+...+.+++.|+|.-.... +..+ ..-.++|............-.. . ...+
T Consensus 19 ~P~~~~v~~~~~~sv~l~W~~p~~~-~~~i-------~~~~~~~~~~~~~~~~~~~~~~----~------------~~~~ 74 (127)
T d1ueya_ 19 PPFDLELTDQLDKSVQLSWTPGDDN-NSPI-------TKFIIEYEDAMHKPGLWHHQTE----V------------SGTQ 74 (127)
T ss_dssp CCEEEEEECCSSSCEEEEEECCCCC-SSCE-------EEEEEEEEBTTTCTTCEEEEEE----E------------ESSC
T ss_pred CCCCcEEEEecCCeEEEEEeCCccc-ccce-------EeeeeeeccccccceeEEEEee----c------------CCce
Confidence 5888888766699999999753321 1100 2334555544333222111000 0 0123
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCC---Cccce-EEEEcCCCC
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIP---AMSAE-HVFETLPLP 193 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~-~~F~T~p~~ 193 (580)
...|.+|+|++.|.+||..-+.. .+|+. ..|+|.+..
T Consensus 75 ~~~i~~L~p~t~Y~frV~A~n~~G~s~~S~~s~~~~t~~~~ 115 (127)
T d1ueya_ 75 TTAQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASE 115 (127)
T ss_dssp CEEEECCCTTCEECCEEEEEESSCBCCCCSCCCCEECCCSS
T ss_pred EEEECCCccCCEEEEEEEEEcCCcCcCCcCCcccEEcCCCC
Confidence 45678999999999999664433 34433 456676643
|
| >d1x5ia1 b.1.2.1 (A:8-120) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.82 E-value=0.041 Score=44.67 Aligned_cols=89 Identities=19% Similarity=0.143 Sum_probs=51.9
Q ss_pred CCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccE
Q 008029 76 NFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGII 155 (580)
Q Consensus 76 ~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 155 (580)
..|..+++... .+++.|+|.-....-| . + ..=.|+|+....... . ... ++..
T Consensus 22 ~~P~~~~~~~~-~~si~v~W~~p~~~~g-~---i----~~Y~i~~~~~~~~~~-~-----~~~-------------~~~~ 73 (113)
T d1x5ia1 22 EVPSSLHVRPL-VTSIVVSWTPPENQNI-V---V----RGYAIGYGIGSPHAQ-T-----IKV-------------DYKQ 73 (113)
T ss_dssp CSCSEEEEEEE-TTEEEEEEECCSCTTB-C---C----CEEEEEECSSCGGGE-E-----EEC-------------CTTC
T ss_pred CCCEeeeeeeC-CCEEEEEEEccccCCc-c---E----EEEEEEeeeccccce-e-----eee-------------eCCc
Confidence 35777877643 6799999984322111 0 0 123566765433211 1 000 1122
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCCCCccc--eEEEEcCCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKIPAMSA--EHVFETLPL 192 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~p~ 192 (580)
...+|.+|+|++.|.+||...+..+.|+ ...++|.|.
T Consensus 74 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~~~~~~~T~P~ 112 (113)
T d1x5ia1 74 RYYTIENLDPSSHYVITLKAFNNVGEGIPLYESAVTRPH 112 (113)
T ss_dssp CEEEECSCCSSCEECCEEEEECSSCBCCCCCCCEECCCC
T ss_pred cEEEEeccccCcEEEEEEEEECCCcCCCCeeeEEEeCCC
Confidence 4567999999999999998766445553 346677663
|
| >d1cfba2 b.1.2.1 (A:710-814) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neuroglian, two amino proximal Fn3 repeats species: Drosophila melanogaster [TaxId: 7227]
Probab=94.74 E-value=0.042 Score=44.01 Aligned_cols=83 Identities=12% Similarity=0.091 Sum_probs=47.3
Q ss_pred CCCCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccc
Q 008029 74 TSNFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSG 153 (580)
Q Consensus 74 ~~~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~ 153 (580)
+...|..|.+.-...+++.|+|.-....... ++ ...=.|+|........... ... .+.
T Consensus 4 P~~~P~~v~~~~~~~~si~v~W~p~~~~~~n-----g~-i~~Y~I~y~~~~~~~~~~~---~~~-------------~~~ 61 (105)
T d1cfba2 4 PFKNPDNVVGQGTEPNNLVISWTPMPEIEHN-----AP-NFHYYVSWKRDIPAAAWEN---NNI-------------FDW 61 (105)
T ss_dssp CSCCCSCCEEECSSTTCEEEECCCCCGGGTC-----SS-SCEEEEEEEESSTTCCCEE---EEE-------------CCT
T ss_pred CCCCCcCeEEEEccCCeEEEEEeCCChhhcC-----ce-EEEEEEEeeeeccccceeE---EEe-------------cCC
Confidence 3456888888776689999999642211000 00 0123466655433221110 000 012
Q ss_pred cEEEEEeCCCCCCCEEEEEEEeCCC
Q 008029 154 IIHHVKIDGLDPGTKYYYKCGDSKI 178 (580)
Q Consensus 154 ~~h~v~l~gL~P~T~Y~Yrvg~~~~ 178 (580)
.....+|.+|+|+|.|.+||...+.
T Consensus 62 ~~~~~~i~~L~p~t~Y~~~V~A~N~ 86 (105)
T d1cfba2 62 RQNNIVIADQPTFVKYLIKVVAIND 86 (105)
T ss_dssp TCCEEEECSCCSSCEEEEEEEEEET
T ss_pred CccEEEECCCCCCCEEEEEEEEEeC
Confidence 2356788999999999999977553
|
| >d1wk0a_ b.1.2.1 (A:) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.49 E-value=0.062 Score=45.07 Aligned_cols=38 Identities=21% Similarity=0.321 Sum_probs=29.8
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCC---CCccceEEEEcCCCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKI---PAMSAEHVFETLPLP 193 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~ 193 (580)
..++|+||+|+|.|.+||...+. ..+|+...|+|.+.+
T Consensus 82 ~~~~i~~L~P~t~Y~f~V~A~n~~G~g~~S~~~~~~T~~~~ 122 (137)
T d1wk0a_ 82 TNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSCE 122 (137)
T ss_dssp SEEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCCSS
T ss_pred cEEEECCCCCCcEEEEEEEEEcCCcccCCCCCEEEECCCCC
Confidence 45789999999999999966442 256788899997644
|
| >d2dn7a1 b.1.2.1 (A:8-101) Receptor-type tyrosine-protein phosphatase F, PTPRF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Receptor-type tyrosine-protein phosphatase F, PTPRF species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.40 E-value=0.19 Score=38.79 Aligned_cols=78 Identities=13% Similarity=0.297 Sum_probs=44.3
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|. +.++-...+++.|+|.-....-| . ...=.|+|........... .+. ....
T Consensus 3 ~P~-~~~~~~~~~sv~l~W~pP~~~~g-~-------i~~Y~i~~~~~~~~~~~~~-----~~~-------------~~~~ 55 (94)
T d2dn7a1 3 RPT-MMISTTAMNTALLQWHPPKELPG-E-------LLGYRLQYCRADEARPNTI-----DFG-------------KDDQ 55 (94)
T ss_dssp CCE-EEEEECSTTEEEEEEECCSSCSS-C-------CCEEEEEEEETTCSSCEEE-----EEE-------------TTCC
T ss_pred CCc-EeEEEEeCCEEEEEEeCCCCCCC-c-------eEEEEEEEEEcCCCCcEEE-----EcC-------------CCcc
Confidence 453 44444458899999985432111 1 1234567766554332211 010 1123
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCCCc
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIPAM 181 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~~~ 181 (580)
..+|+||+|+|.|.+||...+..+.
T Consensus 56 ~~~i~~L~p~t~Y~~~V~A~n~~G~ 80 (94)
T d2dn7a1 56 HFTVTGLHKGTTYIFRLAAKNRAGL 80 (94)
T ss_dssp EEEEECCCTTCEEEEEEEEEETTEE
T ss_pred EEEEEccCCeeEEEEEEEEEcCCcC
Confidence 4578999999999999976553333
|
| >d2crma1 b.1.2.1 (A:8-114) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.39 E-value=0.03 Score=44.89 Aligned_cols=33 Identities=24% Similarity=0.209 Sum_probs=24.3
Q ss_pred EEEeCCCCCCCEEEEEEEeCCCC---CccceEEEEc
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKIP---AMSAEHVFET 189 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T 189 (580)
...++||+|+|+|.+||...+.. .+|+...++|
T Consensus 69 ~~~i~~L~p~t~Y~~rV~A~n~~G~s~~S~~v~v~T 104 (107)
T d2crma1 69 EHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQT 104 (107)
T ss_dssp EEEECSCCTTSCEEEEEEEEETTEECCCCCCCCCCC
T ss_pred EEEEeccCCCCEEEEEEEEECCCcCcCCCCcEEEEC
Confidence 34789999999999999764432 4566666666
|
| >d1t71a_ d.159.1.9 (A:) Hypothetical protein MPN349 {Mycoplasma pneumoniae [TaxId: 2104]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Hypothetical protein MPN349 species: Mycoplasma pneumoniae [TaxId: 2104]
Probab=94.11 E-value=0.26 Score=46.74 Aligned_cols=189 Identities=16% Similarity=0.168 Sum_probs=102.6
Q ss_pred CeEEEEEcccCCCCChH---HHHHHHH-HCCCCEEEEcccccccccccccCCCCCcccccCCCCCccccccHHHHHHHHH
Q 008029 199 PHRIAVIGDLGLTSNSS---TTVDHLI-QNDPSLILMVGDLTYANQYLTTGGKAASCYSCAFPDAPIRETYQPRWDGWGR 274 (580)
Q Consensus 199 ~~rfav~gD~g~~~~~~---~~l~~i~-~~~pDfvl~~GDl~Y~d~~~~~GG~~~~c~~~~~~~~p~~e~y~~~wd~~~~ 274 (580)
.+||+++||.=....-. +.+..+. +.++||||..|-++-. |.|.. +...+++.+
T Consensus 4 ~MkILfiGDIvG~~GR~~v~~~Lp~Lr~~~~iDfVIaNgENaa~-------G~Git---------------~k~~~eL~~ 61 (281)
T d1t71a_ 4 SIKFIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTH-------GKGLS---------------LKHYEFLKE 61 (281)
T ss_dssp CCEEEEECEEBHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTT-------TSSCC---------------HHHHHHHHH
T ss_pred cceEEEEEccCCHHHHHHHHHHhHHHHHHhCCCEEEECCccCCC-------CcCCC---------------HHHHHHHHH
Confidence 58999999974332211 2233343 3599999999999843 22210 111222211
Q ss_pred hhhhhccCCCeEEecCCCCCCCCcccccHHHHHh---hcCCCCCC----C-CCCCcceEEEEeCcEEEEEEcC--cccCC
Q 008029 275 FMEPLTSRVPMMVIEGNHEIEPQVAGITFKSYLT---RFAVPSEE----S-GSNSNFYYSFNAGGVHFIMLGA--YVDYN 344 (580)
Q Consensus 275 ~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~---~f~~P~~~----~-~~~~~~yYsfd~G~v~fI~Ldt--~~~~~ 344 (580)
..+- +.+.|||=+.. +....|.. +.-.|.|- + +..+.-|..++..+.++.+++- +....
T Consensus 62 ------~GvD-vIT~GNH~wd~----kei~~~i~~~~~llRP~N~p~~~p~~~pG~G~~i~~~~~~~i~Vinl~G~~fm~ 130 (281)
T d1t71a_ 62 ------AGVN-YITMGNHTWFQ----KLDLAVVINKKDLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPL 130 (281)
T ss_dssp ------HTCC-EEECCTTTTCC----GGGHHHHTTCTTEECBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCC
T ss_pred ------hCCc-EEEcCchhhhc----hhhHHHHhhcccccccccccccccCCCCCceEEEEEccccceeeeeeccccccc
Confidence 2344 36789998742 23333332 22234432 2 2345668888877655555543 22111
Q ss_pred --CcHHHHHHHHHHHHhccCCCCCeEEEEeCCCCccCCCCCcchhHHHHHHHHHHHHhcCCcEEEEccccCceeEeeccc
Q 008029 345 --STGAQYAWLKEDLHKLDRTVTPWLAAAWHPPWYNSYSSHYQEFECMRQEMEALLYQYGVDIVFSGHVHAYERMNRVYN 422 (580)
Q Consensus 345 --~~~~Q~~WLe~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~Ll~ky~VdlvlsGH~H~yeR~~pv~n 422 (580)
.......-+++.+.+ .+++.+||=+|.=.- .| ..+| -.+.+-+|.+|+-=|+|.- ..+
T Consensus 131 ~~~~~~pf~~~~~~~~~---~~~d~i~VDfHaEAT-------SE----K~A~-g~~lDGrvsaVvGTHTHV~-----TaD 190 (281)
T d1t71a_ 131 PFKTTNPFKVLKELILK---RDCDLHIVDFHAETT-------SE----KNAF-CMAFDGYVTTIFGTHTHVP-----SAD 190 (281)
T ss_dssp SSCBCCHHHHHHHHHTT---CCCSEEEEEEECSCH-------HH----HHHH-HHHHTTTSSEEEEESSSSC-----CTT
T ss_pred cccccHHHHHHHHhhcc---cCCCeEEEEeccchh-------hh----hhhh-eeeeCCcEEEEEecCcccc-----cCc
Confidence 122333444444443 456778998886311 11 1222 3455779999999999952 223
Q ss_pred cccCCCCcEEEEe-CCCCc
Q 008029 423 YTLDACGPVYITV-GDGGN 440 (580)
Q Consensus 423 ~~~~~~G~vyIv~-G~gG~ 440 (580)
..+-|+|+.|++- |..|.
T Consensus 191 ~rILp~GTAyiTDvGMtG~ 209 (281)
T d1t71a_ 191 LRITPKGSAYITDVGMCGP 209 (281)
T ss_dssp CEECTTSCEEESCCCEEBC
T ss_pred cccccCCeEEEecCccccC
Confidence 3334789999853 55553
|
| >d1cd9b1 b.1.2.1 (B:1-107) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.10 E-value=0.12 Score=41.20 Aligned_cols=83 Identities=8% Similarity=-0.019 Sum_probs=45.9
Q ss_pred CCCceEE-EEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCcccccccc
Q 008029 76 NFPEQIA-LAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGI 154 (580)
Q Consensus 76 ~~P~qi~-la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 154 (580)
..|..|. ++-...++|+++|.-+.. -|. | ..-.+.|............-...... .....
T Consensus 6 ~~P~~v~~i~~~~~~sv~~sW~p~~d-~~~------~--~~y~~~y~~~~~~~~~~~~~~~~~~~----------~~~~~ 66 (107)
T d1cd9b1 6 ASPSNLSCLMHLTTNSLVCQWEPGPE-THL------P--TSFILKSFRSRADCQYQGDTIPDCVA----------KKRQN 66 (107)
T ss_dssp CCCEEEEEEEETTTTEEEEEEECCSC-CSS------C--CEEEEEEEECCGGGCSCCCEEEEEEC----------CTTCC
T ss_pred CCCcCCEEEEecCCCEEEEEEcCCCC-CCC------C--cceeEEEEEeecccceeeeeeeeecc----------ccCcc
Confidence 4677786 554448899999975422 111 1 23345555443222111100000000 00123
Q ss_pred EEEEEeCCCCCCCEEEEEEEeCC
Q 008029 155 IHHVKIDGLDPGTKYYYKCGDSK 177 (580)
Q Consensus 155 ~h~v~l~gL~P~T~Y~Yrvg~~~ 177 (580)
.-.+.+++|+|++.|++||...+
T Consensus 67 ~~~~~~~~L~~~t~Y~frV~A~N 89 (107)
T d1cd9b1 67 NCSIPRKNLLLYQYMAIWVQAEN 89 (107)
T ss_dssp EEEEEGGGCCTTSCEEEEEEEEE
T ss_pred ccEEEcCCCCcCceEEEEEEEEe
Confidence 46778899999999999998766
|
| >d1uema_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1568 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.08 E-value=0.042 Score=44.98 Aligned_cols=22 Identities=23% Similarity=0.383 Sum_probs=18.2
Q ss_pred EEEeCCCCCCCEEEEEEEeCCC
Q 008029 157 HVKIDGLDPGTKYYYKCGDSKI 178 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~~ 178 (580)
..+|+||+|+|.|.+||...+.
T Consensus 73 ~~~v~~L~p~t~Y~frV~A~N~ 94 (117)
T d1uema_ 73 LYTVRGLRPNTIYLFMVRAINP 94 (117)
T ss_dssp EEEECSCCTTCEEEEEEEEEET
T ss_pred cceECCCCCCCEEEEEEEEEeC
Confidence 4568999999999999976543
|
| >d1n26a3 b.1.2.1 (A:196-299) Interleukin-6 receptor alpha chain, domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-6 receptor alpha chain, domains 2 and 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.06 E-value=0.1 Score=41.40 Aligned_cols=77 Identities=16% Similarity=0.185 Sum_probs=45.6
Q ss_pred CCCceEEEEeCC--CCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccc
Q 008029 76 NFPEQIALAISS--PTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSG 153 (580)
Q Consensus 76 ~~P~qi~la~~~--~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~ 153 (580)
..|..+.+.... ++++.|+|.......+. .....-.|+|............ . .+
T Consensus 3 ~pP~~l~v~~~~~~~~~l~v~W~~P~~~~~~------~~~~~y~v~~~~~~~~~~~~~~-----~-------------~~ 58 (104)
T d1n26a3 3 DPPANITVTAVARNPRWLSVTWQDPHSWNSS------FYRLRFELRYRAERSKTFTTWM-----V-------------KD 58 (104)
T ss_dssp CCCEEEEEEECTTCTTCEEEEEECCTTCCCS------SSCEEEEEEEEETTCSCCEEEE-----C-------------GG
T ss_pred cCCCCCEEEEEecCCCEEEEEEEeeeecCCC------ceeEEEEEEEeeCCCCceeeec-----c-------------cc
Confidence 468888877643 78999999964321000 0012345677665543322110 0 01
Q ss_pred cEEEEEeCCCCCCCEEEEEEEeC
Q 008029 154 IIHHVKIDGLDPGTKYYYKCGDS 176 (580)
Q Consensus 154 ~~h~v~l~gL~P~T~Y~Yrvg~~ 176 (580)
......|.+|+|+|.|.+||...
T Consensus 59 ~~~~~~i~~L~p~t~Y~~rVra~ 81 (104)
T d1n26a3 59 LQHHCVIHDAWSGLRHVVQLRAQ 81 (104)
T ss_dssp GCSEEEESSCCTTCCEEEEEEEE
T ss_pred ceEEEEECCCCCCCEEEEEEEEE
Confidence 22456789999999999999754
|
| >d1wfna1 b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.96 E-value=0.077 Score=42.30 Aligned_cols=76 Identities=16% Similarity=0.201 Sum_probs=42.9
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEE
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIH 156 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h 156 (580)
.|..+.+.-...+++.|+|.......|. ...=.|+|.......... .. ...+...
T Consensus 13 ~p~~l~~~~~~~~sv~l~W~~P~~~ng~--------i~~Y~i~~~~~~~~~~~~----~~-------------~~~~~~~ 67 (106)
T d1wfna1 13 PVGHLSFSEILDTSLKVSWQEPGEKNGI--------LTGYRISWEEYNRTNTRV----TH-------------YLPNVTL 67 (106)
T ss_dssp CCSCCEEESCCSSEEEEECCCCTTCCSC--------CCEEEEEEEESSCGGGCC----CE-------------EECSSCC
T ss_pred CCCCcEEEEecCCEEEEEEECCCCCCCc--------EEeEEEEEEECCCCcceE----EE-------------ecCCCee
Confidence 5677776655588999999743221110 012235554433221110 00 0112234
Q ss_pred EEEeCCCCCCCEEEEEEEeCC
Q 008029 157 HVKIDGLDPGTKYYYKCGDSK 177 (580)
Q Consensus 157 ~v~l~gL~P~T~Y~Yrvg~~~ 177 (580)
..+|+||+|+|.|.+||...+
T Consensus 68 ~~~i~~L~p~t~Y~~~V~A~n 88 (106)
T d1wfna1 68 EYRVTGLTALTTYTIEVAAMT 88 (106)
T ss_dssp EEEEESCCTTCEEEEEEEEEC
T ss_pred EEEEccCCCCCEEEEEEEEEC
Confidence 567899999999999998655
|
| >d1wfta_ b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Host cell factor 2, HCF-2 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=93.90 E-value=0.062 Score=44.24 Aligned_cols=106 Identities=8% Similarity=0.129 Sum_probs=56.6
Q ss_pred CCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEe--eEEEEEeeecccCCcccccccc
Q 008029 77 FPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRG--GNATVYSQLYPFKGLLNYTSGI 154 (580)
Q Consensus 77 ~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~--g~~~~y~~~~p~~g~~~~~~~~ 154 (580)
.|..|.++. ..+++.|+|.-....-| .+ ..=.|+|............ .....+... .-.... .+-
T Consensus 10 aP~~v~v~~-~~~si~l~W~~P~~~~g-~i-------~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~ 76 (123)
T d1wfta_ 10 APSTVRISK-NVDGIHLSWEPPTSPSG-NI-------LEYSAYLAIRTAQMQDNPSQLVFMRIYCGL---KTSCTV-TAG 76 (123)
T ss_dssp CCEEEEEEE-CSSEEEEEEECCSSCCS-SC-------CCEEEEEEECSSCCCSCSCCCEEEEEEEES---CSEEEE-EHH
T ss_pred CCcccEEEe-CCCEEEEEecCchhcCC-ce-------EEEEEEEEECCCCCccccceeeeEEEecCC---ceeEee-cCC
Confidence 688888765 37899999995432211 11 2345677664432211100 000111100 000000 000
Q ss_pred EEEEEeCCCCCCCEEEEEEEeCCCC---CccceEEEEcCCCCCC
Q 008029 155 IHHVKIDGLDPGTKYYYKCGDSKIP---AMSAEHVFETLPLPSP 195 (580)
Q Consensus 155 ~h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~p~~~~ 195 (580)
.-..+|.+|+|+|.|.+||...+.. .+|++..|+|....++
T Consensus 77 ~~~~~i~~L~p~t~Y~frV~A~N~~G~Gp~S~~~~~~t~~~~~P 120 (123)
T d1wfta_ 77 QLANAHIDYTSRPAIVFRISAKNEKGYGPATQIRWLQGNSKSGP 120 (123)
T ss_dssp HHTTCCCBCSSSCEEEEEEEEBSSSSBCCCEEEEEECCSCCSSC
T ss_pred ccEEEEcCCCCCCEEEEEEEEecCCcCCCCCCcEEEEecCCCCC
Confidence 1122578999999999999886644 3567888999765543
|
| >d1ujta_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1568 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.90 E-value=0.12 Score=42.60 Aligned_cols=41 Identities=17% Similarity=0.088 Sum_probs=31.5
Q ss_pred EEEEEeCCCCCCCEEEEEEEeCCCC---CccceEEEEcCCCCCC
Q 008029 155 IHHVKIDGLDPGTKYYYKCGDSKIP---AMSAEHVFETLPLPSP 195 (580)
Q Consensus 155 ~h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~p~~~~ 195 (580)
..+.+|+||+|+|.|.+||..-+.. ..|+...++|++..++
T Consensus 74 ~~s~~i~~L~p~t~Y~f~V~A~n~~G~G~~S~~~~~~T~e~~~P 117 (120)
T d1ujta_ 74 ERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEESGP 117 (120)
T ss_dssp CCEEEEESCCSSEEEEEEEEEESSSCCCCCCCCEEEEECSSCCC
T ss_pred eeEEEECCCCCCCEEEEEEEEEeCCcCcCCCCCEEEEeCCCCcC
Confidence 3566789999999999999664432 4678889999886543
|
| >d1axib2 b.1.2.1 (B:131-236) Growth hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Growth hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.48 E-value=0.047 Score=43.96 Aligned_cols=35 Identities=11% Similarity=0.060 Sum_probs=25.5
Q ss_pred EEEEeCCCCCCCEEEEEEEeC--CC---CCccceEEEEcC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDS--KI---PAMSAEHVFETL 190 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~--~~---~~~S~~~~F~T~ 190 (580)
...+|++|+|+|.|.+||... +. +.||+....+|+
T Consensus 65 ~~~~i~~L~~~t~Y~frVRa~~~~~g~ws~wS~~v~v~~P 104 (106)
T d1axib2 65 TSVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTLP 104 (106)
T ss_dssp SEEEEEEEETTSCEEEEEEEEETTSSCCCCCCCCEEECCC
T ss_pred ceEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEECC
Confidence 467789999999999999652 22 356777666653
|
| >d1fnaa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.23 E-value=0.14 Score=39.45 Aligned_cols=22 Identities=27% Similarity=0.457 Sum_probs=18.7
Q ss_pred EEEEeCCCCCCCEEEEEEEeCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSK 177 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~ 177 (580)
..+.|+||+|+|.|.++|..-.
T Consensus 50 t~~~l~~L~p~t~Y~~~V~a~~ 71 (91)
T d1fnaa_ 50 STATISGLKPGVDYTITVYAVT 71 (91)
T ss_dssp CEEEECSCCTTCEEEEEEEEEC
T ss_pred cEEEeCCCCCCCEEEEEEEEEe
Confidence 4678999999999999997644
|
| >d2gysa4 b.1.2.1 (A:317-416) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.76 E-value=0.17 Score=39.63 Aligned_cols=72 Identities=14% Similarity=0.312 Sum_probs=36.7
Q ss_pred eEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccEEEEE
Q 008029 80 QIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGIIHHVK 159 (580)
Q Consensus 80 qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~h~v~ 159 (580)
.|.++-+ .+++.|+|.......+. ....=.|+|....+.-..... . .. .--..+.
T Consensus 10 ~l~v~~~-~~s~~l~W~~P~~~~~~-------~~~~Y~v~y~~~~~~~~~~~~-~-~~---------------~~~~~~~ 64 (100)
T d2gysa4 10 SLQVTKD-GDSYSLRWETMKMRYEH-------IDHTFEIQYRKDTATWKDSKT-E-TL---------------QNAHSMA 64 (100)
T ss_dssp EEEEC----CCCEEEEEC---------------CEEEEEEEECSSSCSTTSCE-E-EE---------------ESCSEEE
T ss_pred ccEEEEC-CCEEEEEEecCcccCCc-------cceEEEEEEeecccceeceee-c-cc---------------CCceEEE
Confidence 4555432 67899999875432111 011345777654433211100 0 00 0124678
Q ss_pred eCCCCCCCEEEEEEEeC
Q 008029 160 IDGLDPGTKYYYKCGDS 176 (580)
Q Consensus 160 l~gL~P~T~Y~Yrvg~~ 176 (580)
|.+|+|++.|.+||...
T Consensus 65 l~~L~p~t~Y~~rVRa~ 81 (100)
T d2gysa4 65 LPALEPSTRYWARVRVR 81 (100)
T ss_dssp CCCCCSSCCCEEEEEEE
T ss_pred eCCCCCCCeEEEEEEEE
Confidence 99999999999999653
|
| >d1wj3a_ b.1.2.1 (A:) Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Contactin 3 (KIAA1496) species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.35 E-value=0.81 Score=36.64 Aligned_cols=35 Identities=9% Similarity=-0.070 Sum_probs=23.8
Q ss_pred EeCCCCCCCEEEEEEEeCCC---CCccceEEEEcCCCC
Q 008029 159 KIDGLDPGTKYYYKCGDSKI---PAMSAEHVFETLPLP 193 (580)
Q Consensus 159 ~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~ 193 (580)
.+.+|+|+|.|.+||...+. ..+|+...+.+....
T Consensus 75 ~~~~L~p~t~Y~~~V~A~n~~G~G~~S~~v~v~~~~~~ 112 (117)
T d1wj3a_ 75 AELVLPIKEDYIIEVKATTDGGDGTSSEQIRIPRITSS 112 (117)
T ss_dssp EEEECCCSSCEEEEEEEEESSCCCCBCCCEEECCCCCC
T ss_pred EEeeccCCcEEEEEEEEEcCCccCCCCCCEEEeccCCC
Confidence 34589999999999976332 246776666554433
|
| >d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.12 E-value=0.17 Score=43.23 Aligned_cols=36 Identities=22% Similarity=0.221 Sum_probs=27.8
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCCC------CccceEEEEcCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKIP------AMSAEHVFETLP 191 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~~------~~S~~~~F~T~p 191 (580)
.+.+|+||+|+|.|.+||...+.. ..+....|||+|
T Consensus 155 ~~~~i~~L~p~t~Y~~~V~A~n~~~~~~~~s~s~~~~~rT~P 196 (196)
T d2dtge2 155 ESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTMP 196 (196)
T ss_dssp SEEEECSSCSSCEEEECCEEESCSSSSCCBCCCCCEEEECCC
T ss_pred EEEEECCCCCCCEEEEEEEEEECCCCCCCccCcceEEeeCCC
Confidence 467899999999999999764422 245678888886
|
| >d2cspa1 b.1.2.1 (A:8-124) Rim binding protein 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Rim binding protein 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.49 E-value=0.17 Score=41.13 Aligned_cols=92 Identities=15% Similarity=0.096 Sum_probs=50.8
Q ss_pred CCCceEEEEeCC-CCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCcccccccc
Q 008029 76 NFPEQIALAISS-PTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGI 154 (580)
Q Consensus 76 ~~P~qi~la~~~-~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 154 (580)
..|..|.+.... +++|.|+|.-.... +.+ ......++.|....+..... .. . ....-
T Consensus 12 ~pP~~v~v~~~~s~~si~vsW~PP~~~-~~~-----~~~~~~i~~Y~v~~~~~~~~-----~~-~----------~~~~~ 69 (117)
T d2cspa1 12 APPQDVTVQAGVTPATIRVSWRPPVLT-PTG-----LSNGANVTGYGVYAKGQRVA-----EV-I----------FPTAD 69 (117)
T ss_dssp CCCEEEEECCCSSTTEEEEEEECCCCC-TTS-----CSSSSCEEEEEEESSSSEEE-----EE-C----------CTTCS
T ss_pred CCCCccEEEEecCCCEEEEEEcCCCcc-ccC-----cccccceEEEEEEeecccce-----ee-e----------eeccc
Confidence 457888775544 78999999753211 000 01123466776543221110 00 0 01123
Q ss_pred EEEEEeCCCCCCCEEEEEEEeCCCC---CccceEEEEc
Q 008029 155 IHHVKIDGLDPGTKYYYKCGDSKIP---AMSAEHVFET 189 (580)
Q Consensus 155 ~h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T 189 (580)
...++|+||+|+|.|.+||...+.. ..|+...++|
T Consensus 70 ~~~~~i~~L~~~t~Y~v~V~A~n~~G~s~~S~~v~i~t 107 (117)
T d2cspa1 70 STAVELVRLRSLEAKGVTVRTLSAQGESVDSAVAAVPP 107 (117)
T ss_dssp EEEEESHHHHHHTCSCBEEEEEESSCCCCCCSCBCCCH
T ss_pred eeeeeccCCCCCcEEEEEEEEEcCCCcCCCCCCEEeeC
Confidence 4567899999999999999664432 3455555555
|
| >d1bqua1 b.1.2.1 (A:5-99) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor gp130 cytokine-binding domains species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.42 E-value=0.64 Score=35.80 Aligned_cols=76 Identities=7% Similarity=-0.052 Sum_probs=44.0
Q ss_pred CCCceEEEEeCCCCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCccccccccE
Q 008029 76 NFPEQIALAISSPTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGII 155 (580)
Q Consensus 76 ~~P~qi~la~~~~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~~ 155 (580)
..|..+.+.-.+.++|.++|.-+... |. + ..-.|+|........... .... .--
T Consensus 5 ~~P~n~~~~~~~~~si~~~W~p~~~~-~~------~--~~y~v~~~~~~~~~~~~~----------~~~~-------~~~ 58 (95)
T d1bqua1 5 EKPKNLSCIVNEGKKMRCEWDGGRET-HL------E--TNFTLKSEWATHKFADCK----------AKRD-------TPT 58 (95)
T ss_dssp CCCEEEEEEEETTSCCEEEEECCSCC-SS------C--CEEEEEEEETTEECCCEE----------CCSS-------CTT
T ss_pred CCCeeeEEEEccCCEEEEEEeCcccC-CC------c--eEEEEEEEEcccceeEee----------cccc-------cce
Confidence 46777877766688999999864321 11 1 234556554432211100 0011 111
Q ss_pred EEEEeCCCCCCCEEEEEEEeCC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSK 177 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~ 177 (580)
-...+.+|+|++.|++||...+
T Consensus 59 ~~~~~~~L~~~~~Y~f~V~A~N 80 (95)
T d1bqua1 59 SCTVDYSTVYFVNIEVWVEAEN 80 (95)
T ss_dssp EEECSSCCCTTSCEEEEEEEEE
T ss_pred eeeeeeecCCCcEEEEEEEEEe
Confidence 2345679999999999998765
|
| >d1fyhb1 b.1.2.1 (B:12-109) Interferon-gamma receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interferon-gamma receptor alpha chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.87 E-value=1.7 Score=33.24 Aligned_cols=27 Identities=11% Similarity=0.037 Sum_probs=20.4
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCCCCcc
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKIPAMS 182 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S 182 (580)
....+.+|.+++.|++||......+.|
T Consensus 57 ~~~~~~~l~~~~~Y~fRV~A~n~~g~S 83 (98)
T d1fyhb1 57 CNISDHVGDPSNSLWVRVKARVGQKES 83 (98)
T ss_dssp EECGGGCCSTTSCEEEEEEEEETTEEC
T ss_pred eeeEecccCCCCEEEEEEEEEcCCccc
Confidence 445678999999999999876544444
|
| >d2dtge1 b.1.2.1 (E:808-909) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.68 E-value=0.025 Score=45.26 Aligned_cols=34 Identities=18% Similarity=0.401 Sum_probs=24.7
Q ss_pred EEEEeCCCCCCCEEEEEEEeCCC---CCccceEEEEcC
Q 008029 156 HHVKIDGLDPGTKYYYKCGDSKI---PAMSAEHVFETL 190 (580)
Q Consensus 156 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~ 190 (580)
+...|.+|+|++ |.+||...+. +.+|+...|.|.
T Consensus 63 ~~~~~~~L~~~t-Y~~rV~A~n~~G~g~~S~~v~f~~~ 99 (102)
T d2dtge1 63 RGCRLRGLSPGN-YSVRIRATSLAGNGSWTEPTYFYVT 99 (102)
T ss_dssp TCCCCCSCCSSE-ECCCCCEEETTBCCCCCCCCEECCC
T ss_pred EEEEEeccceee-EEEEEEEEcCCccCCCCCCEEEEcc
Confidence 556789999975 9999865332 257788888773
|
| >d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Serine/threonine protein phosphatase 5, PP5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=83.70 E-value=0.67 Score=44.91 Aligned_cols=21 Identities=19% Similarity=0.308 Sum_probs=18.9
Q ss_pred HHHHHHHHHhcCCcEEEEccc
Q 008029 391 RQEMEALLYQYGVDIVFSGHV 411 (580)
Q Consensus 391 r~~l~~Ll~ky~VdlvlsGH~ 411 (580)
.+++..++++.++++++=||.
T Consensus 233 ~~~~~~Fl~~n~l~lIIR~He 253 (324)
T d1s95a_ 233 PDVTKAFLEENNLDYIIRSHE 253 (324)
T ss_dssp HHHHHHHHHHHTCCEEEECCS
T ss_pred HHHHHHHHHHcCCcEEEEcCc
Confidence 368889999999999999997
|
| >d3d85d3 b.1.2.1 (D:212-305) The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.19 E-value=0.79 Score=35.49 Aligned_cols=83 Identities=12% Similarity=-0.026 Sum_probs=41.0
Q ss_pred CCCceEEEEeCC-CCcEEEEEEeCCCCCCCCCCCCCCCCCCcEEEEcccCCCcceEEeeEEEEEeeecccCCcccccccc
Q 008029 76 NFPEQIALAISS-PTSMWVSWVSGDAQIGSNVTPLDPSTVASDVWYGKQSGKYTSKRGGNATVYSQLYPFKGLLNYTSGI 154 (580)
Q Consensus 76 ~~P~qi~la~~~-~~sm~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~p~~g~~~~~~~~ 154 (580)
..|+.|.+.... ++.+.|+|............ -...=.|+|....+.......-
T Consensus 3 dPP~nl~v~~~~~~~~l~v~W~~P~~~~~~~~~----~~L~Yev~y~~~~~~~~~~~~~--------------------- 57 (94)
T d3d85d3 3 DPPKNLQLKPLKNSRQVEVSWEYPDTWSTPHSY----FSLTFCVQVQGKSKREKKDRVF--------------------- 57 (94)
T ss_dssp CCCEEEEEEEC----CEEEEEECCTTSCSCTTT----SCEEEEEEEECC------CEEE---------------------
T ss_pred CCCcccEEEEecCCCeEEEEecCCCCcCCCCCe----EEEEEEEEEEECCCCccEEecc---------------------
Confidence 358899988765 77899999875432110000 0012356776544332221100
Q ss_pred EEEEEeCCCCCCCEEEEEEEeCCC---CCccce
Q 008029 155 IHHVKIDGLDPGTKYYYKCGDSKI---PAMSAE 184 (580)
Q Consensus 155 ~h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~ 184 (580)
...++..|.|++.|.+||..... +.||++
T Consensus 58 -~~~t~~~L~p~~~Y~v~VRa~~~~~~g~WSeW 89 (94)
T d3d85d3 58 -TDKTSATVICRKNASISVRAQDRYYSSSWSEW 89 (94)
T ss_dssp -ESSSEEEECCCSSCEEEEEEEESSSCCCCCCC
T ss_pred -ccceEEEecCCCCEEEEEEEecCCCCCCCccC
Confidence 00012358899999999976421 245554
|
| >d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-1 (PP-1) species: Human (Homo sapiens), beta isoform [TaxId: 9606]
Probab=81.67 E-value=0.73 Score=44.03 Aligned_cols=23 Identities=13% Similarity=0.264 Sum_probs=19.8
Q ss_pred HHHHHHHHHhcCCcEEEEccccC
Q 008029 391 RQEMEALLYQYGVDIVFSGHVHA 413 (580)
Q Consensus 391 r~~l~~Ll~ky~VdlvlsGH~H~ 413 (580)
.++++..+++++.++++=||.-.
T Consensus 224 ~~~~~~Fl~~n~l~~IIR~He~~ 246 (294)
T d1jk7a_ 224 AEVVAKFLHKHDLDLICRAHQVV 246 (294)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCC
T ss_pred HHHHHHHHHHCCCCEEEEcCccc
Confidence 46788999999999999999743
|
| >d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.43 E-value=0.78 Score=43.69 Aligned_cols=22 Identities=18% Similarity=0.190 Sum_probs=18.8
Q ss_pred HHHHHHHHHhcCCcEEEEcccc
Q 008029 391 RQEMEALLYQYGVDIVFSGHVH 412 (580)
Q Consensus 391 r~~l~~Ll~ky~VdlvlsGH~H 412 (580)
.+++++.++++++++++=||.=
T Consensus 217 ~~~~~~Fl~~n~l~~IIR~He~ 238 (288)
T d3c5wc1 217 QDISETFNHANGLTLVSRAHQL 238 (288)
T ss_dssp HHHHHHHHHHTTCSEEEECCSC
T ss_pred HHHHHHHHHHCCCcEEEcCCCc
Confidence 3578889999999999999873
|
| >d2dtge3 b.1.2.1 (E:468-592) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.62 E-value=0.27 Score=40.02 Aligned_cols=36 Identities=22% Similarity=0.023 Sum_probs=26.6
Q ss_pred cEEEEEeCCCCCCCEEEEEEEeCCCC--------CccceEEEEc
Q 008029 154 IIHHVKIDGLDPGTKYYYKCGDSKIP--------AMSAEHVFET 189 (580)
Q Consensus 154 ~~h~v~l~gL~P~T~Y~Yrvg~~~~~--------~~S~~~~F~T 189 (580)
.....+|+||+|+|+|.++|..-+.. ..|+...|+|
T Consensus 80 ~~~~~~l~~L~p~T~Y~~~V~A~n~~G~~~~~~g~~S~~v~~~T 123 (125)
T d2dtge3 80 NHPGWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQT 123 (125)
T ss_dssp SCCEEEECSCCSSCBCCBEEEECCCCCSSCCCCCCBCCCBCCBC
T ss_pred ccCEEEECCCccCCEEEEEEEEEeCCCccCCCCCCCcccEEEEc
Confidence 34567899999999999999765422 3566666666
|