Citrus Sinensis ID: 008093
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 578 | 2.2.26 [Sep-21-2011] | |||||||
| Q40863 | 457 | Embryogenesis-associated | N/A | no | 0.574 | 0.726 | 0.346 | 3e-51 | |
| Q8WU67 | 409 | Abhydrolase domain-contai | yes | no | 0.532 | 0.753 | 0.334 | 1e-47 | |
| Q91ZH7 | 411 | Abhydrolase domain-contai | yes | no | 0.532 | 0.749 | 0.331 | 3e-47 | |
| Q0VC00 | 411 | Abhydrolase domain-contai | yes | no | 0.536 | 0.754 | 0.327 | 5e-47 | |
| Q3T0A0 | 404 | Abhydrolase domain-contai | no | no | 0.534 | 0.764 | 0.298 | 2e-40 | |
| Q96SE0 | 405 | Abhydrolase domain-contai | no | no | 0.574 | 0.819 | 0.272 | 1e-39 | |
| Q18610 | 375 | Putative esterase C44C1.5 | no | no | 0.600 | 0.925 | 0.288 | 3e-38 | |
| Q5RK23 | 412 | Abhydrolase domain-contai | no | no | 0.586 | 0.822 | 0.280 | 5e-36 | |
| Q9QZC8 | 412 | Abhydrolase domain-contai | no | no | 0.536 | 0.752 | 0.279 | 2e-35 | |
| Q02891 | 456 | Medium-chain fatty acid e | yes | no | 0.546 | 0.692 | 0.279 | 4e-31 |
| >sp|Q40863|EMB8_PICGL Embryogenesis-associated protein EMB8 OS=Picea glauca GN=EMB8 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 203 bits (517), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 123/355 (34%), Positives = 196/355 (55%), Gaps = 23/355 (6%)
Query: 82 VVSKCKIVHGRYLVTPWLSSPHIQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDWLMGS 141
++SK + Y P++ + H++T F FF P RR+ R+ DGG + LDW +
Sbjct: 77 LMSKLTTLGRPYRHFPFMGNRHVETIFASFFRSWPVIKSRRECLRMEDGGTVELDWPLEG 136
Query: 142 TGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLG 201
D N + + +P+ I++PGLT S SY++H++ K GW+ VV N RG
Sbjct: 137 E---DAELWNGELPVN--SPVLILLPGLTGGSDDSYVKHMLLRARKHGWHSVVFNSRGCA 191
Query: 202 GVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVA 261
+T+ FY+A +T+D +V+ ++ + ++ ++A+G S+GANILV+YLGE P++
Sbjct: 192 DSPVTTPQFYSASFTKDLCQVVKHVAVRFSESNIYAVGWSLGANILVRYLGEVAGNCPLS 251
Query: 262 GAAAICSPWDLLIGDRFIGRRL-IQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIK--- 317
GA ++C+P++L+I D + L +YD+AL GL+ P+++RL +EGI+
Sbjct: 252 GAVSLCNPFNLVIADEDFHKGLGFNNVYDKALARGLRQIF----PKHTRL--FEGIEGEY 305
Query: 318 ------KSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCT 371
K+RS+RDFD T + F++V YY N SSS + V LLCI + +DP+
Sbjct: 306 NIPTVAKARSVRDFDGGLTRVSFGFQSVGDYYSNSSSSLSIKYVQTSLLCIQASNDPIAP 365
Query: 372 VEAIPWDECRANKNVVLATTWHGGHLAFFEGLTA--AGMWWVRAVNEYLGVLHSS 424
IPW++ + N N +L T +GGHL + G A W V EYL VL +
Sbjct: 366 SRGIPWEDIKENPNCLLVVTPNGGHLGWVAGDDAPFGAPWTDPLVMEYLEVLEKN 420
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Picea glauca (taxid: 3330) EC: 3EC: .EC: 1EC: .EC: 1EC: .EC: - |
| >sp|Q8WU67|ABHD3_HUMAN Abhydrolase domain-containing protein 3 OS=Homo sapiens GN=ABHD3 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 107/320 (33%), Positives = 164/320 (51%), Gaps = 12/320 (3%)
Query: 86 CKIVHGRYLVTPWLSSPHIQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDWLMGSTGPG 145
C +V Y T W QT F P YR +L + +DGG I+LDW
Sbjct: 73 CPVVTETYYPTVWCWEGRGQTLLRPFITSKPPVQYRNELIKTADGGQISLDW-------- 124
Query: 146 DVFHANNFISKDD--TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGV 203
F +N D T P +++PGLT S SYI H++ + + G+ VV N+RG+ G
Sbjct: 125 --FDNDNSTCYMDASTRPTILLLPGLTGTSKESYILHMIHLSEELGYRCVVFNNRGVAGE 182
Query: 204 SITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGA 263
++ + Y TED VI ++H YP AP A G S+G +L+ YLG+ G KTP+ A
Sbjct: 183 NLLTPRTYCCANTEDLETVIHHVHSLYPSAPFLAAGVSMGGMLLLNYLGKIGSKTPLMAA 242
Query: 264 AAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIR 323
A W+ + + L +++ LT LQ H + + + + + K++SIR
Sbjct: 243 ATFSVGWNTFACSESLEKPLNWLLFNYYLTTCLQSSVNKHRHMFVKQVDMDHVMKAKSIR 302
Query: 324 DFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRAN 383
+FD T ++ ++T+D YY + S S + +V IP+LC++S+DD AIP + + N
Sbjct: 303 EFDKRFTSVMFGYQTIDDYYTDASPSPRLKSVGIPVLCLNSVDDVFSPSHAIPIETAKQN 362
Query: 384 KNVVLATTWHGGHLAFFEGL 403
NV L T +GGH+ F EG+
Sbjct: 363 PNVALVLTSYGGHIGFLEGI 382
|
Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q91ZH7|ABHD3_MOUSE Abhydrolase domain-containing protein 3 OS=Mus musculus GN=Abhd3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 190 bits (482), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 106/320 (33%), Positives = 162/320 (50%), Gaps = 12/320 (3%)
Query: 86 CKIVHGRYLVTPWLSSPHIQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDWLMGSTGPG 145
C +V Y T W QT F P YR +L + +DGG I+LDW
Sbjct: 73 CPVVTETYYPTVWCWESRGQTLLRPFITSKPPVQYRNELIKTADGGQISLDW-------- 124
Query: 146 DVFHANN--FISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGV 203
F NN + T P +++PGLT S SYI H++ + + G+ VV N+RG+ G
Sbjct: 125 --FDNNNSAYYVDASTRPTILLLPGLTGTSKESYILHMIHLSEELGYRCVVFNNRGVAGE 182
Query: 204 SITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGA 263
S+ + Y TED V+ ++H YP AP A G S+G +L+ YLG+ G KTP+ A
Sbjct: 183 SLLTPRTYCCANTEDLEAVVHHVHSLYPGAPFLAAGVSMGGMLLLNYLGKIGSKTPLMAA 242
Query: 264 AAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIR 323
A W+ + R L +++ LT LQ + H + + + + K++SIR
Sbjct: 243 ATFSVGWNTFACSESLERPLNWLLFNYYLTTCLQSSVKKHRHMFVEQIDMDQVMKAKSIR 302
Query: 324 DFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRAN 383
+FD T ++ + T+D YY + S + + +V IP+LC+++ DD AIP + + N
Sbjct: 303 EFDKRFTAVMFGYRTLDDYYTDASPNRRLKSVGIPVLCLNATDDVFSPSHAIPIETAKQN 362
Query: 384 KNVVLATTWHGGHLAFFEGL 403
NV L T +GGH+ F EG+
Sbjct: 363 PNVALVLTAYGGHIGFLEGI 382
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Mus musculus (taxid: 10090) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q0VC00|ABHD3_BOVIN Abhydrolase domain-containing protein 3 OS=Bos taurus GN=ABHD3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 189 bits (480), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 165/318 (51%), Gaps = 8/318 (2%)
Query: 86 CKIVHGRYLVTPWLSSPHIQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDWLMGSTGPG 145
C +V Y T W QT F P YR +L + +DGG I+LDW
Sbjct: 73 CPVVTETYYPTVWCWESRGQTLLRPFITSKPLVQYRNELIKTADGGQISLDWF------- 125
Query: 146 DVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSI 205
D ++ +++ T P +++PGLT S SYI H++ + + G+ VV N+RG+ G ++
Sbjct: 126 DNDNSKHYMDAS-TRPTVLLLPGLTGTSKESYILHMIHLSEELGYRYVVFNNRGVAGENL 184
Query: 206 TSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAA 265
+ Y TED VI ++H YP AP A G S+G +L+ YLG+ G KTP+ AA
Sbjct: 185 LTPRTYCCSNTEDLETVIHHVHSLYPSAPFLAAGVSMGGMLLLNYLGKIGPKTPLKAAAT 244
Query: 266 ICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDF 325
W+ + + L +++ LT LQ H + + + + + K++SIR+F
Sbjct: 245 FSVGWNTFACSESLEKPLNWLLFNYYLTTCLQSSVNKHRHMFVKQIDVDHVMKAKSIREF 304
Query: 326 DSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKN 385
D T ++ + T+D YY + S + + +V IP+LC++S+DD AIP + + N N
Sbjct: 305 DKRFTSVMFGYRTIDDYYTDASPNRRLKSVGIPVLCLNSVDDVFSPSHAIPIETAKQNPN 364
Query: 386 VVLATTWHGGHLAFFEGL 403
V L T +GGH+ F EG+
Sbjct: 365 VALVLTSYGGHIGFLEGI 382
|
Bos taurus (taxid: 9913) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q3T0A0|ABHD1_BOVIN Abhydrolase domain-containing protein 1 OS=Bos taurus GN=ABHD1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 150/318 (47%), Gaps = 9/318 (2%)
Query: 86 CKIVHGRYLVTPWLSSPHIQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDWLMGSTGPG 145
C + + T W +QT F P Y ++ DGG I LDW S
Sbjct: 56 CPVTLETFYPTLWCFEGRLQTIFRVLLQSRPVVPYSSEVLETPDGGQILLDWASQS---- 111
Query: 146 DVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSI 205
N+ T P +++PG+T S +YI HLV K G+ VV N+RG G +
Sbjct: 112 -----NSQYPDPSTQPTVLLLPGITGSSQETYILHLVDQALKDGYRAVVFNNRGCRGEEL 166
Query: 206 TSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAA 265
+ + A TED VI ++ YP+APL A+G S+G +++ +L G + A
Sbjct: 167 LTHRAFCASNTEDLVTVINHIKSRYPQAPLLAVGISLGGILVLNHLARTGRAAGLVAALT 226
Query: 266 ICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDF 325
+ + WD R + L +++ LT GL + + N + + ++R+IR+F
Sbjct: 227 LSACWDSFETTRSLETPLNSLLFNHRLTAGLCQVVNRNRKVMDNVVNVDFVLQARTIREF 286
Query: 326 DSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKN 385
D T +V ++ YY+ S T V + IP+LC+++ DDP V+A+P + + +
Sbjct: 287 DERYTAVVFGYQDCTAYYQAASPRTKVNAIQIPVLCLNAADDPFSPVDALPLQAAQHSLH 346
Query: 386 VVLATTWHGGHLAFFEGL 403
V L T GGH+ F EGL
Sbjct: 347 VALLVTARGGHIGFLEGL 364
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Bos taurus (taxid: 9913) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q96SE0|ABHD1_HUMAN Abhydrolase domain-containing protein 1 OS=Homo sapiens GN=ABHD1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 160/341 (46%), Gaps = 9/341 (2%)
Query: 86 CKIVHGRYLVTPWLSSPHIQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDWLMGSTGPG 145
C I + T W +Q+ F P Y+ + + DGG + LDW
Sbjct: 56 CSITTETFYPTLWCFEGRLQSIFQVLLQSQPLVLYQSDILQTPDGGQLLLDWAKQPDSSQ 115
Query: 146 DVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSI 205
D T PI +++PG+T S +Y+ HLV + G+ VV N+RG G +
Sbjct: 116 D--------PDPTTQPIVLLLPGITGSSQDTYVLHLVNQALRDGYQAVVFNNRGCRGEEL 167
Query: 206 TSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAA 265
+ + A TED V+ ++ H YP+APL A+G S G +++ +L + + + A
Sbjct: 168 RTHRAFCASNTEDLETVVNHIKHRYPQAPLLAVGISFGGILVLNHLAQARQAAGLVAALT 227
Query: 266 ICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDF 325
+ + WD R + L ++++ LT GL + + ++ + + + ++R+IR F
Sbjct: 228 LSACWDSFETTRSLETPLNSLLFNQPLTAGLCQLVERNRKVIEKVVDIDFVLQARTIRQF 287
Query: 326 DSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKN 385
D T + ++ TYY+ S T + + IP+L +S+ DDP V A+P + +
Sbjct: 288 DERYTSVAFGYQDCVTYYKAASPRTKIDAIRIPVLYLSAADDPFSPVCALPIQAAQHSPY 347
Query: 386 VVLATTWHGGHLAFFEGLTAAGMWWV-RAVNEYLGVLHSSP 425
V L T GGH+ F EGL W++ R +++Y + P
Sbjct: 348 VALLITARGGHIGFLEGLLPWQHWYMSRLLHQYAKAIFQDP 388
|
Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q18610|YYC5_CAEEL Putative esterase C44C1.5 OS=Caenorhabditis elegans GN=C44C1.5 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 106/367 (28%), Positives = 164/367 (44%), Gaps = 20/367 (5%)
Query: 36 VLALSLLFVIVIYNFLEFHFVEDLFSGFRGSPVRLTFNSSSPIYDGVVSKCKIVHGRYLV 95
VL L L VIV FL ++S + + + + + V S +I+ +Y
Sbjct: 2 VLPLILTLVIVAPIFLW------MYSWYISAIPKHYVKPGTKLQKKVHSNLRILEQKYHP 55
Query: 96 TPWLSSPHIQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFIS 155
+ W QT F P + R++ DGG +DWL+
Sbjct: 56 SWWCPFGTTQTVVRQIFRDCPSLPFTREIVEFDDGGAAGIDWLIPE-------------G 102
Query: 156 KDDTTPIAIVIPGLT-SDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAG 214
DDTTPI + +PG+T S +SY+ H V +GW VV N RGLGGV + + YNA
Sbjct: 103 ADDTTPIVVFLPGITGSTHDSSYVLHPVKEARDKGWKCVVVNPRGLGGVKLRTTRTYNAA 162
Query: 215 WTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLI 274
D + ++ YP A G S+G IL YL GE + G + SPWD L+
Sbjct: 163 TPHDFAFIAKMINERYPDAKKLGCGFSMGGMILWNYLAMTGENADLDGGMIVSSPWDPLV 222
Query: 275 GDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVG 334
I + Q I++ + L D + + + + +++ + + ++R FD +
Sbjct: 223 ASDSIECFIPQLIFNSFIAKNLVDMVRPYRELFKDMVDFDEVCRCNTVRGFDRSFVIPMY 282
Query: 335 KFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHG 394
F++ D YYR + +T V + IP + ++S+DD VE IP + + V T HG
Sbjct: 283 GFKSCDDYYRQATLATKVDKIKIPCVTLNSVDDYFSPVECIPTLDIMESDYVCGIITNHG 342
Query: 395 GHLAFFE 401
GH AF E
Sbjct: 343 GHTAFME 349
|
Caenorhabditis elegans (taxid: 6239) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q5RK23|ABHD1_RAT Abhydrolase domain-containing protein 1 OS=Rattus norvegicus GN=Abhd1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 152 bits (385), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 156/353 (44%), Gaps = 14/353 (3%)
Query: 86 CKIVHGRYLVTPWLSSPHIQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDWLMGSTGPG 145
C + + T W +QT F P YR ++ + DGG LDW + P
Sbjct: 64 CPVTVETFYPTLWCFEGRLQTIFRVLLQSQPVIPYRSEVLQTPDGGQFLLDW---AEQP- 119
Query: 146 DVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSI 205
++ T PI +++PG++ S YI HLV K G+ VV N+RG G +
Sbjct: 120 ----YSSHCPDPTTQPIVLLLPGISGSSQEPYILHLVDQALKDGYRAVVFNNRGCRGEEL 175
Query: 206 TSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAA 265
+ Y A TED V+ ++ H Y +APL A+G S G +++ YL G+ +
Sbjct: 176 LTHRAYCASNTEDLETVVKHIKHRYSRAPLLAVGISFGGILVLNYLARTGKAGGLVAGLT 235
Query: 266 ICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDF 325
+ + WD + L ++++ LT GL + ++ + + K+R+IR
Sbjct: 236 MSACWDSFETVDSLETPLNSLLFNQPLTAGLCRLVARNRKSIEKVLDVDFAIKARTIRQL 295
Query: 326 DSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKN 385
D T + ++ YY S T V + P+LC+++ DDP V+A+P + +
Sbjct: 296 DERYTSVAFGYKDCAAYYHASSPRTKVDAICTPVLCLNAADDPFSPVQALPLQAAQKSPY 355
Query: 386 VVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSSPYMHVRKKVQEPGL 438
V L T GGH+ F EGL W +N VLH + V PGL
Sbjct: 356 VALLITARGGHIGFLEGLLP---WQHCYMNR---VLHQYARAVFQHSVGLPGL 402
|
Rattus norvegicus (taxid: 10116) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q9QZC8|ABHD1_MOUSE Abhydrolase domain-containing protein 1 OS=Mus musculus GN=Abhd1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 144/318 (45%), Gaps = 8/318 (2%)
Query: 86 CKIVHGRYLVTPWLSSPHIQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDWLMGSTGPG 145
C + + T W +QT F P YR ++ + DGG LDW + P
Sbjct: 64 CPVTVETFYPTLWCFEGRLQTIFRVLLQSQPVVPYRSEVLQTPDGGQFLLDW---AEQPN 120
Query: 146 DVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSI 205
+ + T PI +++PG++ S YI HLV K G+ VV N+RG G +
Sbjct: 121 STHYPD-----PTTQPIVLLLPGISGSSQEPYILHLVNQALKDGYRAVVFNNRGCRGEEL 175
Query: 206 TSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAA 265
+ Y A TED V+ ++ Y +APL A+G S G +++ YL + G+ +
Sbjct: 176 LTHRAYCASNTEDLETVVKHIKRRYSQAPLLAVGISFGGILVLNYLAQTGKAGGLVAGLT 235
Query: 266 ICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDF 325
+ + WD + L ++++ LT GL + ++ + + K+R+IR
Sbjct: 236 MSACWDSFETVDSLETPLNSLLFNQPLTAGLCRLVARNRKPIEKVLDVDFAIKARTIRQL 295
Query: 326 DSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKN 385
D T + ++ YY+ S T V + P+LC+++ DDP V A P + +
Sbjct: 296 DERYTSVAFGYKDCAAYYQAASPRTKVDAIHTPVLCLNAADDPFSPVHAFPLQAAQKSPY 355
Query: 386 VVLATTWHGGHLAFFEGL 403
V L T GGH+ F EGL
Sbjct: 356 VALLITARGGHIGFLEGL 373
|
Mus musculus (taxid: 10090) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q02891|MCFS1_YEAST Medium-chain fatty acid ethyl ester synthase/esterase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=EEB1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 136 bits (343), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 164/390 (42%), Gaps = 74/390 (18%)
Query: 93 YLVTPWLSSPHIQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDWLMGS-------TGPG 145
YL T +LS+ F F+GR ++ + SDGG+ DW+M
Sbjct: 71 YLQTLYLSAGDFSKKFQVFYGR--------EIIKFSDGGVCTADWVMPEWEQTYSLNAEK 122
Query: 146 DVFHANNFISKDDTT------------------------------PIAIVIPGLTSDSAA 175
F+ F + + T P+ +V+ GL S
Sbjct: 123 ASFNEKQFSNDEKATHPKGWPRLHPRTRYLSSEELEKCHSKGYSYPLVVVLHGLAGGSHE 182
Query: 176 SYIRHLVFNTAKRG---WNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPK 232
IR L + +K G + VVV N RG +T+ + A T D RE + + +P+
Sbjct: 183 PLIRALSEDLSKVGDGKFQVVVLNARGCSRSKVTTRRIFTALHTGDVREFLNHQKALFPQ 242
Query: 233 APLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL-IGDRFIGRRLIQKIYDRA 291
++A+GTS GA +L YLGEEG+ P+ A A+ +PWD + D+ I+ R
Sbjct: 243 RKIYAVGTSFGAAMLTNYLGEEGDNCPLNAAVALSNPWDFVHTWDKLAHDWWSNHIFSRT 302
Query: 292 LTIGL--------------QDYAQLHEP--------RYSRLANWEGIKKSRSIRDFDSHA 329
LT L +++ H+P Y+R N E +K I +FD+
Sbjct: 303 LTQFLTRTVKVNMNELQVPENFEVSHKPTVEKPVFYTYTR-ENLEKAEKFTDILEFDNLF 361
Query: 330 TCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLA 389
T TYYR SS + N+ IP L I++ DDPV IP+ + R N V+L
Sbjct: 362 TAPSMGLPDGLTYYRKASSINRLPNIKIPTLIINATDDPVTGENVIPYKQARENPCVLLC 421
Query: 390 TTWHGGHLAFFEGLTAAGMWWVRAVNEYLG 419
T GGHLA+ + + W + E+LG
Sbjct: 422 ETDLGGHLAYLD--NESNSWLTKQAAEFLG 449
|
Displays enzymatic activity both for medium-chain fatty acid (MCFA) ethyl ester synthesis and hydrolysis (esterase activity). MCFA are toxic for yeast and this enzyme could thus be involved in their detoxification by esterification. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 578 | ||||||
| 225463932 | 571 | PREDICTED: embryogenesis-associated prot | 0.949 | 0.961 | 0.674 | 0.0 | |
| 297735816 | 538 | unnamed protein product [Vitis vinifera] | 0.908 | 0.975 | 0.663 | 0.0 | |
| 356535693 | 578 | PREDICTED: embryogenesis-associated prot | 0.975 | 0.975 | 0.616 | 0.0 | |
| 356535695 | 579 | PREDICTED: embryogenesis-associated prot | 0.975 | 0.974 | 0.618 | 0.0 | |
| 225448142 | 568 | PREDICTED: embryogenesis-associated prot | 0.963 | 0.980 | 0.630 | 0.0 | |
| 356576171 | 574 | PREDICTED: embryogenesis-associated prot | 0.958 | 0.965 | 0.614 | 0.0 | |
| 297739535 | 545 | unnamed protein product [Vitis vinifera] | 0.929 | 0.985 | 0.630 | 0.0 | |
| 357443437 | 575 | Embryogenesis-associated protein EMB8 [M | 0.934 | 0.939 | 0.602 | 0.0 | |
| 224108972 | 545 | predicted protein [Populus trichocarpa] | 0.930 | 0.987 | 0.602 | 0.0 | |
| 42562518 | 530 | alpha/beta-hydrolase domain-containing p | 0.901 | 0.983 | 0.598 | 0.0 |
| >gi|225463932|ref|XP_002266169.1| PREDICTED: embryogenesis-associated protein EMB8-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 808 bits (2088), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/568 (67%), Positives = 451/568 (79%), Gaps = 19/568 (3%)
Query: 20 YALLFNALRLIPISHYVLALSLLFVIVIYNFLEFHFVEDLFSGFRGSPVRLTFNSSSPIY 79
Y LLF AL IPISHY LA +I +Y+FLEFHF+ED+FSG RGSPV LTFNS S IY
Sbjct: 14 YKLLFRALSSIPISHYFLASLFCSLIFLYHFLEFHFLEDVFSGLRGSPVSLTFNSHSQIY 73
Query: 80 DGVVSKCKIVHGRYLVTPWLSSPHIQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDWLM 139
+GVVSKCKI+HGRYL TPWLSSPH QTAFL+FFGRPP +YRRQ+F SDGG +ALDWL+
Sbjct: 74 EGVVSKCKILHGRYLATPWLSSPHFQTAFLNFFGRPPVVNYRRQIFHASDGGSLALDWLL 133
Query: 140 GSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRG 199
S FHANN ISKDDTTPI +VIPGLTSDS ++YI+H N KRGWN+VVSNHRG
Sbjct: 134 PSDVLRGAFHANNAISKDDTTPIVVVIPGLTSDSTSAYIKHFALNMVKRGWNIVVSNHRG 193
Query: 200 LGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTP 259
LGG+SITSDCFYNAGWTED REVI +LHHEYP APLFA+GTSIGANILVKYLGE+GE P
Sbjct: 194 LGGISITSDCFYNAGWTEDIREVIAHLHHEYPVAPLFAVGTSIGANILVKYLGEDGENIP 253
Query: 260 VAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKS 319
VAGA AIC+PWDLLIGDRFI RRL+QK YD AL GLQ YAQLH+PRYSRLA+WEGIKKS
Sbjct: 254 VAGAVAICNPWDLLIGDRFISRRLLQKFYDMALASGLQGYAQLHQPRYSRLADWEGIKKS 313
Query: 320 RSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDE 379
RSIRDFD++ATCLVGKFET DTYYR CSS+++VGNV++PLLC+S+LDDPVCT EAIPWDE
Sbjct: 314 RSIRDFDTYATCLVGKFETADTYYRRCSSASFVGNVAVPLLCVSALDDPVCTREAIPWDE 373
Query: 380 CRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSSPYMHVRKKVQEPGLH 439
CRANKNV+LAT HGGHLAFFEG+ A +WWVRAV+E+L VLHSSP+MH +KK+ H
Sbjct: 374 CRANKNVILATPQHGGHLAFFEGIAATSLWWVRAVDEFLSVLHSSPFMHKQKKILNSSPH 433
Query: 440 LSTESSIDQGPYLNVSEDGMVAAVGNEQTRNSIVG---------DHQTNSEMVLDTEQDE 490
S ES+IDQGPY+N +EDGMVAA+GNEQT +++VG D +++EM D+EQDE
Sbjct: 434 SSLESAIDQGPYVNFAEDGMVAAMGNEQT-STVVGPLSEGQNIHDKSSDNEMASDSEQDE 492
Query: 491 QLTGAKSDAVPNTDRTCEPPANTPDTELRNLTASVTSCWNQLSQRNKRSMWLLAYVAIIT 550
++T S PN +T ++L +S+ C +LSQ N+ SMWL+AY+AI T
Sbjct: 493 RMTTENSALAPNIAQT---------SKLAAKPSSIRKCLEKLSQHNRISMWLMAYIAITT 543
Query: 551 TWPLVGSALRFIFGKKRKNVLSATLTKR 578
+WPLVG AL+F+F K K+VL A L R
Sbjct: 544 SWPLVGPALQFVFKNKFKSVLPAALHGR 571
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297735816|emb|CBI18536.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 777 bits (2007), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/559 (66%), Positives = 432/559 (77%), Gaps = 34/559 (6%)
Query: 20 YALLFNALRLIPISHYVLALSLLFVIVIYNFLEFHFVEDLFSGFRGSPVRLTFNSSSPIY 79
Y LLF AL IPISHY LA +I +Y+FLEFHF+ED+FSG RGSPV LTFNS S IY
Sbjct: 14 YKLLFRALSSIPISHYFLASLFCSLIFLYHFLEFHFLEDVFSGLRGSPVSLTFNSHSQIY 73
Query: 80 DGVVSKCKIVHGRYLVTPWLSSPHIQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDWLM 139
+GVVSKCKI+HGRYL TPWLSSPH QTAFL+FFGRPP +YRRQ+F SDGG +ALDWL+
Sbjct: 74 EGVVSKCKILHGRYLATPWLSSPHFQTAFLNFFGRPPVVNYRRQIFHASDGGSLALDWLL 133
Query: 140 GSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRG 199
S FHANN ISKDDTTPI +VIPGLTSDS ++YI+H N KRGWN+VVSNHRG
Sbjct: 134 PSDVLRGAFHANNAISKDDTTPIVVVIPGLTSDSTSAYIKHFALNMVKRGWNIVVSNHRG 193
Query: 200 LGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTP 259
LGG+SITSDCFYNAGWTED REVI +LHHEYP APLFA+GTSIGANILVKYLGE+GE P
Sbjct: 194 LGGISITSDCFYNAGWTEDIREVIAHLHHEYPVAPLFAVGTSIGANILVKYLGEDGENIP 253
Query: 260 VAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKS 319
VAGA AIC+PWDLLIGDRFI RRL+QK YD AL GLQ YAQLH+PRYSRLA+WEGIKKS
Sbjct: 254 VAGAVAICNPWDLLIGDRFISRRLLQKFYDMALASGLQGYAQLHQPRYSRLADWEGIKKS 313
Query: 320 RSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDE 379
RSIRDFD++ATCLVGKFET DTYYR CSS+++VGNV++PLLC+S+LDDPVCT EAIPWDE
Sbjct: 314 RSIRDFDTYATCLVGKFETADTYYRRCSSASFVGNVAVPLLCVSALDDPVCTREAIPWDE 373
Query: 380 CRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSSPYMHVRKKVQEPGLH 439
CRANKNV+LAT HGGHLAFFEG+ A +WWVRAV+E+L VLHSSP+MH +KK+ H
Sbjct: 374 CRANKNVILATPQHGGHLAFFEGIAATSLWWVRAVDEFLSVLHSSPFMHKQKKILNSSPH 433
Query: 440 LSTESSIDQGPYLNVSEDGMVAAVGNEQTRNSIVGDHQTNSEMVLDTEQDEQLTGAKSDA 499
S ES+IDQGPY+N +EDGMVAA+GNEQT + G S+
Sbjct: 434 SSLESAIDQGPYVNFAEDGMVAAMGNEQT---------------------STVVGPLSEG 472
Query: 500 VPNTDRTCEPPANTPDTELRNLTASVTSCWNQLSQRNKRSMWLLAYVAIITTWPLVGSAL 559
D++ +P +S+ C +LSQ N+ SMWL+AY+AI T+WPLVG AL
Sbjct: 473 QNIHDKSTKP-------------SSIRKCLEKLSQHNRISMWLMAYIAITTSWPLVGPAL 519
Query: 560 RFIFGKKRKNVLSATLTKR 578
+F+F K K+VL A L R
Sbjct: 520 QFVFKNKFKSVLPAALHGR 538
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356535693|ref|XP_003536378.1| PREDICTED: embryogenesis-associated protein EMB8-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 733 bits (1893), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/581 (61%), Positives = 442/581 (76%), Gaps = 17/581 (2%)
Query: 7 SSSSSSSSLNGDAYALLFNALRLIPISHYVLALSLLFVIVIYNFLEFHFVEDLFSGFRGS 66
S SS++++ G+ Y LLF AL LIPISHY+L S +F+ +Y FLE HF++DLFS F GS
Sbjct: 6 SCSSTTTTTTGNPYCLLFQALSLIPISHYLLFSSFVFLSFLYRFLELHFLQDLFSLFSGS 65
Query: 67 PVRLTFNSSSPIYDGVVSKCKIVHGRYLVTPWLSSPHIQTAFLHFFGRPPCFSYRRQLFR 126
V LT++ +S YD VVSKC+I+HG YL TPWLSSPH+QT FL+FFGRPP F YRRQLF
Sbjct: 66 SVTLTYHPASQFYDAVVSKCRILHGTYLATPWLSSPHLQTVFLNFFGRPPFFKYRRQLFT 125
Query: 127 LSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTA 186
DGG +ALDWL+ S H + +S D++TPI +VIPGLTSDS+++Y++HL ++TA
Sbjct: 126 TPDGGTVALDWLLSSDVSAGAIHMEDVVSTDESTPIVVVIPGLTSDSSSAYLKHLAYHTA 185
Query: 187 KRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANI 246
K GW VVVSNHRGLGGVSITSDCFYNAGWTED R V+ YLH E P+APLF +GTSIGANI
Sbjct: 186 KCGWKVVVSNHRGLGGVSITSDCFYNAGWTEDVRTVVNYLHKENPRAPLFVVGTSIGANI 245
Query: 247 LVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPR 306
L+KYLGE+GE PVAGA A+CSPWDLLIGDRFI RR +QK YD+AL IGLQ YA+LH+P
Sbjct: 246 LIKYLGEDGENIPVAGAVAVCSPWDLLIGDRFITRRHVQKFYDKALAIGLQGYAKLHQPH 305
Query: 307 YSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLD 366
+SRLANWEGI+KS SIRDFD HAT +VGK+ETVDTYYR CSSSTYV +VSIPLLCIS+LD
Sbjct: 306 FSRLANWEGIEKSISIRDFDHHATRIVGKYETVDTYYRRCSSSTYVQSVSIPLLCISALD 365
Query: 367 DPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSSPY 426
DPVCT EAIPWDECRANKN+VLAT HGGHLAFFEG+TA+G+WWVRAVNE+LG L +S +
Sbjct: 366 DPVCTREAIPWDECRANKNIVLATVKHGGHLAFFEGITASGLWWVRAVNEFLGELRASHF 425
Query: 427 MHVRKKVQEPGLHLSTESSIDQGPYLNVSEDGMVAAVGNE-QTRN----SIVGDHQTNS- 480
MHV+KK+ +P + L +SSIDQGPY+NV EDGMVAA+ NE +T N ++ D +
Sbjct: 426 MHVQKKITKPTIPL--DSSIDQGPYVNVKEDGMVAALNNEPKTDNVEEIQVIQDTDNDGL 483
Query: 481 EMVLD---TEQDEQLTGAKSDAVPNTDRTCEPPANTPDTELRNLTASVTSCWNQLSQRNK 537
EM+ + +QDE T AK P + C A ++ QLS++N+
Sbjct: 484 EMIPEEKVVKQDELETNAKIRGSPGIAQACVHDAAV------HVITPFKRDLGQLSRQNR 537
Query: 538 RSMWLLAYVAIITTWPLVGSALRFIFGKKRKNVLSATLTKR 578
S+WLL Y+AI T+WPLVGSAL +FGKK +++L L ++
Sbjct: 538 WSIWLLVYIAITTSWPLVGSALYIVFGKKIRDILPNGLVRK 578
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356535695|ref|XP_003536379.1| PREDICTED: embryogenesis-associated protein EMB8-like isoform 2 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 731 bits (1886), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/582 (61%), Positives = 444/582 (76%), Gaps = 18/582 (3%)
Query: 7 SSSSSSSSLNGDAYALLFNALRLIPISHYVLALSLLFVIVIYNFLEFHFVEDLFSGFRGS 66
S SS++++ G+ Y LLF AL LIPISHY+L S +F+ +Y FLE HF++DLFS F GS
Sbjct: 6 SCSSTTTTTTGNPYCLLFQALSLIPISHYLLFSSFVFLSFLYRFLELHFLQDLFSLFSGS 65
Query: 67 PVRLTFNSSSPIYDGVVSKCKIVHGRYLVTPWLSSPHIQTAFLHFFGRPPCFSYRRQLFR 126
V LT++ +S YD VVSKC+I+HG YL TPWLSSPH+QT FL+FFGRPP F YRRQLF
Sbjct: 66 SVTLTYHPASQFYDAVVSKCRILHGTYLATPWLSSPHLQTVFLNFFGRPPFFKYRRQLFT 125
Query: 127 LSDGGMIALDWLMGSTGPGDVFHAN-NFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNT 185
DGG +ALDWL+ S G + N N +S D++TPI +VIPGLTSDS+++Y++HL ++T
Sbjct: 126 TPDGGTVALDWLLSSDGIIIIIIINTNVVSTDESTPIVVVIPGLTSDSSSAYLKHLAYHT 185
Query: 186 AKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGAN 245
AK GW VVVSNHRGLGGVSITSDCFYNAGWTED R V+ YLH E P+APLF +GTSIGAN
Sbjct: 186 AKCGWKVVVSNHRGLGGVSITSDCFYNAGWTEDVRTVVNYLHKENPRAPLFVVGTSIGAN 245
Query: 246 ILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEP 305
IL+KYLGE+GE PVAGA A+CSPWDLLIGDRFI RR +QK YD+AL IGLQ YA+LH+P
Sbjct: 246 ILIKYLGEDGENIPVAGAVAVCSPWDLLIGDRFITRRHVQKFYDKALAIGLQGYAKLHQP 305
Query: 306 RYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSL 365
+SRLANWEGI+KS SIRDFD HAT +VGK+ETVDTYYR CSSSTYV +VSIPLLCIS+L
Sbjct: 306 HFSRLANWEGIEKSISIRDFDHHATRIVGKYETVDTYYRRCSSSTYVQSVSIPLLCISAL 365
Query: 366 DDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSSP 425
DDPVCT EAIPWDECRANKN+VLAT HGGHLAFFEG+TA+G+WWVRAVNE+LG L +S
Sbjct: 366 DDPVCTREAIPWDECRANKNIVLATVKHGGHLAFFEGITASGLWWVRAVNEFLGELRASH 425
Query: 426 YMHVRKKVQEPGLHLSTESSIDQGPYLNVSEDGMVAAVGNE-QTRN----SIVGDHQTNS 480
+MHV+KK+ +P + L +SSIDQGPY+NV EDGMVAA+ NE +T N ++ D +
Sbjct: 426 FMHVQKKITKPTIPL--DSSIDQGPYVNVKEDGMVAALNNEPKTDNVEEIQVIQDTDNDG 483
Query: 481 -EMVLD---TEQDEQLTGAKSDAVPNTDRTCEPPANTPDTELRNLTASVTSCWNQLSQRN 536
EM+ + +QDE T AK P + C A ++ QLS++N
Sbjct: 484 LEMIPEEKVVKQDELETNAKIRGSPGIAQACVHDAAV------HVITPFKRDLGQLSRQN 537
Query: 537 KRSMWLLAYVAIITTWPLVGSALRFIFGKKRKNVLSATLTKR 578
+ S+WLL Y+AI T+WPLVGSAL +FGKK +++L L ++
Sbjct: 538 RWSIWLLVYIAITTSWPLVGSALYIVFGKKIRDILPNGLVRK 579
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225448142|ref|XP_002263770.1| PREDICTED: embryogenesis-associated protein EMB8 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 716 bits (1848), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/563 (63%), Positives = 440/563 (78%), Gaps = 6/563 (1%)
Query: 20 YALLFNALRLIPISHYVLALSLLFVIVIYNFLEFHFVEDLF-SGFRGSPVRLTFNSSSPI 78
Y LLF +L LIPISHY+L LL ++ +YNFLE H + DL +GFRG PV LTF S S +
Sbjct: 8 YDLLFKSLSLIPISHYLLGFLLLSLVFLYNFLEIHLLRDLIATGFRGHPVSLTFASGSEL 67
Query: 79 YDGVVSKCKIVHGRYLVTPWLSSPHIQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDWL 138
Y+ V SKC+I+HGRYL T WLSSPH+QTAFL FFGRPP FSYRRQLF SDGG IALDWL
Sbjct: 68 YEAVASKCQILHGRYLATSWLSSPHLQTAFLSFFGRPPVFSYRRQLFHTSDGGTIALDWL 127
Query: 139 MGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHR 198
M S G + N+ I KDD TPI +VIPGLTSDSA++YI+HL F AK GWNVVVSNHR
Sbjct: 128 MNSDVMGVAINMNDTIRKDDKTPIVVVIPGLTSDSASAYIKHLAFKMAKSGWNVVVSNHR 187
Query: 199 GLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKT 258
GLGG+S+TSDC YNAGWTED R+++ +LH +YP+APLFA+GTSIGAN+LVKYLGE+G
Sbjct: 188 GLGGISVTSDCMYNAGWTEDIRKIVDHLHCQYPEAPLFAVGTSIGANVLVKYLGEDGVNI 247
Query: 259 PVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKK 318
P+ GAAAICS WDLLI DRFI R+L+QK YD+ALTIGLQ YAQLH+P SRLA+WEGIKK
Sbjct: 248 PLVGAAAICSTWDLLICDRFINRKLVQKFYDKALTIGLQGYAQLHQPILSRLADWEGIKK 307
Query: 319 SRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWD 378
SRS+RDFD++AT LVGK+ETVDTYYR CSS+++VGNVS+PLLCIS+LDDPVCT EAIPWD
Sbjct: 308 SRSVRDFDNYATRLVGKYETVDTYYRRCSSASFVGNVSVPLLCISTLDDPVCTREAIPWD 367
Query: 379 ECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSSPYMHVRKKVQEPGL 438
EC+ANKN++LATT HGGHL FFEGLTA +WWVRAV+E+ VLHS+ ++H +K+ Q L
Sbjct: 368 ECKANKNIILATTKHGGHLGFFEGLTAKSLWWVRAVDEFFNVLHSTEFIHRKKEAQVSPL 427
Query: 439 HLSTESSIDQGPYLNVSEDGMVAAVGNEQTRNSIVGDHQTNSEMVLDTEQDE-QLTGAKS 497
+ ESSIDQGPY+NV++DGMV A+GN+QT ++ + + E L TE+DE +++ A++
Sbjct: 428 PVPLESSIDQGPYVNVTKDGMVTAIGNKQT--NMEEEEELCHEHTLHTEKDEDKVSVAEA 485
Query: 498 DAVPNTDRT-CEPPANTPDTELRN-LTASVTSCWNQLSQRNKRSMWLLAYVAIITTWPLV 555
+ +RT + + P R+ +TA V +QLS+ +++S+WLL Y+AI+TTWPLV
Sbjct: 486 SGNKSKERTHSKTELSQPSEHDRSRVTAPVKRRMDQLSRYSRKSIWLLVYIAIVTTWPLV 545
Query: 556 GSALRFIFGKKRKNVLSATLTKR 578
GSAL KK KNVL A L R
Sbjct: 546 GSALLLTLKKKFKNVLPAALLGR 568
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356576171|ref|XP_003556207.1| PREDICTED: embryogenesis-associated protein EMB8-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 713 bits (1841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/570 (61%), Positives = 428/570 (75%), Gaps = 16/570 (2%)
Query: 18 DAYALLFNALRLIPISHYVLALSLLFVIVIYNFLEFHFVEDLFSGFRGSPVRLTFNSSSP 77
+ Y LLF AL LIPI HY+L +S +F+ Y FLE HF++DLFS F GS V LT++ S
Sbjct: 12 NPYCLLFQALSLIPIWHYLLFVSFVFLSFFYRFLELHFLQDLFSLFSGSSVTLTYHHGSQ 71
Query: 78 IYDGVVSKCKIVHGRYLVTPWLSSPHIQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDW 137
YD VVSKC+I+HG YL TPWLSSPH+QT FL+FFGRPP F YRRQLF DGG +ALDW
Sbjct: 72 FYDAVVSKCRILHGTYLATPWLSSPHLQTVFLNFFGRPPLFKYRRQLFTTPDGGTVALDW 131
Query: 138 LMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 197
L+ S H + +S D++TPI +VIPGLTSDS+++Y++HL ++TAK GW VVVSNH
Sbjct: 132 LLSSDVSAGAIHMEDVVSTDESTPIVVVIPGLTSDSSSAYLKHLAYHTAKCGWKVVVSNH 191
Query: 198 RGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEK 257
RGLGGVSITSDCFYNAGWTED R V+ YLH E P+APLF +GTSIGANIL+KYLGE+GE
Sbjct: 192 RGLGGVSITSDCFYNAGWTEDVRTVVNYLHKENPRAPLFVVGTSIGANILIKYLGEDGEN 251
Query: 258 TPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIK 317
PVAGA A+CSPWDLLIGDRFI RR +QK YD+AL IGLQ YA+LH+P +SRLANWEGI+
Sbjct: 252 IPVAGAVAVCSPWDLLIGDRFITRRRVQKFYDKALAIGLQGYAKLHQPHFSRLANWEGIE 311
Query: 318 KSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPW 377
KS SIRDFD HAT +VGK+ETVDTYYR CSSS YV +VSIPLLCIS+LDDPVCT EAIPW
Sbjct: 312 KSISIRDFDDHATRIVGKYETVDTYYRRCSSSIYVQSVSIPLLCISALDDPVCTREAIPW 371
Query: 378 DECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSSPYMHVRKKVQEPG 437
DECRANKN+VLAT HGGHLAFFEG+TA+G+WWVRAVNE+LG L +S +MHV+KK+ +P
Sbjct: 372 DECRANKNIVLATVKHGGHLAFFEGITASGLWWVRAVNEFLGELRASHFMHVQKKIAKPT 431
Query: 438 LHLSTESSIDQGPYLNVSEDGMVAAVGNE-QTRN----SIVGDHQTNSEMVLDTE----Q 488
+ L +SSIDQGPY+NV EDGMVAA+ E +T N ++ D ++ ++ E Q
Sbjct: 432 IPL--DSSIDQGPYVNVKEDGMVAALNKEPKTDNVEEIQVIQDTHSDGLNMIPEEKVVKQ 489
Query: 489 DEQLTGAKSDAVPNTDRTCEPPANTPDTELRNLTASVTSCWNQLSQRNKRSMWLLAYVAI 548
DE T +K+ P C + N+ QLS++N+ S+WLL Y+AI
Sbjct: 490 DELETNSKTGGSP-----CIAQVASAQDAAVNVITPFKRYLGQLSRQNRWSIWLLVYIAI 544
Query: 549 ITTWPLVGSALRFIFGKKRKNVLSATLTKR 578
T+WPLVGSAL +FGKK +++L L R
Sbjct: 545 TTSWPLVGSALYIVFGKKIRDILPNGLVGR 574
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297739535|emb|CBI29717.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 709 bits (1831), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/560 (63%), Positives = 429/560 (76%), Gaps = 23/560 (4%)
Query: 20 YALLFNALRLIPISHYVLALSLLFVIVIYNFLEFHFVEDLF-SGFRGSPVRLTFNSSSPI 78
Y LLF +L LIPISHY+L LL ++ +YNFLE H + DL +GFRG PV LTF S S +
Sbjct: 8 YDLLFKSLSLIPISHYLLGFLLLSLVFLYNFLEIHLLRDLIATGFRGHPVSLTFASGSEL 67
Query: 79 YDGVVSKCKIVHGRYLVTPWLSSPHIQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDWL 138
Y+ V SKC+I+HGRYL T WLSSPH+QTAFL FFGRPP FSYRRQLF SDGG IALDWL
Sbjct: 68 YEAVASKCQILHGRYLATSWLSSPHLQTAFLSFFGRPPVFSYRRQLFHTSDGGTIALDWL 127
Query: 139 MGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHR 198
M S G + N+ I KDD TPI +VIPGLTSDSA++YI+HL F AK GWNVVVSNHR
Sbjct: 128 MNSDVMGVAINMNDTIRKDDKTPIVVVIPGLTSDSASAYIKHLAFKMAKSGWNVVVSNHR 187
Query: 199 GLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKT 258
GLGG+S+TSDC YNAGWTED R+++ +LH +YP+APLFA+GTSIGAN+LVKYLGE+G
Sbjct: 188 GLGGISVTSDCMYNAGWTEDIRKIVDHLHCQYPEAPLFAVGTSIGANVLVKYLGEDGVNI 247
Query: 259 PVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKK 318
P+ GAAAICS WDLLI DRFI R+L+QK YD+ALTIGLQ YAQLH+P SRLA+WEGIKK
Sbjct: 248 PLVGAAAICSTWDLLICDRFINRKLVQKFYDKALTIGLQGYAQLHQPILSRLADWEGIKK 307
Query: 319 SRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWD 378
SRS+RDFD++AT LVGK+ETVDTYYR CSS+++VGNVS+PLLCIS+LDDPVCT EAIPWD
Sbjct: 308 SRSVRDFDNYATRLVGKYETVDTYYRRCSSASFVGNVSVPLLCISTLDDPVCTREAIPWD 367
Query: 379 ECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSSPYMHVRKKVQEPGL 438
EC+ANKN++LATT HGGHL FFEGLTA +WWVRAV+E+ VLHS+ ++H +K+ Q L
Sbjct: 368 ECKANKNIILATTKHGGHLGFFEGLTAKSLWWVRAVDEFFNVLHSTEFIHRKKEAQVSPL 427
Query: 439 HLSTESSIDQGPYLNVSEDGMVAAVGNEQTRNSIVGDHQTNSEMVLDTEQDEQLTGAKSD 498
+ ESSIDQGPY+NV++DGMV A+GN+QT ++ + + E L TE+DE D
Sbjct: 428 PVPLESSIDQGPYVNVTKDGMVTAIGNKQT--NMEEEEELCHEHTLHTEKDE-------D 478
Query: 499 AVPNTDRTCEPPANTPDTELRNLTASVTSCWNQLSQRNKRSMWLLAYVAIITTWPLVGSA 558
DR+ +TA V +QLS+ +++S+WLL Y+AI+TTWPLVGSA
Sbjct: 479 KPSEHDRS-------------RVTAPVKRRMDQLSRYSRKSIWLLVYIAIVTTWPLVGSA 525
Query: 559 LRFIFGKKRKNVLSATLTKR 578
L KK KNVL A L R
Sbjct: 526 LLLTLKKKFKNVLPAALLGR 545
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357443437|ref|XP_003591996.1| Embryogenesis-associated protein EMB8 [Medicago truncatula] gi|355481044|gb|AES62247.1| Embryogenesis-associated protein EMB8 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 701 bits (1809), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/576 (60%), Positives = 423/576 (73%), Gaps = 36/576 (6%)
Query: 20 YALLFNALRLIPISHYVLALSLLFVIVIYNFLEFHFVEDLFSGFRGSPVRLTFNSSSPIY 79
Y LL +L LIPI+HY+LA + +YNFLE HF++DL +GF GS V T+NSSS IY
Sbjct: 19 YNLLLQSLSLIPINHYLLATAFALTYFLYNFLEIHFLQDLLTGFSGSTVHFTYNSSSVIY 78
Query: 80 DGVVSKCKIVHGRYLVTPWLSSPHIQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDWLM 139
D VVSKC+I+HGRY VTPWLSSPH+QT FL+FFG PP F Y+RQLF DGG IALDW++
Sbjct: 79 DAVVSKCRILHGRYSVTPWLSSPHLQTVFLNFFGNPPTFKYKRQLFNTPDGGTIALDWVI 138
Query: 140 GSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRG 199
S A + ++KD++ P+ +VIPGLTSDS + Y++HL ++TAKRGW VVVSNHRG
Sbjct: 139 NS------HDAESAVAKDESNPVVVVIPGLTSDSFSPYLKHLAYHTAKRGWKVVVSNHRG 192
Query: 200 LGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTP 259
LGGVSITSDCFYNAGWT DAR V+ Y+H P+APLF IGTSIGAN+L+KYLGE+GE P
Sbjct: 193 LGGVSITSDCFYNAGWTVDARTVVNYVHKANPRAPLFLIGTSIGANVLIKYLGEDGENIP 252
Query: 260 VAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKS 319
VAGA A+CSPWDLLIGDRFI R+ +QK YD+AL GLQ YA+LH+P +SRLANWEGI+KS
Sbjct: 253 VAGAVAVCSPWDLLIGDRFITRKRVQKFYDKALAFGLQGYAKLHQPHFSRLANWEGIEKS 312
Query: 320 RSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDE 379
SIRDFD+HAT +VGK+ETVDTYYR SSS YV +VSIPLLCIS+LDDPVCT EAIPWDE
Sbjct: 313 LSIRDFDNHATRIVGKYETVDTYYRRNSSSIYVQSVSIPLLCISALDDPVCTREAIPWDE 372
Query: 380 CRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSSPYMHVRKKVQEPGLH 439
CRANKNVVLAT HGGHLAFFEG+TA+ +WWVRA NE+L VL SS MHV+KK+ P
Sbjct: 373 CRANKNVVLATLKHGGHLAFFEGITASSLWWVRAANEFLDVLLSSNCMHVQKKISAPNKL 432
Query: 440 LSTESSIDQGPYLNVSEDGMVAAVGNEQTRNSIVGDHQTNSEMVLDTEQDEQLTGAKSDA 499
L +S+IDQGPY+NVSEDGMVAA+ N T +++ +D QD+ G D
Sbjct: 433 L--DSAIDQGPYVNVSEDGMVAALNNGPTVDNV---------NQIDARQDKHHDG--HDR 479
Query: 500 VPNTDRTCEPPANT--PDTELRNLTASVTSCWN---------------QLSQRNKRSMWL 542
VP + E NT + + A TS N QLS++N+ S+WL
Sbjct: 480 VPEGSKRDELVTNTNKESVDSSSCIAQTTSAHNPVPLDVVTPFKRYLGQLSRQNRWSIWL 539
Query: 543 LAYVAIITTWPLVGSALRFIFGKKRKNVLSATLTKR 578
LAY+AI T+WPLVGSAL +FGK+ +N+L L +R
Sbjct: 540 LAYIAITTSWPLVGSALHLVFGKRLRNILPRGLVRR 575
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224108972|ref|XP_002333321.1| predicted protein [Populus trichocarpa] gi|222836214|gb|EEE74635.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 697 bits (1799), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/566 (60%), Positives = 425/566 (75%), Gaps = 28/566 (4%)
Query: 12 SSSLNGDAYALLFNALRLIPISHYVLALSLLFVIVIYNFLEFHFVEDLFSGFRGSPVRLT 71
SSSL+ Y LLFNAL IP HY++A ++ + +Y FLE HF ED+F +G+P+ T
Sbjct: 3 SSSLS--PYILLFNALSQIPTCHYLVAFLIISITFLYKFLEVHFFEDVFFKSQGTPI--T 58
Query: 72 FNSSSPIYDGVVSKCKIVHGRYLVTPWLSSPHIQTAFLHFFGRPPCFSYRRQLFRLSDGG 131
+N SSP + ++S CKI+H R++ T W+SSPH QTAFL F GR P FSYRR LFR SDGG
Sbjct: 59 YNPSSPFCNAILSSCKILHSRFVATTWISSPHFQTAFLQFCGRSPVFSYRRHLFRTSDGG 118
Query: 132 MIALDWLMGSTGP----GDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAK 187
IALDWLM + G G NN IS+D+TTPI +V+PGL S S ++Y+++L FN AK
Sbjct: 119 TIALDWLMNADGAFGINGASLPMNNAISQDETTPIVVVVPGLASSSTSNYLKNLAFNLAK 178
Query: 188 RGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANIL 247
GWNVVVSNHRGLGGVSITSDCFYNAGWTED R V YLH +YPKAPLFAIGTSIGANIL
Sbjct: 179 HGWNVVVSNHRGLGGVSITSDCFYNAGWTEDLRAVANYLHDKYPKAPLFAIGTSIGANIL 238
Query: 248 VKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRY 307
VKYLGE+GE TP+AGA A+C+PWDLLIGDRFI RRL+Q+IYD+ALTIGLQ YAQLHEP Y
Sbjct: 239 VKYLGEDGEGTPIAGAVAVCNPWDLLIGDRFICRRLLQRIYDKALTIGLQGYAQLHEPLY 298
Query: 308 SRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDD 367
+RLANWEGIK +R IRD+D++ATC VGKFETVDTYYR+CSS+ YVGNVS+PLLCIS+LDD
Sbjct: 299 TRLANWEGIKTARCIRDYDNYATCHVGKFETVDTYYRHCSSAAYVGNVSVPLLCISALDD 358
Query: 368 PVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSSPYM 427
PVCT EAIPWDECRAN N+VLAT HGGHLAFFEGLTA+ WW+RAV+E+LGVL SSPY+
Sbjct: 359 PVCTREAIPWDECRANPNIVLATPQHGGHLAFFEGLTASSSWWIRAVDEFLGVLRSSPYI 418
Query: 428 HVRKKVQEPGLHLSTESSIDQGPYLNVSEDGMVAAVGNEQTRNSIVGDHQTNSEMVLDTE 487
H Q G H + +SSIDQ P+L+V+EDG+V A E+ + I + N +M+ + +
Sbjct: 419 H----KQTSGQHSALDSSIDQYPHLHVAEDGIVTAASGEEKTDGI--EDIKNLQMLSEEK 472
Query: 488 QDEQLTGAKSDAVPNTDRTCEPPANTPDTELRNLTASVTSCWNQLSQRNKRSMWLLAYVA 547
E L+ A+ + + +PD +T+ + NQ+SQ+N S+WLLA++A
Sbjct: 473 TTEMLSNAEQE---------KHGVESPD-----ITSPLRRFLNQISQQNSISIWLLAFIA 518
Query: 548 IITTWPLVGSALRFIFGKKRKNVLSA 573
I T+WPLVGS +FIF K+ + ++ A
Sbjct: 519 IRTSWPLVGSLTKFIFRKRSRKIMPA 544
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|42562518|ref|NP_174694.2| alpha/beta-hydrolase domain-containing protein [Arabidopsis thaliana] gi|5091614|gb|AAD39602.1|AC007454_1 Contains a PF|00561 alpha/beta hydrolase fold domain [Arabidopsis thaliana] gi|12323861|gb|AAG51902.1|AC023913_10 late embryogenesis abundant protein, putative; 78257-75162 [Arabidopsis thaliana] gi|332193577|gb|AEE31698.1| alpha/beta-hydrolase domain-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/561 (59%), Positives = 411/561 (73%), Gaps = 40/561 (7%)
Query: 15 LNGDAYALLFNALRLIPISHYVLALSLLFVIVIYNFLEFHFVEDLFSGFRGSPVRLTFNS 74
L+ Y LLF AL LIPI HY++AL +L I YNF+EFHF+ D + V L +N
Sbjct: 8 LSPSPYDLLFQALTLIPIRHYLIALFVLCTIFFYNFVEFHFLGDAILRYFRCRVNLIYNP 67
Query: 75 SSPIYDGVVSKCKIVHGRYLVTPWLSSPHIQTAFLHFFGRPPCFSYRRQLFRLSDGGMIA 134
SP+Y GVVS+C+I+HGRY+ TPWL+SPHIQT FL+F G PP F+Y RQLF SDGG IA
Sbjct: 68 DSPLYHGVVSRCQILHGRYVATPWLASPHIQTCFLNFHGLPPVFTYTRQLFLTSDGGTIA 127
Query: 135 LDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVV 194
LDWL S H + I+K+DTTPIA+VIPGLTSDS+++Y++HL ++TAK GWNVV+
Sbjct: 128 LDWLTNSDVLDGSLHNKSEITKEDTTPIAVVIPGLTSDSSSAYLKHLAYDTAKTGWNVVI 187
Query: 195 SNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEE 254
SNHRGLGGVS+TSDCFYNAGWT+D R V+ YL H+YP+APLFAIGTSIGAN+LVKYLGEE
Sbjct: 188 SNHRGLGGVSVTSDCFYNAGWTDDIRVVLDYLQHKYPRAPLFAIGTSIGANVLVKYLGEE 247
Query: 255 GEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWE 314
GEKTP+ GA AICSPWDLLIGDRFI R L QK+YD+ALTIGLQ YAQLHEP++ RLANWE
Sbjct: 248 GEKTPLRGAVAICSPWDLLIGDRFICRTLKQKLYDKALTIGLQGYAQLHEPQFLRLANWE 307
Query: 315 GIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEA 374
GIKKSRSIRDFD+HATCLVGKFETVDTYYR SS+ YVGNV++PLLCIS+LDDP+CT EA
Sbjct: 308 GIKKSRSIRDFDNHATCLVGKFETVDTYYRKSSSTQYVGNVAVPLLCISALDDPLCTKEA 367
Query: 375 IPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSSPYMHVRKKV- 433
IPWDECRANKN+VLATT HGGHLAFFEGLT + +WWVRA NE+LGVL SPYMH++K V
Sbjct: 368 IPWDECRANKNIVLATTNHGGHLAFFEGLTGSSLWWVRATNEFLGVLSCSPYMHIQKIVD 427
Query: 434 QEPGLHLSTESSIDQGPYLNVSEDGMVAAVGNEQTRNSIVGDHQTNSEMVLDTEQDEQLT 493
+ E SI+QGPYLN++EDG+VAAV EQ N + T
Sbjct: 428 KRSSGSGKQEPSINQGPYLNIAEDGLVAAVKYEQDTN--------------------KTT 467
Query: 494 GAKSDAVPNTDRTCEPPANTPDTELRNLTASVTSCWNQLSQRNKRSMWLLAYVAIITTWP 553
+ P D T + +L ++ K+S+W L Y+ ++T++P
Sbjct: 468 LKQRGRKPEEDVT-------------------KKSFKELCRQTKQSVWWLGYIGMVTSFP 508
Query: 554 LVGSALRFIFGKKRKNVLSAT 574
L+G L +IF KK++ ++T
Sbjct: 509 LLGMLLNYIFRKKQRPTTTST 529
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 578 | ||||||
| TAIR|locus:2026140 | 530 | AT1G34340 "AT1G34340" [Arabido | 0.788 | 0.860 | 0.691 | 9.7e-185 | |
| TAIR|locus:2158854 | 537 | AT5G49950 "AT5G49950" [Arabido | 0.894 | 0.962 | 0.559 | 4.1e-159 | |
| TAIR|locus:2077937 | 408 | AT3G50790 [Arabidopsis thalian | 0.525 | 0.745 | 0.361 | 2e-49 | |
| UNIPROTKB|F1P9D8 | 408 | ABHD3 "Uncharacterized protein | 0.532 | 0.754 | 0.337 | 1.8e-46 | |
| UNIPROTKB|I3LPK4 | 410 | ABHD3 "Uncharacterized protein | 0.536 | 0.756 | 0.330 | 2.3e-46 | |
| UNIPROTKB|Q8WU67 | 409 | ABHD3 "Abhydrolase domain-cont | 0.536 | 0.757 | 0.330 | 3.8e-46 | |
| UNIPROTKB|Q0VC00 | 411 | ABHD3 "Abhydrolase domain-cont | 0.536 | 0.754 | 0.327 | 4.8e-46 | |
| UNIPROTKB|F1NTP8 | 448 | ABHD3 "Uncharacterized protein | 0.532 | 0.687 | 0.331 | 6.2e-46 | |
| MGI|MGI:2147183 | 411 | Abhd3 "abhydrolase domain cont | 0.532 | 0.749 | 0.331 | 2.1e-45 | |
| RGD|1310655 | 411 | Abhd3 "abhydrolase domain cont | 0.532 | 0.749 | 0.325 | 7.3e-43 |
| TAIR|locus:2026140 AT1G34340 "AT1G34340" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1713 (608.1 bits), Expect = 9.7e-185, Sum P(2) = 9.7e-185
Identities = 316/457 (69%), Positives = 372/457 (81%)
Query: 15 LNGDAYALLFNALRLIPISHYVLALSLLFVIVIYNFLEFHFVEDLFSGFRGSPVRLTFNS 74
L+ Y LLF AL LIPI HY++AL +L I YNF+EFHF+ D + V L +N
Sbjct: 8 LSPSPYDLLFQALTLIPIRHYLIALFVLCTIFFYNFVEFHFLGDAILRYFRCRVNLIYNP 67
Query: 75 SSPIYDGVVSKCKIVHGRYLVTPWLSSPHIQTAFLHFFGRPPCFSYRRQLFRLSDGGMIA 134
SP+Y GVVS+C+I+HGRY+ TPWL+SPHIQT FL+F G PP F+Y RQLF SDGG IA
Sbjct: 68 DSPLYHGVVSRCQILHGRYVATPWLASPHIQTCFLNFHGLPPVFTYTRQLFLTSDGGTIA 127
Query: 135 LDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVV 194
LDWL S H + I+K+DTTPIA+VIPGLTSDS+++Y++HL ++TAK GWNVV+
Sbjct: 128 LDWLTNSDVLDGSLHNKSEITKEDTTPIAVVIPGLTSDSSSAYLKHLAYDTAKTGWNVVI 187
Query: 195 SNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEE 254
SNHRGLGGVS+TSDCFYNAGWT+D R V+ YL H+YP+APLFAIGTSIGAN+LVKYLGEE
Sbjct: 188 SNHRGLGGVSVTSDCFYNAGWTDDIRVVLDYLQHKYPRAPLFAIGTSIGANVLVKYLGEE 247
Query: 255 GEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWE 314
GEKTP+ GA AICSPWDLLIGDRFI R L QK+YD+ALTIGLQ YAQLHEP++ RLANWE
Sbjct: 248 GEKTPLRGAVAICSPWDLLIGDRFICRTLKQKLYDKALTIGLQGYAQLHEPQFLRLANWE 307
Query: 315 GIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEA 374
GIKKSRSIRDFD+HATCLVGKFETVDTYYR SS+ YVGNV++PLLCIS+LDDP+CT EA
Sbjct: 308 GIKKSRSIRDFDNHATCLVGKFETVDTYYRKSSSTQYVGNVAVPLLCISALDDPLCTKEA 367
Query: 375 IPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSSPYMHVRKKVQ 434
IPWDECRANKN+VLATT HGGHLAFFEGLT + +WWVRA NE+LGVL SPYMH++K V
Sbjct: 368 IPWDECRANKNIVLATTNHGGHLAFFEGLTGSSLWWVRATNEFLGVLSCSPYMHIQKIVD 427
Query: 435 EPGLHLST-ESSIDQGPYLNVSEDGMVAAVGNEQTRN 470
+ E SI+QGPYLN++EDG+VAAV EQ N
Sbjct: 428 KRSSGSGKQEPSINQGPYLNIAEDGLVAAVKYEQDTN 464
|
|
| TAIR|locus:2158854 AT5G49950 "AT5G49950" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1550 (550.7 bits), Expect = 4.1e-159, P = 4.1e-159
Identities = 311/556 (55%), Positives = 395/556 (71%)
Query: 20 YALLFNALRLIPISHYVLALSLLFVIVIYNFLEFHFVEDLFSGFRGSPVRLTFNSSSPIY 79
Y ++F +L LIPISHY++ L ++ +Y FLE HF + P+ LTFN +S
Sbjct: 14 YLIIFKSLLLIPISHYLIFFFLTILLFLYFFLEIHFP-------KADPISLTFNPNSDFC 66
Query: 80 DGVVSKCKIVHGRYLVTPWLSSPHIQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDWLM 139
+VSKC+++HGRY T WLSSPH+QTAFL FG+ P FSY+R L++ +DGG IALDWLM
Sbjct: 67 KFIVSKCRLLHGRYFPTFWLSSPHLQTAFLTLFGKSPPFSYKRILYQATDGGTIALDWLM 126
Query: 140 GST---GPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSN 196
S G V +A+N D TPIAI++PGLTSDS+A+YI+H+ F AK GWNVVV N
Sbjct: 127 HSDVVEGISQVVNASN--PGTDRTPIAIIVPGLTSDSSAAYIKHIAFRLAKEGWNVVVQN 184
Query: 197 HRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGE 256
HRGLGG+S+TSDC Y AGWTED R+VI ++H ++P+APLFA+GTSIGAN+LVKYLGE+G
Sbjct: 185 HRGLGGISLTSDCVYTAGWTEDLRKVIAHIHSQFPEAPLFAVGTSIGANVLVKYLGEDGP 244
Query: 257 KTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGI 316
TP+ GA A+CSPWDLLI DRFI R+L+QK+YDR LTIGLQ YAQLH SR+A+WEGI
Sbjct: 245 NTPLIGATAVCSPWDLLICDRFINRKLVQKVYDRMLTIGLQGYAQLHHSIISRIADWEGI 304
Query: 317 KKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIP 376
KKSRS+R+FD++AT LV KFET DTYYR SSS YV NV++PLLCIS+LDDPVCT EAIP
Sbjct: 305 KKSRSVREFDNYATRLVAKFETTDTYYRRSSSSQYVENVAVPLLCISALDDPVCTREAIP 364
Query: 377 WDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSSPYMHVRKKV-QE 435
WDECRANKN+VLATT HGGHLA++EGLTA+ MWW R V+EY VL SSP+ R K+ E
Sbjct: 365 WDECRANKNIVLATTTHGGHLAYYEGLTASSMWWTRVVHEYFEVLLSSPFADRRHKIIPE 424
Query: 436 PGLHLSTESSIDQGPYLNVSEDGMVAAVGNEQTRNSIVGDHQTNSEMVLDTEQDEQLTGA 495
P L SSIDQGP+++ E GMVAA T T ++ + E + Q+
Sbjct: 425 P---LG--SSIDQGPFVDAGEHGMVAAASEVDT---------TRADA--EPEDNAQIYVK 468
Query: 496 KSDAVPNTDRTCEPPANTPDTELRNLTASVTSCWNQLSQRNKRSMWLLAYVAIITTWPLV 555
S+ + + D N P N+ + +QLS+ +++S+WLLAY+AI+TTWPLV
Sbjct: 469 TSNHL-HKD-------NNPQV-YNNILGPLKKRVDQLSRYSRKSIWLLAYIAIVTTWPLV 519
Query: 556 GSALRFIFGKK-RKNV 570
G AL F ++ RK V
Sbjct: 520 GPALLFSIKRRFRKLV 535
|
|
| TAIR|locus:2077937 AT3G50790 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 116/321 (36%), Positives = 170/321 (52%)
Query: 103 HIQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPI 162
H++T + FF P RR+ R D G +ALDW+ G + D +PI
Sbjct: 76 HVETIYASFFRSVPFVRLRRECLRTKDNGSVALDWVAGE---------DRHFPPD--SPI 124
Query: 163 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREV 222
I++PGLT S SY+RH++ + W VV N RG G +T+ FY+A + D EV
Sbjct: 125 LILLPGLTGGSQDSYVRHMLLRAQSKKWRCVVFNSRGCGDSPVTTPQFYSASFLGDIGEV 184
Query: 223 IGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRR 282
I ++ ++PKA L+A G S+G NILV YLG+E P+ A ++C+P+DL+I D +
Sbjct: 185 IDHVVDKFPKANLYAAGWSLGGNILVNYLGQESHNCPLTAAVSLCNPFDLVIADEDFHKG 244
Query: 283 LIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIK---KSRSIRDFDSHATCLVGKFETV 339
+YD+AL+ L+ H + + I + ++RDFD T + F++V
Sbjct: 245 F-NNVYDKALSKSLRRIFSKHSLLFEDIGGEFNIPLAANAETVRDFDDGLTRVSFGFKSV 303
Query: 340 DTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAF 399
D YY SSS + +V IPLLCI + +DP+ IP D+ +AN N VL T GGHL +
Sbjct: 304 DEYYSKSSSSKAIKHVRIPLLCIQAANDPIAPERGIPRDDIKANPNCVLIVTPRGGHLGW 363
Query: 400 FEGLTAA-GMWWV-RAVNEYL 418
G A G W + V E+L
Sbjct: 364 VAGEEAPNGAPWTDQVVMEFL 384
|
|
| UNIPROTKB|F1P9D8 ABHD3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
Identities = 108/320 (33%), Positives = 170/320 (53%)
Query: 86 CKIVHGRYLVTPWL-SSPHIQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDWLMGSTGP 144
C +V Y T W SP QT F P YR +L + +DGG I+LDW
Sbjct: 72 CPVVTETYYPTVWCWESPG-QTLLRPFITSKPSVQYRNELIKTADGGQISLDWF------ 124
Query: 145 GDVFHANNFISKDDTT-PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGV 203
D +++ ++ D TT P +++PGLT S SYI H++ + + G+ VV N+RG+ G
Sbjct: 125 -DNYNSKCYM--DATTRPTILLLPGLTGTSKESYILHMIHLSEELGYRCVVFNNRGVAGE 181
Query: 204 SITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGA 263
++ + Y TED VI ++H YP AP A G S+G +L+ YLG+ G KTP+ A
Sbjct: 182 NLLTPRTYCCANTEDLETVIHHVHSLYPSAPFLAAGVSMGGMLLLNYLGKIGPKTPLKAA 241
Query: 264 AAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIR 323
A W+ + + L +++ LT LQ H + + + + + K++SIR
Sbjct: 242 ATFSVGWNTFACSESLEKPLNWLLFNYYLTTCLQSSVNKHRHMFVKQIDMDHVMKAKSIR 301
Query: 324 DFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRAN 383
+FD T ++ ++T+D YY + S + + +V IP+LC++S+DD AIP + + N
Sbjct: 302 EFDKRFTSVMFGYQTIDDYYTDASPNRRLKSVGIPVLCLNSVDDVFSPSHAIPIETAKQN 361
Query: 384 KNVVLATTWHGGHLAFFEGL 403
NV L T +GGH+ F EG+
Sbjct: 362 PNVALVLTSYGGHIGFLEGI 381
|
|
| UNIPROTKB|I3LPK4 ABHD3 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
Identities = 105/318 (33%), Positives = 164/318 (51%)
Query: 86 CKIVHGRYLVTPWLSSPHIQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDWLMGSTGPG 145
C +V Y T W QT F P YR +L + +DGG I+LDW
Sbjct: 72 CPVVTETYYPTVWCWESRGQTLLRPFITSKPLVQYRNELIKTADGGQISLDWF------- 124
Query: 146 DVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSI 205
D + ++ T P +++PGLT S SYI H++ + + G+ VV N+RG+ G ++
Sbjct: 125 DNDSSKCYMDAS-TRPTVLLLPGLTGTSKESYILHMIHLSEELGYRCVVFNNRGVAGENL 183
Query: 206 TSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAA 265
+ Y TED VI ++H YP AP A G S+G +L+ YLG+ G KTP+ AA
Sbjct: 184 LTPRTYCCSNTEDLETVIQHVHSLYPSAPFLAAGVSMGGMLLLNYLGKIGPKTPLKAAAT 243
Query: 266 ICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDF 325
W+ + + L +++ LT LQ H + +L + + + K++SIR+F
Sbjct: 244 FSVGWNTFACSESLEKPLNWLLFNYYLTTCLQSSVNKHRHMFVKLIDMDHVMKAKSIREF 303
Query: 326 DSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKN 385
D T ++ + T+D YY + S + + +V IP+LC++S+DD AIP + + N N
Sbjct: 304 DKRFTAVMFGYRTIDDYYTDASPNRRLKSVGIPVLCLNSVDDVFSPSHAIPIETAKQNPN 363
Query: 386 VVLATTWHGGHLAFFEGL 403
V L T +GGH+ F EG+
Sbjct: 364 VALVLTSYGGHIGFLEGI 381
|
|
| UNIPROTKB|Q8WU67 ABHD3 "Abhydrolase domain-containing protein 3" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 484 (175.4 bits), Expect = 3.8e-46, P = 3.8e-46
Identities = 105/318 (33%), Positives = 165/318 (51%)
Query: 86 CKIVHGRYLVTPWLSSPHIQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDWLMGSTGPG 145
C +V Y T W QT F P YR +L + +DGG I+LDW
Sbjct: 73 CPVVTETYYPTVWCWEGRGQTLLRPFITSKPPVQYRNELIKTADGGQISLDWF------- 125
Query: 146 DVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSI 205
D ++ ++ T P +++PGLT S SYI H++ + + G+ VV N+RG+ G ++
Sbjct: 126 DNDNSTCYMDAS-TRPTILLLPGLTGTSKESYILHMIHLSEELGYRCVVFNNRGVAGENL 184
Query: 206 TSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAA 265
+ Y TED VI ++H YP AP A G S+G +L+ YLG+ G KTP+ AA
Sbjct: 185 LTPRTYCCANTEDLETVIHHVHSLYPSAPFLAAGVSMGGMLLLNYLGKIGSKTPLMAAAT 244
Query: 266 ICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDF 325
W+ + + L +++ LT LQ H + + + + + K++SIR+F
Sbjct: 245 FSVGWNTFACSESLEKPLNWLLFNYYLTTCLQSSVNKHRHMFVKQVDMDHVMKAKSIREF 304
Query: 326 DSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKN 385
D T ++ ++T+D YY + S S + +V IP+LC++S+DD AIP + + N N
Sbjct: 305 DKRFTSVMFGYQTIDDYYTDASPSPRLKSVGIPVLCLNSVDDVFSPSHAIPIETAKQNPN 364
Query: 386 VVLATTWHGGHLAFFEGL 403
V L T +GGH+ F EG+
Sbjct: 365 VALVLTSYGGHIGFLEGI 382
|
|
| UNIPROTKB|Q0VC00 ABHD3 "Abhydrolase domain-containing protein 3" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 104/318 (32%), Positives = 165/318 (51%)
Query: 86 CKIVHGRYLVTPWLSSPHIQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDWLMGSTGPG 145
C +V Y T W QT F P YR +L + +DGG I+LDW
Sbjct: 73 CPVVTETYYPTVWCWESRGQTLLRPFITSKPLVQYRNELIKTADGGQISLDWF------- 125
Query: 146 DVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSI 205
D ++ +++ T P +++PGLT S SYI H++ + + G+ VV N+RG+ G ++
Sbjct: 126 DNDNSKHYMDAS-TRPTVLLLPGLTGTSKESYILHMIHLSEELGYRYVVFNNRGVAGENL 184
Query: 206 TSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAA 265
+ Y TED VI ++H YP AP A G S+G +L+ YLG+ G KTP+ AA
Sbjct: 185 LTPRTYCCSNTEDLETVIHHVHSLYPSAPFLAAGVSMGGMLLLNYLGKIGPKTPLKAAAT 244
Query: 266 ICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDF 325
W+ + + L +++ LT LQ H + + + + + K++SIR+F
Sbjct: 245 FSVGWNTFACSESLEKPLNWLLFNYYLTTCLQSSVNKHRHMFVKQIDVDHVMKAKSIREF 304
Query: 326 DSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKN 385
D T ++ + T+D YY + S + + +V IP+LC++S+DD AIP + + N N
Sbjct: 305 DKRFTSVMFGYRTIDDYYTDASPNRRLKSVGIPVLCLNSVDDVFSPSHAIPIETAKQNPN 364
Query: 386 VVLATTWHGGHLAFFEGL 403
V L T +GGH+ F EG+
Sbjct: 365 VALVLTSYGGHIGFLEGI 382
|
|
| UNIPROTKB|F1NTP8 ABHD3 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
Identities = 106/320 (33%), Positives = 164/320 (51%)
Query: 86 CKIVHGRYLVTPWLSSPHIQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDWLMGSTGPG 145
C +V Y T W +QT F P YR +L R +DGG I+LDW
Sbjct: 110 CPVVTETYYPTIWCWEGRVQTLLRPFITSRPQVQYRNELIRTADGGQISLDW-------- 161
Query: 146 DVFHANNFISKDD--TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGV 203
F N+ + D T P +++PGLT S SYI H++ + G+ VV N+RG+ G
Sbjct: 162 --FDNNDSLYYPDASTRPTVLLLPGLTGTSKESYILHMIHQSETLGYRCVVFNNRGIAGE 219
Query: 204 SITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGA 263
+ + Y A TED VI ++H+ +P AP A G S+G +L+ YLG+ G TP+ A
Sbjct: 220 ELLTPRTYCAANTEDLEAVIHHIHNLHPSAPFMAAGVSMGGMLLLNYLGKTGRDTPLMAA 279
Query: 264 AAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIR 323
A + W++ + + L +++ LT LQ H +L + + + K+R++R
Sbjct: 280 AIFSAGWNVFESVESLEKPLNWLLFNYYLTTCLQSSISRHRQMLEKLFDMDLVMKARTVR 339
Query: 324 DFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRAN 383
+FD T ++ + T+D YY + S + +V IP+LC++S+DD AIP + + N
Sbjct: 340 EFDKQFTSVMFGYRTIDDYYEDASPCRKLKSVGIPVLCLNSVDDVFSPGHAIPVETAKQN 399
Query: 384 KNVVLATTWHGGHLAFFEGL 403
NV L T GGH+ F EG+
Sbjct: 400 ANVALVLTSCGGHIGFLEGI 419
|
|
| MGI|MGI:2147183 Abhd3 "abhydrolase domain containing 3" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 106/320 (33%), Positives = 162/320 (50%)
Query: 86 CKIVHGRYLVTPWLSSPHIQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDWLMGSTGPG 145
C +V Y T W QT F P YR +L + +DGG I+LDW
Sbjct: 73 CPVVTETYYPTVWCWESRGQTLLRPFITSKPPVQYRNELIKTADGGQISLDW-------- 124
Query: 146 DVFHANN--FISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGV 203
F NN + T P +++PGLT S SYI H++ + + G+ VV N+RG+ G
Sbjct: 125 --FDNNNSAYYVDASTRPTILLLPGLTGTSKESYILHMIHLSEELGYRCVVFNNRGVAGE 182
Query: 204 SITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGA 263
S+ + Y TED V+ ++H YP AP A G S+G +L+ YLG+ G KTP+ A
Sbjct: 183 SLLTPRTYCCANTEDLEAVVHHVHSLYPGAPFLAAGVSMGGMLLLNYLGKIGSKTPLMAA 242
Query: 264 AAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIR 323
A W+ + R L +++ LT LQ + H + + + + K++SIR
Sbjct: 243 ATFSVGWNTFACSESLERPLNWLLFNYYLTTCLQSSVKKHRHMFVEQIDMDQVMKAKSIR 302
Query: 324 DFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRAN 383
+FD T ++ + T+D YY + S + + +V IP+LC+++ DD AIP + + N
Sbjct: 303 EFDKRFTAVMFGYRTLDDYYTDASPNRRLKSVGIPVLCLNATDDVFSPSHAIPIETAKQN 362
Query: 384 KNVVLATTWHGGHLAFFEGL 403
NV L T +GGH+ F EG+
Sbjct: 363 PNVALVLTAYGGHIGFLEGI 382
|
|
| RGD|1310655 Abhd3 "abhydrolase domain containing 3" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 453 (164.5 bits), Expect = 7.3e-43, P = 7.3e-43
Identities = 104/320 (32%), Positives = 159/320 (49%)
Query: 86 CKIVHGRYLVTPWLSSPHIQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDWLMGSTGPG 145
C +V Y T W QT F P YR +L + +DGG I+LDW
Sbjct: 73 CPVVTETYYPTVWCWESRGQTLLRPFITAKPRVQYRNELIKTADGGQISLDW-------- 124
Query: 146 DVFHANNFISKDD--TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGV 203
F NN D T P +++PGLT S SYI H++ + + G+ ++R L +
Sbjct: 125 --FDNNNSACYVDASTRPTILLLPGLTGTSKESYILHMIHLSEELGYRCTTFSNRELASL 182
Query: 204 SITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGA 263
S+ + Y TED VI ++H YP AP A G S+G +L+ YLG+ G KTP+ A
Sbjct: 183 SLLTPRTYCCANTEDLEAVIHHVHSLYPLAPFLAAGVSMGGMLLLNYLGKIGSKTPLMAA 242
Query: 264 AAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIR 323
A W+ + R L +++ LT LQ + H + + + + K++SIR
Sbjct: 243 ATFSVGWNTFACSESLERPLNWLLFNYYLTTCLQSSVKKHRHMFVGQIDMDQVMKAKSIR 302
Query: 324 DFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRAN 383
+FD T ++ + T+D YY + S + + +V IP+LC+++ DD AIP + + N
Sbjct: 303 EFDRRFTSVMFGYRTLDDYYTDASPNRRLKSVGIPVLCLNAADDVFSPSHAIPIETAKQN 362
Query: 384 KNVVLATTWHGGHLAFFEGL 403
NV L T +GGH+ F EG+
Sbjct: 363 PNVALVLTSYGGHIGFLEGI 382
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.1.1 | 0.691 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 578 | |||
| PLN02511 | 388 | PLN02511, PLN02511, hydrolase | 2e-87 | |
| COG0429 | 345 | COG0429, COG0429, Predicted hydrolase of the alpha | 2e-70 | |
| PRK10985 | 324 | PRK10985, PRK10985, putative hydrolase; Provisiona | 3e-35 | |
| pfam00561 | 226 | pfam00561, Abhydrolase_1, alpha/beta hydrolase fol | 2e-09 | |
| COG2267 | 298 | COG2267, PldB, Lysophospholipase [Lipid metabolism | 3e-05 | |
| COG0596 | 282 | COG0596, MhpC, Predicted hydrolases or acyltransfe | 1e-04 | |
| pfam12697 | 187 | pfam12697, Abhydrolase_6, Alpha/beta hydrolase fam | 1e-04 | |
| COG2945 | 210 | COG2945, COG2945, Predicted hydrolase of the alpha | 8e-04 |
| >gnl|CDD|215282 PLN02511, PLN02511, hydrolase | Back alignment and domain information |
|---|
Score = 275 bits (706), Expect = 2e-87
Identities = 131/351 (37%), Positives = 188/351 (53%), Gaps = 21/351 (5%)
Query: 80 DGVVSKCKIVHGRYLVTPWLSSPHIQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDWLM 139
D + K K + Y P L + H++T F FF P YRR+ R DGG +ALDW+
Sbjct: 31 DSFLPKFKSLERPYDAFPLLGNRHVETIFASFFRSLPAVRYRRECLRTPDGGAVALDWVS 90
Query: 140 GS--TGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 197
G P D P+ I++PGLT S SY+RH++ +GW VVV N
Sbjct: 91 GDDRALPAD-------------APVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNS 137
Query: 198 RGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEK 257
RG +T+ FY+A +T D R+V+ ++ YP A L+A G S+GANILV YLGEEGE
Sbjct: 138 RGCADSPVTTPQFYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGEN 197
Query: 258 TPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLA---NWE 314
P++GA ++C+P+DL+I D + +YD+AL L+ H + L N
Sbjct: 198 CPLSGAVSLCNPFDLVIADEDF-HKGFNNVYDKALAKALRKIFAKHALLFEGLGGEYNIP 256
Query: 315 GIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEA 374
+ ++++RDFD T + F++VD YY N SSS + +V +PLLCI + +DP+
Sbjct: 257 LVANAKTVRDFDDGLTRVSFGFKSVDAYYSNSSSSDSIKHVRVPLLCIQAANDPIAPARG 316
Query: 375 IPWDECRANKNVVLATTWHGGHLAFFEGLTAA-GMWWVRA-VNEYLGVLHS 423
IP ++ +AN N +L T GGHL + G A G W V E+L L
Sbjct: 317 IPREDIKANPNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALEE 367
|
Length = 388 |
| >gnl|CDD|223506 COG0429, COG0429, Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Score = 229 bits (587), Expect = 2e-70
Identities = 108/340 (31%), Positives = 158/340 (46%), Gaps = 21/340 (6%)
Query: 87 KIVHGRYLVTPW-LSSPHIQTAFLHF--FGRPPCFSYRRQLFRLSDGGMIALDWLMGSTG 143
K V + PW L + H+QT + F R P +Y R+ DGG I LDW
Sbjct: 13 KKVSPPFDPLPWGLFNGHLQTLYPSLRLFRRKPKVAYTRERLETPDGGFIDLDWSE---- 68
Query: 144 PGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGV 203
+ P+ ++ GL S + Y R L+ ++RGW VVV + RG G
Sbjct: 69 ----------DPRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGE 118
Query: 204 SITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGA 263
+ TS Y++G TED R + +L +P PL+A+G S+G N+L YLGEEG+ P+ A
Sbjct: 119 ANTSPRLYHSGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAA 178
Query: 264 AAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLA---NWEGIKKSR 320
A+ +P+DL + ++Y R L L+ A IK+ R
Sbjct: 179 VAVSAPFDLEACAYRLDSGFSLRLYSRYLLRNLKRNAARKLKELEPSLPGTVLAAIKRCR 238
Query: 321 SIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDEC 380
+IR+FD T + F + YYR SS + + P L I++ DDP E IP +
Sbjct: 239 TIREFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQE 298
Query: 381 RANKNVVLATTWHGGHLAFFEGLTA-AGMWWVRAVNEYLG 419
N NV+L T HGGH+ F G MW + + ++L
Sbjct: 299 MLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLD 338
|
Length = 345 |
| >gnl|CDD|182883 PRK10985, PRK10985, putative hydrolase; Provisional | Back alignment and domain information |
|---|
Score = 135 bits (341), Expect = 3e-35
Identities = 99/343 (28%), Positives = 142/343 (41%), Gaps = 41/343 (11%)
Query: 97 PWLSSPHIQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISK 156
S+PH+QT R F+ Q L DG + L W S P H
Sbjct: 8 RGASNPHLQTLLPRLIRRKVLFTPYWQRLELPDGDFVDLAW---SEDPAQARH------- 57
Query: 157 DDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWT 216
P ++ GL + Y L+ KRGW VV + RG G Y++G T
Sbjct: 58 ---KPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSGET 114
Query: 217 EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGD 276
EDAR + +L E+ P A+G S+G N+L L +EG+ P+ A + +P L
Sbjct: 115 EDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLML---- 170
Query: 277 RFIGRRLIQ---KIYDRALTIGLQDYAQLHEPRYSRLANWEG--------IKKSRSIRDF 325
R+ Q ++Y R L L+ A +LA + G +K R +R+F
Sbjct: 171 EACSYRMEQGFSRVYQRYLLNLLKANAA------RKLAAYPGTLPINLAQLKSVRRLREF 224
Query: 326 DSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKN 385
D T + F YYR CS+ + + P L I + DDP T E IP N
Sbjct: 225 DDLITARIHGFADAIDYYRQCSALPLLNQIRKPTLIIHAKDDPFMTHEVIP-KPESLPPN 283
Query: 386 VVLATTWHGGHLAFFEG-LTAAGMWWVRAVNEYLGVLHSSPYM 427
V T HGGH+ F G L MW + + ++L + Y+
Sbjct: 284 VEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWL-----TTYL 321
|
Length = 324 |
| >gnl|CDD|201306 pfam00561, Abhydrolase_1, alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Score = 57.9 bits (140), Expect = 2e-09
Identities = 41/225 (18%), Positives = 72/225 (32%), Gaps = 21/225 (9%)
Query: 190 WNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVK 249
++V+ + RG G S D +D E + L + +G S+G I +
Sbjct: 1 FDVIAFDLRGFGRSSPPKDFADYR--FDDLAEDLEALLDALGLDKVNLVGHSMGGLIALA 58
Query: 250 YLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKI------------YDRALTIGLQ 297
Y + ++ V + + + R + + + L ++
Sbjct: 59 YAAKYPDR--VKALVLVGTVHPAGLSSPLTPRGNLLGLLLDNFFNRLYDSVEALLGRAIK 116
Query: 298 DYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSI 357
+ L P S + S IR ++ A G Y S + ++ +
Sbjct: 117 QFQALGRPFVSDFLKQF--ELSSLIRFGETLALD--GLLGYALGYDLVWDRSAALKDIDV 172
Query: 358 PLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEG 402
P L I DDP+ +A N L GHLA E
Sbjct: 173 PTLIIWGDDDPLVPPDAS-EKLAALFPNAQLVVIDDAGHLAQLEK 216
|
This catalytic domain is found in a very wide range of enzymes. Length = 226 |
| >gnl|CDD|225176 COG2267, PldB, Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 45.8 bits (109), Expect = 3e-05
Identities = 48/253 (18%), Positives = 86/253 (33%), Gaps = 30/253 (11%)
Query: 164 IVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSIT----SDCFYNAGWTEDA 219
+++ GL + + Y L + A RG++V + RG G D F + + +D
Sbjct: 38 VLVHGLG-EHSGRY-EELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFAD--YVDDL 93
Query: 220 REVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFI 279
+ + P P+F +G S+G I + YL + G + SP L G
Sbjct: 94 DAFVETIAEPDPGLPVFLLGHSMGGLIALLYL--ARYPPRIDG-LVLSSPALGLGGA--- 147
Query: 280 GRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRS-----IRDFDSHATCLVG 334
L + AL + + +L + S + +++ VG
Sbjct: 148 --ILRLILARLALKLLGRIRPKL---PVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVG 202
Query: 335 K--FETVDTYYRNCSSST--YVGNVSIPLLCISSLDDP-VCTVEAI-PWDECRANKNVVL 388
VD +++P+L + DD V VE + + E + + L
Sbjct: 203 GPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKEL 262
Query: 389 ATTWHGGHLAFFE 401
H E
Sbjct: 263 KVIPGAYHELLNE 275
|
Length = 298 |
| >gnl|CDD|223669 COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 43.8 bits (102), Expect = 1e-04
Identities = 38/258 (14%), Positives = 73/258 (28%), Gaps = 20/258 (7%)
Query: 156 KDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGW 215
P +++ G S+ V + V+ + RG G + + +
Sbjct: 17 AGGGGPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGR--SDPAGYSLSAY 74
Query: 216 TEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLI- 274
+D ++ K L +G S+G + + ++ V G I +
Sbjct: 75 ADDLAALLD--ALGLEKVVL--VGHSMGGAVALALALRHPDR--VRGLVLIGPAPPPGLL 128
Query: 275 ---GDRFIGRRLIQKIYDRALTIGLQDYAQL--HEPRYSRLANWEGIKKSRSIRDFDSHA 329
+ G + + D L + +A L + LA + ++R A
Sbjct: 129 EAALRQPAGAAPLAALADLLLGLDAAAFAALLAALGLLAALAAAARAGLAEALRAPLLGA 188
Query: 330 TCLVGKFETVDTYYRNCSS------STYVGNVSIPLLCISSLDDPVCTVEAIPWDECRAN 383
+ + +++P L I DDPV E
Sbjct: 189 AAAAFARAARADLAAALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELARRLAAALP 248
Query: 384 KNVVLATTWHGGHLAFFE 401
+ L GH E
Sbjct: 249 NDARLVVIPGAGHFPHLE 266
|
Length = 282 |
| >gnl|CDD|221720 pfam12697, Abhydrolase_6, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 1e-04
Identities = 37/240 (15%), Positives = 62/240 (25%), Gaps = 64/240 (26%)
Query: 164 IVIPGLTSDSA--ASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDARE 221
+++ G + L G+ V+ + G G Y+ +DA +
Sbjct: 2 VLLHGAGGSAESWRPLAEAL-----AAGYRVLAPDLPGHGDSDGPPRTPYS--LEDDAAD 54
Query: 222 VIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGR 281
+ L P+ +G S+G + + E+ VAG I P
Sbjct: 55 LAALLDA-LGLGPVVLVGHSLGGAVALAAAARRPER--VAGLVLISPPLRD--------- 102
Query: 282 RLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDT 341
+ L L E + +
Sbjct: 103 ------LEELLAADAAALLALLRAALLDADLREALAR----------------------- 133
Query: 342 YYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFE 401
+++P+L I DDP+ EA A L GHL E
Sbjct: 134 -------------LTVPVLVIHGEDDPLVPPEAARR-LAEALPGAELVVLPGAGHLPHLE 179
|
This family contains alpha/beta hydrolase enzymes of diverse specificity. Length = 187 |
| >gnl|CDD|225496 COG2945, COG2945, Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 8e-04
Identities = 35/156 (22%), Positives = 52/156 (33%), Gaps = 26/156 (16%)
Query: 142 TGPGDVFHANNFISKDDTTPIAIVIP-----GLTSDSAASYIRHLVFNTAKRGWNVVVSN 196
GP +K PIA++ G T ++ KRG+ + N
Sbjct: 10 NGPAGRLEGRYEPAKTPAAPIALICHPHPLFGGTMNNKVVQTLARAL--VKRGFATLRFN 67
Query: 197 HRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAI-GTSIGANI---LVKYLG 252
RG+G D G EDA + +L +P + + G S GA I L
Sbjct: 68 FRGVGRSQGEFD--NGIGELEDAAAALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRRP 125
Query: 253 EEGEKTPVAGAAAI----------C-SPWDLLIGDR 277
E ++ I C SP ++ GD
Sbjct: 126 EIL--VFISILPPINAYDFSFLAPCPSPGLVIQGDA 159
|
Length = 210 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 578 | |||
| KOG1838 | 409 | consensus Alpha/beta hydrolase [General function p | 100.0 | |
| COG0429 | 345 | Predicted hydrolase of the alpha/beta-hydrolase fo | 100.0 | |
| PLN02511 | 388 | hydrolase | 100.0 | |
| PRK10985 | 324 | putative hydrolase; Provisional | 100.0 | |
| PLN02298 | 330 | hydrolase, alpha/beta fold family protein | 99.93 | |
| PHA02857 | 276 | monoglyceride lipase; Provisional | 99.92 | |
| PLN02385 | 349 | hydrolase; alpha/beta fold family protein | 99.92 | |
| COG2267 | 298 | PldB Lysophospholipase [Lipid metabolism] | 99.9 | |
| PRK10749 | 330 | lysophospholipase L2; Provisional | 99.89 | |
| TIGR02240 | 276 | PHA_depoly_arom poly(3-hydroxyalkanoate) depolymer | 99.89 | |
| PLN02652 | 395 | hydrolase; alpha/beta fold family protein | 99.88 | |
| PRK00870 | 302 | haloalkane dehalogenase; Provisional | 99.88 | |
| PLN02824 | 294 | hydrolase, alpha/beta fold family protein | 99.88 | |
| PRK03592 | 295 | haloalkane dehalogenase; Provisional | 99.88 | |
| KOG1455 | 313 | consensus Lysophospholipase [Lipid transport and m | 99.88 | |
| TIGR03343 | 282 | biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-die | 99.86 | |
| TIGR01607 | 332 | PST-A Plasmodium subtelomeric family (PST-A). Thes | 99.86 | |
| TIGR01738 | 245 | bioH putative pimeloyl-BioC--CoA transferase BioH. | 99.86 | |
| COG1647 | 243 | Esterase/lipase [General function prediction only] | 99.86 | |
| TIGR03611 | 257 | RutD pyrimidine utilization protein D. This protei | 99.86 | |
| TIGR02427 | 251 | protocat_pcaD 3-oxoadipate enol-lactonase. Members | 99.86 | |
| PLN02679 | 360 | hydrolase, alpha/beta fold family protein | 99.85 | |
| PRK13604 | 307 | luxD acyl transferase; Provisional | 99.85 | |
| TIGR03056 | 278 | bchO_mg_che_rel putative magnesium chelatase acces | 99.85 | |
| TIGR03695 | 251 | menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene | 99.84 | |
| PRK10349 | 256 | carboxylesterase BioH; Provisional | 99.84 | |
| PLN02872 | 395 | triacylglycerol lipase | 99.84 | |
| TIGR01250 | 288 | pro_imino_pep_2 proline-specific peptidases, Bacil | 99.84 | |
| PRK10673 | 255 | acyl-CoA esterase; Provisional | 99.84 | |
| PLN02965 | 255 | Probable pheophorbidase | 99.84 | |
| PRK11126 | 242 | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl | 99.84 | |
| PLN03087 | 481 | BODYGUARD 1 domain containing hydrolase; Provision | 99.84 | |
| PF12697 | 228 | Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3 | 99.84 | |
| PLN02578 | 354 | hydrolase | 99.84 | |
| KOG4178 | 322 | consensus Soluble epoxide hydrolase [Lipid transpo | 99.83 | |
| PRK06489 | 360 | hypothetical protein; Provisional | 99.83 | |
| PRK03204 | 286 | haloalkane dehalogenase; Provisional | 99.83 | |
| PRK07581 | 339 | hypothetical protein; Validated | 99.83 | |
| TIGR01249 | 306 | pro_imino_pep_1 proline iminopeptidase, Neisseria- | 99.81 | |
| PLN02894 | 402 | hydrolase, alpha/beta fold family protein | 99.81 | |
| PRK05077 | 414 | frsA fermentation/respiration switch protein; Revi | 99.81 | |
| KOG4409 | 365 | consensus Predicted hydrolase/acyltransferase (alp | 99.8 | |
| KOG4391 | 300 | consensus Predicted alpha/beta hydrolase BEM46 [Ge | 99.79 | |
| KOG1454 | 326 | consensus Predicted hydrolase/acyltransferase (alp | 99.79 | |
| PRK08775 | 343 | homoserine O-acetyltransferase; Provisional | 99.79 | |
| TIGR03100 | 274 | hydr1_PEP hydrolase, ortholog 1, exosortase system | 99.78 | |
| PLN03084 | 383 | alpha/beta hydrolase fold protein; Provisional | 99.78 | |
| TIGR01392 | 351 | homoserO_Ac_trn homoserine O-acetyltransferase. Th | 99.78 | |
| PRK14875 | 371 | acetoin dehydrogenase E2 subunit dihydrolipoyllysi | 99.77 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.76 | |
| PRK00175 | 379 | metX homoserine O-acetyltransferase; Provisional | 99.76 | |
| PLN02211 | 273 | methyl indole-3-acetate methyltransferase | 99.75 | |
| TIGR01836 | 350 | PHA_synth_III_C poly(R)-hydroxyalkanoic acid synth | 99.72 | |
| PRK10566 | 249 | esterase; Provisional | 99.71 | |
| PF00561 | 230 | Abhydrolase_1: alpha/beta hydrolase fold A web pag | 99.7 | |
| KOG1552 | 258 | consensus Predicted alpha/beta hydrolase [General | 99.7 | |
| PLN02980 | 1655 | 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi | 99.68 | |
| PF12695 | 145 | Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3 | 99.67 | |
| KOG2382 | 315 | consensus Predicted alpha/beta hydrolase [General | 99.67 | |
| KOG2984 | 277 | consensus Predicted hydrolase [General function pr | 99.64 | |
| TIGR00976 | 550 | /NonD putative hydrolase, CocE/NonD family. This m | 99.63 | |
| PRK06765 | 389 | homoserine O-acetyltransferase; Provisional | 99.63 | |
| PRK11071 | 190 | esterase YqiA; Provisional | 99.62 | |
| TIGR03101 | 266 | hydr2_PEP hydrolase, ortholog 2, exosortase system | 99.61 | |
| COG1506 | 620 | DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept | 99.6 | |
| PF00326 | 213 | Peptidase_S9: Prolyl oligopeptidase family This fa | 99.6 | |
| TIGR01838 | 532 | PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, | 99.58 | |
| PF06500 | 411 | DUF1100: Alpha/beta hydrolase of unknown function | 99.56 | |
| PRK07868 | 994 | acyl-CoA synthetase; Validated | 99.55 | |
| PLN00021 | 313 | chlorophyllase | 99.53 | |
| COG2945 | 210 | Predicted hydrolase of the alpha/beta superfamily | 99.51 | |
| PLN02442 | 283 | S-formylglutathione hydrolase | 99.51 | |
| KOG2624 | 403 | consensus Triglyceride lipase-cholesterol esterase | 99.51 | |
| KOG2564 | 343 | consensus Predicted acetyltransferases and hydrola | 99.5 | |
| KOG4667 | 269 | consensus Predicted esterase [Lipid transport and | 99.49 | |
| PRK11460 | 232 | putative hydrolase; Provisional | 99.47 | |
| TIGR02821 | 275 | fghA_ester_D S-formylglutathione hydrolase. This m | 99.46 | |
| PRK10115 | 686 | protease 2; Provisional | 99.44 | |
| TIGR01840 | 212 | esterase_phb esterase, PHB depolymerase family. Th | 99.42 | |
| COG0596 | 282 | MhpC Predicted hydrolases or acyltransferases (alp | 99.41 | |
| COG4757 | 281 | Predicted alpha/beta hydrolase [General function p | 99.4 | |
| PF02129 | 272 | Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 fam | 99.4 | |
| PRK10162 | 318 | acetyl esterase; Provisional | 99.38 | |
| PF05448 | 320 | AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR0 | 99.38 | |
| PF01738 | 218 | DLH: Dienelactone hydrolase family; InterPro: IPR0 | 99.31 | |
| PF08538 | 303 | DUF1749: Protein of unknown function (DUF1749); In | 99.27 | |
| TIGR01839 | 560 | PHA_synth_II poly(R)-hydroxyalkanoic acid synthase | 99.27 | |
| PF02230 | 216 | Abhydrolase_2: Phospholipase/Carboxylesterase; Int | 99.26 | |
| COG0412 | 236 | Dienelactone hydrolase and related enzymes [Second | 99.26 | |
| TIGR01849 | 406 | PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, | 99.25 | |
| TIGR03230 | 442 | lipo_lipase lipoprotein lipase. Members of this pr | 99.23 | |
| COG3458 | 321 | Acetyl esterase (deacetylase) [Secondary metabolit | 99.22 | |
| cd00707 | 275 | Pancreat_lipase_like Pancreatic lipase-like enzyme | 99.21 | |
| PF06342 | 297 | DUF1057: Alpha/beta hydrolase of unknown function | 99.18 | |
| PRK05371 | 767 | x-prolyl-dipeptidyl aminopeptidase; Provisional | 99.15 | |
| PF06821 | 171 | Ser_hydrolase: Serine hydrolase; InterPro: IPR0106 | 99.14 | |
| COG2021 | 368 | MET2 Homoserine acetyltransferase [Amino acid tran | 99.14 | |
| COG2936 | 563 | Predicted acyl esterases [General function predict | 99.12 | |
| PF02273 | 294 | Acyl_transf_2: Acyl transferase; InterPro: IPR0031 | 99.08 | |
| COG3571 | 213 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.02 | |
| PF07859 | 211 | Abhydrolase_3: alpha/beta hydrolase fold A web pag | 98.98 | |
| PF12740 | 259 | Chlorophyllase2: Chlorophyllase enzyme; InterPro: | 98.96 | |
| COG0657 | 312 | Aes Esterase/lipase [Lipid metabolism] | 98.96 | |
| TIGR03502 | 792 | lipase_Pla1_cef extracellular lipase, Pla-1/cef fa | 98.95 | |
| PF12146 | 79 | Hydrolase_4: Putative lysophospholipase; InterPro: | 98.95 | |
| KOG2931 | 326 | consensus Differentiation-related gene 1 protein ( | 98.95 | |
| COG0400 | 207 | Predicted esterase [General function prediction on | 98.89 | |
| PF00975 | 229 | Thioesterase: Thioesterase domain; InterPro: IPR00 | 98.85 | |
| PF09752 | 348 | DUF2048: Uncharacterized conserved protein (DUF204 | 98.84 | |
| KOG3043 | 242 | consensus Predicted hydrolase related to dienelact | 98.83 | |
| PF10230 | 266 | DUF2305: Uncharacterised conserved protein (DUF230 | 98.83 | |
| COG3208 | 244 | GrsT Predicted thioesterase involved in non-riboso | 98.81 | |
| COG4188 | 365 | Predicted dienelactone hydrolase [General function | 98.8 | |
| PF05728 | 187 | UPF0227: Uncharacterised protein family (UPF0227); | 98.78 | |
| KOG2100 | 755 | consensus Dipeptidyl aminopeptidase [Posttranslati | 98.75 | |
| PF12715 | 390 | Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8 | 98.75 | |
| KOG1515 | 336 | consensus Arylacetamide deacetylase [Defense mecha | 98.74 | |
| PF03583 | 290 | LIP: Secretory lipase ; InterPro: IPR005152 This e | 98.73 | |
| COG3243 | 445 | PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid me | 98.71 | |
| PF06028 | 255 | DUF915: Alpha/beta hydrolase of unknown function ( | 98.7 | |
| PF10503 | 220 | Esterase_phd: Esterase PHB depolymerase | 98.69 | |
| PF03096 | 283 | Ndr: Ndr family; InterPro: IPR004142 This family c | 98.69 | |
| PF07819 | 225 | PGAP1: PGAP1-like protein; InterPro: IPR012908 The | 98.68 | |
| COG3545 | 181 | Predicted esterase of the alpha/beta hydrolase fol | 98.6 | |
| KOG2281 | 867 | consensus Dipeptidyl aminopeptidases/acylaminoacyl | 98.6 | |
| KOG4627 | 270 | consensus Kynurenine formamidase [Amino acid trans | 98.57 | |
| PF03403 | 379 | PAF-AH_p_II: Platelet-activating factor acetylhydr | 98.54 | |
| PF05677 | 365 | DUF818: Chlamydia CHLPS protein (DUF818); InterPro | 98.53 | |
| PF06057 | 192 | VirJ: Bacterial virulence protein (VirJ); InterPro | 98.46 | |
| PF01674 | 219 | Lipase_2: Lipase (class 2); InterPro: IPR002918 Li | 98.44 | |
| COG4099 | 387 | Predicted peptidase [General function prediction o | 98.4 | |
| PLN02733 | 440 | phosphatidylcholine-sterol O-acyltransferase | 98.36 | |
| PF07224 | 307 | Chlorophyllase: Chlorophyllase; InterPro: IPR01082 | 98.34 | |
| PF00151 | 331 | Lipase: Lipase; InterPro: IPR013818 Triglyceride l | 98.3 | |
| PF08840 | 213 | BAAT_C: BAAT / Acyl-CoA thioester hydrolase C term | 98.27 | |
| PF05705 | 240 | DUF829: Eukaryotic protein of unknown function (DU | 98.23 | |
| KOG1553 | 517 | consensus Predicted alpha/beta hydrolase BAT5 [Gen | 98.19 | |
| PF05990 | 233 | DUF900: Alpha/beta hydrolase of unknown function ( | 98.19 | |
| PF03959 | 212 | FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 | 98.16 | |
| KOG2237 | 712 | consensus Predicted serine protease [Posttranslati | 98.14 | |
| COG3509 | 312 | LpqC Poly(3-hydroxybutyrate) depolymerase [Seconda | 98.14 | |
| PF11339 | 581 | DUF3141: Protein of unknown function (DUF3141); In | 98.12 | |
| COG1770 | 682 | PtrB Protease II [Amino acid transport and metabol | 98.12 | |
| KOG3847 | 399 | consensus Phospholipase A2 (platelet-activating fa | 98.11 | |
| KOG3253 | 784 | consensus Predicted alpha/beta hydrolase [General | 98.08 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 98.02 | |
| KOG2551 | 230 | consensus Phospholipase/carboxyhydrolase [Amino ac | 97.99 | |
| COG4814 | 288 | Uncharacterized protein with an alpha/beta hydrola | 97.96 | |
| PF00756 | 251 | Esterase: Putative esterase; InterPro: IPR000801 T | 97.91 | |
| PRK04940 | 180 | hypothetical protein; Provisional | 97.89 | |
| COG3319 | 257 | Thioesterase domains of type I polyketide synthase | 97.88 | |
| KOG4840 | 299 | consensus Predicted hydrolases or acyltransferases | 97.88 | |
| PF12048 | 310 | DUF3530: Protein of unknown function (DUF3530); In | 97.84 | |
| PF05057 | 217 | DUF676: Putative serine esterase (DUF676); InterPr | 97.82 | |
| KOG2565 | 469 | consensus Predicted hydrolases or acyltransferases | 97.81 | |
| cd00312 | 493 | Esterase_lipase Esterases and lipases (includes fu | 97.76 | |
| smart00824 | 212 | PKS_TE Thioesterase. Peptide synthetases are invol | 97.72 | |
| KOG1551 | 371 | consensus Uncharacterized conserved protein [Funct | 97.7 | |
| KOG2112 | 206 | consensus Lysophospholipase [Lipid transport and m | 97.61 | |
| KOG3101 | 283 | consensus Esterase D [General function prediction | 97.58 | |
| COG1505 | 648 | Serine proteases of the peptidase family S9A [Amin | 97.54 | |
| PTZ00472 | 462 | serine carboxypeptidase (CBP1); Provisional | 97.52 | |
| COG4782 | 377 | Uncharacterized protein conserved in bacteria [Fun | 97.49 | |
| PRK10439 | 411 | enterobactin/ferric enterobactin esterase; Provisi | 97.45 | |
| KOG3975 | 301 | consensus Uncharacterized conserved protein [Funct | 97.43 | |
| PLN02606 | 306 | palmitoyl-protein thioesterase | 97.42 | |
| PF05577 | 434 | Peptidase_S28: Serine carboxypeptidase S28; InterP | 97.38 | |
| COG1075 | 336 | LipA Predicted acetyltransferases and hydrolases w | 97.37 | |
| COG1073 | 299 | Hydrolases of the alpha/beta superfamily [General | 97.23 | |
| PF00135 | 535 | COesterase: Carboxylesterase family The prints ent | 97.13 | |
| COG2272 | 491 | PnbA Carboxylesterase type B [Lipid metabolism] | 97.08 | |
| PF02450 | 389 | LCAT: Lecithin:cholesterol acyltransferase; InterP | 96.98 | |
| KOG3967 | 297 | consensus Uncharacterized conserved protein [Funct | 96.98 | |
| PF04301 | 213 | DUF452: Protein of unknown function (DUF452); Inte | 96.93 | |
| PF10340 | 374 | DUF2424: Protein of unknown function (DUF2424); In | 96.87 | |
| KOG3724 | 973 | consensus Negative regulator of COPII vesicle form | 96.79 | |
| PF11144 | 403 | DUF2920: Protein of unknown function (DUF2920); In | 96.57 | |
| PLN02633 | 314 | palmitoyl protein thioesterase family protein | 96.56 | |
| cd00741 | 153 | Lipase Lipase. Lipases are esterases that can hydr | 96.48 | |
| PF10142 | 367 | PhoPQ_related: PhoPQ-activated pathogenicity-relat | 96.22 | |
| PF04083 | 63 | Abhydro_lipase: Partial alpha/beta-hydrolase lipas | 96.16 | |
| PLN02517 | 642 | phosphatidylcholine-sterol O-acyltransferase | 96.06 | |
| PF01764 | 140 | Lipase_3: Lipase (class 3); InterPro: IPR002921 Tr | 96.02 | |
| KOG2541 | 296 | consensus Palmitoyl protein thioesterase [Lipid tr | 95.96 | |
| PF07082 | 250 | DUF1350: Protein of unknown function (DUF1350); In | 95.91 | |
| COG2382 | 299 | Fes Enterochelin esterase and related enzymes [Ino | 95.72 | |
| cd00519 | 229 | Lipase_3 Lipase (class 3). Lipases are esterases t | 95.65 | |
| COG0627 | 316 | Predicted esterase [General function prediction on | 95.58 | |
| PF08386 | 103 | Abhydrolase_4: TAP-like protein; InterPro: IPR0135 | 95.57 | |
| COG3150 | 191 | Predicted esterase [General function prediction on | 95.55 | |
| PF00450 | 415 | Peptidase_S10: Serine carboxypeptidase; InterPro: | 95.49 | |
| PF06259 | 177 | Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR | 95.49 | |
| KOG2183 | 492 | consensus Prolylcarboxypeptidase (angiotensinase C | 95.48 | |
| COG2819 | 264 | Predicted hydrolase of the alpha/beta superfamily | 95.34 | |
| KOG2369 | 473 | consensus Lecithin:cholesterol acyltransferase (LC | 95.3 | |
| PF01083 | 179 | Cutinase: Cutinase; InterPro: IPR000675 Aerial pla | 95.08 | |
| PF11187 | 224 | DUF2974: Protein of unknown function (DUF2974); In | 94.83 | |
| PF02089 | 279 | Palm_thioest: Palmitoyl protein thioesterase; Inte | 94.64 | |
| PLN02454 | 414 | triacylglycerol lipase | 94.09 | |
| KOG2182 | 514 | consensus Hydrolytic enzymes of the alpha/beta hyd | 93.93 | |
| PLN02162 | 475 | triacylglycerol lipase | 93.87 | |
| PLN00413 | 479 | triacylglycerol lipase | 93.84 | |
| COG3946 | 456 | VirJ Type IV secretory pathway, VirJ component [In | 93.81 | |
| COG4553 | 415 | DepA Poly-beta-hydroxyalkanoate depolymerase [Lipi | 93.57 | |
| COG5153 | 425 | CVT17 Putative lipase essential for disintegration | 93.18 | |
| KOG4540 | 425 | consensus Putative lipase essential for disintegra | 93.18 | |
| PLN02934 | 515 | triacylglycerol lipase | 92.98 | |
| PF11288 | 207 | DUF3089: Protein of unknown function (DUF3089); In | 92.91 | |
| PLN03016 | 433 | sinapoylglucose-malate O-sinapoyltransferase | 92.63 | |
| PLN02571 | 413 | triacylglycerol lipase | 91.68 | |
| PF05576 | 448 | Peptidase_S37: PS-10 peptidase S37; InterPro: IPR0 | 91.63 | |
| PLN02408 | 365 | phospholipase A1 | 91.63 | |
| PLN02209 | 437 | serine carboxypeptidase | 91.56 | |
| KOG2521 | 350 | consensus Uncharacterized conserved protein [Funct | 91.41 | |
| KOG4372 | 405 | consensus Predicted alpha/beta hydrolase [General | 91.31 | |
| KOG4569 | 336 | consensus Predicted lipase [Lipid transport and me | 90.36 | |
| PLN02847 | 633 | triacylglycerol lipase | 90.14 | |
| KOG1516 | 545 | consensus Carboxylesterase and related proteins [G | 90.05 | |
| PLN02324 | 415 | triacylglycerol lipase | 89.96 | |
| PLN02719 | 518 | triacylglycerol lipase | 89.05 | |
| PLN02802 | 509 | triacylglycerol lipase | 88.71 | |
| PLN02761 | 527 | lipase class 3 family protein | 87.8 | |
| COG2939 | 498 | Carboxypeptidase C (cathepsin A) [Amino acid trans | 87.74 | |
| PLN02753 | 531 | triacylglycerol lipase | 87.72 | |
| PLN02310 | 405 | triacylglycerol lipase | 87.56 | |
| PLN03037 | 525 | lipase class 3 family protein; Provisional | 86.21 | |
| COG4947 | 227 | Uncharacterized protein conserved in bacteria [Fun | 85.64 | |
| KOG1282 | 454 | consensus Serine carboxypeptidases (lysosomal cath | 83.94 | |
| PF05277 | 345 | DUF726: Protein of unknown function (DUF726); Inte | 83.76 | |
| PF08237 | 225 | PE-PPE: PE-PPE domain; InterPro: IPR013228 The hum | 83.72 |
| >KOG1838 consensus Alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-68 Score=547.44 Aligned_cols=393 Identities=42% Similarity=0.744 Sum_probs=354.2
Q ss_pred HHHHHHhccchhHHHHHHHHHHHHhheeeeeeeeccccccccCCCCcEEEeCCCchhhHHHhhccccccCCcccCCCCCc
Q 008093 22 LLFNALRLIPISHYVLALSLLFVIVIYNFLEFHFVEDLFSGFRGSPVRLTFNSSSPIYDGVVSKCKIVHGRYLVTPWLSS 101 (578)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~cp~l~~~y~P~~wl~~ 101 (578)
++++.....++..+++.+++.+..++|.+.++++. .+++.+++. +++|.++++++||.|+++|.|++|+++
T Consensus 4 l~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~--------~~~~~l~~~-~~~f~~~l~~~~~~l~~~y~p~~w~~~ 74 (409)
T KOG1838|consen 4 LLFQSLLGPVLSPVLLGLLIGVAVVLYAFLYLKSP--------PRKPSLFCG-DSGFARFLVPKCPLLEEKYLPTLWLFS 74 (409)
T ss_pred ccccccccccccHHHHHHhhhhheeeeecceeecc--------CCCCeeecC-chHHHHHHHhhccccccccccceeecC
Confidence 45555556667777777777778888999998862 455656555 689999999999999999999999999
Q ss_pred hhHHHhhhhhhcCCCCCCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHH
Q 008093 102 PHIQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHL 181 (578)
Q Consensus 102 ghlQT~~~~~~~~~~~~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l 181 (578)
||+||++..+++++|.+.|+|++++++|||++++||+.+++... ...+.+.|+||++||++|+|.+.|++++
T Consensus 75 ghlQT~~~~~~~~~p~~~y~Reii~~~DGG~~~lDW~~~~~~~~--------~~~~~~~P~vvilpGltg~S~~~YVr~l 146 (409)
T KOG1838|consen 75 GHLQTLLLSFFGSKPPVEYTREIIKTSDGGTVTLDWVENPDSRC--------RTDDGTDPIVVILPGLTGGSHESYVRHL 146 (409)
T ss_pred CeeeeeehhhcCCCCCCcceeEEEEeCCCCEEEEeeccCccccc--------CCCCCCCcEEEEecCCCCCChhHHHHHH
Confidence 99999999999999999999999999999999999998765310 0223577999999999999999999999
Q ss_pred HHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCcc
Q 008093 182 VFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVA 261 (578)
Q Consensus 182 ~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~ 261 (578)
+..++++||+|+++|.||||+++.+++++|+++|++|+.++++|++++||.+|++++|+||||+++++|++|.++++++.
T Consensus 147 v~~a~~~G~r~VVfN~RG~~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~ 226 (409)
T KOG1838|consen 147 VHEAQRKGYRVVVFNHRGLGGSKLTTPRLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLI 226 (409)
T ss_pred HHHHHhCCcEEEEECCCCCCCCccCCCceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcc-cccccCCHHHHhccCCHHHHHhhhhhccCCCCCHH
Q 008093 262 GAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEP-RYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVD 340 (578)
Q Consensus 262 ~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~-~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~ 340 (578)
+++++|.|||.......+.+...+++|++.++.++++++..+.+ .+....+++.+.+.++++|||+.++++.+||++++
T Consensus 227 ~a~~v~~Pwd~~~~~~~~~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~d 306 (409)
T KOG1838|consen 227 AAVAVCNPWDLLAASRSIETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSVD 306 (409)
T ss_pred eEEEEeccchhhhhhhHHhcccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcHH
Confidence 99999999999888888888889999999999999999998888 56667889999999999999999999999999999
Q ss_pred HHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcc-cHHHHHHHHHH
Q 008093 341 TYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGM-WWVRAVNEYLG 419 (578)
Q Consensus 341 ~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~-w~~~~v~eFL~ 419 (578)
+||+.+|+.+++++|++|+|+|++.|||++|.+.++...+..+|++.++++.+|||+||+||+.|... |+.+.+.+|+.
T Consensus 307 eYY~~aSs~~~v~~I~VP~L~ina~DDPv~p~~~ip~~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~ 386 (409)
T KOG1838|consen 307 EYYKKASSSNYVDKIKVPLLCINAADDPVVPEEAIPIDDIKSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLG 386 (409)
T ss_pred HHHhhcchhhhcccccccEEEEecCCCCCCCcccCCHHHHhcCCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999777654 55565999999
Q ss_pred hhcCCCcccccc
Q 008093 420 VLHSSPYMHVRK 431 (578)
Q Consensus 420 ~~~~~~~~~~~~ 431 (578)
.+......++.+
T Consensus 387 ~~~~~~~~~~~~ 398 (409)
T KOG1838|consen 387 NAIFQDEVGRHR 398 (409)
T ss_pred HHHhhhcccccC
Confidence 987665554443
|
|
| >COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-54 Score=425.79 Aligned_cols=318 Identities=33% Similarity=0.557 Sum_probs=289.3
Q ss_pred Cccc-CCCCCchhHHHhhh--hhhcCCCCCCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECC
Q 008093 92 RYLV-TPWLSSPHIQTAFL--HFFGRPPCFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPG 168 (578)
Q Consensus 92 ~y~P-~~wl~~ghlQT~~~--~~~~~~~~~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHG 168 (578)
+|.| ++|++|||+||++. ..+++.+.+.|+||.+.++||+.+.+||..++. +..+|.||++||
T Consensus 18 ~f~p~~~~L~ng~lqTl~~~~~~frr~~~~~~~re~v~~pdg~~~~ldw~~~p~--------------~~~~P~vVl~HG 83 (345)
T COG0429 18 PFDPLPWGLFNGHLQTLYPSLRLFRRKPKVAYTRERLETPDGGFIDLDWSEDPR--------------AAKKPLVVLFHG 83 (345)
T ss_pred cCCCCcccccCcchhhhhhhHHHhhcccccccceEEEEcCCCCEEEEeeccCcc--------------ccCCceEEEEec
Confidence 5777 78899999999998 567888999999999999999999999998644 466799999999
Q ss_pred CCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHH
Q 008093 169 LTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILV 248 (578)
Q Consensus 169 l~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial 248 (578)
++|++.+.|++.+++.+.++||.+|++|.|||+++..+.+++|+.++++|+..++++++++++..|+.+||+||||++++
T Consensus 84 L~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa 163 (345)
T COG0429 84 LEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYHSGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLA 163 (345)
T ss_pred cCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceecccchhHHHHHHHHHHHhCCCCceEEEEecccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccc-c-CC-HHHHhccCCHHHH
Q 008093 249 KYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSR-L-AN-WEGIKKSRSIRDF 325 (578)
Q Consensus 249 ~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~-~-~d-~~~i~~~~s~~ef 325 (578)
+|+++.++++++.+++.+|.|+|+..+...+...+..++|.+.+...|++++..+...+.. . .+ .+.+++.+++++|
T Consensus 164 ~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r~l~~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eF 243 (345)
T COG0429 164 NYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRLYSRYLLRNLKRNAARKLKELEPSLPGTVLAAIKRCRTIREF 243 (345)
T ss_pred HHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHHHHHHHhcCcccCcHHHHHHHhhchHHhc
Confidence 9999999999999999999999999888888877655899999999999888877666622 1 22 4678889999999
Q ss_pred HhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCcccccccccc
Q 008093 326 DSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTA 405 (578)
Q Consensus 326 d~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~ 405 (578)
|+.+|.+.+||.++++||+.+|+.+.+++|++|+|+||+.|||+++++.+|......++++.+.++++|||+||+.+...
T Consensus 244 D~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~ 323 (345)
T COG0429 244 DDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLL 323 (345)
T ss_pred cceeeecccCCCcHHHHHHhccccccccccccceEEEecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEeccCccc
Confidence 99999999999999999999999999999999999999999999999999987666999999999999999999997332
Q ss_pred Cc-ccHHHHHHHHHHhhcC
Q 008093 406 AG-MWWVRAVNEYLGVLHS 423 (578)
Q Consensus 406 ~~-~w~~~~v~eFL~~~~~ 423 (578)
+. .|..+++.+|++.+.+
T Consensus 324 ~~~~W~~~ri~~~l~~~~~ 342 (345)
T COG0429 324 HPQMWLEQRILDWLDPFLE 342 (345)
T ss_pred cchhhHHHHHHHHHHHHHh
Confidence 33 3999999999998754
|
|
| >PLN02511 hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-50 Score=431.51 Aligned_cols=345 Identities=37% Similarity=0.661 Sum_probs=286.7
Q ss_pred cEEEeCCCchhhHHHhhccccccCCcccCCCCCchhHHHhhhhhhcCCCCCCeeEEEEEecCCcEEEEEEecCCCCCCCc
Q 008093 68 VRLTFNSSSPIYDGVVSKCKIVHGRYLVTPWLSSPHIQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDWLMGSTGPGDV 147 (578)
Q Consensus 68 ~~l~~~~~~~~~~~~~~~cp~l~~~y~P~~wl~~ghlQT~~~~~~~~~~~~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~ 147 (578)
+..++++....+++++++||+|.++|.|++|++|||+||++..++++.+.+.|+|+.+.++||+++.+||+.+...
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~~y~p~~wl~n~h~qT~~~~~~~~~~~~~~~re~l~~~DG~~~~ldw~~~~~~---- 94 (388)
T PLN02511 19 EHSSLEVIGGGRDSFLPKFKSLERPYDAFPLLGNRHVETIFASFFRSLPAVRYRRECLRTPDGGAVALDWVSGDDR---- 94 (388)
T ss_pred CccceeeccchHHHHHHhhhhhcCCccCCccCCCccHHHhhHHHhcCCCCCceeEEEEECCCCCEEEEEecCcccc----
Confidence 3344444455689999999999999999999999999999999998888899999999999999999999864210
Q ss_pred cccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHH
Q 008093 148 FHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLH 227 (578)
Q Consensus 148 ~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~ 227 (578)
....++|+||++||++|++.+.|++.++..+.++||+|+++|+||||+|+.+.++.+..++++|+.+++++++
T Consensus 95 -------~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~ 167 (388)
T PLN02511 95 -------ALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQFYSASFTGDLRQVVDHVA 167 (388)
T ss_pred -------cCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcCEEcCCchHHHHHHHHHHH
Confidence 1124678999999999888877888888888899999999999999999887778888899999999999999
Q ss_pred HHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccc
Q 008093 228 HEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRY 307 (578)
Q Consensus 228 ~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l 307 (578)
.+++..+++++||||||+++++|++++++..+|.+++++++|+++......+... ....|+..+...+++....+...+
T Consensus 168 ~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~-~~~~y~~~~~~~l~~~~~~~~~~~ 246 (388)
T PLN02511 168 GRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKG-FNNVYDKALAKALRKIFAKHALLF 246 (388)
T ss_pred HHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999889999999999999999999999855699999999999875444333333 235666666666655544332222
Q ss_pred c---ccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCC
Q 008093 308 S---RLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANK 384 (578)
Q Consensus 308 ~---~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~ 384 (578)
. ...+...+.+.+++++|++.++....+|.+.++||...++...+++|++|+|+|+|+||+++|.+..+......++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy~~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~p 326 (388)
T PLN02511 247 EGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYYSNSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKANP 326 (388)
T ss_pred hhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHHHHcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcCC
Confidence 1 1234556677889999999999999999999999999999999999999999999999999998877655667789
Q ss_pred CEEEEEeCCCCcccccccccc--CcccHHHHHHHHHHhhcCC
Q 008093 385 NVVLATTWHGGHLAFFEGLTA--AGMWWVRAVNEYLGVLHSS 424 (578)
Q Consensus 385 ~~~l~~~~~GGH~~~~eg~~~--~~~w~~~~v~eFL~~~~~~ 424 (578)
+++++++++|||++|+|+... ...|+++.+.+||+.+.+.
T Consensus 327 ~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~~~ 368 (388)
T PLN02511 327 NCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALEEG 368 (388)
T ss_pred CEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHHHHh
Confidence 999999999999999997321 2359999999999988643
|
|
| >PRK10985 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-45 Score=379.89 Aligned_cols=317 Identities=29% Similarity=0.459 Sum_probs=265.7
Q ss_pred CCcccCCCCCchhHHHhhhhhhcCCCCCCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCC
Q 008093 91 GRYLVTPWLSSPHIQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLT 170 (578)
Q Consensus 91 ~~y~P~~wl~~ghlQT~~~~~~~~~~~~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~ 170 (578)
.+|.||+|+.|||+||++..++++.+.++++|+.++++||+.+.++|...+. ....+|+||++||++
T Consensus 2 ~~~~p~~~~~~~h~qt~~~~~~~~~~~~~~~~~~~~~~dg~~~~l~w~~~~~-------------~~~~~p~vll~HG~~ 68 (324)
T PRK10985 2 AEFTPMRGASNPHLQTLLPRLIRRKVLFTPYWQRLELPDGDFVDLAWSEDPA-------------QARHKPRLVLFHGLE 68 (324)
T ss_pred CCCCCCcCCCCCcHHHhhHHHhcCCCCCCcceeEEECCCCCEEEEecCCCCc-------------cCCCCCEEEEeCCCC
Confidence 4699999999999999999999888889999999999999999999975432 124578999999998
Q ss_pred CCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHH
Q 008093 171 SDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKY 250 (578)
Q Consensus 171 G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~y 250 (578)
|++.+.|++.++..|.++||+|+++|+||||+++...++.+..++.+|+.+++++++++++..+++++||||||++++.|
T Consensus 69 g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~ 148 (324)
T PRK10985 69 GSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACL 148 (324)
T ss_pred CCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceECCCchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHH
Confidence 88777788889999999999999999999999876666677777889999999999998888899999999999999999
Q ss_pred HhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccc--cCCHHHHhccCCHHHHHhh
Q 008093 251 LGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSR--LANWEGIKKSRSIRDFDSH 328 (578)
Q Consensus 251 a~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~--~~d~~~i~~~~s~~efd~~ 328 (578)
+++++++.++.++|++++|+++..+...+.... .++|.+.+...++.........+.. ..+.+.+...+++++||+.
T Consensus 149 ~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~-~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~ 227 (324)
T PRK10985 149 LAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGF-SRVYQRYLLNLLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDL 227 (324)
T ss_pred HHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhh
Confidence 999876546999999999999876655554432 4566666666665544332222222 2355677888999999999
Q ss_pred hhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccc-cCc
Q 008093 329 ATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLT-AAG 407 (578)
Q Consensus 329 ~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~-~~~ 407 (578)
++.+..+|.+..+||...+....+++|++|+|+|+|++|++++.+..+. ..+..+++.+.++++|||++|+||.. ...
T Consensus 228 ~~~~~~g~~~~~~~y~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~-~~~~~~~~~~~~~~~~GH~~~~~g~~~~~~ 306 (324)
T PRK10985 228 ITARIHGFADAIDYYRQCSALPLLNQIRKPTLIIHAKDDPFMTHEVIPK-PESLPPNVEYQLTEHGGHVGFVGGTLLKPQ 306 (324)
T ss_pred heeccCCCCCHHHHHHHCChHHHHhCCCCCEEEEecCCCCCCChhhChH-HHHhCCCeEEEECCCCCceeeCCCCCCCCC
Confidence 9999999999999999999888999999999999999999999876664 34567889999999999999999853 345
Q ss_pred ccHHHHHHHHHHhhc
Q 008093 408 MWWVRAVNEYLGVLH 422 (578)
Q Consensus 408 ~w~~~~v~eFL~~~~ 422 (578)
.|+.+.+.+|++.+.
T Consensus 307 ~w~~~~~~~~~~~~~ 321 (324)
T PRK10985 307 MWLEQRIPDWLTTYL 321 (324)
T ss_pred ccHHHHHHHHHHHhh
Confidence 799999999998764
|
|
| >PLN02298 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.2e-24 Score=224.05 Aligned_cols=278 Identities=14% Similarity=0.103 Sum_probs=167.9
Q ss_pred CCCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEe
Q 008093 117 CFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSN 196 (578)
Q Consensus 117 ~~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D 196 (578)
.+++++..++..||..+.+..+.++.. .+.+++||++||++++. .++...++..|.++||+|+++|
T Consensus 29 ~~~~~~~~~~~~dg~~l~~~~~~~~~~-------------~~~~~~VvllHG~~~~~-~~~~~~~~~~L~~~Gy~V~~~D 94 (330)
T PLN02298 29 GIKGSKSFFTSPRGLSLFTRSWLPSSS-------------SPPRALIFMVHGYGNDI-SWTFQSTAIFLAQMGFACFALD 94 (330)
T ss_pred CCccccceEEcCCCCEEEEEEEecCCC-------------CCCceEEEEEcCCCCCc-ceehhHHHHHHHhCCCEEEEec
Confidence 366788889999999998865444220 13568899999995443 3333677888989999999999
Q ss_pred CCCCCCCCCCCCCCCC-CCchHHHHHHHHHHHHH--CCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchh
Q 008093 197 HRGLGGVSITSDCFYN-AGWTEDAREVIGYLHHE--YPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL 273 (578)
Q Consensus 197 ~RG~G~S~~~~~~~~~-~~~~~Dl~~~i~~l~~~--~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~ 273 (578)
+||||.|+........ ....+|+.+++++++.. ++..+++++||||||.+++.++.++|+ +|+++|++++..+..
T Consensus 95 ~rGhG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~--~v~~lvl~~~~~~~~ 172 (330)
T PLN02298 95 LEGHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPE--GFDGAVLVAPMCKIS 172 (330)
T ss_pred CCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcc--cceeEEEecccccCC
Confidence 9999998643221111 23468999999999764 345689999999999999999999888 899999998865432
Q ss_pred hhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCC---C---HHHHHHhC-
Q 008093 274 IGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFE---T---VDTYYRNC- 346 (578)
Q Consensus 274 ~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~---~---~~~yy~~~- 346 (578)
.... .......+ ...+..+. +.+........+...................|. . .....+..
T Consensus 173 ~~~~--~~~~~~~~-----~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (330)
T PLN02298 173 DKIR--PPWPIPQI-----LTFVARFL----PTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTD 241 (330)
T ss_pred cccC--CchHHHHH-----HHHHHHHC----CCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHH
Confidence 2100 00000000 00001110 000000000000000000000000000000111 0 11111111
Q ss_pred CcccccCCCccceEEEEeCCCCCCCCCCcchHHH-hcCCCEEEEEeCCCCccccccccccCc--ccHHHHHHHHHHhhcC
Q 008093 347 SSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDEC-RANKNVVLATTWHGGHLAFFEGLTAAG--MWWVRAVNEYLGVLHS 423 (578)
Q Consensus 347 s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~-~~~~~~~l~~~~~GGH~~~~eg~~~~~--~w~~~~v~eFL~~~~~ 423 (578)
.....+.+|++|+|+|+|++|+++|.+....... ...++.++.+++++||..+++. ++. ..+.+.+.+||++...
T Consensus 242 ~~~~~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~--pd~~~~~~~~~i~~fl~~~~~ 319 (330)
T PLN02298 242 YLGKKLKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGE--PDENIEIVRRDILSWLNERCT 319 (330)
T ss_pred HHHHhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCC--CHHHHHHHHHHHHHHHHHhcc
Confidence 0124578899999999999999999886544222 2345789999999999998873 322 3567888999988653
|
|
| >PHA02857 monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.4e-23 Score=213.17 Aligned_cols=263 Identities=13% Similarity=0.104 Sum_probs=162.0
Q ss_pred EEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCC
Q 008093 124 LFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGV 203 (578)
Q Consensus 124 ~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S 203 (578)
++..+||..+.+.++.|.+ ..+++|+++||++ ++...| ..++..|.++||+|+++|+||||.|
T Consensus 4 ~~~~~~g~~l~~~~~~~~~---------------~~~~~v~llHG~~-~~~~~~-~~~~~~l~~~g~~via~D~~G~G~S 66 (276)
T PHA02857 4 CMFNLDNDYIYCKYWKPIT---------------YPKALVFISHGAG-EHSGRY-EELAENISSLGILVFSHDHIGHGRS 66 (276)
T ss_pred eeecCCCCEEEEEeccCCC---------------CCCEEEEEeCCCc-cccchH-HHHHHHHHhCCCEEEEccCCCCCCC
Confidence 4567899999887766532 3568888889995 455556 7899999999999999999999998
Q ss_pred CCCCCCCCC-CCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhH
Q 008093 204 SITSDCFYN-AGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRR 282 (578)
Q Consensus 204 ~~~~~~~~~-~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~ 282 (578)
+........ ..+.+|+.+.++++++.++..+++++||||||.+++.++..+|+ .++++|+++++.+.... .
T Consensus 67 ~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~--~i~~lil~~p~~~~~~~------~ 138 (276)
T PHA02857 67 NGEKMMIDDFGVYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPN--LFTAMILMSPLVNAEAV------P 138 (276)
T ss_pred CCccCCcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCcc--ccceEEEeccccccccc------c
Confidence 753211111 23456777778777777777899999999999999999999888 79999999986542110 0
Q ss_pred HHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccC---CCCC--HHHHHHh-CCcccccCCCc
Q 008093 283 LIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVG---KFET--VDTYYRN-CSSSTYVGNVS 356 (578)
Q Consensus 283 ~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~---g~~~--~~~yy~~-~s~~~~l~~I~ 356 (578)
. ...+...+. ..... .... .......+ .+...+.......+.. .... ....... ......+.+++
T Consensus 139 ~-~~~~~~~~~----~~~~~-~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 209 (276)
T PHA02857 139 R-LNLLAAKLM----GIFYP-NKIV-GKLCPESV--SRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIK 209 (276)
T ss_pred H-HHHHHHHHH----HHhCC-CCcc-CCCCHhhc--cCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCC
Confidence 0 000011000 00000 0000 00000000 0011111001000000 0000 0111110 11234678899
Q ss_pred cceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 357 IPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 357 vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
+|+|+++|++|.++|.+..........+++++.+++++||..+.|.. +....+.+.+.+||+..
T Consensus 210 ~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~-~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 210 TPILILQGTNNEISDVSGAYYFMQHANCNREIKIYEGAKHHLHKETD-EVKKSVMKEIETWIFNR 273 (276)
T ss_pred CCEEEEecCCCCcCChHHHHHHHHHccCCceEEEeCCCcccccCCch-hHHHHHHHHHHHHHHHh
Confidence 99999999999999988665543334457899999999999998831 11234677888898863
|
|
| >PLN02385 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-23 Score=221.96 Aligned_cols=252 Identities=13% Similarity=0.107 Sum_probs=148.7
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCC-CCchHHHHHHHHHHHHH--CCCCc
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN-AGWTEDAREVIGYLHHE--YPKAP 234 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~-~~~~~Dl~~~i~~l~~~--~~~~~ 234 (578)
+.+|+|||+||+++ +...|++.++..|+++||+|+++|+||||.|+........ ..+.+|+.++++.+... ++..+
T Consensus 85 ~~~~~iv~lHG~~~-~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~ 163 (349)
T PLN02385 85 RPKAAVCFCHGYGD-TCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIPSFDDLVDDVIEHYSKIKGNPEFRGLP 163 (349)
T ss_pred CCCeEEEEECCCCC-ccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHhccccCCCC
Confidence 45789999999955 4344557888999989999999999999999754222112 24567888888877653 34568
Q ss_pred EEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHH
Q 008093 235 LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWE 314 (578)
Q Consensus 235 i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~ 314 (578)
++++||||||.+++.++.++|+ .++++|++++........ ........+... +....... ..+.......
T Consensus 164 ~~LvGhSmGG~val~~a~~~p~--~v~glVLi~p~~~~~~~~--~~~~~~~~~~~~-----~~~~~p~~-~~~~~~~~~~ 233 (349)
T PLN02385 164 SFLFGQSMGGAVALKVHLKQPN--AWDGAILVAPMCKIADDV--VPPPLVLQILIL-----LANLLPKA-KLVPQKDLAE 233 (349)
T ss_pred EEEEEeccchHHHHHHHHhCcc--hhhheeEecccccccccc--cCchHHHHHHHH-----HHHHCCCc-eecCCCcccc
Confidence 9999999999999999999998 899999998765432110 000000111110 00100000 0000000000
Q ss_pred HHhccCCHHHHHhhhhhcc---CCCCCHHHHHHhC-CcccccCCCccceEEEEeCCCCCCCCCCcchHHHh-cCCCEEEE
Q 008093 315 GIKKSRSIRDFDSHATCLV---GKFETVDTYYRNC-SSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECR-ANKNVVLA 389 (578)
Q Consensus 315 ~i~~~~s~~efd~~~~~~~---~g~~~~~~yy~~~-s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~-~~~~~~l~ 389 (578)
.........+......... ..+....+.+... .....+.+|++|+|+|+|++|+++|.+........ .++++++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~ 313 (349)
T PLN02385 234 LAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVTDPSVSKFLYEKASSSDKKLK 313 (349)
T ss_pred ccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEeCCCCccChHHHHHHHHHcCCCCceEE
Confidence 0000000000000000000 0111112222211 12345788999999999999999998755443222 24678999
Q ss_pred EeCCCCccccccccccCc--ccHHHHHHHHHHhhc
Q 008093 390 TTWHGGHLAFFEGLTAAG--MWWVRAVNEYLGVLH 422 (578)
Q Consensus 390 ~~~~GGH~~~~eg~~~~~--~w~~~~v~eFL~~~~ 422 (578)
+++++||+.+.|. ++. ..+.+.+.+||++..
T Consensus 314 ~i~~~gH~l~~e~--p~~~~~~v~~~i~~wL~~~~ 346 (349)
T PLN02385 314 LYEDAYHSILEGE--PDEMIFQVLDDIISWLDSHS 346 (349)
T ss_pred EeCCCeeecccCC--ChhhHHHHHHHHHHHHHHhc
Confidence 9999999988773 332 126778899998754
|
|
| >COG2267 PldB Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.2e-22 Score=204.74 Aligned_cols=270 Identities=18% Similarity=0.178 Sum_probs=173.7
Q ss_pred eeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCC
Q 008093 120 YRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRG 199 (578)
Q Consensus 120 y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG 199 (578)
.....+...||..+.+.-+.+.. +.+.+||++||+ +.+...| ..++..|..+||.|+++|+||
T Consensus 9 ~~~~~~~~~d~~~~~~~~~~~~~---------------~~~g~Vvl~HG~-~Eh~~ry-~~la~~l~~~G~~V~~~D~RG 71 (298)
T COG2267 9 RTEGYFTGADGTRLRYRTWAAPE---------------PPKGVVVLVHGL-GEHSGRY-EELADDLAARGFDVYALDLRG 71 (298)
T ss_pred cccceeecCCCceEEEEeecCCC---------------CCCcEEEEecCc-hHHHHHH-HHHHHHHHhCCCEEEEecCCC
Confidence 35567888899999776655432 333789999999 5677778 789999999999999999999
Q ss_pred CCCCCC-CCCCCCC-CCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhH
Q 008093 200 LGGVSI-TSDCFYN-AGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDR 277 (578)
Q Consensus 200 ~G~S~~-~~~~~~~-~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~ 277 (578)
||.|.. .....-. ..+.+|+.++++.+...++..+++++||||||.|++.|+.+++. +|+++|+.+|.+....
T Consensus 72 hG~S~r~~rg~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~--~i~~~vLssP~~~l~~--- 146 (298)
T COG2267 72 HGRSPRGQRGHVDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPP--RIDGLVLSSPALGLGG--- 146 (298)
T ss_pred CCCCCCCCcCCchhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCc--cccEEEEECccccCCh---
Confidence 999973 2222111 24557999999999887888999999999999999999999986 8999999888776653
Q ss_pred HHhhHHHHHHHHHHHHHhHHHHHh---hhcccccccCCHHHHhccCCHHHHHhhhhhcc--CCCC---CHHHHHHhCC--
Q 008093 278 FIGRRLIQKIYDRALTIGLQDYAQ---LHEPRYSRLANWEGIKKSRSIRDFDSHATCLV--GKFE---TVDTYYRNCS-- 347 (578)
Q Consensus 278 ~l~~~~~~~~~~~~l~~~l~~~~~---~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~--~g~~---~~~~yy~~~s-- 347 (578)
..... .........+.+... ... ..........+ .+.....+.....+. .+.. .+..+.....
T Consensus 147 ~~~~~----~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~--sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~ 219 (298)
T COG2267 147 AILRL----ILARLALKLLGRIRPKLPVDS-NLLEGVLTDDL--SRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVP 219 (298)
T ss_pred hHHHH----HHHHHhcccccccccccccCc-ccccCcCcchh--hcCHHHHHHHhcCCccccCCccHHHHHHHHHhhccc
Confidence 00000 001111111111100 000 00000001111 122222222222221 1222 1222333322
Q ss_pred cccccCCCccceEEEEeCCCCCCC-CCCc-chHHHhcCCCEEEEEeCCCCccccccccccCc--ccHHHHHHHHHHhh
Q 008093 348 SSTYVGNVSIPLLCISSLDDPVCT-VEAI-PWDECRANKNVVLATTWHGGHLAFFEGLTAAG--MWWVRAVNEYLGVL 421 (578)
Q Consensus 348 ~~~~l~~I~vPvLiI~g~dDpivp-~~~~-~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~--~w~~~~v~eFL~~~ 421 (578)
......++++|+|+++|++|++++ .+.. ........+++.+.+++++.|-.+.| ++. ..+.+.+.+|+.+.
T Consensus 220 ~~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E---~~~~r~~~~~~~~~~l~~~ 294 (298)
T COG2267 220 ALRDAPAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNE---PDRAREEVLKDILAWLAEA 294 (298)
T ss_pred chhccccccCCEEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcC---cchHHHHHHHHHHHHHHhh
Confidence 334467789999999999999999 4543 33455677889999999999999999 443 45667777777764
|
|
| >PRK10749 lysophospholipase L2; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.9e-22 Score=207.81 Aligned_cols=287 Identities=15% Similarity=0.125 Sum_probs=164.8
Q ss_pred hHHHhhhhhhcCCCCCCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHH
Q 008093 103 HIQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLV 182 (578)
Q Consensus 103 hlQT~~~~~~~~~~~~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~ 182 (578)
..|+....++. ..+...+...||..+.+..+.++ ..+++||++||++ ++...| ..++
T Consensus 18 ~~~~~~~~~~~-----~~~~~~~~~~~g~~l~~~~~~~~----------------~~~~~vll~HG~~-~~~~~y-~~~~ 74 (330)
T PRK10749 18 FTMGPLLDFWR-----QREEAEFTGVDDIPIRFVRFRAP----------------HHDRVVVICPGRI-ESYVKY-AELA 74 (330)
T ss_pred HHHHHHHHHHh-----hccceEEEcCCCCEEEEEEccCC----------------CCCcEEEEECCcc-chHHHH-HHHH
Confidence 35565555542 22445666778988876544331 2456899999995 455556 6788
Q ss_pred HHHHhCCceEEEEeCCCCCCCCCCCCC-----CCC-CCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCC
Q 008093 183 FNTAKRGWNVVVSNHRGLGGVSITSDC-----FYN-AGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGE 256 (578)
Q Consensus 183 ~~l~~~Gy~Vvv~D~RG~G~S~~~~~~-----~~~-~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~ 256 (578)
..+.++||+|+++|+||||.|+..... .+. ..+.+|+.++++.+...++..+++++||||||.+++.++..+|+
T Consensus 75 ~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~ 154 (330)
T PRK10749 75 YDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPG 154 (330)
T ss_pred HHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCC
Confidence 888899999999999999999753221 111 24557888888887766677899999999999999999999988
Q ss_pred CCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhc---ccccccC-CHHHHhccC-CHHHHHhhhh-
Q 008093 257 KTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHE---PRYSRLA-NWEGIKKSR-SIRDFDSHAT- 330 (578)
Q Consensus 257 ~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~---~~l~~~~-d~~~i~~~~-s~~efd~~~~- 330 (578)
.++++|++++......... ......+... +.. ......... ....... ....+.... ...++.+.+.
T Consensus 155 --~v~~lvl~~p~~~~~~~~~---~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 227 (330)
T PRK10749 155 --VFDAIALCAPMFGIVLPLP---SWMARRILNW-AEG-HPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYAD 227 (330)
T ss_pred --CcceEEEECchhccCCCCC---cHHHHHHHHH-HHH-hcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHh
Confidence 8999999987643211100 0001111111 000 000000000 0000000 000000000 0001111111
Q ss_pred hcc--CCCCCH---HHHHHh-CCcccccCCCccceEEEEeCCCCCCCCCCcchHHHh------cCCCEEEEEeCCCCccc
Q 008093 331 CLV--GKFETV---DTYYRN-CSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECR------ANKNVVLATTWHGGHLA 398 (578)
Q Consensus 331 ~~~--~g~~~~---~~yy~~-~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~------~~~~~~l~~~~~GGH~~ 398 (578)
.+. .+.... .+.+.. ......+.++++|+|+|+|++|++++.+........ ..+++++++++++||..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~ 307 (330)
T PRK10749 228 DPELRVGGPTYHWVRESILAGEQVLAGAGDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEI 307 (330)
T ss_pred CCCcccCCCcHHHHHHHHHHHHHHHhhccCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchh
Confidence 110 000111 111111 112345788999999999999999998754432111 12567899999999999
Q ss_pred cccccccCcccHHHHHHHHHHh
Q 008093 399 FFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 399 ~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
+.|... .+..+.+.|.+||++
T Consensus 308 ~~E~~~-~r~~v~~~i~~fl~~ 328 (330)
T PRK10749 308 LFEKDA-MRSVALNAIVDFFNR 328 (330)
T ss_pred hhCCcH-HHHHHHHHHHHHHhh
Confidence 988310 123466788888875
|
|
| >TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.1e-22 Score=201.46 Aligned_cols=247 Identities=15% Similarity=0.146 Sum_probs=146.7
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEE
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAI 238 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lv 238 (578)
..++|||+||++++ ...| ..+++.|.+ +|+|+++|+||||.|+..........+.+|+.++++++. ..+++++
T Consensus 24 ~~~plvllHG~~~~-~~~w-~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~i~~l~----~~~~~Lv 96 (276)
T TIGR02240 24 GLTPLLIFNGIGAN-LELV-FPFIEALDP-DLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAARMLDYLD----YGQVNAI 96 (276)
T ss_pred CCCcEEEEeCCCcc-hHHH-HHHHHHhcc-CceEEEECCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhC----cCceEEE
Confidence 34568999999554 4455 677887765 799999999999999754222222345567777777663 3589999
Q ss_pred EEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHH-HHHHHHHHHHHhH--HHHHhhhcccccccCCHHH
Q 008093 239 GTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRL-IQKIYDRALTIGL--QDYAQLHEPRYSRLANWEG 315 (578)
Q Consensus 239 GhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~-~~~~~~~~l~~~l--~~~~~~~~~~l~~~~d~~~ 315 (578)
||||||.+++.+|.++|+ +|+++|+++++.............. .... ...+.... ..........+. .+.+
T Consensus 97 G~S~GG~va~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~- 170 (276)
T TIGR02240 97 GVSWGGALAQQFAHDYPE--RCKKLILAATAAGAVMVPGKPKVLMMMASP-RRYIQPSHGIHIAPDIYGGAFR--RDPE- 170 (276)
T ss_pred EECHHHHHHHHHHHHCHH--HhhheEEeccCCccccCCCchhHHHHhcCc-hhhhccccccchhhhhccceee--ccch-
Confidence 999999999999999998 8999999998754211000000000 0000 00000000 000000000000 0000
Q ss_pred HhccCCHHHHHhhhhhccCCCCCHHHHHH--hCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCC
Q 008093 316 IKKSRSIRDFDSHATCLVGKFETVDTYYR--NCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWH 393 (578)
Q Consensus 316 i~~~~s~~efd~~~~~~~~g~~~~~~yy~--~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~ 393 (578)
....+.... ...........+.. .......+.+|++|+|+|+|++|+++|.+.... .....++.++.+++
T Consensus 171 -----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~-l~~~~~~~~~~~i~- 242 (276)
T TIGR02240 171 -----LAMAHASKV-RSGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRL-LAWRIPNAELHIID- 242 (276)
T ss_pred -----hhhhhhhhc-ccCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHH-HHHhCCCCEEEEEc-
Confidence 000000000 00000000111111 111224578999999999999999999876544 44566788888887
Q ss_pred CCccccccccccCcccHHHHHHHHHHhhcCCCccccc
Q 008093 394 GGHLAFFEGLTAAGMWWVRAVNEYLGVLHSSPYMHVR 430 (578)
Q Consensus 394 GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~~~~~~~~ 430 (578)
+||+.+.|. | ..+.+.+.+|+++.....++|.+
T Consensus 243 ~gH~~~~e~--p--~~~~~~i~~fl~~~~~~~~~~~~ 275 (276)
T TIGR02240 243 DGHLFLITR--A--EAVAPIIMKFLAEERQRAVMHPR 275 (276)
T ss_pred CCCchhhcc--H--HHHHHHHHHHHHHhhhhccCCCC
Confidence 599999883 3 36999999999998888877754
|
This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid. |
| >PLN02652 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.9e-21 Score=205.93 Aligned_cols=271 Identities=16% Similarity=0.150 Sum_probs=164.2
Q ss_pred eeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCC
Q 008093 120 YRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRG 199 (578)
Q Consensus 120 y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG 199 (578)
+....+..+||..+.+..+.+.. .+.+++||++||+++ +...| ..++..|.++||+|+++|+||
T Consensus 110 ~~~~~~~~~~~~~l~~~~~~p~~--------------~~~~~~Vl~lHG~~~-~~~~~-~~~a~~L~~~Gy~V~~~D~rG 173 (395)
T PLN02652 110 WATSLFYGARRNALFCRSWAPAA--------------GEMRGILIIIHGLNE-HSGRY-LHFAKQLTSCGFGVYAMDWIG 173 (395)
T ss_pred EEEEEEECCCCCEEEEEEecCCC--------------CCCceEEEEECCchH-HHHHH-HHHHHHHHHCCCEEEEeCCCC
Confidence 34445666777777655554422 245678999999954 44446 788999999999999999999
Q ss_pred CCCCCCCCCCCCC-CCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCC-CCCccEEEEEcCCcchhhhhH
Q 008093 200 LGGVSITSDCFYN-AGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGE-KTPVAGAAAICSPWDLLIGDR 277 (578)
Q Consensus 200 ~G~S~~~~~~~~~-~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~-~~~V~~~Vlis~p~d~~~~~~ 277 (578)
||.|+........ ..+.+|+.++++++..+++..+++++||||||.+++.++. +++ ...++++|+.++..+......
T Consensus 174 hG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~ 252 (395)
T PLN02652 174 HGGSDGLHGYVPSLDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHP 252 (395)
T ss_pred CCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchH
Confidence 9999765322222 2345899999999998887779999999999999997765 442 126999999887654432111
Q ss_pred HHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhcc--CCCCCHH---HHHHhC-Ccccc
Q 008093 278 FIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLV--GKFETVD---TYYRNC-SSSTY 351 (578)
Q Consensus 278 ~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~--~g~~~~~---~yy~~~-s~~~~ 351 (578)
... ....++... ...+ .+.... .....-..........+..+. .+..... +.++.. .....
T Consensus 253 -~~~-~~~~l~~~~----~p~~------~~~~~~-~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~ 319 (395)
T PLN02652 253 -IVG-AVAPIFSLV----APRF------QFKGAN-KRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRN 319 (395)
T ss_pred -HHH-HHHHHHHHh----CCCC------cccCcc-cccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhh
Confidence 000 011111110 0000 000000 000000000011111110010 1111111 111111 11346
Q ss_pred cCCCccceEEEEeCCCCCCCCCCcchHHHh-cCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcC
Q 008093 352 VGNVSIPLLCISSLDDPVCTVEAIPWDECR-ANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHS 423 (578)
Q Consensus 352 l~~I~vPvLiI~g~dDpivp~~~~~~~~~~-~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~ 423 (578)
+.+|++|+|+++|++|.++|.+........ .++++.+.++++++|..++| +++..+.+.+.+||+...+
T Consensus 320 L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e---~~~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 320 FKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFE---PEREEVGRDIIDWMEKRLD 389 (395)
T ss_pred cccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccC---CCHHHHHHHHHHHHHHHhh
Confidence 788999999999999999998755443222 44567889999999999887 4455688999999997653
|
|
| >PRK00870 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.7e-22 Score=203.92 Aligned_cols=270 Identities=14% Similarity=0.090 Sum_probs=149.4
Q ss_pred CCCCCeeEEEEEecC--CcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceE
Q 008093 115 PPCFSYRRQLFRLSD--GGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNV 192 (578)
Q Consensus 115 ~~~~~y~r~~l~~~D--G~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~V 192 (578)
.+.+++....+.+.+ |+.+.+.+.... ++++|+|||+||+++ +...| ..+++.|.+.||+|
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~i~y~~~G---------------~~~~~~lvliHG~~~-~~~~w-~~~~~~L~~~gy~v 76 (302)
T PRK00870 14 LPDYPFAPHYVDVDDGDGGPLRMHYVDEG---------------PADGPPVLLLHGEPS-WSYLY-RKMIPILAAAGHRV 76 (302)
T ss_pred CcCCCCCceeEeecCCCCceEEEEEEecC---------------CCCCCEEEEECCCCC-chhhH-HHHHHHHHhCCCEE
Confidence 344555555666654 665555544321 124578999999954 45456 78888998889999
Q ss_pred EEEeCCCCCCCCCCCC-CCCC-CCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 193 VVSNHRGLGGVSITSD-CFYN-AGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 193 vv~D~RG~G~S~~~~~-~~~~-~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
+++|+||||.|..... ..++ ..+.+|+.++++++ +..+++++||||||.+++.++.++|+ +|.++|++++..
T Consensus 77 i~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~ 150 (302)
T PRK00870 77 IAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQL----DLTDVTLVCQDWGGLIGLRLAAEHPD--RFARLVVANTGL 150 (302)
T ss_pred EEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHc----CCCCEEEEEEChHHHHHHHHHHhChh--heeEEEEeCCCC
Confidence 9999999999965422 1122 22334555554443 45689999999999999999999988 899999998643
Q ss_pred chhhh--hHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhcc---CCHHHHHhhh--hhc--cCCCCC-HH
Q 008093 271 DLLIG--DRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKS---RSIRDFDSHA--TCL--VGKFET-VD 340 (578)
Q Consensus 271 d~~~~--~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~---~s~~efd~~~--~~~--~~g~~~-~~ 340 (578)
..... ...... + ..+........+....... .......+..... .....+.... ... ..+... ..
T Consensus 151 ~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (302)
T PRK00870 151 PTGDGPMPDAFWA-W-RAFSQYSPVLPVGRLVNGG---TVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAV 225 (302)
T ss_pred CCccccchHHHhh-h-hcccccCchhhHHHHhhcc---ccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcch
Confidence 21110 000000 0 0000000000000000000 0000000000000 0000000000 000 000000 00
Q ss_pred HHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEE---EEEeCCCCccccccccccCcccHHHHHHHH
Q 008093 341 TYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVV---LATTWHGGHLAFFEGLTAAGMWWVRAVNEY 417 (578)
Q Consensus 341 ~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~---l~~~~~GGH~~~~eg~~~~~~w~~~~v~eF 417 (578)
.... .....+.++++|+|+|+|++|+++|... . ......++.. +.+++++||+.++|. + ..+.+.+.+|
T Consensus 226 ~~~~--~~~~~l~~i~~P~lii~G~~D~~~~~~~-~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~--p--~~~~~~l~~f 297 (302)
T PRK00870 226 AANR--AAWAVLERWDKPFLTAFSDSDPITGGGD-A-ILQKRIPGAAGQPHPTIKGAGHFLQEDS--G--EELAEAVLEF 297 (302)
T ss_pred HHHH--HHHHhhhcCCCceEEEecCCCCcccCch-H-HHHhhcccccccceeeecCCCccchhhC--h--HHHHHHHHHH
Confidence 0000 0123568899999999999999999765 3 3455556554 789999999999883 3 3688999999
Q ss_pred HHh
Q 008093 418 LGV 420 (578)
Q Consensus 418 L~~ 420 (578)
++.
T Consensus 298 l~~ 300 (302)
T PRK00870 298 IRA 300 (302)
T ss_pred Hhc
Confidence 865
|
|
| >PLN02824 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.3e-21 Score=198.99 Aligned_cols=241 Identities=16% Similarity=0.145 Sum_probs=139.2
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCC------CCC-CCchHHHHHHHHHHHHHCCC
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDC------FYN-AGWTEDAREVIGYLHHEYPK 232 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~------~~~-~~~~~Dl~~~i~~l~~~~~~ 232 (578)
.|+|||+||+++++ ..| +.++..|.++ |+|+++|+||||.|+...+. .|+ ..+.+|+.++++.+ ..
T Consensus 29 ~~~vlllHG~~~~~-~~w-~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l----~~ 101 (294)
T PLN02824 29 GPALVLVHGFGGNA-DHW-RKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDV----VG 101 (294)
T ss_pred CCeEEEECCCCCCh-hHH-HHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHh----cC
Confidence 46799999996544 455 6788888765 69999999999999765321 122 23445666666554 34
Q ss_pred CcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhh--hHHHhhHHHHHHHHHHHHH-hH-HHHHhhh-----
Q 008093 233 APLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIG--DRFIGRRLIQKIYDRALTI-GL-QDYAQLH----- 303 (578)
Q Consensus 233 ~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~--~~~l~~~~~~~~~~~~l~~-~l-~~~~~~~----- 303 (578)
.+++++||||||.+++.++.++|+ +|+++|+++++...... .....+.....+ ...+.. .. +.+....
T Consensus 102 ~~~~lvGhS~Gg~va~~~a~~~p~--~v~~lili~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 178 (294)
T PLN02824 102 DPAFVICNSVGGVVGLQAAVDAPE--LVRGVMLINISLRGLHIKKQPWLGRPFIKAF-QNLLRETAVGKAFFKSVATPET 178 (294)
T ss_pred CCeEEEEeCHHHHHHHHHHHhChh--heeEEEEECCCcccccccccchhhhHHHHHH-HHHHhchhHHHHHHHhhcCHHH
Confidence 689999999999999999999998 89999999975421100 000001000000 000000 00 0000000
Q ss_pred -cccccc-cCCHHHHhccCCHHHHHhhhhhccCCCCCHHH---HHHhC---CcccccCCCccceEEEEeCCCCCCCCCCc
Q 008093 304 -EPRYSR-LANWEGIKKSRSIRDFDSHATCLVGKFETVDT---YYRNC---SSSTYVGNVSIPLLCISSLDDPVCTVEAI 375 (578)
Q Consensus 304 -~~~l~~-~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~---yy~~~---s~~~~l~~I~vPvLiI~g~dDpivp~~~~ 375 (578)
...+.. ..+.. ... .+....+............ +.... .....+++|++|+|+|+|++|+++|.+..
T Consensus 179 ~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~ 253 (294)
T PLN02824 179 VKNILCQCYHDDS----AVT-DELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPVLIAWGEKDPWEPVELG 253 (294)
T ss_pred HHHHHHHhccChh----hcc-HHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCCeEEEEecCCCCCChHHH
Confidence 000000 00000 000 0000111000000000111 11000 11245788999999999999999998755
Q ss_pred chHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHh
Q 008093 376 PWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 376 ~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
.. .....++.++.+++++||+.++|. | ..+.+.|.+|++.
T Consensus 254 ~~-~~~~~~~~~~~~i~~~gH~~~~e~--p--~~~~~~i~~fl~~ 293 (294)
T PLN02824 254 RA-YANFDAVEDFIVLPGVGHCPQDEA--P--ELVNPLIESFVAR 293 (294)
T ss_pred HH-HHhcCCccceEEeCCCCCChhhhC--H--HHHHHHHHHHHhc
Confidence 44 455667788999999999999983 3 3599999999875
|
|
| >PRK03592 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.1e-21 Score=199.34 Aligned_cols=246 Identities=14% Similarity=0.089 Sum_probs=140.9
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEE
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIG 239 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG 239 (578)
+|+||++||+++ +...| +.++..|.+.+ +|+++|+||||.|+..........+.+|+.++++.+. ..+++++|
T Consensus 27 g~~vvllHG~~~-~~~~w-~~~~~~L~~~~-~via~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~~l~----~~~~~lvG 99 (295)
T PRK03592 27 GDPIVFLHGNPT-SSYLW-RNIIPHLAGLG-RCLAPDLIGMGASDKPDIDYTFADHARYLDAWFDALG----LDDVVLVG 99 (295)
T ss_pred CCEEEEECCCCC-CHHHH-HHHHHHHhhCC-EEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC----CCCeEEEE
Confidence 467999999954 44455 78888988875 9999999999999765432222344567777766653 46899999
Q ss_pred EchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhH--------HHHHhhhccc-cccc
Q 008093 240 TSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGL--------QDYAQLHEPR-YSRL 310 (578)
Q Consensus 240 hSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l--------~~~~~~~~~~-l~~~ 310 (578)
|||||.+++.++..+|+ +|+++|+++++........ ..... ...+.......+ ..+....... +...
T Consensus 100 hS~Gg~ia~~~a~~~p~--~v~~lil~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (295)
T PRK03592 100 HDWGSALGFDWAARHPD--RVRGIAFMEAIVRPMTWDD-FPPAV-RELFQALRSPGEGEEMVLEENVFIERVLPGSILRP 175 (295)
T ss_pred ECHHHHHHHHHHHhChh--heeEEEEECCCCCCcchhh-cchhH-HHHHHHHhCcccccccccchhhHHhhcccCccccc
Confidence 99999999999999998 8999999997432110000 00000 000110000000 0000000000 0000
Q ss_pred CCHHHHhc----cCCH---HHHHhhhhh-ccCCCC-CHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHh
Q 008093 311 ANWEGIKK----SRSI---RDFDSHATC-LVGKFE-TVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECR 381 (578)
Q Consensus 311 ~d~~~i~~----~~s~---~efd~~~~~-~~~g~~-~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~ 381 (578)
...+.+.. .... ..+...... ...++. ....... .....+.+|++|+|+|+|++|+++++.........
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~ 253 (295)
T PRK03592 176 LSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVE--EYAQWLATSDVPKLLINAEPGAILTTGAIRDWCRS 253 (295)
T ss_pred CCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhh--HhHHHhccCCCCeEEEeccCCcccCcHHHHHHHHH
Confidence 00000000 0000 000000000 000000 0000000 01234678999999999999999965544333445
Q ss_pred cCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhc
Q 008093 382 ANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 382 ~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~ 422 (578)
..++.++.+++++||+.++|. | ..+.+.+.+|+++..
T Consensus 254 ~~~~~~~~~i~~~gH~~~~e~--p--~~v~~~i~~fl~~~~ 290 (295)
T PRK03592 254 WPNQLEITVFGAGLHFAQEDS--P--EEIGAAIAAWLRRLR 290 (295)
T ss_pred hhhhcceeeccCcchhhhhcC--H--HHHHHHHHHHHHHhc
Confidence 567889999999999999983 3 369999999998753
|
|
| >KOG1455 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.8e-21 Score=192.64 Aligned_cols=280 Identities=13% Similarity=0.078 Sum_probs=176.0
Q ss_pred CCCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEe
Q 008093 117 CFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSN 196 (578)
Q Consensus 117 ~~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D 196 (578)
.+.+....++.++|..+-..|+.|.. ..+.+..|+++||+++.+...| +.++..|+..||.|+++|
T Consensus 24 ~~~~~~~~~~n~rG~~lft~~W~p~~-------------~~~pr~lv~~~HG~g~~~s~~~-~~~a~~l~~~g~~v~a~D 89 (313)
T KOG1455|consen 24 GVTYSESFFTNPRGAKLFTQSWLPLS-------------GTEPRGLVFLCHGYGEHSSWRY-QSTAKRLAKSGFAVYAID 89 (313)
T ss_pred ccceeeeeEEcCCCCEeEEEecccCC-------------CCCCceEEEEEcCCcccchhhH-HHHHHHHHhCCCeEEEee
Confidence 45667778899999888555554422 1256678999999966554455 889999999999999999
Q ss_pred CCCCCCCCCCCCCCCC-CCchHHHHHHHHHHHH--HCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchh
Q 008093 197 HRGLGGVSITSDCFYN-AGWTEDAREVIGYLHH--EYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL 273 (578)
Q Consensus 197 ~RG~G~S~~~~~~~~~-~~~~~Dl~~~i~~l~~--~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~ 273 (578)
++|||+|++....... ....+|+...++.++. .++..+.+++||||||.++++++.++|. ..+|+|++++-....
T Consensus 90 ~~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~--~w~G~ilvaPmc~i~ 167 (313)
T KOG1455|consen 90 YEGHGRSDGLHAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPN--FWDGAILVAPMCKIS 167 (313)
T ss_pred ccCCCcCCCCcccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCc--ccccceeeecccccC
Confidence 9999999876544333 2335788888887554 4577899999999999999999999887 789999998765443
Q ss_pred hhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCC---CCHHHHHHhCCc-c
Q 008093 274 IGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKF---ETVDTYYRNCSS-S 349 (578)
Q Consensus 274 ~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~---~~~~~yy~~~s~-~ 349 (578)
..... .+....+ ...+...+..++ ..+.....+...+....+.....--....+. ++..+..+.+.- .
T Consensus 168 ~~~kp--~p~v~~~-----l~~l~~liP~wk-~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le 239 (313)
T KOG1455|consen 168 EDTKP--HPPVISI-----LTLLSKLIPTWK-IVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLE 239 (313)
T ss_pred CccCC--CcHHHHH-----HHHHHHhCCcee-ecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHH
Confidence 22110 0111111 111112221111 1111000000111111111100000001222 233344443322 2
Q ss_pred cccCCCccceEEEEeCCCCCCCCCCcch-HHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHh
Q 008093 350 TYVGNVSIPLLCISSLDDPVCTVEAIPW-DECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 350 ~~l~~I~vPvLiI~g~dDpivp~~~~~~-~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
..+.++++|.|++||++|.++.++.... .+...+.+.++.++|+.-|..+.....++...+...|.+||++
T Consensus 240 ~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~ 311 (313)
T KOG1455|consen 240 KNLNEVTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDE 311 (313)
T ss_pred HhcccccccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHh
Confidence 5788999999999999999999886543 4566788899999999999887622223334566788888875
|
|
| >TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.8e-21 Score=193.54 Aligned_cols=239 Identities=11% Similarity=0.056 Sum_probs=136.0
Q ss_pred CcEEEEECCCCCCCccHHH--HHHHHHHHhCCceEEEEeCCCCCCCCCCCCCC-CCCCchHHHHHHHHHHHHHCCCCcEE
Q 008093 160 TPIAIVIPGLTSDSAASYI--RHLVFNTAKRGWNVVVSNHRGLGGVSITSDCF-YNAGWTEDAREVIGYLHHEYPKAPLF 236 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi--~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~-~~~~~~~Dl~~~i~~l~~~~~~~~i~ 236 (578)
.|+||++||++++.. .|- ...+..+.+.||+|+++|+||||.|+...... ......+|+.++++.+ +..+++
T Consensus 30 ~~~ivllHG~~~~~~-~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l----~~~~~~ 104 (282)
T TIGR03343 30 GEAVIMLHGGGPGAG-GWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDAL----DIEKAH 104 (282)
T ss_pred CCeEEEECCCCCchh-hHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHHc----CCCCee
Confidence 467999999954433 231 12345666789999999999999997542211 1112356666666654 445899
Q ss_pred EEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHH---HHHhHHHHHhhhcccccc-cCC
Q 008093 237 AIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRA---LTIGLQDYAQLHEPRYSR-LAN 312 (578)
Q Consensus 237 lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~---l~~~l~~~~~~~~~~l~~-~~d 312 (578)
++||||||.+++.++.++|+ +++++|+++++..................+... ....+........ +.. ..+
T Consensus 105 lvG~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 180 (282)
T TIGR03343 105 LVGNSMGGATALNFALEYPD--RIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQMLNVFL--FDQSLIT 180 (282)
T ss_pred EEEECchHHHHHHHHHhChH--hhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHHHHhhCc--cCcccCc
Confidence 99999999999999999988 899999998753211000000000000010000 0000111110000 000 000
Q ss_pred HHHHh-----ccCCHHHHHhhhhhc-cCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCE
Q 008093 313 WEGIK-----KSRSIRDFDSHATCL-VGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNV 386 (578)
Q Consensus 313 ~~~i~-----~~~s~~efd~~~~~~-~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~ 386 (578)
..... .......+....... ...+. .......+++|++|+|+++|++|++++.+.... .....++.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~-~~~~~~~~ 252 (282)
T TIGR03343 181 EELLQGRWENIQRQPEHLKNFLISSQKAPLS-------TWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLK-LLWNMPDA 252 (282)
T ss_pred HHHHHhHHHHhhcCHHHHHHHHHhccccccc-------cchHHHHHhhCCCCEEEEEccCCCcCCchhHHH-HHHhCCCC
Confidence 00000 000000000000000 00000 001123577899999999999999999875544 45667899
Q ss_pred EEEEeCCCCccccccccccCcccHHHHHHHHHH
Q 008093 387 VLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 387 ~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
++++++++||+.+.|. +..+.+.|.+||+
T Consensus 253 ~~~~i~~agH~~~~e~----p~~~~~~i~~fl~ 281 (282)
T TIGR03343 253 QLHVFSRCGHWAQWEH----ADAFNRLVIDFLR 281 (282)
T ss_pred EEEEeCCCCcCCcccC----HHHHHHHHHHHhh
Confidence 9999999999999983 3358899999986
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. |
| >TIGR01607 PST-A Plasmodium subtelomeric family (PST-A) | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.6e-21 Score=199.42 Aligned_cols=272 Identities=17% Similarity=0.148 Sum_probs=155.8
Q ss_pred EEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHH------------------------HH
Q 008093 125 FRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYI------------------------RH 180 (578)
Q Consensus 125 l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi------------------------~~ 180 (578)
+...||..|....+.+. +.+.+|+++||+++.+...|+ ..
T Consensus 2 ~~~~~g~~l~~~~~~~~----------------~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~ 65 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVK----------------NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDS 65 (332)
T ss_pred ccCCCCCeEEEeeeecc----------------CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHH
Confidence 45678888865544431 356799999999776654554 35
Q ss_pred HHHHHHhCCceEEEEeCCCCCCCCCCCC-CCCCCC---chHHHHHHHHHHHH-------------------HCC-CCcEE
Q 008093 181 LVFNTAKRGWNVVVSNHRGLGGVSITSD-CFYNAG---WTEDAREVIGYLHH-------------------EYP-KAPLF 236 (578)
Q Consensus 181 l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~-~~~~~~---~~~Dl~~~i~~l~~-------------------~~~-~~~i~ 236 (578)
+++.|.++||+|+++|+||||.|..... ..+..+ ..+|+.++++.+++ .++ +.|++
T Consensus 66 ~~~~l~~~G~~V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 145 (332)
T TIGR01607 66 WIENFNKNGYSVYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMY 145 (332)
T ss_pred HHHHHHHCCCcEEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCcee
Confidence 7899999999999999999999875422 222122 34688888887765 355 67999
Q ss_pred EEEEchHHHHHHHHHhhcCCC------CCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhccccccc
Q 008093 237 AIGTSIGANILVKYLGEEGEK------TPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRL 310 (578)
Q Consensus 237 lvGhSmGG~ial~ya~~~p~~------~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~ 310 (578)
++||||||++++.++.+.+.. ..++|+|++++++.+.......... ....... +...+..........-...
T Consensus 146 l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~-~~~~~~~-l~~~~~~~~p~~~~~~~~~ 223 (332)
T TIGR01607 146 IIGLSMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFK-FKYFYLP-VMNFMSRVFPTFRISKKIR 223 (332)
T ss_pred EeeccCccHHHHHHHHHhccccccccccccceEEEeccceEEecccCCCcch-hhhhHHH-HHHHHHHHCCcccccCccc
Confidence 999999999999998765431 2589999999887542210000000 0000000 1111111111000000000
Q ss_pred CCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCC-cccccCCC--ccceEEEEeCCCCCCCCCCcchHH-HhcCCCE
Q 008093 311 ANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCS-SSTYVGNV--SIPLLCISSLDDPVCTVEAIPWDE-CRANKNV 386 (578)
Q Consensus 311 ~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s-~~~~l~~I--~vPvLiI~g~dDpivp~~~~~~~~-~~~~~~~ 386 (578)
..++.. .....+.|..............+++.... ....+.++ ++|+|+++|++|++++.+...... ....+++
T Consensus 224 ~~~~~~--~~~~~~~Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~ 301 (332)
T TIGR01607 224 YEKSPY--VNDIIKFDKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNK 301 (332)
T ss_pred cccChh--hhhHHhcCccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCc
Confidence 000000 00001111111000000111122222111 11234555 799999999999999987554322 2334678
Q ss_pred EEEEeCCCCccccccccccCcccHHHHHHHHHH
Q 008093 387 VLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 387 ~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
.+.++++++|..+.| ++...+.+.+.+||+
T Consensus 302 ~l~~~~g~~H~i~~E---~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 302 ELHTLEDMDHVITIE---PGNEEVLKKIIEWIS 331 (332)
T ss_pred EEEEECCCCCCCccC---CCHHHHHHHHHHHhh
Confidence 999999999999998 334457788888875
|
These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii. |
| >TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.4e-21 Score=188.91 Aligned_cols=232 Identities=11% Similarity=0.149 Sum_probs=133.5
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEE
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIG 239 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG 239 (578)
+|+||++||+++ +...| +.++..|.+ +|+|+++|+||||.|+.... .++.++++.+.... ..+++++|
T Consensus 4 ~~~iv~~HG~~~-~~~~~-~~~~~~l~~-~~~vi~~d~~G~G~s~~~~~--------~~~~~~~~~~~~~~-~~~~~lvG 71 (245)
T TIGR01738 4 NVHLVLIHGWGM-NAEVF-RCLDEELSA-HFTLHLVDLPGHGRSRGFGP--------LSLADAAEAIAAQA-PDPAIWLG 71 (245)
T ss_pred CceEEEEcCCCC-chhhH-HHHHHhhcc-CeEEEEecCCcCccCCCCCC--------cCHHHHHHHHHHhC-CCCeEEEE
Confidence 467999999954 55555 778888764 79999999999999864321 12334444444333 35899999
Q ss_pred EchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHH---HhhHHHHHHHHHH---HHHhHHHHHhhhcccccccCCH
Q 008093 240 TSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRF---IGRRLIQKIYDRA---LTIGLQDYAQLHEPRYSRLANW 313 (578)
Q Consensus 240 hSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~---l~~~~~~~~~~~~---l~~~l~~~~~~~~~~l~~~~d~ 313 (578)
|||||.+++.++.++|+ .+.++|++++.........+ ........+.... ....+..+.... .+......
T Consensus 72 ~S~Gg~~a~~~a~~~p~--~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 147 (245)
T TIGR01738 72 WSLGGLVALHIAATHPD--RVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQ--TLGTPTAR 147 (245)
T ss_pred EcHHHHHHHHHHHHCHH--hhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHH--HhcCCccc
Confidence 99999999999999988 89999998764322110000 0000001110000 000001110000 00000000
Q ss_pred HHHhccCCHHHHHhhhhhc-cCCCCCHHH---HHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEE
Q 008093 314 EGIKKSRSIRDFDSHATCL-VGKFETVDT---YYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLA 389 (578)
Q Consensus 314 ~~i~~~~s~~efd~~~~~~-~~g~~~~~~---yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~ 389 (578)
. ....+...+... ......... .+...+....+.+|++|+|+++|++|+++|.+.... ..+..+++++.
T Consensus 148 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~-~~~~~~~~~~~ 220 (245)
T TIGR01738 148 Q------DARALKQTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPY-LDKLAPHSELY 220 (245)
T ss_pred h------HHHHHHHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHH-HHHhCCCCeEE
Confidence 0 000111110000 000011111 111222234678999999999999999999875443 45567899999
Q ss_pred EeCCCCccccccccccCcccHHHHHHHHH
Q 008093 390 TTWHGGHLAFFEGLTAAGMWWVRAVNEYL 418 (578)
Q Consensus 390 ~~~~GGH~~~~eg~~~~~~w~~~~v~eFL 418 (578)
+++++||+.++|. + ..+.+.|.+|+
T Consensus 221 ~~~~~gH~~~~e~--p--~~~~~~i~~fi 245 (245)
T TIGR01738 221 IFAKAAHAPFLSH--A--EAFCALLVAFK 245 (245)
T ss_pred EeCCCCCCccccC--H--HHHHHHHHhhC
Confidence 9999999999983 3 35888888885
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria. |
| >COG1647 Esterase/lipase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.5e-21 Score=181.92 Aligned_cols=225 Identities=14% Similarity=0.162 Sum_probs=154.0
Q ss_pred cEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEE
Q 008093 161 PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGT 240 (578)
Q Consensus 161 PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGh 240 (578)
-.|+++||++|++.+ ++.+++.|.++||.|.++++||||..+-.--......|.+|+.+..+++... +...|.++|.
T Consensus 16 ~AVLllHGFTGt~~D--vr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~-gy~eI~v~Gl 92 (243)
T COG1647 16 RAVLLLHGFTGTPRD--VRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEA-GYDEIAVVGL 92 (243)
T ss_pred EEEEEEeccCCCcHH--HHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHc-CCCeEEEEee
Confidence 569999999998887 7999999999999999999999998642212222346888999999999844 3457999999
Q ss_pred chHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccC
Q 008093 241 SIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSR 320 (578)
Q Consensus 241 SmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~ 320 (578)
||||.++++++...| ++++|.+|+|.........+.. +... ..+.+.+.. +
T Consensus 93 SmGGv~alkla~~~p----~K~iv~m~a~~~~k~~~~iie~-----~l~y--~~~~kk~e~------------------k 143 (243)
T COG1647 93 SMGGVFALKLAYHYP----PKKIVPMCAPVNVKSWRIIIEG-----LLEY--FRNAKKYEG------------------K 143 (243)
T ss_pred cchhHHHHHHHhhCC----ccceeeecCCcccccchhhhHH-----HHHH--HHHhhhccC------------------C
Confidence 999999999998874 6799999999876543222211 1110 011111111 1
Q ss_pred CHHHHHhhhhhccC-CCCCHHHHHHhC-CcccccCCCccceEEEEeCCCCCCCCCCcch-HHHhcCCCEEEEEeCCCCcc
Q 008093 321 SIRDFDSHATCLVG-KFETVDTYYRNC-SSSTYVGNVSIPLLCISSLDDPVCTVEAIPW-DECRANKNVVLATTWHGGHL 397 (578)
Q Consensus 321 s~~efd~~~~~~~~-g~~~~~~yy~~~-s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~-~~~~~~~~~~l~~~~~GGH~ 397 (578)
+..++++....-.. -..+..+++... ...+.+..|..|+++++|.+|+++|.+.... .........++..+++.||+
T Consensus 144 ~~e~~~~e~~~~~~~~~~~~~~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHV 223 (243)
T COG1647 144 DQEQIDKEMKSYKDTPMTTTAQLKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHV 223 (243)
T ss_pred CHHHHHHHHHHhhcchHHHHHHHHHHHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCce
Confidence 11111111110000 011122222211 2346788999999999999999999986543 34556778899999999999
Q ss_pred ccccccccCcccHHHHHHHHHHh
Q 008093 398 AFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 398 ~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
.-.+ .++..+.+.|.+||+.
T Consensus 224 It~D---~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 224 ITLD---KERDQVEEDVITFLEK 243 (243)
T ss_pred eecc---hhHHHHHHHHHHHhhC
Confidence 9877 4566789999999863
|
|
| >TIGR03611 RutD pyrimidine utilization protein D | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.5e-20 Score=186.42 Aligned_cols=239 Identities=16% Similarity=0.151 Sum_probs=137.3
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCC-CCchHHHHHHHHHHHHHCCCCcEE
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN-AGWTEDAREVIGYLHHEYPKAPLF 236 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~-~~~~~Dl~~~i~~l~~~~~~~~i~ 236 (578)
+++|+||++||++++ ...| ..++..+. +||+|+++|+||||.|....+..+. ..+.+|+.++++++ ...+++
T Consensus 11 ~~~~~iv~lhG~~~~-~~~~-~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~----~~~~~~ 83 (257)
T TIGR03611 11 ADAPVVVLSSGLGGS-GSYW-APQLDVLT-QRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDAL----NIERFH 83 (257)
T ss_pred CCCCEEEEEcCCCcc-hhHH-HHHHHHHH-hccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHh----CCCcEE
Confidence 457889999999654 4444 56666665 5899999999999999754333232 23335555555544 345899
Q ss_pred EEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHH
Q 008093 237 AIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGI 316 (578)
Q Consensus 237 lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i 316 (578)
++||||||.+++.+++.+++ .++++|++++............... ..+.... ....+... ...+. .....+
T Consensus 84 l~G~S~Gg~~a~~~a~~~~~--~v~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~-~~~~~--~~~~~~ 154 (257)
T TIGR03611 84 FVGHALGGLIGLQLALRYPE--RLLSLVLINAWSRPDPHTRRCFDVR-IALLQHA---GPEAYVHA-QALFL--YPADWI 154 (257)
T ss_pred EEEechhHHHHHHHHHHChH--HhHHheeecCCCCCChhHHHHHHHH-HHHHhcc---Ccchhhhh-hhhhh--ccccHh
Confidence 99999999999999999887 7999999886443321111000000 0000000 00000000 00000 000000
Q ss_pred hccCCHHHHHhhhhhccCCCCCHHH------HHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEE
Q 008093 317 KKSRSIRDFDSHATCLVGKFETVDT------YYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLAT 390 (578)
Q Consensus 317 ~~~~s~~efd~~~~~~~~g~~~~~~------yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~ 390 (578)
.... ....+........+..... .....+....++++++|+|+++|++|+++|.+.... .....++..+..
T Consensus 155 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~-~~~~~~~~~~~~ 231 (257)
T TIGR03611 155 SENA--ARLAADEAHALAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLR-LAAALPNAQLKL 231 (257)
T ss_pred hccc--hhhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHH-HHHhcCCceEEE
Confidence 0000 0000000000011111111 112223335678899999999999999999875443 445567889999
Q ss_pred eCCCCccccccccccCcccHHHHHHHHHH
Q 008093 391 TWHGGHLAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 391 ~~~GGH~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
++++||..+++. +..+.+.+.+||+
T Consensus 232 ~~~~gH~~~~~~----~~~~~~~i~~fl~ 256 (257)
T TIGR03611 232 LPYGGHASNVTD----PETFNRALLDFLK 256 (257)
T ss_pred ECCCCCCccccC----HHHHHHHHHHHhc
Confidence 999999988873 3358889999986
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. |
| >TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Probab=99.86 E-value=7e-21 Score=187.07 Aligned_cols=238 Identities=13% Similarity=0.163 Sum_probs=137.5
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEE
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAI 238 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lv 238 (578)
.+|+||++||++ ++...| +.++..+. .||+|+++|+||||.|+..........+.+|+.++++. .+..+++++
T Consensus 12 ~~~~li~~hg~~-~~~~~~-~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~----~~~~~v~li 84 (251)
T TIGR02427 12 GAPVLVFINSLG-TDLRMW-DPVLPALT-PDFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDH----LGIERAVFC 84 (251)
T ss_pred CCCeEEEEcCcc-cchhhH-HHHHHHhh-cccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----hCCCceEEE
Confidence 568999999994 455555 66777765 68999999999999986543221112333455444443 345689999
Q ss_pred EEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhh-hcccccccCCHHHHh
Q 008093 239 GTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQL-HEPRYSRLANWEGIK 317 (578)
Q Consensus 239 GhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~-~~~~l~~~~d~~~i~ 317 (578)
||||||.+++.+|.++|+ .++++|+++++........+... ........+.......... ....+.. ...
T Consensus 85 G~S~Gg~~a~~~a~~~p~--~v~~li~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---- 155 (251)
T TIGR02427 85 GLSLGGLIAQGLAARRPD--RVRALVLSNTAAKIGTPESWNAR--IAAVRAEGLAALADAVLERWFTPGFRE-AHP---- 155 (251)
T ss_pred EeCchHHHHHHHHHHCHH--HhHHHhhccCccccCchhhHHHH--HhhhhhccHHHHHHHHHHHHccccccc-CCh----
Confidence 999999999999999887 79999988865432211111000 0000000000000000000 0000000 000
Q ss_pred ccCCHHHHHhhhhh-ccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCc
Q 008093 318 KSRSIRDFDSHATC-LVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGH 396 (578)
Q Consensus 318 ~~~s~~efd~~~~~-~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH 396 (578)
.....+.+.... ...++......+........+.++++|+++++|++|+++|.+.... .....++.++.+++++||
T Consensus 156 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~-~~~~~~~~~~~~~~~~gH 232 (251)
T TIGR02427 156 --ARLDLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVRE-IADLVPGARFAEIRGAGH 232 (251)
T ss_pred --HHHHHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHH-HHHhCCCceEEEECCCCC
Confidence 000011111100 0111111122222233345678899999999999999999875443 445567889999999999
Q ss_pred cccccccccCcccHHHHHHHHHH
Q 008093 397 LAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 397 ~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
+.+++. + ..+.+.+.+|+.
T Consensus 233 ~~~~~~--p--~~~~~~i~~fl~ 251 (251)
T TIGR02427 233 IPCVEQ--P--EAFNAALRDFLR 251 (251)
T ss_pred cccccC--h--HHHHHHHHHHhC
Confidence 999883 3 357888888863
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. |
| >PLN02679 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.2e-20 Score=194.25 Aligned_cols=242 Identities=17% Similarity=0.176 Sum_probs=138.0
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCC-CCchHHHHHHHHHHHHHCCCCcEEE
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN-AGWTEDAREVIGYLHHEYPKAPLFA 237 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~-~~~~~Dl~~~i~~l~~~~~~~~i~l 237 (578)
..|+|||+||+++ +...| ..++..|.+ +|+|+++|+||||.|+......|+ ..+.+|+.++++.+ ...++++
T Consensus 87 ~gp~lvllHG~~~-~~~~w-~~~~~~L~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l----~~~~~~l 159 (360)
T PLN02679 87 SGPPVLLVHGFGA-SIPHW-RRNIGVLAK-NYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEV----VQKPTVL 159 (360)
T ss_pred CCCeEEEECCCCC-CHHHH-HHHHHHHhc-CCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHHh----cCCCeEE
Confidence 4578999999965 44455 677777765 899999999999999764322222 23445666655543 3468999
Q ss_pred EEEchHHHHHHHHHhh-cCCCCCccEEEEEcCCcchhhh---hHHHhhHH--HHHHHHHH-----HHHhH-H-----HHH
Q 008093 238 IGTSIGANILVKYLGE-EGEKTPVAGAAAICSPWDLLIG---DRFIGRRL--IQKIYDRA-----LTIGL-Q-----DYA 300 (578)
Q Consensus 238 vGhSmGG~ial~ya~~-~p~~~~V~~~Vlis~p~d~~~~---~~~l~~~~--~~~~~~~~-----l~~~l-~-----~~~ 300 (578)
+||||||.+++.++.. +|+ +|+++|+++++...... ........ ....+... +...+ . ...
T Consensus 160 vGhS~Gg~ia~~~a~~~~P~--rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (360)
T PLN02679 160 IGNSVGSLACVIAASESTRD--LVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALFNRVKQRDNL 237 (360)
T ss_pred EEECHHHHHHHHHHHhcChh--hcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchhhHHHHHHHhcCHHHH
Confidence 9999999999988874 577 89999999875321100 00000000 00000000 00000 0 000
Q ss_pred hh-hcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHh------CCcccccCCCccceEEEEeCCCCCCCCC
Q 008093 301 QL-HEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRN------CSSSTYVGNVSIPLLCISSLDDPVCTVE 373 (578)
Q Consensus 301 ~~-~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~------~s~~~~l~~I~vPvLiI~g~dDpivp~~ 373 (578)
+. ....+.. .. ....++.+.+............+... ......+.+|++|+|+|+|++|+++|.+
T Consensus 238 ~~~~~~~~~~---~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~G~~D~~~p~~ 309 (360)
T PLN02679 238 KNILLSVYGN---KE-----AVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVLWGDQDPFTPLD 309 (360)
T ss_pred HHHHHHhccC---cc-----cCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEEEeCCCCCcCch
Confidence 00 0000000 00 00001111110000000111111111 1112457789999999999999999986
Q ss_pred Cc--c--hHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 374 AI--P--WDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 374 ~~--~--~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
.. . ....+..++.++.+++++||+.+.|. | ..+.+.|.+||+++
T Consensus 310 ~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~--P--e~~~~~I~~FL~~~ 357 (360)
T PLN02679 310 GPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDR--P--DLVHEKLLPWLAQL 357 (360)
T ss_pred hhHHHHHHhhhccCCceEEEEcCCCCCCccccC--H--HHHHHHHHHHHHhc
Confidence 31 1 12344568899999999999999983 3 35999999999875
|
|
| >PRK13604 luxD acyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.9e-20 Score=186.52 Aligned_cols=249 Identities=14% Similarity=0.079 Sum_probs=158.1
Q ss_pred eEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCC
Q 008093 121 RRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGL 200 (578)
Q Consensus 121 ~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~ 200 (578)
..+.+.+.||.++...|..|.+. ...+.++||++||+++ ....| ..+++.|+++||+|+.+|+|||
T Consensus 10 ~~~~~~~~dG~~L~Gwl~~P~~~------------~~~~~~~vIi~HGf~~-~~~~~-~~~A~~La~~G~~vLrfD~rg~ 75 (307)
T PRK13604 10 IDHVICLENGQSIRVWETLPKEN------------SPKKNNTILIASGFAR-RMDHF-AGLAEYLSSNGFHVIRYDSLHH 75 (307)
T ss_pred hhheEEcCCCCEEEEEEEcCccc------------CCCCCCEEEEeCCCCC-ChHHH-HHHHHHHHHCCCEEEEecCCCC
Confidence 55778899999999777665321 1346689999999976 44444 8899999999999999999998
Q ss_pred -CCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHH
Q 008093 201 -GGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFI 279 (578)
Q Consensus 201 -G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l 279 (578)
|.|++.-..........|+.++++|++.+. ..+++++||||||.+++..|++. +++++|+.||..++... +
T Consensus 76 ~GeS~G~~~~~t~s~g~~Dl~aaid~lk~~~-~~~I~LiG~SmGgava~~~A~~~----~v~~lI~~sp~~~l~d~---l 147 (307)
T PRK13604 76 VGLSSGTIDEFTMSIGKNSLLTVVDWLNTRG-INNLGLIAASLSARIAYEVINEI----DLSFLITAVGVVNLRDT---L 147 (307)
T ss_pred CCCCCCccccCcccccHHHHHHHHHHHHhcC-CCceEEEEECHHHHHHHHHhcCC----CCCEEEEcCCcccHHHH---H
Confidence 888765332322334689999999998864 56899999999999986665532 48889998887765421 1
Q ss_pred hhHHHHHHHHHHHHHhHHHHHhhhccc--ccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCcc
Q 008093 280 GRRLIQKIYDRALTIGLQDYAQLHEPR--YSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSI 357 (578)
Q Consensus 280 ~~~~~~~~~~~~l~~~l~~~~~~~~~~--l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~v 357 (578)
.+ .++.... ..+. ++...+.... .-....|..... ..++ +...++.+.++++++
T Consensus 148 ~~-------------~~~~~~~-~~p~~~lp~~~d~~g~--~l~~~~f~~~~~--~~~~------~~~~s~i~~~~~l~~ 203 (307)
T PRK13604 148 ER-------------ALGYDYL-SLPIDELPEDLDFEGH--NLGSEVFVTDCF--KHGW------DTLDSTINKMKGLDI 203 (307)
T ss_pred HH-------------hhhcccc-cCcccccccccccccc--cccHHHHHHHHH--hcCc------cccccHHHHHhhcCC
Confidence 10 0000000 0000 0000000000 000011111000 0000 112334466778899
Q ss_pred ceEEEEeCCCCCCCCCCcchHHH-hcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcCC
Q 008093 358 PLLCISSLDDPVCTVEAIPWDEC-RANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSS 424 (578)
Q Consensus 358 PvLiI~g~dDpivp~~~~~~~~~-~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~~ 424 (578)
|+|+|||.+|.+||.+....... ..+.+..+..+++++|.- .|. ...+..|.+.+...
T Consensus 204 PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l-~~~--------~~~~~~~~~~~~~~ 262 (307)
T PRK13604 204 PFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHDL-GEN--------LVVLRNFYQSVTKA 262 (307)
T ss_pred CEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCcccc-Ccc--------hHHHHHHHHHHHHH
Confidence 99999999999999986644333 334689999999999953 331 24667788877543
|
|
| >TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.7e-20 Score=185.47 Aligned_cols=246 Identities=16% Similarity=0.134 Sum_probs=136.4
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCC-CCchHHHHHHHHHHHHHCCCCcEEE
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN-AGWTEDAREVIGYLHHEYPKAPLFA 237 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~-~~~~~Dl~~~i~~l~~~~~~~~i~l 237 (578)
+.|+||++||+++ +...| +.++..|.+ +|+|+++|+||||.|.......++ ..+.+|+.++++. .+..++++
T Consensus 27 ~~~~vv~~hG~~~-~~~~~-~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~----~~~~~~~l 99 (278)
T TIGR03056 27 AGPLLLLLHGTGA-STHSW-RDLMPPLAR-SFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAA----EGLSPDGV 99 (278)
T ss_pred CCCeEEEEcCCCC-CHHHH-HHHHHHHhh-CcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHH----cCCCCceE
Confidence 4578999999955 44455 677777765 799999999999998754332222 2333455554443 34468999
Q ss_pred EEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHH-HHHHHhHHHHHhhhcccccccCC-HHH
Q 008093 238 IGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYD-RALTIGLQDYAQLHEPRYSRLAN-WEG 315 (578)
Q Consensus 238 vGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~-~~l~~~l~~~~~~~~~~l~~~~d-~~~ 315 (578)
+||||||.+++.++..+++ +++++|++++.................+... ..+...+................ ...
T Consensus 100 vG~S~Gg~~a~~~a~~~p~--~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (278)
T TIGR03056 100 IGHSAGAAIALRLALDGPV--TPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMMSRGAADQQRVERLIRDTGS 177 (278)
T ss_pred EEECccHHHHHHHHHhCCc--ccceEEEEcCcccccccccccccchhhHhhhhcccchHHHHhhcccCcchhHHhhcccc
Confidence 9999999999999999887 7999999987654221100000000000000 00000000000000000000000 000
Q ss_pred HhccCCHHHHHhhhhhccCCCCCHHHHHHhC---CcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeC
Q 008093 316 IKKSRSIRDFDSHATCLVGKFETVDTYYRNC---SSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTW 392 (578)
Q Consensus 316 i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~---s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~ 392 (578)
.........+..... ....+....++.... .....+++|++|+|+|+|++|.++|.+.... .....++.++..++
T Consensus 178 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~~~~~~-~~~~~~~~~~~~~~ 255 (278)
T TIGR03056 178 LLDKAGMTYYGRLIR-SPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAVPPDESKR-AATRVPTATLHVVP 255 (278)
T ss_pred ccccchhhHHHHhhc-CchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcccCHHHHHH-HHHhccCCeEEEEC
Confidence 000000000000000 000001111111110 1123577899999999999999999875443 45667889999999
Q ss_pred CCCccccccccccCcccHHHHHHHHHH
Q 008093 393 HGGHLAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 393 ~GGH~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
++||+.+.|. + ..+.+.|.+|++
T Consensus 256 ~~gH~~~~e~--p--~~~~~~i~~f~~ 278 (278)
T TIGR03056 256 GGGHLVHEEQ--A--DGVVGLILQAAE 278 (278)
T ss_pred CCCCcccccC--H--HHHHHHHHHHhC
Confidence 9999999883 3 358899999874
|
Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity. |
| >TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.6e-20 Score=183.90 Aligned_cols=239 Identities=16% Similarity=0.231 Sum_probs=136.6
Q ss_pred cEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEE
Q 008093 161 PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGT 240 (578)
Q Consensus 161 PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGh 240 (578)
|+||++||++++ ...| +.++..|. +||+|+++|+||||.|+.... ....++.+.+.+++..+.+..+..+++++||
T Consensus 2 ~~vv~~hG~~~~-~~~~-~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 77 (251)
T TIGR03695 2 PVLVFLHGFLGS-GADW-QALIELLG-PHFRCLAIDLPGHGSSQSPDE-IERYDFEEAAQDILATLLDQLGIEPFFLVGY 77 (251)
T ss_pred CEEEEEcCCCCc-hhhH-HHHHHHhc-ccCeEEEEcCCCCCCCCCCCc-cChhhHHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 679999999654 4445 78888887 799999999999999965421 1122222333333566666667779999999
Q ss_pred chHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHH-HhHHHHHhhhc--cccccc--CCHHH
Q 008093 241 SIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALT-IGLQDYAQLHE--PRYSRL--ANWEG 315 (578)
Q Consensus 241 SmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~-~~l~~~~~~~~--~~l~~~--~d~~~ 315 (578)
||||.+++.++..+|+ .|.+++++++............+......+...+. .....+..... ..+... .+..
T Consensus 78 S~Gg~ia~~~a~~~~~--~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 154 (251)
T TIGR03695 78 SMGGRIALYYALQYPE--RVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLFASQKNLPPE- 154 (251)
T ss_pred ccHHHHHHHHHHhCch--heeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCceeeecccCChH-
Confidence 9999999999999988 79999999875433221111000000000000000 00111111000 000000 0000
Q ss_pred HhccCCHHHHHhhhhhccCCCCCHHHHHHhC------CcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEE
Q 008093 316 IKKSRSIRDFDSHATCLVGKFETVDTYYRNC------SSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLA 389 (578)
Q Consensus 316 i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~------s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~ 389 (578)
....+..... .........++... .....+.++++|+|+++|++|+.++. .. .......++.++.
T Consensus 155 -----~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~-~~-~~~~~~~~~~~~~ 225 (251)
T TIGR03695 155 -----QRQALRAKRL--ANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFVQ-IA-KEMQKLLPNLTLV 225 (251)
T ss_pred -----HhHHHHHhcc--cccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHHH-HH-HHHHhcCCCCcEE
Confidence 0000000000 00001111111111 12234678999999999999987642 22 2345567889999
Q ss_pred EeCCCCccccccccccCcccHHHHHHHHHH
Q 008093 390 TTWHGGHLAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 390 ~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
+++++||+.++|. ++ .+.+.+.+||+
T Consensus 226 ~~~~~gH~~~~e~--~~--~~~~~i~~~l~ 251 (251)
T TIGR03695 226 IIANAGHNIHLEN--PE--AFAKILLAFLE 251 (251)
T ss_pred EEcCCCCCcCccC--hH--HHHHHHHHHhC
Confidence 9999999999984 33 47888888873
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. |
| >PRK10349 carboxylesterase BioH; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.7e-20 Score=186.89 Aligned_cols=232 Identities=11% Similarity=0.090 Sum_probs=133.8
Q ss_pred cEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEE
Q 008093 161 PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGT 240 (578)
Q Consensus 161 PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGh 240 (578)
|.|||+||+++ +...| +.++..|.+ +|+|+++|+||||.|+... .+ . .+++.+ .+.+ ....+++++||
T Consensus 14 ~~ivllHG~~~-~~~~w-~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~--~~--~-~~~~~~---~l~~-~~~~~~~lvGh 81 (256)
T PRK10349 14 VHLVLLHGWGL-NAEVW-RCIDEELSS-HFTLHLVDLPGFGRSRGFG--AL--S-LADMAE---AVLQ-QAPDKAIWLGW 81 (256)
T ss_pred CeEEEECCCCC-ChhHH-HHHHHHHhc-CCEEEEecCCCCCCCCCCC--CC--C-HHHHHH---HHHh-cCCCCeEEEEE
Confidence 46999999954 44455 678888865 5999999999999987432 11 1 233332 3322 23468999999
Q ss_pred chHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhH--HHhhHHHHHHHHHH---HHHhHHHHHhhhcccccccCCHHH
Q 008093 241 SIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDR--FIGRRLIQKIYDRA---LTIGLQDYAQLHEPRYSRLANWEG 315 (578)
Q Consensus 241 SmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~--~l~~~~~~~~~~~~---l~~~l~~~~~~~~~~l~~~~d~~~ 315 (578)
||||.+++.+|.++|+ +|+++|+++++........ .........+.... +...+..+..... +.. ....
T Consensus 82 S~Gg~ia~~~a~~~p~--~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~- 155 (256)
T PRK10349 82 SLGGLVASQIALTHPE--RVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQT--MGT-ETAR- 155 (256)
T ss_pred CHHHHHHHHHHHhChH--hhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHH--ccC-chHH-
Confidence 9999999999999888 8999999986422111000 00000001111100 0001111110000 000 0000
Q ss_pred HhccCCHHHHHhhhhh-ccCCCCC---HHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEe
Q 008093 316 IKKSRSIRDFDSHATC-LVGKFET---VDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATT 391 (578)
Q Consensus 316 i~~~~s~~efd~~~~~-~~~g~~~---~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~ 391 (578)
....++...... ....... ....+...+....+.++++|+|+|+|++|+++|.+... ......++.++.++
T Consensus 156 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~-~~~~~i~~~~~~~i 230 (256)
T PRK10349 156 ----QDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVP-MLDKLWPHSESYIF 230 (256)
T ss_pred ----HHHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHH-HHHHhCCCCeEEEe
Confidence 000011111100 0000001 11222333445678899999999999999999876543 34566789999999
Q ss_pred CCCCccccccccccCcccHHHHHHHHHH
Q 008093 392 WHGGHLAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 392 ~~GGH~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
+++||+.++|. | ..+.+.+.+|-.
T Consensus 231 ~~~gH~~~~e~--p--~~f~~~l~~~~~ 254 (256)
T PRK10349 231 AKAAHAPFISH--P--AEFCHLLVALKQ 254 (256)
T ss_pred CCCCCCccccC--H--HHHHHHHHHHhc
Confidence 99999999983 3 358888888844
|
|
| >PLN02872 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=99.84 E-value=2e-20 Score=199.01 Aligned_cols=307 Identities=17% Similarity=0.156 Sum_probs=177.0
Q ss_pred chhHHHhhhhhhcCCCCCCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHH---
Q 008093 101 SPHIQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASY--- 177 (578)
Q Consensus 101 ~ghlQT~~~~~~~~~~~~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~y--- 177 (578)
..-+||++..++.+. ..+.+++.++++||..+.+.|..+.... .....+|+|+++||+.+++..+.
T Consensus 26 ~~~~~t~~~~~i~~~-gy~~e~h~v~T~DGy~L~l~ri~~~~~~----------~~~~~~~~Vll~HGl~~ss~~w~~~~ 94 (395)
T PLN02872 26 RSPVESLCAQLIHPA-GYSCTEHTIQTKDGYLLALQRVSSRNPR----------LGSQRGPPVLLQHGLFMAGDAWFLNS 94 (395)
T ss_pred CCCchhhHHHHHHHc-CCCceEEEEECCCCcEEEEEEcCCCCCC----------CCCCCCCeEEEeCcccccccceeecC
Confidence 345899988777654 6788999999999999999998542210 11234688999999966554422
Q ss_pred -HHHHHHHHHhCCceEEEEeCCCCCCCCC----C--CCCCCCCCc----hHHHHHHHHHHHHHCCCCcEEEEEEchHHHH
Q 008093 178 -IRHLVFNTAKRGWNVVVSNHRGLGGVSI----T--SDCFYNAGW----TEDAREVIGYLHHEYPKAPLFAIGTSIGANI 246 (578)
Q Consensus 178 -i~~l~~~l~~~Gy~Vvv~D~RG~G~S~~----~--~~~~~~~~~----~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~i 246 (578)
.+.++..|+++||+|+++|.||++.+.. . ...++...+ ..|+.++++++.+..+ .+++++||||||.+
T Consensus 95 ~~~sla~~La~~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~-~~v~~VGhS~Gg~~ 173 (395)
T PLN02872 95 PEQSLGFILADHGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITN-SKIFIVGHSQGTIM 173 (395)
T ss_pred cccchHHHHHhCCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccC-CceEEEEECHHHHH
Confidence 1456778899999999999999876532 1 122222222 2699999999976543 68999999999999
Q ss_pred HHHHHhhcCC-CCCccEEEEEcCCcchhhhhHHHhhHH----HHHHH---------------HHHHHHhHHHHHhhhccc
Q 008093 247 LVKYLGEEGE-KTPVAGAAAICSPWDLLIGDRFIGRRL----IQKIY---------------DRALTIGLQDYAQLHEPR 306 (578)
Q Consensus 247 al~ya~~~p~-~~~V~~~Vlis~p~d~~~~~~~l~~~~----~~~~~---------------~~~l~~~l~~~~~~~~~~ 306 (578)
++.++ .+|+ ...|+++++++|..........+.... ...++ .. +...+..........
T Consensus 174 ~~~~~-~~p~~~~~v~~~~~l~P~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~C~~~~~c~~~ 251 (395)
T PLN02872 174 SLAAL-TQPNVVEMVEAAALLCPISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVK-LLDSICEGHMDCNDL 251 (395)
T ss_pred HHHHh-hChHHHHHHHHHHHhcchhhhccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHH-HHHHHccCchhHHHH
Confidence 98666 3443 125778888877543211111110000 00000 00 000000000000000
Q ss_pred ---ccc---cCCHHHH-------hccCCHH---HHHhhhhhc---cCCCC---CHHHHHHhCCcccccCCC--ccceEEE
Q 008093 307 ---YSR---LANWEGI-------KKSRSIR---DFDSHATCL---VGKFE---TVDTYYRNCSSSTYVGNV--SIPLLCI 362 (578)
Q Consensus 307 ---l~~---~~d~~~i-------~~~~s~~---efd~~~~~~---~~g~~---~~~~yy~~~s~~~~l~~I--~vPvLiI 362 (578)
+.. ..+...+ ....+.+ .|.+.+... .+.|. +...|-+...+...+.+| ++|++++
T Consensus 252 ~~~~~g~~~~~n~~~~~~~~~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~ 331 (395)
T PLN02872 252 LTSITGTNCCFNASRIDYYLEYEPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMG 331 (395)
T ss_pred HHHHhCCCcccchhhhhHHHhcCCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEE
Confidence 000 0000000 0111222 222222111 12222 222333334455678888 6899999
Q ss_pred EeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhc
Q 008093 363 SSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 363 ~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~ 422 (578)
+|++|.+++++..............+..+++.||+.|+-+. ..+..+.+.|.+|+++..
T Consensus 332 ~G~~D~lv~~~dv~~l~~~Lp~~~~l~~l~~~gH~dfi~~~-eape~V~~~Il~fL~~~~ 390 (395)
T PLN02872 332 YGGTDGLADVTDVEHTLAELPSKPELLYLENYGHIDFLLST-SAKEDVYNHMIQFFRSLG 390 (395)
T ss_pred EcCCCCCCCHHHHHHHHHHCCCccEEEEcCCCCCHHHHhCc-chHHHHHHHHHHHHHHhh
Confidence 99999999987665433333333678889999999776321 123358899999998654
|
|
| >TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Probab=99.84 E-value=2e-19 Score=181.00 Aligned_cols=246 Identities=12% Similarity=0.152 Sum_probs=132.3
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCC--CCCCchHHHHHHHHHHHHHCCCCcEEE
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCF--YNAGWTEDAREVIGYLHHEYPKAPLFA 237 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~--~~~~~~~Dl~~~i~~l~~~~~~~~i~l 237 (578)
+|+||++||+.|++.. |...+...+.+.||+|+++|+||||.|....... ++ .+++.+.+..+.+.....++++
T Consensus 25 ~~~vl~~hG~~g~~~~-~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l 100 (288)
T TIGR01250 25 KIKLLLLHGGPGMSHE-YLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWT---IDYFVDELEEVREKLGLDKFYL 100 (288)
T ss_pred CCeEEEEcCCCCccHH-HHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCccccccc---HHHHHHHHHHHHHHcCCCcEEE
Confidence 5779999998776654 4366766776679999999999999987542211 22 2333333333444444567999
Q ss_pred EEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhh---cccccccC-CH
Q 008093 238 IGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLH---EPRYSRLA-NW 313 (578)
Q Consensus 238 vGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~---~~~l~~~~-d~ 313 (578)
+||||||.+++.++..+|+ ++.++|++++............... ..+.......+....... .+...... ..
T Consensus 101 iG~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (288)
T TIGR01250 101 LGHSWGGMLAQEYALKYGQ--HLKGLIISSMLDSAPEYVKELNRLR--KELPPEVRAAIKRCEASGDYDNPEYQEAVEVF 176 (288)
T ss_pred EEeehHHHHHHHHHHhCcc--ccceeeEecccccchHHHHHHHHHH--hhcChhHHHHHHHHHhccCcchHHHHHHHHHH
Confidence 9999999999999999988 8999998876433221111000000 000000000000000000 00000000 00
Q ss_pred H--HHhccC----CHHHHHhh----hhhccCCCCC--HHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHh
Q 008093 314 E--GIKKSR----SIRDFDSH----ATCLVGKFET--VDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECR 381 (578)
Q Consensus 314 ~--~i~~~~----s~~efd~~----~~~~~~g~~~--~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~ 381 (578)
. ...... ....+... +.....+-.. ....+........+.++++|+|+++|++|++. ++... ....
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~-~~~~~-~~~~ 254 (288)
T TIGR01250 177 YHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVGEFDTMT-PEAAR-EMQE 254 (288)
T ss_pred HHHhhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhccCCCEEEEecCCCccC-HHHHH-HHHH
Confidence 0 000000 00000000 0000000000 00001111223456789999999999999864 44333 2445
Q ss_pred cCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHH
Q 008093 382 ANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 382 ~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
..++.++.+++++||+.++|. +..+.+.|.+||+
T Consensus 255 ~~~~~~~~~~~~~gH~~~~e~----p~~~~~~i~~fl~ 288 (288)
T TIGR01250 255 LIAGSRLVVFPDGSHMTMIED----PEVYFKLLSDFIR 288 (288)
T ss_pred hccCCeEEEeCCCCCCcccCC----HHHHHHHHHHHhC
Confidence 567888999999999999983 3358889988874
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase |
| >PRK10673 acyl-CoA esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.6e-20 Score=184.44 Aligned_cols=234 Identities=14% Similarity=0.089 Sum_probs=140.2
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEE
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFA 237 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~l 237 (578)
.++|+||++||++++. ..| ..++..|. .+|+|+++|+||||.|..... .....+.+|+.++++++ +..++++
T Consensus 14 ~~~~~iv~lhG~~~~~-~~~-~~~~~~l~-~~~~vi~~D~~G~G~s~~~~~-~~~~~~~~d~~~~l~~l----~~~~~~l 85 (255)
T PRK10673 14 HNNSPIVLVHGLFGSL-DNL-GVLARDLV-NDHDIIQVDMRNHGLSPRDPV-MNYPAMAQDLLDTLDAL----QIEKATF 85 (255)
T ss_pred CCCCCEEEECCCCCch-hHH-HHHHHHHh-hCCeEEEECCCCCCCCCCCCC-CCHHHHHHHHHHHHHHc----CCCceEE
Confidence 4678899999996654 445 66777775 479999999999999875422 22234557777777665 3457999
Q ss_pred EEEchHHHHHHHHHhhcCCCCCccEEEEEcC-CcchhhhhHHHhhHHHHHHHHHHHHHhH---HHHHhhhcccccccCCH
Q 008093 238 IGTSIGANILVKYLGEEGEKTPVAGAAAICS-PWDLLIGDRFIGRRLIQKIYDRALTIGL---QDYAQLHEPRYSRLANW 313 (578)
Q Consensus 238 vGhSmGG~ial~ya~~~p~~~~V~~~Vlis~-p~d~~~~~~~l~~~~~~~~~~~~l~~~l---~~~~~~~~~~l~~~~d~ 313 (578)
+||||||.+++.++..+++ +|+++|++++ |.+..... . ...... ......... ..........+ .
T Consensus 86 vGhS~Gg~va~~~a~~~~~--~v~~lvli~~~~~~~~~~~--~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----~- 154 (255)
T PRK10673 86 IGHSMGGKAVMALTALAPD--RIDKLVAIDIAPVDYHVRR--H-DEIFAA-INAVSEAGATTRQQAAAIMRQHL----N- 154 (255)
T ss_pred EEECHHHHHHHHHHHhCHh--hcceEEEEecCCCCccchh--h-HHHHHH-HHHhhhcccccHHHHHHHHHHhc----C-
Confidence 9999999999999999988 8999999874 32211000 0 000000 000000000 00000000000 0
Q ss_pred HHHhccCCHHHHHh-hhhhcc--CCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEE
Q 008093 314 EGIKKSRSIRDFDS-HATCLV--GKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLAT 390 (578)
Q Consensus 314 ~~i~~~~s~~efd~-~~~~~~--~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~ 390 (578)
......+.. .+.... .........+........+.++++|+|+|+|++|++++.+.... ..+..++.++.+
T Consensus 155 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~-~~~~~~~~~~~~ 228 (255)
T PRK10673 155 -----EEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDD-LLAQFPQARAHV 228 (255)
T ss_pred -----CHHHHHHHHhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHH-HHHhCCCcEEEE
Confidence 000000000 000000 00001111223333345677889999999999999998765443 456678999999
Q ss_pred eCCCCccccccccccCcccHHHHHHHHHHh
Q 008093 391 TWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 391 ~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
++++||+.++|. +..+.+.+.+||++
T Consensus 229 ~~~~gH~~~~~~----p~~~~~~l~~fl~~ 254 (255)
T PRK10673 229 IAGAGHWVHAEK----PDAVLRAIRRYLND 254 (255)
T ss_pred eCCCCCeeeccC----HHHHHHHHHHHHhc
Confidence 999999998873 34688999999874
|
|
| >PLN02965 Probable pheophorbidase | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.5e-20 Score=187.44 Aligned_cols=240 Identities=12% Similarity=0.078 Sum_probs=137.8
Q ss_pred EEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCC-CCchHHHHHHHHHHHHHCCCCcEEEEEE
Q 008093 162 IAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN-AGWTEDAREVIGYLHHEYPKAPLFAIGT 240 (578)
Q Consensus 162 iVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~-~~~~~Dl~~~i~~l~~~~~~~~i~lvGh 240 (578)
.|||+||+++ +...| +.++..|.+.||+|+++|+||||.|+......+. ....+|+.++++.+. ...+++++||
T Consensus 5 ~vvllHG~~~-~~~~w-~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~---~~~~~~lvGh 79 (255)
T PLN02965 5 HFVFVHGASH-GAWCW-YKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLP---PDHKVILVGH 79 (255)
T ss_pred EEEEECCCCC-CcCcH-HHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcC---CCCCEEEEec
Confidence 3899999965 44445 6788888888999999999999999754332222 233456666665542 1248999999
Q ss_pred chHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHH-hhhcc-cccc-cCCHHHH-
Q 008093 241 SIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYA-QLHEP-RYSR-LANWEGI- 316 (578)
Q Consensus 241 SmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~-~~~~~-~l~~-~~d~~~i- 316 (578)
||||.+++.++.++|+ +|+++|++++........ .. .......... ..+.... ..... .... .......
T Consensus 80 SmGG~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~-~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (255)
T PLN02965 80 SIGGGSVTEALCKFTD--KISMAIYVAAAMVKPGSI-IS-PRLKNVMEGT---EKIWDYTFGEGPDKPPTGIMMKPEFVR 152 (255)
T ss_pred CcchHHHHHHHHhCch--heeEEEEEccccCCCCCC-cc-HHHHhhhhcc---ccceeeeeccCCCCCcchhhcCHHHHH
Confidence 9999999999999988 899999998742110000 00 0000000000 0000000 00000 0000 0000000
Q ss_pred ---hccCCHHHHHhhhhh-ccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeC
Q 008093 317 ---KKSRSIRDFDSHATC-LVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTW 392 (578)
Q Consensus 317 ---~~~~s~~efd~~~~~-~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~ 392 (578)
.......+....... ........... ......+.++++|+|+|+|++|.++|++... ...+..++.++.+++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~-~~~~~~~~a~~~~i~ 228 (255)
T PLN02965 153 HYYYNQSPLEDYTLSSKLLRPAPVRAFQDL---DKLPPNPEAEKVPRVYIKTAKDNLFDPVRQD-VMVENWPPAQTYVLE 228 (255)
T ss_pred HHHhcCCCHHHHHHHHHhcCCCCCcchhhh---hhccchhhcCCCCEEEEEcCCCCCCCHHHHH-HHHHhCCcceEEEec
Confidence 000000000000000 00001111111 0112245679999999999999999986544 356778889999999
Q ss_pred CCCccccccccccCcccHHHHHHHHHHhh
Q 008093 393 HGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 393 ~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
++||+.++|. |+ .+.+.+.+|++.+
T Consensus 229 ~~GH~~~~e~--p~--~v~~~l~~~~~~~ 253 (255)
T PLN02965 229 DSDHSAFFSV--PT--TLFQYLLQAVSSL 253 (255)
T ss_pred CCCCchhhcC--HH--HHHHHHHHHHHHh
Confidence 9999999993 33 5899999998865
|
|
| >PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.6e-20 Score=183.89 Aligned_cols=231 Identities=13% Similarity=0.128 Sum_probs=129.1
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEE
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIG 239 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG 239 (578)
+|+||++||+++++ ..| +.++..+ .+|+|+++|+||||.|...... ......+|+.++++ ..+..+++++|
T Consensus 2 ~p~vvllHG~~~~~-~~w-~~~~~~l--~~~~vi~~D~~G~G~S~~~~~~-~~~~~~~~l~~~l~----~~~~~~~~lvG 72 (242)
T PRK11126 2 LPWLVFLHGLLGSG-QDW-QPVGEAL--PDYPRLYIDLPGHGGSAAISVD-GFADVSRLLSQTLQ----SYNILPYWLVG 72 (242)
T ss_pred CCEEEEECCCCCCh-HHH-HHHHHHc--CCCCEEEecCCCCCCCCCcccc-CHHHHHHHHHHHHH----HcCCCCeEEEE
Confidence 47799999996644 456 6777777 3799999999999999754321 11122344444444 34567999999
Q ss_pred EchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHH-HhHHHHHhhh--cccccccCCHHHH
Q 008093 240 TSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALT-IGLQDYAQLH--EPRYSRLANWEGI 316 (578)
Q Consensus 240 hSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~-~~l~~~~~~~--~~~l~~~~d~~~i 316 (578)
|||||.+++.++.++++. .|+++++++++...........+......+...+. ..+....... .+.+.. ...
T Consensus 73 ~S~Gg~va~~~a~~~~~~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--- 147 (242)
T PRK11126 73 YSLGGRIAMYYACQGLAG-GLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLEQVLADWYQQPVFAS-LNA--- 147 (242)
T ss_pred ECHHHHHHHHHHHhCCcc-cccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHHHHhcchhhc-cCc---
Confidence 999999999999998652 49999988766433221111100000000000000 0000000000 000000 000
Q ss_pred hccCCHHHHHhhhhhccCCCCCHHHHHHh------CCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEE
Q 008093 317 KKSRSIRDFDSHATCLVGKFETVDTYYRN------CSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLAT 390 (578)
Q Consensus 317 ~~~~s~~efd~~~~~~~~g~~~~~~yy~~------~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~ 390 (578)
.....+..... ...+ .....++.. ......+.++++|+++|+|++|+.+. . ... ..+.++.+
T Consensus 148 ---~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~-~~~-~~~~~~~~ 215 (242)
T PRK11126 148 ---EQRQQLVAKRS-NNNG-AAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----A-LAQ-QLALPLHV 215 (242)
T ss_pred ---cHHHHHHHhcc-cCCH-HHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----H-HHH-HhcCeEEE
Confidence 00000000000 0000 011112111 11224678899999999999998652 1 122 23789999
Q ss_pred eCCCCccccccccccCcccHHHHHHHHHHh
Q 008093 391 TWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 391 ~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
++++||+.++|. +..+.+.|.+|++.
T Consensus 216 i~~~gH~~~~e~----p~~~~~~i~~fl~~ 241 (242)
T PRK11126 216 IPNAGHNAHREN----PAAFAASLAQILRL 241 (242)
T ss_pred eCCCCCchhhhC----hHHHHHHHHHHHhh
Confidence 999999999983 34689999999875
|
|
| >PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.2e-19 Score=196.65 Aligned_cols=252 Identities=13% Similarity=0.158 Sum_probs=135.2
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHH---hCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHH-HHHHHHCCCC
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTA---KRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVI-GYLHHEYPKA 233 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~---~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i-~~l~~~~~~~ 233 (578)
+.+|+|||+||++++. ..|-..+...+. +.+|+|+++|+||||.|+......|. .++..+.+ ..+.+..+..
T Consensus 199 ~~k~~VVLlHG~~~s~-~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~yt---l~~~a~~l~~~ll~~lg~~ 274 (481)
T PLN03087 199 KAKEDVLFIHGFISSS-AFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYT---LREHLEMIERSVLERYKVK 274 (481)
T ss_pred CCCCeEEEECCCCccH-HHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCC---HHHHHHHHHHHHHHHcCCC
Confidence 3457899999996544 444223334444 47999999999999999754333332 22333333 2344455667
Q ss_pred cEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHH-----HHHH-HHHhHHHHHhhhcccc
Q 008093 234 PLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKI-----YDRA-LTIGLQDYAQLHEPRY 307 (578)
Q Consensus 234 ~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~-----~~~~-l~~~l~~~~~~~~~~l 307 (578)
+++++||||||.+++.++..+|+ +|+++|+++++.................. +... +...............
T Consensus 275 k~~LVGhSmGG~iAl~~A~~~Pe--~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 352 (481)
T PLN03087 275 SFHIVAHSLGCILALALAVKHPG--AVKSLTLLAPPYYPVPKGVQATQYVMRKVAPRRVWPPIAFGASVACWYEHISRTI 352 (481)
T ss_pred CEEEEEECHHHHHHHHHHHhChH--hccEEEEECCCccccccchhHHHHHHHHhcccccCCccccchhHHHHHHHHHhhh
Confidence 99999999999999999999998 89999999986543221100000000000 0000 0000000000000000
Q ss_pred c----c-cCCHHHH---hccCCHHHH-Hhhhhhcc--CCCCCHHHHHHh------CCcccccCCCccceEEEEeCCCCCC
Q 008093 308 S----R-LANWEGI---KKSRSIRDF-DSHATCLV--GKFETVDTYYRN------CSSSTYVGNVSIPLLCISSLDDPVC 370 (578)
Q Consensus 308 ~----~-~~d~~~i---~~~~s~~ef-d~~~~~~~--~g~~~~~~yy~~------~s~~~~l~~I~vPvLiI~g~dDpiv 370 (578)
. . ...++.+ .....+..+ .+.+.... ..+.....+... ......+.+|++|+|+|+|++|+++
T Consensus 353 ~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l~~l~~~I~vPtLII~Ge~D~iv 432 (481)
T PLN03087 353 CLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYLDHVRDQLKCDVAIFHGGDDELI 432 (481)
T ss_pred hcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhHHHHHHHhCCCCEEEEEECCCCCC
Confidence 0 0 0000000 000000000 00000000 000000000000 0001123478999999999999999
Q ss_pred CCCCcchHHHhcCCCEEEEEeCCCCccccc-cccccCcccHHHHHHHHHHh
Q 008093 371 TVEAIPWDECRANKNVVLATTWHGGHLAFF-EGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 371 p~~~~~~~~~~~~~~~~l~~~~~GGH~~~~-eg~~~~~~w~~~~v~eFL~~ 420 (578)
|.+.... .....+++++.+++++||+.++ | ++..+.+.+.+|.+.
T Consensus 433 P~~~~~~-la~~iP~a~l~vI~~aGH~~~v~e----~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 433 PVECSYA-VKAKVPRARVKVIDDKDHITIVVG----RQKEFARELEEIWRR 478 (481)
T ss_pred CHHHHHH-HHHhCCCCEEEEeCCCCCcchhhc----CHHHHHHHHHHHhhc
Confidence 9886654 4667789999999999999986 5 234688888888753
|
|
| >PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.8e-20 Score=177.88 Aligned_cols=218 Identities=20% Similarity=0.249 Sum_probs=125.1
Q ss_pred EEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEch
Q 008093 163 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSI 242 (578)
Q Consensus 163 VVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSm 242 (578)
||++||++++. ..| ..+++.|. +||+|+++|+||+|.|+.... .....+.+++.++.+.+ +.....+++++|||+
T Consensus 1 vv~~hG~~~~~-~~~-~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~~l~~~l-~~~~~~~~~lvG~S~ 75 (228)
T PF12697_consen 1 VVFLHGFGGSS-ESW-DPLAEALA-RGYRVIAFDLPGHGRSDPPPD-YSPYSIEDYAEDLAELL-DALGIKKVILVGHSM 75 (228)
T ss_dssp EEEE-STTTTG-GGG-HHHHHHHH-TTSEEEEEECTTSTTSSSHSS-GSGGSHHHHHHHHHHHH-HHTTTSSEEEEEETH
T ss_pred eEEECCCCCCH-HHH-HHHHHHHh-CCCEEEEEecCCccccccccc-cCCcchhhhhhhhhhcc-ccccccccccccccc
Confidence 68999996544 455 67888884 799999999999999976542 11122222223333333 333346899999999
Q ss_pred HHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhh--HHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccC
Q 008093 243 GANILVKYLGEEGEKTPVAGAAAICSPWDLLIGD--RFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSR 320 (578)
Q Consensus 243 GG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~--~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~ 320 (578)
||.+++.++..+|+ +|+++|+++++....... ... ......+...... .........................
T Consensus 76 Gg~~a~~~a~~~p~--~v~~~vl~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~- 150 (228)
T PF12697_consen 76 GGMIALRLAARYPD--RVKGLVLLSPPPPLPDSPSRSFG-PSFIRRLLAWRSR-SLRRLASRFFYRWFDGDEPEDLIRS- 150 (228)
T ss_dssp HHHHHHHHHHHSGG--GEEEEEEESESSSHHHHHCHHHH-HHHHHHHHHHHHH-HHHHHHHHHHHHHHTHHHHHHHHHH-
T ss_pred cccccccccccccc--ccccceeeccccccccccccccc-chhhhhhhhcccc-ccccccccccccccccccccccccc-
Confidence 99999999999988 899999999887654322 111 1111111111000 0000000000000000000000000
Q ss_pred CHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccc
Q 008093 321 SIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFF 400 (578)
Q Consensus 321 s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~ 400 (578)
....+.+.+... +........++++++|+++++|++|++++.+.... .....+++++.+++++||+.++
T Consensus 151 ~~~~~~~~~~~~----------~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~-~~~~~~~~~~~~~~~~gH~~~~ 219 (228)
T PF12697_consen 151 SRRALAEYLRSN----------LWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEE-LADKLPNAELVVIPGAGHFLFL 219 (228)
T ss_dssp HHHHHHHHHHHH----------HHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHH-HHHHSTTEEEEEETTSSSTHHH
T ss_pred cccccccccccc----------cccccccccccccCCCeEEeecCCCCCCCHHHHHH-HHHHCCCCEEEEECCCCCccHH
Confidence 000000000000 01112235667789999999999999999554433 4456789999999999999999
Q ss_pred c
Q 008093 401 E 401 (578)
Q Consensus 401 e 401 (578)
|
T Consensus 220 ~ 220 (228)
T PF12697_consen 220 E 220 (228)
T ss_dssp H
T ss_pred H
Confidence 8
|
... |
| >PLN02578 hydrolase | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.3e-20 Score=193.33 Aligned_cols=243 Identities=19% Similarity=0.184 Sum_probs=136.7
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEE
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIG 239 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG 239 (578)
+|.||++||+++ +...| +.++..|.+ +|+|+++|+||||.|+..........+.+|+.++++.+. ..+++++|
T Consensus 86 g~~vvliHG~~~-~~~~w-~~~~~~l~~-~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~~~~----~~~~~lvG 158 (354)
T PLN02578 86 GLPIVLIHGFGA-SAFHW-RYNIPELAK-KYKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVKEVV----KEPAVLVG 158 (354)
T ss_pred CCeEEEECCCCC-CHHHH-HHHHHHHhc-CCEEEEECCCCCCCCCCcccccCHHHHHHHHHHHHHHhc----cCCeEEEE
Confidence 356899999955 44445 566777764 699999999999999765322222234456666666553 35899999
Q ss_pred EchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhH-----------HHhhHHH---HHHHHHHHHHhHHHHHhhhcc
Q 008093 240 TSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDR-----------FIGRRLI---QKIYDRALTIGLQDYAQLHEP 305 (578)
Q Consensus 240 hSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~-----------~l~~~~~---~~~~~~~l~~~l~~~~~~~~~ 305 (578)
|||||.+++.+|.++|+ +++++|+++++........ ....... ...+.+.....+. .......
T Consensus 159 ~S~Gg~ia~~~A~~~p~--~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 235 (354)
T PLN02578 159 NSLGGFTALSTAVGYPE--LVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVLGFLF-WQAKQPS 235 (354)
T ss_pred ECHHHHHHHHHHHhChH--hcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHHHHHHH-HHhcCHH
Confidence 99999999999999998 8999999986532211100 0000000 0011110000000 0000000
Q ss_pred cccccCCHHHHhccCCHHHH-HhhhhhccCCCCCHHHHHHh----------CCcccccCCCccceEEEEeCCCCCCCCCC
Q 008093 306 RYSRLANWEGIKKSRSIRDF-DSHATCLVGKFETVDTYYRN----------CSSSTYVGNVSIPLLCISSLDDPVCTVEA 374 (578)
Q Consensus 306 ~l~~~~d~~~i~~~~s~~ef-d~~~~~~~~g~~~~~~yy~~----------~s~~~~l~~I~vPvLiI~g~dDpivp~~~ 374 (578)
.+.... ...........++ .+.+............+++. ......++++++|+|+|+|++|+++|.+.
T Consensus 236 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~v~~~~ 314 (354)
T PLN02578 236 RIESVL-KSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPLLLLWGDLDPWVGPAK 314 (354)
T ss_pred HHHHHH-HHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCCEEEEEeCCCCCCCHHH
Confidence 000000 0000000000011 11111111111111122111 11224578899999999999999998875
Q ss_pred cchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHH
Q 008093 375 IPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 375 ~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
... .....++.+++++ ++||+.+.|. +..+.+.|.+|++
T Consensus 315 ~~~-l~~~~p~a~l~~i-~~GH~~~~e~----p~~~~~~I~~fl~ 353 (354)
T PLN02578 315 AEK-IKAFYPDTTLVNL-QAGHCPHDEV----PEQVNKALLEWLS 353 (354)
T ss_pred HHH-HHHhCCCCEEEEe-CCCCCccccC----HHHHHHHHHHHHh
Confidence 543 4555678888888 5899999983 3469999999986
|
|
| >KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.3e-20 Score=183.91 Aligned_cols=250 Identities=18% Similarity=0.143 Sum_probs=153.7
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCC-CCCC-CCchHHHHHHHHHHHHHCCCCcE
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSD-CFYN-AGWTEDAREVIGYLHHEYPKAPL 235 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~-~~~~-~~~~~Dl~~~i~~l~~~~~~~~i 235 (578)
...|+|+++||+.- +...| +.....|+.+||+|+++|+||+|.|+.+.. ..|+ .....|+..+++++. .+++
T Consensus 42 ~~gP~illlHGfPe-~wysw-r~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld~Lg----~~k~ 115 (322)
T KOG4178|consen 42 GDGPIVLLLHGFPE-SWYSW-RHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVALLDHLG----LKKA 115 (322)
T ss_pred CCCCEEEEEccCCc-cchhh-hhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHHHHHhc----ccee
Confidence 57899999999964 44445 788899999999999999999999987644 3333 233468888888776 5699
Q ss_pred EEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchh---hhhHHHh-------------hHHHHHHHHHHHHHhHHHH
Q 008093 236 FAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL---IGDRFIG-------------RRLIQKIYDRALTIGLQDY 299 (578)
Q Consensus 236 ~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~---~~~~~l~-------------~~~~~~~~~~~l~~~l~~~ 299 (578)
+++||+|||.+++.++..+|+ +|+|+|+++.+.... ....... .......+.+...+.+...
T Consensus 116 ~lvgHDwGaivaw~la~~~Pe--rv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~E~~~s~~~~~~~~~~ 193 (322)
T KOG4178|consen 116 FLVGHDWGAIVAWRLALFYPE--RVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPGKPETELSKDDTEMLVKT 193 (322)
T ss_pred EEEeccchhHHHHHHHHhChh--hcceEEEecCCCCCcccchhhhhccccCccceeEeccccCcchhhhccchhHHhHHh
Confidence 999999999999999999999 999999999876510 0000000 0000111111111111111
Q ss_pred HhhhcccccccCC----HH-HHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCc-----ccccCCCccceEEEEeCCCCC
Q 008093 300 AQLHEPRYSRLAN----WE-GIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSS-----STYVGNVSIPLLCISSLDDPV 369 (578)
Q Consensus 300 ~~~~~~~l~~~~d----~~-~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~-----~~~l~~I~vPvLiI~g~dDpi 369 (578)
............+ .. .......+.-++..+ ...|+...-+||+.... ...+.+|++|+++|+|..|++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f--~~~g~~gplNyyrn~~r~w~a~~~~~~~i~iPv~fi~G~~D~v 271 (322)
T KOG4178|consen 194 FRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKF--QIDGFTGPLNYYRNFRRNWEAAPWALAKITIPVLFIWGDLDPV 271 (322)
T ss_pred hhccccCCccccCCCCCCccchhhHHHHHHHHhcc--ccccccccchhhHHHhhCchhccccccccccceEEEEecCccc
Confidence 1100000000000 00 000001111122221 22334444455554322 346788999999999999999
Q ss_pred CCCCCcchHHHhcCCCE-EEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 370 CTVEAIPWDECRANKNV-VLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 370 vp~~~~~~~~~~~~~~~-~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
.+.........+..++. +.++++++||+...|. +..+++.+.+|+++.
T Consensus 272 ~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~----p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 272 LPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEK----PQEVNQAILGFINSF 320 (322)
T ss_pred ccchhHHHHHHHhhccccceEEecCCcccccccC----HHHHHHHHHHHHHhh
Confidence 98762222233344444 7789999999998883 346999999999875
|
|
| >PRK06489 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.5e-19 Score=189.64 Aligned_cols=252 Identities=14% Similarity=0.118 Sum_probs=135.3
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHH-------HhCCceEEEEeCCCCCCCCCCCCCC----CCCCchHHHH-HHHHHHH
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNT-------AKRGWNVVVSNHRGLGGVSITSDCF----YNAGWTEDAR-EVIGYLH 227 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l-------~~~Gy~Vvv~D~RG~G~S~~~~~~~----~~~~~~~Dl~-~~i~~l~ 227 (578)
+|+|||+||+++++..++...+...+ ..++|+|+++|+||||.|+...... .... .+|+. +++..+.
T Consensus 69 gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~-~~~~a~~~~~~l~ 147 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGLRAAFPRYD-YDDMVEAQYRLVT 147 (360)
T ss_pred CCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCCCCCCCccc-HHHHHHHHHHHHH
Confidence 57899999997655443212344443 2468999999999999997543210 0111 23333 3334444
Q ss_pred HHCCCCcEE-EEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHH----------HHhH
Q 008093 228 HEYPKAPLF-AIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRAL----------TIGL 296 (578)
Q Consensus 228 ~~~~~~~i~-lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l----------~~~l 296 (578)
+..+..++. ++||||||++++.++.++|+ +|+++|++++........................ ...+
T Consensus 148 ~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~--~V~~LVLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (360)
T PRK06489 148 EGLGVKHLRLILGTSMGGMHAWMWGEKYPD--FMDALMPMASQPTEMSGRNWMWRRMLIESIRNDPAWNNGNYTTQPPSL 225 (360)
T ss_pred HhcCCCceeEEEEECHHHHHHHHHHHhCch--hhheeeeeccCcccccHHHHHHHHHHHHHHHhCCCCCCCCCCCCHHHH
Confidence 444555764 89999999999999999999 8999999986421111000000000000000000 0000
Q ss_pred HHHHhhhcccccccCCHHHHhccCC---HH-HHHhhhhhccCCCCCHHHHHH------hCCcccccCCCccceEEEEeCC
Q 008093 297 QDYAQLHEPRYSRLANWEGIKKSRS---IR-DFDSHATCLVGKFETVDTYYR------NCSSSTYVGNVSIPLLCISSLD 366 (578)
Q Consensus 297 ~~~~~~~~~~l~~~~d~~~i~~~~s---~~-efd~~~~~~~~g~~~~~~yy~------~~s~~~~l~~I~vPvLiI~g~d 366 (578)
........ .+.............. .. .++...... .. .....+.. ..+....+.+|++|+|+|+|++
T Consensus 226 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~d~~~~L~~I~~PvLvI~G~~ 302 (360)
T PRK06489 226 KRANPMFA-IATSGGTLAYQAQAPTRAAADKLVDERLAAP-VT-ADANDFLYQWDSSRDYNPSPDLEKIKAPVLAINSAD 302 (360)
T ss_pred HHHHHHHH-HHHhCCHHHHHHhcCChHHHHHHHHHHHHhh-hh-cCHHHHHHHHHHhhccChHHHHHhCCCCEEEEecCC
Confidence 00000000 0000000000000000 00 001100000 00 01112211 1122356789999999999999
Q ss_pred CCCCCCCCc-chHHHhcCCCEEEEEeCCC----CccccccccccCcccHHHHHHHHHHhhc
Q 008093 367 DPVCTVEAI-PWDECRANKNVVLATTWHG----GHLAFFEGLTAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 367 Dpivp~~~~-~~~~~~~~~~~~l~~~~~G----GH~~~~eg~~~~~~w~~~~v~eFL~~~~ 422 (578)
|+++|.+.. .....+..++.++++++++ ||+.+ | .|+ .+++.|.+||+.+.
T Consensus 303 D~~~p~~~~~~~~la~~ip~a~l~~i~~a~~~~GH~~~-e--~P~--~~~~~i~~FL~~~~ 358 (360)
T PRK06489 303 DERNPPETGVMEAALKRVKHGRLVLIPASPETRGHGTT-G--SAK--FWKAYLAEFLAQVP 358 (360)
T ss_pred CcccChhhHHHHHHHHhCcCCeEEEECCCCCCCCcccc-c--CHH--HHHHHHHHHHHhcc
Confidence 999998753 1335667889999999985 99986 6 243 59999999998764
|
|
| >PRK03204 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.7e-19 Score=181.00 Aligned_cols=239 Identities=12% Similarity=0.056 Sum_probs=132.8
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEE
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIG 239 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG 239 (578)
+|+|||+||+. .+...| +.++..|.+ +|+|+++|+||||.|+......+ ..+|..+.+..+.+..+..+++++|
T Consensus 34 ~~~iv~lHG~~-~~~~~~-~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~lvG 107 (286)
T PRK03204 34 GPPILLCHGNP-TWSFLY-RDIIVALRD-RFRCVAPDYLGFGLSERPSGFGY---QIDEHARVIGEFVDHLGLDRYLSMG 107 (286)
T ss_pred CCEEEEECCCC-ccHHHH-HHHHHHHhC-CcEEEEECCCCCCCCCCCCcccc---CHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 46799999995 344445 667777754 69999999999999975432222 2355555555555556667899999
Q ss_pred EchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHH-----H-HHHH-h-HHHHHhhhcccccccC
Q 008093 240 TSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYD-----R-ALTI-G-LQDYAQLHEPRYSRLA 311 (578)
Q Consensus 240 hSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~-----~-~l~~-~-l~~~~~~~~~~l~~~~ 311 (578)
|||||.+++.++..+|+ +|+++|+++++.-...... .......+. . .+.. . ..+.... ......
T Consensus 108 ~S~Gg~va~~~a~~~p~--~v~~lvl~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 179 (286)
T PRK03204 108 QDWGGPISMAVAVERAD--RVRGVVLGNTWFWPADTLA---MKAFSRVMSSPPVQYAILRRNFFVERLIPA---GTEHRP 179 (286)
T ss_pred ECccHHHHHHHHHhChh--heeEEEEECccccCCCchh---HHHHHHHhccccchhhhhhhhHHHHHhccc---cccCCC
Confidence 99999999999999988 8999998876531110000 000000000 0 0000 0 0000000 000000
Q ss_pred CHHHHh---ccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCC--CccceEEEEeCCCCCCCCCCcchHHHhcCCCE
Q 008093 312 NWEGIK---KSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGN--VSIPLLCISSLDDPVCTVEAIPWDECRANKNV 386 (578)
Q Consensus 312 d~~~i~---~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~--I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~ 386 (578)
+...+. ......+...........+.......... ...+.+ +++|+|+|+|++|.++++........+..++.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~~~~~ip~~ 257 (286)
T PRK03204 180 SSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARL--AREVPATLGTKPTLLVWGMKDVAFRPKTILPRLRATFPDH 257 (286)
T ss_pred CHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHh--hhhhhhhcCCCCeEEEecCCCcccCcHHHHHHHHHhcCCC
Confidence 000000 00000000000000000000000000000 011111 38999999999999987654333456678899
Q ss_pred EEEEeCCCCccccccccccCcccHHHHHHHHH
Q 008093 387 VLATTWHGGHLAFFEGLTAAGMWWVRAVNEYL 418 (578)
Q Consensus 387 ~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL 418 (578)
++.+++++||+.++|. |+ .+.+.+.+||
T Consensus 258 ~~~~i~~aGH~~~~e~--Pe--~~~~~i~~~~ 285 (286)
T PRK03204 258 VLVELPNAKHFIQEDA--PD--RIAAAIIERF 285 (286)
T ss_pred eEEEcCCCcccccccC--HH--HHHHHHHHhc
Confidence 9999999999999983 43 5888888886
|
|
| >PRK07581 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.4e-19 Score=188.01 Aligned_cols=254 Identities=16% Similarity=0.115 Sum_probs=139.8
Q ss_pred CCcEEEEECCCCCCCccHHHHHHH---HHHHhCCceEEEEeCCCCCCCCCCCC--CCCCC------CchHHHHHHHHHHH
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLV---FNTAKRGWNVVVSNHRGLGGVSITSD--CFYNA------GWTEDAREVIGYLH 227 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~---~~l~~~Gy~Vvv~D~RG~G~S~~~~~--~~~~~------~~~~Dl~~~i~~l~ 227 (578)
..|+||++||+++++.. + ..++ ..+...+|+|+++|+||||.|..... ..|+. ...+|+.+....+.
T Consensus 40 ~~~~vll~~~~~~~~~~-~-~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 117 (339)
T PRK07581 40 KDNAILYPTWYSGTHQD-N-EWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLT 117 (339)
T ss_pred CCCEEEEeCCCCCCccc-c-hhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHH
Confidence 34678788887554433 3 2232 35556789999999999999865422 11221 23577777555565
Q ss_pred HHCCCCc-EEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHH----------HHHHHhH
Q 008093 228 HEYPKAP-LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYD----------RALTIGL 296 (578)
Q Consensus 228 ~~~~~~~-i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~----------~~l~~~l 296 (578)
+..+..+ .++|||||||.+++.++..+|+ +|+++|++++............+.....+.. ......+
T Consensus 118 ~~lgi~~~~~lvG~S~GG~va~~~a~~~P~--~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 195 (339)
T PRK07581 118 EKFGIERLALVVGWSMGAQQTYHWAVRYPD--MVERAAPIAGTAKTTPHNFVFLEGLKAALTADPAFNGGWYAEPPERGL 195 (339)
T ss_pred HHhCCCceEEEEEeCHHHHHHHHHHHHCHH--HHhhheeeecCCCCCHHHHHHHHHHHHHHHhCCCCCCCCCCCcHHHHH
Confidence 5556678 5799999999999999999999 8999999986543211111000000000000 0000000
Q ss_pred HHHHhhh-----cccccccCCHHHHhccCCHHHHH-hhhhhcc--CCCCCHHHHH---H------h----CCcccccCCC
Q 008093 297 QDYAQLH-----EPRYSRLANWEGIKKSRSIRDFD-SHATCLV--GKFETVDTYY---R------N----CSSSTYVGNV 355 (578)
Q Consensus 297 ~~~~~~~-----~~~l~~~~d~~~i~~~~s~~efd-~~~~~~~--~g~~~~~~yy---~------~----~s~~~~l~~I 355 (578)
....... .+.+.....+... ......+.. ....... .........+ . . ......+.+|
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~L~~I 274 (339)
T PRK07581 196 RAHARVYAGWGFSQAFYRQELWRAM-GYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDISRNPAYGGDLAAALGSI 274 (339)
T ss_pred HHHHHHHHHHHhHHHHHHhhhcccc-ChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccccCcccCCCHHHHHhcC
Confidence 0000000 0000000000000 000000000 0000000 0000111110 0 0 0123467889
Q ss_pred ccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCC-CCccccccccccCcccHHHHHHHHHHhhc
Q 008093 356 SIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWH-GGHLAFFEGLTAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 356 ~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~-GGH~~~~eg~~~~~~w~~~~v~eFL~~~~ 422 (578)
++|+|+|+|++|.++|.+.... ..+..++.++.++++ +||+.++|. ...+.+.|.+||+++.
T Consensus 275 ~~PtLvI~G~~D~~~p~~~~~~-l~~~ip~a~l~~i~~~~GH~~~~~~----~~~~~~~~~~~~~~~~ 337 (339)
T PRK07581 275 TAKTFVMPISTDLYFPPEDCEA-EAALIPNAELRPIESIWGHLAGFGQ----NPADIAFIDAALKELL 337 (339)
T ss_pred CCCEEEEEeCCCCCCCHHHHHH-HHHhCCCCeEEEeCCCCCccccccC----cHHHHHHHHHHHHHHH
Confidence 9999999999999999875543 456678899999998 899999983 3368899999999875
|
|
| >TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.5e-18 Score=179.61 Aligned_cols=126 Identities=14% Similarity=0.095 Sum_probs=88.5
Q ss_pred eEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCC
Q 008093 121 RRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGL 200 (578)
Q Consensus 121 ~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~ 200 (578)
....+...||..+.+.-.. .+..+.||++||+.++.... .+...+...+|+|+++|+|||
T Consensus 5 ~~~~~~~~~~~~l~y~~~g-----------------~~~~~~lvllHG~~~~~~~~---~~~~~~~~~~~~vi~~D~~G~ 64 (306)
T TIGR01249 5 VSGYLNVSDNHQLYYEQSG-----------------NPDGKPVVFLHGGPGSGTDP---GCRRFFDPETYRIVLFDQRGC 64 (306)
T ss_pred cCCeEEcCCCcEEEEEECc-----------------CCCCCEEEEECCCCCCCCCH---HHHhccCccCCEEEEECCCCC
Confidence 4467888888888753211 12245689999986654432 233445457899999999999
Q ss_pred CCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 201 GGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 201 G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
|.|+.... .+ ....+|+.+.+..+.+..+..+++++||||||.+++.++.++|+ +++++|++++..
T Consensus 65 G~S~~~~~-~~-~~~~~~~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~--~v~~lvl~~~~~ 130 (306)
T TIGR01249 65 GKSTPHAC-LE-ENTTWDLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPE--VVTGLVLRGIFL 130 (306)
T ss_pred CCCCCCCC-cc-cCCHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChH--hhhhheeecccc
Confidence 99974421 11 12234555555555555566689999999999999999999988 799999987643
|
This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members. |
| >PLN02894 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.81 E-value=7.5e-18 Score=180.75 Aligned_cols=260 Identities=13% Similarity=0.108 Sum_probs=136.9
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCch-HHHHHHHHHHHHHCCCCcEE
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWT-EDAREVIGYLHHEYPKAPLF 236 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~-~Dl~~~i~~l~~~~~~~~i~ 236 (578)
..+|+||++||+++ +...| ...+..|.+ +|+|+++|+||||.|+............ +++.+.+....+..+..+++
T Consensus 103 ~~~p~vvllHG~~~-~~~~~-~~~~~~L~~-~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~ 179 (402)
T PLN02894 103 EDAPTLVMVHGYGA-SQGFF-FRNFDALAS-RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLSNFI 179 (402)
T ss_pred CCCCEEEEECCCCc-chhHH-HHHHHHHHh-CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHcCCCCeE
Confidence 45689999999955 44445 345566765 6999999999999986532111111111 12222222222333556899
Q ss_pred EEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhH---HHhh---HHHHHHHHHH---------HHHhHH----
Q 008093 237 AIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDR---FIGR---RLIQKIYDRA---------LTIGLQ---- 297 (578)
Q Consensus 237 lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~---~l~~---~~~~~~~~~~---------l~~~l~---- 297 (578)
++||||||.+++.++.++++ +|+++|+++++........ .... .+...+.... +...+.
T Consensus 180 lvGhS~GG~la~~~a~~~p~--~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gp~~~ 257 (402)
T PLN02894 180 LLGHSFGGYVAAKYALKHPE--HVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKIIRGLGPWGP 257 (402)
T ss_pred EEEECHHHHHHHHHHHhCch--hhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHHHhccchhH
Confidence 99999999999999999988 8999999986432111110 0000 0000000000 000000
Q ss_pred HHHhhhc-ccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHH---HH------HHhCCcccccCCCccceEEEEeCCC
Q 008093 298 DYAQLHE-PRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVD---TY------YRNCSSSTYVGNVSIPLLCISSLDD 367 (578)
Q Consensus 298 ~~~~~~~-~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~---~y------y~~~s~~~~l~~I~vPvLiI~g~dD 367 (578)
....... ..+........+. ......+.+.+......-.+.. .+ .........+.+|++|+++|+|++|
T Consensus 258 ~l~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~liI~G~~D 336 (402)
T PLN02894 258 NLVRRYTTARFGAHSTGDILS-EEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKVPTTFIYGRHD 336 (402)
T ss_pred HHHHHHHHHHhhhcccccccC-cchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCCCEEEEEeCCC
Confidence 0000000 0000000000000 0000111111100000000000 00 0111223457889999999999999
Q ss_pred CCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcCCCccc
Q 008093 368 PVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSSPYMH 428 (578)
Q Consensus 368 pivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~~~~~~ 428 (578)
.+.+.... ........++++.+++++||+.+.|. |+ .+++.|.+|++.+....+.+
T Consensus 337 ~i~~~~~~-~~~~~~~~~~~~~~i~~aGH~~~~E~--P~--~f~~~l~~~~~~~~~~~~~~ 392 (402)
T PLN02894 337 WMNYEGAV-EARKRMKVPCEIIRVPQGGHFVFLDN--PS--GFHSAVLYACRKYLSPDREE 392 (402)
T ss_pred CCCcHHHH-HHHHHcCCCCcEEEeCCCCCeeeccC--HH--HHHHHHHHHHHHhccCCchh
Confidence 87764322 22233345688999999999999993 33 59999999999988765443
|
|
| >PRK05077 frsA fermentation/respiration switch protein; Reviewed | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.8e-18 Score=181.97 Aligned_cols=244 Identities=16% Similarity=0.121 Sum_probs=151.7
Q ss_pred CCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeC
Q 008093 118 FSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 197 (578)
Q Consensus 118 ~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~ 197 (578)
.+.++..++..||.++...++.|.. +.+.|+||++||+.+ ..+.++..++..|+++||+|+++|+
T Consensus 166 ~~~e~v~i~~~~g~~l~g~l~~P~~--------------~~~~P~Vli~gG~~~-~~~~~~~~~~~~La~~Gy~vl~~D~ 230 (414)
T PRK05077 166 GELKELEFPIPGGGPITGFLHLPKG--------------DGPFPTVLVCGGLDS-LQTDYYRLFRDYLAPRGIAMLTIDM 230 (414)
T ss_pred CceEEEEEEcCCCcEEEEEEEECCC--------------CCCccEEEEeCCccc-chhhhHHHHHHHHHhCCCEEEEECC
Confidence 4567778888888788776665532 246788888888843 3333336788899999999999999
Q ss_pred CCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhh
Q 008093 198 RGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIG 275 (578)
Q Consensus 198 RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~ 275 (578)
||+|.|.... ..........++++++.... +..+++++||||||+++++++..+++ +|+++|+++++.+....
T Consensus 231 pG~G~s~~~~---~~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~--ri~a~V~~~~~~~~~~~ 305 (414)
T PRK05077 231 PSVGFSSKWK---LTQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPP--RLKAVACLGPVVHTLLT 305 (414)
T ss_pred CCCCCCCCCC---ccccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCc--CceEEEEECCccchhhc
Confidence 9999985431 11122233457788887653 45689999999999999999998887 89999999988753211
Q ss_pred hHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccc-cCC
Q 008093 276 DRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTY-VGN 354 (578)
Q Consensus 276 ~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~-l~~ 354 (578)
........ ...+...+. ... . . ...+.+ .+...+ ..+... .... ..+
T Consensus 306 ~~~~~~~~-p~~~~~~la----~~l---g--~-~~~~~~---------~l~~~l----~~~sl~--------~~~~l~~~ 353 (414)
T PRK05077 306 DPKRQQQV-PEMYLDVLA----SRL---G--M-HDASDE---------ALRVEL----NRYSLK--------VQGLLGRR 353 (414)
T ss_pred chhhhhhc-hHHHHHHHH----HHh---C--C-CCCChH---------HHHHHh----hhccch--------hhhhhccC
Confidence 11000000 000111010 000 0 0 000111 111110 001000 0011 257
Q ss_pred CccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 355 VSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 355 I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
+++|+|+|+|++|+++|.+.... .....++.++++++++. .+++ ...+.+.+.+||+..
T Consensus 354 i~~PvLiI~G~~D~ivP~~~a~~-l~~~~~~~~l~~i~~~~---~~e~----~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 354 CPTPMLSGYWKNDPFSPEEDSRL-IASSSADGKLLEIPFKP---VYRN----FDKALQEISDWLEDR 412 (414)
T ss_pred CCCcEEEEecCCCCCCCHHHHHH-HHHhCCCCeEEEccCCC---ccCC----HHHHHHHHHHHHHHH
Confidence 99999999999999999886653 34567888999999863 3342 235888999998764
|
|
| >KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.9e-18 Score=171.95 Aligned_cols=302 Identities=16% Similarity=0.141 Sum_probs=165.9
Q ss_pred cccCCCCCchh--HHHhhhhhhcCCCCCCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCC
Q 008093 93 YLVTPWLSSPH--IQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLT 170 (578)
Q Consensus 93 y~P~~wl~~gh--lQT~~~~~~~~~~~~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~ 170 (578)
+.|+.|+...+ ++++-...+. .-.++|..+.+.++++..+..--... ....++.+|++||++
T Consensus 37 ~~~~~w~~~~~~~l~~~e~ril~-~~~v~~~~~~v~i~~~~~iw~~~~~~---------------~~~~~~plVliHGyG 100 (365)
T KOG4409|consen 37 WLPTLWCSTSRDQLKEAEKRILS-SVPVPYSKKYVRIPNGIEIWTITVSN---------------ESANKTPLVLIHGYG 100 (365)
T ss_pred cCCcccccchHHHHHHHHHhhhh-hcCCCcceeeeecCCCceeEEEeecc---------------cccCCCcEEEEeccc
Confidence 44555776544 6665433333 23578899999888665553211111 124455688999997
Q ss_pred CCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHH
Q 008093 171 SDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKY 250 (578)
Q Consensus 171 G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~y 250 (578)
++... |++.+ +.|++ .++|+++|++|+|.|+.+.=............+-++.-+...+-.+++++||||||+++..|
T Consensus 101 Ag~g~-f~~Nf-~~La~-~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~Y 177 (365)
T KOG4409|consen 101 AGLGL-FFRNF-DDLAK-IRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKY 177 (365)
T ss_pred hhHHH-HHHhh-hhhhh-cCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHH
Confidence 66554 43554 45555 79999999999999976532222223334566667777777777899999999999999999
Q ss_pred HhhcCCCCCccEEEEEcCCcchhhh--hHHHhhHHHHHHHHHHHHH--------hHHHHHhhhcccccccCCHHHHhccC
Q 008093 251 LGEEGEKTPVAGAAAICSPWDLLIG--DRFIGRRLIQKIYDRALTI--------GLQDYAQLHEPRYSRLANWEGIKKSR 320 (578)
Q Consensus 251 a~~~p~~~~V~~~Vlis~p~d~~~~--~~~l~~~~~~~~~~~~l~~--------~l~~~~~~~~~~l~~~~d~~~i~~~~ 320 (578)
|.++|+ +|..+|+++|..-.... ........ ...+ +.+.. .+.+......+.+....-.+...+..
T Consensus 178 AlKyPe--rV~kLiLvsP~Gf~~~~~~~~~~~~~~-~~w~-~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~ 253 (365)
T KOG4409|consen 178 ALKYPE--RVEKLILVSPWGFPEKPDSEPEFTKPP-PEWY-KALFLVATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFP 253 (365)
T ss_pred HHhChH--hhceEEEecccccccCCCcchhhcCCC-hHHH-hhhhhhhhcCCHHHHHHhccccchHHHhhhhHHHHHhcc
Confidence 999999 89999998763211100 00000000 0000 00000 00000000011111101111111111
Q ss_pred C--HHHH-HhhhhhccCCCCCHHHHHHh---------CCcccccCCCc--cceEEEEeCCCCCCCCCCcchHHHhcCCCE
Q 008093 321 S--IRDF-DSHATCLVGKFETVDTYYRN---------CSSSTYVGNVS--IPLLCISSLDDPVCTVEAIPWDECRANKNV 386 (578)
Q Consensus 321 s--~~ef-d~~~~~~~~g~~~~~~yy~~---------~s~~~~l~~I~--vPvLiI~g~dDpivp~~~~~~~~~~~~~~~ 386 (578)
+ ..++ .+++......-.+-+..+.. ....+.+..++ +|+++|+|++|-+--..............+
T Consensus 254 ~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l~~~~pv~fiyG~~dWmD~~~g~~~~~~~~~~~~ 333 (365)
T KOG4409|consen 254 SLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRLRELKKDVPVTFIYGDRDWMDKNAGLEVTKSLMKEYV 333 (365)
T ss_pred ccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHHHHhhccCCCEEEEecCcccccchhHHHHHHHhhcccc
Confidence 1 1111 11111111111111111111 11123344454 999999999996644433333223355678
Q ss_pred EEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 387 VLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 387 ~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
...+++++||..|++. |+ -+++.|.++++..
T Consensus 334 ~~~~v~~aGHhvylDn--p~--~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 334 EIIIVPGAGHHVYLDN--PE--FFNQIVLEECDKV 364 (365)
T ss_pred eEEEecCCCceeecCC--HH--HHHHHHHHHHhcc
Confidence 9999999999999984 43 5999999988753
|
|
| >KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.2e-18 Score=161.65 Aligned_cols=231 Identities=16% Similarity=0.220 Sum_probs=159.3
Q ss_pred CCCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEe
Q 008093 117 CFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSN 196 (578)
Q Consensus 117 ~~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D 196 (578)
+++|+|..+.++|..++...|... ..++|+++++||..|+..... ...--.+...+.+|+.++
T Consensus 51 n~pye~i~l~T~D~vtL~a~~~~~----------------E~S~pTlLyfh~NAGNmGhr~-~i~~~fy~~l~mnv~ivs 113 (300)
T KOG4391|consen 51 NMPYERIELRTRDKVTLDAYLMLS----------------ESSRPTLLYFHANAGNMGHRL-PIARVFYVNLKMNVLIVS 113 (300)
T ss_pred CCCceEEEEEcCcceeEeeeeecc----------------cCCCceEEEEccCCCcccchh-hHHHHHHHHcCceEEEEE
Confidence 479999999999999998766542 247899999999988655422 322234456789999999
Q ss_pred CCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhh
Q 008093 197 HRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLI 274 (578)
Q Consensus 197 ~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~ 274 (578)
+||+|.|++.+. ..|..-|.+++++|+..+. ..+++++.|.|+||.+++..|++..+ ++.++++-+.-.....
T Consensus 114 YRGYG~S~Gsps---E~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~--ri~~~ivENTF~SIp~ 188 (300)
T KOG4391|consen 114 YRGYGKSEGSPS---EEGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSD--RISAIIVENTFLSIPH 188 (300)
T ss_pred eeccccCCCCcc---ccceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchh--heeeeeeechhccchh
Confidence 999999987643 3567789999999998764 46789999999999999999999888 7888775533221100
Q ss_pred hhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCC
Q 008093 275 GDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGN 354 (578)
Q Consensus 275 ~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~ 354 (578)
..- ..+..+-. +.+..|. +++ .-.+...+.+
T Consensus 189 ~~i----~~v~p~~~------------------------------k~i~~lc---------~kn------~~~S~~ki~~ 219 (300)
T KOG4391|consen 189 MAI----PLVFPFPM------------------------------KYIPLLC---------YKN------KWLSYRKIGQ 219 (300)
T ss_pred hhh----heeccchh------------------------------hHHHHHH---------HHh------hhcchhhhcc
Confidence 000 00000000 0000000 000 1112345667
Q ss_pred CccceEEEEeCCCCCCCCCCcch-HHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcC
Q 008093 355 VSIPLLCISSLDDPVCTVEAIPW-DECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHS 423 (578)
Q Consensus 355 I~vPvLiI~g~dDpivp~~~~~~-~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~ 423 (578)
.++|.|+|.|..|.+||+..+.. ...-.+.+.++..+|+|.|..-.- .+. +.+++.+||.++..
T Consensus 220 ~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i---~dG--Yfq~i~dFlaE~~~ 284 (300)
T KOG4391|consen 220 CRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWI---CDG--YFQAIEDFLAEVVK 284 (300)
T ss_pred ccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccCceEE---ecc--HHHHHHHHHHHhcc
Confidence 78999999999999999976543 233345678899999999976443 122 67899999998765
|
|
| >KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.5e-18 Score=180.40 Aligned_cols=276 Identities=19% Similarity=0.175 Sum_probs=159.2
Q ss_pred eEEEEEecCCc-EEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhC-CceEEEEeCC
Q 008093 121 RRQLFRLSDGG-MIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKR-GWNVVVSNHR 198 (578)
Q Consensus 121 ~r~~l~~~DG~-~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~-Gy~Vvv~D~R 198 (578)
+...+..+.|. ++..-|...... -..+.+.++|.||++|||.+ +...| +..+..+.+. |++|+++|..
T Consensus 26 ~~~~i~~~~g~~~~~~~w~~~~~~--------~~~~~~~~~~pvlllHGF~~-~~~~w-~~~~~~L~~~~~~~v~aiDl~ 95 (326)
T KOG1454|consen 26 RSTSIEIPWGPLTIRSKWIPNLDK--------YGSPGDKDKPPVLLLHGFGA-SSFSW-RRVVPLLSKAKGLRVLAIDLP 95 (326)
T ss_pred cceEEEcccCCceeEEEEecccee--------ccCCCCCCCCcEEEeccccC-CcccH-hhhccccccccceEEEEEecC
Confidence 44556666664 777788765421 00011246778999999965 55455 6777777665 6999999999
Q ss_pred CCCC-CCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEE---EEcCCcchhh
Q 008093 199 GLGG-VSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAA---AICSPWDLLI 274 (578)
Q Consensus 199 G~G~-S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~V---lis~p~d~~~ 274 (578)
|+|. |+......|. ..+..+.+..+...+...+++++||||||.+++.+|+.+|+ .|+++| +++++.....
T Consensus 96 G~g~~s~~~~~~~y~---~~~~v~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~P~--~V~~lv~~~~~~~~~~~~~ 170 (326)
T KOG1454|consen 96 GHGYSSPLPRGPLYT---LRELVELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYYPE--TVDSLVLLDLLGPPVYSTP 170 (326)
T ss_pred CCCcCCCCCCCCcee---hhHHHHHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhCcc--cccceeeecccccccccCC
Confidence 9994 4433333232 35566666666666777789999999999999999999999 899999 6766654433
Q ss_pred hhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHH---HH-----hccCCHHHHHhhhhhcc--CCCC----CHH
Q 008093 275 GDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWE---GI-----KKSRSIRDFDSHATCLV--GKFE----TVD 340 (578)
Q Consensus 275 ~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~---~i-----~~~~s~~efd~~~~~~~--~g~~----~~~ 340 (578)
............+.... .+........+. ...... .+ ........+......+. ...+ +..
T Consensus 171 ~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (326)
T KOG1454|consen 171 KGIKGLRRLLDKFLSAL---ELLIPLSLTEPV--RLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLF 245 (326)
T ss_pred cchhHHHHhhhhhccHh---hhcCccccccch--hheeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEE
Confidence 22111111111110000 000000000000 000000 00 00001111111111100 0000 000
Q ss_pred HHHH--hCCcccccCCCc-cceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHH
Q 008093 341 TYYR--NCSSSTYVGNVS-IPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEY 417 (578)
Q Consensus 341 ~yy~--~~s~~~~l~~I~-vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eF 417 (578)
.+.. .......+.+|. +|+|+++|++|+++|.+.... ..+..+|.++.+++++||+.+.|. |+ .+++.+..|
T Consensus 246 ~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~-~~~~~pn~~~~~I~~~gH~~h~e~--Pe--~~~~~i~~F 320 (326)
T KOG1454|consen 246 LELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEE-LKKKLPNAELVEIPGAGHLPHLER--PE--EVAALLRSF 320 (326)
T ss_pred EeccCccchHHHhhccccCCceEEEEcCcCCccCHHHHHH-HHhhCCCceEEEeCCCCcccccCC--HH--HHHHHHHHH
Confidence 0000 112234567776 999999999999999984333 445569999999999999999982 43 589999999
Q ss_pred HHhh
Q 008093 418 LGVL 421 (578)
Q Consensus 418 L~~~ 421 (578)
+...
T Consensus 321 i~~~ 324 (326)
T KOG1454|consen 321 IARL 324 (326)
T ss_pred HHHh
Confidence 8865
|
|
| >PRK08775 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.3e-18 Score=183.03 Aligned_cols=232 Identities=12% Similarity=0.035 Sum_probs=123.7
Q ss_pred HHHHH---HHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCc-EEEEEEchHHHHHHHHHhhc
Q 008093 179 RHLVF---NTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAP-LFAIGTSIGANILVKYLGEE 254 (578)
Q Consensus 179 ~~l~~---~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~-i~lvGhSmGG~ial~ya~~~ 254 (578)
..++. .|...+|+|+++|+||||.|... ........+|+.++++.+. ..+ ++++||||||++++.++.++
T Consensus 86 ~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~~--~~~~~~~a~dl~~ll~~l~----l~~~~~lvG~SmGG~vA~~~A~~~ 159 (343)
T PRK08775 86 EGLVGSGRALDPARFRLLAFDFIGADGSLDV--PIDTADQADAIALLLDALG----IARLHAFVGYSYGALVGLQFASRH 159 (343)
T ss_pred hhccCCCCccCccccEEEEEeCCCCCCCCCC--CCCHHHHHHHHHHHHHHcC----CCcceEEEEECHHHHHHHHHHHHC
Confidence 55664 45445899999999999987432 1111234566666665543 334 57999999999999999999
Q ss_pred CCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHH-----------HHHHHHh--HHHH--HhhhcccccccCCHHHHhcc
Q 008093 255 GEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIY-----------DRALTIG--LQDY--AQLHEPRYSRLANWEGIKKS 319 (578)
Q Consensus 255 p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~-----------~~~l~~~--l~~~--~~~~~~~l~~~~d~~~i~~~ 319 (578)
|+ +|.++|++++............ ....... ....... +..+ .......+........-...
T Consensus 160 P~--~V~~LvLi~s~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (343)
T PRK08775 160 PA--RVRTLVVVSGAHRAHPYAAAWR-ALQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVR 236 (343)
T ss_pred hH--hhheEEEECccccCCHHHHHHH-HHHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCcc
Confidence 98 8999999997643321110000 0000000 0000000 0000 00000000000000000000
Q ss_pred CCHHHHHhhhh---hccCCCCCHHHHHHhCC-cccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCC-C
Q 008093 320 RSIRDFDSHAT---CLVGKFETVDTYYRNCS-SSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWH-G 394 (578)
Q Consensus 320 ~s~~efd~~~~---~~~~g~~~~~~yy~~~s-~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~-G 394 (578)
.....+..... .............+... ....+.+|++|+|+|+|++|.++|.+..........++..++++++ +
T Consensus 237 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~a 316 (343)
T PRK08775 237 VAAEDYLDAAGAQYVARTPVNAYLRLSESIDLHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPY 316 (343)
T ss_pred chHHHHHHHHHHHHHHhcChhHHHHHHHHHhhcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCc
Confidence 00010100000 00000000111111111 1224688999999999999999997654433333447889999985 9
Q ss_pred CccccccccccCcccHHHHHHHHHHhhcC
Q 008093 395 GHLAFFEGLTAAGMWWVRAVNEYLGVLHS 423 (578)
Q Consensus 395 GH~~~~eg~~~~~~w~~~~v~eFL~~~~~ 423 (578)
||+.++|. +..+++.+.+||++..+
T Consensus 317 GH~~~lE~----Pe~~~~~l~~FL~~~~~ 341 (343)
T PRK08775 317 GHDAFLKE----TDRIDAILTTALRSTGE 341 (343)
T ss_pred cHHHHhcC----HHHHHHHHHHHHHhccc
Confidence 99999993 34699999999987654
|
|
| >TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.78 E-value=9e-18 Score=171.10 Aligned_cols=254 Identities=16% Similarity=0.091 Sum_probs=145.8
Q ss_pred cCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCcc--HHHHHHHHHHHhCCceEEEEeCCCCCCCCC
Q 008093 128 SDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAA--SYIRHLVFNTAKRGWNVVVSNHRGLGGVSI 205 (578)
Q Consensus 128 ~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~--~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~ 205 (578)
.+|.++...++.|.+ ..++.||++||.++.... .....+++.|+++||+|+++|+||||.|+.
T Consensus 9 ~~~~~l~g~~~~p~~---------------~~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~ 73 (274)
T TIGR03100 9 CEGETLVGVLHIPGA---------------SHTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEG 73 (274)
T ss_pred cCCcEEEEEEEcCCC---------------CCCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCC
Confidence 456666655555432 234557777775432221 122567899999999999999999999875
Q ss_pred CCCCCCCCCchHHHHHHHHHHHHHCC-CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHH
Q 008093 206 TSDCFYNAGWTEDAREVIGYLHHEYP-KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLI 284 (578)
Q Consensus 206 ~~~~~~~~~~~~Dl~~~i~~l~~~~~-~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~ 284 (578)
... ....+.+|+.++++++++..+ ..+++++||||||.+++.++... . +|+++|++++++........ . ..
T Consensus 74 ~~~--~~~~~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~~-~--~v~~lil~~p~~~~~~~~~~--~-~~ 145 (274)
T TIGR03100 74 ENL--GFEGIDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPAD-L--RVAGLVLLNPWVRTEAAQAA--S-RI 145 (274)
T ss_pred CCC--CHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhhC-C--CccEEEEECCccCCcccchH--H-HH
Confidence 321 123466899999999988764 45799999999999999987653 3 69999999987543221100 0 11
Q ss_pred HHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhh-h-ccCCCCCHHHHHHhCCcccccCCCccceEEE
Q 008093 285 QKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHAT-C-LVGKFETVDTYYRNCSSSTYVGNVSIPLLCI 362 (578)
Q Consensus 285 ~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~-~-~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI 362 (578)
...|...+... .+... .+....+...+. ..+..... . ...........- ......+.++++|+|++
T Consensus 146 ~~~~~~~~~~~--~~~~~---~~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~P~ll~ 213 (274)
T TIGR03100 146 RHYYLGQLLSA--DFWRK---LLSGEVNLGSSL-----RGLGDALLKARQKGDEVAHGGLA--ERMKAGLERFQGPVLFI 213 (274)
T ss_pred HHHHHHHHhCh--HHHHH---hcCCCccHHHHH-----HHHHHHHHhhhhcCCCcccchHH--HHHHHHHHhcCCcEEEE
Confidence 11222111111 11110 011111111110 01111000 0 000000000010 01123566779999999
Q ss_pred EeCCCCCCCCCC------cchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHH
Q 008093 363 SSLDDPVCTVEA------IPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 363 ~g~dDpivp~~~------~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
+|..|+..+.-. ..+.....++++++..++++||+...| ..+..+.+.|.+||+
T Consensus 214 ~g~~D~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~~e---~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 214 LSGNDLTAQEFADSVLGEPAWRGALEDPGIERVEIDGADHTFSDR---VWREWVAARTTEWLR 273 (274)
T ss_pred EcCcchhHHHHHHHhccChhhHHHhhcCCeEEEecCCCCcccccH---HHHHHHHHHHHHHHh
Confidence 999999864211 111111244899999999999977666 344578999999985
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily. |
| >PLN03084 alpha/beta hydrolase fold protein; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.8e-17 Score=175.91 Aligned_cols=242 Identities=13% Similarity=0.108 Sum_probs=134.7
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCC---CCC-CCchHHHHHHHHHHHHHCCCCc
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDC---FYN-AGWTEDAREVIGYLHHEYPKAP 234 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~---~~~-~~~~~Dl~~~i~~l~~~~~~~~ 234 (578)
.+|+|||+||+++ +...| +.++..|.+ +|+|+++|+||||.|+..... .++ ..+.+|+.++++.+. ..+
T Consensus 126 ~~~~ivllHG~~~-~~~~w-~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l~----~~~ 198 (383)
T PLN03084 126 NNPPVLLIHGFPS-QAYSY-RKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDELK----SDK 198 (383)
T ss_pred CCCeEEEECCCCC-CHHHH-HHHHHHHhc-CCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHhC----CCC
Confidence 4578999999954 44456 778888865 899999999999999765331 122 234566666666553 458
Q ss_pred EEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhh--hHHHhhHHHHHHHHHHHHH-hHHHHHhhhcccccccC
Q 008093 235 LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIG--DRFIGRRLIQKIYDRALTI-GLQDYAQLHEPRYSRLA 311 (578)
Q Consensus 235 i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~--~~~l~~~~~~~~~~~~l~~-~l~~~~~~~~~~l~~~~ 311 (578)
++++|||+||.+++.++.++|+ +|+++|+++++...... ...+. .+...+....+.. .+...............
T Consensus 199 ~~LvG~s~GG~ia~~~a~~~P~--~v~~lILi~~~~~~~~~~~p~~l~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (383)
T PLN03084 199 VSLVVQGYFSPPVVKYASAHPD--KIKKLILLNPPLTKEHAKLPSTLS-EFSNFLLGEIFSQDPLRASDKALTSCGPYAM 275 (383)
T ss_pred ceEEEECHHHHHHHHHHHhChH--hhcEEEEECCCCccccccchHHHH-HHHHHHhhhhhhcchHHHHhhhhcccCccCC
Confidence 9999999999999999999998 89999999987532110 00000 0000000000000 00000000000000000
Q ss_pred CHHHHhc--c-----CCH-HHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcC
Q 008093 312 NWEGIKK--S-----RSI-RDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRAN 383 (578)
Q Consensus 312 d~~~i~~--~-----~s~-~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~ 383 (578)
..+.... . ... ..+.. +..... .....+...........+|++|+|+|+|++|++++.+.... .++.
T Consensus 276 ~~e~~~~~~~~~~~~~~~~~~l~~-~~r~~~--~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~~~-~a~~- 350 (383)
T PLN03084 276 KEDDAMVYRRPYLTSGSSGFALNA-ISRSMK--KELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNYDGVED-FCKS- 350 (383)
T ss_pred CHHHHHHHhccccCCcchHHHHHH-HHHHhh--cccchhhHHHHhhhccccCCCCEEEEeeCCCCCcCHHHHHH-HHHh-
Confidence 0000000 0 000 00000 000000 00000110000000114689999999999999998875443 2333
Q ss_pred CCEEEEEeCCCCccccccccccCcccHHHHHHHHHH
Q 008093 384 KNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 384 ~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
.+.++.+++++||+.+.|. | ..+.+.|.+|+.
T Consensus 351 ~~a~l~vIp~aGH~~~~E~--P--e~v~~~I~~Fl~ 382 (383)
T PLN03084 351 SQHKLIELPMAGHHVQEDC--G--EELGGIISGILS 382 (383)
T ss_pred cCCeEEEECCCCCCcchhC--H--HHHHHHHHHHhh
Confidence 4788999999999999983 3 358889999875
|
|
| >TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.78 E-value=3e-18 Score=180.81 Aligned_cols=112 Identities=18% Similarity=0.165 Sum_probs=76.2
Q ss_pred CCcEEEEECCCCCCCccH---------HHHHHH---HHHHhCCceEEEEeCCC--CCCCCCCC----CCCCC----CCch
Q 008093 159 TTPIAIVIPGLTSDSAAS---------YIRHLV---FNTAKRGWNVVVSNHRG--LGGVSITS----DCFYN----AGWT 216 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~---------yi~~l~---~~l~~~Gy~Vvv~D~RG--~G~S~~~~----~~~~~----~~~~ 216 (578)
..|+||++||+++++... |+..++ ..+...+|+|+++|+|| ||.|...+ ...+. ....
T Consensus 30 ~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~ 109 (351)
T TIGR01392 30 RSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITI 109 (351)
T ss_pred CCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcH
Confidence 357899999998765431 335554 25556899999999999 45443211 11111 0112
Q ss_pred HHHHHHHHHHHHHCCCCc-EEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcch
Q 008093 217 EDAREVIGYLHHEYPKAP-LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~~~~-i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~ 272 (578)
+|+.+.+..+.+..+..+ ++++||||||.+++.++..+|+ +|+++|+++++...
T Consensus 110 ~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~ 164 (351)
T TIGR01392 110 RDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPE--RVRAIVVLATSARH 164 (351)
T ss_pred HHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChH--hhheEEEEccCCcC
Confidence 444444444444555567 9999999999999999999998 89999999986543
|
This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes. |
| >PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.9e-17 Score=175.25 Aligned_cols=238 Identities=16% Similarity=0.104 Sum_probs=132.8
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEE
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAI 238 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lv 238 (578)
..|+||++||++++.. .| ..++..|.+ +|+|+++|+||||.|...... ...+++.+.+..+.+..+..+++++
T Consensus 130 ~~~~vl~~HG~~~~~~-~~-~~~~~~l~~-~~~v~~~d~~g~G~s~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~lv 202 (371)
T PRK14875 130 DGTPVVLIHGFGGDLN-NW-LFNHAALAA-GRPVIALDLPGHGASSKAVGA----GSLDELAAAVLAFLDALGIERAHLV 202 (371)
T ss_pred CCCeEEEECCCCCccc-hH-HHHHHHHhc-CCEEEEEcCCCCCCCCCCCCC----CCHHHHHHHHHHHHHhcCCccEEEE
Confidence 4578999999965444 45 566777765 599999999999998543221 1234555555555555666789999
Q ss_pred EEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhc
Q 008093 239 GTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKK 318 (578)
Q Consensus 239 GhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~ 318 (578)
||||||.+++.++..+++ ++.++|+++++.............+........+...+....... ..+.. ........
T Consensus 203 G~S~Gg~~a~~~a~~~~~--~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~ 278 (371)
T PRK14875 203 GHSMGGAVALRLAARAPQ--RVASLTLIAPAGLGPEINGDYIDGFVAAESRRELKPVLELLFADP-ALVTR-QMVEDLLK 278 (371)
T ss_pred eechHHHHHHHHHHhCch--heeEEEEECcCCcCcccchhHHHHhhcccchhHHHHHHHHHhcCh-hhCCH-HHHHHHHH
Confidence 999999999999999887 799999998763221111000000000000000000000000000 00000 00000000
Q ss_pred ---cCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCC
Q 008093 319 ---SRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGG 395 (578)
Q Consensus 319 ---~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GG 395 (578)
..........+... .+... ....+....+.++++|+|+++|++|+++|.+.. ....+++.+.+++++|
T Consensus 279 ~~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~----~~l~~~~~~~~~~~~g 349 (371)
T PRK14875 279 YKRLDGVDDALRALADA--LFAGG---RQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHA----QGLPDGVAVHVLPGAG 349 (371)
T ss_pred HhccccHHHHHHHHHHH--hccCc---ccchhHHHHHhcCCCCEEEEEECCCCccCHHHH----hhccCCCeEEEeCCCC
Confidence 00000000000000 00000 000112235678899999999999999986532 2234578899999999
Q ss_pred ccccccccccCcccHHHHHHHHHHh
Q 008093 396 HLAFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 396 H~~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
|+.+++. +.++.+.|.+||+.
T Consensus 350 H~~~~e~----p~~~~~~i~~fl~~ 370 (371)
T PRK14875 350 HMPQMEA----AADVNRLLAEFLGK 370 (371)
T ss_pred CChhhhC----HHHHHHHHHHHhcc
Confidence 9999883 34688888888864
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.8e-17 Score=184.17 Aligned_cols=271 Identities=17% Similarity=0.187 Sum_probs=145.0
Q ss_pred EEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCC
Q 008093 123 QLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGG 202 (578)
Q Consensus 123 ~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~ 202 (578)
+.+...||..+++.++.+ +++|+|||+||+++ +...| +.+...| ..||+|+++|+||||.
T Consensus 5 ~~~~~~~g~~l~~~~~g~-----------------~~~~~ivllHG~~~-~~~~w-~~~~~~L-~~~~~Vi~~D~~G~G~ 64 (582)
T PRK05855 5 RTVVSSDGVRLAVYEWGD-----------------PDRPTVVLVHGYPD-NHEVW-DGVAPLL-ADRFRVVAYDVRGAGR 64 (582)
T ss_pred EEEEeeCCEEEEEEEcCC-----------------CCCCeEEEEcCCCc-hHHHH-HHHHHHh-hcceEEEEecCCCCCC
Confidence 455567898988776432 24678999999964 44445 6788887 5689999999999999
Q ss_pred CCCCCC-CCCC-CCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHh
Q 008093 203 VSITSD-CFYN-AGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIG 280 (578)
Q Consensus 203 S~~~~~-~~~~-~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~ 280 (578)
|..... ..++ ..+.+|+.++++.+. ...+++++||||||.+++.++........+..++.++.+.... ...+..
T Consensus 65 S~~~~~~~~~~~~~~a~dl~~~i~~l~---~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~-~~~~~~ 140 (582)
T PRK05855 65 SSAPKRTAAYTLARLADDFAAVIDAVS---PDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDH-VGFWLR 140 (582)
T ss_pred CCCCCcccccCHHHHHHHHHHHHHHhC---CCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHH-HHHHHh
Confidence 975432 2222 345577777777653 2346999999999999998887632222455666665543111 000000
Q ss_pred hHH---HHHHHHHHHHHhHHHH-H-hhhccccccc-----C--CHHH-HhccC--CHHHHHhhhhhccCCCCCHHHHH--
Q 008093 281 RRL---IQKIYDRALTIGLQDY-A-QLHEPRYSRL-----A--NWEG-IKKSR--SIRDFDSHATCLVGKFETVDTYY-- 343 (578)
Q Consensus 281 ~~~---~~~~~~~~l~~~l~~~-~-~~~~~~l~~~-----~--d~~~-i~~~~--s~~efd~~~~~~~~g~~~~~~yy-- 343 (578)
... ........+....... . ....+.+... . .+.. ..... .......... ..........+.
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 219 (582)
T PRK05855 141 SGLRRPTPRRLARALGQLLRSWYIYLFHLPVLPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTT-LSDGAHGVKLYRAN 219 (582)
T ss_pred hcccccchhhhhHHHHHHhhhHHHHHHhCCCCcHHHhccchhhHHHHhhhhccCCCcchhhhhhh-hccccchHHHHHhh
Confidence 000 0000000000000000 0 0000000000 0 0000 00000 0000000000 000011111111
Q ss_pred -HhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhc
Q 008093 344 -RNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 344 -~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~ 422 (578)
........+..+++|+|+|+|++|+++|.+.... .....++..+.+++ +||+.++|. | ..+.+.|.+|++...
T Consensus 220 ~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~-~~~~~~~~~~~~~~-~gH~~~~e~--p--~~~~~~i~~fl~~~~ 293 (582)
T PRK05855 220 MIRSLSRPRERYTDVPVQLIVPTGDPYVRPALYDD-LSRWVPRLWRREIK-AGHWLPMSH--P--QVLAAAVAEFVDAVE 293 (582)
T ss_pred hhhhhccCccCCccCceEEEEeCCCcccCHHHhcc-ccccCCcceEEEcc-CCCcchhhC--h--hHHHHHHHHHHHhcc
Confidence 1111122356689999999999999999875543 23445667777765 799999983 3 368999999999865
Q ss_pred CC
Q 008093 423 SS 424 (578)
Q Consensus 423 ~~ 424 (578)
..
T Consensus 294 ~~ 295 (582)
T PRK05855 294 GG 295 (582)
T ss_pred CC
Confidence 43
|
|
| >PRK00175 metX homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.5e-17 Score=175.53 Aligned_cols=107 Identities=18% Similarity=0.219 Sum_probs=73.7
Q ss_pred CCcEEEEECCCCCCCccH-----------HHHHHHH---HHHhCCceEEEEeCCC-CCCCCCCCC------C-------C
Q 008093 159 TTPIAIVIPGLTSDSAAS-----------YIRHLVF---NTAKRGWNVVVSNHRG-LGGVSITSD------C-------F 210 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~-----------yi~~l~~---~l~~~Gy~Vvv~D~RG-~G~S~~~~~------~-------~ 210 (578)
.+|.||++||+++++... |+..++. .+...+|+|+++|+|| +|+|..... . .
T Consensus 47 ~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~ 126 (379)
T PRK00175 47 RSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPV 126 (379)
T ss_pred CCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCc
Confidence 368899999998766531 2255542 4445689999999999 355533211 0 1
Q ss_pred CC-CCchHHHHHHHHHHHHHCCCCc-EEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcc
Q 008093 211 YN-AGWTEDAREVIGYLHHEYPKAP-LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (578)
Q Consensus 211 ~~-~~~~~Dl~~~i~~l~~~~~~~~-i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d 271 (578)
|+ ..+.+|+.++++++ +..+ .+++||||||.+++.++.++|+ +|+++|++++...
T Consensus 127 ~~~~~~~~~~~~~l~~l----~~~~~~~lvG~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~ 183 (379)
T PRK00175 127 ITIRDWVRAQARLLDAL----GITRLAAVVGGSMGGMQALEWAIDYPD--RVRSALVIASSAR 183 (379)
T ss_pred CCHHHHHHHHHHHHHHh----CCCCceEEEEECHHHHHHHHHHHhChH--hhhEEEEECCCcc
Confidence 11 22334555555443 4456 5899999999999999999998 8999999997653
|
|
| >PLN02211 methyl indole-3-acetate methyltransferase | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.1e-17 Score=167.05 Aligned_cols=106 Identities=14% Similarity=0.224 Sum_probs=79.1
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEE
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFA 237 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~l 237 (578)
..+|+|||+||+.++. ..| ..++..|.+.||+|+++|+||||.|....... .++.+++..+.+.+.......++++
T Consensus 16 ~~~p~vvliHG~~~~~-~~w-~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~--~~~~~~~~~l~~~i~~l~~~~~v~l 91 (273)
T PLN02211 16 RQPPHFVLIHGISGGS-WCW-YKIRCLMENSGYKVTCIDLKSAGIDQSDADSV--TTFDEYNKPLIDFLSSLPENEKVIL 91 (273)
T ss_pred CCCCeEEEECCCCCCc-CcH-HHHHHHHHhCCCEEEEecccCCCCCCCCcccC--CCHHHHHHHHHHHHHhcCCCCCEEE
Confidence 4578899999996544 445 78888888889999999999999875332221 2233444445555544323468999
Q ss_pred EEEchHHHHHHHHHhhcCCCCCccEEEEEcCC
Q 008093 238 IGTSIGANILVKYLGEEGEKTPVAGAAAICSP 269 (578)
Q Consensus 238 vGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p 269 (578)
|||||||.+++.++..+++ +|+++|++++.
T Consensus 92 vGhS~GG~v~~~~a~~~p~--~v~~lv~~~~~ 121 (273)
T PLN02211 92 VGHSAGGLSVTQAIHRFPK--KICLAVYVAAT 121 (273)
T ss_pred EEECchHHHHHHHHHhChh--heeEEEEeccc
Confidence 9999999999999988887 89999999763
|
|
| >TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit | Back alignment and domain information |
|---|
Probab=99.72 E-value=6e-17 Score=170.85 Aligned_cols=108 Identities=12% Similarity=0.125 Sum_probs=85.2
Q ss_pred cEEEEECCCCCCCccHH----HHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCch-HHHHHHHHHHHHHCCCCcE
Q 008093 161 PIAIVIPGLTSDSAASY----IRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWT-EDAREVIGYLHHEYPKAPL 235 (578)
Q Consensus 161 PiVVllHGl~G~s~~~y----i~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~-~Dl~~~i~~l~~~~~~~~i 235 (578)
++||++||+.. +...+ .+.+++.|.++||+|+++|+||+|.+.... ....+. +|+.++++++.+..+..++
T Consensus 63 ~pvl~v~~~~~-~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~~---~~~d~~~~~~~~~v~~l~~~~~~~~i 138 (350)
T TIGR01836 63 TPLLIVYALVN-RPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRYL---TLDDYINGYIDKCVDYICRTSKLDQI 138 (350)
T ss_pred CcEEEeccccc-cceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhcC---CHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 34889999843 22111 157899999999999999999999764221 112233 4688999999998888899
Q ss_pred EEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhh
Q 008093 236 FAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLI 274 (578)
Q Consensus 236 ~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~ 274 (578)
+++||||||.+++.|++.+++ +|+++|++++|+++..
T Consensus 139 ~lvGhS~GG~i~~~~~~~~~~--~v~~lv~~~~p~~~~~ 175 (350)
T TIGR01836 139 SLLGICQGGTFSLCYAALYPD--KIKNLVTMVTPVDFET 175 (350)
T ss_pred cEEEECHHHHHHHHHHHhCch--heeeEEEeccccccCC
Confidence 999999999999999999887 7999999999988643
|
This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates. |
| >PRK10566 esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.4e-16 Score=156.49 Aligned_cols=209 Identities=14% Similarity=0.107 Sum_probs=125.3
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCC-CCC------CchHHHHHHHHHHHHHC
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCF-YNA------GWTEDAREVIGYLHHEY 230 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~-~~~------~~~~Dl~~~i~~l~~~~ 230 (578)
...|+||++||++++ ...| ..++..|+++||+|+++|+||||.+....... ... ...+|+.++++++.++.
T Consensus 25 ~~~p~vv~~HG~~~~-~~~~-~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 102 (249)
T PRK10566 25 TPLPTVFFYHGFTSS-KLVY-SYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEG 102 (249)
T ss_pred CCCCEEEEeCCCCcc-cchH-HHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 356899999999654 4445 67899999999999999999999753221111 110 12367778888887653
Q ss_pred --CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhccccc
Q 008093 231 --PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYS 308 (578)
Q Consensus 231 --~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~ 308 (578)
+..+++++||||||.+++.++..+++ +.+.+.+..+.... .+....+ .+...
T Consensus 103 ~~~~~~i~v~G~S~Gg~~al~~~~~~~~---~~~~~~~~~~~~~~------------~~~~~~~-----------~~~~~ 156 (249)
T PRK10566 103 WLLDDRLAVGGASMGGMTALGIMARHPW---VKCVASLMGSGYFT------------SLARTLF-----------PPLIP 156 (249)
T ss_pred CcCccceeEEeecccHHHHHHHHHhCCC---eeEEEEeeCcHHHH------------HHHHHhc-----------ccccc
Confidence 35689999999999999998887765 55554443221110 0000000 00000
Q ss_pred ccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCC-ccceEEEEeCCCCCCCCCCcchHHH--hcC--
Q 008093 309 RLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNV-SIPLLCISSLDDPVCTVEAIPWDEC--RAN-- 383 (578)
Q Consensus 309 ~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I-~vPvLiI~g~dDpivp~~~~~~~~~--~~~-- 383 (578)
. . ......+.... . .....+....+.++ ++|+|+++|++|+++|.+....... ...
T Consensus 157 ~-~-------~~~~~~~~~~~-~----------~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~ 217 (249)
T PRK10566 157 E-T-------AAQQAEFNNIV-A----------PLAEWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGL 217 (249)
T ss_pred c-c-------cccHHHHHHHH-H----------HHhhcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCC
Confidence 0 0 00011111110 0 01111223345666 7999999999999999874433211 111
Q ss_pred -CCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 384 -KNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 384 -~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
.++++..++++||... + -..+.+.+||++.
T Consensus 218 ~~~~~~~~~~~~~H~~~-----~---~~~~~~~~fl~~~ 248 (249)
T PRK10566 218 DKNLTCLWEPGVRHRIT-----P---EALDAGVAFFRQH 248 (249)
T ss_pred CcceEEEecCCCCCccC-----H---HHHHHHHHHHHhh
Confidence 2478889999999632 1 2568899999853
|
|
| >PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.1e-16 Score=156.30 Aligned_cols=209 Identities=22% Similarity=0.252 Sum_probs=123.5
Q ss_pred ceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCC
Q 008093 190 WNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSP 269 (578)
Q Consensus 190 y~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p 269 (578)
|+|+++|+||+|.|+............+|+.+.++.+.+..+..+++++||||||.+++.||.++|+ +|+++|+++++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~--~v~~lvl~~~~ 78 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPE--RVKKLVLISPP 78 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGG--GEEEEEEESES
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCch--hhcCcEEEeee
Confidence 7899999999999973101222333468999999999999888899999999999999999999999 99999999886
Q ss_pred c--chhhhhHHHhh-HHHHHHHHHH---HHHhHHHHHhhhcc---cccc--cCCHHHHhccCCHHHHHhhhhhccCCCCC
Q 008093 270 W--DLLIGDRFIGR-RLIQKIYDRA---LTIGLQDYAQLHEP---RYSR--LANWEGIKKSRSIRDFDSHATCLVGKFET 338 (578)
Q Consensus 270 ~--d~~~~~~~l~~-~~~~~~~~~~---l~~~l~~~~~~~~~---~l~~--~~d~~~i~~~~s~~efd~~~~~~~~g~~~ 338 (578)
. ........... .......... .............. .... ..+............+.... .....+..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 157 (230)
T PF00561_consen 79 PDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETD-AFDNMFWN 157 (230)
T ss_dssp SHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHH-HHHHHHHH
T ss_pred ccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHH-HHhhhccc
Confidence 2 11111111111 0000000000 00000100000000 0000 00000000000000000000 00000002
Q ss_pred HHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccc
Q 008093 339 VDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEG 402 (578)
Q Consensus 339 ~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg 402 (578)
...++........+.+|++|+|+++|++|+++|.+.... ..+..++.++++++++||+.++++
T Consensus 158 ~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~-~~~~~~~~~~~~~~~~GH~~~~~~ 220 (230)
T PF00561_consen 158 ALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQ-LAKLIPNSQLVLIEGSGHFAFLEG 220 (230)
T ss_dssp HHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHH-HHHHSTTEEEEEETTCCSTHHHHS
T ss_pred cccccccccccccccccCCCeEEEEeCCCCCCCHHHHHH-HHHhcCCCEEEECCCCChHHHhcC
Confidence 334444445556788899999999999999999886665 567889999999999999999985
|
; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A .... |
| >KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.70 E-value=4.7e-16 Score=151.51 Aligned_cols=195 Identities=18% Similarity=0.148 Sum_probs=138.3
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHh-CCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC-CCCcEE
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAK-RGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY-PKAPLF 236 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~-~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~-~~~~i~ 236 (578)
..++++++||...+-.... .+...+.. .+++++.+|++|+|.|+++.... +..+|+.++.+++++++ +.++++
T Consensus 59 ~~~~lly~hGNa~Dlgq~~--~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~---n~y~Di~avye~Lr~~~g~~~~Ii 133 (258)
T KOG1552|consen 59 AHPTLLYSHGNAADLGQMV--ELFKELSIFLNCNVVSYDYSGYGRSSGKPSER---NLYADIKAVYEWLRNRYGSPERII 133 (258)
T ss_pred cceEEEEcCCcccchHHHH--HHHHHHhhcccceEEEEecccccccCCCcccc---cchhhHHHHHHHHHhhcCCCceEE
Confidence 4589999999865555322 33333433 48999999999999998876543 55699999999999999 588999
Q ss_pred EEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHH
Q 008093 237 AIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGI 316 (578)
Q Consensus 237 lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i 316 (578)
++|+|||+..++.+|++.+ ++|+|+.+|-.+.... +. +..
T Consensus 134 l~G~SiGt~~tv~Lasr~~----~~alVL~SPf~S~~rv----------------~~-----------~~~--------- 173 (258)
T KOG1552|consen 134 LYGQSIGTVPTVDLASRYP----LAAVVLHSPFTSGMRV----------------AF-----------PDT--------- 173 (258)
T ss_pred EEEecCCchhhhhHhhcCC----cceEEEeccchhhhhh----------------hc-----------cCc---------
Confidence 9999999999999999985 6788888654432110 00 000
Q ss_pred hccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCc
Q 008093 317 KKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGH 396 (578)
Q Consensus 317 ~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH 396 (578)
.++ .-|| .| ...+.+..|++|+|++||.+|.+++............+..+-....++||
T Consensus 174 --~~~-~~~d--------~f----------~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH 232 (258)
T KOG1552|consen 174 --KTT-YCFD--------AF----------PNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGH 232 (258)
T ss_pred --ceE-Eeec--------cc----------cccCcceeccCCEEEEecccCceecccccHHHHHhccccCCCcEEecCCC
Confidence 000 0001 11 11577888999999999999999999866543333334457778899999
Q ss_pred cccccccccCcccHHHHHHHHHHhhcCC
Q 008093 397 LAFFEGLTAAGMWWVRAVNEYLGVLHSS 424 (578)
Q Consensus 397 ~~~~eg~~~~~~w~~~~v~eFL~~~~~~ 424 (578)
+...-. ..+.+.+.+|+..+...
T Consensus 233 ~~~~~~-----~~yi~~l~~f~~~~~~~ 255 (258)
T KOG1552|consen 233 NDIELY-----PEYIEHLRRFISSVLPS 255 (258)
T ss_pred cccccC-----HHHHHHHHHHHHHhccc
Confidence 864431 14888999999887654
|
|
| >PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.8e-15 Score=183.41 Aligned_cols=247 Identities=15% Similarity=0.150 Sum_probs=134.5
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCC-C---CCCCchHHHHHHHHHHHHHCCCCc
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDC-F---YNAGWTEDAREVIGYLHHEYPKAP 234 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~-~---~~~~~~~Dl~~~i~~l~~~~~~~~ 234 (578)
.+|+|||+||++++.. .| ..++..|.+ +|+|+++|+||||.|...... . ......+++.+.+..+.+.....+
T Consensus 1370 ~~~~vVllHG~~~s~~-~w-~~~~~~L~~-~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~~~ 1446 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGE-DW-IPIMKAISG-SARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITPGK 1446 (1655)
T ss_pred CCCeEEEECCCCCCHH-HH-HHHHHHHhC-CCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCCCC
Confidence 4578999999966554 45 677777764 699999999999998654210 0 001112344433333333344568
Q ss_pred EEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhh-HHHhhHHHHHHHHHHHHHhHHHHHhhhc-ccccccCC
Q 008093 235 LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGD-RFIGRRLIQKIYDRALTIGLQDYAQLHE-PRYSRLAN 312 (578)
Q Consensus 235 i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~-~~l~~~~~~~~~~~~l~~~l~~~~~~~~-~~l~~~~d 312 (578)
++++||||||.+++.++.++|+ +|+++|++++........ ..+................+..+..... +.+
T Consensus 1447 v~LvGhSmGG~iAl~~A~~~P~--~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~----- 1519 (1655)
T PLN02980 1447 VTLVGYSMGARIALYMALRFSD--KIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFLENWYSGEL----- 1519 (1655)
T ss_pred EEEEEECHHHHHHHHHHHhChH--hhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHhccHHH-----
Confidence 9999999999999999999998 899999998643221110 0000000000000000001111110000 000
Q ss_pred HHHHhccCCHHHHHhhhhhccC--CCCCHHHHHH------hCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCC
Q 008093 313 WEGIKKSRSIRDFDSHATCLVG--KFETVDTYYR------NCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANK 384 (578)
Q Consensus 313 ~~~i~~~~s~~efd~~~~~~~~--g~~~~~~yy~------~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~ 384 (578)
+... .....+...+..... ........+. .......+.+|++|+|+|+|++|++++. .... ..+..+
T Consensus 1520 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~~-~a~~-~~~~i~ 1594 (1655)
T PLN02980 1520 WKSL---RNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFKQ-IAQK-MYREIG 1594 (1655)
T ss_pred hhhh---ccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccHH-HHHH-HHHHcc
Confidence 0000 000000000000000 0000001111 1112246889999999999999998752 2221 222222
Q ss_pred ------------CEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcCC
Q 008093 385 ------------NVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSS 424 (578)
Q Consensus 385 ------------~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~~ 424 (578)
.+++++++++||+.++|. | ..+.+.|.+||+....+
T Consensus 1595 ~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~--P--e~f~~~I~~FL~~~~~~ 1642 (1655)
T PLN02980 1595 KSKESGNDKGKEIIEIVEIPNCGHAVHLEN--P--LPVIRALRKFLTRLHNS 1642 (1655)
T ss_pred ccccccccccccceEEEEECCCCCchHHHC--H--HHHHHHHHHHHHhcccc
Confidence 268999999999999993 3 36999999999986544
|
|
| >PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A | Back alignment and domain information |
|---|
Probab=99.67 E-value=9.7e-16 Score=139.53 Aligned_cols=144 Identities=19% Similarity=0.266 Sum_probs=110.4
Q ss_pred EEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH-CCCCcEEEEEE
Q 008093 162 IAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHE-YPKAPLFAIGT 240 (578)
Q Consensus 162 iVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~-~~~~~i~lvGh 240 (578)
+||++||++++ ...| ..+++.++++||.|+++|+||+|.+. ..+++.++++.+.+. .+..+++++||
T Consensus 1 ~vv~~HG~~~~-~~~~-~~~~~~l~~~G~~v~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~i~l~G~ 68 (145)
T PF12695_consen 1 VVVLLHGWGGS-RRDY-QPLAEALAEQGYAVVAFDYPGHGDSD----------GADAVERVLADIRAGYPDPDRIILIGH 68 (145)
T ss_dssp EEEEECTTTTT-THHH-HHHHHHHHHTTEEEEEESCTTSTTSH----------HSHHHHHHHHHHHHHHCTCCEEEEEEE
T ss_pred CEEEECCCCCC-HHHH-HHHHHHHHHCCCEEEEEecCCCCccc----------hhHHHHHHHHHHHhhcCCCCcEEEEEE
Confidence 48999999664 4455 78999999999999999999999862 224777888876443 35679999999
Q ss_pred chHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccC
Q 008093 241 SIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSR 320 (578)
Q Consensus 241 SmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~ 320 (578)
|+||.+++.++.++ . +++++|++++..+
T Consensus 69 S~Gg~~a~~~~~~~-~--~v~~~v~~~~~~~------------------------------------------------- 96 (145)
T PF12695_consen 69 SMGGAIAANLAARN-P--RVKAVVLLSPYPD------------------------------------------------- 96 (145)
T ss_dssp THHHHHHHHHHHHS-T--TESEEEEESESSG-------------------------------------------------
T ss_pred ccCcHHHHHHhhhc-c--ceeEEEEecCccc-------------------------------------------------
Confidence 99999999999987 4 6999999976210
Q ss_pred CHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCcc
Q 008093 321 SIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHL 397 (578)
Q Consensus 321 s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~ 397 (578)
...+.+.++|+++++|++|++++.+...........+.++.++++++|+
T Consensus 97 ----------------------------~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 97 ----------------------------SEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp ----------------------------CHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred ----------------------------hhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 0112234559999999999999887665544445578999999999995
|
... |
| >KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.2e-16 Score=157.83 Aligned_cols=243 Identities=17% Similarity=0.204 Sum_probs=148.7
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhC-CceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEE
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKR-GWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLF 236 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~-Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~ 236 (578)
...|+++++||+.|+. ..| +.+...|++. |-.++++|.|.||.|+......|. ..++|+..+++..+..+...++.
T Consensus 50 ~~~Pp~i~lHGl~GS~-~Nw-~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h~~~-~ma~dv~~Fi~~v~~~~~~~~~~ 126 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSK-ENW-RSVAKNLSRKLGRDVYAVDVRNHGSSPKITVHNYE-AMAEDVKLFIDGVGGSTRLDPVV 126 (315)
T ss_pred CCCCceEEecccccCC-CCH-HHHHHHhcccccCceEEEecccCCCCccccccCHH-HHHHHHHHHHHHcccccccCCce
Confidence 5678899999998754 667 8888888764 789999999999999877665544 46789999999887655567899
Q ss_pred EEEEchHH-HHHHHHHhhcCCCCCccEEEEEcC-CcchhhhhHHHhhHHHHHHHHHHHH----HhHHHHHhhhccccccc
Q 008093 237 AIGTSIGA-NILVKYLGEEGEKTPVAGAAAICS-PWDLLIGDRFIGRRLIQKIYDRALT----IGLQDYAQLHEPRYSRL 310 (578)
Q Consensus 237 lvGhSmGG-~ial~ya~~~p~~~~V~~~Vlis~-p~d~~~~~~~l~~~~~~~~~~~~l~----~~l~~~~~~~~~~l~~~ 310 (578)
++|||||| -+++.+....|+ .+..++++.. |.-..... ......+..+...-.. .+.+...+....
T Consensus 127 l~GHsmGG~~~~m~~t~~~p~--~~~rliv~D~sP~~~~~~~-~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~----- 198 (315)
T KOG2382|consen 127 LLGHSMGGVKVAMAETLKKPD--LIERLIVEDISPGGVGRSY-GEYRELIKAMIQLDLSIGVSRGRKEALKSLIE----- 198 (315)
T ss_pred ecccCcchHHHHHHHHHhcCc--ccceeEEEecCCccCCccc-chHHHHHHHHHhccccccccccHHHHHHHHHH-----
Confidence 99999999 666666677777 6777777663 42111100 0000000000000000 000000000000
Q ss_pred CCHHHHhccCCHHHHHhhhhh--ccCC-------CCCHHHHHHh---CCccccc--CCCccceEEEEeCCCCCCCCCCcc
Q 008093 311 ANWEGIKKSRSIRDFDSHATC--LVGK-------FETVDTYYRN---CSSSTYV--GNVSIPLLCISSLDDPVCTVEAIP 376 (578)
Q Consensus 311 ~d~~~i~~~~s~~efd~~~~~--~~~g-------~~~~~~yy~~---~s~~~~l--~~I~vPvLiI~g~dDpivp~~~~~ 376 (578)
+.....+++|...-.. +..+ ..++.+.+.. .+....+ ..-..|+|++.|.++++++.+..+
T Consensus 199 -----~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~ 273 (315)
T KOG2382|consen 199 -----VGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVPDEHYP 273 (315)
T ss_pred -----HhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcChhHHH
Confidence 0111111122111111 0000 0122222222 2222233 556899999999999999998776
Q ss_pred hHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 377 WDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 377 ~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
. .....|++++..++++||+.++|. |+ .+.+.|.+|++..
T Consensus 274 ~-~~~~fp~~e~~~ld~aGHwVh~E~--P~--~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 274 R-MEKIFPNVEVHELDEAGHWVHLEK--PE--EFIESISEFLEEP 313 (315)
T ss_pred H-HHHhccchheeecccCCceeecCC--HH--HHHHHHHHHhccc
Confidence 5 456678899999999999999993 44 5889999998753
|
|
| >KOG2984 consensus Predicted hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.4e-16 Score=146.57 Aligned_cols=228 Identities=14% Similarity=0.117 Sum_probs=148.1
Q ss_pred EEEEECCCCCCCccHHHHHHHHHHHhC-CceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEE
Q 008093 162 IAIVIPGLTSDSAASYIRHLVFNTAKR-GWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGT 240 (578)
Q Consensus 162 iVVllHGl~G~s~~~yi~~l~~~l~~~-Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGh 240 (578)
.|++++|.-|++...| ......+.+. -+.++++|.||+|.|..+..++-..-+.+|...+++-++.. .-.++.++|+
T Consensus 44 ~iLlipGalGs~~tDf-~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~avdLM~aL-k~~~fsvlGW 121 (277)
T KOG2984|consen 44 YILLIPGALGSYKTDF-PPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAVDLMEAL-KLEPFSVLGW 121 (277)
T ss_pred eeEecccccccccccC-CHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHHHHHHHh-CCCCeeEeee
Confidence 5889999989888877 4444444443 49999999999999977655443344567888888766543 3468999999
Q ss_pred chHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccC
Q 008093 241 SIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSR 320 (578)
Q Consensus 241 SmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~ 320 (578)
|=||..++..|+++++ .|..+|..+...-.........+.. +-.+++....-+. +...+..+.+. +
T Consensus 122 SdGgiTalivAak~~e--~v~rmiiwga~ayvn~~~~ma~kgi--Rdv~kWs~r~R~P--------~e~~Yg~e~f~--~ 187 (277)
T KOG2984|consen 122 SDGGITALIVAAKGKE--KVNRMIIWGAAAYVNHLGAMAFKGI--RDVNKWSARGRQP--------YEDHYGPETFR--T 187 (277)
T ss_pred cCCCeEEEEeeccChh--hhhhheeecccceecchhHHHHhch--HHHhhhhhhhcch--------HHHhcCHHHHH--H
Confidence 9999999999999998 7888887775432222111111110 0001111111111 11111111110 1
Q ss_pred CHHHHHhhhhhccCCCCCHHHHHHhC---CcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCcc
Q 008093 321 SIRDFDSHATCLVGKFETVDTYYRNC---SSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHL 397 (578)
Q Consensus 321 s~~efd~~~~~~~~g~~~~~~yy~~~---s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~ 397 (578)
...+|.+. +.+++..+ -|...+++|+||+|++||+.||+|+...+.+ .....+..++.+.+.|+|.
T Consensus 188 ~wa~wvD~----------v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~f-i~~~~~~a~~~~~peGkHn 256 (277)
T KOG2984|consen 188 QWAAWVDV----------VDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCF-IPVLKSLAKVEIHPEGKHN 256 (277)
T ss_pred HHHHHHHH----------HHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccc-hhhhcccceEEEccCCCcc
Confidence 11122221 11222222 2557899999999999999999999998876 4456678899999999999
Q ss_pred ccccccccCcccHHHHHHHHHHh
Q 008093 398 AFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 398 ~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
.++.- ..|+++.+.|||+.
T Consensus 257 ~hLry----a~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 257 FHLRY----AKEFNKLVLDFLKS 275 (277)
T ss_pred eeeec----hHHHHHHHHHHHhc
Confidence 88872 23899999999985
|
|
| >TIGR00976 /NonD putative hydrolase, CocE/NonD family | Back alignment and domain information |
|---|
Probab=99.63 E-value=7.6e-15 Score=163.92 Aligned_cols=133 Identities=16% Similarity=0.183 Sum_probs=104.3
Q ss_pred EEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCc--cHHHHHHHHHHHhCCceEEEEeCCCCCC
Q 008093 125 FRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSA--ASYIRHLVFNTAKRGWNVVVSNHRGLGG 202 (578)
Q Consensus 125 l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~--~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~ 202 (578)
|++.||..+..+++.|.+ ....|+||++||++.... ..+.......++++||.|+++|+||+|.
T Consensus 1 i~~~DG~~L~~~~~~P~~--------------~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~ 66 (550)
T TIGR00976 1 VPMRDGTRLAIDVYRPAG--------------GGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGA 66 (550)
T ss_pred CcCCCCCEEEEEEEecCC--------------CCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEecccccc
Confidence 467899999999987743 246799999999965432 1122234567889999999999999999
Q ss_pred CCCCCCCCCCCCchHHHHHHHHHHHHH-CCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhh
Q 008093 203 VSITSDCFYNAGWTEDAREVIGYLHHE-YPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLI 274 (578)
Q Consensus 203 S~~~~~~~~~~~~~~Dl~~~i~~l~~~-~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~ 274 (578)
|+....... ....+|+.++++++.++ ..+.+++++|+||||.+++.++..+++ .++++|..++..+...
T Consensus 67 S~g~~~~~~-~~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~--~l~aiv~~~~~~d~~~ 136 (550)
T TIGR00976 67 SEGEFDLLG-SDEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPP--ALRAIAPQEGVWDLYR 136 (550)
T ss_pred CCCceEecC-cccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCC--ceeEEeecCcccchhH
Confidence 986533222 45678999999999876 345689999999999999999998887 8999999988877654
|
This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases. |
| >PRK06765 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.4e-14 Score=154.23 Aligned_cols=256 Identities=14% Similarity=0.029 Sum_probs=135.6
Q ss_pred CCCcEEEEECCCCCCCcc-----------HHHHHHHH---HHHhCCceEEEEeCCCCCCCC-------CC------CCCC
Q 008093 158 DTTPIAIVIPGLTSDSAA-----------SYIRHLVF---NTAKRGWNVVVSNHRGLGGVS-------IT------SDCF 210 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~-----------~yi~~l~~---~l~~~Gy~Vvv~D~RG~G~S~-------~~------~~~~ 210 (578)
...++||++|+++|+++. .|+..++- .+--..|.|+++|..|-|.|. ++ +.+.
T Consensus 54 ~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~ 133 (389)
T PRK06765 54 AKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKP 133 (389)
T ss_pred CCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCc
Confidence 345889999999986532 23244432 233456999999999965421 10 0111
Q ss_pred C----CCCchHHHHHHHHHHHHHCCCCcEE-EEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhh-HHHhhHHH
Q 008093 211 Y----NAGWTEDAREVIGYLHHEYPKAPLF-AIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGD-RFIGRRLI 284 (578)
Q Consensus 211 ~----~~~~~~Dl~~~i~~l~~~~~~~~i~-lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~-~~l~~~~~ 284 (578)
+ ..-..+|+.+.+..+.+..+..++. ++||||||++++.++.++|+ +|.++|++++........ ..+.....
T Consensus 134 ~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~--~v~~lv~ia~~~~~~~~~~~~~~~~~~ 211 (389)
T PRK06765 134 YGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPH--MVERMIGVIGNPQNDAWTSVNVLQNWA 211 (389)
T ss_pred cCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChH--hhheEEEEecCCCCChhHHHHHHHHHH
Confidence 1 1112356666555555666677776 99999999999999999999 899999998755432211 11111000
Q ss_pred HHHHHH-------H-----HHHhHHHH------H----hhhccccccc----CCH-HHHhccCCHHHHHhhhhhccCCCC
Q 008093 285 QKIYDR-------A-----LTIGLQDY------A----QLHEPRYSRL----ANW-EGIKKSRSIRDFDSHATCLVGKFE 337 (578)
Q Consensus 285 ~~~~~~-------~-----l~~~l~~~------~----~~~~~~l~~~----~d~-~~i~~~~s~~efd~~~~~~~~g~~ 337 (578)
..+... + -..++... . ......+.+. .+. ........+..+.+....+.....
T Consensus 212 ~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~e~yl~~~~~~~~~~~ 291 (389)
T PRK06765 212 EAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTSFEKEINKATYRRAELV 291 (389)
T ss_pred HHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhhHHHHHHHHHHHhhhcc
Confidence 000000 0 00000000 0 0000000000 000 000000011111111110101111
Q ss_pred CHHHHH------HhC-------CcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcC----CCEEEEEeCC-CCcccc
Q 008093 338 TVDTYY------RNC-------SSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRAN----KNVVLATTWH-GGHLAF 399 (578)
Q Consensus 338 ~~~~yy------~~~-------s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~----~~~~l~~~~~-GGH~~~ 399 (578)
+..+|. ... +....+.+|++|+|+|+|++|.++|.+..... .+.. +++++.+++. .||+.+
T Consensus 292 Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~l-a~~lp~~~~~a~l~~I~s~~GH~~~ 370 (389)
T PRK06765 292 DANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKM-VDILQKQGKYAEVYEIESINGHMAG 370 (389)
T ss_pred ChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHH-HHHhhhcCCCeEEEEECCCCCcchh
Confidence 111111 111 12346778999999999999999998754432 2222 4789999985 899999
Q ss_pred ccccccCcccHHHHHHHHHHh
Q 008093 400 FEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 400 ~eg~~~~~~w~~~~v~eFL~~ 420 (578)
+|. +..+.+.|.+||++
T Consensus 371 le~----p~~~~~~I~~FL~~ 387 (389)
T PRK06765 371 VFD----IHLFEKKIYEFLNR 387 (389)
T ss_pred hcC----HHHHHHHHHHHHcc
Confidence 983 33588999999864
|
|
| >PRK11071 esterase YqiA; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=5.8e-15 Score=142.18 Aligned_cols=184 Identities=14% Similarity=0.061 Sum_probs=111.4
Q ss_pred cEEEEECCCCCCCccHHHHHHHHHHHh--CCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEE
Q 008093 161 PIAIVIPGLTSDSAASYIRHLVFNTAK--RGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAI 238 (578)
Q Consensus 161 PiVVllHGl~G~s~~~yi~~l~~~l~~--~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lv 238 (578)
|+||++||++++..++....+...+.+ .+|+|+++|+||+| +|+.+.+..+.++.+..+++++
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~---------------~~~~~~l~~l~~~~~~~~~~lv 66 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP---------------ADAAELLESLVLEHGGDPLGLV 66 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH---------------HHHHHHHHHHHHHcCCCCeEEE
Confidence 569999999776666553345556654 37999999999985 2344555555555666789999
Q ss_pred EEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhc
Q 008093 239 GTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKK 318 (578)
Q Consensus 239 GhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~ 318 (578)
||||||.+++.++.+++. .+|+++++.+.... + ...+ ....... ..+
T Consensus 67 G~S~Gg~~a~~~a~~~~~-----~~vl~~~~~~~~~~---~---------~~~~--------~~~~~~~----~~~---- 113 (190)
T PRK11071 67 GSSLGGYYATWLSQCFML-----PAVVVNPAVRPFEL---L---------TDYL--------GENENPY----TGQ---- 113 (190)
T ss_pred EECHHHHHHHHHHHHcCC-----CEEEECCCCCHHHH---H---------HHhc--------CCccccc----CCC----
Confidence 999999999999999874 35788887652110 0 0000 0000000 000
Q ss_pred cCCHHHHHhhhhhccCCCCCHHHHHHhCC--cccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCc
Q 008093 319 SRSIRDFDSHATCLVGKFETVDTYYRNCS--SSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGH 396 (578)
Q Consensus 319 ~~s~~efd~~~~~~~~g~~~~~~yy~~~s--~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH 396 (578)
.+.-..+++.+.. ....+. ..+|+++|+|.+|.++|.+....... +..+.++++|+|
T Consensus 114 ----------------~~~~~~~~~~d~~~~~~~~i~-~~~~v~iihg~~De~V~~~~a~~~~~----~~~~~~~~ggdH 172 (190)
T PRK11071 114 ----------------QYVLESRHIYDLKVMQIDPLE-SPDLIWLLQQTGDEVLDYRQAVAYYA----ACRQTVEEGGNH 172 (190)
T ss_pred ----------------cEEEcHHHHHHHHhcCCccCC-ChhhEEEEEeCCCCcCCHHHHHHHHH----hcceEEECCCCc
Confidence 0000011111110 112233 67888999999999999885543222 345667799999
Q ss_pred cccccccccCcccHHHHHHHHHH
Q 008093 397 LAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 397 ~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
.- .+ ...+.+.+.+|+.
T Consensus 173 ~f--~~----~~~~~~~i~~fl~ 189 (190)
T PRK11071 173 AF--VG----FERYFNQIVDFLG 189 (190)
T ss_pred ch--hh----HHHhHHHHHHHhc
Confidence 53 21 1236677888864
|
|
| >TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.4e-14 Score=146.16 Aligned_cols=111 Identities=14% Similarity=0.130 Sum_probs=87.6
Q ss_pred CCcEEEEECCCCCCCc--cHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEE
Q 008093 159 TTPIAIVIPGLTSDSA--ASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLF 236 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~--~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~ 236 (578)
.+|+||++||+++... ...+..+++.|+++||+|+++|+||||.|+..........+.+|+.++++++++. +..+++
T Consensus 24 ~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~~~~~~~Dv~~ai~~L~~~-~~~~v~ 102 (266)
T TIGR03101 24 PRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAARWDVWKEDVAAAYRWLIEQ-GHPPVT 102 (266)
T ss_pred CceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccCCHHHHHHHHHHHHHHHHhc-CCCCEE
Confidence 4688999999954322 1223667889999999999999999999875432221234678999999999875 467899
Q ss_pred EEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcch
Q 008093 237 AIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (578)
Q Consensus 237 lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~ 272 (578)
++||||||.+++.++.++++ .++++|++++....
T Consensus 103 LvG~SmGG~vAl~~A~~~p~--~v~~lVL~~P~~~g 136 (266)
T TIGR03101 103 LWGLRLGALLALDAANPLAA--KCNRLVLWQPVVSG 136 (266)
T ss_pred EEEECHHHHHHHHHHHhCcc--ccceEEEeccccch
Confidence 99999999999999999887 79999999876543
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily. |
| >COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.60 E-value=3.4e-14 Score=160.56 Aligned_cols=246 Identities=17% Similarity=0.079 Sum_probs=159.4
Q ss_pred CCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeC
Q 008093 118 FSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 197 (578)
Q Consensus 118 ~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~ 197 (578)
.+.+...+...||.++....+.|.+.. ...+-|+||++||-...............++.+||.|+.+|+
T Consensus 363 ~~~e~~~~~~~dG~~i~~~l~~P~~~~-----------~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~ 431 (620)
T COG1506 363 AEPEPVTYKSNDGETIHGWLYKPPGFD-----------PRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNY 431 (620)
T ss_pred CCceEEEEEcCCCCEEEEEEecCCCCC-----------CCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCC
Confidence 455777888899999986555553310 012249999999975333332236677888999999999999
Q ss_pred CCCCCCCCC----CCCCCCCCchHHHHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcc
Q 008093 198 RGLGGVSIT----SDCFYNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (578)
Q Consensus 198 RG~G~S~~~----~~~~~~~~~~~Dl~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d 271 (578)
||.++-... ...-+.....+|+.+.++++.+.- ...++.++|+|+||.+++..+...+. ++++++..++.+
T Consensus 432 RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~~---f~a~~~~~~~~~ 508 (620)
T COG1506 432 RGSTGYGREFADAIRGDWGGVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTPR---FKAAVAVAGGVD 508 (620)
T ss_pred CCCCccHHHHHHhhhhccCCccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCch---hheEEeccCcch
Confidence 986553111 112233455689999999664432 23589999999999999999988774 778877766543
Q ss_pred hhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccc
Q 008093 272 LLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTY 351 (578)
Q Consensus 272 ~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~ 351 (578)
-....... . ..+ ...+ +.. ..+...-.++|...|+...
T Consensus 509 ~~~~~~~~-------------~-----------~~~--~~~~------------~~~----~~~~~~~~~~~~~~sp~~~ 546 (620)
T COG1506 509 WLLYFGES-------------T-----------EGL--RFDP------------EEN----GGGPPEDREKYEDRSPIFY 546 (620)
T ss_pred hhhhcccc-------------c-----------hhh--cCCH------------HHh----CCCcccChHHHHhcChhhh
Confidence 21100000 0 000 0000 000 0010003467778899999
Q ss_pred cCCCccceEEEEeCCCCCCCCCCcch---HHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhc
Q 008093 352 VGNVSIPLLCISSLDDPVCTVEAIPW---DECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 352 l~~I~vPvLiI~g~dDpivp~~~~~~---~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~ 422 (578)
+.+|++|+|+|||.+|..||.+.... .+.....+++++++++.||-.--. .+...+.+.+.+|+++..
T Consensus 547 ~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~---~~~~~~~~~~~~~~~~~~ 617 (620)
T COG1506 547 ADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRP---ENRVKVLKEILDWFKRHL 617 (620)
T ss_pred hcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCc---hhHHHHHHHHHHHHHHHh
Confidence 99999999999999999999874332 344567889999999999954332 122345677888887654
|
|
| >PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification | Back alignment and domain information |
|---|
Probab=99.60 E-value=4.8e-15 Score=145.01 Aligned_cols=196 Identities=21% Similarity=0.214 Sum_probs=127.2
Q ss_pred HHHHHHHhCCceEEEEeCCCCCCCCCCC----CCCCCCCchHHHHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhh
Q 008093 180 HLVFNTAKRGWNVVVSNHRGLGGVSITS----DCFYNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGE 253 (578)
Q Consensus 180 ~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~----~~~~~~~~~~Dl~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~ 253 (578)
.....|+++||.|+.+|+||.++....- .........+|+.++++++.+++ +..++.++|+|+||.+++..+..
T Consensus 5 ~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~ 84 (213)
T PF00326_consen 5 WNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQ 84 (213)
T ss_dssp HHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhcc
Confidence 4566788999999999999987542110 11111234589999999998876 35689999999999999999998
Q ss_pred cCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhcc
Q 008093 254 EGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLV 333 (578)
Q Consensus 254 ~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~ 333 (578)
+++ .++++|+.++..|.......... +... ++...
T Consensus 85 ~~~--~f~a~v~~~g~~d~~~~~~~~~~------~~~~--------------------------------~~~~~----- 119 (213)
T PF00326_consen 85 HPD--RFKAAVAGAGVSDLFSYYGTTDI------YTKA--------------------------------EYLEY----- 119 (213)
T ss_dssp TCC--GSSEEEEESE-SSTTCSBHHTCC------HHHG--------------------------------HHHHH-----
T ss_pred cce--eeeeeeccceecchhcccccccc------cccc--------------------------------ccccc-----
Confidence 888 89999999988876543211000 0000 00000
Q ss_pred CCCCCHHHHHHhCCcccccCC--CccceEEEEeCCCCCCCCCCcc---hHHHhcCCCEEEEEeCCCCccccccccccCcc
Q 008093 334 GKFETVDTYYRNCSSSTYVGN--VSIPLLCISSLDDPVCTVEAIP---WDECRANKNVVLATTWHGGHLAFFEGLTAAGM 408 (578)
Q Consensus 334 ~g~~~~~~yy~~~s~~~~l~~--I~vPvLiI~g~dDpivp~~~~~---~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~ 408 (578)
.......+.|+..++...+.+ +++|+|++||++|+.||.+... ..+.+...++++.+++++|| ++... ....
T Consensus 120 ~~~~~~~~~~~~~s~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH-~~~~~--~~~~ 196 (213)
T PF00326_consen 120 GDPWDNPEFYRELSPISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGH-GFGNP--ENRR 196 (213)
T ss_dssp SSTTTSHHHHHHHHHGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SS-STTSH--HHHH
T ss_pred CccchhhhhhhhhccccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCC-CCCCc--hhHH
Confidence 000012233344445556666 8999999999999999987332 23455667799999999999 33321 1223
Q ss_pred cHHHHHHHHHHhhcC
Q 008093 409 WWVRAVNEYLGVLHS 423 (578)
Q Consensus 409 w~~~~v~eFL~~~~~ 423 (578)
.+.+.+.+|+++.++
T Consensus 197 ~~~~~~~~f~~~~l~ 211 (213)
T PF00326_consen 197 DWYERILDFFDKYLK 211 (213)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcC
Confidence 567899999987654
|
; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B .... |
| >TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I | Back alignment and domain information |
|---|
Probab=99.58 E-value=4.8e-14 Score=154.55 Aligned_cols=234 Identities=12% Similarity=0.116 Sum_probs=132.6
Q ss_pred CCcEEEEECCCCCCCccHHH---HHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCch-HHHHHHHHHHHHHCCCCc
Q 008093 159 TTPIAIVIPGLTSDSAASYI---RHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWT-EDAREVIGYLHHEYPKAP 234 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi---~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~-~Dl~~~i~~l~~~~~~~~ 234 (578)
.++.||++||+.+...-.-+ +.+++.|.++||+|+++|+||+|.+..... ...+. +++.++++.+.+..+..+
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~---~ddY~~~~i~~al~~v~~~~g~~k 263 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKT---FDDYIRDGVIAALEVVEAITGEKQ 263 (532)
T ss_pred CCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCC---hhhhHHHHHHHHHHHHHHhcCCCC
Confidence 34568899998432221101 379999999999999999999998743211 11233 568889999988888889
Q ss_pred EEEEEEchHHHHHH----HHHhhc-CCCCCccEEEEEcCCcchhhhhH---HHhhHHHHHHHHHHHHH-------hHHHH
Q 008093 235 LFAIGTSIGANILV----KYLGEE-GEKTPVAGAAAICSPWDLLIGDR---FIGRRLIQKIYDRALTI-------GLQDY 299 (578)
Q Consensus 235 i~lvGhSmGG~ial----~ya~~~-p~~~~V~~~Vlis~p~d~~~~~~---~l~~~~~~~~~~~~l~~-------~l~~~ 299 (578)
++++||||||.++. .+++.. ++ +|+++++++++.|+..... ++....+.. .++.+.. .+...
T Consensus 264 v~lvG~cmGGtl~a~ala~~aa~~~~~--rv~slvll~t~~Df~~~G~l~~f~~~~~~~~-~e~~~~~~G~lpg~~m~~~ 340 (532)
T TIGR01838 264 VNCVGYCIGGTLLSTALAYLAARGDDK--RIKSATFFTTLLDFSDPGELGVFVDEEIVAG-IERQNGGGGYLDGRQMAVT 340 (532)
T ss_pred eEEEEECcCcHHHHHHHHHHHHhCCCC--ccceEEEEecCcCCCCcchhhhhcCchhHHH-HHHHHHhcCCCCHHHHHHH
Confidence 99999999999863 244444 44 7999999999988754311 111110000 0010000 00000
Q ss_pred HhhhcccccccCCHH----HHhccCCHHHHHhhh----hhccCC--C-CCHHHHHHhCC----------cccccCCCccc
Q 008093 300 AQLHEPRYSRLANWE----GIKKSRSIRDFDSHA----TCLVGK--F-ETVDTYYRNCS----------SSTYVGNVSIP 358 (578)
Q Consensus 300 ~~~~~~~l~~~~d~~----~i~~~~s~~efd~~~----~~~~~g--~-~~~~~yy~~~s----------~~~~l~~I~vP 358 (578)
+....+. ..-|. .....+....||-.+ ...+.+ + ..+.++|.+.. ....+.+|++|
T Consensus 341 F~~lrp~---~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g~~~dL~~I~vP 417 (532)
T TIGR01838 341 FSLLREN---DLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEVCGVRLDLSKVKVP 417 (532)
T ss_pred HHhcChh---hHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCeeEECCEecchhhCCCC
Confidence 0000000 00000 000000000111000 000000 0 01122233322 22467889999
Q ss_pred eEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccc
Q 008093 359 LLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEG 402 (578)
Q Consensus 359 vLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg 402 (578)
+|+|.|++|.++|.+.... .....++....+++++||+.+++.
T Consensus 418 vLvV~G~~D~IvP~~sa~~-l~~~i~~~~~~vL~~sGHi~~ien 460 (532)
T TIGR01838 418 VYIIATREDHIAPWQSAYR-GAALLGGPKTFVLGESGHIAGVVN 460 (532)
T ss_pred EEEEeeCCCCcCCHHHHHH-HHHHCCCCEEEEECCCCCchHhhC
Confidence 9999999999999875543 334456778889999999999885
|
This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate [] | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.5e-13 Score=143.93 Aligned_cols=240 Identities=18% Similarity=0.175 Sum_probs=134.1
Q ss_pred CCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeC
Q 008093 118 FSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 197 (578)
Q Consensus 118 ~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~ 197 (578)
.+.++..|+..+ ++|......|+. +.+.|+||++.|+- +-.+.+.+.+.+.+..+|+.++++|.
T Consensus 163 ~~i~~v~iP~eg-~~I~g~LhlP~~--------------~~p~P~VIv~gGlD-s~qeD~~~l~~~~l~~rGiA~LtvDm 226 (411)
T PF06500_consen 163 YPIEEVEIPFEG-KTIPGYLHLPSG--------------EKPYPTVIVCGGLD-SLQEDLYRLFRDYLAPRGIAMLTVDM 226 (411)
T ss_dssp SEEEEEEEEETT-CEEEEEEEESSS--------------SS-EEEEEEE--TT-S-GGGGHHHHHCCCHHCT-EEEEE--
T ss_pred CCcEEEEEeeCC-cEEEEEEEcCCC--------------CCCCCEEEEeCCcc-hhHHHHHHHHHHHHHhCCCEEEEEcc
Confidence 345777777766 777765555432 35779999999994 45555435566678899999999999
Q ss_pred CCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhh
Q 008093 198 RGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIG 275 (578)
Q Consensus 198 RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~ 275 (578)
||.|.|.... ...+...-..++++++...- +..+|.++|.|+||+++.+.|.-+++ +|+|+|+.+++.+-.-.
T Consensus 227 PG~G~s~~~~---l~~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~--RlkavV~~Ga~vh~~ft 301 (411)
T PF06500_consen 227 PGQGESPKWP---LTQDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDP--RLKAVVALGAPVHHFFT 301 (411)
T ss_dssp TTSGGGTTT----S-S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTT--T-SEEEEES---SCGGH
T ss_pred CCCcccccCC---CCcCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhccc--ceeeEeeeCchHhhhhc
Confidence 9999985321 11111233457888887642 35689999999999999999987766 89999999998644332
Q ss_pred hHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcc--ccc-
Q 008093 276 DRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSS--TYV- 352 (578)
Q Consensus 276 ~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~--~~l- 352 (578)
........ ...|...++..+... ..+...+.... . ..|.. ..+
T Consensus 302 ~~~~~~~~-P~my~d~LA~rlG~~-------------------~~~~~~l~~el----~----------~~SLk~qGlL~ 347 (411)
T PF06500_consen 302 DPEWQQRV-PDMYLDVLASRLGMA-------------------AVSDESLRGEL----N----------KFSLKTQGLLS 347 (411)
T ss_dssp -HHHHTTS--HHHHHHHHHHCT-S-------------------CE-HHHHHHHG----G----------GGSTTTTTTTT
T ss_pred cHHHHhcC-CHHHHHHHHHHhCCc-------------------cCCHHHHHHHH----H----------hcCcchhcccc
Confidence 22111111 122222222111000 00011111110 0 01111 123
Q ss_pred -CCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCC-ccccccccccCcccHHHHHHHHHHhh
Q 008093 353 -GNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGG-HLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 353 -~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GG-H~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
.+.++|+|.+++++|+++|.+.... .+..+.+.+...++.+. |.||.. ....+.+||+..
T Consensus 348 ~rr~~~plL~i~~~~D~v~P~eD~~l-ia~~s~~gk~~~~~~~~~~~gy~~--------al~~~~~Wl~~~ 409 (411)
T PF06500_consen 348 GRRCPTPLLAINGEDDPVSPIEDSRL-IAESSTDGKALRIPSKPLHMGYPQ--------ALDEIYKWLEDK 409 (411)
T ss_dssp SS-BSS-EEEEEETT-SSS-HHHHHH-HHHTBTT-EEEEE-SSSHHHHHHH--------HHHHHHHHHHHH
T ss_pred CCCCCcceEEeecCCCCCCCHHHHHH-HHhcCCCCceeecCCCccccchHH--------HHHHHHHHHHHh
Confidence 6678999999999999999876543 34555556666666555 888765 456777787754
|
This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C. |
| >PRK07868 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.9e-13 Score=162.65 Aligned_cols=256 Identities=15% Similarity=0.151 Sum_probs=138.2
Q ss_pred CCcEEEEECCCCCCCccHHHHH-----HHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHH---HHHC
Q 008093 159 TTPIAIVIPGLTSDSAASYIRH-----LVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYL---HHEY 230 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~-----l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l---~~~~ 230 (578)
.+|+||++||+.+ +...| +. ++..|.++||+|+++|+ |.++.. ...+..+..+++..+++.+ +...
T Consensus 66 ~~~plllvhg~~~-~~~~~-d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~-~~~~~~~l~~~i~~l~~~l~~v~~~~ 139 (994)
T PRK07868 66 VGPPVLMVHPMMM-SADMW-DVTRDDGAVGILHRAGLDPWVIDF---GSPDKV-EGGMERNLADHVVALSEAIDTVKDVT 139 (994)
T ss_pred CCCcEEEECCCCC-Cccce-ecCCcccHHHHHHHCCCEEEEEcC---CCCChh-HcCccCCHHHHHHHHHHHHHHHHHhh
Confidence 4577999999954 44434 32 47889999999999995 544332 1112234445555444444 3332
Q ss_pred CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhH-HHhhH--------HHHHHHHH------HHHHh
Q 008093 231 PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDR-FIGRR--------LIQKIYDR------ALTIG 295 (578)
Q Consensus 231 ~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~-~l~~~--------~~~~~~~~------~l~~~ 295 (578)
..+++++||||||.+++.|++.++++ +|+++|++++|.|+..... .+... ....+... .....
T Consensus 140 -~~~v~lvG~s~GG~~a~~~aa~~~~~-~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 217 (994)
T PRK07868 140 -GRDVHLVGYSQGGMFCYQAAAYRRSK-DIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMARTG 217 (994)
T ss_pred -CCceEEEEEChhHHHHHHHHHhcCCC-ccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHHH
Confidence 35899999999999999998865432 7999999999987643210 00000 00000000 00000
Q ss_pred HH-----HHHhhhcccccccCCHHHHhccCCHHHHHhhhhh-ccCC--CC-CHHHHHHhCCc----------ccccCCCc
Q 008093 296 LQ-----DYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATC-LVGK--FE-TVDTYYRNCSS----------STYVGNVS 356 (578)
Q Consensus 296 l~-----~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~-~~~g--~~-~~~~yy~~~s~----------~~~l~~I~ 356 (578)
++ .........+....+.+.........+|...... ...| +. .+..++..... ...+.+|+
T Consensus 218 ~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~~L~~i~ 297 (994)
T PRK07868 218 FQMLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAINGQMVTLADIT 297 (994)
T ss_pred HHhcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccCceEEECCEEcchhhCC
Confidence 00 0000000000001111111000001111100000 0000 11 12233322111 12478999
Q ss_pred cceEEEEeCCCCCCCCCCcchHHHhcCCCEEE-EEeCCCCccccccccccCcccHHHHHHHHHHhhcCC
Q 008093 357 IPLLCISSLDDPVCTVEAIPWDECRANKNVVL-ATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSS 424 (578)
Q Consensus 357 vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l-~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~~ 424 (578)
+|+|+|+|++|+++|++.... .....++..+ .+++++||++++-|....+ .+...+.+||.+....
T Consensus 298 ~P~L~i~G~~D~ivp~~~~~~-l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~-~~wp~i~~wl~~~~~~ 364 (994)
T PRK07868 298 CPVLAFVGEVDDIGQPASVRG-IRRAAPNAEVYESLIRAGHFGLVVGSRAAQ-QTWPTVADWVKWLEGD 364 (994)
T ss_pred CCEEEEEeCCCCCCCHHHHHH-HHHhCCCCeEEEEeCCCCCEeeeechhhhh-hhChHHHHHHHHhccC
Confidence 999999999999999886554 3445677776 6789999999998754433 3457899999986443
|
|
| >PLN00021 chlorophyllase | Back alignment and domain information |
|---|
Probab=99.53 E-value=5.2e-13 Score=138.21 Aligned_cols=115 Identities=19% Similarity=0.175 Sum_probs=84.1
Q ss_pred EEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCC
Q 008093 132 MIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFY 211 (578)
Q Consensus 132 ~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~ 211 (578)
.+.++++.|.. ....|+||++||+.+ ....| ..+++.++++||.|+++|++|++...
T Consensus 38 ~~p~~v~~P~~--------------~g~~PvVv~lHG~~~-~~~~y-~~l~~~Las~G~~VvapD~~g~~~~~------- 94 (313)
T PLN00021 38 PKPLLVATPSE--------------AGTYPVLLFLHGYLL-YNSFY-SQLLQHIASHGFIVVAPQLYTLAGPD------- 94 (313)
T ss_pred CceEEEEeCCC--------------CCCCCEEEEECCCCC-CcccH-HHHHHHHHhCCCEEEEecCCCcCCCC-------
Confidence 45667776643 245799999999965 45556 78899999999999999999975321
Q ss_pred CCCchHHHHHHHHHHHHHC----------CCCcEEEEEEchHHHHHHHHHhhcCCC---CCccEEEEEcCC
Q 008093 212 NAGWTEDAREVIGYLHHEY----------PKAPLFAIGTSIGANILVKYLGEEGEK---TPVAGAAAICSP 269 (578)
Q Consensus 212 ~~~~~~Dl~~~i~~l~~~~----------~~~~i~lvGhSmGG~ial~ya~~~p~~---~~V~~~Vlis~p 269 (578)
.....+|..++++++.... ...+++++||||||.+++.++..+++. .+++++|++++.
T Consensus 95 ~~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv 165 (313)
T PLN00021 95 GTDEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPV 165 (313)
T ss_pred chhhHHHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccc
Confidence 1123456777777776421 225799999999999999999887642 268888888654
|
|
| >COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.4e-13 Score=126.42 Aligned_cols=176 Identities=20% Similarity=0.259 Sum_probs=131.6
Q ss_pred CCCcEEEEECC---CCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCc
Q 008093 158 DTTPIAIVIPG---LTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAP 234 (578)
Q Consensus 158 ~~~PiVVllHG---l~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~ 234 (578)
+.+|+.|+||= ++|+....-+..+++.|.++||.|+.+|+||-|+|.++-+ ...|..+|..++++|++.++|+.+
T Consensus 26 ~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD--~GiGE~~Da~aaldW~~~~hp~s~ 103 (210)
T COG2945 26 PAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFD--NGIGELEDAAAALDWLQARHPDSA 103 (210)
T ss_pred CCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCccc--CCcchHHHHHHHHHHHHhhCCCch
Confidence 67899999984 3344455556788999999999999999999999986532 335788999999999999999888
Q ss_pred E-EEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCH
Q 008093 235 L-FAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANW 313 (578)
Q Consensus 235 i-~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~ 313 (578)
. .+.|+|+||.|++..|.+.++ ....+++.++.+.. +
T Consensus 104 ~~~l~GfSFGa~Ia~~la~r~~e---~~~~is~~p~~~~~---------------d------------------------ 141 (210)
T COG2945 104 SCWLAGFSFGAYIAMQLAMRRPE---ILVFISILPPINAY---------------D------------------------ 141 (210)
T ss_pred hhhhcccchHHHHHHHHHHhccc---ccceeeccCCCCch---------------h------------------------
Confidence 7 788899999999999999877 45566665554210 0
Q ss_pred HHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCC
Q 008093 314 EGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWH 393 (578)
Q Consensus 314 ~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~ 393 (578)
...+.....|.++|+|+.|.+++....-. ........++++++
T Consensus 142 -----------------------------------fs~l~P~P~~~lvi~g~~Ddvv~l~~~l~--~~~~~~~~~i~i~~ 184 (210)
T COG2945 142 -----------------------------------FSFLAPCPSPGLVIQGDADDVVDLVAVLK--WQESIKITVITIPG 184 (210)
T ss_pred -----------------------------------hhhccCCCCCceeEecChhhhhcHHHHHH--hhcCCCCceEEecC
Confidence 01234456899999999998888763322 22336677888999
Q ss_pred CCccccccccccCcccHHHHHHHHHH
Q 008093 394 GGHLAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 394 GGH~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
++|+-+-. -..+.+.+.+|+.
T Consensus 185 a~HFF~gK-----l~~l~~~i~~~l~ 205 (210)
T COG2945 185 ADHFFHGK-----LIELRDTIADFLE 205 (210)
T ss_pred CCceeccc-----HHHHHHHHHHHhh
Confidence 99954322 1247788999985
|
|
| >PLN02442 S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.5e-12 Score=133.33 Aligned_cols=215 Identities=15% Similarity=0.141 Sum_probs=126.2
Q ss_pred eEEEEEec-CCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHH--HHHHHHHhCCceEEEEeC
Q 008093 121 RRQLFRLS-DGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIR--HLVFNTAKRGWNVVVSNH 197 (578)
Q Consensus 121 ~r~~l~~~-DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~--~l~~~l~~~Gy~Vvv~D~ 197 (578)
++..+..+ -|..+.+..+.|+.. .....|+|+++||++|+. ..|.. .+...+...||.|+++|.
T Consensus 19 ~~~~~~s~~l~~~~~~~vy~P~~~------------~~~~~Pvv~~lHG~~~~~-~~~~~~~~~~~~~~~~g~~Vv~pd~ 85 (283)
T PLN02442 19 RRYKHFSSTLGCSMTFSVYFPPAS------------DSGKVPVLYWLSGLTCTD-ENFIQKSGAQRAAAARGIALVAPDT 85 (283)
T ss_pred EEEEEeccccCCceEEEEEcCCcc------------cCCCCCEEEEecCCCcCh-HHHHHhhhHHHHHhhcCeEEEecCC
Confidence 33334333 356677766666421 124679999999996644 33422 234566678999999998
Q ss_pred CCCCCC-CCC--------CCCCC-----------C--CCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcC
Q 008093 198 RGLGGV-SIT--------SDCFY-----------N--AGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEG 255 (578)
Q Consensus 198 RG~G~S-~~~--------~~~~~-----------~--~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p 255 (578)
.++|.- ... ....| . ....+++..+++......+..+++++||||||..++.++.++|
T Consensus 86 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p 165 (283)
T PLN02442 86 SPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNP 165 (283)
T ss_pred CCCCCCCCCCccccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCc
Confidence 776611 000 00001 0 0112444444444333345578999999999999999999998
Q ss_pred CCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCC
Q 008093 256 EKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGK 335 (578)
Q Consensus 256 ~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g 335 (578)
+ .+++++++++..+..... .. ...... +.. .+ ..++.+
T Consensus 166 ~--~~~~~~~~~~~~~~~~~~-~~-----~~~~~~--------~~g---------~~---------~~~~~~-------- 203 (283)
T PLN02442 166 D--KYKSVSAFAPIANPINCP-WG-----QKAFTN--------YLG---------SD---------KADWEE-------- 203 (283)
T ss_pred h--hEEEEEEECCccCcccCc-hh-----hHHHHH--------HcC---------CC---------hhhHHH--------
Confidence 8 899999998876643111 00 000000 000 00 000000
Q ss_pred CCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCC----cchHHHhcCCCEEEEEeCCCCcc
Q 008093 336 FETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEA----IPWDECRANKNVVLATTWHGGHL 397 (578)
Q Consensus 336 ~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~----~~~~~~~~~~~~~l~~~~~GGH~ 397 (578)
+...+....+...++|+++++|++|++++... +.....+...++++.++++++|-
T Consensus 204 -------~d~~~~~~~~~~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~~~~~~~~pg~~H~ 262 (283)
T PLN02442 204 -------YDATELVSKFNDVSATILIDQGEADKFLKEQLLPENFEEACKEAGAPVTLRLQPGYDHS 262 (283)
T ss_pred -------cChhhhhhhccccCCCEEEEECCCCccccccccHHHHHHHHHHcCCCeEEEEeCCCCcc
Confidence 11222334455678999999999999998631 22223455667899999999994
|
|
| >KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.51 E-value=3e-13 Score=142.66 Aligned_cols=286 Identities=17% Similarity=0.202 Sum_probs=177.3
Q ss_pred CCCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHH----HHHHHHHHhCCceE
Q 008093 117 CFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYI----RHLVFNTAKRGWNV 192 (578)
Q Consensus 117 ~~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi----~~l~~~l~~~Gy~V 192 (578)
..+.+.+.+++.||..+.+.-...+ ...+|+|++.||+.++|..+.. +.++..|+++||.|
T Consensus 45 gy~~E~h~V~T~DgYiL~lhRIp~~---------------~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDV 109 (403)
T KOG2624|consen 45 GYPVEEHEVTTEDGYILTLHRIPRG---------------KKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDV 109 (403)
T ss_pred CCceEEEEEEccCCeEEEEeeecCC---------------CCCCCcEEEeeccccccccceecCccccHHHHHHHcCCce
Confidence 4677999999999998887765432 1678999999999877665432 45777899999999
Q ss_pred EEEeCCCCCCCCC-------CCCCCCCCCch----HHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCC-CCCc
Q 008093 193 VVSNHRGLGGVSI-------TSDCFYNAGWT----EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGE-KTPV 260 (578)
Q Consensus 193 vv~D~RG~G~S~~-------~~~~~~~~~~~----~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~-~~~V 260 (578)
..-|.||--.|.. ....++...|. .|+.++|+++.+..+..+++.||||.|+.+...++.+.|+ +.+|
T Consensus 110 WLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI 189 (403)
T KOG2624|consen 110 WLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKI 189 (403)
T ss_pred eeecCcCcccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhh
Confidence 9999999555421 12234444443 4999999999999888999999999999999999988865 2369
Q ss_pred cEEEEEcCCcchhhhhHHHhhHH-------------------------HHHHHHHH-----HHHhHHHHHhhhccccccc
Q 008093 261 AGAAAICSPWDLLIGDRFIGRRL-------------------------IQKIYDRA-----LTIGLQDYAQLHEPRYSRL 310 (578)
Q Consensus 261 ~~~Vlis~p~d~~~~~~~l~~~~-------------------------~~~~~~~~-----l~~~l~~~~~~~~~~l~~~ 310 (578)
+.+++++|..-.......+.... .+.+.... +...+....-.. +. .
T Consensus 190 ~~~~aLAP~~~~k~~~~~~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~---~~-G 265 (403)
T KOG2624|consen 190 KSFIALAPAAFPKHIKSLLNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFL---LV-G 265 (403)
T ss_pred heeeeecchhhhcccccHHHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHH---Hc-C
Confidence 99999988653221100000000 00010100 000000000000 00 0
Q ss_pred CCHHHH------------hcc---CCHHHHHhhhhh---ccCCCC---CHHHHHHhCCcccccCCCccceEEEEeCCCCC
Q 008093 311 ANWEGI------------KKS---RSIRDFDSHATC---LVGKFE---TVDTYYRNCSSSTYVGNVSIPLLCISSLDDPV 369 (578)
Q Consensus 311 ~d~~~i------------~~~---~s~~efd~~~~~---~~~g~~---~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpi 369 (578)
.+...+ ... +.+..|.+.... +.+.+. +...|-+...+...+.+|++|+.+.+|.+|-+
T Consensus 266 ~~~~~~n~~~~~~~~~h~pagtSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l 345 (403)
T KOG2624|consen 266 WNSNNWNTTLLPVYLAHLPAGTSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWL 345 (403)
T ss_pred cchHhhhhcccchhhccCCCCccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCccc
Confidence 000000 011 122222222111 112222 44455555566778999999999999999999
Q ss_pred CCCCCcchHHHhcCCCEE--EEEeCCCCccccccccccCcccHHHHHHHHHHhhc
Q 008093 370 CTVEAIPWDECRANKNVV--LATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 370 vp~~~~~~~~~~~~~~~~--l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~ 422 (578)
+.++.+............ .+.+++=.|+.|+=|.... ..+.+.|++.++...
T Consensus 346 ~~~~DV~~~~~~~~~~~~~~~~~~~~ynHlDFi~g~da~-~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 346 ADPEDVLILLLVLPNSVIKYIVPIPEYNHLDFIWGLDAK-EEVYDPVIERLRLFE 399 (403)
T ss_pred CCHHHHHHHHHhcccccccccccCCCccceeeeeccCcH-HHHHHHHHHHHHhhh
Confidence 999877643333222222 2227888999999875443 367888888888654
|
|
| >KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.50 E-value=7e-13 Score=129.55 Aligned_cols=106 Identities=21% Similarity=0.263 Sum_probs=78.9
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHh-CCceEEEEeCCCCCCCCCCCCCCCC-CCchHHHHHHHHHHHHHCCCCcE
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAK-RGWNVVVSNHRGLGGVSITSDCFYN-AGWTEDAREVIGYLHHEYPKAPL 235 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~-~Gy~Vvv~D~RG~G~S~~~~~~~~~-~~~~~Dl~~~i~~l~~~~~~~~i 235 (578)
...|+++++||. |.|.-.| ..++..+.. ...+|+++|+||||.+......... ..+..|+.++++++-... ..+|
T Consensus 72 t~gpil~l~HG~-G~S~LSf-A~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge~-~~~i 148 (343)
T KOG2564|consen 72 TEGPILLLLHGG-GSSALSF-AIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGEL-PPQI 148 (343)
T ss_pred CCccEEEEeecC-cccchhH-HHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHhccC-CCce
Confidence 567999999998 6666666 667777664 4678999999999999876554333 455678888887776443 3479
Q ss_pred EEEEEchHHHHHHHHHhhcCCCCCccEEEEEc
Q 008093 236 FAIGTSIGANILVKYLGEEGEKTPVAGAAAIC 267 (578)
Q Consensus 236 ~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis 267 (578)
++|||||||.|+...|...--. .+.|++.|+
T Consensus 149 ilVGHSmGGaIav~~a~~k~lp-sl~Gl~viD 179 (343)
T KOG2564|consen 149 ILVGHSMGGAIAVHTAASKTLP-SLAGLVVID 179 (343)
T ss_pred EEEeccccchhhhhhhhhhhch-hhhceEEEE
Confidence 9999999999998776554221 488888885
|
|
| >KOG4667 consensus Predicted esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.7e-13 Score=126.77 Aligned_cols=220 Identities=16% Similarity=0.144 Sum_probs=139.1
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEE
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFA 237 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~l 237 (578)
..+.+||+|||+-++....++..++..+.+.||.++.+|++|.|.|+..-..-.....++|+..+++++.... ..--++
T Consensus 31 gs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~n-r~v~vi 109 (269)
T KOG4667|consen 31 GSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNSN-RVVPVI 109 (269)
T ss_pred CCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccCc-eEEEEE
Confidence 4567899999998777778999999999999999999999999999865321111234599999999997642 112478
Q ss_pred EEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhH-HHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHH
Q 008093 238 IGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDR-FIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGI 316 (578)
Q Consensus 238 vGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~-~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i 316 (578)
+|||-||.+++.|+.++.+ +.-+|-+++-+|....-. .+.+. ...+....++..+-.+.
T Consensus 110 ~gHSkGg~Vvl~ya~K~~d---~~~viNcsGRydl~~~I~eRlg~~----~l~~ike~Gfid~~~rk------------- 169 (269)
T KOG4667|consen 110 LGHSKGGDVVLLYASKYHD---IRNVINCSGRYDLKNGINERLGED----YLERIKEQGFIDVGPRK------------- 169 (269)
T ss_pred EeecCccHHHHHHHHhhcC---chheEEcccccchhcchhhhhccc----HHHHHHhCCceecCccc-------------
Confidence 9999999999999999877 666776666666533210 11111 11111111110000000
Q ss_pred hccCCHHHHHhhhhhccCCCC-CHH--HHHHhCCcccccCCC--ccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEe
Q 008093 317 KKSRSIRDFDSHATCLVGKFE-TVD--TYYRNCSSSTYVGNV--SIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATT 391 (578)
Q Consensus 317 ~~~~s~~efd~~~~~~~~g~~-~~~--~yy~~~s~~~~l~~I--~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~ 391 (578)
. -.+|. +.+ .+.-...+...-.+| +||+|-+||.+|.+||.+.... .++..++-.+.++
T Consensus 170 --G-------------~y~~rvt~eSlmdrLntd~h~aclkId~~C~VLTvhGs~D~IVPve~Ake-fAk~i~nH~L~iI 233 (269)
T KOG4667|consen 170 --G-------------KYGYRVTEESLMDRLNTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKE-FAKIIPNHKLEII 233 (269)
T ss_pred --C-------------CcCceecHHHHHHHHhchhhhhhcCcCccCceEEEeccCCceeechhHHH-HHHhccCCceEEe
Confidence 0 00110 000 111112222233334 7999999999999999987654 5667788899999
Q ss_pred CCCCccccccccccCcccHHHHHHHHHH
Q 008093 392 WHGGHLAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 392 ~~GGH~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
+++.|.-... +........+|..
T Consensus 234 EgADHnyt~~-----q~~l~~lgl~f~k 256 (269)
T KOG4667|consen 234 EGADHNYTGH-----QSQLVSLGLEFIK 256 (269)
T ss_pred cCCCcCccch-----hhhHhhhcceeEE
Confidence 9999964332 2234455555543
|
|
| >PRK11460 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.9e-12 Score=128.75 Aligned_cols=178 Identities=13% Similarity=0.067 Sum_probs=113.7
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCC-CCCC------CCCch-------HHHHHHH
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITS-DCFY------NAGWT-------EDAREVI 223 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~-~~~~------~~~~~-------~Dl~~~i 223 (578)
+.+|+||++||+++ +...+ ..++..+.+.++.+.+++.+|........ ...+ ..... +++.+.+
T Consensus 14 ~~~~~vIlLHG~G~-~~~~~-~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i 91 (232)
T PRK11460 14 PAQQLLLLFHGVGD-NPVAM-GEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETV 91 (232)
T ss_pred CCCcEEEEEeCCCC-ChHHH-HHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHH
Confidence 56789999999954 55445 77889998888777788888764321110 1111 00111 2233445
Q ss_pred HHHHHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHh
Q 008093 224 GYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQ 301 (578)
Q Consensus 224 ~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~ 301 (578)
+++..++ +..+++++|||+||.+++.++...++ .+.+++++++.+..
T Consensus 92 ~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~--~~~~vv~~sg~~~~----------------------------- 140 (232)
T PRK11460 92 RYWQQQSGVGASATALIGFSQGAIMALEAVKAEPG--LAGRVIAFSGRYAS----------------------------- 140 (232)
T ss_pred HHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCC--cceEEEEecccccc-----------------------------
Confidence 5555554 34589999999999999998888776 56666655321100
Q ss_pred hhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcch---H
Q 008093 302 LHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPW---D 378 (578)
Q Consensus 302 ~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~---~ 378 (578)
+ ......++|++++||++|+++|.+.... .
T Consensus 141 -----~------------------------------------------~~~~~~~~pvli~hG~~D~vvp~~~~~~~~~~ 173 (232)
T PRK11460 141 -----L------------------------------------------PETAPTATTIHLIHGGEDPVIDVAHAVAAQEA 173 (232)
T ss_pred -----c------------------------------------------cccccCCCcEEEEecCCCCccCHHHHHHHHHH
Confidence 0 0001136899999999999999875432 2
Q ss_pred HHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcC
Q 008093 379 ECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHS 423 (578)
Q Consensus 379 ~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~ 423 (578)
+.....++++..++++||..--+ ..+.+.+||.+...
T Consensus 174 L~~~g~~~~~~~~~~~gH~i~~~--------~~~~~~~~l~~~l~ 210 (232)
T PRK11460 174 LISLGGDVTLDIVEDLGHAIDPR--------LMQFALDRLRYTVP 210 (232)
T ss_pred HHHCCCCeEEEEECCCCCCCCHH--------HHHHHHHHHHHHcc
Confidence 23345678899999999965332 45677777776653
|
|
| >TIGR02821 fghA_ester_D S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.46 E-value=9.7e-12 Score=126.81 Aligned_cols=207 Identities=13% Similarity=0.103 Sum_probs=116.7
Q ss_pred CCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHH-H-HHHHHHhCCceEEEEeC--CCCCCCC
Q 008093 129 DGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIR-H-LVFNTAKRGWNVVVSNH--RGLGGVS 204 (578)
Q Consensus 129 DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~-~-l~~~l~~~Gy~Vvv~D~--RG~G~S~ 204 (578)
.|..+.+.++.|+.. ...+.|+|+++||++++. ..|.. . +...+.+.||.|+++|. ||+|.+.
T Consensus 23 ~~~~~~~~v~~P~~~------------~~~~~P~vvllHG~~~~~-~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~ 89 (275)
T TIGR02821 23 CGVPMTFGVFLPPQA------------AAGPVPVLWYLSGLTCTH-ENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAG 89 (275)
T ss_pred cCCceEEEEEcCCCc------------cCCCCCEEEEccCCCCCc-cHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCC
Confidence 455566666666431 023479999999996544 43422 2 22344457999999998 6665432
Q ss_pred CCC-------CCCC----------CCCchHHH-HHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEE
Q 008093 205 ITS-------DCFY----------NAGWTEDA-REVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAA 264 (578)
Q Consensus 205 ~~~-------~~~~----------~~~~~~Dl-~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~V 264 (578)
... ...| ...+.+.+ .++...+.+.+ ...+++++||||||.+++.++.++|+ .+++++
T Consensus 90 ~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~--~~~~~~ 167 (275)
T TIGR02821 90 EDDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPD--RFKSVS 167 (275)
T ss_pred CcccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcc--cceEEE
Confidence 110 0000 00112232 23333444444 34589999999999999999999998 789999
Q ss_pred EEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHH
Q 008093 265 AICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYR 344 (578)
Q Consensus 265 lis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~ 344 (578)
++++..+..... .. . . .+..++.. +. . .+.. .+...+..
T Consensus 168 ~~~~~~~~~~~~-~~-----~----~----~~~~~l~~---------~~------~---~~~~---------~~~~~~~~ 206 (275)
T TIGR02821 168 AFAPIVAPSRCP-WG-----Q----K----AFSAYLGA---------DE------A---AWRS---------YDASLLVA 206 (275)
T ss_pred EECCccCcccCc-ch-----H----H----HHHHHhcc---------cc------c---chhh---------cchHHHHh
Confidence 988776542110 00 0 0 00111100 00 0 0000 00001100
Q ss_pred hCCcccccCCCccceEEEEeCCCCCCCCC-C---cchHHHhcCCCEEEEEeCCCCccc
Q 008093 345 NCSSSTYVGNVSIPLLCISSLDDPVCTVE-A---IPWDECRANKNVVLATTWHGGHLA 398 (578)
Q Consensus 345 ~~s~~~~l~~I~vPvLiI~g~dDpivp~~-~---~~~~~~~~~~~~~l~~~~~GGH~~ 398 (578)
. .+...|+++.+|++|++++.+ . +...+.+...++++.++++.+|--
T Consensus 207 ------~-~~~~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~~v~~~~~~g~~H~f 257 (275)
T TIGR02821 207 ------D-GGRHSTILIDQGTADQFLDEQLRPDAFEQACRAAGQALTLRRQAGYDHSY 257 (275)
T ss_pred ------h-cccCCCeeEeecCCCcccCccccHHHHHHHHHHcCCCeEEEEeCCCCccc
Confidence 1 124679999999999999973 2 233345566778999999999943
|
This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well. |
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.9e-12 Score=147.43 Aligned_cols=223 Identities=14% Similarity=0.095 Sum_probs=149.7
Q ss_pred CeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCC
Q 008093 119 SYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHR 198 (578)
Q Consensus 119 ~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~R 198 (578)
.-++..++..||..|.+.+..+++.. .+...|+||++||..+.+....+......+.++||.|+..|.|
T Consensus 415 ~~e~v~~~s~DG~~Ip~~l~~~~~~~-----------~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~R 483 (686)
T PRK10115 415 RSEHLWITARDGVEVPVSLVYHRKHF-----------RKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVR 483 (686)
T ss_pred EEEEEEEECCCCCEEEEEEEEECCCC-----------CCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcC
Confidence 44556677889999998666654311 1245699999999777665433355566788999999999999
Q ss_pred CCCCCCCCC----CCCCCCCchHHHHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcch
Q 008093 199 GLGGVSITS----DCFYNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (578)
Q Consensus 199 G~G~S~~~~----~~~~~~~~~~Dl~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~ 272 (578)
|-|+-...- .........+|+.++++++.++. ...++.+.|.|.||.++...+.++|+ .++++|+..+..|+
T Consensus 484 Gs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pd--lf~A~v~~vp~~D~ 561 (686)
T PRK10115 484 GGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPE--LFHGVIAQVPFVDV 561 (686)
T ss_pred CCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChh--heeEEEecCCchhH
Confidence 976542110 01111134589999999998764 35689999999999999999999998 89999998888776
Q ss_pred hhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCC---CCHHHHHHhCCcc
Q 008093 273 LIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKF---ETVDTYYRNCSSS 349 (578)
Q Consensus 273 ~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~---~~~~~yy~~~s~~ 349 (578)
...... +.++ ....++.+ .|. +...+|+...|+.
T Consensus 562 ~~~~~~--------------------------~~~p-----------~~~~~~~e------~G~p~~~~~~~~l~~~SP~ 598 (686)
T PRK10115 562 VTTMLD--------------------------ESIP-----------LTTGEFEE------WGNPQDPQYYEYMKSYSPY 598 (686)
T ss_pred hhhccc--------------------------CCCC-----------CChhHHHH------hCCCCCHHHHHHHHHcCch
Confidence 421000 0000 00001111 111 1234567778999
Q ss_pred cccCCCccc-eEEEEeCCCCCCCCCCcch---HHHhcCCCEEEEEe---CCCCcc
Q 008093 350 TYVGNVSIP-LLCISSLDDPVCTVEAIPW---DECRANKNVVLATT---WHGGHL 397 (578)
Q Consensus 350 ~~l~~I~vP-vLiI~g~dDpivp~~~~~~---~~~~~~~~~~l~~~---~~GGH~ 397 (578)
..+.+++.| +|+++|.+|+-||+..... .+.....+..++++ +++||-
T Consensus 599 ~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg 653 (686)
T PRK10115 599 DNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHG 653 (686)
T ss_pred hccCccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCC
Confidence 999999999 5677999999999874332 22333444555566 899996
|
|
| >TIGR01840 esterase_phb esterase, PHB depolymerase family | Back alignment and domain information |
|---|
Probab=99.42 E-value=6.8e-12 Score=122.85 Aligned_cols=110 Identities=15% Similarity=0.199 Sum_probs=81.5
Q ss_pred CCCcEEEEECCCCCCCccHHHH--HHHHHHHhCCceEEEEeCCCCCCCCCCCC------CCCCCCchHHHHHHHHHHHHH
Q 008093 158 DTTPIAIVIPGLTSDSAASYIR--HLVFNTAKRGWNVVVSNHRGLGGVSITSD------CFYNAGWTEDAREVIGYLHHE 229 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~--~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~------~~~~~~~~~Dl~~~i~~l~~~ 229 (578)
...|+||++||.++ +...|.. .+...+.+.||.|+++|+||++.+..... .....+...|+.++++++.++
T Consensus 11 ~~~P~vv~lHG~~~-~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 89 (212)
T TIGR01840 11 GPRALVLALHGCGQ-TASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKAN 89 (212)
T ss_pred CCCCEEEEeCCCCC-CHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHh
Confidence 46799999999854 4444421 34555666899999999999876432110 011123467899999999888
Q ss_pred CC--CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 230 YP--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 230 ~~--~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
++ ..+++++||||||.+++.++.++++ .+.+++.++++.
T Consensus 90 ~~id~~~i~l~G~S~Gg~~a~~~a~~~p~--~~~~~~~~~g~~ 130 (212)
T TIGR01840 90 YSIDPNRVYVTGLSAGGGMTAVLGCTYPD--VFAGGASNAGLP 130 (212)
T ss_pred cCcChhheEEEEECHHHHHHHHHHHhCch--hheEEEeecCCc
Confidence 74 3589999999999999999999988 788888888654
|
This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi. |
| >COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.41 E-value=5.9e-12 Score=122.51 Aligned_cols=101 Identities=14% Similarity=0.232 Sum_probs=69.1
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhC--CceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEE
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKR--GWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFA 237 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~--Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~l 237 (578)
.|.++++||+.++...+. . ....+... .|+++++|+||||.|. . .......+.+|+..+++ ..+..++++
T Consensus 21 ~~~i~~~hg~~~~~~~~~-~-~~~~~~~~~~~~~~~~~d~~g~g~s~-~-~~~~~~~~~~~~~~~~~----~~~~~~~~l 92 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWR-P-VFKVLPALAARYRVIAPDLRGHGRSD-P-AGYSLSAYADDLAALLD----ALGLEKVVL 92 (282)
T ss_pred CCeEEEeCCCCCchhhhH-H-HHHHhhccccceEEEEecccCCCCCC-c-ccccHHHHHHHHHHHHH----HhCCCceEE
Confidence 457999999976555433 3 11222221 1999999999999987 1 10001111344444444 344456999
Q ss_pred EEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 238 IGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 238 vGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
+||||||.+++.++..+|+ .+.++|+++++.
T Consensus 93 ~G~S~Gg~~~~~~~~~~p~--~~~~~v~~~~~~ 123 (282)
T COG0596 93 VGHSMGGAVALALALRHPD--RVRGLVLIGPAP 123 (282)
T ss_pred EEecccHHHHHHHHHhcch--hhheeeEecCCC
Confidence 9999999999999999998 899999999764
|
|
| >COG4757 Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.40 E-value=9.9e-13 Score=125.31 Aligned_cols=248 Identities=20% Similarity=0.236 Sum_probs=139.1
Q ss_pred EEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCC
Q 008093 123 QLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGG 202 (578)
Q Consensus 123 ~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~ 202 (578)
..+..+||..+..+.+.... ..+--+++.|-+|-....| +.++..++++||.|+.+|+||.|.
T Consensus 8 ~~l~~~DG~~l~~~~~pA~~----------------~~~g~~~va~a~Gv~~~fY-RrfA~~a~~~Gf~Vlt~dyRG~g~ 70 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPADG----------------KASGRLVVAGATGVGQYFY-RRFAAAAAKAGFEVLTFDYRGIGQ 70 (281)
T ss_pred cccccCCCccCccccccCCC----------------CCCCcEEecccCCcchhHh-HHHHHHhhccCceEEEEecccccC
Confidence 45678899999877765422 2222345555556445444 999999999999999999999999
Q ss_pred CCCCCCCCCC---CCch-HHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcC--Ccchhhhh
Q 008093 203 VSITSDCFYN---AGWT-EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICS--PWDLLIGD 276 (578)
Q Consensus 203 S~~~~~~~~~---~~~~-~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~--p~d~~~~~ 276 (578)
|..+...-.. .+|. .|+.++++.+++..+..+.+.|||||||.+... +++++ ++.+....+. .|.....
T Consensus 71 S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL-~~~~~---k~~a~~vfG~gagwsg~m~- 145 (281)
T COG4757 71 SRPASLSGSQWRYLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALGL-LGQHP---KYAAFAVFGSGAGWSGWMG- 145 (281)
T ss_pred CCccccccCccchhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeecc-cccCc---ccceeeEeccccccccchh-
Confidence 9776544222 2343 699999999999888999999999999987753 44443 2434333332 2211110
Q ss_pred HHHhhHHHHHHHHHHHHHhHHHHHhhhcc-cccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCC
Q 008093 277 RFIGRRLIQKIYDRALTIGLQDYAQLHEP-RYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNV 355 (578)
Q Consensus 277 ~~l~~~~~~~~~~~~l~~~l~~~~~~~~~-~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I 355 (578)
..++.....+++ +......+.+...+ .+....+ -....-+++|......+..-|.+...- ......+++
T Consensus 146 -~~~~l~~~~l~~--lv~p~lt~w~g~~p~~l~G~G~---d~p~~v~RdW~RwcR~p~y~fddp~~~----~~~q~yaaV 215 (281)
T COG4757 146 -LRERLGAVLLWN--LVGPPLTFWKGYMPKDLLGLGS---DLPGTVMRDWARWCRHPRYYFDDPAMR----NYRQVYAAV 215 (281)
T ss_pred -hhhcccceeecc--ccccchhhccccCcHhhcCCCc---cCcchHHHHHHHHhcCccccccChhHh----HHHHHHHHh
Confidence 000000000000 00000000000000 0000000 011233455554443332323221110 012345678
Q ss_pred ccceEEEEeCCCCCCCCCCcchH-HHhcCCCEEEEEeCCC----Cccccccc
Q 008093 356 SIPLLCISSLDDPVCTVEAIPWD-ECRANKNVVLATTWHG----GHLAFFEG 402 (578)
Q Consensus 356 ~vPvLiI~g~dDpivp~~~~~~~-~~~~~~~~~l~~~~~G----GH~~~~eg 402 (578)
++|+.++...||+.+|+.+.... ..-.+..++...++.. ||++++..
T Consensus 216 rtPi~~~~~~DD~w~P~As~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~ 267 (281)
T COG4757 216 RTPITFSRALDDPWAPPASRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFRE 267 (281)
T ss_pred cCceeeeccCCCCcCCHHHHHHHHHhhhcCcccceecCcccCcccchhhhcc
Confidence 99999999999999998865532 2234445555555544 99999974
|
|
| >PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively [] | Back alignment and domain information |
|---|
Probab=99.40 E-value=9.2e-13 Score=134.10 Aligned_cols=130 Identities=18% Similarity=0.161 Sum_probs=92.6
Q ss_pred CCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHH--HH------HHHHhCCceEEEEeCCCC
Q 008093 129 DGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRH--LV------FNTAKRGWNVVVSNHRGL 200 (578)
Q Consensus 129 DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~--l~------~~l~~~Gy~Vvv~D~RG~ 200 (578)
||.+|+.|.+.| .. ......|+||..|++..+.....-.. .. ..++++||.||+.|.||.
T Consensus 1 DGv~L~adv~~P-~~-----------~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~ 68 (272)
T PF02129_consen 1 DGVRLAADVYRP-GA-----------DGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGT 68 (272)
T ss_dssp TS-EEEEEEEEE--------------TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTS
T ss_pred CCCEEEEEEEec-CC-----------CCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCccc
Confidence 899999999988 21 11467799999999954331111011 01 128899999999999999
Q ss_pred CCCCCCCCCCCCCCchHHHHHHHHHHHHHCC--CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhh
Q 008093 201 GGVSITSDCFYNAGWTEDAREVIGYLHHEYP--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLI 274 (578)
Q Consensus 201 G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~--~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~ 274 (578)
|.|++..... .....+|..++|+++.++ | +.+|.++|.|++|...+..|+..+. .+++++..++..|...
T Consensus 69 g~S~G~~~~~-~~~e~~D~~d~I~W~~~Q-pws~G~VGm~G~SY~G~~q~~~A~~~~p--~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 69 GGSEGEFDPM-SPNEAQDGYDTIEWIAAQ-PWSNGKVGMYGISYGGFTQWAAAARRPP--HLKAIVPQSGWSDLYR 140 (272)
T ss_dssp TTS-S-B-TT-SHHHHHHHHHHHHHHHHC-TTEEEEEEEEEETHHHHHHHHHHTTT-T--TEEEEEEESE-SBTCC
T ss_pred ccCCCccccC-ChhHHHHHHHHHHHHHhC-CCCCCeEEeeccCHHHHHHHHHHhcCCC--CceEEEecccCCcccc
Confidence 9998764332 334568999999999887 5 4589999999999999999997777 7999999998887765
|
It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A .... |
| >PRK10162 acetyl esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=3.1e-11 Score=125.71 Aligned_cols=247 Identities=11% Similarity=0.024 Sum_probs=138.1
Q ss_pred CCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCC--CCCccHHHHHHHHHHHh-CCceEEE
Q 008093 118 FSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLT--SDSAASYIRHLVFNTAK-RGWNVVV 194 (578)
Q Consensus 118 ~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~--G~s~~~yi~~l~~~l~~-~Gy~Vvv 194 (578)
+.-+...+...+| .+.++++.|.. ...|+||++||.+ .++...+ ..++..+++ .|+.|+.
T Consensus 55 ~~~~~~~i~~~~g-~i~~~~y~P~~---------------~~~p~vv~~HGGg~~~g~~~~~-~~~~~~la~~~g~~Vv~ 117 (318)
T PRK10162 55 MATRAYMVPTPYG-QVETRLYYPQP---------------DSQATLFYLHGGGFILGNLDTH-DRIMRLLASYSGCTVIG 117 (318)
T ss_pred ceEEEEEEecCCC-ceEEEEECCCC---------------CCCCEEEEEeCCcccCCCchhh-hHHHHHHHHHcCCEEEE
Confidence 3334445666666 58889988732 3468999999943 1233334 456677766 5999999
Q ss_pred EeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH---C--CCCcEEEEEEchHHHHHHHHHhhcCC----CCCccEEEE
Q 008093 195 SNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHE---Y--PKAPLFAIGTSIGANILVKYLGEEGE----KTPVAGAAA 265 (578)
Q Consensus 195 ~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~---~--~~~~i~lvGhSmGG~ial~ya~~~p~----~~~V~~~Vl 265 (578)
+|||.....+ +. ...+|+.++++++.+. + +..+++++|+|+||++++.++....+ ...+.++++
T Consensus 118 vdYrlape~~------~p-~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl 190 (318)
T PRK10162 118 IDYTLSPEAR------FP-QAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLL 190 (318)
T ss_pred ecCCCCCCCC------CC-CcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEE
Confidence 9999765432 11 2468899998888653 3 34689999999999999988764321 136889999
Q ss_pred EcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHh
Q 008093 266 ICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRN 345 (578)
Q Consensus 266 is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~ 345 (578)
+++..+....... ..+. .... ..... .+..+...+........+ -+
T Consensus 191 ~~p~~~~~~~~s~-------~~~~---------------~~~~-~l~~~------~~~~~~~~y~~~~~~~~~--p~--- 236 (318)
T PRK10162 191 WYGLYGLRDSVSR-------RLLG---------------GVWD-GLTQQ------DLQMYEEAYLSNDADRES--PY--- 236 (318)
T ss_pred ECCccCCCCChhH-------HHhC---------------CCcc-ccCHH------HHHHHHHHhCCCccccCC--cc---
Confidence 9887765321000 0000 0000 00000 000011111000000000 00
Q ss_pred CCcc-cccCCCccceEEEEeCCCCCCCCC-CcchHHHhcCCCEEEEEeCCCCcccccc-ccccCcccHHHHHHHHHHhhc
Q 008093 346 CSSS-TYVGNVSIPLLCISSLDDPVCTVE-AIPWDECRANKNVVLATTWHGGHLAFFE-GLTAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 346 ~s~~-~~l~~I~vPvLiI~g~dDpivp~~-~~~~~~~~~~~~~~l~~~~~GGH~~~~e-g~~~~~~w~~~~v~eFL~~~~ 422 (578)
.++. ..+.+--.|+++++|+.|++.+.. .+...+.+..-.+++.+++++.|--+.- +..+......+.+.+||.+..
T Consensus 237 ~~p~~~~l~~~lPp~~i~~g~~D~L~de~~~~~~~L~~aGv~v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~ 316 (318)
T PRK10162 237 YCLFNNDLTRDVPPCFIAGAEFDPLLDDSRLLYQTLAAHQQPCEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQL 316 (318)
T ss_pred cCcchhhhhcCCCCeEEEecCCCcCcChHHHHHHHHHHcCCCEEEEEECCCceehhhccCchHHHHHHHHHHHHHHHHHh
Confidence 0000 112122369999999999998643 2233345566679999999999943222 111222234566777776653
|
|
| >PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins | Back alignment and domain information |
|---|
Probab=99.38 E-value=5.4e-12 Score=130.87 Aligned_cols=245 Identities=18% Similarity=0.135 Sum_probs=133.8
Q ss_pred CCCCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEE
Q 008093 116 PCFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVS 195 (578)
Q Consensus 116 ~~~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~ 195 (578)
+.+.+.+..+...+|..|....+.|... ....|.||.+||.++.+.. + ...+ .++.+||.|+.+
T Consensus 52 ~~~~vy~v~f~s~~g~~V~g~l~~P~~~-------------~~~~Pavv~~hGyg~~~~~-~-~~~~-~~a~~G~~vl~~ 115 (320)
T PF05448_consen 52 PGVEVYDVSFESFDGSRVYGWLYRPKNA-------------KGKLPAVVQFHGYGGRSGD-P-FDLL-PWAAAGYAVLAM 115 (320)
T ss_dssp SSEEEEEEEEEEGGGEEEEEEEEEES-S-------------SSSEEEEEEE--TT--GGG-H-HHHH-HHHHTT-EEEEE
T ss_pred CCEEEEEEEEEccCCCEEEEEEEecCCC-------------CCCcCEEEEecCCCCCCCC-c-cccc-ccccCCeEEEEe
Confidence 3456666777888999998766666421 3567999999999665443 3 2222 467789999999
Q ss_pred eCCCCCCCCCCC--------CCCCCC------------CchHHHHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhh
Q 008093 196 NHRGLGGVSITS--------DCFYNA------------GWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGE 253 (578)
Q Consensus 196 D~RG~G~S~~~~--------~~~~~~------------~~~~Dl~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~ 253 (578)
|.||+|+..... ...... +...|...+++++...- +..+|.+.|.|+||.+++..|+-
T Consensus 116 d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaL 195 (320)
T PF05448_consen 116 DVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAAL 195 (320)
T ss_dssp --TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHH
T ss_pred cCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHh
Confidence 999999422110 000000 12368888899988653 35689999999999999999988
Q ss_pred cCCCCCccEEEEEcCCc-chhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhc
Q 008093 254 EGEKTPVAGAAAICSPW-DLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCL 332 (578)
Q Consensus 254 ~p~~~~V~~~Vlis~p~-d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~ 332 (578)
.+ +|+++++..|.+ |.......-... .-| ..+..+.+...+.- ....+.-+
T Consensus 196 d~---rv~~~~~~vP~l~d~~~~~~~~~~~---~~y-----~~~~~~~~~~d~~~------------~~~~~v~~----- 247 (320)
T PF05448_consen 196 DP---RVKAAAADVPFLCDFRRALELRADE---GPY-----PEIRRYFRWRDPHH------------EREPEVFE----- 247 (320)
T ss_dssp SS---T-SEEEEESESSSSHHHHHHHT--S---TTT-----HHHHHHHHHHSCTH------------CHHHHHHH-----
T ss_pred Cc---cccEEEecCCCccchhhhhhcCCcc---ccH-----HHHHHHHhccCCCc------------ccHHHHHH-----
Confidence 75 599988887643 322111000000 000 01112221110000 00000000
Q ss_pred cCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHH
Q 008093 333 VGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVR 412 (578)
Q Consensus 333 ~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~ 412 (578)
...| .+..+..+.|++|+++-.|..|++||+...-.........+++.+++.+||-..-+ +-.+
T Consensus 248 ------~L~Y---~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~vyp~~~He~~~~-------~~~~ 311 (320)
T PF05448_consen 248 ------TLSY---FDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPGPKELVVYPEYGHEYGPE-------FQED 311 (320)
T ss_dssp ------HHHT---T-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--SSEEEEEETT--SSTTHH-------HHHH
T ss_pred ------HHhh---hhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCCCeeEEeccCcCCCchhh-------HHHH
Confidence 0011 12345677899999999999999999985432222334568999999999954332 2367
Q ss_pred HHHHHHHh
Q 008093 413 AVNEYLGV 420 (578)
Q Consensus 413 ~v~eFL~~ 420 (578)
...+||.+
T Consensus 312 ~~~~~l~~ 319 (320)
T PF05448_consen 312 KQLNFLKE 319 (320)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 78888764
|
Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F .... |
| >PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway | Back alignment and domain information |
|---|
Probab=99.31 E-value=9.5e-12 Score=122.22 Aligned_cols=186 Identities=15% Similarity=0.111 Sum_probs=114.9
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCC-CCCCCCC---CC----C---CCchHHHHHHHHHH
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGG-VSITSDC---FY----N---AGWTEDAREVIGYL 226 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~-S~~~~~~---~~----~---~~~~~Dl~~~i~~l 226 (578)
.+.|.||++|++.|-. .+++.++..|+++||.|+++|+-+-.. ....... .. . .....|+.++++++
T Consensus 12 ~~~~~Vvv~~d~~G~~--~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l 89 (218)
T PF01738_consen 12 GPRPAVVVIHDIFGLN--PNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYL 89 (218)
T ss_dssp SSEEEEEEE-BTTBS---HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCc--hHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 3678999999997644 456899999999999999999755433 1111110 00 0 11236788889999
Q ss_pred HHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhc
Q 008093 227 HHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHE 304 (578)
Q Consensus 227 ~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~ 304 (578)
+.+. ...++.++|+|+||.+++.++.+. + .++++|..-++....
T Consensus 90 ~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~--~~~a~v~~yg~~~~~------------------------------- 135 (218)
T PF01738_consen 90 RAQPEVDPGKIGVVGFCWGGKLALLLAARD-P--RVDAAVSFYGGSPPP------------------------------- 135 (218)
T ss_dssp HCTTTCEEEEEEEEEETHHHHHHHHHHCCT-T--TSSEEEEES-SSSGG-------------------------------
T ss_pred HhccccCCCcEEEEEEecchHHhhhhhhhc-c--ccceEEEEcCCCCCC-------------------------------
Confidence 8765 356899999999999999988877 3 588988775411000
Q ss_pred ccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcch---HHHh
Q 008093 305 PRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPW---DECR 381 (578)
Q Consensus 305 ~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~---~~~~ 381 (578)
.......++++|+|+++|++|+.++.+.... .+..
T Consensus 136 ------------------------------------------~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~ 173 (218)
T PF01738_consen 136 ------------------------------------------PPLEDAPKIKAPVLILFGENDPFFPPEEVEALEEALKA 173 (218)
T ss_dssp ------------------------------------------GHHHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHC
T ss_pred ------------------------------------------cchhhhcccCCCEeecCccCCCCCChHHHHHHHHHHHh
Confidence 0012244578999999999999999875332 2334
Q ss_pred cCCCEEEEEeCCCCcccccccccc-Cc---ccHHHHHHHHHHhh
Q 008093 382 ANKNVVLATTWHGGHLAFFEGLTA-AG---MWWVRAVNEYLGVL 421 (578)
Q Consensus 382 ~~~~~~l~~~~~GGH~~~~eg~~~-~~---~w~~~~v~eFL~~~ 421 (578)
.....++.++++++|--......+ ++ ....+.+.+||++.
T Consensus 174 ~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 174 AGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp TTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC-
T ss_pred cCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhc
Confidence 578899999999999433332111 11 12346777777653
|
Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A. |
| >PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function | Back alignment and domain information |
|---|
Probab=99.27 E-value=8.7e-11 Score=118.71 Aligned_cols=245 Identities=20% Similarity=0.231 Sum_probs=96.7
Q ss_pred CCcEEEEECCCCCCCcc-HHHHHHHHHHHhCCceEEEEeCC----CCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC---
Q 008093 159 TTPIAIVIPGLTSDSAA-SYIRHLVFNTAKRGWNVVVSNHR----GLGGVSITSDCFYNAGWTEDAREVIGYLHHEY--- 230 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~-~yi~~l~~~l~~~Gy~Vvv~D~R----G~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~--- 230 (578)
...+|||+.|++.+-.. .|+..++..|.+.||.++-+.++ |+|-+.+ ...++|+.++|+|++...
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~SL-------~~D~~eI~~~v~ylr~~~~g~ 104 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTSSL-------DRDVEEIAQLVEYLRSEKGGH 104 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S--H-------HHHHHHHHHHHHHHHHHS---
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcchh-------hhHHHHHHHHHHHHHHhhccc
Confidence 44579999999766554 78899999998889999999865 4444332 245789999999999883
Q ss_pred -CCCcEEEEEEchHHHHHHHHHhhcCC---CCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhc--
Q 008093 231 -PKAPLFAIGTSIGANILVKYLGEEGE---KTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHE-- 304 (578)
Q Consensus 231 -~~~~i~lvGhSmGG~ial~ya~~~p~---~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~-- 304 (578)
...+|+++|||-|..-++.|+..... ..+|+|+|+-+|..|-+........ +..+.+.+... ++.+...+
T Consensus 105 ~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~---~~~~~~~v~~A-~~~i~~g~~~ 180 (303)
T PF08538_consen 105 FGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGE---REAYEELVALA-KELIAEGKGD 180 (303)
T ss_dssp ---S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH------HHHHHHHH-HHHHHCT-TT
T ss_pred cCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccc---hHHHHHHHHHH-HHHHHcCCCC
Confidence 56799999999999999999987643 3489999999988776544332221 01122211111 11111111
Q ss_pred ccccccCCHHHH-hccCCHHHHHhhhhhccCCCCCHHHHHHhCC----cccccCCCccceEEEEeCCCCCCCCCCc----
Q 008093 305 PRYSRLANWEGI-KKSRSIRDFDSHATCLVGKFETVDTYYRNCS----SSTYVGNVSIPLLCISSLDDPVCTVEAI---- 375 (578)
Q Consensus 305 ~~l~~~~d~~~i-~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s----~~~~l~~I~vPvLiI~g~dDpivp~~~~---- 375 (578)
..++........ ...-+-..|... .....-++|+...- ....+.+|+.|+|++.|.+|.+||...-
T Consensus 181 ~~lp~~~~~~~~~~~PiTA~Rf~SL-----~s~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEyvP~~vdk~~L 255 (303)
T PF08538_consen 181 EILPREFTPLVFYDTPITAYRFLSL-----ASPGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEYVPPWVDKEAL 255 (303)
T ss_dssp -GG----GGTTT-SS---HHHHHT------S-SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT-----------
T ss_pred ceeeccccccccCCCcccHHHHHhc-----cCCCCcccccCCCCCHHHHHHHhccCCCceEEEecCCCceeccccccccc
Confidence 001000000000 000111111111 11123334443321 1235677888999999999999997521
Q ss_pred -chHHHhcCC---CEEEEEeCCCCccccccccccCcccHHHHHHHHHH
Q 008093 376 -PWDECRANK---NVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 376 -~~~~~~~~~---~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
.+.....++ .....+++++.|..--++-.....|+.++|..||+
T Consensus 256 l~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 256 LERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp ------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 111111111 12245889999965433211113488999999974
|
This family contains many hypothetical proteins. ; PDB: 2Q0X_B. |
| >TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II | Back alignment and domain information |
|---|
Probab=99.27 E-value=4.9e-11 Score=129.77 Aligned_cols=108 Identities=14% Similarity=0.124 Sum_probs=83.9
Q ss_pred CcEEEEECCCCCCCccHHH------HHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCC
Q 008093 160 TPIAIVIPGLTSDSAASYI------RHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKA 233 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi------~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~ 233 (578)
+..||++|.+- ...|| ++++++|.++||.|+++|+++-+... ......++.+.+.++++.+++..+..
T Consensus 215 ~~PLLIVPp~I---NK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~---r~~~ldDYv~~i~~Ald~V~~~tG~~ 288 (560)
T TIGR01839 215 ARPLLVVPPQI---NKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAH---REWGLSTYVDALKEAVDAVRAITGSR 288 (560)
T ss_pred CCcEEEechhh---hhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhh---cCCCHHHHHHHHHHHHHHHHHhcCCC
Confidence 34588999873 33454 67899999999999999999866542 11111344568889999999988889
Q ss_pred cEEEEEEchHHHHHHH----HHhhcCCCCCccEEEEEcCCcchhh
Q 008093 234 PLFAIGTSIGANILVK----YLGEEGEKTPVAGAAAICSPWDLLI 274 (578)
Q Consensus 234 ~i~lvGhSmGG~ial~----ya~~~p~~~~V~~~Vlis~p~d~~~ 274 (578)
++.++|+||||.+++. |++.+++. +|+.++++.+|.|+..
T Consensus 289 ~vnl~GyC~GGtl~a~~~a~~aA~~~~~-~V~sltllatplDf~~ 332 (560)
T TIGR01839 289 DLNLLGACAGGLTCAALVGHLQALGQLR-KVNSLTYLVSLLDSTM 332 (560)
T ss_pred CeeEEEECcchHHHHHHHHHHHhcCCCC-ceeeEEeeecccccCC
Confidence 9999999999999987 67776632 7999999999999764
|
This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.5e-10 Score=113.73 Aligned_cols=182 Identities=22% Similarity=0.171 Sum_probs=98.9
Q ss_pred CCCCcEEEEECCCCCCCccHHHHHHHH-HHHhCCceEEEEeCCC------CCCC--CCCCCCCCC-CC--chHH------
Q 008093 157 DDTTPIAIVIPGLTSDSAASYIRHLVF-NTAKRGWNVVVSNHRG------LGGV--SITSDCFYN-AG--WTED------ 218 (578)
Q Consensus 157 ~~~~PiVVllHGl~G~s~~~yi~~l~~-~l~~~Gy~Vvv~D~RG------~G~S--~~~~~~~~~-~~--~~~D------ 218 (578)
++.+|+||++||+ |++...+ ..+.. .+.....+++.++-+- .|.. ..-...... .. ..++
T Consensus 11 ~~~~~lvi~LHG~-G~~~~~~-~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~ 88 (216)
T PF02230_consen 11 GKAKPLVILLHGY-GDSEDLF-ALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAE 88 (216)
T ss_dssp ST-SEEEEEE--T-TS-HHHH-HHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHH
T ss_pred CCCceEEEEECCC-CCCcchh-HHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHH
Confidence 4678999999999 5555433 33333 2233467777776542 1220 000000000 01 1222
Q ss_pred -HHHHHHHHHHH-CCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhH
Q 008093 219 -AREVIGYLHHE-YPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGL 296 (578)
Q Consensus 219 -l~~~i~~l~~~-~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l 296 (578)
+.++++...+. .+..++++.|+|.||++++.++..++. ++.|+|++++.......
T Consensus 89 ~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~--~~~gvv~lsG~~~~~~~--------------------- 145 (216)
T PF02230_consen 89 RLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPE--PLAGVVALSGYLPPESE--------------------- 145 (216)
T ss_dssp HHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSS--TSSEEEEES---TTGCC---------------------
T ss_pred HHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCc--CcCEEEEeecccccccc---------------------
Confidence 33334433322 256689999999999999999999998 89999999754321100
Q ss_pred HHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcc
Q 008093 297 QDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIP 376 (578)
Q Consensus 297 ~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~ 376 (578)
.. ....... ++|++++||.+|+++|.+...
T Consensus 146 ----------------~~--------------------------------~~~~~~~--~~pi~~~hG~~D~vvp~~~~~ 175 (216)
T PF02230_consen 146 ----------------LE--------------------------------DRPEALA--KTPILIIHGDEDPVVPFEWAE 175 (216)
T ss_dssp ----------------CH--------------------------------CCHCCCC--TS-EEEEEETT-SSSTHHHHH
T ss_pred ----------------cc--------------------------------ccccccC--CCcEEEEecCCCCcccHHHHH
Confidence 00 0001111 789999999999999976332
Q ss_pred ---hHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 377 ---WDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 377 ---~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
..+.....++++..++++||-...+ ..+.+.+||++.
T Consensus 176 ~~~~~L~~~~~~v~~~~~~g~gH~i~~~--------~~~~~~~~l~~~ 215 (216)
T PF02230_consen 176 KTAEFLKAAGANVEFHEYPGGGHEISPE--------ELRDLREFLEKH 215 (216)
T ss_dssp HHHHHHHCTT-GEEEEEETT-SSS--HH--------HHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEEcCCCCCCCCHH--------HHHHHHHHHhhh
Confidence 2344555689999999999955333 556788888763
|
; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A. |
| >COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.26 E-value=4.6e-10 Score=111.74 Aligned_cols=207 Identities=16% Similarity=0.099 Sum_probs=138.4
Q ss_pred EEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCC-C
Q 008093 122 RQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRG-L 200 (578)
Q Consensus 122 r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG-~ 200 (578)
...+..+| +.+...+..|.. ....|.||++|++.|-.. +++.+++.+++.||.|+++|+-+ .
T Consensus 4 ~v~~~~~~-~~~~~~~a~P~~--------------~~~~P~VIv~hei~Gl~~--~i~~~a~rlA~~Gy~v~~Pdl~~~~ 66 (236)
T COG0412 4 DVTIPAPD-GELPAYLARPAG--------------AGGFPGVIVLHEIFGLNP--HIRDVARRLAKAGYVVLAPDLYGRQ 66 (236)
T ss_pred ceEeeCCC-ceEeEEEecCCc--------------CCCCCEEEEEecccCCch--HHHHHHHHHHhCCcEEEechhhccC
Confidence 34566667 677767776643 123399999999976444 57999999999999999999877 3
Q ss_pred CCCCCCC--CC---------CCCCCchHHHHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEc
Q 008093 201 GGVSITS--DC---------FYNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAIC 267 (578)
Q Consensus 201 G~S~~~~--~~---------~~~~~~~~Dl~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis 267 (578)
|.+.... +. ........|+.+.++++..+- ...+|.++|+||||.+++.++...++ ++++|+.-
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~~---v~a~v~fy 143 (236)
T COG0412 67 GDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAPE---VKAAVAFY 143 (236)
T ss_pred CCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccCC---ccEEEEec
Confidence 3332211 10 001223479999999998764 35679999999999999999988774 88887552
Q ss_pred CCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCC
Q 008093 268 SPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCS 347 (578)
Q Consensus 268 ~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s 347 (578)
+..-. .
T Consensus 144 g~~~~--------------------------------------------------------------------------~ 149 (236)
T COG0412 144 GGLIA--------------------------------------------------------------------------D 149 (236)
T ss_pred CCCCC--------------------------------------------------------------------------C
Confidence 11100 0
Q ss_pred cccccCCCccceEEEEeCCCCCCCCCCcchH---HHhcCCCEEEEEeCCCCccccccc----cccCc---ccHHHHHHHH
Q 008093 348 SSTYVGNVSIPLLCISSLDDPVCTVEAIPWD---ECRANKNVVLATTWHGGHLAFFEG----LTAAG---MWWVRAVNEY 417 (578)
Q Consensus 348 ~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~---~~~~~~~~~l~~~~~GGH~~~~eg----~~~~~---~w~~~~v~eF 417 (578)
......++++|+|++.|+.|+.+|....... .......+.+.+++++.|--+-+. ..-+. ..-.+.+.+|
T Consensus 150 ~~~~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~f 229 (236)
T COG0412 150 DTADAPKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAF 229 (236)
T ss_pred cccccccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHH
Confidence 0112567899999999999999998744332 223334688999999878544331 01111 1234678888
Q ss_pred HHhhc
Q 008093 418 LGVLH 422 (578)
Q Consensus 418 L~~~~ 422 (578)
+.+..
T Consensus 230 f~~~~ 234 (236)
T COG0412 230 FKRLL 234 (236)
T ss_pred HHHhc
Confidence 87754
|
|
| >TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular | Back alignment and domain information |
|---|
Probab=99.25 E-value=6.4e-11 Score=125.37 Aligned_cols=249 Identities=14% Similarity=0.182 Sum_probs=138.2
Q ss_pred cEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEE
Q 008093 161 PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGT 240 (578)
Q Consensus 161 PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGh 240 (578)
|.||++.-+.| ....+.+.+++.|.. |+.|++.|+.--+..+....++...++++-+.++++++ +. ++.++|+
T Consensus 103 ~pvLiV~Pl~g-~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~~----G~-~v~l~Gv 175 (406)
T TIGR01849 103 PAVLIVAPMSG-HYATLLRSTVEALLP-DHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRFL----GP-DIHVIAV 175 (406)
T ss_pred CcEEEEcCCch-HHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHHh----CC-CCcEEEE
Confidence 66888998854 444456999999999 99999999987776654333332223333333333333 33 4999999
Q ss_pred chHHHHHHHHHhhcCC---CCCccEEEEEcCCcchhhhhHHHhhH--------HHHH---------------HHHH-HHH
Q 008093 241 SIGANILVKYLGEEGE---KTPVAGAAAICSPWDLLIGDRFIGRR--------LIQK---------------IYDR-ALT 293 (578)
Q Consensus 241 SmGG~ial~ya~~~p~---~~~V~~~Vlis~p~d~~~~~~~l~~~--------~~~~---------------~~~~-~l~ 293 (578)
|+||..++.+++...+ ..+++.++++.+|.|.......+... +.+. .|.. .+.
T Consensus 176 CqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~~~~ 255 (406)
T TIGR01849 176 CQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPGFLQL 255 (406)
T ss_pred chhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhcccHHHHHHHhhhccCccccCCCCcccCHHHHH
Confidence 9999998877665422 22699999999999986531111110 0000 0100 000
Q ss_pred HhHH-----HHHhhhcccccccC--CHHHHhccCCHHHHHhhhhhcc--CC--C-CCHHHHHHhCCcc----------cc
Q 008093 294 IGLQ-----DYAQLHEPRYSRLA--NWEGIKKSRSIRDFDSHATCLV--GK--F-ETVDTYYRNCSSS----------TY 351 (578)
Q Consensus 294 ~~l~-----~~~~~~~~~l~~~~--d~~~i~~~~s~~efd~~~~~~~--~g--~-~~~~~yy~~~s~~----------~~ 351 (578)
..++ +....+...+.... +.+. ......|.+.+.... .+ | +.+++.|++.... -.
T Consensus 256 ~~F~~mnp~r~~~~~~~~~~~l~~gd~~~---~~~~~~f~~~y~d~~dlpge~y~~~v~~vf~~n~L~~G~l~v~G~~Vd 332 (406)
T TIGR01849 256 AGFISMNLDRHTKAHSDFFLHLVKGDGQE---ADKHRIFYDEYLAVMDMTAEFYLQTIDVVFQQFLLPQGKFIVEGKRVD 332 (406)
T ss_pred HHHHHcCcchHHHHHHHHHHHHhcCCcch---HHHHHHHHHHhhhccCCcHHHHHHHHHHHHHhCCccCCcEEECCEEec
Confidence 0010 00011111110000 0000 011122222211110 00 1 2444555554422 15
Q ss_pred cCCCc-cceEEEEeCCCCCCCCCCcch--HHHh--cCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHh
Q 008093 352 VGNVS-IPLLCISSLDDPVCTVEAIPW--DECR--ANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 352 l~~I~-vPvLiI~g~dDpivp~~~~~~--~~~~--~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
+++|+ +|+|.+.|++|.|+|+..... .++. ........+.++|||+|.+-|....+ .+...|.+||.+
T Consensus 333 l~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~-~i~P~i~~wl~~ 405 (406)
T TIGR01849 333 PGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFRE-EIYPLVREFIRR 405 (406)
T ss_pred HHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhh-hhchHHHHHHHh
Confidence 67898 999999999999999985433 2221 23455677778999999998743322 345688888864
|
This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some |
| >TIGR03230 lipo_lipase lipoprotein lipase | Back alignment and domain information |
|---|
Probab=99.23 E-value=8.5e-11 Score=125.75 Aligned_cols=111 Identities=19% Similarity=0.207 Sum_probs=83.1
Q ss_pred CCCcEEEEECCCCCCC-ccHHHHHHHHHHHh--CCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC--CC
Q 008093 158 DTTPIAIVIPGLTSDS-AASYIRHLVFNTAK--RGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY--PK 232 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s-~~~yi~~l~~~l~~--~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~--~~ 232 (578)
..+|++|++||+.++. .+.|+..++..+.. ..|+|+++|++|+|.+.......+.....+++.++++++.... +.
T Consensus 39 ~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~l 118 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYPW 118 (442)
T ss_pred CCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCCC
Confidence 5678999999997543 34566667766653 3699999999999987644322222223367888888886543 46
Q ss_pred CcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 233 APLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 233 ~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
.++++|||||||.++..++...+. +|.++++++|..
T Consensus 119 ~~VhLIGHSLGAhIAg~ag~~~p~--rV~rItgLDPAg 154 (442)
T TIGR03230 119 DNVHLLGYSLGAHVAGIAGSLTKH--KVNRITGLDPAG 154 (442)
T ss_pred CcEEEEEECHHHHHHHHHHHhCCc--ceeEEEEEcCCC
Confidence 789999999999999998887777 799999998753
|
Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity. |
| >COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.22 E-value=2.4e-10 Score=111.65 Aligned_cols=241 Identities=17% Similarity=0.160 Sum_probs=147.0
Q ss_pred CCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeC
Q 008093 118 FSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 197 (578)
Q Consensus 118 ~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~ 197 (578)
++--+..++..+|..|......| .. .....|.||-.||++|+..++. .+. .++..||.|+++|-
T Consensus 54 ve~ydvTf~g~~g~rI~gwlvlP-~~------------~~~~~P~vV~fhGY~g~~g~~~--~~l-~wa~~Gyavf~Mdv 117 (321)
T COG3458 54 VEVYDVTFTGYGGARIKGWLVLP-RH------------EKGKLPAVVQFHGYGGRGGEWH--DML-HWAVAGYAVFVMDV 117 (321)
T ss_pred eEEEEEEEeccCCceEEEEEEee-cc------------cCCccceEEEEeeccCCCCCcc--ccc-cccccceeEEEEec
Confidence 44445566777899998544444 31 1357899999999987665422 222 34567999999999
Q ss_pred CCCCCCCCCCCC---------------------CCCCCchHHHHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhhc
Q 008093 198 RGLGGVSITSDC---------------------FYNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEE 254 (578)
Q Consensus 198 RG~G~S~~~~~~---------------------~~~~~~~~Dl~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~ 254 (578)
||.|.+...+.. .|..+...|+..+++.+.... ...+|.+.|.|.||.|++..++-.
T Consensus 118 RGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~ 197 (321)
T COG3458 118 RGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALD 197 (321)
T ss_pred ccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcC
Confidence 999987331110 011122358888888877654 457899999999999999888877
Q ss_pred CCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccC
Q 008093 255 GEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVG 334 (578)
Q Consensus 255 p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~ 334 (578)
+ ++++++++-|-+.-.. +.+.- ....-| ..+..+.+.|.+. ...+ .+++.-|
T Consensus 198 ~---rik~~~~~~Pfl~df~--r~i~~-~~~~~y-----dei~~y~k~h~~~------e~~v--~~TL~yf--------- 249 (321)
T COG3458 198 P---RIKAVVADYPFLSDFP--RAIEL-ATEGPY-----DEIQTYFKRHDPK------EAEV--FETLSYF--------- 249 (321)
T ss_pred h---hhhcccccccccccch--hheee-cccCcH-----HHHHHHHHhcCch------HHHH--HHHHhhh---------
Confidence 6 4888887755432111 00000 000111 1233444444332 0000 1111111
Q ss_pred CCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHH
Q 008093 335 KFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAV 414 (578)
Q Consensus 335 g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v 414 (578)
++.+...+|++|+|+.-|..|++||+...-.........+.+.+++.-+|.+.-. .-.+.+
T Consensus 250 ------------D~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~~K~i~iy~~~aHe~~p~-------~~~~~~ 310 (321)
T COG3458 250 ------------DIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTTSKTIEIYPYFAHEGGPG-------FQSRQQ 310 (321)
T ss_pred ------------hhhhHHHhhccceEEeecccCCCCCChhhHHHhhcccCCceEEEeeccccccCcc-------hhHHHH
Confidence 1345567899999999999999999985432223344556777788777865433 345667
Q ss_pred HHHHHhh
Q 008093 415 NEYLGVL 421 (578)
Q Consensus 415 ~eFL~~~ 421 (578)
..|++.+
T Consensus 311 ~~~l~~l 317 (321)
T COG3458 311 VHFLKIL 317 (321)
T ss_pred HHHHHhh
Confidence 8887764
|
|
| >cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes | Back alignment and domain information |
|---|
Probab=99.21 E-value=4.1e-11 Score=122.12 Aligned_cols=111 Identities=15% Similarity=0.149 Sum_probs=81.2
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHh-CCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH--CCCCc
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAK-RGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHE--YPKAP 234 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~-~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~--~~~~~ 234 (578)
..+|++|++||++++....|...+...+.. .+|+|+++|++|++...............+++.++++++.+. .+..+
T Consensus 34 ~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~g~~~~~ 113 (275)
T cd00707 34 PSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNTGLSLEN 113 (275)
T ss_pred CCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhcCCChHH
Confidence 567899999999876645555666665544 579999999999843221110000112236888889988776 34568
Q ss_pred EEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 235 LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 235 i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
+++|||||||.++..++...++ +|.++++++|..
T Consensus 114 i~lIGhSlGa~vAg~~a~~~~~--~v~~iv~LDPa~ 147 (275)
T cd00707 114 VHLIGHSLGAHVAGFAGKRLNG--KLGRITGLDPAG 147 (275)
T ss_pred EEEEEecHHHHHHHHHHHHhcC--ccceeEEecCCc
Confidence 9999999999999999998887 899999998754
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Probab=99.18 E-value=2e-09 Score=106.77 Aligned_cols=126 Identities=16% Similarity=0.237 Sum_probs=91.4
Q ss_pred EEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCC
Q 008093 125 FRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVS 204 (578)
Q Consensus 125 l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~ 204 (578)
+...+|..+.++-..... .+...+..+||-+||-+|++.+ + +.+...|.+.|+|++.+|+||+|.++
T Consensus 11 ~~~~~~~~~~~~a~y~D~-----------~~~gs~~gTVv~~hGsPGSH~D-F-kYi~~~l~~~~iR~I~iN~PGf~~t~ 77 (297)
T PF06342_consen 11 FQAENGKIVTVQAVYEDS-----------LPSGSPLGTVVAFHGSPGSHND-F-KYIRPPLDEAGIRFIGINYPGFGFTP 77 (297)
T ss_pred cccccCceEEEEEEEEec-----------CCCCCCceeEEEecCCCCCccc-h-hhhhhHHHHcCeEEEEeCCCCCCCCC
Confidence 344578888777554322 2334556689999999987765 3 77888999999999999999999998
Q ss_pred CCCCCCCCCCchHHHHHHHHHHHHHC-CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 205 ITSDCFYNAGWTEDAREVIGYLHHEY-PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 205 ~~~~~~~~~~~~~Dl~~~i~~l~~~~-~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
......|+. .+-...++.+..+. -..+++++|||.|+-.|+..+..+| ..|+++++++-
T Consensus 78 ~~~~~~~~n---~er~~~~~~ll~~l~i~~~~i~~gHSrGcenal~la~~~~----~~g~~lin~~G 137 (297)
T PF06342_consen 78 GYPDQQYTN---EERQNFVNALLDELGIKGKLIFLGHSRGCENALQLAVTHP----LHGLVLINPPG 137 (297)
T ss_pred CCcccccCh---HHHHHHHHHHHHHcCCCCceEEEEeccchHHHHHHHhcCc----cceEEEecCCc
Confidence 765555543 23333333333333 2468999999999999999999883 56999998753
|
|
| >PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=5.4e-10 Score=128.46 Aligned_cols=227 Identities=13% Similarity=0.071 Sum_probs=131.0
Q ss_pred HHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC----------------CCCcEEEEEEchH
Q 008093 180 HLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY----------------PKAPLFAIGTSIG 243 (578)
Q Consensus 180 ~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~----------------~~~~i~lvGhSmG 243 (578)
.+...++.+||.|++.|.||+|+|++.. ..+.....+|..++|+|+..+. .+.++.++|.|+|
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~-~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~ 348 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCP-TTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYL 348 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcC-ccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHH
Confidence 4567889999999999999999998763 2233445689999999998531 2569999999999
Q ss_pred HHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHH--HHHHHHHHhHHHHH-hhhc-c-c-ccccCCHHHHh
Q 008093 244 ANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQK--IYDRALTIGLQDYA-QLHE-P-R-YSRLANWEGIK 317 (578)
Q Consensus 244 G~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~--~~~~~l~~~l~~~~-~~~~-~-~-l~~~~d~~~i~ 317 (578)
|.+++..|+..++ .++++|.+++..+...... ....+.. .+...-...+.... .+.. . . ......++..
T Consensus 349 G~~~~~aAa~~pp--~LkAIVp~a~is~~yd~yr--~~G~~~~~~g~~ged~d~l~~~~~~r~~~~~~~~~~~~~~~~~- 423 (767)
T PRK05371 349 GTLPNAVATTGVE--GLETIIPEAAISSWYDYYR--ENGLVRAPGGYQGEDLDVLAELTYSRNLLAGDYLRHNEACEKL- 423 (767)
T ss_pred HHHHHHHHhhCCC--cceEEEeeCCCCcHHHHhh--cCCceeccCCcCCcchhhHHHHhhhcccCcchhhcchHHHHHH-
Confidence 9999998888777 7999999876654321100 0000000 00000000000000 0000 0 0 0000000000
Q ss_pred ccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCC-cchHH--HhcCCCEEEEEeCCC
Q 008093 318 KSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEA-IPWDE--CRANKNVVLATTWHG 394 (578)
Q Consensus 318 ~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~-~~~~~--~~~~~~~~l~~~~~G 394 (578)
+.++..... ..-....+||+..+....+++|++|+|++||..|..++.+. ..... .....+..+++. .+
T Consensus 424 ----~~~~~~~~~---~~~~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~-~g 495 (767)
T PRK05371 424 ----LAELTAAQD---RKTGDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLH-QG 495 (767)
T ss_pred ----Hhhhhhhhh---hcCCCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEe-CC
Confidence 000100000 00123457888888888899999999999999999998653 23222 222445666554 56
Q ss_pred CccccccccccCcccHHHHHHHHHHhhcC
Q 008093 395 GHLAFFEGLTAAGMWWVRAVNEYLGVLHS 423 (578)
Q Consensus 395 GH~~~~eg~~~~~~w~~~~v~eFL~~~~~ 423 (578)
||..... .....+.+.+.+|++..+.
T Consensus 496 ~H~~~~~---~~~~d~~e~~~~Wfd~~Lk 521 (767)
T PRK05371 496 GHVYPNN---WQSIDFRDTMNAWFTHKLL 521 (767)
T ss_pred CccCCCc---hhHHHHHHHHHHHHHhccc
Confidence 8865332 1122356778889887654
|
|
| >PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic | Back alignment and domain information |
|---|
Probab=99.14 E-value=5.2e-10 Score=105.73 Aligned_cols=157 Identities=18% Similarity=0.212 Sum_probs=97.1
Q ss_pred EEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC--CCCcEEEEEE
Q 008093 163 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY--PKAPLFAIGT 240 (578)
Q Consensus 163 VVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~--~~~~i~lvGh 240 (578)
|+++||++|+....|...+.+.+... ++|-..|+ .. -|+.+.++.+.+.. .+.+.++|||
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~--------~~---------P~~~~W~~~l~~~i~~~~~~~ilVaH 62 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDW--------DN---------PDLDEWVQALDQAIDAIDEPTILVAH 62 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC----------TS-----------HHHHHHHHHHCCHC-TTTEEEEEE
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEecccc--------CC---------CCHHHHHHHHHHHHhhcCCCeEEEEe
Confidence 68999999888888878888888776 77777665 11 23555666665543 2457999999
Q ss_pred chHHHHHHHHHh-hcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhcc
Q 008093 241 SIGANILVKYLG-EEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKS 319 (578)
Q Consensus 241 SmGG~ial~ya~-~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~ 319 (578)
|+|+..+++|++ +... +|.|+++++++...... . ..+.
T Consensus 63 SLGc~~~l~~l~~~~~~--~v~g~lLVAp~~~~~~~-~-------------------------~~~~------------- 101 (171)
T PF06821_consen 63 SLGCLTALRWLAEQSQK--KVAGALLVAPFDPDDPE-P-------------------------FPPE------------- 101 (171)
T ss_dssp THHHHHHHHHHHHTCCS--SEEEEEEES--SCGCHH-C-------------------------CTCG-------------
T ss_pred CHHHHHHHHHHhhcccc--cccEEEEEcCCCccccc-c-------------------------hhhh-------------
Confidence 999999999995 4444 89999999876321000 0 0000
Q ss_pred CCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCcccc
Q 008093 320 RSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAF 399 (578)
Q Consensus 320 ~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~ 399 (578)
...|.. .....+.+|.++|.++|||++|.+......... +..++.++++||+.-
T Consensus 102 -------------~~~f~~-----------~p~~~l~~~~~viaS~nDp~vp~~~a~~~A~~l--~a~~~~~~~~GHf~~ 155 (171)
T PF06821_consen 102 -------------LDGFTP-----------LPRDPLPFPSIVIASDNDPYVPFERAQRLAQRL--GAELIILGGGGHFNA 155 (171)
T ss_dssp -------------GCCCTT-----------SHCCHHHCCEEEEEETTBSSS-HHHHHHHHHHH--T-EEEEETS-TTSSG
T ss_pred -------------cccccc-----------CcccccCCCeEEEEcCCCCccCHHHHHHHHHHc--CCCeEECCCCCCccc
Confidence 011110 112234567799999999999987554333333 578899999999987
Q ss_pred ccccc
Q 008093 400 FEGLT 404 (578)
Q Consensus 400 ~eg~~ 404 (578)
-+|..
T Consensus 156 ~~G~~ 160 (171)
T PF06821_consen 156 ASGFG 160 (171)
T ss_dssp GGTHS
T ss_pred ccCCC
Confidence 77643
|
The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A. |
| >COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.5e-09 Score=109.79 Aligned_cols=114 Identities=19% Similarity=0.173 Sum_probs=79.0
Q ss_pred CCCcEEEEECCCCCCCcc-H--------HHHHHHH---HHHhCCceEEEEeCCCCC-CCCCCCC---C--CCCCC----c
Q 008093 158 DTTPIAIVIPGLTSDSAA-S--------YIRHLVF---NTAKRGWNVVVSNHRGLG-GVSITSD---C--FYNAG----W 215 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~-~--------yi~~l~~---~l~~~Gy~Vvv~D~RG~G-~S~~~~~---~--~~~~~----~ 215 (578)
.....|++|||++|+++. . |+..++- .+.-..|-|++.|..|.+ +|..+.. . .|... -
T Consensus 49 ~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~t 128 (368)
T COG2021 49 EKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVIT 128 (368)
T ss_pred cCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCccc
Confidence 345679999999986542 1 3344332 223345999999999944 5543321 1 12211 2
Q ss_pred hHHHHHHHHHHHHHCCCCcEE-EEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchh
Q 008093 216 TEDAREVIGYLHHEYPKAPLF-AIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL 273 (578)
Q Consensus 216 ~~Dl~~~i~~l~~~~~~~~i~-lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~ 273 (578)
.+|...+-..+.+..+-+++. +||-||||+.++.++..+|+ .|..+|.|+++....
T Consensus 129 i~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd--~V~~~i~ia~~~r~s 185 (368)
T COG2021 129 IRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPD--RVRRAIPIATAARLS 185 (368)
T ss_pred HHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChH--HHhhhheecccccCC
Confidence 356666667777788877877 99999999999999999999 899999998866544
|
|
| >COG2936 Predicted acyl esterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.2e-09 Score=118.65 Aligned_cols=139 Identities=17% Similarity=0.120 Sum_probs=107.9
Q ss_pred CCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEEC--CCC---CCCccHHHHHHHH---HHHhCC
Q 008093 118 FSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIP--GLT---SDSAASYIRHLVF---NTAKRG 189 (578)
Q Consensus 118 ~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllH--Gl~---G~s~~~yi~~l~~---~l~~~G 189 (578)
..++.+.++|.||.+|+.|.+.|.+ ....|+++..+ =.. |.... ...... .++.+|
T Consensus 17 ~~~~~v~V~MRDGvrL~~dIy~Pa~--------------~g~~Pvll~~~~~Py~k~~~~~~~--~~~~~p~~~~~aa~G 80 (563)
T COG2936 17 YIERDVMVPMRDGVRLAADIYRPAG--------------AGPLPVLLSRTRLPYRKRNGTFGP--QLSALPQPAWFAAQG 80 (563)
T ss_pred eeeeeeeEEecCCeEEEEEEEccCC--------------CCCCceeEEeeccccccccccCcc--hhhcccccceeecCc
Confidence 3456788999999999999999854 25678888887 110 01111 122333 577899
Q ss_pred ceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH-CCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcC
Q 008093 190 WNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHE-YPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICS 268 (578)
Q Consensus 190 y~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~-~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~ 268 (578)
|.||..|.||.|.|++.-...+. ...+|-.++|+++.++ ..+.++..+|.|++|...+..|+..|. .+++++..++
T Consensus 81 YavV~qDvRG~~~SeG~~~~~~~-~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pP--aLkai~p~~~ 157 (563)
T COG2936 81 YAVVNQDVRGRGGSEGVFDPESS-REAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPP--ALKAIAPTEG 157 (563)
T ss_pred eEEEEecccccccCCcccceecc-ccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCc--hheeeccccc
Confidence 99999999999999988665555 5678999999999875 357799999999999999999999887 7999999988
Q ss_pred Ccchhhh
Q 008093 269 PWDLLIG 275 (578)
Q Consensus 269 p~d~~~~ 275 (578)
.+|....
T Consensus 158 ~~D~y~d 164 (563)
T COG2936 158 LVDRYRD 164 (563)
T ss_pred ccccccc
Confidence 8886554
|
|
| >PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.5e-09 Score=104.78 Aligned_cols=249 Identities=16% Similarity=0.170 Sum_probs=127.3
Q ss_pred eEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCC
Q 008093 121 RRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGL 200 (578)
Q Consensus 121 ~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~ 200 (578)
-.+.+.+.||.+|++ |...|..+ .....++||+.+|+ |.....| ..++++|+..||+|+.+|.--|
T Consensus 3 idhvi~~~~~~~I~v-wet~P~~~-----------~~~~~~tiliA~Gf-~rrmdh~-agLA~YL~~NGFhViRyDsl~H 68 (294)
T PF02273_consen 3 IDHVIRLEDGRQIRV-WETRPKNN-----------EPKRNNTILIAPGF-ARRMDHF-AGLAEYLSANGFHVIRYDSLNH 68 (294)
T ss_dssp EEEEEEETTTEEEEE-EEE---TT-----------S---S-EEEEE-TT--GGGGGG-HHHHHHHHTTT--EEEE---B-
T ss_pred ccceeEcCCCCEEEE-eccCCCCC-----------CcccCCeEEEecch-hHHHHHH-HHHHHHHhhCCeEEEecccccc
Confidence 356788999999997 54443321 12456899999999 5566677 7899999999999999999876
Q ss_pred -CCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHH
Q 008093 201 -GGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFI 279 (578)
Q Consensus 201 -G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l 279 (578)
|.|++.-..+....-..|+..+++|++ +.+..++.++.-|+.|-+|...+++- .+.-+|..-+..++....
T Consensus 69 vGlSsG~I~eftms~g~~sL~~V~dwl~-~~g~~~~GLIAaSLSaRIAy~Va~~i----~lsfLitaVGVVnlr~TL--- 140 (294)
T PF02273_consen 69 VGLSSGDINEFTMSIGKASLLTVIDWLA-TRGIRRIGLIAASLSARIAYEVAADI----NLSFLITAVGVVNLRDTL--- 140 (294)
T ss_dssp ------------HHHHHHHHHHHHHHHH-HTT---EEEEEETTHHHHHHHHTTTS------SEEEEES--S-HHHHH---
T ss_pred ccCCCCChhhcchHHhHHHHHHHHHHHH-hcCCCcchhhhhhhhHHHHHHHhhcc----CcceEEEEeeeeeHHHHH---
Confidence 777766444333334579999999999 55667899999999999999999864 255566555555543221
Q ss_pred hhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccce
Q 008093 280 GRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPL 359 (578)
Q Consensus 280 ~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPv 359 (578)
.+.+.. .|+......++...+.+... -.-.-|-.. +...++.++. +....++.+.+|+
T Consensus 141 -----e~al~~-------Dyl~~~i~~lp~dldfeGh~--l~~~vFv~d--c~e~~w~~l~------ST~~~~k~l~iP~ 198 (294)
T PF02273_consen 141 -----EKALGY-------DYLQLPIEQLPEDLDFEGHN--LGAEVFVTD--CFEHGWDDLD------STINDMKRLSIPF 198 (294)
T ss_dssp -----HHHHSS--------GGGS-GGG--SEEEETTEE--EEHHHHHHH--HHHTT-SSHH------HHHHHHTT--S-E
T ss_pred -----HHHhcc-------chhhcchhhCCCcccccccc--cchHHHHHH--HHHcCCccch------hHHHHHhhCCCCE
Confidence 111110 12222222222211111000 000011111 1124455443 2346788899999
Q ss_pred EEEEeCCCCCCCCCCcchHH-HhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhc
Q 008093 360 LCISSLDDPVCTVEAIPWDE-CRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 360 LiI~g~dDpivp~~~~~~~~-~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~ 422 (578)
+.++|.+|..|....+.... ....+...+...++.+|-- -| -...+..|.+++.
T Consensus 199 iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL-~e--------nl~vlrnfy~svt 253 (294)
T PF02273_consen 199 IAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHDL-GE--------NLVVLRNFYQSVT 253 (294)
T ss_dssp EEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-T-TS--------SHHHHHHHHHHHH
T ss_pred EEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCccchh-hh--------ChHHHHHHHHHHH
Confidence 99999999999876554322 2356778899999999932 11 2345666777664
|
Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B. |
| >COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.02 E-value=9.7e-09 Score=92.90 Aligned_cols=165 Identities=15% Similarity=0.171 Sum_probs=116.8
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCC--CCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEE
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGV--SITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFA 237 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S--~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~l 237 (578)
.-+||+-||-+++..+..|...+..++.+||.|+.|+++-...- ....+..-...........+..++......|+++
T Consensus 14 ~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~gpLi~ 93 (213)
T COG3571 14 PVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAEGPLII 93 (213)
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccCCceee
Confidence 34788899998888888999999999999999999997543221 1111111111112334444555666655669999
Q ss_pred EEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHh
Q 008093 238 IGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIK 317 (578)
Q Consensus 238 vGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~ 317 (578)
-|+||||-++...+.+... +|+++++++-|+..... + +
T Consensus 94 GGkSmGGR~aSmvade~~A--~i~~L~clgYPfhppGK-----------------------------P--------e--- 131 (213)
T COG3571 94 GGKSMGGRVASMVADELQA--PIDGLVCLGYPFHPPGK-----------------------------P--------E--- 131 (213)
T ss_pred ccccccchHHHHHHHhhcC--CcceEEEecCccCCCCC-----------------------------c--------c---
Confidence 9999999999999888776 69999998766533110 0 0
Q ss_pred ccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCc
Q 008093 318 KSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGH 396 (578)
Q Consensus 318 ~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH 396 (578)
. -....+..+++|+||.+|..|++-..+.+. ....++.++++.++++.|
T Consensus 132 ---~-------------------------~Rt~HL~gl~tPtli~qGtrD~fGtr~~Va--~y~ls~~iev~wl~~adH 180 (213)
T COG3571 132 ---Q-------------------------LRTEHLTGLKTPTLITQGTRDEFGTRDEVA--GYALSDPIEVVWLEDADH 180 (213)
T ss_pred ---c-------------------------chhhhccCCCCCeEEeecccccccCHHHHH--hhhcCCceEEEEeccCcc
Confidence 0 011356778999999999999998766443 345678899999999999
|
|
| >PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.8e-09 Score=105.16 Aligned_cols=102 Identities=21% Similarity=0.174 Sum_probs=71.0
Q ss_pred EEEECCCC--CCCccHHHHHHHHHHHh-CCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH-----CCCCc
Q 008093 163 AIVIPGLT--SDSAASYIRHLVFNTAK-RGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHE-----YPKAP 234 (578)
Q Consensus 163 VVllHGl~--G~s~~~yi~~l~~~l~~-~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~-----~~~~~ 234 (578)
||++||-+ .++.+.. ..++..+++ .|+.|+++|||=.... ......+|+.++++++.+. ++..+
T Consensus 1 v~~~HGGg~~~g~~~~~-~~~~~~la~~~g~~v~~~~Yrl~p~~-------~~p~~~~D~~~a~~~l~~~~~~~~~d~~~ 72 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESH-WPFAARLAAERGFVVVSIDYRLAPEA-------PFPAALEDVKAAYRWLLKNADKLGIDPER 72 (211)
T ss_dssp EEEE--STTTSCGTTTH-HHHHHHHHHHHTSEEEEEE---TTTS-------STTHHHHHHHHHHHHHHHTHHHHTEEEEE
T ss_pred CEEECCcccccCChHHH-HHHHHHHHhhccEEEEEeeccccccc-------cccccccccccceeeeccccccccccccc
Confidence 68999832 2223333 455666664 8999999999954322 1224569999999999887 56779
Q ss_pred EEEEEEchHHHHHHHHHhhcCCC--CCccEEEEEcCCcch
Q 008093 235 LFAIGTSIGANILVKYLGEEGEK--TPVAGAAAICSPWDL 272 (578)
Q Consensus 235 i~lvGhSmGG~ial~ya~~~p~~--~~V~~~Vlis~p~d~ 272 (578)
++++|+|.||.+++.++....+. ..+++++++++..|+
T Consensus 73 i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 73 IVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred eEEeecccccchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 99999999999999888654332 258999999997766
|
; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A .... |
| >PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=98.96 E-value=2.4e-08 Score=99.37 Aligned_cols=103 Identities=19% Similarity=0.260 Sum_probs=79.3
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC-------
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY------- 230 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~------- 230 (578)
.+=|+|||+||+. ...++| ..+.+++++.||-||++|+...+... .....+++.++++|+.+..
T Consensus 15 g~yPVv~f~~G~~-~~~s~Y-s~ll~hvAShGyIVV~~d~~~~~~~~-------~~~~~~~~~~vi~Wl~~~L~~~l~~~ 85 (259)
T PF12740_consen 15 GTYPVVLFLHGFL-LINSWY-SQLLEHVASHGYIVVAPDLYSIGGPD-------DTDEVASAAEVIDWLAKGLESKLPLG 85 (259)
T ss_pred CCcCEEEEeCCcC-CCHHHH-HHHHHHHHhCceEEEEecccccCCCC-------cchhHHHHHHHHHHHHhcchhhcccc
Confidence 4569999999995 667778 88999999999999999977644421 1234578888888876532
Q ss_pred ---CCCcEEEEEEchHHHHHHHHHhhcCC---CCCccEEEEEcCC
Q 008093 231 ---PKAPLFAIGTSIGANILVKYLGEEGE---KTPVAGAAAICSP 269 (578)
Q Consensus 231 ---~~~~i~lvGhSmGG~ial~ya~~~p~---~~~V~~~Vlis~p 269 (578)
+-.++.+.|||-||-++...+..+.+ ..+++++++++|.
T Consensus 86 v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPV 130 (259)
T PF12740_consen 86 VKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPV 130 (259)
T ss_pred ccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccc
Confidence 13489999999999999988877632 2379999999754
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >COG0657 Aes Esterase/lipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.8e-08 Score=104.57 Aligned_cols=130 Identities=16% Similarity=0.077 Sum_probs=90.0
Q ss_pred EecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCC--CCCccHHHHHHHHHHHhCCceEEEEeCCCCCCC
Q 008093 126 RLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLT--SDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGV 203 (578)
Q Consensus 126 ~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~--G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S 203 (578)
...++..+.++++.|.. ......|+||++||-+ .++....-..+...+...|+.|+++|||-...-
T Consensus 57 ~~~~~~~~~~~~y~p~~------------~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~ 124 (312)
T COG0657 57 AGPSGDGVPVRVYRPDR------------KAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEH 124 (312)
T ss_pred cCCCCCceeEEEECCCC------------CCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCC
Confidence 45566668899998711 1135689999999932 222222223455556678999999999965432
Q ss_pred CCCCCCCCCCCchHHHHHHHHHHHHHC-----CCCcEEEEEEchHHHHHHHHHhhcCC--CCCccEEEEEcCCcchhh
Q 008093 204 SITSDCFYNAGWTEDAREVIGYLHHEY-----PKAPLFAIGTSIGANILVKYLGEEGE--KTPVAGAAAICSPWDLLI 274 (578)
Q Consensus 204 ~~~~~~~~~~~~~~Dl~~~i~~l~~~~-----~~~~i~lvGhSmGG~ial~ya~~~p~--~~~V~~~Vlis~p~d~~~ 274 (578)
+ .....+|+.+++.++.+.. ...+|+++|+|.||++++.++....+ .....+.+++++..|...
T Consensus 125 ~-------~p~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 125 P-------FPAALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS 195 (312)
T ss_pred C-------CCchHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc
Confidence 2 1245688999999998663 35689999999999999988765443 235778888888777653
|
|
| >TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family | Back alignment and domain information |
|---|
Probab=98.95 E-value=4.1e-09 Score=119.51 Aligned_cols=94 Identities=17% Similarity=0.156 Sum_probs=70.8
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCC---------CCC--CC-C--------CC---c
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSIT---------SDC--FY-N--------AG---W 215 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~---------~~~--~~-~--------~~---~ 215 (578)
..|+||++||+++ ....| ..++..|.++||+|+++|+||||.+... ... .| + .+ .
T Consensus 448 g~P~VVllHG~~g-~~~~~-~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~ 525 (792)
T TIGR03502 448 GWPVVIYQHGITG-AKENA-LAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQS 525 (792)
T ss_pred CCcEEEEeCCCCC-CHHHH-HHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHH
Confidence 4579999999966 44455 6889999999999999999999998443 110 01 1 01 2
Q ss_pred hHHHHHHHHHHH------HH------CCCCcEEEEEEchHHHHHHHHHhhc
Q 008093 216 TEDAREVIGYLH------HE------YPKAPLFAIGTSIGANILVKYLGEE 254 (578)
Q Consensus 216 ~~Dl~~~i~~l~------~~------~~~~~i~lvGhSmGG~ial~ya~~~ 254 (578)
..|+..+...++ .. ++..+++++||||||.++..++...
T Consensus 526 v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 526 ILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred HHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhc
Confidence 368888878777 32 5677999999999999999998763
|
Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae |
| >PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length | Back alignment and domain information |
|---|
Probab=98.95 E-value=2.5e-09 Score=87.68 Aligned_cols=46 Identities=24% Similarity=0.501 Sum_probs=40.8
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCC
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSIT 206 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~ 206 (578)
.+.+|+++||+ +.+...| ..++..|+++||.|+++|+||||.|+..
T Consensus 15 ~k~~v~i~HG~-~eh~~ry-~~~a~~L~~~G~~V~~~D~rGhG~S~g~ 60 (79)
T PF12146_consen 15 PKAVVVIVHGF-GEHSGRY-AHLAEFLAEQGYAVFAYDHRGHGRSEGK 60 (79)
T ss_pred CCEEEEEeCCc-HHHHHHH-HHHHHHHHhCCCEEEEECCCcCCCCCCc
Confidence 58899999999 5566677 8999999999999999999999999853
|
Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. |
| >KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=98.95 E-value=4.1e-07 Score=90.33 Aligned_cols=271 Identities=13% Similarity=0.146 Sum_probs=158.4
Q ss_pred eeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHH-----HHHHHhCCceEEE
Q 008093 120 YRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHL-----VFNTAKRGWNVVV 194 (578)
Q Consensus 120 y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l-----~~~l~~~Gy~Vvv 194 (578)
.+.+.+.+.- |.++...+..++ +.+|++|-.|.++-++.+.| ..+ +..+.++ |.++-
T Consensus 22 ~~e~~V~T~~-G~v~V~V~Gd~~---------------~~kpaiiTyhDlglN~~scF-q~ff~~p~m~ei~~~-fcv~H 83 (326)
T KOG2931|consen 22 CQEHDVETAH-GVVHVTVYGDPK---------------GNKPAIITYHDLGLNHKSCF-QGFFNFPDMAEILEH-FCVYH 83 (326)
T ss_pred ceeeeecccc-ccEEEEEecCCC---------------CCCceEEEecccccchHhHh-HHhhcCHhHHHHHhh-eEEEe
Confidence 4566676666 456665554322 36888999999865555544 322 2334454 99999
Q ss_pred EeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhh
Q 008093 195 SNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLI 274 (578)
Q Consensus 195 ~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~ 274 (578)
+|.+||-.-...-+..|.+--.+|+.+.+-.+.+.+.-..++.+|.-.||+|..++|..+|+ +|-|+|+|++-.....
T Consensus 84 V~~PGqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~--rV~GLvLIn~~~~a~g 161 (326)
T KOG2931|consen 84 VDAPGQEDGAPSFPEGYPYPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPE--RVLGLVLINCDPCAKG 161 (326)
T ss_pred cCCCccccCCccCCCCCCCCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChh--heeEEEEEecCCCCch
Confidence 99999854433334444444457777777766666666789999999999999999999999 9999999987554443
Q ss_pred hhHHHhhHHH-HHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCccccc-
Q 008093 275 GDRFIGRRLI-QKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYV- 352 (578)
Q Consensus 275 ~~~~l~~~~~-~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l- 352 (578)
...+...++. +.++..-++.....++-.|.-.-..... +..-+.++...+... .+-.++..|.........|
T Consensus 162 wiew~~~K~~s~~l~~~Gmt~~~~d~ll~H~Fg~e~~~~-----~~diVq~Yr~~l~~~-~N~~Nl~~fl~ayn~R~DL~ 235 (326)
T KOG2931|consen 162 WIEWAYNKVSSNLLYYYGMTQGVKDYLLAHHFGKEELGN-----NSDIVQEYRQHLGER-LNPKNLALFLNAYNGRRDLS 235 (326)
T ss_pred HHHHHHHHHHHHHHHhhchhhhHHHHHHHHHhccccccc-----cHHHHHHHHHHHHhc-CChhHHHHHHHHhcCCCCcc
Confidence 3333333322 2233334455555554433211000000 011112222222111 1223334444333222211
Q ss_pred -------CCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 353 -------GNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 353 -------~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
..++||+|++-|+.-|.+..- +.........+..++.+.++|-+...+. |.+ +.+.+.=|+.-.
T Consensus 236 ~~r~~~~~tlkc~vllvvGd~Sp~~~~v-v~~n~~Ldp~~ttllk~~d~g~l~~e~q--P~k--l~ea~~~FlqG~ 306 (326)
T KOG2931|consen 236 IERPKLGTTLKCPVLLVVGDNSPHVSAV-VECNSKLDPTYTTLLKMADCGGLVQEEQ--PGK--LAEAFKYFLQGM 306 (326)
T ss_pred ccCCCcCccccccEEEEecCCCchhhhh-hhhhcccCcccceEEEEcccCCcccccC--chH--HHHHHHHHHccC
Confidence 255799999999998887543 1111122345678888888887766652 544 778888888765
|
|
| >COG0400 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.89 E-value=4.2e-08 Score=95.18 Aligned_cols=176 Identities=21% Similarity=0.173 Sum_probs=106.6
Q ss_pred CCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCC-------CCCCCCC-C---chHHHHHHHH
Q 008093 156 KDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSIT-------SDCFYNA-G---WTEDAREVIG 224 (578)
Q Consensus 156 ~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~-------~~~~~~~-~---~~~Dl~~~i~ 224 (578)
.++..|+||++||++| ....++. +...... .+.+ +..||-=.-... ....+.. + .++.+.+.++
T Consensus 14 ~~p~~~~iilLHG~Gg-de~~~~~-~~~~~~P-~~~~--is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~ 88 (207)
T COG0400 14 GDPAAPLLILLHGLGG-DELDLVP-LPELILP-NATL--VSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLE 88 (207)
T ss_pred CCCCCcEEEEEecCCC-Chhhhhh-hhhhcCC-CCeE--EcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHH
Confidence 3567889999999954 4434433 3333332 2333 344442111000 0111110 0 1234455555
Q ss_pred HHHHHCC--CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhh
Q 008093 225 YLHHEYP--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQL 302 (578)
Q Consensus 225 ~l~~~~~--~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~ 302 (578)
.+..+++ ..+++++|+|-||++++.....++. .++++++.++..-...
T Consensus 89 ~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~--~~~~ail~~g~~~~~~---------------------------- 138 (207)
T COG0400 89 ELAEEYGIDSSRIILIGFSQGANIALSLGLTLPG--LFAGAILFSGMLPLEP---------------------------- 138 (207)
T ss_pred HHHHHhCCChhheEEEecChHHHHHHHHHHhCch--hhccchhcCCcCCCCC----------------------------
Confidence 5556664 4789999999999999999999988 7888887754321100
Q ss_pred hcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcc---hHH
Q 008093 303 HEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIP---WDE 379 (578)
Q Consensus 303 ~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~---~~~ 379 (578)
...-..-.+|+|+++|..||+||....+ ..+
T Consensus 139 ----------------------------------------------~~~~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l 172 (207)
T COG0400 139 ----------------------------------------------ELLPDLAGTPILLSHGTEDPVVPLALAEALAEYL 172 (207)
T ss_pred ----------------------------------------------ccccccCCCeEEEeccCcCCccCHHHHHHHHHHH
Confidence 0000112589999999999999987433 335
Q ss_pred HhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 380 CRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 380 ~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
....-++....++ +||-.-.| ..+.+.+|+...
T Consensus 173 ~~~g~~v~~~~~~-~GH~i~~e--------~~~~~~~wl~~~ 205 (207)
T COG0400 173 TASGADVEVRWHE-GGHEIPPE--------ELEAARSWLANT 205 (207)
T ss_pred HHcCCCEEEEEec-CCCcCCHH--------HHHHHHHHHHhc
Confidence 5667788888888 99955333 456677787653
|
|
| >PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics [] | Back alignment and domain information |
|---|
Probab=98.85 E-value=6.2e-08 Score=95.40 Aligned_cols=102 Identities=22% Similarity=0.153 Sum_probs=74.5
Q ss_pred EEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEc
Q 008093 162 IAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTS 241 (578)
Q Consensus 162 iVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhS 241 (578)
+|+++||.+| +...| ..+++.+...++.|+.++++|.+..... .....+=+...++.|+...+..|+.++|||
T Consensus 2 ~lf~~p~~gG-~~~~y-~~la~~l~~~~~~v~~i~~~~~~~~~~~-----~~si~~la~~y~~~I~~~~~~gp~~L~G~S 74 (229)
T PF00975_consen 2 PLFCFPPAGG-SASSY-RPLARALPDDVIGVYGIEYPGRGDDEPP-----PDSIEELASRYAEAIRARQPEGPYVLAGWS 74 (229)
T ss_dssp EEEEESSTTC-SGGGG-HHHHHHHTTTEEEEEEECSTTSCTTSHE-----ESSHHHHHHHHHHHHHHHTSSSSEEEEEET
T ss_pred eEEEEcCCcc-CHHHH-HHHHHhCCCCeEEEEEEecCCCCCCCCC-----CCCHHHHHHHHHHHhhhhCCCCCeeehccC
Confidence 5899999965 66667 7899888765689999999999832111 111222234567778887788899999999
Q ss_pred hHHHHHHHHHhhcCCC-CCccEEEEEcCCc
Q 008093 242 IGANILVKYLGEEGEK-TPVAGAAAICSPW 270 (578)
Q Consensus 242 mGG~ial~ya~~~p~~-~~V~~~Vlis~p~ 270 (578)
+||.+|..+|.+..+. ..+..+++++++.
T Consensus 75 ~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~ 104 (229)
T PF00975_consen 75 FGGILAFEMARQLEEAGEEVSRLILIDSPP 104 (229)
T ss_dssp HHHHHHHHHHHHHHHTT-SESEEEEESCSS
T ss_pred ccHHHHHHHHHHHHHhhhccCceEEecCCC
Confidence 9999999888654221 2688999999654
|
Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A .... |
| >PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.4e-07 Score=96.91 Aligned_cols=107 Identities=20% Similarity=0.196 Sum_probs=80.5
Q ss_pred CCCcEEEEECCCCCCCccHHHHHH-HHHHHhCCceEEEEeCCCCCCCCCCCCCCC---C--------CCchHHHHHHHHH
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHL-VFNTAKRGWNVVVSNHRGLGGVSITSDCFY---N--------AGWTEDAREVIGY 225 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l-~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~---~--------~~~~~Dl~~~i~~ 225 (578)
+.+|++|.++|. |+...+.-+.+ +..|.+.|+..+++..+=||.-......-. + .+...+...++.|
T Consensus 90 ~~rp~~IhLagT-GDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~W 168 (348)
T PF09752_consen 90 PYRPVCIHLAGT-GDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHW 168 (348)
T ss_pred CCCceEEEecCC-CccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHH
Confidence 468999999998 67666555566 888999999999999999987543321100 0 1123577888899
Q ss_pred HHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcC
Q 008093 226 LHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICS 268 (578)
Q Consensus 226 l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~ 268 (578)
+..+ +..++.+.|.||||.+|...++..|. ++..+-++++
T Consensus 169 l~~~-G~~~~g~~G~SmGG~~A~laa~~~p~--pv~~vp~ls~ 208 (348)
T PF09752_consen 169 LERE-GYGPLGLTGISMGGHMAALAASNWPR--PVALVPCLSW 208 (348)
T ss_pred HHhc-CCCceEEEEechhHhhHHhhhhcCCC--ceeEEEeecc
Confidence 9888 77799999999999999999998888 6665555543
|
|
| >KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.83 E-value=2.3e-08 Score=95.61 Aligned_cols=159 Identities=19% Similarity=0.193 Sum_probs=107.7
Q ss_pred cEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeC-CCCCCCCCCCC--------CCCCCCchHHHHHHHHHHHHHCC
Q 008093 161 PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH-RGLGGVSITSD--------CFYNAGWTEDAREVIGYLHHEYP 231 (578)
Q Consensus 161 PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~-RG~G~S~~~~~--------~~~~~~~~~Dl~~~i~~l~~~~~ 231 (578)
..||++--+.|-+... ++..+..++..||.|+++|+ ||=..++.... +........|+..++++++.+.+
T Consensus 40 ~~li~i~DvfG~~~~n-~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~ 118 (242)
T KOG3043|consen 40 KVLIVIQDVFGFQFPN-TREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGD 118 (242)
T ss_pred eEEEEEEeeeccccHH-HHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCC
Confidence 4566665554545443 48899999999999999996 45222222111 11111223799999999998888
Q ss_pred CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccC
Q 008093 232 KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLA 311 (578)
Q Consensus 232 ~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~ 311 (578)
..+|.++|+.|||-++..+....++ +.++|+.-+.+
T Consensus 119 ~kkIGv~GfCwGak~vv~~~~~~~~---f~a~v~~hps~----------------------------------------- 154 (242)
T KOG3043|consen 119 SKKIGVVGFCWGAKVVVTLSAKDPE---FDAGVSFHPSF----------------------------------------- 154 (242)
T ss_pred cceeeEEEEeecceEEEEeeccchh---heeeeEecCCc-----------------------------------------
Confidence 8899999999999999888777764 66666442110
Q ss_pred CHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHH--HhcCCC--EE
Q 008093 312 NWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDE--CRANKN--VV 387 (578)
Q Consensus 312 d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~--~~~~~~--~~ 387 (578)
. ....+.++++|+|++.|+.|+++|++.+...+ ...++. ..
T Consensus 155 -------------------------~----------d~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~ 199 (242)
T KOG3043|consen 155 -------------------------V----------DSADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQ 199 (242)
T ss_pred -------------------------C----------ChhHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCccccee
Confidence 0 12345678899999999999999998554322 233333 35
Q ss_pred EEEeCCCCccccc
Q 008093 388 LATTWHGGHLAFF 400 (578)
Q Consensus 388 l~~~~~GGH~~~~ 400 (578)
+.++++-|| ||.
T Consensus 200 v~~f~g~~H-Gf~ 211 (242)
T KOG3043|consen 200 VKTFSGVGH-GFV 211 (242)
T ss_pred EEEcCCccc-hhh
Confidence 888888888 555
|
|
| >PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function | Back alignment and domain information |
|---|
Probab=98.83 E-value=9.1e-08 Score=97.07 Aligned_cols=107 Identities=20% Similarity=0.324 Sum_probs=79.1
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhC---CceEEEEeCCCCCCCCCCC-----CCCCCCCchHHHHHHHHHHHH---
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKR---GWNVVVSNHRGLGGVSITS-----DCFYNAGWTEDAREVIGYLHH--- 228 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~---Gy~Vvv~D~RG~G~S~~~~-----~~~~~~~~~~Dl~~~i~~l~~--- 228 (578)
++.+++++|..| --+.| ..+...|.++ .|.|++..+.||-.++... .+.| +..+.+...++.+++
T Consensus 2 ~~li~~IPGNPG-lv~fY-~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~--sL~~QI~hk~~~i~~~~~ 77 (266)
T PF10230_consen 2 RPLIVFIPGNPG-LVEFY-EEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLF--SLQDQIEHKIDFIKELIP 77 (266)
T ss_pred cEEEEEECCCCC-hHHHH-HHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCcc--CHHHHHHHHHHHHHHHhh
Confidence 468999999976 55556 7788877754 7999999999998766541 1222 333445544444443
Q ss_pred HC--CCCcEEEEEEchHHHHHHHHHhhcC-CCCCccEEEEEcCCc
Q 008093 229 EY--PKAPLFAIGTSIGANILVKYLGEEG-EKTPVAGAAAICSPW 270 (578)
Q Consensus 229 ~~--~~~~i~lvGhSmGG~ial~ya~~~p-~~~~V~~~Vlis~p~ 270 (578)
.+ +..+++++|||+|++++++.+.+.+ ...+|.+++++.|..
T Consensus 78 ~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 78 QKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTI 122 (266)
T ss_pred hhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcc
Confidence 33 5778999999999999999999998 334799999999865
|
|
| >COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.81 E-value=3.9e-08 Score=95.87 Aligned_cols=209 Identities=13% Similarity=0.079 Sum_probs=111.5
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH----CCCC
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHE----YPKA 233 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~----~~~~ 233 (578)
..++.++++|=- |++.+.| +.+...+.. -+.++++.++|+|.--.. ....|+..+++.+... +.++
T Consensus 5 ~~~~~L~cfP~A-GGsa~~f-r~W~~~lp~-~iel~avqlPGR~~r~~e-------p~~~di~~Lad~la~el~~~~~d~ 74 (244)
T COG3208 5 GARLRLFCFPHA-GGSASLF-RSWSRRLPA-DIELLAVQLPGRGDRFGE-------PLLTDIESLADELANELLPPLLDA 74 (244)
T ss_pred CCCceEEEecCC-CCCHHHH-HHHHhhCCc-hhheeeecCCCcccccCC-------cccccHHHHHHHHHHHhccccCCC
Confidence 355678888865 5566666 777776643 589999999999864222 1234555555555433 4577
Q ss_pred cEEEEEEchHHHHHHHHHhhcCCC-CCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCC
Q 008093 234 PLFAIGTSIGANILVKYLGEEGEK-TPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLAN 312 (578)
Q Consensus 234 ~i~lvGhSmGG~ial~ya~~~p~~-~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d 312 (578)
|..++||||||+++...|...... ....++.+.+...........+... -+..+...++.+-...
T Consensus 75 P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~-----~D~~~l~~l~~lgG~p--------- 140 (244)
T COG3208 75 PFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHL-----DDADFLADLVDLGGTP--------- 140 (244)
T ss_pred CeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCC-----CHHHHHHHHHHhCCCC---------
Confidence 999999999999999888664321 1344554444321111111111000 0111111111111000
Q ss_pred HHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcc--cccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEE
Q 008093 313 WEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSS--TYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLAT 390 (578)
Q Consensus 313 ~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~--~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~ 390 (578)
..+.....+.+ .+.. .+..-|+..... ..-..+.+|+.++.|++|+.+..+.+..+.........+.+
T Consensus 141 -~e~led~El~~---l~LP------ilRAD~~~~e~Y~~~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~ 210 (244)
T COG3208 141 -PELLEDPELMA---LFLP------ILRADFRALESYRYPPPAPLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRV 210 (244)
T ss_pred -hHHhcCHHHHH---HHHH------HHHHHHHHhcccccCCCCCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEE
Confidence 00001111111 1100 011111111111 11256899999999999999998866533444556778888
Q ss_pred eCCCCcccccc
Q 008093 391 TWHGGHLAFFE 401 (578)
Q Consensus 391 ~~~GGH~~~~e 401 (578)
++ |||+-..+
T Consensus 211 fd-GgHFfl~~ 220 (244)
T COG3208 211 FD-GGHFFLNQ 220 (244)
T ss_pred ec-Ccceehhh
Confidence 77 68976554
|
|
| >COG4188 Predicted dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.80 E-value=3.9e-08 Score=101.37 Aligned_cols=97 Identities=20% Similarity=0.273 Sum_probs=73.1
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCC--CCCCCCCCCCC--CC----CCchHHHHHHHHHHHHH
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRG--LGGVSITSDCF--YN----AGWTEDAREVIGYLHHE 229 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG--~G~S~~~~~~~--~~----~~~~~Dl~~~i~~l~~~ 229 (578)
...|+|++-||. |+....| ..+++.+++.||-|.++|++| .|+.+...... +. .....|+..+++++.+.
T Consensus 69 ~~~PlvvlshG~-Gs~~~~f-~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~ 146 (365)
T COG4188 69 YLLPLVVLSHGS-GSYVTGF-AWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQL 146 (365)
T ss_pred CcCCeEEecCCC-CCCccch-hhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHh
Confidence 467999999999 4555556 789999999999999999999 45544322110 11 13347999999998876
Q ss_pred --CC-------CCcEEEEEEchHHHHHHHHHhhcCC
Q 008093 230 --YP-------KAPLFAIGTSIGANILVKYLGEEGE 256 (578)
Q Consensus 230 --~~-------~~~i~lvGhSmGG~ial~ya~~~p~ 256 (578)
.| ..+|.++|||+||..++..++.+.+
T Consensus 147 ~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 147 TASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred hcCcccccccCccceEEEecccccHHHHHhcccccc
Confidence 12 3589999999999999988877654
|
|
| >PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO | Back alignment and domain information |
|---|
Probab=98.78 E-value=2e-07 Score=89.21 Aligned_cols=90 Identities=17% Similarity=0.135 Sum_probs=60.2
Q ss_pred EEEECCCCCCCccHHHHHHHHHHHhCCc--eEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEE
Q 008093 163 AIVIPGLTSDSAASYIRHLVFNTAKRGW--NVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGT 240 (578)
Q Consensus 163 VVllHGl~G~s~~~yi~~l~~~l~~~Gy--~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGh 240 (578)
++.+||+.++..+.-.+.+.+.+.+.|. .+.++|++- ..+++.+.++.+.+......+.+||.
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~---------------~p~~a~~~l~~~i~~~~~~~~~liGS 66 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLPP---------------FPEEAIAQLEQLIEELKPENVVLIGS 66 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCCc---------------CHHHHHHHHHHHHHhCCCCCeEEEEE
Confidence 7899999776666444566667777653 444444431 12344455555555555556999999
Q ss_pred chHHHHHHHHHhhcCCCCCccEEEEEcCCcch
Q 008093 241 SIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (578)
Q Consensus 241 SmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~ 272 (578)
||||..|..++.+++- .+ |+|+|....
T Consensus 67 SlGG~~A~~La~~~~~----~a-vLiNPav~p 93 (187)
T PF05728_consen 67 SLGGFYATYLAERYGL----PA-VLINPAVRP 93 (187)
T ss_pred ChHHHHHHHHHHHhCC----CE-EEEcCCCCH
Confidence 9999999988877754 33 889887654
|
One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised. |
| >KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.75 E-value=3.5e-07 Score=105.20 Aligned_cols=240 Identities=16% Similarity=0.115 Sum_probs=149.3
Q ss_pred CCCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCc--cHHHHHHHH-HHHhCCceEE
Q 008093 117 CFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSA--ASYIRHLVF-NTAKRGWNVV 193 (578)
Q Consensus 117 ~~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~--~~yi~~l~~-~l~~~Gy~Vv 193 (578)
...+++..+ ||.+..+-...|+..+ ....-|+++.+||-.++-. +.+.-.+.. .+...|+.|+
T Consensus 497 ~~~~~~i~~---~~~~~~~~~~lP~~~~-----------~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~ 562 (755)
T KOG2100|consen 497 IVEFGKIEI---DGITANAILILPPNFD-----------PSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVL 562 (755)
T ss_pred cceeEEEEe---ccEEEEEEEecCCCCC-----------CCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEE
Confidence 344444433 8877766666665422 2345689999999765211 111112222 4567899999
Q ss_pred EEeCCCCCCCCCCCC----CCCCCCchHHHHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEc
Q 008093 194 VSNHRGLGGVSITSD----CFYNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAIC 267 (578)
Q Consensus 194 v~D~RG~G~S~~~~~----~~~~~~~~~Dl~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis 267 (578)
.+|.||-|+....-. +.......+|...+++.+.+.. +..++.++|+|.||.++++.++..++. -++++++++
T Consensus 563 ~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~-~fkcgvava 641 (755)
T KOG2100|consen 563 QVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGD-VFKCGVAVA 641 (755)
T ss_pred EEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCc-eEEEEEEec
Confidence 999999886543211 1112235678888888887654 456899999999999999999998741 577779998
Q ss_pred CCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCC-HHHHHHhC
Q 008093 268 SPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFET-VDTYYRNC 346 (578)
Q Consensus 268 ~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~-~~~yy~~~ 346 (578)
|..|..-. +....+ ...|... -..-|.+.
T Consensus 642 PVtd~~~y-------------ds~~te-------------------------------------rymg~p~~~~~~y~e~ 671 (755)
T KOG2100|consen 642 PVTDWLYY-------------DSTYTE-------------------------------------RYMGLPSENDKGYEES 671 (755)
T ss_pred ceeeeeee-------------cccccH-------------------------------------hhcCCCccccchhhhc
Confidence 87665311 100000 0001110 01115556
Q ss_pred CcccccCCCccce-EEEEeCCCCCCCCCCcch---HHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhc
Q 008093 347 SSSTYVGNVSIPL-LCISSLDDPVCTVEAIPW---DECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 347 s~~~~l~~I~vPv-LiI~g~dDpivp~~~~~~---~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~ 422 (578)
+....+.+++.|. |++||..|.-|+.+.... .+....-...+.++++-.|-...- ....-+...+..|+....
T Consensus 672 ~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~---~~~~~~~~~~~~~~~~~~ 748 (755)
T KOG2100|consen 672 SVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYV---EVISHLYEKLDRFLRDCF 748 (755)
T ss_pred cccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccc---cchHHHHHHHHHHHHHHc
Confidence 6667777887777 999999999998773221 233344448999999999955443 112346778888988654
Q ss_pred CC
Q 008093 423 SS 424 (578)
Q Consensus 423 ~~ 424 (578)
..
T Consensus 749 ~~ 750 (755)
T KOG2100|consen 749 GS 750 (755)
T ss_pred Cc
Confidence 43
|
|
| >PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A | Back alignment and domain information |
|---|
Probab=98.75 E-value=1.3e-08 Score=105.42 Aligned_cols=133 Identities=17% Similarity=0.181 Sum_probs=76.2
Q ss_pred eeEEE--EEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHH-----------------HHH
Q 008093 120 YRRQL--FRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASY-----------------IRH 180 (578)
Q Consensus 120 y~r~~--l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~y-----------------i~~ 180 (578)
|+++. |.+.++..+....+.|... +.+.|.||++||-+++ .+.. -..
T Consensus 86 Y~~EKv~f~~~p~~~vpaylLvPd~~-------------~~p~PAVL~lHgHg~~-Ke~~~g~~gv~~~~~~~~~~~~~~ 151 (390)
T PF12715_consen 86 YTREKVEFNTTPGSRVPAYLLVPDGA-------------KGPFPAVLCLHGHGGG-KEKMAGEDGVSPDLKDDYDDPKQD 151 (390)
T ss_dssp EEEEEEEE--STTB-EEEEEEEETT---------------S-EEEEEEE--TT---HHHHCT---SSGCG--STTSTTT-
T ss_pred eEEEEEEEEccCCeeEEEEEEecCCC-------------CCCCCEEEEeCCCCCC-cccccCCcccccccchhhcccccc
Confidence 44443 4445677777666665331 3567899999997443 2211 123
Q ss_pred HHHHHHhCCceEEEEeCCCCCCCCCCCCCC--CC------------CCc------hHHHHHHHHHHHHHC--CCCcEEEE
Q 008093 181 LVFNTAKRGWNVVVSNHRGLGGVSITSDCF--YN------------AGW------TEDAREVIGYLHHEY--PKAPLFAI 238 (578)
Q Consensus 181 l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~--~~------------~~~------~~Dl~~~i~~l~~~~--~~~~i~lv 238 (578)
++..|+++||-|+++|.+|+|......... .+ .|+ ..|...+++++..+- ...+|.++
T Consensus 152 ~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~ 231 (390)
T PF12715_consen 152 YGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCM 231 (390)
T ss_dssp HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEE
T ss_pred HHHHHHhCCCEEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEE
Confidence 578899999999999999999754322111 00 111 135555888887653 35689999
Q ss_pred EEchHHHHHHHHHhhcCCCCCccEEEEEcCC
Q 008093 239 GTSIGANILVKYLGEEGEKTPVAGAAAICSP 269 (578)
Q Consensus 239 GhSmGG~ial~ya~~~p~~~~V~~~Vlis~p 269 (578)
|+||||..++.+++-.+ +|+++|..+-.
T Consensus 232 GfSmGg~~a~~LaALDd---RIka~v~~~~l 259 (390)
T PF12715_consen 232 GFSMGGYRAWWLAALDD---RIKATVANGYL 259 (390)
T ss_dssp EEGGGHHHHHHHHHH-T---T--EEEEES-B
T ss_pred eecccHHHHHHHHHcch---hhHhHhhhhhh
Confidence 99999999998877765 58888876543
|
|
| >KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=98.74 E-value=8.9e-07 Score=92.01 Aligned_cols=252 Identities=14% Similarity=0.106 Sum_probs=138.0
Q ss_pred EEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCC---CCC-ccHHHHHHHHHH-HhCCceEEEEeCCC
Q 008093 125 FRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLT---SDS-AASYIRHLVFNT-AKRGWNVVVSNHRG 199 (578)
Q Consensus 125 l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~---G~s-~~~yi~~l~~~l-~~~Gy~Vvv~D~RG 199 (578)
++....+.+..+.|.|.... .....|+||++||.+ |+. ...| ..+...+ .+.+..|+.+|||=
T Consensus 66 v~~~~~~~l~vRly~P~~~~-----------~~~~~p~lvyfHGGGf~~~S~~~~~y-~~~~~~~a~~~~~vvvSVdYRL 133 (336)
T KOG1515|consen 66 VTIDPFTNLPVRLYRPTSSS-----------SETKLPVLVYFHGGGFCLGSANSPAY-DSFCTRLAAELNCVVVSVDYRL 133 (336)
T ss_pred eEecCCCCeEEEEEcCCCCC-----------cccCceEEEEEeCCccEeCCCCCchh-HHHHHHHHHHcCeEEEecCccc
Confidence 34445555777777764421 115789999999943 221 2244 6666666 45689999999995
Q ss_pred CCCCCCCCCCCCCCCchHHHHHHHHHHHHH------CCCCcEEEEEEchHHHHHHHHHhhcC----CCCCccEEEEEcCC
Q 008093 200 LGGVSITSDCFYNAGWTEDAREVIGYLHHE------YPKAPLFAIGTSIGANILVKYLGEEG----EKTPVAGAAAICSP 269 (578)
Q Consensus 200 ~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~------~~~~~i~lvGhSmGG~ial~ya~~~p----~~~~V~~~Vlis~p 269 (578)
--..+.+ ...+|..+++.|+.+. .+..+++++|-|.||+||..++.+.. ....++|.|++-|.
T Consensus 134 APEh~~P-------a~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~ 206 (336)
T KOG1515|consen 134 APEHPFP-------AAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPF 206 (336)
T ss_pred CCCCCCC-------ccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecc
Confidence 5443322 2347777777777664 24567999999999999998876543 23479999999887
Q ss_pred cchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcc
Q 008093 270 WDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSS 349 (578)
Q Consensus 270 ~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~ 349 (578)
+........-.+..... ...........+.....+.- . ...+..+.-+... +..
T Consensus 207 ~~~~~~~~~e~~~~~~~-~~~~~~~~~~~~w~~~lP~~---~-----------~~~~~p~~np~~~-----------~~~ 260 (336)
T KOG1515|consen 207 FQGTDRTESEKQQNLNG-SPELARPKIDKWWRLLLPNG---K-----------TDLDHPFINPVGN-----------SLA 260 (336)
T ss_pred cCCCCCCCHHHHHhhcC-CcchhHHHHHHHHHHhCCCC---C-----------CCcCCcccccccc-----------ccc
Confidence 65433211100000000 00000000000000000000 0 0001000000000 011
Q ss_pred cccCCCcc-ceEEEEeCCCCCCCCC-CcchHHHhcCCCEEEEEeCCCCccccccccc-cCcccHHHHHHHHHHhh
Q 008093 350 TYVGNVSI-PLLCISSLDDPVCTVE-AIPWDECRANKNVVLATTWHGGHLAFFEGLT-AAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 350 ~~l~~I~v-PvLiI~g~dDpivp~~-~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~-~~~~w~~~~v~eFL~~~ 421 (578)
....-..+ |+|++.++.|.+.... .+...+.+..-.+++..+++|+|..++-... .....+.+.+.+|++..
T Consensus 261 ~d~~~~~lp~tlv~~ag~D~L~D~~~~Y~~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 261 KDLSGLGLPPTLVVVAGYDVLRDEGLAYAEKLKKAGVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred cCccccCCCceEEEEeCchhhhhhhHHHHHHHHHcCCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 12223344 5999999999998665 2333455566667788899999988775321 12234667788887753
|
|
| >PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases | Back alignment and domain information |
|---|
Probab=98.73 E-value=4.6e-07 Score=93.07 Aligned_cols=231 Identities=19% Similarity=0.125 Sum_probs=118.8
Q ss_pred HHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCc--hHHHHHHHHHHHHHC------CCCcEEEEEEchHHHHHHHH
Q 008093 179 RHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGW--TEDAREVIGYLHHEY------PKAPLFAIGTSIGANILVKY 250 (578)
Q Consensus 179 ~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~--~~Dl~~~i~~l~~~~------~~~~i~lvGhSmGG~ial~y 250 (578)
..++..+.++||.|++.||.|.|. + |..+. ..++.+.++..++.. .+.+++++|||-||.-++..
T Consensus 16 ~~~l~~~L~~GyaVv~pDY~Glg~-~------y~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~A 88 (290)
T PF03583_consen 16 APFLAAWLARGYAVVAPDYEGLGT-P------YLNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWA 88 (290)
T ss_pred HHHHHHHHHCCCEEEecCCCCCCC-c------ccCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHH
Confidence 456677788999999999999987 2 22221 134444444444322 24689999999999887654
Q ss_pred Hh---hcCCCCC--ccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHH---HHh--ccC
Q 008093 251 LG---EEGEKTP--VAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWE---GIK--KSR 320 (578)
Q Consensus 251 a~---~~p~~~~--V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~---~i~--~~~ 320 (578)
+. ++..+.. +.|+++.++|.|+......+.......++...+. ++..........+....... .+. ...
T Consensus 89 A~l~~~YApeL~~~l~Gaa~gg~~~dl~~~~~~~~~~~~~g~~~~~l~-gl~~~yP~l~~~~~~~l~~~g~~~~~~~~~~ 167 (290)
T PF03583_consen 89 AELAPSYAPELNRDLVGAAAGGPPADLAALLRALNGGPFAGLVPYALL-GLAAAYPELDELLDSYLTPEGRALLDDARTR 167 (290)
T ss_pred HHHhHHhCcccccceeEEeccCCccCHHHHHhccCCCccHhHHHHHHH-HHHHhCccHHHHHHHHhhHHHHHHHHHHHhh
Confidence 42 3333345 8899999888887654333222111111111111 11110000000000000000 000 000
Q ss_pred CHHHHH-hhhhhcc-----CCCC---------CHHHHHHhCCc-ccccCCCccceEEEEeCCCCCCCCCCcc---hHHHh
Q 008093 321 SIRDFD-SHATCLV-----GKFE---------TVDTYYRNCSS-STYVGNVSIPLLCISSLDDPVCTVEAIP---WDECR 381 (578)
Q Consensus 321 s~~efd-~~~~~~~-----~g~~---------~~~~yy~~~s~-~~~l~~I~vPvLiI~g~dDpivp~~~~~---~~~~~ 381 (578)
...+.. ....... .-+. .+...+.+.+. ...-..-++|+++.+|.+|.++|..... ...|+
T Consensus 168 c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~ 247 (290)
T PF03583_consen 168 CLADIVAEYAFQDLFTGDTRYFKPGADLLADPAFRRALAENSLGMGGDWTPTVPVLIYQGTADEVVPPADTDALVAKWCA 247 (290)
T ss_pred hHHHHHHHhhhccccccchhccCChhhhhhhHHHHHHHHHhhccccCCCCCCCCEEEEecCCCCCCChHHHHHHHHHHHH
Confidence 011000 0000000 0011 12233333322 0011233799999999999999987433 34677
Q ss_pred cC-CCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcCC
Q 008093 382 AN-KNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSS 424 (578)
Q Consensus 382 ~~-~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~~ 424 (578)
.. .++++..++.++|..-.-. ......+||...++.
T Consensus 248 ~G~a~V~~~~~~~~~H~~~~~~-------~~~~a~~Wl~~rf~G 284 (290)
T PF03583_consen 248 AGGADVEYVRYPGGGHLGAAFA-------SAPDALAWLDDRFAG 284 (290)
T ss_pred cCCCCEEEEecCCCChhhhhhc-------CcHHHHHHHHHHHCC
Confidence 78 6999999999999875431 124566777776544
|
Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process |
| >COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.71 E-value=6.9e-08 Score=100.50 Aligned_cols=109 Identities=19% Similarity=0.224 Sum_probs=83.7
Q ss_pred CcEEEEECCCCCCCccHHH------HHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCch-HHHHHHHHHHHHHCCC
Q 008093 160 TPIAIVIPGLTSDSAASYI------RHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWT-EDAREVIGYLHHEYPK 232 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi------~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~-~Dl~~~i~~l~~~~~~ 232 (578)
++.++++|-+.. ..|| +.++..+.++|..|+++++++=..+.. .+. ..... +++.+.++.+++..+.
T Consensus 107 ~~PlLiVpP~iN---k~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~--~~~-~edYi~e~l~~aid~v~~itg~ 180 (445)
T COG3243 107 KRPLLIVPPWIN---KFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLA--AKN-LEDYILEGLSEAIDTVKDITGQ 180 (445)
T ss_pred CCceEeeccccC---ceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhh--hcc-HHHHHHHHHHHHHHHHHHHhCc
Confidence 344778887642 2233 578899999999999999987554432 111 12233 7888899999998888
Q ss_pred CcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhh
Q 008093 233 APLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIG 275 (578)
Q Consensus 233 ~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~ 275 (578)
.+|.++|++.||+++..+++..+.. +|+.++++.+++|+...
T Consensus 181 ~~InliGyCvGGtl~~~ala~~~~k-~I~S~T~lts~~DF~~~ 222 (445)
T COG3243 181 KDINLIGYCVGGTLLAAALALMAAK-RIKSLTLLTSPVDFSHA 222 (445)
T ss_pred cccceeeEecchHHHHHHHHhhhhc-ccccceeeecchhhccc
Confidence 8999999999999999999888874 59999999999987653
|
|
| >PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=98.70 E-value=1e-07 Score=95.48 Aligned_cols=113 Identities=22% Similarity=0.395 Sum_probs=71.5
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHH-hCCc--e--EEEEeCCCC----CCCCCC--CCC---CCC-------CCchH
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTA-KRGW--N--VVVSNHRGL----GGVSIT--SDC---FYN-------AGWTE 217 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~-~~Gy--~--Vvv~D~RG~----G~S~~~--~~~---~~~-------~~~~~ 217 (578)
..| .||+||+.|+..+ + ..++..+. +.|. . ++-++--|+ |.-... .|- .|. ...+.
T Consensus 11 ~tP-TifihG~~gt~~s-~-~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~ 87 (255)
T PF06028_consen 11 TTP-TIFIHGYGGTANS-F-NHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAK 87 (255)
T ss_dssp -EE-EEEE--TTGGCCC-C-HHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHH
T ss_pred CCc-EEEECCCCCChhH-H-HHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHH
Confidence 445 6699999765544 4 78899987 6664 2 333444442 221111 110 011 12345
Q ss_pred HHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCC---CccEEEEEcCCcchhh
Q 008093 218 DAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKT---PVAGAAAICSPWDLLI 274 (578)
Q Consensus 218 Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~---~V~~~Vlis~p~d~~~ 274 (578)
-+..++.+++++|.-.++.+|||||||..++.|+..++.+. .+..+|.|++|++...
T Consensus 88 wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~ 147 (255)
T PF06028_consen 88 WLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGIL 147 (255)
T ss_dssp HHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTT
T ss_pred HHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccc
Confidence 78889999999999999999999999999999998876532 5899999999998754
|
; PDB: 3LP5_A 3FLE_A 3DS8_A. |
| >PF10503 Esterase_phd: Esterase PHB depolymerase | Back alignment and domain information |
|---|
Probab=98.69 E-value=5.9e-07 Score=88.10 Aligned_cols=108 Identities=16% Similarity=0.195 Sum_probs=72.8
Q ss_pred CCcEEEEECCCCCCCccHHHH--HHHHHHHhCCceEEEEeCCCCCCCCC-----CCCCCCCCCchHHHHHHHHHHHHHCC
Q 008093 159 TTPIAIVIPGLTSDSAASYIR--HLVFNTAKRGWNVVVSNHRGLGGVSI-----TSDCFYNAGWTEDAREVIGYLHHEYP 231 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~--~l~~~l~~~Gy~Vvv~D~RG~G~S~~-----~~~~~~~~~~~~Dl~~~i~~l~~~~~ 231 (578)
..|+||++||.++ +.+.+.. .+.....++||-|+.++...-..... ........+....+.++++++..+++
T Consensus 15 ~~PLVv~LHG~~~-~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~ 93 (220)
T PF10503_consen 15 PVPLVVVLHGCGQ-SAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYN 93 (220)
T ss_pred CCCEEEEeCCCCC-CHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhcc
Confidence 5799999999955 4444432 12334445799999888532111100 00011112345567888999988884
Q ss_pred --CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCC
Q 008093 232 --KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSP 269 (578)
Q Consensus 232 --~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p 269 (578)
..+|++.|+|.||+++..++..+|+ .++++..++..
T Consensus 94 iD~~RVyv~G~S~Gg~ma~~la~~~pd--~faa~a~~sG~ 131 (220)
T PF10503_consen 94 IDPSRVYVTGLSNGGMMANVLACAYPD--LFAAVAVVSGV 131 (220)
T ss_pred cCCCceeeEEECHHHHHHHHHHHhCCc--cceEEEeeccc
Confidence 5689999999999999999999999 78887776653
|
|
| >PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3 | Back alignment and domain information |
|---|
Probab=98.69 E-value=4.2e-07 Score=91.33 Aligned_cols=249 Identities=14% Similarity=0.169 Sum_probs=119.7
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHH----HHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCC
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLV----FNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKA 233 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~----~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~ 233 (578)
..+|++|-.|-++-++.+.| ..+. .....+.|.++=+|.+|+..-...-+..|.+--.+++.+.+..+.+.++-.
T Consensus 21 ~~kp~ilT~HDvGlNh~scF-~~ff~~~~m~~i~~~f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f~lk 99 (283)
T PF03096_consen 21 GNKPAILTYHDVGLNHKSCF-QGFFNFEDMQEILQNFCIYHIDAPGQEEGAATLPEGYQYPSMDQLAEMLPEVLDHFGLK 99 (283)
T ss_dssp TTS-EEEEE--TT--HHHHC-HHHHCSHHHHHHHTTSEEEEEE-TTTSTT-----TT-----HHHHHCTHHHHHHHHT--
T ss_pred CCCceEEEeccccccchHHH-HHHhcchhHHHHhhceEEEEEeCCCCCCCcccccccccccCHHHHHHHHHHHHHhCCcc
Confidence 36899999998843333323 2221 112235799999999998765444444444444455555555555555556
Q ss_pred cEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHH-HHHHHHHHHhHHHHHhhhcccccccCC
Q 008093 234 PLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQ-KIYDRALTIGLQDYAQLHEPRYSRLAN 312 (578)
Q Consensus 234 ~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~-~~~~~~l~~~l~~~~~~~~~~l~~~~d 312 (578)
.++.+|--.||+|..+||..+|+ +|.|+|+|++.........+...++.. .++..-++..+..++..|. +.
T Consensus 100 ~vIg~GvGAGAnIL~rfAl~~p~--~V~GLiLvn~~~~~~gw~Ew~~~K~~~~~L~~~gmt~~~~d~Ll~h~------Fg 171 (283)
T PF03096_consen 100 SVIGFGVGAGANILARFALKHPE--RVLGLILVNPTCTAAGWMEWFYQKLSSWLLYSYGMTSSVKDYLLWHY------FG 171 (283)
T ss_dssp -EEEEEETHHHHHHHHHHHHSGG--GEEEEEEES---S---HHHHHHHHHH-------CTTS-HHHHHHHHH------S-
T ss_pred EEEEEeeccchhhhhhccccCcc--ceeEEEEEecCCCCccHHHHHHHHHhcccccccccccchHHhhhhcc------cc
Confidence 79999999999999999999999 999999998765443333332222211 1111112222333322221 00
Q ss_pred HHHHhc-cCCHHHHHhhhhhccCCCCC----HHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEE
Q 008093 313 WEGIKK-SRSIRDFDSHATCLVGKFET----VDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVV 387 (578)
Q Consensus 313 ~~~i~~-~~s~~efd~~~~~~~~g~~~----~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~ 387 (578)
.+.... ...+..+...+.... .-.+ ++.|.++.+....++...||+|++.|+..|....- +.........+..
T Consensus 172 ~~~~~~n~Dlv~~yr~~l~~~~-Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~~~~v-v~~ns~Ldp~~tt 249 (283)
T PF03096_consen 172 KEEEENNSDLVQTYRQHLDERI-NPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSPHVDDV-VEMNSKLDPTKTT 249 (283)
T ss_dssp HHHHHCT-HHHHHHHHHHHT-T-THHHHHHHHHHHHT-----SECTTCCS-EEEEEETTSTTHHHH-HHHHHHS-CCCEE
T ss_pred cccccccHHHHHHHHHHHhcCC-CHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCcchhhH-HHHHhhcCcccce
Confidence 010000 001112222211111 0012 23333333444456677899999999998876432 2222223445688
Q ss_pred EEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 388 LATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 388 l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
++.++++|=+...|. |.+ +.+.+.=|++-+
T Consensus 250 llkv~dcGglV~eEq--P~k--laea~~lFlQG~ 279 (283)
T PF03096_consen 250 LLKVADCGGLVLEEQ--PGK--LAEAFKLFLQGM 279 (283)
T ss_dssp EEEETT-TT-HHHH---HHH--HHHHHHHHHHHT
T ss_pred EEEecccCCcccccC--cHH--HHHHHHHHHccC
Confidence 999999987777773 444 777777777654
|
Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A. |
| >PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=98.68 E-value=3.2e-07 Score=90.70 Aligned_cols=109 Identities=15% Similarity=0.129 Sum_probs=74.0
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHh--------CCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC-
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAK--------RGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY- 230 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~--------~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~- 230 (578)
+..|||+||..|+... + +.++..+.+ ..++++.+|+...... .. ... -....+-+.+.++++.+.+
T Consensus 4 g~pVlFIhG~~Gs~~q-~-rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~-~~-g~~-l~~q~~~~~~~i~~i~~~~~ 78 (225)
T PF07819_consen 4 GIPVLFIHGNAGSYKQ-V-RSLASELQRKALLNDNSSHFDFFTVDFNEELSA-FH-GRT-LQRQAEFLAEAIKYILELYK 78 (225)
T ss_pred CCEEEEECcCCCCHhH-H-HHHHHHHhhhhhhccCccceeEEEeccCccccc-cc-ccc-HHHHHHHHHHHHHHHHHhhh
Confidence 4569999999775443 3 566655522 2588999998764211 11 111 1123456777788887776
Q ss_pred ----CCCcEEEEEEchHHHHHHHHHhhcCC-CCCccEEEEEcCCcchh
Q 008093 231 ----PKAPLFAIGTSIGANILVKYLGEEGE-KTPVAGAAAICSPWDLL 273 (578)
Q Consensus 231 ----~~~~i~lvGhSmGG~ial~ya~~~p~-~~~V~~~Vlis~p~d~~ 273 (578)
+..++++|||||||.++-.++..... ...|+.+|.+++|....
T Consensus 79 ~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~ 126 (225)
T PF07819_consen 79 SNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGS 126 (225)
T ss_pred hccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCc
Confidence 67899999999999998887765442 22699999999997554
|
This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane |
| >COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.4e-06 Score=80.79 Aligned_cols=176 Identities=15% Similarity=0.187 Sum_probs=99.0
Q ss_pred cEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEE
Q 008093 161 PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGT 240 (578)
Q Consensus 161 PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGh 240 (578)
+.+|++||+.|+....|....-..+.. +-.+++. ....+ ....|++-+. +.+... ..++++|+|
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l~~----a~rveq~-----~w~~P--~~~dWi~~l~---~~v~a~--~~~~vlVAH 66 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESALPN----ARRVEQD-----DWEAP--VLDDWIARLE---KEVNAA--EGPVVLVAH 66 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhCcc----chhcccC-----CCCCC--CHHHHHHHHH---HHHhcc--CCCeEEEEe
Confidence 358999999888777774433333221 1111111 00101 0112222222 233222 346999999
Q ss_pred chHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccC
Q 008093 241 SIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSR 320 (578)
Q Consensus 241 SmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~ 320 (578)
|+|+.++++|+.+... +|.|+.++++|.--... . . ..
T Consensus 67 SLGc~~v~h~~~~~~~--~V~GalLVAppd~~~~~---~-~-------------------------------------~~ 103 (181)
T COG3545 67 SLGCATVAHWAEHIQR--QVAGALLVAPPDVSRPE---I-R-------------------------------------PK 103 (181)
T ss_pred cccHHHHHHHHHhhhh--ccceEEEecCCCccccc---c-c-------------------------------------hh
Confidence 9999999999998877 89999999876421100 0 0 00
Q ss_pred CHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccc
Q 008093 321 SIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFF 400 (578)
Q Consensus 321 s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~ 400 (578)
....|+ .....+..-|.+++.+++||+++.+......... ...++.+.+|||+---
T Consensus 104 ~~~tf~----------------------~~p~~~lpfps~vvaSrnDp~~~~~~a~~~a~~w--gs~lv~~g~~GHiN~~ 159 (181)
T COG3545 104 HLMTFD----------------------PIPREPLPFPSVVVASRNDPYVSYEHAEDLANAW--GSALVDVGEGGHINAE 159 (181)
T ss_pred hccccC----------------------CCccccCCCceeEEEecCCCCCCHHHHHHHHHhc--cHhheecccccccchh
Confidence 000000 0123344579999999999999988554432222 3467888899998755
Q ss_pred cccccCcccHHHHHHHHHHh
Q 008093 401 EGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 401 eg~~~~~~w~~~~v~eFL~~ 420 (578)
.|..+-+ .....+.+|+.+
T Consensus 160 sG~g~wp-eg~~~l~~~~s~ 178 (181)
T COG3545 160 SGFGPWP-EGYALLAQLLSR 178 (181)
T ss_pred hcCCCcH-HHHHHHHHHhhh
Confidence 5532211 133455555544
|
|
| >KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.60 E-value=1e-06 Score=95.08 Aligned_cols=239 Identities=17% Similarity=0.118 Sum_probs=142.9
Q ss_pred CCCCCCeeE-EEE--EecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCC-------CccHHHHHHHH
Q 008093 114 RPPCFSYRR-QLF--RLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSD-------SAASYIRHLVF 183 (578)
Q Consensus 114 ~~~~~~y~r-~~l--~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~-------s~~~yi~~l~~ 183 (578)
..+.+.|.- ++| ..+.|.++..-.+.|... ....+-|+|+++-|-.+- ..-.|+| ..
T Consensus 604 ~~~~Pdy~p~eif~fqs~tg~~lYgmiyKPhn~-----------~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR--~~ 670 (867)
T KOG2281|consen 604 APPPPDYVPPEIFSFQSKTGLTLYGMIYKPHNF-----------QPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLR--FC 670 (867)
T ss_pred CCCCCccCChhheeeecCCCcEEEEEEEccccC-----------CCCCCCceEEEEcCCCceEEeeccccceehhh--hh
Confidence 344455544 444 665566665555555332 113457899999985431 1123333 24
Q ss_pred HHHhCCceEEEEeCCCCCCCCCCCCCC--C--CCCchHHHHHHHHHHHHHCC---CCcEEEEEEchHHHHHHHHHhhcCC
Q 008093 184 NTAKRGWNVVVSNHRGLGGVSITSDCF--Y--NAGWTEDAREVIGYLHHEYP---KAPLFAIGTSIGANILVKYLGEEGE 256 (578)
Q Consensus 184 ~l~~~Gy~Vvv~D~RG~G~S~~~~~~~--~--~~~~~~Dl~~~i~~l~~~~~---~~~i~lvGhSmGG~ial~ya~~~p~ 256 (578)
.|+..||.|+++|.||...-...-... . ..-..+|-.+-++++..+++ -.++.+.|+|+||++++..+.++|+
T Consensus 671 ~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~ 750 (867)
T KOG2281|consen 671 RLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPN 750 (867)
T ss_pred hhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcc
Confidence 577899999999999955432221110 1 11234788888999988874 5689999999999999999999998
Q ss_pred CCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCC
Q 008093 257 KTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKF 336 (578)
Q Consensus 257 ~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~ 336 (578)
-++.+|+=+ |.... ..|+. .+|.+.-|+
T Consensus 751 --IfrvAIAGa-pVT~W------------~~YDT-------------------------------------gYTERYMg~ 778 (867)
T KOG2281|consen 751 --IFRVAIAGA-PVTDW------------RLYDT-------------------------------------GYTERYMGY 778 (867)
T ss_pred --eeeEEeccC-cceee------------eeecc-------------------------------------cchhhhcCC
Confidence 555555433 32110 01111 111111222
Q ss_pred C-CHHHHHHhCCccc---ccCCCccceEEEEeCCCCCCCCCCcch---HHHhcCCCEEEEEeCCCCccccccccccCccc
Q 008093 337 E-TVDTYYRNCSSST---YVGNVSIPLLCISSLDDPVCTVEAIPW---DECRANKNVVLATTWHGGHLAFFEGLTAAGMW 409 (578)
Q Consensus 337 ~-~~~~yy~~~s~~~---~l~~I~vPvLiI~g~dDpivp~~~~~~---~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w 409 (578)
. .-++-|...|... .+.+=.-.+|++||-=|.-|...+... ...++++.-++.++|+-.|..=-- .....
T Consensus 779 P~~nE~gY~agSV~~~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~~---es~~~ 855 (867)
T KOG2281|consen 779 PDNNEHGYGAGSVAGHVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRNP---ESGIY 855 (867)
T ss_pred CccchhcccchhHHHHHhhCCCCCceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccCCC---ccchh
Confidence 2 1112222222222 233334569999999999888764433 356788889999999999965322 12236
Q ss_pred HHHHHHHHHHh
Q 008093 410 WVRAVNEYLGV 420 (578)
Q Consensus 410 ~~~~v~eFL~~ 420 (578)
+...+..|+++
T Consensus 856 yE~rll~FlQ~ 866 (867)
T KOG2281|consen 856 YEARLLHFLQE 866 (867)
T ss_pred HHHHHHHHHhh
Confidence 78889999875
|
|
| >KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.57 E-value=2.4e-07 Score=87.29 Aligned_cols=185 Identities=15% Similarity=0.102 Sum_probs=113.3
Q ss_pred CCCcEEEEECCC---CCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCc
Q 008093 158 DTTPIAIVIPGL---TSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAP 234 (578)
Q Consensus 158 ~~~PiVVllHGl---~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~ 234 (578)
...|+.||+||- .|+... . -..+..+.++||+|+.++|--+... +. ...-..|+..-++++.+.+++.+
T Consensus 65 ~~~klfIfIHGGYW~~g~rk~-c-lsiv~~a~~~gY~vasvgY~l~~q~-----ht-L~qt~~~~~~gv~filk~~~n~k 136 (270)
T KOG4627|consen 65 NQAKLFIFIHGGYWQEGDRKM-C-LSIVGPAVRRGYRVASVGYNLCPQV-----HT-LEQTMTQFTHGVNFILKYTENTK 136 (270)
T ss_pred CCccEEEEEecchhhcCchhc-c-cchhhhhhhcCeEEEEeccCcCccc-----cc-HHHHHHHHHHHHHHHHHhcccce
Confidence 456899999992 122221 1 3567778899999999976322211 00 11234688888999999998764
Q ss_pred -EEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCH
Q 008093 235 -LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANW 313 (578)
Q Consensus 235 -i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~ 313 (578)
+.+-|||.|+.+++....+..+ .+|.|+++.|+.+++..-...
T Consensus 137 ~l~~gGHSaGAHLa~qav~R~r~-prI~gl~l~~GvY~l~EL~~t----------------------------------- 180 (270)
T KOG4627|consen 137 VLTFGGHSAGAHLAAQAVMRQRS-PRIWGLILLCGVYDLRELSNT----------------------------------- 180 (270)
T ss_pred eEEEcccchHHHHHHHHHHHhcC-chHHHHHHHhhHhhHHHHhCC-----------------------------------
Confidence 7778999999999998877543 379998888877665321000
Q ss_pred HHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcc-cccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeC
Q 008093 314 EGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSS-TYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTW 392 (578)
Q Consensus 314 ~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~-~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~ 392 (578)
.+.. | -|..+ +--+.+||. ..+..+++|+|++.|+.|.---.+.- ++.........+..++
T Consensus 181 ------e~g~--d-------lgLt~--~~ae~~Scdl~~~~~v~~~ilVv~~~~espklieQn-rdf~~q~~~a~~~~f~ 242 (270)
T KOG4627|consen 181 ------ESGN--D-------LGLTE--RNAESVSCDLWEYTDVTVWILVVAAEHESPKLIEQN-RDFADQLRKASFTLFK 242 (270)
T ss_pred ------cccc--c-------cCccc--chhhhcCccHHHhcCceeeeeEeeecccCcHHHHhh-hhHHHHhhhcceeecC
Confidence 0000 0 00000 000122332 45678899999999998832111111 1223333457888999
Q ss_pred CCCccccccccc
Q 008093 393 HGGHLAFFEGLT 404 (578)
Q Consensus 393 ~GGH~~~~eg~~ 404 (578)
+.+|...++...
T Consensus 243 n~~hy~I~~~~~ 254 (270)
T KOG4627|consen 243 NYDHYDIIEETA 254 (270)
T ss_pred CcchhhHHHHhc
Confidence 999999888643
|
|
| >PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A | Back alignment and domain information |
|---|
Probab=98.54 E-value=2.1e-07 Score=98.96 Aligned_cols=106 Identities=17% Similarity=0.215 Sum_probs=62.0
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCC-C-C-CCC-----C-----C-------CCC---C
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGV-S-I-TSD-----C-----F-------YNA---G 214 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S-~-~-~~~-----~-----~-------~~~---~ 214 (578)
..-|+|||-||++| +...| ..++..|+.+||-|+++|+|..-.. . . ... . . +.. .
T Consensus 98 ~~~PvvIFSHGlgg-~R~~y-S~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (379)
T PF03403_consen 98 GKFPVVIFSHGLGG-SRTSY-SAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPE 175 (379)
T ss_dssp S-EEEEEEE--TT---TTTT-HHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GG
T ss_pred CCCCEEEEeCCCCc-chhhH-HHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccch
Confidence 45799999999955 55567 7899999999999999999954211 0 0 000 0 0 000 0
Q ss_pred ------------chHHHHHHHHHHHHHC----------------------CCCcEEEEEEchHHHHHHHHHhhcCCCCCc
Q 008093 215 ------------WTEDAREVIGYLHHEY----------------------PKAPLFAIGTSIGANILVKYLGEEGEKTPV 260 (578)
Q Consensus 215 ------------~~~Dl~~~i~~l~~~~----------------------~~~~i~lvGhSmGG~ial~ya~~~p~~~~V 260 (578)
...|+..+++.+.+.. .-.++.++|||+||..++..+.... ++
T Consensus 176 ~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d~---r~ 252 (379)
T PF03403_consen 176 EEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQDT---RF 252 (379)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH-T---T-
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhcc---Cc
Confidence 0246777777775311 1236999999999999998887763 69
Q ss_pred cEEEEEcC
Q 008093 261 AGAAAICS 268 (578)
Q Consensus 261 ~~~Vlis~ 268 (578)
+++|++++
T Consensus 253 ~~~I~LD~ 260 (379)
T PF03403_consen 253 KAGILLDP 260 (379)
T ss_dssp -EEEEES-
T ss_pred ceEEEeCC
Confidence 99998854
|
|
| >PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins | Back alignment and domain information |
|---|
Probab=98.53 E-value=5e-06 Score=84.85 Aligned_cols=118 Identities=19% Similarity=0.213 Sum_probs=81.5
Q ss_pred CeeEEEEEecCCcEE-EEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHH-----HHHHHHHHhCCceE
Q 008093 119 SYRRQLFRLSDGGMI-ALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYI-----RHLVFNTAKRGWNV 192 (578)
Q Consensus 119 ~y~r~~l~~~DG~~i-~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi-----~~l~~~l~~~Gy~V 192 (578)
.++|..+.. |+..| ++....+ + ..+...||++-|.++.-...++ ..+...+.+.|-+|
T Consensus 111 ~~kRv~Iq~-D~~~IDt~~I~~~-~--------------a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNv 174 (365)
T PF05677_consen 111 SVKRVPIQY-DGVKIDTMAIHQP-E--------------AKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANV 174 (365)
T ss_pred ceeeEEEee-CCEEEEEEEeeCC-C--------------CCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcE
Confidence 457777776 77665 3332211 1 2345679999998544333222 23445555678999
Q ss_pred EEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC---CCCcEEEEEEchHHHHHHHHHhhcC
Q 008093 193 VVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY---PKAPLFAIGTSIGANILVKYLGEEG 255 (578)
Q Consensus 193 vv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~---~~~~i~lvGhSmGG~ial~ya~~~p 255 (578)
+++||||.|.|.+... ......|..++++|++++. ....|++.|||+||.++...+..+.
T Consensus 175 l~fNYpGVg~S~G~~s---~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~ 237 (365)
T PF05677_consen 175 LVFNYPGVGSSTGPPS---RKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEV 237 (365)
T ss_pred EEECCCccccCCCCCC---HHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcc
Confidence 9999999999976643 2466789999999998643 2357999999999999988766653
|
|
| >PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins | Back alignment and domain information |
|---|
Probab=98.46 E-value=1.5e-06 Score=82.16 Aligned_cols=101 Identities=18% Similarity=0.137 Sum_probs=77.9
Q ss_pred EEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEc
Q 008093 162 IAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTS 241 (578)
Q Consensus 162 iVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhS 241 (578)
.+|++-|=+|-. ..-+.++..|+++|+.|+.+|-+-+=.+..+ | .....|+.+++++..++.+..+++++|+|
T Consensus 4 ~~v~~SGDgGw~--~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~rt-P----~~~a~Dl~~~i~~y~~~w~~~~vvLiGYS 76 (192)
T PF06057_consen 4 LAVFFSGDGGWR--DLDKQIAEALAKQGVPVVGVDSLRYFWSERT-P----EQTAADLARIIRHYRARWGRKRVVLIGYS 76 (192)
T ss_pred EEEEEeCCCCch--hhhHHHHHHHHHCCCeEEEechHHHHhhhCC-H----HHHHHHHHHHHHHHHHHhCCceEEEEeec
Confidence 577888864433 3347889999999999999998765444333 2 23468999999999999999999999999
Q ss_pred hHHHHHHHHHhhcCCC--CCccEEEEEcCC
Q 008093 242 IGANILVKYLGEEGEK--TPVAGAAAICSP 269 (578)
Q Consensus 242 mGG~ial~ya~~~p~~--~~V~~~Vlis~p 269 (578)
+|+-++-....+.|.. .+|+.++++++.
T Consensus 77 FGADvlP~~~nrLp~~~r~~v~~v~Ll~p~ 106 (192)
T PF06057_consen 77 FGADVLPFIYNRLPAALRARVAQVVLLSPS 106 (192)
T ss_pred CCchhHHHHHhhCCHHHHhheeEEEEeccC
Confidence 9998888777766642 268899988764
|
VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium []. |
| >PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids [] | Back alignment and domain information |
|---|
Probab=98.44 E-value=1.4e-07 Score=92.43 Aligned_cols=90 Identities=13% Similarity=0.174 Sum_probs=58.0
Q ss_pred EEEECCCCCCCccHHHHHHHHHHHhCCce---EEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEE
Q 008093 163 AIVIPGLTSDSAASYIRHLVFNTAKRGWN---VVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIG 239 (578)
Q Consensus 163 VVllHGl~G~s~~~yi~~l~~~l~~~Gy~---Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG 239 (578)
|||+||..++....| ..+++.|.++||. ++++++-...................+++++|+.+++..+. ++-+||
T Consensus 4 VVlVHG~~~~~~~~w-~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIVg 81 (219)
T PF01674_consen 4 VVLVHGTGGNAYSNW-STLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIVG 81 (219)
T ss_dssp EEEE--TTTTTCGGC-CHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEEE
T ss_pred EEEECCCCcchhhCH-HHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEEE
Confidence 889999977566667 7889999999999 79999944433211100000112346888999999887777 999999
Q ss_pred EchHHHHHHHHHhhc
Q 008093 240 TSIGANILVKYLGEE 254 (578)
Q Consensus 240 hSmGG~ial~ya~~~ 254 (578)
|||||.++-.|+...
T Consensus 82 HS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 82 HSMGGTIARYYIKGG 96 (219)
T ss_dssp ETCHHHHHHHHHHHC
T ss_pred cCCcCHHHHHHHHHc
Confidence 999999998887543
|
This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A .... |
| >COG4099 Predicted peptidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.3e-05 Score=79.81 Aligned_cols=123 Identities=14% Similarity=0.136 Sum_probs=72.3
Q ss_pred CCcEEEEEEecCCCCCCCccccccccCCCCCC-cEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCC---CCC
Q 008093 129 DGGMIALDWLMGSTGPGDVFHANNFISKDDTT-PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLG---GVS 204 (578)
Q Consensus 129 DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~-PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G---~S~ 204 (578)
-|..+.+..+.|.+- ..+..- |.|||+||-+......+ ..+ + .|.-.++.+.+-.+ .++
T Consensus 170 tgneLkYrly~Pkdy-----------~pdkky~PLvlfLHgagq~g~dn~-~~l---~--sg~gaiawa~pedqcfVlAP 232 (387)
T COG4099 170 TGNELKYRLYTPKDY-----------APDKKYYPLVLFLHGAGQGGSDND-KVL---S--SGIGAIAWAGPEDQCFVLAP 232 (387)
T ss_pred cCceeeEEEeccccc-----------CCCCccccEEEEEecCCCCCchhh-hhh---h--cCccceeeecccCceEEEcc
Confidence 466777777777542 223333 99999999854444444 221 1 12333333333322 011
Q ss_pred CCCCCCCC------CCchHHHHHHHH-HHHHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcc
Q 008093 205 ITSDCFYN------AGWTEDAREVIG-YLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (578)
Q Consensus 205 ~~~~~~~~------~~~~~Dl~~~i~-~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d 271 (578)
--.+ .+. .........+++ -+..+| +..+|+++|.|+||.-++.++.++|+ .+++++.||+.+|
T Consensus 233 Qy~~-if~d~e~~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPd--fFAaa~~iaG~~d 305 (387)
T COG4099 233 QYNP-IFADSEEKTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPD--FFAAAVPIAGGGD 305 (387)
T ss_pred cccc-cccccccccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCch--hhheeeeecCCCc
Confidence 0000 000 111122333333 444555 35689999999999999999999999 8999999998775
|
|
| >PLN02733 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=98.36 E-value=1.1e-06 Score=95.00 Aligned_cols=96 Identities=14% Similarity=0.121 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcC
Q 008093 176 SYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEG 255 (578)
Q Consensus 176 ~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p 255 (578)
.|+..+++.|.+.||.+ ..|++|+|.+-..... .....+++.+.++.+.+.++..+++++||||||.++..++..++
T Consensus 108 ~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~~--~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p 184 (440)
T PLN02733 108 YYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSNR--LPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHS 184 (440)
T ss_pred HHHHHHHHHHHHcCCcc-CCCcccCCCCcccccc--HHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCC
Confidence 45689999999999866 7899999987443211 12345889999999988888889999999999999999998876
Q ss_pred CC--CCccEEEEEcCCcchhh
Q 008093 256 EK--TPVAGAAAICSPWDLLI 274 (578)
Q Consensus 256 ~~--~~V~~~Vlis~p~d~~~ 274 (578)
+. ..|+.+|++++|++...
T Consensus 185 ~~~~k~I~~~I~la~P~~Gs~ 205 (440)
T PLN02733 185 DVFEKYVNSWIAIAAPFQGAP 205 (440)
T ss_pred HhHHhHhccEEEECCCCCCCc
Confidence 52 25899999999987653
|
|
| >PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=98.34 E-value=1.3e-06 Score=85.63 Aligned_cols=103 Identities=19% Similarity=0.183 Sum_probs=79.4
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC----C--
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY----P-- 231 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~----~-- 231 (578)
..-|+|+|+||+. -..+.| ..+..+++.+||-|+++++-..-. + ......++..++++|+.... |
T Consensus 44 G~yPVilF~HG~~-l~ns~Y-s~lL~HIASHGfIVVAPQl~~~~~-----p--~~~~Ei~~aa~V~~WL~~gL~~~Lp~~ 114 (307)
T PF07224_consen 44 GTYPVILFLHGFN-LYNSFY-SQLLAHIASHGFIVVAPQLYTLFP-----P--DGQDEIKSAASVINWLPEGLQHVLPEN 114 (307)
T ss_pred CCccEEEEeechh-hhhHHH-HHHHHHHhhcCeEEEechhhcccC-----C--CchHHHHHHHHHHHHHHhhhhhhCCCC
Confidence 4569999999994 456666 888899999999999999865321 1 12345678889999987653 2
Q ss_pred ----CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCC
Q 008093 232 ----KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSP 269 (578)
Q Consensus 232 ----~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p 269 (578)
-.++.++|||.||-.|..+|..+..+..+.++|.++|.
T Consensus 115 V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV 156 (307)
T PF07224_consen 115 VEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPV 156 (307)
T ss_pred cccccceEEEeecCCccHHHHHHHhcccccCchhheeccccc
Confidence 35899999999999999988877655578888888764
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3 | Back alignment and domain information |
|---|
Probab=98.30 E-value=4.7e-07 Score=94.49 Aligned_cols=108 Identities=18% Similarity=0.258 Sum_probs=67.4
Q ss_pred CCCCcEEEEECCCCCCC-ccHHHHHHHHHHHhC---CceEEEEeCCCCCCCCCCCCCCCCC--Cch----HHHHHHHHHH
Q 008093 157 DDTTPIAIVIPGLTSDS-AASYIRHLVFNTAKR---GWNVVVSNHRGLGGVSITSDCFYNA--GWT----EDAREVIGYL 226 (578)
Q Consensus 157 ~~~~PiVVllHGl~G~s-~~~yi~~l~~~l~~~---Gy~Vvv~D~RG~G~S~~~~~~~~~~--~~~----~Dl~~~i~~l 226 (578)
+..+|++|++|||.++. ...|+..+...+.++ +++|+++|+...... .|.. ..+ ..+..++..+
T Consensus 68 n~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~------~Y~~a~~n~~~vg~~la~~l~~L 141 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASN------NYPQAVANTRLVGRQLAKFLSFL 141 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccc------cccchhhhHHHHHHHHHHHHHHH
Confidence 46789999999998877 567778888876654 799999999643221 1221 112 3555666666
Q ss_pred HHH--CCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 227 HHE--YPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 227 ~~~--~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
... .+.+++++|||||||.++...........+|..++.++|..
T Consensus 142 ~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAg 187 (331)
T PF00151_consen 142 INNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAG 187 (331)
T ss_dssp HHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-
T ss_pred HhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccc
Confidence 633 35678999999999999986555544323688888888754
|
1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A .... |
| >PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH | Back alignment and domain information |
|---|
Probab=98.27 E-value=1.1e-06 Score=86.14 Aligned_cols=155 Identities=19% Similarity=0.112 Sum_probs=73.0
Q ss_pred HHHHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHH
Q 008093 217 EDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTI 294 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~ 294 (578)
+-+.+++++++++- ...+|.++|.|.||-+++.++..++. |+++|+++++.-............ +
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~~---i~avVa~~ps~~~~~~~~~~~~~~------~---- 70 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFPQ---ISAVVAISPSSVVFQGIGFYRDSS------K---- 70 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSSS---EEEEEEES--SB--SSEEEETTE------------
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCCC---ccEEEEeCCceeEecchhcccCCC------c----
Confidence 45788999998763 23689999999999999999999985 999999987653332211110000 0
Q ss_pred hHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCC
Q 008093 295 GLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEA 374 (578)
Q Consensus 295 ~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~ 374 (578)
..+.+. .+....... ..........+....+- ....+.-.+++|++|+|+|.|+||.+.|...
T Consensus 71 --------~lp~~~--~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~~~a~IpvE~i~~piLli~g~dD~~WpS~~ 133 (213)
T PF08840_consen 71 --------PLPYLP--FDISKFSWN------EPGLLRSRYAFELADDK-AVEEARIPVEKIKGPILLISGEDDQIWPSSE 133 (213)
T ss_dssp --------EE------B-GGG-EE-------TTS-EE-TT-B--TTTG-GGCCCB--GGG--SEEEEEEETT-SSS-HHH
T ss_pred --------cCCcCC--cChhhceec------CCcceehhhhhhccccc-ccccccccHHHcCCCEEEEEeCCCCccchHH
Confidence 000000 000000000 00000000000000000 0111223578899999999999999998763
Q ss_pred cch----HHHh-cCC-CEEEEEeCCCCcccccc
Q 008093 375 IPW----DECR-ANK-NVVLATTWHGGHLAFFE 401 (578)
Q Consensus 375 ~~~----~~~~-~~~-~~~l~~~~~GGH~~~~e 401 (578)
... .+.+ ..+ +.+++.++++||+....
T Consensus 134 ~a~~i~~rL~~~~~~~~~~~l~Y~~aGH~i~~P 166 (213)
T PF08840_consen 134 MAEQIEERLKAAGFPHNVEHLSYPGAGHLIEPP 166 (213)
T ss_dssp HHHHHHHHHHCTT-----EEEEETTB-S---ST
T ss_pred HHHHHHHHHHHhCCCCcceEEEcCCCCceecCC
Confidence 332 1112 223 57889999999987543
|
Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B. |
| >PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins | Back alignment and domain information |
|---|
Probab=98.23 E-value=3.8e-05 Score=76.58 Aligned_cols=218 Identities=16% Similarity=0.129 Sum_probs=120.2
Q ss_pred EEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCC--CcEEEEEE
Q 008093 163 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPK--APLFAIGT 240 (578)
Q Consensus 163 VVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~--~~i~lvGh 240 (578)
+|++=||.| +....+...+....+.|++++.+-.+-....... .+...-+..+++.+.+.... .++++..+
T Consensus 2 lvvl~gW~g-A~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~~~------~~~~~~~~~l~~~l~~~~~~~~~~il~H~F 74 (240)
T PF05705_consen 2 LVVLLGWMG-AKPKHLAKYSDLYQDPGFDILLVTSPPADFFWPS------KRLAPAADKLLELLSDSQSASPPPILFHSF 74 (240)
T ss_pred EEEEEeCCC-CCHHHHHHHHHHHHhcCCeEEEEeCCHHHHeeec------cchHHHHHHHHHHhhhhccCCCCCEEEEEE
Confidence 567778865 4544556667777789999999866532211110 12223334455555443322 38999999
Q ss_pred chHHHHHHHHHhh----cC---CCC-CccEEEEEcCCcchhh--hhHHHhhHHHHH----HH--HHHHHHhHHHHHhhhc
Q 008093 241 SIGANILVKYLGE----EG---EKT-PVAGAAAICSPWDLLI--GDRFIGRRLIQK----IY--DRALTIGLQDYAQLHE 304 (578)
Q Consensus 241 SmGG~ial~ya~~----~p---~~~-~V~~~Vlis~p~d~~~--~~~~l~~~~~~~----~~--~~~l~~~l~~~~~~~~ 304 (578)
|.||...+..+.+ .. ... +++|.|.-|+|..... ....+....... ++ ...+...+...
T Consensus 75 SnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 149 (240)
T PF05705_consen 75 SNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTYSSSARAFSAALPKSSPRWFVPLWPLLQFLLRLS----- 149 (240)
T ss_pred ECchHHHHHHHHHHHHhcccccccccccceeEEeCCCCccccccHHHHHHHHcCccchhhHHHHHHHHHHHHHHH-----
Confidence 9988887765442 11 111 3899999988854322 111111000000 00 00000000000
Q ss_pred ccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchH---HHh
Q 008093 305 PRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWD---ECR 381 (578)
Q Consensus 305 ~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~---~~~ 381 (578)
.......+......++.............+|-|+|.+++|++++.+.++.. ..+
T Consensus 150 -----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~ 206 (240)
T PF05705_consen 150 -----------------------IISYFIFGYPDVQEYYRRALNDFANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARR 206 (240)
T ss_pred -----------------------HHHHHHhcCCcHHHHHHHHHhhhhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHH
Confidence 000011233333344433322233345579999999999999999866542 234
Q ss_pred cCCCEEEEEeCCCCccccccccccCcccHHHHHHHHH
Q 008093 382 ANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYL 418 (578)
Q Consensus 382 ~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL 418 (578)
..-.+.....++++|++++. .++..+.+.+.+|+
T Consensus 207 ~G~~V~~~~f~~S~HV~H~r---~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 207 KGWDVRAEKFEDSPHVAHLR---KHPDRYWRAVDEFW 240 (240)
T ss_pred cCCeEEEecCCCCchhhhcc---cCHHHHHHHHHhhC
Confidence 45568888999999999998 34445778888773
|
|
| >KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.19 E-value=1.3e-05 Score=80.98 Aligned_cols=135 Identities=19% Similarity=0.175 Sum_probs=90.4
Q ss_pred CCCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEe
Q 008093 117 CFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSN 196 (578)
Q Consensus 117 ~~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D 196 (578)
.-..+|-.+...||.+|..-+...... ...+....||++-|..|--.- ..+..-++.||.|+.+|
T Consensus 211 ~~NG~R~kiks~dgneiDtmF~d~r~n-----------~~~ngq~LvIC~EGNAGFYEv----G~m~tP~~lgYsvLGwN 275 (517)
T KOG1553|consen 211 NKNGQRLKIKSSDGNEIDTMFLDGRPN-----------QSGNGQDLVICFEGNAGFYEV----GVMNTPAQLGYSVLGWN 275 (517)
T ss_pred cCCCeEEEEeecCCcchhheeecCCCC-----------CCCCCceEEEEecCCccceEe----eeecChHHhCceeeccC
Confidence 345677788888888775333322110 112445678888898664332 22233356799999999
Q ss_pred CCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH--CCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcch
Q 008093 197 HRGLGGVSITSDCFYNAGWTEDAREVIGYLHHE--YPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (578)
Q Consensus 197 ~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~--~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~ 272 (578)
++|+++|.+.+- ......-+.+++++..+. ++...|++.|+|.||..++-.|..+|+ |+++|+-++--|+
T Consensus 276 hPGFagSTG~P~---p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd---VkavvLDAtFDDl 347 (517)
T KOG1553|consen 276 HPGFAGSTGLPY---PVNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD---VKAVVLDATFDDL 347 (517)
T ss_pred CCCccccCCCCC---cccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC---ceEEEeecchhhh
Confidence 999999977632 222233445566666554 467789999999999999988888987 9998876554444
|
|
| >PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=98.19 E-value=1.3e-05 Score=79.64 Aligned_cols=114 Identities=11% Similarity=0.070 Sum_probs=75.2
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCc--eEEEEeCCCCCCCCCC-CCCCCCCCchHHHHHHHHHHHHHCCCCc
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGW--NVVVSNHRGLGGVSIT-SDCFYNAGWTEDAREVIGYLHHEYPKAP 234 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy--~Vvv~D~RG~G~S~~~-~~~~~~~~~~~Dl~~~i~~l~~~~~~~~ 234 (578)
+.+.++|++||+.. +-+.-+...+......|| .+++|.+|+.|....- ..+........++.++++.+....+..+
T Consensus 16 ~~~~vlvfVHGyn~-~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~ 94 (233)
T PF05990_consen 16 PDKEVLVFVHGYNN-SFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKR 94 (233)
T ss_pred CCCeEEEEEeCCCC-CHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCce
Confidence 56789999999954 433333455554444455 7999999988863111 0111001112577888888877767889
Q ss_pred EEEEEEchHHHHHHHHHhhcCCC-------CCccEEEEEcCCcch
Q 008093 235 LFAIGTSIGANILVKYLGEEGEK-------TPVAGAAAICSPWDL 272 (578)
Q Consensus 235 i~lvGhSmGG~ial~ya~~~p~~-------~~V~~~Vlis~p~d~ 272 (578)
|.+++||||+.+++..+...... ..+..+++++|-.+.
T Consensus 95 I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 95 IHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred EEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 99999999999999876543211 257788888776655
|
|
| >PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family | Back alignment and domain information |
|---|
Probab=98.16 E-value=1.9e-06 Score=84.43 Aligned_cols=109 Identities=17% Similarity=0.168 Sum_probs=47.4
Q ss_pred CCcEEEEECCCCCCCccHHH---HHHHHHHHhCCceEEEEeCCCC-----CCCCC---------CCC---CCCCCC----
Q 008093 159 TTPIAIVIPGLTSDSAASYI---RHLVFNTAKRGWNVVVSNHRGL-----GGVSI---------TSD---CFYNAG---- 214 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi---~~l~~~l~~~Gy~Vvv~D~RG~-----G~S~~---------~~~---~~~~~~---- 214 (578)
.++-||++||+ |++.+.+- ..+...|.+.++..+-+|-+-- |-... ... ..+...
T Consensus 3 ~k~riLcLHG~-~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 81 (212)
T PF03959_consen 3 RKPRILCLHGY-GQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDH 81 (212)
T ss_dssp ---EEEEE--T-T--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SG
T ss_pred CCceEEEeCCC-CcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCcc
Confidence 45779999999 55665441 2333344433899988885431 11110 000 111111
Q ss_pred chHHHHHHHHH----HHHHCCCCcEEEEEEchHHHHHHHHHhhcC------CCCCccEEEEEcCCc
Q 008093 215 WTEDAREVIGY----LHHEYPKAPLFAIGTSIGANILVKYLGEEG------EKTPVAGAAAICSPW 270 (578)
Q Consensus 215 ~~~Dl~~~i~~----l~~~~~~~~i~lvGhSmGG~ial~ya~~~p------~~~~V~~~Vlis~p~ 270 (578)
...++.+.+++ +.+.-| =..++|+|.||.++..++.... ...+++.+|++|+..
T Consensus 82 ~~~~~~~sl~~l~~~i~~~GP--fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~ 145 (212)
T PF03959_consen 82 EYEGLDESLDYLRDYIEENGP--FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFP 145 (212)
T ss_dssp GG---HHHHHHHHHHHHHH-----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES---
T ss_pred cccCHHHHHHHHHHHHHhcCC--eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccC
Confidence 12334444444 444333 2579999999999998875421 123688889887643
|
It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A. |
| >KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.14 E-value=9.9e-06 Score=88.07 Aligned_cols=142 Identities=18% Similarity=0.162 Sum_probs=98.4
Q ss_pred CeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCC
Q 008093 119 SYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHR 198 (578)
Q Consensus 119 ~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~R 198 (578)
.-+|..+...||..+.+-.....+. ..+.++|.+|..+|.-|-+-..+++.--..|.++|+-.+..|.|
T Consensus 440 ~~~r~~~~SkDGt~VPM~Iv~kk~~-----------k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VR 508 (712)
T KOG2237|consen 440 VVERIEVSSKDGTKVPMFIVYKKDI-----------KLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVR 508 (712)
T ss_pred EEEEEEEecCCCCccceEEEEechh-----------hhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeec
Confidence 3456677788999998887764331 22457898888887655554444343334466799999999999
Q ss_pred CCCCCCCC---CCCCCC-CCchHHHHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcch
Q 008093 199 GLGGVSIT---SDCFYN-AGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (578)
Q Consensus 199 G~G~S~~~---~~~~~~-~~~~~Dl~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~ 272 (578)
|-|.-... ..+.-. -...+|+.+.++++.... ...++.+.|.|.||.++......+|+ .+.++|+=.+..|+
T Consensus 509 GGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPd--LF~avia~VpfmDv 586 (712)
T KOG2237|consen 509 GGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPD--LFGAVIAKVPFMDV 586 (712)
T ss_pred cCcccccchhhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCch--HhhhhhhcCcceeh
Confidence 97764321 111111 133489999999998753 35689999999999999999999998 67777665555565
Q ss_pred h
Q 008093 273 L 273 (578)
Q Consensus 273 ~ 273 (578)
.
T Consensus 587 L 587 (712)
T KOG2237|consen 587 L 587 (712)
T ss_pred h
Confidence 4
|
|
| >COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.14 E-value=2.4e-05 Score=78.40 Aligned_cols=125 Identities=18% Similarity=0.165 Sum_probs=87.4
Q ss_pred CCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHH--HHH-HhCCceEEEEeC-------C
Q 008093 129 DGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLV--FNT-AKRGWNVVVSNH-------R 198 (578)
Q Consensus 129 DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~--~~l-~~~Gy~Vvv~D~-------R 198 (578)
+|....+..+.|+.. +.+.|+||++||-.+ +...+ .+.. ..+ .+.||-|+.+|- -
T Consensus 43 ~g~~r~y~l~vP~g~-------------~~~apLvv~LHG~~~-sgag~-~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~ 107 (312)
T COG3509 43 NGLKRSYRLYVPPGL-------------PSGAPLVVVLHGSGG-SGAGQ-LHGTGWDALADREGFLVAYPDGYDRAWNAN 107 (312)
T ss_pred CCCccceEEEcCCCC-------------CCCCCEEEEEecCCC-ChHHh-hcccchhhhhcccCcEEECcCccccccCCC
Confidence 556666667777553 345699999999855 44434 3333 333 456999999842 2
Q ss_pred CCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCC--CcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 199 GLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPK--APLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 199 G~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~--~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
|++.+....++.-..+...++.++++.+..+|+- .++++.|.|-||.++..++.++++ .+.++..++...
T Consensus 108 ~~~~~~~p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~--~faa~A~VAg~~ 179 (312)
T COG3509 108 GCGNWFGPADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPD--IFAAIAPVAGLL 179 (312)
T ss_pred cccccCCcccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcc--cccceeeeeccc
Confidence 3444433333333445667889999999999964 489999999999999999999998 788877777654
|
|
| >PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria | Back alignment and domain information |
|---|
Probab=98.12 E-value=5.2e-05 Score=81.14 Aligned_cols=102 Identities=15% Similarity=0.099 Sum_probs=67.4
Q ss_pred CCCcEEEEEC------CCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHH----HHHHHHHH
Q 008093 158 DTTPIAIVIP------GLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDA----REVIGYLH 227 (578)
Q Consensus 158 ~~~PiVVllH------Gl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl----~~~i~~l~ 227 (578)
..+|.||+=+ |++|-... +-+-.+.+.|+.|+.+...- .+.+. .-.+|+ .++++.+.
T Consensus 67 ~krP~vViDPRAGHGpGIGGFK~d----SevG~AL~~GHPvYFV~F~p-----~P~pg----QTl~DV~~ae~~Fv~~V~ 133 (581)
T PF11339_consen 67 TKRPFVVIDPRAGHGPGIGGFKPD----SEVGVALRAGHPVYFVGFFP-----EPEPG----QTLEDVMRAEAAFVEEVA 133 (581)
T ss_pred CCCCeEEeCCCCCCCCCccCCCcc----cHHHHHHHcCCCeEEEEecC-----CCCCC----CcHHHHHHHHHHHHHHHH
Confidence 4567666643 46443332 23344456699998887641 11111 122444 45666777
Q ss_pred HHCCCC-cEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhh
Q 008093 228 HEYPKA-PLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLI 274 (578)
Q Consensus 228 ~~~~~~-~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~ 274 (578)
...|.. +.+++|-+.||..++.+|+..|+ .+.-+|+-++|.+...
T Consensus 134 ~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd--~~gplvlaGaPlsywa 179 (581)
T PF11339_consen 134 ERHPDAPKPNLIGNCQGGWAAMMLAALRPD--LVGPLVLAGAPLSYWA 179 (581)
T ss_pred HhCCCCCCceEEeccHHHHHHHHHHhcCcC--ccCceeecCCCccccc
Confidence 778765 89999999999999999999999 6767777777876654
|
Their function is unknown. |
| >COG1770 PtrB Protease II [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.12 E-value=2.6e-05 Score=85.50 Aligned_cols=228 Identities=20% Similarity=0.206 Sum_probs=140.9
Q ss_pred eEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCC
Q 008093 121 RRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGL 200 (578)
Q Consensus 121 ~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~ 200 (578)
+|...+..||..|....+...+. ..+.+.|+++..-|--|.+....+....-.|.++||--....-||-
T Consensus 420 ~riwa~a~dgv~VPVSLvyrkd~-----------~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGG 488 (682)
T COG1770 420 RRIWATADDGVQVPVSLVYRKDT-----------KLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGG 488 (682)
T ss_pred EEEEEEcCCCcEeeEEEEEeccc-----------CCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecc
Confidence 44455667999988777765441 2356789999999877776665556566678899998888888986
Q ss_pred CCCCCC---CCCCCC-CCchHHHHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhh
Q 008093 201 GGVSIT---SDCFYN-AGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLI 274 (578)
Q Consensus 201 G~S~~~---~~~~~~-~~~~~Dl~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~ 274 (578)
|.-... ..+..+ ..-..|+.++.+++.+.- ....++++|-|.||+++...+.+.|+ .++++|+-.|-.|...
T Consensus 489 gelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~--lf~~iiA~VPFVDvlt 566 (682)
T COG1770 489 GELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPD--LFAGIIAQVPFVDVLT 566 (682)
T ss_pred cccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChh--hhhheeecCCccchhh
Confidence 653211 111111 112379999999998753 24479999999999999999999998 7888887766555532
Q ss_pred hhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCC
Q 008093 275 GDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGN 354 (578)
Q Consensus 275 ~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~ 354 (578)
.. .+ +.+ .-+..||++.-... -+..-+|....|+.+.+..
T Consensus 567 TM-----------lD---------------~sl-----------PLT~~E~~EWGNP~---d~e~y~yikSYSPYdNV~a 606 (682)
T COG1770 567 TM-----------LD---------------PSL-----------PLTVTEWDEWGNPL---DPEYYDYIKSYSPYDNVEA 606 (682)
T ss_pred hh-----------cC---------------CCC-----------CCCccchhhhCCcC---CHHHHHHHhhcCchhcccc
Confidence 21 00 000 11222333321000 1123345555566655544
Q ss_pred C-ccceEEEEeCCCCCCCCCC-cchH----HHhcCCCEEEEEe-CCCCcccccc
Q 008093 355 V-SIPLLCISSLDDPVCTVEA-IPWD----ECRANKNVVLATT-WHGGHLAFFE 401 (578)
Q Consensus 355 I-~vPvLiI~g~dDpivp~~~-~~~~----~~~~~~~~~l~~~-~~GGH~~~~e 401 (578)
- --|+|++.|.+|+-|..-. ..+. ......+..+..+ -.+||-|.-.
T Consensus 607 ~~YP~ilv~~Gl~D~rV~YwEpAKWvAkLR~~~td~~plLlkt~M~aGHgG~Sg 660 (682)
T COG1770 607 QPYPAILVTTGLNDPRVQYWEPAKWVAKLRELKTDGNPLLLKTNMDAGHGGASG 660 (682)
T ss_pred CCCCceEEEccccCCccccchHHHHHHHHhhcccCCCcEEEEecccccCCCCCC
Confidence 3 3578999999999998642 2221 1122233344444 5789976543
|
|
| >KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.11 E-value=3.7e-05 Score=77.15 Aligned_cols=106 Identities=18% Similarity=0.267 Sum_probs=69.7
Q ss_pred CCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCC------CC-CCC---------CCCCCCc-----
Q 008093 157 DDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGV------SI-TSD---------CFYNAGW----- 215 (578)
Q Consensus 157 ~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S------~~-~~~---------~~~~~~~----- 215 (578)
++.-|+|||-||+ |++..-| ..++-.++.+||-|.++.+|-+.-. +. ..+ +....+.
T Consensus 115 ~~k~PvvvFSHGL-ggsRt~Y-Sa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~i 192 (399)
T KOG3847|consen 115 NDKYPVVVFSHGL-GGSRTLY-SAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHI 192 (399)
T ss_pred CCCccEEEEeccc-ccchhhH-HHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEe
Confidence 3567999999999 5577777 7889999999999999999976532 11 000 0000010
Q ss_pred --------hHHHHHHHHHHHHH-----------------------CCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEE
Q 008093 216 --------TEDAREVIGYLHHE-----------------------YPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAA 264 (578)
Q Consensus 216 --------~~Dl~~~i~~l~~~-----------------------~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~V 264 (578)
..+...+++-+.+- ...+++.++|||+||..++..++.+.+ ++++|
T Consensus 193 rNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t~---FrcaI 269 (399)
T KOG3847|consen 193 RNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHTD---FRCAI 269 (399)
T ss_pred eCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccccc---eeeee
Confidence 12333333333221 112478999999999999988777654 88888
Q ss_pred EEc
Q 008093 265 AIC 267 (578)
Q Consensus 265 lis 267 (578)
+++
T Consensus 270 ~lD 272 (399)
T KOG3847|consen 270 ALD 272 (399)
T ss_pred eee
Confidence 764
|
|
| >KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.08 E-value=8.6e-06 Score=87.68 Aligned_cols=168 Identities=18% Similarity=0.263 Sum_probs=107.9
Q ss_pred CCCcEEEEECCCC-CCCccHHHHHHHHHHHhCC--ceEEEEeCCC-CCCCCCCCCCCCCCCchHHHHHH----HHHHHHH
Q 008093 158 DTTPIAIVIPGLT-SDSAASYIRHLVFNTAKRG--WNVVVSNHRG-LGGVSITSDCFYNAGWTEDAREV----IGYLHHE 229 (578)
Q Consensus 158 ~~~PiVVllHGl~-G~s~~~yi~~l~~~l~~~G--y~Vvv~D~RG-~G~S~~~~~~~~~~~~~~Dl~~~----i~~l~~~ 229 (578)
...|++++.||.. -...+.++..+...+...| ..+..||++. +|+-... ...+-+..+ +..+..+
T Consensus 174 ~~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~igG~nI~-------h~ae~~vSf~r~kvlei~ge 246 (784)
T KOG3253|consen 174 PASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIGGANIK-------HAAEYSVSFDRYKVLEITGE 246 (784)
T ss_pred cCCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCCCcchH-------HHHHHHHHHhhhhhhhhhcc
Confidence 3568999999975 2233333345555555555 4567778775 4441111 011222222 2334456
Q ss_pred CCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccc
Q 008093 230 YPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSR 309 (578)
Q Consensus 230 ~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~ 309 (578)
|+..+|+++|.|||+.+++.....+.+. -|+++|+|+-|++.....
T Consensus 247 fpha~IiLvGrsmGAlVachVSpsnsdv-~V~~vVCigypl~~vdgp--------------------------------- 292 (784)
T KOG3253|consen 247 FPHAPIILVGRSMGALVACHVSPSNSDV-EVDAVVCIGYPLDTVDGP--------------------------------- 292 (784)
T ss_pred CCCCceEEEecccCceeeEEeccccCCc-eEEEEEEecccccCCCcc---------------------------------
Confidence 7899999999999998888776665542 388999887665442110
Q ss_pred cCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEE
Q 008093 310 LANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLA 389 (578)
Q Consensus 310 ~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~ 389 (578)
.|. ..+.+-.++.|+||+.|.+|..|+...++....+.-...+++
T Consensus 293 ------------------------rgi-----------rDE~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elh 337 (784)
T KOG3253|consen 293 ------------------------RGI-----------RDEALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELH 337 (784)
T ss_pred ------------------------cCC-----------cchhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhccceEE
Confidence 011 113345678999999999999999987765444445567899
Q ss_pred EeCCCCcccccc
Q 008093 390 TTWHGGHLAFFE 401 (578)
Q Consensus 390 ~~~~GGH~~~~e 401 (578)
++.+++|..-..
T Consensus 338 VI~~adhsmaip 349 (784)
T KOG3253|consen 338 VIGGADHSMAIP 349 (784)
T ss_pred EecCCCccccCC
Confidence 999999976554
|
|
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=98.02 E-value=0.00017 Score=88.94 Aligned_cols=98 Identities=16% Similarity=0.159 Sum_probs=67.8
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHH-HHHHHHHHCCCCcEEEE
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDARE-VIGYLHHEYPKAPLFAI 238 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~-~i~~l~~~~~~~~i~lv 238 (578)
.|.++++||++|+ ...| ..++..+. .+++|++++.+|+|.... ..+ ..+++.+ +++.+....+..+++++
T Consensus 1068 ~~~l~~lh~~~g~-~~~~-~~l~~~l~-~~~~v~~~~~~g~~~~~~---~~~---~l~~la~~~~~~i~~~~~~~p~~l~ 1138 (1296)
T PRK10252 1068 GPTLFCFHPASGF-AWQF-SVLSRYLD-PQWSIYGIQSPRPDGPMQ---TAT---SLDEVCEAHLATLLEQQPHGPYHLL 1138 (1296)
T ss_pred CCCeEEecCCCCc-hHHH-HHHHHhcC-CCCcEEEEECCCCCCCCC---CCC---CHHHHHHHHHHHHHhhCCCCCEEEE
Confidence 4568999999664 4455 67777764 479999999999986521 111 1232322 23334444456689999
Q ss_pred EEchHHHHHHHHHhhc---CCCCCccEEEEEcC
Q 008093 239 GTSIGANILVKYLGEE---GEKTPVAGAAAICS 268 (578)
Q Consensus 239 GhSmGG~ial~ya~~~---p~~~~V~~~Vlis~ 268 (578)
||||||.++..++.+. +. .+..++++++
T Consensus 1139 G~S~Gg~vA~e~A~~l~~~~~--~v~~l~l~~~ 1169 (1296)
T PRK10252 1139 GYSLGGTLAQGIAARLRARGE--EVAFLGLLDT 1169 (1296)
T ss_pred EechhhHHHHHHHHHHHHcCC--ceeEEEEecC
Confidence 9999999999998863 44 7888888765
|
|
| >KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.99 E-value=0.00021 Score=68.84 Aligned_cols=65 Identities=15% Similarity=0.207 Sum_probs=47.4
Q ss_pred cCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcCC
Q 008093 352 VGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSS 424 (578)
Q Consensus 352 l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~~ 424 (578)
...|++|.|-|.|+.|.++|...... +...-++. .++.-.|||+. |...-+.+.+.+|+..+...
T Consensus 159 ~~~i~~PSLHi~G~~D~iv~~~~s~~-L~~~~~~a-~vl~HpggH~V------P~~~~~~~~i~~fi~~~~~~ 223 (230)
T KOG2551|consen 159 KRPLSTPSLHIFGETDTIVPSERSEQ-LAESFKDA-TVLEHPGGHIV------PNKAKYKEKIADFIQSFLQE 223 (230)
T ss_pred ccCCCCCeeEEecccceeecchHHHH-HHHhcCCC-eEEecCCCccC------CCchHHHHHHHHHHHHHHHh
Confidence 45689999999999999999875543 34445555 44555689976 44445788999999887543
|
|
| >COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.96 E-value=3.9e-05 Score=74.99 Aligned_cols=109 Identities=18% Similarity=0.304 Sum_probs=76.9
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCC-----ceEEEEeCCCC----CCCCCC--CC---------CCCCCCchHHH
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRG-----WNVVVSNHRGL----GGVSIT--SD---------CFYNAGWTEDA 219 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~G-----y~Vvv~D~RG~----G~S~~~--~~---------~~~~~~~~~Dl 219 (578)
-| .|++||.+|...+ +..++..+...+ --++.+|--|- |.-+.. .| +.....+..-+
T Consensus 46 iP-TIfIhGsgG~asS--~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wl 122 (288)
T COG4814 46 IP-TIFIHGSGGTASS--LNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWL 122 (288)
T ss_pred cc-eEEEecCCCChhH--HHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHH
Confidence 35 5699999765544 477888887654 23555666652 111100 01 11112345678
Q ss_pred HHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCC---CCccEEEEEcCCcc
Q 008093 220 REVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEK---TPVAGAAAICSPWD 271 (578)
Q Consensus 220 ~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~---~~V~~~Vlis~p~d 271 (578)
..++.+++++|.-.++-+|||||||.-+..|+..++.+ +++...|.++.|++
T Consensus 123 k~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 123 KKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 88999999999999999999999999999999988754 36999999999987
|
|
| >PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae | Back alignment and domain information |
|---|
Probab=97.91 E-value=3.9e-05 Score=76.65 Aligned_cols=115 Identities=14% Similarity=0.083 Sum_probs=69.7
Q ss_pred CCCCcEEEEECCCCCCCccHHHHHHHHHHHhCC----ceEEEEeCCCCCCC--CCCC-----CCCCCCCc----hHHH-H
Q 008093 157 DDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRG----WNVVVSNHRGLGGV--SITS-----DCFYNAGW----TEDA-R 220 (578)
Q Consensus 157 ~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~G----y~Vvv~D~RG~G~S--~~~~-----~~~~~~~~----~~Dl-~ 220 (578)
...-|+|+++||..+.....-+......+...| .-+|+++.-+.+.. .... ......+. .+.+ .
T Consensus 21 ~~~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 100 (251)
T PF00756_consen 21 SKPYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRADDSGGGDAYETFLTE 100 (251)
T ss_dssp TTTEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBCTSTTTHHHHHHHHHT
T ss_pred CCCCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccccccCCCCcccceehhc
Confidence 356799999999721111111223333334433 45666776555411 1000 01111111 1223 3
Q ss_pred HHHHHHHHHCCCC--cEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchh
Q 008093 221 EVIGYLHHEYPKA--PLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL 273 (578)
Q Consensus 221 ~~i~~l~~~~~~~--~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~ 273 (578)
+++.++.++++.. +..++|+||||..++.++.++|+ .+.+++++|+.++..
T Consensus 101 el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd--~F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 101 ELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPD--LFGAVIAFSGALDPS 153 (251)
T ss_dssp HHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTT--TESEEEEESEESETT
T ss_pred cchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCcc--ccccccccCcccccc
Confidence 6778888888522 27999999999999999999999 899999999766553
|
; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D .... |
| >PRK04940 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00039 Score=65.74 Aligned_cols=35 Identities=9% Similarity=-0.118 Sum_probs=29.4
Q ss_pred CcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcch
Q 008093 233 APLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (578)
Q Consensus 233 ~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~ 272 (578)
.++.+||.||||+-|..++.+++- .+|+|+|....
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g~-----~aVLiNPAv~P 94 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCGI-----RQVIFNPNLFP 94 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHCC-----CEEEECCCCCh
Confidence 479999999999999999988865 57889887654
|
|
| >COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=97.88 E-value=7.2e-05 Score=75.01 Aligned_cols=102 Identities=16% Similarity=0.132 Sum_probs=76.4
Q ss_pred cEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHH-HHHHHHHHHHHCCCCcEEEEE
Q 008093 161 PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTED-AREVIGYLHHEYPKAPLFAIG 239 (578)
Q Consensus 161 PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~D-l~~~i~~l~~~~~~~~i~lvG 239 (578)
|+++++||..| +...| ..++..+... ..|+.++.||.|.-... ....+| +...++.|++..|..|++++|
T Consensus 1 ~pLF~fhp~~G-~~~~~-~~L~~~l~~~-~~v~~l~a~g~~~~~~~------~~~l~~~a~~yv~~Ir~~QP~GPy~L~G 71 (257)
T COG3319 1 PPLFCFHPAGG-SVLAY-APLAAALGPL-LPVYGLQAPGYGAGEQP------FASLDDMAAAYVAAIRRVQPEGPYVLLG 71 (257)
T ss_pred CCEEEEcCCCC-cHHHH-HHHHHHhccC-ceeeccccCcccccccc------cCCHHHHHHHHHHHHHHhCCCCCEEEEe
Confidence 45899999855 55556 7788887765 89999999999852211 122344 456788888888999999999
Q ss_pred EchHHHHHHHHHhhcCCC-CCccEEEEEcCCcc
Q 008093 240 TSIGANILVKYLGEEGEK-TPVAGAAAICSPWD 271 (578)
Q Consensus 240 hSmGG~ial~ya~~~p~~-~~V~~~Vlis~p~d 271 (578)
+|+||+++...|.+.... ..|..+++++++..
T Consensus 72 ~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 72 WSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred eccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 999999999888653221 16889999988766
|
|
| >KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00019 Score=68.78 Aligned_cols=108 Identities=18% Similarity=0.208 Sum_probs=81.0
Q ss_pred CCcEEEEECCCCCCC-ccHHHHHHHHHHHhCCceEEEEeCCC----CCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCC
Q 008093 159 TTPIAIVIPGLTSDS-AASYIRHLVFNTAKRGWNVVVSNHRG----LGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKA 233 (578)
Q Consensus 159 ~~PiVVllHGl~G~s-~~~yi~~l~~~l~~~Gy~Vvv~D~RG----~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~ 233 (578)
.+-.|||+-|++.+- ...|...++..+.+.+|..+-+-.|. +|.+... ...+|+..+++|+...--.+
T Consensus 35 ~~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~slk-------~D~edl~~l~~Hi~~~~fSt 107 (299)
T KOG4840|consen 35 ESVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTFSLK-------DDVEDLKCLLEHIQLCGFST 107 (299)
T ss_pred eEEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeecccccccccccccc-------ccHHHHHHHHHHhhccCccc
Confidence 345689999995443 34788899999999999999998764 4444332 45689999999987654456
Q ss_pred cEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchh
Q 008093 234 PLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL 273 (578)
Q Consensus 234 ~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~ 273 (578)
.++++|||-|..=.+.|+...-....|.++|+.+|..|.+
T Consensus 108 ~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 108 DVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred ceEEEecCccchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence 8999999999999999994433323688888888776654
|
|
| >PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00069 Score=70.28 Aligned_cols=111 Identities=14% Similarity=0.219 Sum_probs=73.4
Q ss_pred CCCcEEEEECCCCCCCc-cHHHHHHHHHHHhCCceEEEEeCCC--CCCCCCCC-----------CCCCC-----------
Q 008093 158 DTTPIAIVIPGLTSDSA-ASYIRHLVFNTAKRGWNVVVSNHRG--LGGVSITS-----------DCFYN----------- 212 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~-~~yi~~l~~~l~~~Gy~Vvv~D~RG--~G~S~~~~-----------~~~~~----------- 212 (578)
.....||++||.+.+.. ...+..+-..|.+.||.++.+..+. ....+... .....
T Consensus 85 ~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 164 (310)
T PF12048_consen 85 KPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQ 164 (310)
T ss_pred CCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCcccccc
Confidence 55678999999954433 2456778888999999999999887 11111100 00000
Q ss_pred ---------CCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 213 ---------AGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 213 ---------~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
.....-+.+++.++.. ++..+++++||+.|+..+++|+.+.+.. .++++|+|++.+
T Consensus 165 ~~~~~~~~~~~~~ari~Aa~~~~~~-~~~~~ivlIg~G~gA~~~~~~la~~~~~-~~daLV~I~a~~ 229 (310)
T PF12048_consen 165 EAEAREAYEERLFARIEAAIAFAQQ-QGGKNIVLIGHGTGAGWAARYLAEKPPP-MPDALVLINAYW 229 (310)
T ss_pred HhHHhHHHHHHHHHHHHHHHHHHHh-cCCceEEEEEeChhHHHHHHHHhcCCCc-ccCeEEEEeCCC
Confidence 0011233444444443 4555699999999999999999998762 488999997654
|
This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes. |
| >PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases | Back alignment and domain information |
|---|
Probab=97.82 E-value=4.5e-05 Score=75.02 Aligned_cols=40 Identities=23% Similarity=0.162 Sum_probs=26.3
Q ss_pred CcEEEEEEchHHHHHHHHHhhcCCC----------CCccEEEEEcCCcch
Q 008093 233 APLFAIGTSIGANILVKYLGEEGEK----------TPVAGAAAICSPWDL 272 (578)
Q Consensus 233 ~~i~lvGhSmGG~ial~ya~~~p~~----------~~V~~~Vlis~p~d~ 272 (578)
.+|.+|||||||.++-.++....+. ......+.+++|.-.
T Consensus 78 ~~IsfIgHSLGGli~r~al~~~~~~~~~~~~~~~~~~~~~fitlatPH~G 127 (217)
T PF05057_consen 78 RKISFIGHSLGGLIARYALGLLHDKPQYFPGFFQKIKPHNFITLATPHLG 127 (217)
T ss_pred ccceEEEecccHHHHHHHHHHhhhccccccccccceeeeeEEEeCCCCCC
Confidence 5899999999999986555432211 034456677887643
|
|
| >KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.81 E-value=9.1e-05 Score=75.97 Aligned_cols=117 Identities=19% Similarity=0.218 Sum_probs=87.7
Q ss_pred CCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhC---C------ceEEEEeCCC
Q 008093 129 DGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKR---G------WNVVVSNHRG 199 (578)
Q Consensus 129 DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~---G------y~Vvv~D~RG 199 (578)
.|-.|+.--..+++.+ ......| ++++|||.|+-.+-| .++..|.+. | |.|+++.++|
T Consensus 132 eGL~iHFlhvk~p~~k----------~~k~v~P-lLl~HGwPGsv~EFy--kfIPlLT~p~~hg~~~d~~FEVI~PSlPG 198 (469)
T KOG2565|consen 132 EGLKIHFLHVKPPQKK----------KKKKVKP-LLLLHGWPGSVREFY--KFIPLLTDPKRHGNESDYAFEVIAPSLPG 198 (469)
T ss_pred cceeEEEEEecCCccc----------cCCcccc-eEEecCCCchHHHHH--hhhhhhcCccccCCccceeEEEeccCCCC
Confidence 5666766555554321 1123445 789999999877766 577777653 3 8999999999
Q ss_pred CCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEE
Q 008093 200 LGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGA 263 (578)
Q Consensus 200 ~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~ 263 (578)
+|-|+.++..-++. ..++.++.-+.-+.+-.+.++-|-.+|+.|+..++.-+|+ +|.|.
T Consensus 199 ygwSd~~sk~GFn~---~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPe--nV~Gl 257 (469)
T KOG2565|consen 199 YGWSDAPSKTGFNA---AATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPE--NVLGL 257 (469)
T ss_pred cccCcCCccCCccH---HHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcch--hhhHh
Confidence 99999887765553 4566777777778888899999999999999999999999 56553
|
|
| >cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00013 Score=80.66 Aligned_cols=127 Identities=17% Similarity=0.124 Sum_probs=78.0
Q ss_pred CcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCC---CCCccHHHHHHHHHHHh-C-CceEEEEeCC-C-CCC
Q 008093 130 GGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLT---SDSAASYIRHLVFNTAK-R-GWNVVVSNHR-G-LGG 202 (578)
Q Consensus 130 G~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~---G~s~~~yi~~l~~~l~~-~-Gy~Vvv~D~R-G-~G~ 202 (578)
...+.++.+.|... ......|+||++||-+ |+... + ....+.. . |+.|+.+||| | .|.
T Consensus 76 Edcl~l~i~~p~~~-----------~~~~~~pv~v~ihGG~~~~g~~~~-~---~~~~~~~~~~~~~vv~~~yRlg~~g~ 140 (493)
T cd00312 76 EDCLYLNVYTPKNT-----------KPGNSLPVMVWIHGGGFMFGSGSL-Y---PGDGLAREGDNVIVVSINYRLGVLGF 140 (493)
T ss_pred CcCCeEEEEeCCCC-----------CCCCCCCEEEEEcCCccccCCCCC-C---ChHHHHhcCCCEEEEEeccccccccc
Confidence 34567777766431 1135679999999931 22222 1 1223333 3 3999999999 5 232
Q ss_pred CCCCCCCCCCCCchHHHHHHHHHHHHH---C--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcc
Q 008093 203 VSITSDCFYNAGWTEDAREVIGYLHHE---Y--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (578)
Q Consensus 203 S~~~~~~~~~~~~~~Dl~~~i~~l~~~---~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d 271 (578)
-...........-..|..++++++++. + ...+|.++|+|.||.++..++........++++|+.+++..
T Consensus 141 ~~~~~~~~~~n~g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 141 LSTGDIELPGNYGLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred ccCCCCCCCcchhHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 211111111111247999999999875 2 34589999999999999887766433236888888887543
|
) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. |
| >smart00824 PKS_TE Thioesterase | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.0019 Score=61.60 Aligned_cols=89 Identities=12% Similarity=0.063 Sum_probs=58.4
Q ss_pred CccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHh
Q 008093 173 SAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLG 252 (578)
Q Consensus 173 s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~ 252 (578)
+...| ..+...+.. ++.|++++.+|++.+..... .....+...++.+....+..+++++||||||.++...+.
T Consensus 11 ~~~~~-~~~~~~l~~-~~~v~~~~~~g~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a~~~a~ 83 (212)
T smart00824 11 GPHEY-ARLAAALRG-RRDVSALPLPGFGPGEPLPA-----SADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLAHAVAA 83 (212)
T ss_pred cHHHH-HHHHHhcCC-CccEEEecCCCCCCCCCCCC-----CHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHHHHHHH
Confidence 33345 567777654 68999999999986543211 112223334455555566778999999999999988877
Q ss_pred hcCC-CCCccEEEEEcC
Q 008093 253 EEGE-KTPVAGAAAICS 268 (578)
Q Consensus 253 ~~p~-~~~V~~~Vlis~ 268 (578)
.... ...+.+++++.+
T Consensus 84 ~l~~~~~~~~~l~~~~~ 100 (212)
T smart00824 84 RLEARGIPPAAVVLLDT 100 (212)
T ss_pred HHHhCCCCCcEEEEEcc
Confidence 5322 115778877764
|
Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa. |
| >KOG1551 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00054 Score=67.33 Aligned_cols=248 Identities=16% Similarity=0.186 Sum_probs=123.9
Q ss_pred CCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHH--HHHHHHHhCCceEEEEeCCCCCCCCCC
Q 008093 129 DGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIR--HLVFNTAKRGWNVVVSNHRGLGGVSIT 206 (578)
Q Consensus 129 DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~--~l~~~l~~~Gy~Vvv~D~RG~G~S~~~ 206 (578)
.-++....|+.|+. ..|+-+.+-|- |+.. |.+ -+...+.++|...+++..+=+|.....
T Consensus 98 ~~~~A~~~~liPQK----------------~~~KOG~~a~t-gdh~--y~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~ 158 (371)
T KOG1551|consen 98 ESRTARVAWLIPQK----------------MADLCLSWALT-GDHV--YTRRLVLSKPINKREIATMVLEKPFYGQRVPE 158 (371)
T ss_pred cccceeeeeecccC----------------cCCeeEEEeec-CCce--eEeeeeecCchhhhcchheeeecccccccCCH
Confidence 34667788988743 34555555554 4332 222 356677888999999999989876432
Q ss_pred CCCCCCCCchHHH----HHHHHHHHHHC------CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc-chhhh
Q 008093 207 SDCFYNAGWTEDA----REVIGYLHHEY------PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW-DLLIG 275 (578)
Q Consensus 207 ~~~~~~~~~~~Dl----~~~i~~l~~~~------~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~-d~~~~ 275 (578)
......-....|+ ++.|+...+.+ +-.++.++|-||||.++-.....++. +|+-+=++++.- ....+
T Consensus 159 ~q~~~~Le~vtDlf~mG~A~I~E~~~lf~Ws~~~g~g~~~~~g~Smgg~~a~~vgS~~q~--Pva~~p~l~~~~asvs~t 236 (371)
T KOG1551|consen 159 EQIIHMLEYVTDLFKMGRATIQEFVKLFTWSSADGLGNLNLVGRSMGGDIANQVGSLHQK--PVATAPCLNSSKASVSAT 236 (371)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHhcccccccCcccceeeeeecccHHHHhhcccCCC--Cccccccccccccchhhh
Confidence 1100000111233 12222222222 34689999999999999877766665 444333232211 01111
Q ss_pred hHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHh---ccCCHHHHHhhhhhccCCCCCHHHHHHhC-Ccccc
Q 008093 276 DRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIK---KSRSIRDFDSHATCLVGKFETVDTYYRNC-SSSTY 351 (578)
Q Consensus 276 ~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~---~~~s~~efd~~~~~~~~g~~~~~~yy~~~-s~~~~ 351 (578)
+..+. ..+.+ +++.... ..+.... .+++.....+. ++ ..+-+....+.+.. +....
T Consensus 237 eg~l~-----~~~s~-----~~~~~~~--------t~~~~~~~r~p~Q~~~~~~~~-~s-rn~~~E~~~~Mr~vmd~~T~ 296 (371)
T KOG1551|consen 237 EGLLL-----QDTSK-----MKRFNQT--------TNKSGYTSRNPAQSYHLLSKE-QS-RNSRKESLIFMRGVMDECTH 296 (371)
T ss_pred hhhhh-----hhhHH-----HHhhccC--------cchhhhhhhCchhhHHHHHHH-hh-hcchHHHHHHHHHHHHhhch
Confidence 11110 01111 1111000 0000000 00000000000 00 01111111111111 11123
Q ss_pred cCCCccc-----eEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhc
Q 008093 352 VGNVSIP-----LLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 352 l~~I~vP-----vLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~ 422 (578)
+.+..+| +.++.+++|..+|....+. ..+.-|++++...+ |||+.-+- -..+.|.++|.|-|+++.
T Consensus 297 v~~fp~Pvdpsl~ivv~A~~D~Yipr~gv~~-lQ~~WPg~eVr~~e-gGHVsayl---~k~dlfRR~I~d~L~R~~ 367 (371)
T KOG1551|consen 297 VANFPVPVDPSLIIVVQAKEDAYIPRTGVRS-LQEIWPGCEVRYLE-GGHVSAYL---FKQDLFRRAIVDGLDRLD 367 (371)
T ss_pred hhcCCCCCCCCeEEEEEecCCccccccCcHH-HHHhCCCCEEEEee-cCceeeee---hhchHHHHHHHHHHHhhh
Confidence 3444444 6788999999999977665 55677889888888 89987554 133468899999988764
|
|
| >KOG2112 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.0011 Score=63.42 Aligned_cols=57 Identities=12% Similarity=0.027 Sum_probs=40.6
Q ss_pred ccceEEEEeCCCCCCCCCCcc---hHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHh
Q 008093 356 SIPLLCISSLDDPVCTVEAIP---WDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 356 ~vPvLiI~g~dDpivp~~~~~---~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
.+|++..||++|++||..-.. .........+++..+++-+|.-.-+ -.+.+..|+.+
T Consensus 144 ~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~~~~--------e~~~~~~~~~~ 203 (206)
T KOG2112|consen 144 YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHSTSPQ--------ELDDLKSWIKT 203 (206)
T ss_pred cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCccccccHH--------HHHHHHHHHHH
Confidence 689999999999999987322 1233334448999999999966554 23566777765
|
|
| >KOG3101 consensus Esterase D [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00024 Score=67.60 Aligned_cols=129 Identities=20% Similarity=0.366 Sum_probs=73.0
Q ss_pred cEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHH--HHHHHHHhCCceEEEEeC--CCC---CCC
Q 008093 131 GMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIR--HLVFNTAKRGWNVVVSNH--RGL---GGV 203 (578)
Q Consensus 131 ~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~--~l~~~l~~~Gy~Vvv~D~--RG~---G~S 203 (578)
..+....+.|++. +....-|++.++-|++. ..+.++. .+...+.++|+.||.+|- ||. |..
T Consensus 26 c~Mtf~vylPp~a-----------~~~k~~P~lf~LSGLTC-T~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~ 93 (283)
T KOG3101|consen 26 CSMTFGVYLPPDA-----------PRGKRCPVLFYLSGLTC-THENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDD 93 (283)
T ss_pred cceEEEEecCCCc-----------ccCCcCceEEEecCCcc-cchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCc
Confidence 4456666766553 22345799999999975 4555543 234456678999999984 664 222
Q ss_pred CCC----CCCCCC----CCchHHHHHHHHHHHHHC-----------CCCcEEEEEEchHHHHHHHHHhhcCCCC-CccEE
Q 008093 204 SIT----SDCFYN----AGWTEDAREVIGYLHHEY-----------PKAPLFAIGTSIGANILVKYLGEEGEKT-PVAGA 263 (578)
Q Consensus 204 ~~~----~~~~~~----~~~~~Dl~~~i~~l~~~~-----------~~~~i~lvGhSmGG~ial~ya~~~p~~~-~V~~~ 263 (578)
+.- ...+|. .-|.. --.+.+|+.++. ...++.+.||||||.=++..+.+.+..- .|.+.
T Consensus 94 eswDFG~GAGFYvnAt~epw~~-~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAF 172 (283)
T KOG3101|consen 94 ESWDFGQGAGFYVNATQEPWAK-HYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAF 172 (283)
T ss_pred ccccccCCceeEEecccchHhh-hhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceecc
Confidence 100 001111 01111 011223333222 2346999999999988876666655521 36677
Q ss_pred EEEcCCcch
Q 008093 264 AAICSPWDL 272 (578)
Q Consensus 264 Vlis~p~d~ 272 (578)
+-||.|.+.
T Consensus 173 API~NP~~c 181 (283)
T KOG3101|consen 173 APICNPINC 181 (283)
T ss_pred ccccCcccC
Confidence 777777644
|
|
| >COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00029 Score=76.60 Aligned_cols=157 Identities=18% Similarity=0.067 Sum_probs=97.2
Q ss_pred CCchhHHHhhhhhhcC-CCCCCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCcc-H
Q 008093 99 LSSPHIQTAFLHFFGR-PPCFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAA-S 176 (578)
Q Consensus 99 l~~ghlQT~~~~~~~~-~~~~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~-~ 176 (578)
+...-++++-....+. ...+.-+...-+..||..|.+=... .+. ..+ +.|++|.--|-.+-+.. .
T Consensus 372 ~~~~eLe~ik~~p~~FDa~~~~veQ~~atSkDGT~IPYFiv~-K~~-----------~~d-~~pTll~aYGGF~vsltP~ 438 (648)
T COG1505 372 LFGGELEVIREQPVQFDADNYEVEQFFATSKDGTRIPYFIVR-KGA-----------KKD-ENPTLLYAYGGFNISLTPR 438 (648)
T ss_pred cCCceehhhhhccCCcCccCceEEEEEEEcCCCccccEEEEe-cCC-----------cCC-CCceEEEeccccccccCCc
Confidence 3444466653222211 1223334445566799999876654 221 113 67876555543233333 3
Q ss_pred HHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCC-------CchHHHHHHHHHHHHHCC--CCcEEEEEEchHHHHH
Q 008093 177 YIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNA-------GWTEDAREVIGYLHHEYP--KAPLFAIGTSIGANIL 247 (578)
Q Consensus 177 yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~-------~~~~Dl~~~i~~l~~~~~--~~~i~lvGhSmGG~ia 247 (578)
| ........++|..-+..|.||-|.-.. ....+ .-.+|..++.+.+.++.- .+++.+.|-|-||.++
T Consensus 439 f-s~~~~~WLerGg~~v~ANIRGGGEfGp---~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLv 514 (648)
T COG1505 439 F-SGSRKLWLERGGVFVLANIRGGGEFGP---EWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLV 514 (648)
T ss_pred c-chhhHHHHhcCCeEEEEecccCCccCH---HHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEE
Confidence 4 334477788999999999999876421 11111 123899999999987742 3479999999999999
Q ss_pred HHHHhhcCCCCCccEEEEEcCCcchhh
Q 008093 248 VKYLGEEGEKTPVAGAAAICSPWDLLI 274 (578)
Q Consensus 248 l~ya~~~p~~~~V~~~Vlis~p~d~~~ 274 (578)
...+.+.|+ .+.++|+-.|-.|+..
T Consensus 515 g~alTQrPe--lfgA~v~evPllDMlR 539 (648)
T COG1505 515 GAALTQRPE--LFGAAVCEVPLLDMLR 539 (648)
T ss_pred EeeeccChh--hhCceeeccchhhhhh
Confidence 988889998 5656555445556543
|
|
| >PTZ00472 serine carboxypeptidase (CBP1); Provisional | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.0017 Score=71.09 Aligned_cols=112 Identities=15% Similarity=0.103 Sum_probs=71.9
Q ss_pred CCCCcEEEEECCCCCCCccHHHHHHHH-----------HHH------hCCceEEEEeC-CCCCCCCCCCCCCCC--CCch
Q 008093 157 DDTTPIAIVIPGLTSDSAASYIRHLVF-----------NTA------KRGWNVVVSNH-RGLGGVSITSDCFYN--AGWT 216 (578)
Q Consensus 157 ~~~~PiVVllHGl~G~s~~~yi~~l~~-----------~l~------~~Gy~Vvv~D~-RG~G~S~~~~~~~~~--~~~~ 216 (578)
..+.|+||+++|-.|+|... -.+.+ .+. .+-.+++.+|. +|+|.|......... ....
T Consensus 74 ~~~~Pl~lwlnGGPG~ss~~--G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~iDqP~G~G~S~~~~~~~~~~~~~~a 151 (462)
T PTZ00472 74 NPEAPVLLWMTGGPGCSSMF--ALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYVDQPAGVGFSYADKADYDHNESEVS 151 (462)
T ss_pred CCCCCEEEEECCCCcHHHHH--hhhccCCCeEEeCCCCceeECCcccccccCeEEEeCCCCcCcccCCCCCCCCChHHHH
Confidence 35679999999998877531 11110 010 11257888896 699988654332111 2345
Q ss_pred HHHHHHHHHHHHHCCC---CcEEEEEEchHHHHHHHHHhhcC--------CCCCccEEEEEcCCc
Q 008093 217 EDAREVIGYLHHEYPK---APLFAIGTSIGANILVKYLGEEG--------EKTPVAGAAAICSPW 270 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~~---~~i~lvGhSmGG~ial~ya~~~p--------~~~~V~~~Vlis~p~ 270 (578)
+|+.++++...+++|. .+++++|+|+||..+..+|.+-- ....++|+++-++-.
T Consensus 152 ~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~ 216 (462)
T PTZ00472 152 EDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLT 216 (462)
T ss_pred HHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEecccc
Confidence 7888888877777764 79999999999998877765421 123577877655433
|
|
| >COG4782 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00057 Score=70.51 Aligned_cols=114 Identities=12% Similarity=0.155 Sum_probs=75.5
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCc--eEEEEeCCCCCCCCCC-CCCCCCCCchHHHHHHHHHHHHHCCCCc
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGW--NVVVSNHRGLGGVSIT-SDCFYNAGWTEDAREVIGYLHHEYPKAP 234 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy--~Vvv~D~RG~G~S~~~-~~~~~~~~~~~Dl~~~i~~l~~~~~~~~ 234 (578)
..+-++||+||+.. +-+.-...+++-..+.|+ .+++|-++..|..-.- .++..+.....+++.++.+|..+.+..+
T Consensus 114 ~~k~vlvFvHGfNn-tf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~ 192 (377)
T COG4782 114 SAKTVLVFVHGFNN-TFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKR 192 (377)
T ss_pred CCCeEEEEEcccCC-chhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCce
Confidence 56678999999954 433223456666666664 6888999987763211 1111111223689999999999888889
Q ss_pred EEEEEEchHHHHHHHHHhhcC---C---CCCccEEEEEcCCcch
Q 008093 235 LFAIGTSIGANILVKYLGEEG---E---KTPVAGAAAICSPWDL 272 (578)
Q Consensus 235 i~lvGhSmGG~ial~ya~~~p---~---~~~V~~~Vlis~p~d~ 272 (578)
|++++||||..+++..+.+.. . ...++-+|+-++-.|.
T Consensus 193 I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~ 236 (377)
T COG4782 193 IYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDV 236 (377)
T ss_pred EEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCCh
Confidence 999999999999998775431 1 1245566666555544
|
|
| >PRK10439 enterobactin/ferric enterobactin esterase; Provisional | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.0027 Score=68.46 Aligned_cols=107 Identities=14% Similarity=0.094 Sum_probs=67.1
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCc----eEEEEeCCCCCCCCCCCCCCC-CCCchHHH-HHHHHHHHHHCC
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGW----NVVVSNHRGLGGVSITSDCFY-NAGWTEDA-REVIGYLHHEYP 231 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy----~Vvv~D~RG~G~S~~~~~~~~-~~~~~~Dl-~~~i~~l~~~~~ 231 (578)
...|+|+++||-.- ....-+...+..+.+.|. .+|.+|..+.. . ...... ...+.+.+ .+++-++.++|+
T Consensus 207 ~~~PvlyllDG~~w-~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~--~-R~~el~~~~~f~~~l~~eLlP~I~~~y~ 282 (411)
T PRK10439 207 EERPLAILLDGQFW-AESMPVWPALDSLTHRGQLPPAVYLLIDAIDTT--H-RSQELPCNADFWLAVQQELLPQVRAIAP 282 (411)
T ss_pred CCCCEEEEEECHHh-hhcCCHHHHHHHHHHcCCCCceEEEEECCCCcc--c-ccccCCchHHHHHHHHHHHHHHHHHhCC
Confidence 46799999999531 111113445566666663 35666652211 1 101111 11222333 466677777764
Q ss_pred ----CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 232 ----KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 232 ----~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
..+.+++|+||||..++..+..+|+ .+.+++++++.+
T Consensus 283 ~~~d~~~~~IaG~S~GGl~AL~~al~~Pd--~Fg~v~s~Sgs~ 323 (411)
T PRK10439 283 FSDDADRTVVAGQSFGGLAALYAGLHWPE--RFGCVLSQSGSF 323 (411)
T ss_pred CCCCccceEEEEEChHHHHHHHHHHhCcc--cccEEEEeccce
Confidence 3468999999999999999999999 899999998653
|
|
| >KOG3975 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0024 Score=62.59 Aligned_cols=110 Identities=16% Similarity=0.205 Sum_probs=80.1
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhC-C--ceEEEEeCCCCCCCCCCCCCCCC------CCchHHHHHHHHHHHH
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKR-G--WNVVVSNHRGLGGVSITSDCFYN------AGWTEDAREVIGYLHH 228 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~-G--y~Vvv~D~RG~G~S~~~~~~~~~------~~~~~Dl~~~i~~l~~ 228 (578)
.+++++++++|..|... .| ..++..+... + ..++.+-+-||..-+.+.....+ .+..+.+..-++++++
T Consensus 27 ~~~~li~~IpGNPG~~g-FY-~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~ 104 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLG-FY-TEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKE 104 (301)
T ss_pred CCceEEEEecCCCCchh-HH-HHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHH
Confidence 57899999999987544 35 7788777653 2 56999999998876522111111 2334677788888887
Q ss_pred HCC-CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCC
Q 008093 229 EYP-KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSP 269 (578)
Q Consensus 229 ~~~-~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p 269 (578)
-.| +.+++++|||.|+++.++.+-......+|..++++-|.
T Consensus 105 ~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPT 146 (301)
T KOG3975|consen 105 YVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPT 146 (301)
T ss_pred hCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecch
Confidence 766 56899999999999999999866555578888888664
|
|
| >PLN02606 palmitoyl-protein thioesterase | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.0087 Score=61.04 Aligned_cols=106 Identities=11% Similarity=0.102 Sum_probs=64.6
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHh-CCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC-CCCcEE
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAK-RGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY-PKAPLF 236 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~-~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~-~~~~i~ 236 (578)
..| ||+.||++.+....-+..+.+.+.+ .|+-+..+- .|-+. ...+.....+.+..+.+.++..- -..-+.
T Consensus 26 ~~P-vViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~-----~~s~~~~~~~Qv~~vce~l~~~~~L~~G~n 98 (306)
T PLN02606 26 SVP-FVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGV-----QDSLFMPLRQQASIACEKIKQMKELSEGYN 98 (306)
T ss_pred CCC-EEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCc-----ccccccCHHHHHHHHHHHHhcchhhcCceE
Confidence 345 7799999522222235777777753 365444443 22111 11121222355566666555411 012499
Q ss_pred EEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcc
Q 008093 237 AIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (578)
Q Consensus 237 lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d 271 (578)
++|+|.||.++-.++.+.+...+|+-+|.+++|..
T Consensus 99 aIGfSQGglflRa~ierc~~~p~V~nlISlggph~ 133 (306)
T PLN02606 99 IVAESQGNLVARGLIEFCDNAPPVINYVSLGGPHA 133 (306)
T ss_pred EEEEcchhHHHHHHHHHCCCCCCcceEEEecCCcC
Confidence 99999999999999988866457999999998753
|
|
| >PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.0013 Score=71.64 Aligned_cols=112 Identities=22% Similarity=0.257 Sum_probs=70.8
Q ss_pred CCCcEEEEECCCCCCCccHHH-HHHHHHH-HhCCceEEEEeCCCCCCCCCCCCCCC------C-CCchHHHHHHHHHHHH
Q 008093 158 DTTPIAIVIPGLTSDSAASYI-RHLVFNT-AKRGWNVVVSNHRGLGGVSITSDCFY------N-AGWTEDAREVIGYLHH 228 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi-~~l~~~l-~~~Gy~Vvv~D~RG~G~S~~~~~~~~------~-~~~~~Dl~~~i~~l~~ 228 (578)
++.|++|++-|= |.....++ ..+...+ .+.|=-++++.||-+|.|.+...... + .....|+..++++++.
T Consensus 27 ~~gpifl~~ggE-~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~ 105 (434)
T PF05577_consen 27 PGGPIFLYIGGE-GPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKK 105 (434)
T ss_dssp TTSEEEEEE--S-S-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCC-CccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHH
Confidence 347877777664 33332232 2233333 34577899999999999975432111 1 1224799999999997
Q ss_pred HC---CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcch
Q 008093 229 EY---PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (578)
Q Consensus 229 ~~---~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~ 272 (578)
++ ++.|++++|-|+||+++.-+-.++|+ .+.|+++-++|...
T Consensus 106 ~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~--~~~ga~ASSapv~a 150 (434)
T PF05577_consen 106 KYNTAPNSPWIVFGGSYGGALAAWFRLKYPH--LFDGAWASSAPVQA 150 (434)
T ss_dssp HTTTGCC--EEEEEETHHHHHHHHHHHH-TT--T-SEEEEET--CCH
T ss_pred hhcCCCCCCEEEECCcchhHHHHHHHhhCCC--eeEEEEeccceeee
Confidence 76 45699999999999999999999999 89999999988643
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C. |
| >COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.00057 Score=71.79 Aligned_cols=104 Identities=21% Similarity=0.227 Sum_probs=73.7
Q ss_pred EEEEECCCCCCCccHHHHHHHHHHHhCCce---EEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEE
Q 008093 162 IAIVIPGLTSDSAASYIRHLVFNTAKRGWN---VVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAI 238 (578)
Q Consensus 162 iVVllHGl~G~s~~~yi~~l~~~l~~~Gy~---Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lv 238 (578)
.++++||+ +.....+ ..+...+...||. ++.+++.+-.. .. + .....+.+...++.+....+..++.++
T Consensus 61 pivlVhG~-~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~--~---~~~~~~ql~~~V~~~l~~~ga~~v~Li 132 (336)
T COG1075 61 PIVLVHGL-GGGYGNF-LPLDYRLAILGWLTNGVYAFELSGGDG-TY--S---LAVRGEQLFAYVDEVLAKTGAKKVNLI 132 (336)
T ss_pred eEEEEccC-cCCcchh-hhhhhhhcchHHHhcccccccccccCC-Cc--c---ccccHHHHHHHHHHHHhhcCCCceEEE
Confidence 48899998 4444444 5666677777887 88888876511 11 1 112234555666666666667899999
Q ss_pred EEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchh
Q 008093 239 GTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL 273 (578)
Q Consensus 239 GhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~ 273 (578)
||||||.++..|++..+....|+.++.+++|-...
T Consensus 133 gHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~Gt 167 (336)
T COG1075 133 GHSMGGLDSRYYLGVLGGANRVASVVTLGTPHHGT 167 (336)
T ss_pred eecccchhhHHHHhhcCccceEEEEEEeccCCCCc
Confidence 99999999998888888544899999999886543
|
|
| >COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.00081 Score=67.84 Aligned_cols=73 Identities=18% Similarity=0.140 Sum_probs=47.9
Q ss_pred cccccCCCc-cceEEEEeCCCCCCCCCCcchHHHhcCC-CEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 348 SSTYVGNVS-IPLLCISSLDDPVCTVEAIPWDECRANK-NVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 348 ~~~~l~~I~-vPvLiI~g~dDpivp~~~~~~~~~~~~~-~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
....+.++. +|+|+++|.+|.++|............. +.....+++++|...... .+......+.+.+|+.+.
T Consensus 223 ~~~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~-~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 223 PFDDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDN-PPAVEQALDKLAEFLERH 297 (299)
T ss_pred chhhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCc-cHHHHHHHHHHHHHHHHh
Confidence 344555565 8999999999999998754433222233 677888888999876531 011113567788888764
|
|
| >PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0011 Score=73.59 Aligned_cols=125 Identities=18% Similarity=0.111 Sum_probs=73.6
Q ss_pred cEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCC--C-CCC-ccHHHHHHHHHHHhCCceEEEEeCCC--CCCCC
Q 008093 131 GMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGL--T-SDS-AASYIRHLVFNTAKRGWNVVVSNHRG--LGGVS 204 (578)
Q Consensus 131 ~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl--~-G~s-~~~yi~~l~~~l~~~Gy~Vvv~D~RG--~G~S~ 204 (578)
.-+.|+.+.|.... .....|++|++||- . |+. ...| .-...+.+++.-||.+|||= +|--.
T Consensus 107 DCL~LnI~~P~~~~-----------~~~~lPV~v~ihGG~f~~G~~~~~~~--~~~~~~~~~~vivVt~nYRlg~~Gfl~ 173 (535)
T PF00135_consen 107 DCLYLNIYTPSNAS-----------SNSKLPVMVWIHGGGFMFGSGSFPPY--DGASLAASKDVIVVTINYRLGAFGFLS 173 (535)
T ss_dssp ---EEEEEEETSSS-----------STTSEEEEEEE--STTTSSCTTSGGG--HTHHHHHHHTSEEEEE----HHHHH-B
T ss_pred hHHHHhhhhccccc-----------cccccceEEEeecccccCCCcccccc--cccccccCCCEEEEEeccccccccccc
Confidence 46788888775421 12257999999992 2 222 1333 33445677899999999994 33221
Q ss_pred CCCCCCC-CCCchHHHHHHHHHHHHH---CC--CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcC
Q 008093 205 ITSDCFY-NAGWTEDAREVIGYLHHE---YP--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICS 268 (578)
Q Consensus 205 ~~~~~~~-~~~~~~Dl~~~i~~l~~~---~~--~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~ 268 (578)
....... ..--..|...+++|+++. ++ ..+|.++|+|.||..+...+.....+..+.++|+.++
T Consensus 174 ~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG 243 (535)
T PF00135_consen 174 LGDLDAPSGNYGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSG 243 (535)
T ss_dssp SSSTTSHBSTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES-
T ss_pred ccccccCchhhhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeecccccccccccccccc
Confidence 1111111 111236999999999875 33 3579999999999998877665433447999999997
|
Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A .... |
| >COG2272 PnbA Carboxylesterase type B [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0023 Score=68.69 Aligned_cols=113 Identities=19% Similarity=0.170 Sum_probs=73.8
Q ss_pred CCCcEEEEECC--CCCCCccHHHHHHHHHHHhCC-ceEEEEeCCC--CCCCC---CCCCCCCC-CCchHHHHHHHHHHHH
Q 008093 158 DTTPIAIVIPG--LTSDSAASYIRHLVFNTAKRG-WNVVVSNHRG--LGGVS---ITSDCFYN-AGWTEDAREVIGYLHH 228 (578)
Q Consensus 158 ~~~PiVVllHG--l~G~s~~~yi~~l~~~l~~~G-y~Vvv~D~RG--~G~S~---~~~~~~~~-~~~~~Dl~~~i~~l~~ 228 (578)
...|++|++|| +.+++.+.. ..-...|+++| +-||.+|||= +|--. ....+.+. .--..|...+++|+++
T Consensus 92 ~~~PVmV~IHGG~y~~Gs~s~~-~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~~ 170 (491)
T COG2272 92 EKLPVMVYIHGGGYIMGSGSEP-LYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWVRD 170 (491)
T ss_pred CCCcEEEEEeccccccCCCccc-ccChHHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHHHH
Confidence 45799999998 222333321 11345677777 9999999994 34322 22112211 1224799999999987
Q ss_pred H---CC--CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcc
Q 008093 229 E---YP--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (578)
Q Consensus 229 ~---~~--~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d 271 (578)
. ++ ...|.++|+|.||+.++.+++--.-+..+..+|+.|++..
T Consensus 171 NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 171 NIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 4 33 4579999999999999988776433335777888877654
|
|
| >PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2 | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.002 Score=69.14 Aligned_cols=88 Identities=15% Similarity=0.154 Sum_probs=65.9
Q ss_pred HHHHHHHHHHhCCceE------EEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHH
Q 008093 177 YIRHLVFNTAKRGWNV------VVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKY 250 (578)
Q Consensus 177 yi~~l~~~l~~~Gy~V------vv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~y 250 (578)
|+..+++.|.+.||.. .-+|+|---. ........+...|+.+.+.. +.|+++|||||||.++..+
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~~~--------~~~~~~~~lk~~ie~~~~~~-~~kv~li~HSmGgl~~~~f 136 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLSPA--------ERDEYFTKLKQLIEEAYKKN-GKKVVLIAHSMGGLVARYF 136 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhchh--------hHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCchHHHHH
Confidence 4588999999988743 2257762211 11244577888888888776 7899999999999999999
Q ss_pred HhhcCCC----CCccEEEEEcCCcchh
Q 008093 251 LGEEGEK----TPVAGAAAICSPWDLL 273 (578)
Q Consensus 251 a~~~p~~----~~V~~~Vlis~p~d~~ 273 (578)
+...+.. ..|++.|.+++|+...
T Consensus 137 l~~~~~~~W~~~~i~~~i~i~~p~~Gs 163 (389)
T PF02450_consen 137 LQWMPQEEWKDKYIKRFISIGTPFGGS 163 (389)
T ss_pred HHhccchhhHHhhhhEEEEeCCCCCCC
Confidence 9887542 2699999999998643
|
3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process |
| >KOG3967 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0063 Score=58.20 Aligned_cols=115 Identities=16% Similarity=0.156 Sum_probs=73.5
Q ss_pred CCCcEEEEECCCCCCCccHHHHH--------------HHHHHHhCCceEEEEeCCCCCCC--CCCCCCCCCCCchHHHHH
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRH--------------LVFNTAKRGWNVVVSNHRGLGGV--SITSDCFYNAGWTEDARE 221 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~--------------l~~~l~~~Gy~Vvv~D~RG~G~S--~~~~~~~~~~~~~~Dl~~ 221 (578)
.....+|++||-+--....|.+. +++.+.+.||.|++.|.--+-.- ....+..|...-.+-+..
T Consensus 99 ~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~y 178 (297)
T KOG3967|consen 99 NPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKY 178 (297)
T ss_pred CccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHH
Confidence 34568999999743233344443 35677788999999986422110 112233333333344444
Q ss_pred HHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcch
Q 008093 222 VIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (578)
Q Consensus 222 ~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~ 272 (578)
+..++........+++|.||.||...+.++.+.++...|.++++-++++..
T Consensus 179 vw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~~~ 229 (297)
T KOG3967|consen 179 VWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAMGS 229 (297)
T ss_pred HHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccccC
Confidence 444444333345799999999999999999999887788888887777433
|
|
| >PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.016 Score=56.46 Aligned_cols=77 Identities=18% Similarity=0.276 Sum_probs=48.3
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCce-EEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEE
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWN-VVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAI 238 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~-Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lv 238 (578)
+-+||++-|+ |...+.+ .++. ...+|. ++++|||..--. .| + .. ...+.+|
T Consensus 11 ~~LilfF~GW-g~d~~~f-~hL~---~~~~~D~l~~yDYr~l~~d-------------~~-------~-~~--y~~i~lv 62 (213)
T PF04301_consen 11 KELILFFAGW-GMDPSPF-SHLI---LPENYDVLICYDYRDLDFD-------------FD-------L-SG--YREIYLV 62 (213)
T ss_pred CeEEEEEecC-CCChHHh-hhcc---CCCCccEEEEecCcccccc-------------cc-------c-cc--CceEEEE
Confidence 4689999999 4333322 3221 234554 566788743210 01 1 12 3479999
Q ss_pred EEchHHHHHHHHHhhcCCCCCccEEEEEcC
Q 008093 239 GTSIGANILVKYLGEEGEKTPVAGAAAICS 268 (578)
Q Consensus 239 GhSmGG~ial~ya~~~p~~~~V~~~Vlis~ 268 (578)
|+|||-.+|.+++... +++..++|++
T Consensus 63 AWSmGVw~A~~~l~~~----~~~~aiAING 88 (213)
T PF04301_consen 63 AWSMGVWAANRVLQGI----PFKRAIAING 88 (213)
T ss_pred EEeHHHHHHHHHhccC----CcceeEEEEC
Confidence 9999999998887653 4677778875
|
|
| >PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0073 Score=63.56 Aligned_cols=109 Identities=14% Similarity=0.125 Sum_probs=67.9
Q ss_pred CCcEEEEECCCCC---CCcc--HHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCC
Q 008093 159 TTPIAIVIPGLTS---DSAA--SYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKA 233 (578)
Q Consensus 159 ~~PiVVllHGl~G---~s~~--~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~ 233 (578)
+.|+||++||.+= .... .++..+...+. ...++++||.-...-+. ...|. ....++.+..+++.+..+.+
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDYsLt~~~~~--~~~yP-tQL~qlv~~Y~~Lv~~~G~~ 195 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDYSLTSSDEH--GHKYP-TQLRQLVATYDYLVESEGNK 195 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEeccccccccC--CCcCc-hHHHHHHHHHHHHHhccCCC
Confidence 4599999999421 1111 12223333333 45899999975431000 11111 34578888888998667788
Q ss_pred cEEEEEEchHHHHHHHHHhhcCC---CCCccEEEEEcCCcch
Q 008093 234 PLFAIGTSIGANILVKYLGEEGE---KTPVAGAAAICSPWDL 272 (578)
Q Consensus 234 ~i~lvGhSmGG~ial~ya~~~p~---~~~V~~~Vlis~p~d~ 272 (578)
.|+++|-|.||++++.++..... ...-+++|+|+|-.++
T Consensus 196 nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l 237 (374)
T PF10340_consen 196 NIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNL 237 (374)
T ss_pred eEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCC
Confidence 99999999999999977654222 1234688999765444
|
In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved []. |
| >KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0037 Score=69.95 Aligned_cols=102 Identities=18% Similarity=0.265 Sum_probs=61.7
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHh----------------CCceEEEEeCCC-----CCCCCCCCCCCCCCCchH
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAK----------------RGWNVVVSNHRG-----LGGVSITSDCFYNAGWTE 217 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~----------------~Gy~Vvv~D~RG-----~G~S~~~~~~~~~~~~~~ 217 (578)
++-+|+|+||..|+-.. +|.++..... ..|+.+++|.-+ ||++- ...++
T Consensus 88 sGIPVLFIPGNAGSyKQ--vRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe~tAm~G~~l--------~dQtE 157 (973)
T KOG3724|consen 88 SGIPVLFIPGNAGSYKQ--VRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEEFTAMHGHIL--------LDQTE 157 (973)
T ss_pred CCceEEEecCCCCchHH--HHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccchhhhhccHhH--------HHHHH
Confidence 34458999999886554 5666665542 235556666533 22210 12346
Q ss_pred HHHHHHHHHHHHCCC---------CcEEEEEEchHHHHHHHHHhhcCC-CCCccEEEEEcCCc
Q 008093 218 DAREVIGYLHHEYPK---------APLFAIGTSIGANILVKYLGEEGE-KTPVAGAAAICSPW 270 (578)
Q Consensus 218 Dl~~~i~~l~~~~~~---------~~i~lvGhSmGG~ial~ya~~~p~-~~~V~~~Vlis~p~ 270 (578)
-+.++|.+|...|.. ..+++|||||||.+|...+..... +..|.-++..++|.
T Consensus 158 YV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH 220 (973)
T KOG3724|consen 158 YVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPH 220 (973)
T ss_pred HHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcc
Confidence 677777777766532 239999999999999766543211 11466666666654
|
|
| >PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.02 Score=60.63 Aligned_cols=105 Identities=19% Similarity=0.222 Sum_probs=70.4
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhC-CceEEEEeCCCCCCCCCCCC-------------------CC----C-C
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKR-GWNVVVSNHRGLGGVSITSD-------------------CF----Y-N 212 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~-Gy~Vvv~D~RG~G~S~~~~~-------------------~~----~-~ 212 (578)
+.+.+|++++|++|+....|...+.+.++++ +..|+-+||-|.|.-+...+ .. . +
T Consensus 33 e~kaIvfiI~GfG~dan~~~~d~~r~~iA~~fnvv~I~V~YHCf~~R~q~~A~~~~~~~D~~iLk~~L~~i~i~~~~i~~ 112 (403)
T PF11144_consen 33 EIKAIVFIIPGFGADANSNYLDFMREYIAKKFNVVVISVNYHCFCNRPQYGAKFYFDDIDKEILKKSLEKINIDSESINT 112 (403)
T ss_pred CceEEEEEeCCcCCCcchHHHHHHHHHHHHhCCEEEEEeeeeheeeccccCchhcCCHHHHHHHHHHHHHcCcccccccc
Confidence 5677899999998888888877777777653 33445557777653222110 00 0 0
Q ss_pred ---------------------------------------------CCc--hHHHHHHHHHHHHHCC----CCcEEEEEEc
Q 008093 213 ---------------------------------------------AGW--TEDAREVIGYLHHEYP----KAPLFAIGTS 241 (578)
Q Consensus 213 ---------------------------------------------~~~--~~Dl~~~i~~l~~~~~----~~~i~lvGhS 241 (578)
.|. +-|...++.++.+.++ ..|++++|+|
T Consensus 113 ~~~~~~~~~~L~~~I~~lK~~~~L~~d~kl~ls~tl~P~n~EYQN~GIMqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s 192 (403)
T PF11144_consen 113 YDNAEQIYELLNQNITELKEQGILPQDYKLNLSCTLIPPNGEYQNFGIMQAIDIINALLDLKKIFPKNGGGLPKIYIGSS 192 (403)
T ss_pred chhHHHHHHHHHHHHHHHHhcCCCCCCcEEeEEEEecCCchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCcEEEEecC
Confidence 000 2377777777777764 2489999999
Q ss_pred hHHHHHHHHHhhcCCCCCccEEE
Q 008093 242 IGANILVKYLGEEGEKTPVAGAA 264 (578)
Q Consensus 242 mGG~ial~ya~~~p~~~~V~~~V 264 (578)
.||.++...+.-.|- .+++++
T Consensus 193 ~G~yla~l~~k~aP~--~~~~~i 213 (403)
T PF11144_consen 193 HGGYLAHLCAKIAPW--LFDGVI 213 (403)
T ss_pred cHHHHHHHHHhhCcc--ceeEEE
Confidence 999999988888887 566655
|
|
| >PLN02633 palmitoyl protein thioesterase family protein | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.025 Score=57.76 Aligned_cols=106 Identities=12% Similarity=0.091 Sum_probs=66.9
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHh-CCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH--CCCCc
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAK-RGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHE--YPKAP 234 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~-~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~--~~~~~ 234 (578)
...| +|+.||++.+....-+..+.+.+.+ .|..+.++-. |.+ . ...+.....+.+..+.+.++.. .. .-
T Consensus 24 ~~~P-~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~--~-~~s~~~~~~~Qve~vce~l~~~~~l~-~G 95 (314)
T PLN02633 24 VSVP-FIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNG--V-GDSWLMPLTQQAEIACEKVKQMKELS-QG 95 (314)
T ss_pred CCCC-eEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCC--c-cccceeCHHHHHHHHHHHHhhchhhh-Cc
Confidence 3455 7799999544333355666666644 2555555433 333 1 1222223335555555555541 12 24
Q ss_pred EEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcc
Q 008093 235 LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (578)
Q Consensus 235 i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d 271 (578)
+.++|+|.||.++-.++.+.+...+|+-+|.+++|-.
T Consensus 96 ~naIGfSQGGlflRa~ierc~~~p~V~nlISlggph~ 132 (314)
T PLN02633 96 YNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPHA 132 (314)
T ss_pred EEEEEEccchHHHHHHHHHCCCCCCcceEEEecCCCC
Confidence 9999999999999999988876457999999998753
|
|
| >cd00741 Lipase Lipase | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.0075 Score=55.60 Aligned_cols=54 Identities=11% Similarity=0.100 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCC--CCccEEEEEcCCc
Q 008093 217 EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEK--TPVAGAAAICSPW 270 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~--~~V~~~Vlis~p~ 270 (578)
.++...++....++|..+++++||||||.++..++...... ..+..++..++|-
T Consensus 12 ~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 12 NLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 45566666666668999999999999999999887766442 2456677777664
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.075 Score=56.15 Aligned_cols=153 Identities=12% Similarity=0.108 Sum_probs=95.2
Q ss_pred CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc-chhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccc
Q 008093 231 PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW-DLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSR 309 (578)
Q Consensus 231 ~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~-d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~ 309 (578)
.-.++++.|.|==|..++..|+.. + +|+|++-+.-.. ++... +... .+.|.......+..|....
T Consensus 170 ~i~~FvV~GaSKRGWTtWltaa~D-~--RV~aivP~Vid~LN~~~~---l~h~--y~~yG~~ws~a~~dY~~~g------ 235 (367)
T PF10142_consen 170 NIEKFVVTGASKRGWTTWLTAAVD-P--RVKAIVPIVIDVLNMKAN---LEHQ--YRSYGGNWSFAFQDYYNEG------ 235 (367)
T ss_pred CccEEEEeCCchHhHHHHHhhccC-c--ceeEEeeEEEccCCcHHH---HHHH--HHHhCCCCccchhhhhHhC------
Confidence 456899999999999999888844 3 799988776432 33211 1110 0001100001111111100
Q ss_pred cCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEE
Q 008093 310 LANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLA 389 (578)
Q Consensus 310 ~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~ 389 (578)
+ +.. .+-+......+..++..+.+++++|-++|+|..|++..++.......+......+.
T Consensus 236 ------i-------------~~~-l~tp~f~~L~~ivDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr 295 (367)
T PF10142_consen 236 ------I-------------TQQ-LDTPEFDKLMQIVDPYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLR 295 (367)
T ss_pred ------c-------------hhh-cCCHHHHHHHHhcCHHHHHHhcCccEEEEecCCCceeccCchHHHHhhCCCCeeEE
Confidence 0 000 01112233344556677778899999999999999999887766666677788999
Q ss_pred EeCCCCccccccccccCcccHHHHHHHHHHhhcCC
Q 008093 390 TTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSS 424 (578)
Q Consensus 390 ~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~~ 424 (578)
.+|+.+|-+-.. .+.+.+..|+..+...
T Consensus 296 ~vPN~~H~~~~~-------~~~~~l~~f~~~~~~~ 323 (367)
T PF10142_consen 296 YVPNAGHSLIGS-------DVVQSLRAFYNRIQNG 323 (367)
T ss_pred eCCCCCcccchH-------HHHHHHHHHHHHHHcC
Confidence 999999966432 4778899999987654
|
Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily. |
| >PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.015 Score=45.36 Aligned_cols=50 Identities=14% Similarity=0.240 Sum_probs=28.5
Q ss_pred CCCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCcc
Q 008093 117 CFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAA 175 (578)
Q Consensus 117 ~~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~ 175 (578)
..+.+...+++.||..+.+.-...+.. ..+....+|+|++.||+.++|..
T Consensus 9 GY~~E~h~V~T~DGYiL~l~RIp~~~~---------~~~~~~~k~pVll~HGL~~ss~~ 58 (63)
T PF04083_consen 9 GYPCEEHEVTTEDGYILTLHRIPPGKN---------SSNQNKKKPPVLLQHGLLQSSDD 58 (63)
T ss_dssp T---EEEEEE-TTSEEEEEEEE-SBTT---------CTTTTTT--EEEEE--TT--GGG
T ss_pred CCCcEEEEEEeCCCcEEEEEEccCCCC---------CcccCCCCCcEEEECCcccChHH
Confidence 456789999999999999877765431 11234678999999999776654
|
The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B. |
| >PLN02517 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.0077 Score=66.33 Aligned_cols=92 Identities=12% Similarity=0.011 Sum_probs=62.3
Q ss_pred HHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCC--CCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcC-
Q 008093 179 RHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFY--NAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEG- 255 (578)
Q Consensus 179 ~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~--~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p- 255 (578)
..+++.|.+.||. -.|++|...-=....... ..++...+...|+.+.+..++.|++++||||||.+++.++....
T Consensus 159 ~kLIe~L~~iGY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv~~ 236 (642)
T PLN02517 159 AVLIANLARIGYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWVEA 236 (642)
T ss_pred HHHHHHHHHcCCC--CCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhccc
Confidence 7889999999996 345555432100111001 12344678888988887777789999999999999998876321
Q ss_pred ---------C---CCCccEEEEEcCCcch
Q 008093 256 ---------E---KTPVAGAAAICSPWDL 272 (578)
Q Consensus 256 ---------~---~~~V~~~Vlis~p~d~ 272 (578)
. +..|++.|.|++|+-.
T Consensus 237 ~~~~gG~gG~~W~dKyI~s~I~Iagp~lG 265 (642)
T PLN02517 237 PAPMGGGGGPGWCAKHIKAVMNIGGPFLG 265 (642)
T ss_pred cccccCCcchHHHHHHHHHheecccccCC
Confidence 0 1148899999998743
|
|
| >PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides [] | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.016 Score=52.27 Aligned_cols=37 Identities=16% Similarity=0.344 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhh
Q 008093 217 EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGE 253 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~ 253 (578)
+.+.+.++.+.++++..++++.|||+||.+|..++..
T Consensus 48 ~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 48 DQILDALKELVEKYPDYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHh
Confidence 4566667777788888899999999999998877654
|
Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A .... |
| >KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.059 Score=53.65 Aligned_cols=103 Identities=16% Similarity=0.082 Sum_probs=66.1
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhC-CceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC-CCCcEEE
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKR-GWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY-PKAPLFA 237 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~-Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~-~~~~i~l 237 (578)
.| +|++||++.+..+.-+.++.+.+.+. |..|++++. |-| . ...+.....+.+..+.+.++..- -..-+.+
T Consensus 24 ~P-~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g--~---~~s~l~pl~~Qv~~~ce~v~~m~~lsqGyni 96 (296)
T KOG2541|consen 24 VP-VIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDG--I---KDSSLMPLWEQVDVACEKVKQMPELSQGYNI 96 (296)
T ss_pred CC-EEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCC--c---chhhhccHHHHHHHHHHHHhcchhccCceEE
Confidence 55 77999996544443457777777664 778888876 222 0 11112223355555666665321 1224899
Q ss_pred EEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 238 IGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 238 vGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
+|.|.||.++-.++..-+. .+|+..|.+++|-
T Consensus 97 vg~SQGglv~Raliq~cd~-ppV~n~ISL~gPh 128 (296)
T KOG2541|consen 97 VGYSQGGLVARALIQFCDN-PPVKNFISLGGPH 128 (296)
T ss_pred EEEccccHHHHHHHHhCCC-CCcceeEeccCCc
Confidence 9999999998666655544 6899999999875
|
|
| >PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.043 Score=54.32 Aligned_cols=97 Identities=20% Similarity=0.252 Sum_probs=59.0
Q ss_pred CCcEEEEECCC-CCCC-ccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCch----HHHHHHHHHHHHHCC-
Q 008093 159 TTPIAIVIPGL-TSDS-AASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWT----EDAREVIGYLHHEYP- 231 (578)
Q Consensus 159 ~~PiVVllHGl-~G~s-~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~----~Dl~~~i~~l~~~~~- 231 (578)
++.+|=|+-|. -|.. .-.| +.+.+.|+++||.|++.=+.- .+.+.... +....+++.+..+.+
T Consensus 16 P~gvihFiGGaf~ga~P~itY-r~lLe~La~~Gy~ViAtPy~~---------tfDH~~~A~~~~~~f~~~~~~L~~~~~~ 85 (250)
T PF07082_consen 16 PKGVIHFIGGAFVGAAPQITY-RYLLERLADRGYAVIATPYVV---------TFDHQAIAREVWERFERCLRALQKRGGL 85 (250)
T ss_pred CCEEEEEcCcceeccCcHHHH-HHHHHHHHhCCcEEEEEecCC---------CCcHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 44556666662 2332 3356 899999999999999986631 11111112 234445555555432
Q ss_pred ---CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEc
Q 008093 232 ---KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAIC 267 (578)
Q Consensus 232 ---~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis 267 (578)
.-|++.+|||||+-+-+.+....+. .-++-++|+
T Consensus 86 ~~~~lP~~~vGHSlGcklhlLi~s~~~~--~r~gniliS 122 (250)
T PF07082_consen 86 DPAYLPVYGVGHSLGCKLHLLIGSLFDV--ERAGNILIS 122 (250)
T ss_pred CcccCCeeeeecccchHHHHHHhhhccC--cccceEEEe
Confidence 2478999999999988776655443 235666664
|
Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis. |
| >COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.09 Score=53.40 Aligned_cols=108 Identities=13% Similarity=0.101 Sum_probs=63.5
Q ss_pred CCCCcEEEEECCCCCCCccHHHHHHHHHHHhCC----ceEEEEeCCCCCCCCCCCCCCCCC-CchHHH-HHHHHHHHHHC
Q 008093 157 DDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRG----WNVVVSNHRGLGGVSITSDCFYNA-GWTEDA-REVIGYLHHEY 230 (578)
Q Consensus 157 ~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~G----y~Vvv~D~RG~G~S~~~~~~~~~~-~~~~Dl-~~~i~~l~~~~ 230 (578)
....|++++.||-.- -...=+..+.+.+...| -.++.+|+ .........+++. ...+.+ .+++=++.++|
T Consensus 95 ~~k~pvl~~~DG~~~-~~~g~i~~~~dsli~~g~i~pai~vgid~---~d~~~R~~~~~~n~~~~~~L~~eLlP~v~~~y 170 (299)
T COG2382 95 LEKYPVLYLQDGQDW-FRSGRIPRILDSLIAAGEIPPAILVGIDY---IDVKKRREELHCNEAYWRFLAQELLPYVEERY 170 (299)
T ss_pred cccccEEEEeccHHH-HhcCChHHHHHHHHHcCCCCCceEEecCC---CCHHHHHHHhcccHHHHHHHHHHhhhhhhccC
Confidence 457899999999421 11111234555665554 23444443 2222111222221 222333 35666888888
Q ss_pred CC----CcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 231 PK----APLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 231 ~~----~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
|. ..-+++|.||||.+++..+..+|+ .+-.+++-++.+
T Consensus 171 p~~~~a~~r~L~G~SlGG~vsL~agl~~Pe--~FG~V~s~Sps~ 212 (299)
T COG2382 171 PTSADADGRVLAGDSLGGLVSLYAGLRHPE--RFGHVLSQSGSF 212 (299)
T ss_pred cccccCCCcEEeccccccHHHHHHHhcCch--hhceeeccCCcc
Confidence 63 246899999999999999999998 676666665543
|
|
| >cd00519 Lipase_3 Lipase (class 3) | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.021 Score=56.37 Aligned_cols=38 Identities=13% Similarity=0.209 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhc
Q 008093 217 EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEE 254 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~ 254 (578)
.++...+..+.+++|+.++++.||||||.+|..++...
T Consensus 112 ~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 112 NQVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred HHHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHH
Confidence 45566666677778899999999999999998777653
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >COG0627 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.021 Score=59.19 Aligned_cols=115 Identities=18% Similarity=0.283 Sum_probs=66.7
Q ss_pred CCCCcEEEEECCCCCCCccHHHHHHH-HHHHhCCceEEEEeC--CCCC------------CCCC---CCCC-CCC-CCch
Q 008093 157 DDTTPIAIVIPGLTSDSAASYIRHLV-FNTAKRGWNVVVSNH--RGLG------------GVSI---TSDC-FYN-AGWT 216 (578)
Q Consensus 157 ~~~~PiVVllHGl~G~s~~~yi~~l~-~~l~~~Gy~Vvv~D~--RG~G------------~S~~---~~~~-~~~-~~~~ 216 (578)
+.+-|++.++||.+++....|.+.=+ ....+.|+.++..|- |+.+ .+=. ..+. ... ..|.
T Consensus 51 ~~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~ 130 (316)
T COG0627 51 GRDIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWE 130 (316)
T ss_pred CCCCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchh
Confidence 35678999999998765444433333 334557888888632 2222 1100 0000 000 1111
Q ss_pred HH-HHHHHHHHHHHCC-C---CcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchh
Q 008093 217 ED-AREVIGYLHHEYP-K---APLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL 273 (578)
Q Consensus 217 ~D-l~~~i~~l~~~~~-~---~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~ 273 (578)
.= +.++-..+.+.++ . ..-.++||||||.=++++|..+|+ +++.+...++..+..
T Consensus 131 tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd--~f~~~sS~Sg~~~~s 190 (316)
T COG0627 131 TFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPD--RFKSASSFSGILSPS 190 (316)
T ss_pred HHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcc--hhceecccccccccc
Confidence 10 1122223333444 1 268999999999999999999997 888888888766543
|
|
| >PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.017 Score=49.70 Aligned_cols=61 Identities=25% Similarity=0.238 Sum_probs=48.4
Q ss_pred CccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHh
Q 008093 355 VSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 355 I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
-..|+|+|+++.||+.|.+.... ..+..++..+++.++.||..+..+ ..-+.+.|.+||..
T Consensus 33 ~~~piL~l~~~~Dp~TP~~~a~~-~~~~l~~s~lvt~~g~gHg~~~~~----s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 33 GAPPILVLGGTHDPVTPYEGARA-MAARLPGSRLVTVDGAGHGVYAGG----SPCVDKAVDDYLLD 93 (103)
T ss_pred CCCCEEEEecCcCCCCcHHHHHH-HHHHCCCceEEEEeccCcceecCC----ChHHHHHHHHHHHc
Confidence 36999999999999999886554 456677789999999999988631 12477889999874
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity |
| >COG3150 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.079 Score=49.16 Aligned_cols=90 Identities=12% Similarity=0.028 Sum_probs=51.9
Q ss_pred EEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEch
Q 008093 163 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSI 242 (578)
Q Consensus 163 VVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSm 242 (578)
+|.+|||.++..+.-...+...+.. |.|-.+.+....+ -...++.+-++.+..+.......+||-|+
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~--------~~~~i~y~~p~l~-----h~p~~a~~ele~~i~~~~~~~p~ivGssL 68 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDE--------DVRDIEYSTPHLP-----HDPQQALKELEKAVQELGDESPLIVGSSL 68 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhc--------cccceeeecCCCC-----CCHHHHHHHHHHHHHHcCCCCceEEeecc
Confidence 7899999664444332222223322 2222222221111 12345555666666666666689999999
Q ss_pred HHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 243 GANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 243 GG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
||+.+..++...+- .+|+++|..
T Consensus 69 GGY~At~l~~~~Gi-----rav~~NPav 91 (191)
T COG3150 69 GGYYATWLGFLCGI-----RAVVFNPAV 91 (191)
T ss_pred hHHHHHHHHHHhCC-----hhhhcCCCc
Confidence 99999988888754 344565543
|
|
| >PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.19 Score=54.00 Aligned_cols=135 Identities=17% Similarity=0.208 Sum_probs=75.6
Q ss_pred EEEEec--CCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHH----HH----------
Q 008093 123 QLFRLS--DGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFN----TA---------- 186 (578)
Q Consensus 123 ~~l~~~--DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~----l~---------- 186 (578)
-.+... .+..+-+ |+...+. ...++|+||.+.|-+|+|... -.+.+. +.
T Consensus 14 Gyl~~~~~~~~~lfy-w~~~s~~------------~~~~~Pl~~wlnGGPG~SS~~--g~f~e~GP~~~~~~~~~~l~~n 78 (415)
T PF00450_consen 14 GYLPVNDNENAHLFY-WFFESRN------------DPEDDPLILWLNGGPGCSSMW--GLFGENGPFRINPDGPYTLEDN 78 (415)
T ss_dssp EEEEECTTTTEEEEE-EEEE-SS------------GGCSS-EEEEEE-TTTB-THH--HHHCTTSSEEEETTSTSEEEE-
T ss_pred EEEecCCCCCcEEEE-EEEEeCC------------CCCCccEEEEecCCceecccc--ccccccCceEEeeccccccccc
Confidence 356665 5556664 4443331 246789999999998877642 122110 00
Q ss_pred ----hCCceEEEEe-CCCCCCCCCCCCCCCCCCc---hHHHHHHHHHHHHHCC---CCcEEEEEEchHHHHHHHHHh---
Q 008093 187 ----KRGWNVVVSN-HRGLGGVSITSDCFYNAGW---TEDAREVIGYLHHEYP---KAPLFAIGTSIGANILVKYLG--- 252 (578)
Q Consensus 187 ----~~Gy~Vvv~D-~RG~G~S~~~~~~~~~~~~---~~Dl~~~i~~l~~~~~---~~~i~lvGhSmGG~ial~ya~--- 252 (578)
.+-.+++-+| .-|.|-|-......+..+. .+|+.+++...-.++| ..++++.|-|+||.-+-.+|.
T Consensus 79 ~~sW~~~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~ 158 (415)
T PF00450_consen 79 PYSWNKFANLLFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYIL 158 (415)
T ss_dssp TT-GGGTSEEEEE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHH
T ss_pred ccccccccceEEEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhh
Confidence 1226788899 4589988665554332222 3566666665555665 458999999999986554442
Q ss_pred -hcCC----CCCccEEEEEcCCcch
Q 008093 253 -EEGE----KTPVAGAAAICSPWDL 272 (578)
Q Consensus 253 -~~p~----~~~V~~~Vlis~p~d~ 272 (578)
.... ...++|+++.++-.+.
T Consensus 159 ~~~~~~~~~~inLkGi~IGng~~dp 183 (415)
T PF00450_consen 159 QQNKKGDQPKINLKGIAIGNGWIDP 183 (415)
T ss_dssp HHTCC--STTSEEEEEEEESE-SBH
T ss_pred hccccccccccccccceecCccccc
Confidence 2221 3468898877665544
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A .... |
| >PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.17 Score=48.00 Aligned_cols=52 Identities=21% Similarity=0.237 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHC-CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 217 EDAREVIGYLHHEY-PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~-~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
.++..+++-|+... +..++.++|||+|+.++-..+...+. .++.+|++++|-
T Consensus 92 ~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~--~vddvv~~GSPG 144 (177)
T PF06259_consen 92 PRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGL--RVDDVVLVGSPG 144 (177)
T ss_pred HHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCC--CcccEEEECCCC
Confidence 58888888888877 77899999999999999887777444 788999998874
|
Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates. |
| >KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.083 Score=55.57 Aligned_cols=105 Identities=21% Similarity=0.258 Sum_probs=73.5
Q ss_pred CcEEEEECCCCCCCc-----cHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCC----------CCchHHHHHHHH
Q 008093 160 TPIAIVIPGLTSDSA-----ASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN----------AGWTEDAREVIG 224 (578)
Q Consensus 160 ~PiVVllHGl~G~s~-----~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~----------~~~~~Dl~~~i~ 224 (578)
.| |++--|..|+-. ..+|..+++.+ +--+|-..+|=+|.|-.-..+.+. ..-..|.++++.
T Consensus 81 gP-IffYtGNEGdie~Fa~ntGFm~D~Ap~~---~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~ 156 (492)
T KOG2183|consen 81 GP-IFFYTGNEGDIEWFANNTGFMWDLAPEL---KALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLT 156 (492)
T ss_pred Cc-eEEEeCCcccHHHHHhccchHHhhhHhh---CceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHH
Confidence 55 678888866432 12334444443 456888899999998543333221 112369999999
Q ss_pred HHHHHCC--CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 225 YLHHEYP--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 225 ~l~~~~~--~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
+++.... ..+++++|-|.||+++.-+=.++|. -+.|+.+-+.|.
T Consensus 157 ~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPH--iv~GAlAaSAPv 202 (492)
T KOG2183|consen 157 FLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPH--IVLGALAASAPV 202 (492)
T ss_pred HHhhccccccCcEEEecCchhhHHHHHHHhcChh--hhhhhhhccCce
Confidence 9988753 5689999999999999988888887 677777777664
|
|
| >COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.56 Score=47.07 Aligned_cols=43 Identities=16% Similarity=0.192 Sum_probs=34.4
Q ss_pred HHHHHCC--CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCC
Q 008093 225 YLHHEYP--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSP 269 (578)
Q Consensus 225 ~l~~~~~--~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p 269 (578)
++.++|. ..+-.++||||||.+++..+..+|+ .+...++++|.
T Consensus 127 ~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~--~F~~y~~~SPS 171 (264)
T COG2819 127 FIEARYRTNSERTAIIGHSLGGLFVLFALLTYPD--CFGRYGLISPS 171 (264)
T ss_pred HHhcccccCcccceeeeecchhHHHHHHHhcCcc--hhceeeeecch
Confidence 4444453 4468999999999999999999988 78888888764
|
|
| >KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.011 Score=63.25 Aligned_cols=90 Identities=14% Similarity=0.148 Sum_probs=64.2
Q ss_pred HHHHHHHHHHHhCCce------EEEEeCCC-CCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHH
Q 008093 176 SYIRHLVFNTAKRGWN------VVVSNHRG-LGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILV 248 (578)
Q Consensus 176 ~yi~~l~~~l~~~Gy~------Vvv~D~RG-~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial 248 (578)
+|+..+++.+..-||. -+.+|+|= +-.+... ......+...++...+.++..|++++||||||.+.+
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~~~~e~r------d~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~l 197 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRLSYHNSEER------DQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVL 197 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhhccCChhHH------HHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHH
Confidence 4678888888888886 44566663 1111100 122357888888888888889999999999999999
Q ss_pred HHHhhcCCCC------CccEEEEEcCCcc
Q 008093 249 KYLGEEGEKT------PVAGAAAICSPWD 271 (578)
Q Consensus 249 ~ya~~~p~~~------~V~~~Vlis~p~d 271 (578)
.++...+..+ .|++++.++.||-
T Consensus 198 yFl~w~~~~~~~W~~k~I~sfvnig~p~l 226 (473)
T KOG2369|consen 198 YFLKWVEAEGPAWCDKYIKSFVNIGAPWL 226 (473)
T ss_pred HHHhcccccchhHHHHHHHHHHccCchhc
Confidence 9998877631 3677777777663
|
|
| >PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids [] | Back alignment and domain information |
|---|
Probab=95.08 E-value=0.037 Score=52.68 Aligned_cols=55 Identities=18% Similarity=0.244 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCC----CCCccEEEEEcCCcc
Q 008093 217 EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGE----KTPVAGAAAICSPWD 271 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~----~~~V~~~Vlis~p~d 271 (578)
.++...++....+.|+.+++++|+|.||.++..++...+- ..+|.++++++.|..
T Consensus 65 ~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~ 123 (179)
T PF01083_consen 65 ANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRR 123 (179)
T ss_dssp HHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTT
T ss_pred HHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCcc
Confidence 5777777777788899999999999999999999887111 116899999987753
|
Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A .... |
| >PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=94.83 E-value=0.066 Score=52.89 Aligned_cols=53 Identities=15% Similarity=0.271 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCC--CCCccEEEEEcCCc
Q 008093 217 EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGE--KTPVAGAAAICSPW 270 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~--~~~V~~~Vlis~p~ 270 (578)
....+.++.+.+.++. ++.+.|||+||++|...+....+ ..+|..+...++|-
T Consensus 69 ~~A~~yl~~~~~~~~~-~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 69 KSALAYLKKIAKKYPG-KIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPG 123 (224)
T ss_pred HHHHHHHHHHHHhCCC-CEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCC
Confidence 3455566666666766 59999999999999977766432 22788888887763
|
|
| >PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children | Back alignment and domain information |
|---|
Probab=94.64 E-value=0.065 Score=54.27 Aligned_cols=108 Identities=17% Similarity=0.220 Sum_probs=48.3
Q ss_pred CCCcEEEEECCCCCCCccH-HHHHHHHHHHh--CCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCC--C
Q 008093 158 DTTPIAIVIPGLTSDSAAS-YIRHLVFNTAK--RGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYP--K 232 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~-yi~~l~~~l~~--~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~--~ 232 (578)
..+| ||+.||++.+.... -+..+...+.+ -|--|..++. |-+.++-. ...+.....+.+..+.+.++.. | .
T Consensus 4 ~~~P-vViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~i-g~~~~~D~-~~s~f~~v~~Qv~~vc~~l~~~-p~L~ 79 (279)
T PF02089_consen 4 SPLP-VVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEI-GNDPSEDV-ENSFFGNVNDQVEQVCEQLAND-PELA 79 (279)
T ss_dssp SS---EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--S-SSSHHHHH-HHHHHSHHHHHHHHHHHHHHH--GGGT
T ss_pred CCCc-EEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEE-CCCcchhh-hhhHHHHHHHHHHHHHHHHhhC-hhhh
Confidence 3455 77999995332111 13334333332 2655555554 22111000 0000011113333344444331 2 1
Q ss_pred CcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 233 APLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 233 ~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
.-+.++|+|-||.++-.++.+.+. .+|+-+|.+++|-
T Consensus 80 ~G~~~IGfSQGgl~lRa~vq~c~~-~~V~nlISlggph 116 (279)
T PF02089_consen 80 NGFNAIGFSQGGLFLRAYVQRCND-PPVHNLISLGGPH 116 (279)
T ss_dssp T-EEEEEETCHHHHHHHHHHH-TS-S-EEEEEEES--T
T ss_pred cceeeeeeccccHHHHHHHHHCCC-CCceeEEEecCcc
Confidence 359999999999999989988765 3799999999875
|
Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A. |
| >PLN02454 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.09 E-value=0.081 Score=56.45 Aligned_cols=38 Identities=18% Similarity=0.194 Sum_probs=31.7
Q ss_pred hHHHHHHHHHHHHHCCCCc--EEEEEEchHHHHHHHHHhh
Q 008093 216 TEDAREVIGYLHHEYPKAP--LFAIGTSIGANILVKYLGE 253 (578)
Q Consensus 216 ~~Dl~~~i~~l~~~~~~~~--i~lvGhSmGG~ial~ya~~ 253 (578)
.+++...++.+.++|+..+ |++.||||||.+|+..|..
T Consensus 209 r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 209 RSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 3577778888888898765 9999999999999988754
|
|
| >KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=93.93 E-value=0.26 Score=53.26 Aligned_cols=111 Identities=20% Similarity=0.191 Sum_probs=79.8
Q ss_pred CCCcEEEEECCCCCCCccHHH----HHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCC-------CCchHHHHHHHHHH
Q 008093 158 DTTPIAIVIPGLTSDSAASYI----RHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN-------AGWTEDAREVIGYL 226 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi----~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~-------~~~~~Dl~~~i~~l 226 (578)
++.|+-|++-|=+..+ ..|+ ......+.+.|-.|+.+.||=+|.|......... .....|++++|+.+
T Consensus 84 ~~gPiFLmIGGEgp~~-~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~ 162 (514)
T KOG2182|consen 84 PGGPIFLMIGGEGPES-DKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAM 162 (514)
T ss_pred CCCceEEEEcCCCCCC-CCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHH
Confidence 5668777777743222 1121 1344555667889999999999988544332211 12237999999999
Q ss_pred HHHCC---CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcc
Q 008093 227 HHEYP---KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (578)
Q Consensus 227 ~~~~~---~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d 271 (578)
..+++ +.|.+.+|-|+-|.++.-+=..+|+ .+.|+|+-+.|..
T Consensus 163 n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPe--l~~GsvASSapv~ 208 (514)
T KOG2182|consen 163 NAKFNFSDDSKWITFGGSYSGSLSAWFREKYPE--LTVGSVASSAPVL 208 (514)
T ss_pred HhhcCCCCCCCeEEECCCchhHHHHHHHHhCch--hheeeccccccee
Confidence 98884 2489999999999999988888999 8899998888863
|
|
| >PLN02162 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=93.87 E-value=0.14 Score=55.29 Aligned_cols=53 Identities=15% Similarity=0.241 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHh---hcCCC---CCccEEEEEcCCc
Q 008093 218 DAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLG---EEGEK---TPVAGAAAICSPW 270 (578)
Q Consensus 218 Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~---~~p~~---~~V~~~Vlis~p~ 270 (578)
.+.+.++.+..++|+.++++.|||+||.+|...+. .++.. .++.+++..++|-
T Consensus 263 ~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa~L~~~~~~~l~~~~~~vYTFGqPR 321 (475)
T PLN02162 263 TIRQMLRDKLARNKNLKYILTGHSLGGALAALFPAILAIHGEDELLDKLEGIYTFGQPR 321 (475)
T ss_pred HHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHHHHHHccccccccccceEEEeCCCC
Confidence 45556666667788889999999999999987654 22221 1345666666653
|
|
| >PLN00413 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=93.84 E-value=0.14 Score=55.36 Aligned_cols=52 Identities=13% Similarity=0.303 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhh---cCC-C--CCccEEEEEcCC
Q 008093 218 DAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGE---EGE-K--TPVAGAAAICSP 269 (578)
Q Consensus 218 Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~---~p~-~--~~V~~~Vlis~p 269 (578)
++...++.+.+++|+.++++.|||+||++|...+.. +.+ + .++.++...++|
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~P 326 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQP 326 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCC
Confidence 466677777788999999999999999999977642 111 1 135566666665
|
|
| >COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=93.81 E-value=0.15 Score=53.58 Aligned_cols=86 Identities=17% Similarity=0.146 Sum_probs=62.6
Q ss_pred EEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEc
Q 008093 162 IAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTS 241 (578)
Q Consensus 162 iVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhS 241 (578)
.-||.-|=+| -.. .=+....+|+++|+.|+.+|-.-+=-++.++ ....+|+..++++-..+.+..++.++|+|
T Consensus 262 ~av~~SGDGG-Wr~-lDk~v~~~l~~~gvpVvGvdsLRYfW~~rtP-----e~~a~Dl~r~i~~y~~~w~~~~~~liGyS 334 (456)
T COG3946 262 VAVFYSGDGG-WRD-LDKEVAEALQKQGVPVVGVDSLRYFWSERTP-----EQIAADLSRLIRFYARRWGAKRVLLIGYS 334 (456)
T ss_pred EEEEEecCCc-hhh-hhHHHHHHHHHCCCceeeeehhhhhhccCCH-----HHHHHHHHHHHHHHHHhhCcceEEEEeec
Confidence 4556666533 222 2267888999999999999975554444432 24568999999999999988999999999
Q ss_pred hHHHHHHHHHhhc
Q 008093 242 IGANILVKYLGEE 254 (578)
Q Consensus 242 mGG~ial~ya~~~ 254 (578)
+|+-+.-......
T Consensus 335 fGADvlP~~~n~L 347 (456)
T COG3946 335 FGADVLPFAYNRL 347 (456)
T ss_pred ccchhhHHHHHhC
Confidence 9998875444333
|
|
| >COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=93.57 E-value=0.6 Score=47.11 Aligned_cols=256 Identities=13% Similarity=0.214 Sum_probs=124.7
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEE
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAI 238 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lv 238 (578)
..|.|+++--+.| +....++..++.|.. -..|++-|+-..-..+.....+...+..+-+.++++++ .|+ ++++
T Consensus 102 pdPkvLivapmsG-H~aTLLR~TV~alLp-~~~vyitDW~dAr~Vp~~~G~FdldDYIdyvie~~~~~---Gp~--~hv~ 174 (415)
T COG4553 102 PDPKVLIVAPMSG-HYATLLRGTVEALLP-YHDVYITDWVDARMVPLEAGHFDLDDYIDYVIEMINFL---GPD--AHVM 174 (415)
T ss_pred CCCeEEEEecccc-cHHHHHHHHHHHhcc-ccceeEeeccccceeecccCCccHHHHHHHHHHHHHHh---CCC--CcEE
Confidence 3467888888865 444556888888765 35788888876555554433322222223333333333 333 5555
Q ss_pred EEchHHHHHH---HHHhhcCCCCCccEEEEEcCCcchhhhhHHHhh----H----H---------------HHHHH----
Q 008093 239 GTSIGANILV---KYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGR----R----L---------------IQKIY---- 288 (578)
Q Consensus 239 GhSmGG~ial---~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~----~----~---------------~~~~~---- 288 (578)
+.+.-+.-++ .+.++.++...-..++++++|.|.......... + + -+++|
T Consensus 175 aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPIDaR~nPTavN~lA~~k~~~WF~~n~vm~vP~~ypg~gR~VYPGFl 254 (415)
T COG4553 175 AVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDARKNPTAVNELATEKSIEWFRDNVVMQVPPPYPGFGRRVYPGFL 254 (415)
T ss_pred EEecCCchHHHHHHHHHhcCCCCCCceeeeecCccccccCcHHHhHhhhccchHHHHhCeeeecCCCCCCccccccccHH
Confidence 5555443222 223344443345688899999886543221110 0 0 00111
Q ss_pred --HHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCC-----CCCHHHHHHhCCcc-----c-----c
Q 008093 289 --DRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGK-----FETVDTYYRNCSSS-----T-----Y 351 (578)
Q Consensus 289 --~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g-----~~~~~~yy~~~s~~-----~-----~ 351 (578)
...+..++.+.+..|...+..+..-+ -.++....+|.+.+.+.+.- .+++++.+.+.... . .
T Consensus 255 QlagFmsmNldrH~~aH~~~~~~Lv~~D-~~~Ae~h~~FYdEYlavmdl~aEfYLqTid~VFqq~~LpkG~~vhrg~~vd 333 (415)
T COG4553 255 QLAGFMSMNLDRHIDAHKDFFLSLVKND-GDSAEKHREFYDEYLAVMDLTAEFYLQTIDEVFQQHALPKGEMVHRGKPVD 333 (415)
T ss_pred HhhhHhhcChhhhHHHHHHHHHHHHccc-chhHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhcccCCceeecCCcCC
Confidence 11222233333333333222211111 01122233443333222110 11222222222111 0 1
Q ss_pred cCCC-ccceEEEEeCCCCCCCCCCc--chHHHhcCCC--EEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcC
Q 008093 352 VGNV-SIPLLCISSLDDPVCTVEAI--PWDECRANKN--VVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHS 423 (578)
Q Consensus 352 l~~I-~vPvLiI~g~dDpivp~~~~--~~~~~~~~~~--~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~ 423 (578)
...| ++-++-+-|++|.|.-.... ...+|...+. ....+-++.||.|.+.|.. -+..+.-.+.+|+.....
T Consensus 334 p~~I~~~aL~tvEGEnDDIsgvGQTkAA~~LC~nIpe~mk~hy~qp~vGHYGVFnGsr-fr~eIvPri~dFI~~~d~ 409 (415)
T COG4553 334 PTAITNVALFTVEGENDDISGVGQTKAAHDLCSNIPEDMKQHYMQPDVGHYGVFNGSR-FREEIVPRIRDFIRRYDR 409 (415)
T ss_pred hhheeceeEEEeecccccccccchhHHHHHHHhcChHHHHHHhcCCCCCccceeccch-HHHHHHHHHHHHHHHhCc
Confidence 1223 57788999999999765422 2234544432 2445668899999998732 123566788999887643
|
|
| >COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism] | Back alignment and domain information |
|---|
Probab=93.18 E-value=0.16 Score=50.88 Aligned_cols=52 Identities=27% Similarity=0.340 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchh
Q 008093 217 EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL 273 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~ 273 (578)
.+..+++..+++.||+++|.+.|||+||.+|..+-..++- -+|+..+|-|..
T Consensus 260 Sa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fgl-----P~VaFesPGd~~ 311 (425)
T COG5153 260 SAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFGL-----PVVAFESPGDAY 311 (425)
T ss_pred HHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccCC-----ceEEecCchhhh
Confidence 4677778888999999999999999999999876666654 245666676554
|
|
| >KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.18 E-value=0.16 Score=50.88 Aligned_cols=52 Identities=27% Similarity=0.340 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchh
Q 008093 217 EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL 273 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~ 273 (578)
.+..+++..+++.||+++|.+.|||+||.+|..+-..++- -+|+..+|-|..
T Consensus 260 Sa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fgl-----P~VaFesPGd~~ 311 (425)
T KOG4540|consen 260 SAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFGL-----PVVAFESPGDAY 311 (425)
T ss_pred HHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccCC-----ceEEecCchhhh
Confidence 4677778888999999999999999999999876666654 245666676554
|
|
| >PLN02934 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=92.98 E-value=0.22 Score=54.36 Aligned_cols=35 Identities=20% Similarity=0.315 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHh
Q 008093 218 DAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLG 252 (578)
Q Consensus 218 Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~ 252 (578)
.+...++.+.+++|+.++++.|||+||.+|...+.
T Consensus 306 ~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 306 AVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 46777777888899999999999999999997764
|
|
| >PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=92.91 E-value=0.19 Score=48.72 Aligned_cols=81 Identities=23% Similarity=0.204 Sum_probs=49.8
Q ss_pred CceEEEEeCCCCCCCCCC-CCC----CCCCCchHHHHHHHHHHHHHC-CCCcEEEEEEchHHHHHHHHHhhcCC----CC
Q 008093 189 GWNVVVSNHRGLGGVSIT-SDC----FYNAGWTEDAREVIGYLHHEY-PKAPLFAIGTSIGANILVKYLGEEGE----KT 258 (578)
Q Consensus 189 Gy~Vvv~D~RG~G~S~~~-~~~----~~~~~~~~Dl~~~i~~l~~~~-~~~~i~lvGhSmGG~ial~ya~~~p~----~~ 258 (578)
-.+|+++=||=....... ... .....-..|+.++.++-.+.+ ..+|++++|||.|+.++.+++.+.=+ ..
T Consensus 45 ~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~~~~~pl~~ 124 (207)
T PF11288_consen 45 VCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEEIAGDPLRK 124 (207)
T ss_pred CCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHHhcCchHHh
Confidence 358999988853322111 110 000111268988888666665 56799999999999999999987522 12
Q ss_pred CccEEEEEcCC
Q 008093 259 PVAGAAAICSP 269 (578)
Q Consensus 259 ~V~~~Vlis~p 269 (578)
++.++-+|+-+
T Consensus 125 rLVAAYliG~~ 135 (207)
T PF11288_consen 125 RLVAAYLIGYP 135 (207)
T ss_pred hhheeeecCcc
Confidence 44455555433
|
|
| >PLN03016 sinapoylglucose-malate O-sinapoyltransferase | Back alignment and domain information |
|---|
Probab=92.63 E-value=1.5 Score=47.72 Aligned_cols=112 Identities=15% Similarity=0.075 Sum_probs=64.3
Q ss_pred CCCCcEEEEECCCCCCCccHH-HHHHHHH-------------HH------hCCceEEEEe-CCCCCCCCCCCCCCCCCC-
Q 008093 157 DDTTPIAIVIPGLTSDSAASY-IRHLVFN-------------TA------KRGWNVVVSN-HRGLGGVSITSDCFYNAG- 214 (578)
Q Consensus 157 ~~~~PiVVllHGl~G~s~~~y-i~~l~~~-------------l~------~~Gy~Vvv~D-~RG~G~S~~~~~~~~~~~- 214 (578)
..+.|+|+.+-|-.|+|...- +...... +. .+-.+++-+| .-|.|-|-...+..+...
T Consensus 63 ~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~d~ 142 (433)
T PLN03016 63 PKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDKTGDI 142 (433)
T ss_pred cccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCCCccCCH
Confidence 356799999999988776311 0111111 10 0125788889 668888854433222211
Q ss_pred -chHHHHHHHHHHHHHCC---CCcEEEEEEchHHHHHHHHHhh----cC----CCCCccEEEEEcC
Q 008093 215 -WTEDAREVIGYLHHEYP---KAPLFAIGTSIGANILVKYLGE----EG----EKTPVAGAAAICS 268 (578)
Q Consensus 215 -~~~Dl~~~i~~l~~~~~---~~~i~lvGhSmGG~ial~ya~~----~p----~~~~V~~~Vlis~ 268 (578)
..+|+.+++...-+++| ..++++.|.|.||..+-.+|.+ .. ....++|+++-++
T Consensus 143 ~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg 208 (433)
T PLN03016 143 SEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNP 208 (433)
T ss_pred HHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCC
Confidence 12455555555445555 4689999999999765555433 11 1236778775554
|
|
| >PLN02571 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=91.68 E-value=0.25 Score=52.87 Aligned_cols=37 Identities=19% Similarity=0.318 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHCCCC--cEEEEEEchHHHHHHHHHhh
Q 008093 217 EDAREVIGYLHHEYPKA--PLFAIGTSIGANILVKYLGE 253 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~~~--~i~lvGhSmGG~ial~ya~~ 253 (578)
+++.+.+..+.++|++. +|++.||||||.+|+..|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 45666666677777654 69999999999999987754
|
|
| >PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=91.63 E-value=0.52 Score=50.01 Aligned_cols=108 Identities=19% Similarity=0.189 Sum_probs=81.3
Q ss_pred CCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCC----CCchHHHHHHHHHHHHHCCC
Q 008093 157 DDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN----AGWTEDAREVIGYLHHEYPK 232 (578)
Q Consensus 157 ~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~----~~~~~Dl~~~i~~l~~~~~~ 232 (578)
+.++|+|+..-|..- +....-......+ +=+-+.+.+|=+|.|...+ ..+. ..-..|.+.+++.++..|+.
T Consensus 60 ~~drPtV~~T~GY~~-~~~p~r~Ept~Ll---d~NQl~vEhRfF~~SrP~p-~DW~~Lti~QAA~D~Hri~~A~K~iY~~ 134 (448)
T PF05576_consen 60 DFDRPTVLYTEGYNV-STSPRRSEPTQLL---DGNQLSVEHRFFGPSRPEP-ADWSYLTIWQAASDQHRIVQAFKPIYPG 134 (448)
T ss_pred CCCCCeEEEecCccc-ccCccccchhHhh---ccceEEEEEeeccCCCCCC-CCcccccHhHhhHHHHHHHHHHHhhccC
Confidence 467899999999854 3332313333333 2367889999999986553 2222 23347999999999999976
Q ss_pred CcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcch
Q 008093 233 APLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (578)
Q Consensus 233 ~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~ 272 (578)
+.+--|.|=||+.++.|=.-+|+ .|++.|....|.|.
T Consensus 135 -kWISTG~SKGGmTa~y~rrFyP~--DVD~tVaYVAP~~~ 171 (448)
T PF05576_consen 135 -KWISTGGSKGGMTAVYYRRFYPD--DVDGTVAYVAPNDV 171 (448)
T ss_pred -CceecCcCCCceeEEEEeeeCCC--CCCeeeeeeccccc
Confidence 79999999999999988888888 79999998888764
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ]. |
| >PLN02408 phospholipase A1 | Back alignment and domain information |
|---|
Probab=91.63 E-value=0.26 Score=51.92 Aligned_cols=38 Identities=29% Similarity=0.293 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHCCCC--cEEEEEEchHHHHHHHHHhhc
Q 008093 217 EDAREVIGYLHHEYPKA--PLFAIGTSIGANILVKYLGEE 254 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~~~--~i~lvGhSmGG~ial~ya~~~ 254 (578)
+++.+.+..+.++|++. +|++.||||||.+|...|...
T Consensus 182 ~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 182 EMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 45666677777788764 599999999999999776543
|
|
| >PLN02209 serine carboxypeptidase | Back alignment and domain information |
|---|
Probab=91.56 E-value=2.5 Score=46.14 Aligned_cols=112 Identities=13% Similarity=0.101 Sum_probs=64.5
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHH----------------HHHh------CCceEEEEe-CCCCCCCCCCCCCCCCC-
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVF----------------NTAK------RGWNVVVSN-HRGLGGVSITSDCFYNA- 213 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~----------------~l~~------~Gy~Vvv~D-~RG~G~S~~~~~~~~~~- 213 (578)
.+.|+|+++-|-.|+|.. + -.+.+ .+.. +-.+++-+| .-|.|-|-...+..+..
T Consensus 66 ~~~Pl~lWlnGGPG~SS~-~-g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~ 143 (437)
T PLN02209 66 QEDPLIIWLNGGPGCSCL-S-GLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIERTSD 143 (437)
T ss_pred CCCCEEEEECCCCcHHHh-h-hHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEEEecCCCCCCccCCCCCCCccCC
Confidence 567999999999887753 1 11110 0100 124778888 56788874333222211
Q ss_pred -CchHHHHHHHHHHHHHCC---CCcEEEEEEchHHHHHHHHHhhc---C-----CCCCccEEEEEcCCcc
Q 008093 214 -GWTEDAREVIGYLHHEYP---KAPLFAIGTSIGANILVKYLGEE---G-----EKTPVAGAAAICSPWD 271 (578)
Q Consensus 214 -~~~~Dl~~~i~~l~~~~~---~~~i~lvGhSmGG~ial~ya~~~---p-----~~~~V~~~Vlis~p~d 271 (578)
...+|+.+++...-+++| ..++++.|.|+||.-+-.+|..- . ....++|+++.++-.|
T Consensus 144 ~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td 213 (437)
T PLN02209 144 TSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITH 213 (437)
T ss_pred HHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccC
Confidence 123455555555445565 46899999999997655444321 1 1235778776665444
|
|
| >KOG2521 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=91.41 E-value=2.6 Score=44.28 Aligned_cols=241 Identities=15% Similarity=0.036 Sum_probs=118.6
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC--CCCcEE
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY--PKAPLF 236 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~--~~~~i~ 236 (578)
.+|+| ++=||+| ..+.++......+.+.||.++-+-.+-+-.....+.+.. ...+....+..+...+ ...|++
T Consensus 38 ~k~Iv-~~~gWag-~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~~~~---sl~~~~~~l~~L~~~~~~~~~pi~ 112 (350)
T KOG2521|consen 38 EKPIV-VLLGWAG-AIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSASRRIL---SLSLASTRLSELLSDYNSDPCPII 112 (350)
T ss_pred cccEE-EEeeecc-ccchhHHHHHHHHhcCCceEEEecCcccccccccccccc---hhhHHHHHHHHHhhhccCCcCceE
Confidence 34655 5556655 444577788888899999999988776543322222111 1233434455554444 356888
Q ss_pred EEEEchHHHHHHHHH-hh--c--CCCC-CccEEEEEcCCcchhhhhHHHhhHH---HHHHHHHHHHHhHHHHHhhhcccc
Q 008093 237 AIGTSIGANILVKYL-GE--E--GEKT-PVAGAAAICSPWDLLIGDRFIGRRL---IQKIYDRALTIGLQDYAQLHEPRY 307 (578)
Q Consensus 237 lvGhSmGG~ial~ya-~~--~--p~~~-~V~~~Vlis~p~d~~~~~~~l~~~~---~~~~~~~~l~~~l~~~~~~~~~~l 307 (578)
..-+||||...+... .+ . +... ...+.+..+.|.............. ...-...+...+ .+...+
T Consensus 113 fh~FS~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~~~~~~~~~a~~~~~~~~~~~~~~~~~~------~~i~~~ 186 (350)
T KOG2521|consen 113 FHVFSGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPARSSPVQLGWAVSFSSPPDDYVARWARLN------YHITLL 186 (350)
T ss_pred EEEecCCceeehHHHHHHHhhcCchhHhhcCCceEeccccccchhhhcceeccccCchhhHHHHHhcC------eEEEEE
Confidence 899999998876543 11 1 2211 2445666666554322110000000 000000000000 000000
Q ss_pred cccCCHHHHhccCCHHHHHhhhhhccCCCCC-HHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchH---HHhcC
Q 008093 308 SRLANWEGIKKSRSIRDFDSHATCLVGKFET-VDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWD---ECRAN 383 (578)
Q Consensus 308 ~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~-~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~---~~~~~ 383 (578)
...... .....+.........+... .-++|.. .-.+...+.+.+.+..|.++|.+.+... .....
T Consensus 187 ~~~~~~------~~~~~~~~~~~~~~~~r~~~~~~r~~~-----~~~~~~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g 255 (350)
T KOG2521|consen 187 TMAGNE------GGAYLLGPLAEKISMSRKYHFLDRYEE-----QRNELPWNQLYLYSDNDDVLPADEIEKFIALRREKG 255 (350)
T ss_pred Eeeecc------cchhhhhhhhhccccccchHHHHHHHh-----hhhcccccceeecCCccccccHHHHHHHHHHHHhcC
Confidence 000000 0000000000000011110 0111111 1112246778888999999998866543 23345
Q ss_pred CCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcCC
Q 008093 384 KNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSS 424 (578)
Q Consensus 384 ~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~~ 424 (578)
-++..+-...+-|++++.. .+..+.+...+|++.....
T Consensus 256 ~~v~s~~~~ds~H~~h~r~---~p~~y~~~~~~Fl~~~~~~ 293 (350)
T KOG2521|consen 256 VNVKSVKFKDSEHVAHFRS---FPKTYLKKCSEFLRSVISS 293 (350)
T ss_pred ceEEEeeccCccceeeecc---CcHHHHHHHHHHHHhcccc
Confidence 5667777788899998874 3446889999999987544
|
|
| >KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.31 E-value=0.35 Score=51.10 Aligned_cols=84 Identities=15% Similarity=0.191 Sum_probs=43.7
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhC--CceEEEEeCCCCCCCCCCCCCCCC--CCchHHHHHHHHHHHHHCCCC
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKR--GWNVVVSNHRGLGGVSITSDCFYN--AGWTEDAREVIGYLHHEYPKA 233 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~--Gy~Vvv~D~RG~G~S~~~~~~~~~--~~~~~Dl~~~i~~l~~~~~~~ 233 (578)
.+.-.||+.||+-|+.. .|+...+....+. +..++....+|. .-.+...... .+..+++.+.+... .-.
T Consensus 78 k~~HLvVlthGi~~~~~-~~~~~~~~~~~kk~p~~~iv~~g~~~~--~~~T~~Gv~~lG~Rla~~~~e~~~~~----si~ 150 (405)
T KOG4372|consen 78 KPKHLVVLTHGLHGADM-EYWKEKIEQMTKKMPDKLIVVRGKMNN--MCQTFDGVDVLGERLAEEVKETLYDY----SIE 150 (405)
T ss_pred CCceEEEeccccccccH-HHHHHHHHhhhcCCCcceEeeeccccc--hhhccccceeeecccHHHHhhhhhcc----ccc
Confidence 44568999999987333 4445555555543 343433333332 2112121111 22223333222211 135
Q ss_pred cEEEEEEchHHHHHH
Q 008093 234 PLFAIGTSIGANILV 248 (578)
Q Consensus 234 ~i~lvGhSmGG~ial 248 (578)
+|-.+|||+||.++.
T Consensus 151 kISfvghSLGGLvar 165 (405)
T KOG4372|consen 151 KISFVGHSLGGLVAR 165 (405)
T ss_pred eeeeeeeecCCeeee
Confidence 899999999998875
|
|
| >KOG4569 consensus Predicted lipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.36 E-value=0.39 Score=50.49 Aligned_cols=59 Identities=19% Similarity=0.341 Sum_probs=42.6
Q ss_pred CCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhh---cCCC-CCccEEEEEcCC
Q 008093 211 YNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGE---EGEK-TPVAGAAAICSP 269 (578)
Q Consensus 211 ~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~---~p~~-~~V~~~Vlis~p 269 (578)
+...|...+.+.++.+...+|+-.+.+.||||||.+|...|.. .+.. ..-.+++..+.|
T Consensus 149 ~~~~~~~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~i~~~~~~~~~~v~v~tFG~P 211 (336)
T KOG4569|consen 149 YTSLWNSGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALDLVKNGLKTSSPVKVYTFGQP 211 (336)
T ss_pred hccccHHHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHHHHHcCCCCCCceEEEEecCC
Confidence 3445557888999999999999999999999999999876643 3321 123355556555
|
|
| >PLN02847 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=90.14 E-value=0.52 Score=52.32 Aligned_cols=36 Identities=17% Similarity=0.145 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhh
Q 008093 218 DAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGE 253 (578)
Q Consensus 218 Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~ 253 (578)
++...+..+..++|+-+++++||||||.+|...+..
T Consensus 236 ~i~~~L~kal~~~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 236 LSTPCLLKALDEYPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHHHHHHHHHHHCCCCeEEEeccChHHHHHHHHHHH
Confidence 344445555667888899999999999998876543
|
|
| >KOG1516 consensus Carboxylesterase and related proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=90.05 E-value=0.37 Score=54.03 Aligned_cols=109 Identities=20% Similarity=0.136 Sum_probs=62.9
Q ss_pred CcEEEEECCCCC--CCccHH-HHHHHHHHHhCCceEEEEeCCC--CCCC-CCCCCCCCCCCchHHHHHHHHHHHHHC---
Q 008093 160 TPIAIVIPGLTS--DSAASY-IRHLVFNTAKRGWNVVVSNHRG--LGGV-SITSDCFYNAGWTEDAREVIGYLHHEY--- 230 (578)
Q Consensus 160 ~PiVVllHGl~G--~s~~~y-i~~l~~~l~~~Gy~Vvv~D~RG--~G~S-~~~~~~~~~~~~~~Dl~~~i~~l~~~~--- 230 (578)
.|++|++||.+- ++...+ .......+..+..-||.+++|= .|.- ........+.+ ..|...+++|+++.-
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~g-l~Dq~~AL~wv~~~I~~F 190 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLG-LFDQLLALRWVKDNIPSF 190 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCccc-HHHHHHHHHHHHHHHHhc
Confidence 799999999421 121111 1223334445567888899983 3311 11111111222 258999999998753
Q ss_pred --CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCC
Q 008093 231 --PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSP 269 (578)
Q Consensus 231 --~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p 269 (578)
+..++.++|||.||..+.........+..+..+|..++.
T Consensus 191 GGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 191 GGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGN 231 (545)
T ss_pred CCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccc
Confidence 245799999999999986554332221245566666543
|
|
| >PLN02324 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=89.96 E-value=0.45 Score=50.85 Aligned_cols=37 Identities=22% Similarity=0.263 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHCCCC--cEEEEEEchHHHHHHHHHhh
Q 008093 217 EDAREVIGYLHHEYPKA--PLFAIGTSIGANILVKYLGE 253 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~~~--~i~lvGhSmGG~ial~ya~~ 253 (578)
+.+.+.+..+.++|++. .|++.||||||.+|+..|..
T Consensus 197 eqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 197 EQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 45666677777888753 69999999999999977654
|
|
| >PLN02719 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=89.05 E-value=0.54 Score=51.35 Aligned_cols=37 Identities=19% Similarity=0.236 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHCCC-----CcEEEEEEchHHHHHHHHHhh
Q 008093 217 EDAREVIGYLHHEYPK-----APLFAIGTSIGANILVKYLGE 253 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~~-----~~i~lvGhSmGG~ial~ya~~ 253 (578)
+++.+.+..+.++|++ .+|.+.||||||.+|+..|..
T Consensus 277 eQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 277 EQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 5677777777778864 379999999999999987643
|
|
| >PLN02802 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=88.71 E-value=0.6 Score=50.99 Aligned_cols=38 Identities=21% Similarity=0.270 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHCCCC--cEEEEEEchHHHHHHHHHhhc
Q 008093 217 EDAREVIGYLHHEYPKA--PLFAIGTSIGANILVKYLGEE 254 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~~~--~i~lvGhSmGG~ial~ya~~~ 254 (578)
+++.+-+..+.++|++. +|++.||||||.+++..+...
T Consensus 312 eqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 312 ESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 45566666667778653 699999999999999776543
|
|
| >PLN02761 lipase class 3 family protein | Back alignment and domain information |
|---|
Probab=87.80 E-value=0.7 Score=50.63 Aligned_cols=36 Identities=19% Similarity=0.217 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHCC------CCcEEEEEEchHHHHHHHHHh
Q 008093 217 EDAREVIGYLHHEYP------KAPLFAIGTSIGANILVKYLG 252 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~------~~~i~lvGhSmGG~ial~ya~ 252 (578)
+++.+.|..+...|+ ..+|++.||||||.+|+..|.
T Consensus 272 ~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 272 EQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 567777777777773 347999999999999997664
|
|
| >COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=87.74 E-value=3 Score=45.49 Aligned_cols=95 Identities=18% Similarity=0.197 Sum_probs=62.1
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHH---HHhCC---------------ceEEEEe-CCCCCCCCC--CCCCCCCCCch
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFN---TAKRG---------------WNVVVSN-HRGLGGVSI--TSDCFYNAGWT 216 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~---l~~~G---------------y~Vvv~D-~RG~G~S~~--~~~~~~~~~~~ 216 (578)
.++|+++.+.|-.|+|.. + -.+.+. -...| =.++-+| .-|.|.|.. ........+..
T Consensus 99 ~~rPvi~wlNGGPGcSS~-~-g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~~d~~~~~ 176 (498)
T COG2939 99 ANRPVIFWLNGGPGCSSV-T-GLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKDFEGAG 176 (498)
T ss_pred CCCceEEEecCCCChHhh-h-hhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccccccchhccc
Confidence 578999999999887664 2 122110 00001 2577778 667887753 22222233455
Q ss_pred HHHHHHHHHHHHHCC-----CCcEEEEEEchHHHHHHHHHhhc
Q 008093 217 EDAREVIGYLHHEYP-----KAPLFAIGTSIGANILVKYLGEE 254 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~-----~~~i~lvGhSmGG~ial~ya~~~ 254 (578)
+|+..+.+.+.+.++ ..+.+++|-|+||.-+..+|.+.
T Consensus 177 ~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L 219 (498)
T COG2939 177 KDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHEL 219 (498)
T ss_pred hhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHH
Confidence 899999988877654 24899999999998877776553
|
|
| >PLN02753 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=87.72 E-value=0.71 Score=50.62 Aligned_cols=36 Identities=17% Similarity=0.144 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHCC-----CCcEEEEEEchHHHHHHHHHh
Q 008093 217 EDAREVIGYLHHEYP-----KAPLFAIGTSIGANILVKYLG 252 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~-----~~~i~lvGhSmGG~ial~ya~ 252 (578)
+++.+.+..+..+|+ ..+|++.||||||.+|+..|.
T Consensus 291 eQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 291 EQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 566666777777775 358999999999999997764
|
|
| >PLN02310 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=87.56 E-value=0.59 Score=49.95 Aligned_cols=37 Identities=22% Similarity=0.258 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHCC----CCcEEEEEEchHHHHHHHHHhh
Q 008093 217 EDAREVIGYLHHEYP----KAPLFAIGTSIGANILVKYLGE 253 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~----~~~i~lvGhSmGG~ial~ya~~ 253 (578)
+.+.+.+..+...|+ ..+|.+.||||||.+|+..+..
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 445555555655553 4579999999999999877644
|
|
| >PLN03037 lipase class 3 family protein; Provisional | Back alignment and domain information |
|---|
Probab=86.21 E-value=0.72 Score=50.52 Aligned_cols=36 Identities=19% Similarity=0.219 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHCC----CCcEEEEEEchHHHHHHHHHhh
Q 008093 218 DAREVIGYLHHEYP----KAPLFAIGTSIGANILVKYLGE 253 (578)
Q Consensus 218 Dl~~~i~~l~~~~~----~~~i~lvGhSmGG~ial~ya~~ 253 (578)
++.+.+..+.+.|+ ..+|++.||||||.+|+..|..
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 44444555555553 3479999999999999877644
|
|
| >COG4947 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=85.64 E-value=1.9 Score=40.34 Aligned_cols=50 Identities=16% Similarity=0.173 Sum_probs=39.3
Q ss_pred HHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcch
Q 008093 221 EVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (578)
Q Consensus 221 ~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~ 272 (578)
+.-.|+..+.-....++-|.||||..++++.-++|+ .+.++|+++..+|.
T Consensus 89 AyerYv~eEalpgs~~~sgcsmGayhA~nfvfrhP~--lftkvialSGvYda 138 (227)
T COG4947 89 AYERYVIEEALPGSTIVSGCSMGAYHAANFVFRHPH--LFTKVIALSGVYDA 138 (227)
T ss_pred HHHHHHHHhhcCCCccccccchhhhhhhhhheeChh--HhhhheeecceeeH
Confidence 344456554422357889999999999999999999 88999999888876
|
|
| >KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=83.94 E-value=11 Score=41.31 Aligned_cols=127 Identities=15% Similarity=0.242 Sum_probs=71.8
Q ss_pred EEEEec--CCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCC-----------
Q 008093 123 QLFRLS--DGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRG----------- 189 (578)
Q Consensus 123 ~~l~~~--DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~G----------- 189 (578)
-.++.. +|..+-+..++... ....+|+||.+-|-.|+|.- ..+. .+.|
T Consensus 47 GYv~v~~~~~~~LFYwf~eS~~-------------~P~~dPlvLWLnGGPGCSSl---~G~~---~E~GPf~v~~~G~tL 107 (454)
T KOG1282|consen 47 GYVTVNESEGRQLFYWFFESEN-------------NPETDPLVLWLNGGPGCSSL---GGLF---EENGPFRVKYNGKTL 107 (454)
T ss_pred ceEECCCCCCceEEEEEEEccC-------------CCCCCCEEEEeCCCCCccch---hhhh---hhcCCeEEcCCCCcc
Confidence 355555 46666654444322 23568999999999998873 1222 2222
Q ss_pred ----------ceEEEEeCC-CCCCCCCCCCCCCCC---CchHHHHHHHHHHHHHCC---CCcEEEEEEchHHHHHHHHHh
Q 008093 190 ----------WNVVVSNHR-GLGGVSITSDCFYNA---GWTEDAREVIGYLHHEYP---KAPLFAIGTSIGANILVKYLG 252 (578)
Q Consensus 190 ----------y~Vvv~D~R-G~G~S~~~~~~~~~~---~~~~Dl~~~i~~l~~~~~---~~~i~lvGhSmGG~ial~ya~ 252 (578)
-+++-+|.| |-|-|--.++..+.. +-++|..+++...-+++| ..++++.|-|.+|..+-.+|.
T Consensus 108 ~~N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~ 187 (454)
T KOG1282|consen 108 YLNPYSWNKEANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQ 187 (454)
T ss_pred eeCCccccccccEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHH
Confidence 245555654 566664333322222 223566666554445665 578999999999965544443
Q ss_pred ----hcC----CCCCccEEEEEcC
Q 008093 253 ----EEG----EKTPVAGAAAICS 268 (578)
Q Consensus 253 ----~~p----~~~~V~~~Vlis~ 268 (578)
.+. ....++|+++=++
T Consensus 188 ~I~~~N~~~~~~~iNLkG~~IGNg 211 (454)
T KOG1282|consen 188 EILKGNKKCCKPNINLKGYAIGNG 211 (454)
T ss_pred HHHhccccccCCcccceEEEecCc
Confidence 321 1235777764433
|
|
| >PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins | Back alignment and domain information |
|---|
Probab=83.76 E-value=3 Score=43.88 Aligned_cols=43 Identities=23% Similarity=0.291 Sum_probs=33.5
Q ss_pred CCCcEEEEEEchHHHHHHHHHhhcCCC---CCccEEEEEcCCcchh
Q 008093 231 PKAPLFAIGTSIGANILVKYLGEEGEK---TPVAGAAAICSPWDLL 273 (578)
Q Consensus 231 ~~~~i~lvGhSmGG~ial~ya~~~p~~---~~V~~~Vlis~p~d~~ 273 (578)
+.+|+.+||||||+.+....+.+..+. ..|.-+++++.|....
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~ 263 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSD 263 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCC
Confidence 677999999999999988766554332 2478999999887654
|
|
| >PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE) | Back alignment and domain information |
|---|
Probab=83.72 E-value=4.3 Score=40.13 Aligned_cols=83 Identities=18% Similarity=0.189 Sum_probs=46.9
Q ss_pred CceEEEEeCCC-CCCCCCCCCCCCCCCchHHHHHHHHHHHHHC-CCCcEEEEEEchHHHHHHHHHhhcCC---C-CCccE
Q 008093 189 GWNVVVSNHRG-LGGVSITSDCFYNAGWTEDAREVIGYLHHEY-PKAPLFAIGTSIGANILVKYLGEEGE---K-TPVAG 262 (578)
Q Consensus 189 Gy~Vvv~D~RG-~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~-~~~~i~lvGhSmGG~ial~ya~~~p~---~-~~V~~ 262 (578)
|+++..++++. ++-........+...-.+-+..+.+.++... ...+++++|+|.||.++...+.+... . ..-..
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~ 81 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLS 81 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceE
Confidence 67888888887 2221111111122222233333444444322 56789999999999999887765422 1 12346
Q ss_pred EEEEcCCcc
Q 008093 263 AAAICSPWD 271 (578)
Q Consensus 263 ~Vlis~p~d 271 (578)
+|+++.|..
T Consensus 82 fVl~gnP~r 90 (225)
T PF08237_consen 82 FVLIGNPRR 90 (225)
T ss_pred EEEecCCCC
Confidence 788887643
|
A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands []. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* Length = 251 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 2e-09
Identities = 20/122 (16%), Positives = 41/122 (33%), Gaps = 10/122 (8%)
Query: 155 SKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSD-CFYNA 213
+ + P+ I+I G T S +I + + G + ++ G G SD F +
Sbjct: 22 NNPEKCPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADMYGHGK----SDGKFEDH 77
Query: 214 G---WTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270
W + V+ Y ++ G S G ++ E + + +
Sbjct: 78 TLFKWLTNILAVVDYAKKLDFVTDIYMAGHSQGGLSVMLAAAMERDI--IKALIPLSPAA 135
Query: 271 DL 272
+
Sbjct: 136 MI 137
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 Length = 305 | Back alignment and structure |
|---|
Score = 55.0 bits (132), Expect = 2e-08
Identities = 38/291 (13%), Positives = 80/291 (27%), Gaps = 61/291 (20%)
Query: 125 FRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTS--DSAASYIRHLV 182
R+++G + + ++ G D A +L
Sbjct: 12 LRVNNGQELHVWETPPKEN------------VPFKNNTILIASGFARRMDHFAGLAEYL- 58
Query: 183 FNTAKRGWNVVVSNHRGLGGVSITSDCFYN-AGWTEDAREVIGYLHHEYPKAPLFAIGTS 241
+ G++V + G+S S + V +L + + + I S
Sbjct: 59 ---STNGFHVFRYDSLHHVGLSSGSIDEFTMTTGKNSLCTVYHWLQTKGTQ-NIGLIAAS 114
Query: 242 IGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQ 301
+ A + + + + ++ +L R ++K DY
Sbjct: 115 LSARVAYEVISDL----ELSFLITAVGVVNL--------RDTLEKALGF-------DYLS 155
Query: 302 LHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLC 361
L ++EG K + D + S+ V N S+PL+
Sbjct: 156 LPIDELPNDLDFEGHKLGSEVFVRDCFE----------HHWDTLDSTLDKVANTSVPLIA 205
Query: 362 ISSLDDPVCTVEAIPWDECR------ANKNVVLATTWHGGHLAFFEGLTAA 406
++ +D + +E + L + H E L
Sbjct: 206 FTANNDDW-----VKQEEVYDMLAHIRTGHCKLYSLLGSSHD-LGENLVVL 250
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* Length = 270 | Back alignment and structure |
|---|
Score = 53.3 bits (128), Expect = 7e-08
Identities = 19/120 (15%), Positives = 41/120 (34%), Gaps = 8/120 (6%)
Query: 156 KDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAG- 214
+ +AI+ G T++ S +R + + V + G G + F N
Sbjct: 42 FGEIYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGHGD---SDGKFENMTV 98
Query: 215 --WTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272
EDA ++ Y+ + ++ +G + G + G + + + L
Sbjct: 99 LNEIEDANAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYPDL--IKKVVLLAPAATL 156
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} Length = 270 | Back alignment and structure |
|---|
Score = 47.1 bits (112), Expect = 6e-06
Identities = 23/114 (20%), Positives = 41/114 (35%), Gaps = 8/114 (7%)
Query: 160 TPIAIV-IPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTED 218
P+ ++ + G T + S R L AK G+ V + +G G + W
Sbjct: 39 GPVGVLLVHGFT-GTPHSM-RPLAEAYAKAGYTVCLPRLKGHGTHYEDMERTTFHDWVAS 96
Query: 219 AREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272
E G+L +F G S+G + + + + G I + D+
Sbjct: 97 VEEGYGWLKQRCQ--TIFVTGLSMGGTLTLYLAEHHPD---ICGIVPINAAVDI 145
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A Length = 251 | Back alignment and structure |
|---|
Score = 46.0 bits (109), Expect = 1e-05
Identities = 21/114 (18%), Positives = 35/114 (30%), Gaps = 10/114 (8%)
Query: 160 TPIAIV-IPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN--AGWT 216
T +V + T S + + G+ V V G G V W
Sbjct: 21 TDTGVVLLHAYT-GSPNDM-NFMARALQRSGYGVYVPLFSGHGTVEPLDILTKGNPDIWW 78
Query: 217 EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270
++ + ++ +Y K +F G S+G +K L SP
Sbjct: 79 AESSAAVAHMTAKYAK--VFVFGLSLGGIFAMKALETLPGI---TAGGVFSSPI 127
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 47.2 bits (111), Expect = 1e-05
Identities = 75/573 (13%), Positives = 144/573 (25%), Gaps = 178/573 (31%)
Query: 29 LIPISHYVLALSLLFVIV------IYNFLEFHFVEDLFS---GFRGSPVRLTFNSSSPIY 79
+I V LF + + FVE++ F SP++ S +
Sbjct: 54 IIMSKDAVSGTLRLFWTLLSKQEEMVQ----KFVEEVLRINYKFLMSPIKTEQRQPSMMT 109
Query: 80 DGVVSKCKIVHGRYLVTPWLSSPHIQTAFLHFFGRPPCFSYRRQ-LFRLSDG------GM 132
+ + R + + + R + RQ L L G+
Sbjct: 110 RMYIEQ----RDRLYNDNQVFAKY-------NVSRLQPYLKLRQALLELRPAKNVLIDGV 158
Query: 133 -------IALD----------------WL-MGSTG-PGDVF-HANNF---ISKDDTTP-- 161
+ALD WL + + P V I + T+
Sbjct: 159 LGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSD 218
Query: 162 IAIVIPGLTSDSAASYIRHLVFNTA-KRG-------WNVVVSNHRGLG-GVSITSDCFYN 212
+ I L S + +R L+ + + N N L + +T
Sbjct: 219 HSSNIK-LRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLT------ 271
Query: 213 AGWTEDAREVIGYLHHEYPKAP-----LFAIGTSIGANILVKYLGEEGEKTPVAGAAAIC 267
T ++V +L + ++L+KYL + P
Sbjct: 272 ---TRF-KQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPR--EVLTT 325
Query: 268 SPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDS 327
+P + I + + + NW+ + + +S
Sbjct: 326 NP--RRLS--IIAESIRDGL--------------------ATWDNWKHVNCDKLTTIIES 361
Query: 328 HATCLVGKFETVDTYYRNCSSSTYVGNVSIP--LLCISSLDDPVCTVEAIPWDECRANKN 385
L + + S + + IP LL + D V +
Sbjct: 362 SLNVL--EPAEYRKMFDRL--SVFPPSAHIPTILLSLIWFDVIKSDVMVV---------- 407
Query: 386 VVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSSPYMHVRKKV-QEPGLH----- 439
+ + E + S Y+ ++ K+ E LH
Sbjct: 408 -----------VNKLHKYSLVEKQP----KESTISIPSI-YLELKVKLENEYALHRSIVD 451
Query: 440 -LSTESSIDQGPYLNVSEDGMVAAVGNEQTRNSIVGDHQTNSEMVLDTEQDEQLT----- 493
+ + D + D S +G H N E E+
Sbjct: 452 HYNIPKTFDSDDLIPPYLDQYFY---------SHIGHHLKNIEH---PERMTLFRMVFLD 499
Query: 494 ----GAKSDAVPNTDRTCEPPANTPDT--ELRN 520
K + + + +T +L+
Sbjct: 500 FRFLEQK---IRHDSTAWNASGSILNTLQQLKF 529
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} Length = 270 | Back alignment and structure |
|---|
Score = 45.8 bits (108), Expect = 2e-05
Identities = 27/164 (16%), Positives = 48/164 (29%)
Query: 157 DDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWT 216
D P I + G SD + + A G + ++ G G + W
Sbjct: 34 QDERPTCIWLGGYRSDMTGTKALEMDDLAASLGVGAIRFDYSGHGASGGAFRDGTISRWL 93
Query: 217 EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGD 276
E+A V+ + E ++G I ++ + T V+G I D
Sbjct: 94 EEALAVLDHFKPEKAILVGSSMGGWIALRLIQELKARHDNPTQVSGMVLIAPAPDFTSDL 153
Query: 277 RFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSR 320
++ + EP A E + +R
Sbjct: 154 IEPLLGDRERAELAENGYFEEVSEYSPEPNIFTRALMEDGRANR 197
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} Length = 176 | Back alignment and structure |
|---|
Score = 44.5 bits (105), Expect = 2e-05
Identities = 16/86 (18%), Positives = 26/86 (30%), Gaps = 3/86 (3%)
Query: 161 PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAR 220
I+ G S A + L + GW + L G +
Sbjct: 5 GHCILAHGFESGPDALKVTALAEVAERLGWTHERPDFTDLDARRDLGQLGDVRGRLQRLL 64
Query: 221 EVIGYLHHEYPKAPLFAIGTSIGANI 246
E+ K P+ G+S+G+ I
Sbjct: 65 EIA---RAATEKGPVVLAGSSLGSYI 87
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} Length = 354 | Back alignment and structure |
|---|
Score = 45.7 bits (107), Expect = 3e-05
Identities = 21/131 (16%), Positives = 43/131 (32%), Gaps = 21/131 (16%)
Query: 142 TGPGDVFHANNFISKDDTTPIAIVIPGLTSD--------------SAASYIRHLVFNTAK 187
P D+ + +++PG S + Y + +V A+
Sbjct: 32 DSPYDIISLHKVNLIGGGNDAVLILPGTWSSGEQLVTISWNGVHYTIPDYRKSIVLYLAR 91
Query: 188 RGWNVVVSNHRGLGGVSITSDCFYNAG-------WTEDAREVIGYLHHEYPKAPLFAIGT 240
G+NV ++R D + W D +EV+ ++ + + ++ G
Sbjct: 92 NGFNVYTIDYRTHYVPPFLKDRQLSFTANWGWSTWISDIKEVVSFIKRDSGQERIYLAGE 151
Query: 241 SIGANILVKYL 251
S G + Y
Sbjct: 152 SFGGIAALNYS 162
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 Length = 386 | Back alignment and structure |
|---|
Score = 43.4 bits (102), Expect = 1e-04
Identities = 35/259 (13%), Positives = 66/259 (25%), Gaps = 53/259 (20%)
Query: 140 GSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRG 199
G P V P I++ GL +S + RG + G
Sbjct: 136 GIPMPVYVRIPEG----PGPHPAVIMLGGL--ESTKEESFQMENLVLDRGMATATFDGPG 189
Query: 200 LGGVSITSDCFYNAGWTEDAREVIGYL--HHEYPKAPLFAIGTSIGANILVKYLGEEGEK 257
G + + + + V+ L + +G S+G N +K E
Sbjct: 190 QGEMFEYKRIAGD--YEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAACEPR- 246
Query: 258 TPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIK 317
+A + DL D L ++ + + + A+LH +
Sbjct: 247 --LAACISWGGFSDLDYWDLET--PLTKESWKYVSKVDTLEEARLHVHAALETRD----- 297
Query: 318 KSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPW 377
+ ++ P + + D V
Sbjct: 298 ---------------------------------VLSQIACPTYILHGVHDEVPLSFVDTV 324
Query: 378 DECRANKNVVLATTWHGGH 396
E +++ L G H
Sbjct: 325 LELVPAEHLNLVVEKDGDH 343
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* Length = 303 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 7e-04
Identities = 28/201 (13%), Positives = 64/201 (31%), Gaps = 32/201 (15%)
Query: 186 AKRGWNVVVSNHRGLGGVSITSDCFYNAGW---TEDAREVIGYLHHEYPKAPLFAIGTSI 242
V +H G G S + + D + + + +YP P+F +G S+
Sbjct: 66 MGLDLLVFAHDHVGHGQ-SEGERMVVS-DFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSM 123
Query: 243 GANILVKYLGEEGEKTPVAG----AAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQD 298
G I + E AG + + + + + + +++ + L+ G D
Sbjct: 124 GGAIAILTAAERPGH--FAGMVLISPLVLANPESATTFKVLAAKVLNSVLPN-LSSGPID 180
Query: 299 YAQL-HEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYV----G 353
+ L + ++S V + ++ + V
Sbjct: 181 SSVLSRNKTE--------------VDIYNSDPLICRAGL-KVCFGIQLLNAVSRVERALP 225
Query: 354 NVSIPLLCISSLDDPVCTVEA 374
+++P L + D +C +
Sbjct: 226 KLTVPFLLLQGSADRLCDSKG 246
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} Length = 342 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 9e-04
Identities = 19/88 (21%), Positives = 31/88 (35%), Gaps = 8/88 (9%)
Query: 186 AKRGWNVVVSNHRGLGGVSITSDCFYNAGW---TEDAREVIGYLHHEYPKAPLFAIGTSI 242
V +H G G S + + D + + + +YP P+F +G S+
Sbjct: 84 MGLDLLVFAHDHVGHGQ-SEGERMVVS-DFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSM 141
Query: 243 GANILVKYLGEEGEKTPVAGAAAICSPW 270
G I + E AG + SP
Sbjct: 142 GGAIAILTAAERPGH--FAG-MVLISPL 166
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 578 | |||
| 3ia2_A | 271 | Arylesterase; alpha-beta hydrolase fold, transitio | 99.93 | |
| 3pe6_A | 303 | Monoglyceride lipase; alpha-beta hydrolase fold, 2 | 99.93 | |
| 1zoi_A | 276 | Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo | 99.92 | |
| 1a8q_A | 274 | Bromoperoxidase A1; haloperoxidase, oxidoreductase | 99.92 | |
| 1a8s_A | 273 | Chloroperoxidase F; haloperoxidase, oxidoreductase | 99.92 | |
| 1a88_A | 275 | Chloroperoxidase L; haloperoxidase, oxidoreductase | 99.92 | |
| 3fob_A | 281 | Bromoperoxidase; structural genomics, IDP00046, ba | 99.92 | |
| 3hju_A | 342 | Monoglyceride lipase; alpha/beta hydrolase, hydrol | 99.92 | |
| 3om8_A | 266 | Probable hydrolase; structural genomics, PSI-2, pr | 99.92 | |
| 3v48_A | 268 | Aminohydrolase, putative aminoacrylate hydrolase R | 99.92 | |
| 4fbl_A | 281 | LIPS lipolytic enzyme; thermostable, structural ge | 99.92 | |
| 3pfb_A | 270 | Cinnamoyl esterase; alpha/beta hydrolase fold, hyd | 99.92 | |
| 2wtm_A | 251 | EST1E; hydrolase; 1.60A {Clostridium proteoclastic | 99.91 | |
| 4f0j_A | 315 | Probable hydrolytic enzyme; alpha/beta hydrolase f | 99.91 | |
| 2ocg_A | 254 | Valacyclovir hydrolase; alpha beta hydrolase fold; | 99.9 | |
| 1brt_A | 277 | Bromoperoxidase A2; haloperoxidase, oxidoreductase | 99.9 | |
| 2xua_A | 266 | PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate | 99.9 | |
| 3llc_A | 270 | Putative hydrolase; structural genomics, joint cen | 99.9 | |
| 2yys_A | 286 | Proline iminopeptidase-related protein; TTHA1809, | 99.9 | |
| 1tqh_A | 247 | Carboxylesterase precursor; tetrahedral intermedia | 99.9 | |
| 3trd_A | 208 | Alpha/beta hydrolase; cellular processes; 1.50A {C | 99.9 | |
| 1hkh_A | 279 | Gamma lactamase; hydrolase, alpha/beta hydrolase, | 99.9 | |
| 1k8q_A | 377 | Triacylglycerol lipase, gastric; APHA beta hydrola | 99.9 | |
| 3u1t_A | 309 | DMMA haloalkane dehalogenase; alpha/beta-hydrolase | 99.9 | |
| 1q0r_A | 298 | RDMC, aclacinomycin methylesterase; anthracycline, | 99.89 | |
| 2i3d_A | 249 | AGR_C_3351P, hypothetical protein ATU1826; structu | 99.89 | |
| 1tht_A | 305 | Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1. | 99.89 | |
| 2fuk_A | 220 | XC6422 protein; A/B hydrolase, structural genomics | 99.89 | |
| 3g9x_A | 299 | Haloalkane dehalogenase; alpha/beta hydrolase, hel | 99.89 | |
| 3r40_A | 306 | Fluoroacetate dehalogenase; FACD, defluorinase, al | 99.88 | |
| 2xmz_A | 269 | Hydrolase, alpha/beta hydrolase fold family; menaq | 99.88 | |
| 3i1i_A | 377 | Homoserine O-acetyltransferase; structural genomic | 99.88 | |
| 3dkr_A | 251 | Esterase D; alpha beta hydrolase, mechanism, catal | 99.88 | |
| 3hss_A | 293 | Putative bromoperoxidase; alpha beta hydrolase, ox | 99.88 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 99.88 | |
| 2r11_A | 306 | Carboxylesterase NP; 2632844, putative hydrolase, | 99.88 | |
| 1mtz_A | 293 | Proline iminopeptidase; alpha-beta hydrolase, CAP | 99.88 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.88 | |
| 2puj_A | 286 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; | 99.88 | |
| 3r0v_A | 262 | Alpha/beta hydrolase fold protein; structural geno | 99.88 | |
| 3vdx_A | 456 | Designed 16NM tetrahedral protein CAGE containing | 99.88 | |
| 3oos_A | 278 | Alpha/beta hydrolase family protein; APC67239.0, p | 99.88 | |
| 3nwo_A | 330 | PIP, proline iminopeptidase; structural genomics, | 99.88 | |
| 4dnp_A | 269 | DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petu | 99.88 | |
| 3fsg_A | 272 | Alpha/beta superfamily hydrolase; PF00561, MCSG, P | 99.88 | |
| 3h04_A | 275 | Uncharacterized protein; protein with unknown func | 99.88 | |
| 3qvm_A | 282 | OLEI00960; structural genomics, PSI-biology, midwe | 99.87 | |
| 4g9e_A | 279 | AHL-lactonase, alpha/beta hydrolase fold protein; | 99.87 | |
| 1iup_A | 282 | META-cleavage product hydrolase; aromatic compound | 99.87 | |
| 2wue_A | 291 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas | 99.87 | |
| 3kda_A | 301 | CFTR inhibitory factor (CIF); alpha/beta hydrolase | 99.87 | |
| 1ehy_A | 294 | Protein (soluble epoxide hydrolase); alpha/beta hy | 99.87 | |
| 3bdi_A | 207 | Uncharacterized protein TA0194; NP_393672.1, predi | 99.87 | |
| 2cjp_A | 328 | Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tu | 99.87 | |
| 3afi_E | 316 | Haloalkane dehalogenase; A/B-hydrolase, hydrolase; | 99.87 | |
| 3qit_A | 286 | CURM TE, polyketide synthase; thioesterase, alpha/ | 99.87 | |
| 3dqz_A | 258 | Alpha-hydroxynitrIle lyase-like protein; A/B-hydrl | 99.87 | |
| 1c4x_A | 285 | BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di | 99.87 | |
| 2o2g_A | 223 | Dienelactone hydrolase; YP_324580.1, structural ge | 99.87 | |
| 3kxp_A | 314 | Alpha-(N-acetylaminomethylene)succinic acid hydrol | 99.87 | |
| 3bf7_A | 255 | Esterase YBFF; thioesterase, helical CAP, hydrolas | 99.87 | |
| 2qmq_A | 286 | Protein NDRG2, protein NDR2; alpha/beta-hydrolases | 99.87 | |
| 3sty_A | 267 | Methylketone synthase 1; alpha/beta hydrolase, dec | 99.87 | |
| 2xt0_A | 297 | Haloalkane dehalogenase; hydrolase, alpha-beta hyd | 99.86 | |
| 3bwx_A | 285 | Alpha/beta hydrolase; YP_496220.1, joint center fo | 99.86 | |
| 1imj_A | 210 | CIB, CCG1-interacting factor B; alpha/beta hydrola | 99.86 | |
| 3b12_A | 304 | Fluoroacetate dehalogenase; dehalogease, hydrolase | 99.77 | |
| 2hdw_A | 367 | Hypothetical protein PA2218; alpha/beta hydrolase | 99.86 | |
| 2pbl_A | 262 | Putative esterase/lipase/thioesterase; alpha/beta- | 99.86 | |
| 2pl5_A | 366 | Homoserine O-acetyltransferase; alpha/beta hydrola | 99.86 | |
| 1u2e_A | 289 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 99.86 | |
| 2jbw_A | 386 | Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine | 99.86 | |
| 3c6x_A | 257 | Hydroxynitrilase; atomic resolution, hydroxynitril | 99.86 | |
| 1b6g_A | 310 | Haloalkane dehalogenase; hydrolase, alpha/beta-hyd | 99.86 | |
| 3rm3_A | 270 | MGLP, thermostable monoacylglycerol lipase; alpha/ | 99.86 | |
| 1mj5_A | 302 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; | 99.85 | |
| 3ibt_A | 264 | 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, | 99.85 | |
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 99.85 | |
| 2e3j_A | 356 | Epoxide hydrolase EPHB; epoxide hydrolase B, struc | 99.85 | |
| 1j1i_A | 296 | META cleavage compound hydrolase; carbazole degrad | 99.85 | |
| 1wm1_A | 317 | Proline iminopeptidase; complex with inhibitor, hy | 99.85 | |
| 2qvb_A | 297 | Haloalkane dehalogenase 3; RV2579, alpha-beta hydr | 99.85 | |
| 2rau_A | 354 | Putative esterase; NP_343859.1, putative lipase, s | 99.85 | |
| 3e0x_A | 245 | Lipase-esterase related protein; APC60309, clostri | 99.85 | |
| 2wfl_A | 264 | Polyneuridine-aldehyde esterase; alkaloid metaboli | 99.85 | |
| 1r3d_A | 264 | Conserved hypothetical protein VC1974; structural | 99.84 | |
| 2qjw_A | 176 | Uncharacterized protein XCC1541; putative hydrolas | 99.84 | |
| 1zi8_A | 236 | Carboxymethylenebutenolidase; alpha and beta prote | 99.84 | |
| 3fnb_A | 405 | Acylaminoacyl peptidase SMU_737; alpha-beta-alpha | 99.84 | |
| 3fcy_A | 346 | Xylan esterase 1; alpha/beta hydrolase, carbohydra | 99.84 | |
| 1azw_A | 313 | Proline iminopeptidase; aminopeptidase, serine pro | 99.84 | |
| 1xkl_A | 273 | SABP2, salicylic acid-binding protein 2; alpha-bet | 99.84 | |
| 3p2m_A | 330 | Possible hydrolase; alpha/beta hydrolase superfami | 99.84 | |
| 2wj6_A | 276 | 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxid | 99.84 | |
| 2b61_A | 377 | Homoserine O-acetyltransferase; acyl-enzyme, aspar | 99.84 | |
| 3ksr_A | 290 | Putative serine hydrolase; catalytic triad, struct | 99.83 | |
| 3l80_A | 292 | Putative uncharacterized protein SMU.1393C; alpha/ | 99.83 | |
| 3bxp_A | 277 | Putative lipase/esterase; putative carboxylesteras | 99.83 | |
| 1ufo_A | 238 | Hypothetical protein TT1662; alpha-beta fold, hydr | 99.83 | |
| 1l7a_A | 318 | Cephalosporin C deacetylase; structural genomics, | 99.83 | |
| 3fla_A | 267 | RIFR; alpha-beta hydrolase thioesterase, hydrolase | 99.83 | |
| 3hxk_A | 276 | Sugar hydrolase; alpha-beta protein., structural g | 99.83 | |
| 3f67_A | 241 | Putative dienelactone hydrolase; alpha-beta-alpha | 99.83 | |
| 1pja_A | 302 | Palmitoyl-protein thioesterase 2 precursor; hydrol | 99.83 | |
| 1jfr_A | 262 | Lipase; serine hydrolase; 1.90A {Streptomyces exfo | 99.83 | |
| 2psd_A | 318 | Renilla-luciferin 2-monooxygenase; alpha/beta-hydr | 99.82 | |
| 2y6u_A | 398 | Peroxisomal membrane protein LPX1; hydrolase, puta | 99.82 | |
| 1vlq_A | 337 | Acetyl xylan esterase; TM0077, structural genomics | 99.82 | |
| 2vat_A | 444 | Acetyl-COA--deacetylcephalosporin C acetyltransfer | 99.82 | |
| 3qyj_A | 291 | ALR0039 protein; alpha/beta fold, hydrolase; 1.78A | 99.82 | |
| 4i19_A | 388 | Epoxide hydrolase; structural genomics, PSI-biolog | 99.81 | |
| 3bjr_A | 283 | Putative carboxylesterase; structural genomics, jo | 99.81 | |
| 3vis_A | 306 | Esterase; alpha/beta-hydrolase fold, polyethylene | 99.8 | |
| 4ao6_A | 259 | Esterase; hydrolase, thermo label; 1.60A {Unidenti | 99.8 | |
| 2q0x_A | 335 | Protein DUF1749, uncharacterized protein; alpha/be | 99.8 | |
| 3c5v_A | 316 | PME-1, protein phosphatase methylesterase 1; demet | 99.8 | |
| 3mve_A | 415 | FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/ | 99.8 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.8 | |
| 2c7b_A | 311 | Carboxylesterase, ESTE1; carboxyesterase, thermoph | 99.8 | |
| 4fle_A | 202 | Esterase; structural genomics, PSI-biology, northe | 99.79 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.79 | |
| 1fj2_A | 232 | Protein (acyl protein thioesterase 1); alpha/beta | 99.79 | |
| 1isp_A | 181 | Lipase; alpha/beta hydrolase fold, hydrolase; 1.30 | 99.78 | |
| 4e15_A | 303 | Kynurenine formamidase; alpha/beta hydrolase fold, | 99.78 | |
| 2qs9_A | 194 | Retinoblastoma-binding protein 9; B5T overexpresse | 99.78 | |
| 1uxo_A | 192 | YDEN protein; hydrolase, A/B hydrolase, esterase, | 99.78 | |
| 3qmv_A | 280 | Thioesterase, REDJ; alpha/beta hydrolase fold, hyd | 99.77 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.77 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.77 | |
| 1qlw_A | 328 | Esterase; anisotropic refinement, atomic resolutio | 99.76 | |
| 3g02_A | 408 | Epoxide hydrolase; alpha/beta hydrolase fold, enan | 99.76 | |
| 3hlk_A | 446 | Acyl-coenzyme A thioesterase 2, mitochondrial; alp | 99.75 | |
| 2zsh_A | 351 | Probable gibberellin receptor GID1L1; plant hormon | 99.75 | |
| 2r8b_A | 251 | AGR_C_4453P, uncharacterized protein ATU2452; APC6 | 99.75 | |
| 1vkh_A | 273 | Putative serine hydrolase; structural genomics, jo | 99.75 | |
| 1auo_A | 218 | Carboxylesterase; hydrolase; 1.80A {Pseudomonas fl | 99.75 | |
| 3k6k_A | 322 | Esterase/lipase; alpha/beta hydrolase fold; 2.20A | 99.75 | |
| 3ain_A | 323 | 303AA long hypothetical esterase; carboxylesterase | 99.75 | |
| 3cn9_A | 226 | Carboxylesterase; alpha/beta hydrolase fold super- | 99.75 | |
| 2wir_A | 313 | Pesta, alpha/beta hydrolase fold-3 domain protein; | 99.74 | |
| 3k2i_A | 422 | Acyl-coenzyme A thioesterase 4; alpha/beta hydrola | 99.74 | |
| 1lzl_A | 323 | Heroin esterase; alpha/beta hydrolase; 1.30A {Rhod | 99.74 | |
| 3i2k_A | 587 | Cocaine esterase; alpha/beta hydrolase, hydrolase; | 99.74 | |
| 2h1i_A | 226 | Carboxylesterase; structural genomics, PSI-2, prot | 99.74 | |
| 2hm7_A | 310 | Carboxylesterase; alpha/beta hydrolase fold, hydro | 99.74 | |
| 1mpx_A | 615 | Alpha-amino acid ester hydrolase; alpha/beta hydro | 99.74 | |
| 1jkm_A | 361 | Brefeldin A esterase; serine hydrolase, degradatio | 99.74 | |
| 1jji_A | 311 | Carboxylesterase; alpha-beta hydrolase fold, hydro | 99.73 | |
| 2o7r_A | 338 | CXE carboxylesterase; alpha/beta hydrolase; 1.40A | 99.73 | |
| 3bdv_A | 191 | Uncharacterized protein DUF1234; DUF1234 family pr | 99.72 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.72 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.72 | |
| 3ga7_A | 326 | Acetyl esterase; phosphoserine, IDP00896, hydrolas | 99.72 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.72 | |
| 2fx5_A | 258 | Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pse | 99.72 | |
| 3og9_A | 209 | Protein YAHD A copper inducible hydrolase; alpha/b | 99.71 | |
| 3lcr_A | 319 | Tautomycetin biosynthetic PKS; alpha-beta hydrolas | 99.7 | |
| 2b9v_A | 652 | Alpha-amino acid ester hydrolase; catalytic triad, | 99.7 | |
| 3fak_A | 322 | Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Unc | 99.7 | |
| 4hvt_A | 711 | Ritya.17583.B, post-proline cleaving enzyme; ssgci | 99.7 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.7 | |
| 3d7r_A | 326 | Esterase; alpha/beta fold, hydrolase; 2.01A {Staph | 99.69 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.69 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.69 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.69 | |
| 3e4d_A | 278 | Esterase D; S-formylglutathione hydrolase, hydrola | 99.69 | |
| 3b5e_A | 223 | MLL8374 protein; NP_108484.1, carboxylesterase, st | 99.68 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 99.68 | |
| 1kez_A | 300 | Erythronolide synthase; polyketide synthase, modul | 99.67 | |
| 4ezi_A | 377 | Uncharacterized protein; alpha-beta hydrolases fol | 99.67 | |
| 3i6y_A | 280 | Esterase APC40077; lipase, structural genomics, PS | 99.67 | |
| 3ebl_A | 365 | Gibberellin receptor GID1; alpha/beta hydrolase, l | 99.66 | |
| 3fcx_A | 282 | FGH, esterase D, S-formylglutathione hydrolase; re | 99.66 | |
| 1lns_A | 763 | X-prolyl dipeptidyl aminopetidase; alpha beta hydr | 99.66 | |
| 3ils_A | 265 | PKS, aflatoxin biosynthesis polyketide synthase; A | 99.65 | |
| 2k2q_B | 242 | Surfactin synthetase thioesterase subunit; A/B-hyd | 99.65 | |
| 2qru_A | 274 | Uncharacterized protein; alpha/beta-hydrolase, str | 99.65 | |
| 3u0v_A | 239 | Lysophospholipase-like protein 1; alpha, beta hydr | 99.65 | |
| 3qh4_A | 317 | Esterase LIPW; structural genomics, ssgcid, seattl | 99.65 | |
| 3doh_A | 380 | Esterase; alpha-beta hydrolase, beta sheet; 2.60A | 99.63 | |
| 3lp5_A | 250 | Putative cell surface hydrolase; structural genom | 99.63 | |
| 3fle_A | 249 | SE_1780 protein; structural genomics, APC61035.1, | 99.63 | |
| 1tca_A | 317 | Lipase; hydrolase(carboxylic esterase); HET: NAG; | 99.62 | |
| 2uz0_A | 263 | Esterase, tributyrin esterase; alpha/beta hydrolas | 99.62 | |
| 3ls2_A | 280 | S-formylglutathione hydrolase; psychrophilic organ | 99.62 | |
| 4h0c_A | 210 | Phospholipase/carboxylesterase; PSI-biology, midwe | 99.6 | |
| 3iii_A | 560 | COCE/NOND family hydrolase; structural genomics, c | 99.59 | |
| 3d0k_A | 304 | Putative poly(3-hydroxybutyrate) depolymerase LPQ; | 99.58 | |
| 3ds8_A | 254 | LIN2722 protein; unkonwn function, structural geno | 99.57 | |
| 3d59_A | 383 | Platelet-activating factor acetylhydrolase; secret | 99.56 | |
| 3h2g_A | 397 | Esterase; xanthomonas oryzae PV. oryzae, cell WALL | 99.55 | |
| 1ycd_A | 243 | Hypothetical 27.3 kDa protein in AAP1-SMF2 interge | 99.55 | |
| 4b6g_A | 283 | Putative esterase; hydrolase, formaldehyde detoxif | 99.54 | |
| 1jjf_A | 268 | Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-x | 99.52 | |
| 2hfk_A | 319 | Pikromycin, type I polyketide synthase pikaiv; alp | 99.51 | |
| 4fhz_A | 285 | Phospholipase/carboxylesterase; alpha/beta hydrola | 99.5 | |
| 3guu_A | 462 | Lipase A; protein structure, hydrolase; HET: 1PE; | 99.49 | |
| 1ei9_A | 279 | Palmitoyl protein thioesterase 1; alpha/beta hydro | 99.47 | |
| 1jmk_C | 230 | SRFTE, surfactin synthetase; thioesterase, non-rib | 99.44 | |
| 2cb9_A | 244 | Fengycin synthetase; thioesterase, non-ribosomal p | 99.42 | |
| 3tej_A | 329 | Enterobactin synthase component F; nonribosomal pe | 99.41 | |
| 3icv_A | 316 | Lipase B, CALB; circular permutation, cleavage on | 99.38 | |
| 1w52_X | 452 | Pancreatic lipase related protein 2; detergent, cl | 99.35 | |
| 1sfr_A | 304 | Antigen 85-A; alpha/beta hydrolase, structural gen | 99.34 | |
| 1bu8_A | 452 | Protein (pancreatic lipase related protein 2); hyd | 99.34 | |
| 1r88_A | 280 | MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBP | 99.34 | |
| 3tjm_A | 283 | Fatty acid synthase; thioesterase domain, fatty ac | 99.33 | |
| 1dqz_A | 280 | 85C, protein (antigen 85-C); fibronectin, structur | 99.32 | |
| 4f21_A | 246 | Carboxylesterase/phospholipase family protein; str | 99.32 | |
| 1gpl_A | 432 | RP2 lipase; serine esterase, hydrolase, lipid degr | 99.31 | |
| 2x5x_A | 342 | PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE | 99.3 | |
| 3nuz_A | 398 | Putative acetyl xylan esterase; structural genomic | 99.3 | |
| 3g8y_A | 391 | SUSD/RAGB-associated esterase-like protein; struct | 99.29 | |
| 1ys1_X | 320 | Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor h | 99.29 | |
| 1ex9_A | 285 | Lactonizing lipase; alpha-beta hydrolase fold, pho | 99.28 | |
| 1hpl_A | 449 | Lipase; hydrolase(carboxylic esterase); 2.30A {Equ | 99.25 | |
| 3n2z_B | 446 | Lysosomal Pro-X carboxypeptidase; alpha/beta hydro | 99.23 | |
| 1rp1_A | 450 | Pancreatic lipase related protein 1; hydrolase, li | 99.23 | |
| 1gkl_A | 297 | Endo-1,4-beta-xylanase Y; hydrolase, esterase fami | 99.23 | |
| 2zyr_A | 484 | Lipase, putative; fatty acid, hydrolase; HET: 1PE; | 99.21 | |
| 2hih_A | 431 | Lipase 46 kDa form; A1 phospholipase, phospholipid | 99.03 | |
| 2dst_A | 131 | Hypothetical protein TTHA1544; conserved hypotheti | 99.02 | |
| 2dsn_A | 387 | Thermostable lipase; T1 lipase, hydrolase; 1.50A { | 98.98 | |
| 2qm0_A | 275 | BES; alpha-beta structure, structural genomics, PS | 98.84 | |
| 3c8d_A | 403 | Enterochelin esterase; alpha-beta-alpha sandwich, | 98.8 | |
| 2px6_A | 316 | Thioesterase domain; thioesaterse domain, orlistat | 98.68 | |
| 1qe3_A | 489 | PNB esterase, para-nitrobenzyl esterase; alpha-bet | 98.45 | |
| 2ogt_A | 498 | Thermostable carboxylesterase EST50; alpha/beta hy | 98.44 | |
| 4g4g_A | 433 | 4-O-methyl-glucuronoyl methylesterase; alpha/beta | 98.3 | |
| 2gzs_A | 278 | IROE protein; enterobactin, salmochelin, DFP, hydr | 98.11 | |
| 3pic_A | 375 | CIP2; alpha/beta hydrolase fold, glucuronoyl ester | 98.1 | |
| 4fol_A | 299 | FGH, S-formylglutathione hydrolase; D-type esteras | 98.08 | |
| 2h7c_A | 542 | Liver carboxylesterase 1; enzyme, cholesteryl este | 98.05 | |
| 2fj0_A | 551 | JuvenIle hormone esterase; manduca sexta, alpha-be | 98.04 | |
| 2ha2_A | 543 | ACHE, acetylcholinesterase; hydrolase fold, serine | 98.01 | |
| 1ea5_A | 537 | ACHE, acetylcholinesterase; hydrolase, serine hydr | 98.01 | |
| 1p0i_A | 529 | Cholinesterase; serine hydrolase, butyrate, hydrol | 97.97 | |
| 1ukc_A | 522 | ESTA, esterase; fungi, A/B hydrolase fold, acetylc | 97.96 | |
| 3gff_A | 331 | IROE-like serine hydrolase; NP_718593.1, structura | 97.83 | |
| 2d81_A | 318 | PHB depolymerase; alpha/beta hydrolase fold, circu | 97.76 | |
| 1dx4_A | 585 | ACHE, acetylcholinesterase; hydrolase, serine este | 97.75 | |
| 1tib_A | 269 | Lipase; hydrolase(carboxylic esterase); 1.84A {The | 97.7 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 97.56 | |
| 1whs_A | 255 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 97.52 | |
| 4ebb_A | 472 | Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2 | 97.5 | |
| 1thg_A | 544 | Lipase; hydrolase(carboxylic esterase); HET: NAG N | 97.47 | |
| 1llf_A | 534 | Lipase 3; candida cylindracea cholesterol esterase | 97.45 | |
| 1tia_A | 279 | Lipase; hydrolase(carboxylic esterase); 2.10A {Pen | 97.42 | |
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 97.4 | |
| 3bix_A | 574 | Neuroligin-1, neuroligin I; esterase domain, alpha | 97.17 | |
| 2bce_A | 579 | Cholesterol esterase; hydrolase, serine esterase, | 97.15 | |
| 1tgl_A | 269 | Triacyl-glycerol acylhydrolase; carboxylic esteras | 96.62 | |
| 1lgy_A | 269 | Lipase, triacylglycerol lipase; hydrolase (carboxy | 96.45 | |
| 1gxs_A | 270 | P-(S)-hydroxymandelonitrIle lyase chain A; inhibit | 96.29 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 96.27 | |
| 1cpy_A | 421 | Serine carboxypeptidase; hydrolase (carboxypeptida | 96.12 | |
| 1uwc_A | 261 | Feruloyl esterase A; hydrolase, serine esterase, x | 96.07 | |
| 3hc7_A | 254 | Gene 12 protein, GP12; alpha/beta sandwich, cell a | 95.96 | |
| 4az3_A | 300 | Lysosomal protective protein 32 kDa chain; hydrola | 95.92 | |
| 3ngm_A | 319 | Extracellular lipase; secret lipase, hydrolase; 2. | 95.57 | |
| 1g66_A | 207 | Acetyl xylan esterase II; serine hydrolase, acetyl | 95.47 | |
| 1qoz_A | 207 | AXE, acetyl xylan esterase; hydrolase, xylan degra | 95.33 | |
| 3qpa_A | 197 | Cutinase; alpha-beta hydrolase fold, esterase, hyd | 95.07 | |
| 3o0d_A | 301 | YALI0A20350P, triacylglycerol lipase; alpha/beta-h | 95.0 | |
| 3g7n_A | 258 | Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A | 94.97 | |
| 3uue_A | 279 | LIP1, secretory lipase (family 3); LID-domain, hyd | 94.83 | |
| 3dcn_A | 201 | Cutinase, cutin hydrolase; catalytic triad, secret | 94.2 | |
| 3aja_A | 302 | Putative uncharacterized protein; alpha-beta hydro | 94.14 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 93.82 | |
| 3qpd_A | 187 | Cutinase 1; alpha-beta hydrolase fold, esterase, h | 93.77 | |
| 2czq_A | 205 | Cutinase-like protein; alpha/beta hydrolase fold, | 93.21 | |
| 2ory_A | 346 | Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Ph | 86.82 | |
| 2yij_A | 419 | Phospholipase A1-iigamma; hydrolase; 2.00A {Arabid | 83.64 | |
| 1whs_B | 153 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 80.07 |
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-25 Score=223.45 Aligned_cols=260 Identities=13% Similarity=0.122 Sum_probs=153.6
Q ss_pred EEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCC
Q 008093 124 LFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGV 203 (578)
Q Consensus 124 ~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S 203 (578)
.+++.||..+.+.... +.++|||+||++++ ...| ..++..|.++||+|+++|+||||.|
T Consensus 2 ~~~~~~g~~l~y~~~G-------------------~g~~vvllHG~~~~-~~~w-~~~~~~l~~~g~~vi~~D~~G~G~S 60 (271)
T 3ia2_A 2 TFVAKDGTQIYFKDWG-------------------SGKPVLFSHGWLLD-ADMW-EYQMEYLSSRGYRTIAFDRRGFGRS 60 (271)
T ss_dssp EEECTTSCEEEEEEES-------------------SSSEEEEECCTTCC-GGGG-HHHHHHHHTTTCEEEEECCTTSTTS
T ss_pred eEEcCCCCEEEEEccC-------------------CCCeEEEECCCCCc-HHHH-HHHHHHHHhCCceEEEecCCCCccC
Confidence 4678899998775431 23568999999654 4445 6788889889999999999999999
Q ss_pred CCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhc-CCCCCccEEEEEcCCcchhhh----hHH
Q 008093 204 SITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEE-GEKTPVAGAAAICSPWDLLIG----DRF 278 (578)
Q Consensus 204 ~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~-p~~~~V~~~Vlis~p~d~~~~----~~~ 278 (578)
+..........+.+|+.++++++. ..+++++||||||.+++.+++.+ ++ +|+++|++++....... ...
T Consensus 61 ~~~~~~~~~~~~a~d~~~~l~~l~----~~~~~lvGhS~GG~~~~~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~ 134 (271)
T 3ia2_A 61 DQPWTGNDYDTFADDIAQLIEHLD----LKEVTLVGFSMGGGDVARYIARHGSA--RVAGLVLLGAVTPLFGQKPDYPQG 134 (271)
T ss_dssp CCCSSCCSHHHHHHHHHHHHHHHT----CCSEEEEEETTHHHHHHHHHHHHCST--TEEEEEEESCCCSBCBCBTTBTTS
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhC----CCCceEEEEcccHHHHHHHHHHhCCc--ccceEEEEccCCccccCCCCCccc
Confidence 754332222345577777777663 45899999999999888888776 66 89999999863221100 000
Q ss_pred HhhHHHHHHHHHHHH---HhHHHHHhhhcccc-cccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCC
Q 008093 279 IGRRLIQKIYDRALT---IGLQDYAQLHEPRY-SRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGN 354 (578)
Q Consensus 279 l~~~~~~~~~~~~l~---~~l~~~~~~~~~~l-~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~ 354 (578)
........+...... ..+........... ....... ... ..+.................+...+....+.+
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 209 (271)
T 3ia2_A 135 VPLDVFARFKTELLKDRAQFISDFNAPFYGINKGQVVSQG-VQT----QTLQIALLASLKATVDCVTAFAETDFRPDMAK 209 (271)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGTCCCCHH-HHH----HHHHHHHHSCHHHHHHHHHHHHHCBCHHHHTT
T ss_pred ccHHHHHHHHHHHHhhHHHHHHHhhHhhhccccccccCHH-HHH----HHHhhhhhccHHHHHHHHHHhhccCCcccccC
Confidence 000000111000000 00000000000000 0000000 000 00000000000000000111222334456789
Q ss_pred CccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHH
Q 008093 355 VSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 355 I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
|++|+|+|+|++|+++|.+..........++.++.+++++||+.+.|. +..+.+.+.+||+
T Consensus 210 i~~P~Lvi~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~----p~~~~~~i~~Fl~ 270 (271)
T 3ia2_A 210 IDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAVTH----AQQLNEDLLAFLK 270 (271)
T ss_dssp CCSCEEEEEETTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTHHHHT----HHHHHHHHHHHHT
T ss_pred CCCCEEEEEeCCCCcCChHHHHHHHHHhCCCceEEEEcCCCCcccccC----HHHHHHHHHHHhh
Confidence 999999999999999998865444556678999999999999998883 3468999999986
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=4e-24 Score=213.16 Aligned_cols=271 Identities=14% Similarity=0.125 Sum_probs=173.2
Q ss_pred CCCCeeEE-EEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEE
Q 008093 116 PCFSYRRQ-LFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVV 194 (578)
Q Consensus 116 ~~~~y~r~-~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv 194 (578)
+.++|++. .+...||.++.+.++.+.+ ..+|+||++||+++ +...| ..++..|.++||+|++
T Consensus 12 ~~~~~~~~~~~~~~~g~~l~~~~~~~~~---------------~~~~~vv~~hG~~~-~~~~~-~~~~~~l~~~g~~v~~ 74 (303)
T 3pe6_A 12 QSIPYQDLPHLVNADGQYLFCRYWAPTG---------------TPKALIFVSHGAGE-HSGRY-EELARMLMGLDLLVFA 74 (303)
T ss_dssp TSCBGGGSCEEECTTSCEEEEEEECCSS---------------CCSEEEEEECCTTC-CGGGG-HHHHHHHHHTTEEEEE
T ss_pred CCcccCCCCeEecCCCeEEEEEEeccCC---------------CCCeEEEEECCCCc-hhhHH-HHHHHHHHhCCCcEEE
Confidence 34666665 7889999999988876532 45789999999955 44445 7889999999999999
Q ss_pred EeCCCCCCCCCCCCCCCC-CCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchh
Q 008093 195 SNHRGLGGVSITSDCFYN-AGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL 273 (578)
Q Consensus 195 ~D~RG~G~S~~~~~~~~~-~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~ 273 (578)
+|+||||.|.......+. ..+.+|+.++++++..+++..+++++||||||.+++.++..+++ +++++|+++++....
T Consensus 75 ~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--~v~~lvl~~~~~~~~ 152 (303)
T 3pe6_A 75 HDHVGHGQSEGERMVVSDFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPG--HFAGMVLISPLVLAN 152 (303)
T ss_dssp ECCTTSTTSCSSTTCCSSTHHHHHHHHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTT--TCSEEEEESCSSSBC
T ss_pred eCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhhccCCceEEEEEeCHHHHHHHHHHHhCcc--cccEEEEECccccCc
Confidence 999999999755333222 34568999999999999888899999999999999999999998 899999999887654
Q ss_pred hhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccc-cCCHHHHhccCCHHHHHhhhhhccC---CCC--CHHHHHHh-C
Q 008093 274 IGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSR-LANWEGIKKSRSIRDFDSHATCLVG---KFE--TVDTYYRN-C 346 (578)
Q Consensus 274 ~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~-~~d~~~i~~~~s~~efd~~~~~~~~---g~~--~~~~yy~~-~ 346 (578)
....... ...... .+ ....+.... ....... ......+......... ... .....+.. .
T Consensus 153 ~~~~~~~----~~~~~~----~~----~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (303)
T 3pe6_A 153 PESATTF----KVLAAK----VL----NSVLPNLSSGPIDSSVL--SRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVS 218 (303)
T ss_dssp HHHHHHH----HHHHHH----HH----HTTCCSCCCCCCCGGGT--CSCHHHHHHHHTCTTSCCSCCCHHHHHHHHHHHH
T ss_pred hhccHHH----HHHHHH----HH----HHhcccccCCccchhhh--hcchhHHHHhccCccccccchhhhhHHHHHHHHH
Confidence 3221111 111111 11 111111000 0000000 1111111111111110 000 00001100 1
Q ss_pred CcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCC--CEEEEEeCCCCccccccccccCc-ccHHHHHHHHHHhhc
Q 008093 347 SSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANK--NVVLATTWHGGHLAFFEGLTAAG-MWWVRAVNEYLGVLH 422 (578)
Q Consensus 347 s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~--~~~l~~~~~GGH~~~~eg~~~~~-~w~~~~v~eFL~~~~ 422 (578)
.....+.++++|+|+++|++|++++.+..... ....+ ++++.+++++||+.+.+. ++. ..+.+.+.+||++..
T Consensus 219 ~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gH~~~~~~--p~~~~~~~~~~~~~l~~~~ 294 (303)
T 3pe6_A 219 RVERALPKLTVPFLLLQGSADRLCDSKGAYLL-MELAKSQDKTLKIYEGAYHVLHKEL--PEVTNSVFHEINMWVSQRT 294 (303)
T ss_dssp HHHHHGGGCCSCEEEEEETTCSSBCHHHHHHH-HHHCCCSSEEEEEETTCCSCGGGSC--HHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHhhcCCCCEEEEeeCCCCCCChHHHHHH-HHhcccCCceEEEeCCCccceeccc--hHHHHHHHHHHHHHHhccC
Confidence 11245778999999999999999998754432 23333 899999999999999883 221 234556777777654
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A | Back alignment and structure |
|---|
Probab=99.92 E-value=7e-25 Score=219.23 Aligned_cols=263 Identities=15% Similarity=0.111 Sum_probs=153.5
Q ss_pred EEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCC
Q 008093 124 LFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGV 203 (578)
Q Consensus 124 ~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S 203 (578)
.++..||..+.+.-..+ +..|+||++||+++ +...| ..++..|.++||+|+++|+||||.|
T Consensus 3 ~~~~~~g~~l~y~~~g~-----------------~~~~~vvllHG~~~-~~~~w-~~~~~~L~~~g~~vi~~D~~G~G~S 63 (276)
T 1zoi_A 3 YVTTKDGVQIFYKDWGP-----------------RDAPVIHFHHGWPL-SADDW-DAQLLFFLAHGYRVVAHDRRGHGRS 63 (276)
T ss_dssp EEECTTSCEEEEEEESC-----------------TTSCEEEEECCTTC-CGGGG-HHHHHHHHHTTCEEEEECCTTSTTS
T ss_pred eEECCCCcEEEEEecCC-----------------CCCCeEEEECCCCc-chhHH-HHHHHHHHhCCCEEEEecCCCCCCC
Confidence 36678998887643321 23467999999965 44455 7788999999999999999999999
Q ss_pred CCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhc-CCCCCccEEEEEcCCcchh--hh--hHH
Q 008093 204 SITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEE-GEKTPVAGAAAICSPWDLL--IG--DRF 278 (578)
Q Consensus 204 ~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~-p~~~~V~~~Vlis~p~d~~--~~--~~~ 278 (578)
+..........+.+|+.++++++. ..+++++||||||.+++.+++.+ |+ +|+++|++++..... .. ...
T Consensus 64 ~~~~~~~~~~~~~~d~~~~l~~l~----~~~~~lvGhS~Gg~ia~~~a~~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~ 137 (276)
T 1zoi_A 64 SQVWDGHDMDHYADDVAAVVAHLG----IQGAVHVGHSTGGGEVVRYMARHPED--KVAKAVLIAAVPPLMVQTPGNPGG 137 (276)
T ss_dssp CCCSSCCSHHHHHHHHHHHHHHHT----CTTCEEEEETHHHHHHHHHHHHCTTS--CCCCEEEESCCCSCCBCCSSCTTS
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhC----CCceEEEEECccHHHHHHHHHHhCHH--heeeeEEecCCCcccccccccccc
Confidence 754222212345678888877764 35799999999999999999887 77 899999998632110 00 000
Q ss_pred HhhHHHHHHHHHHHHHhHHHHHhhhcc-cccccCCHHHHhccCCHHHHHhhhhh-ccCCCCCHHH---HHHhCCcccccC
Q 008093 279 IGRRLIQKIYDRALTIGLQDYAQLHEP-RYSRLANWEGIKKSRSIRDFDSHATC-LVGKFETVDT---YYRNCSSSTYVG 353 (578)
Q Consensus 279 l~~~~~~~~~~~~l~~~l~~~~~~~~~-~l~~~~d~~~i~~~~s~~efd~~~~~-~~~g~~~~~~---yy~~~s~~~~l~ 353 (578)
........+... +............. .+...... ............... .........+ .+...+....+.
T Consensus 138 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 213 (276)
T 1zoi_A 138 LPKSVFDGFQAQ-VASNRAQFYRDVPAGPFYGYNRP---GVEASEGIIGNWWRQGMIGSAKAHYDGIVAFSQTDFTEDLK 213 (276)
T ss_dssp BCHHHHHHHHHH-HHHCHHHHHHHHHHTTTTTTTST---TCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHHHH
T ss_pred ccHHHHHHHHHH-HHHhHHHHHHHhhhccccccccc---cccccHHHHHHHHhhhhhhhHHHHHHHHHHhcccchhhhcc
Confidence 000000011000 00000000000000 00000000 000000000000000 0000000000 111223334567
Q ss_pred CCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHH
Q 008093 354 NVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 354 ~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
+|++|+|+|+|++|+++|.+..........++.++.+++++||+.+.|. | ..+.+.|.+||+
T Consensus 214 ~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~--p--~~~~~~i~~fl~ 275 (276)
T 1zoi_A 214 GIQQPVLVMHGDDDQIVPYENSGVLSAKLLPNGALKTYKGYPHGMPTTH--A--DVINADLLAFIR 275 (276)
T ss_dssp HCCSCEEEEEETTCSSSCSTTTHHHHHHHSTTEEEEEETTCCTTHHHHT--H--HHHHHHHHHHHT
T ss_pred ccCCCEEEEEcCCCcccChHHHHHHHHhhCCCceEEEcCCCCCchhhhC--H--HHHHHHHHHHhc
Confidence 8999999999999999998744433455678999999999999998873 3 358899999985
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.92 E-value=2e-24 Score=215.12 Aligned_cols=262 Identities=13% Similarity=0.126 Sum_probs=151.4
Q ss_pred EEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCC
Q 008093 124 LFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGV 203 (578)
Q Consensus 124 ~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S 203 (578)
+++..||..+.+.-. ...|+|||+||+++ +...| ..++..|.++||+|+++|+||||.|
T Consensus 2 ~~~~~~g~~l~y~~~-------------------g~g~~vvllHG~~~-~~~~w-~~~~~~l~~~g~~vi~~D~~G~G~S 60 (274)
T 1a8q_A 2 ICTTRDGVEIFYKDW-------------------GQGRPVVFIHGWPL-NGDAW-QDQLKAVVDAGYRGIAHDRRGHGHS 60 (274)
T ss_dssp EEECTTSCEEEEEEE-------------------CSSSEEEEECCTTC-CGGGG-HHHHHHHHHTTCEEEEECCTTSTTS
T ss_pred eEEccCCCEEEEEec-------------------CCCceEEEECCCcc-hHHHH-HHHHHHHHhCCCeEEEEcCCCCCCC
Confidence 467789988876422 12367999999965 44455 6788899999999999999999999
Q ss_pred CCCCCCCCC-CCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhc-CCCCCccEEEEEcCCcch--hhh--hH
Q 008093 204 SITSDCFYN-AGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEE-GEKTPVAGAAAICSPWDL--LIG--DR 277 (578)
Q Consensus 204 ~~~~~~~~~-~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~-p~~~~V~~~Vlis~p~d~--~~~--~~ 277 (578)
+.... .+. ..+.+|+.++++++ +..+++++||||||.+++.+++.+ |+ +|+++|++++.... ... ..
T Consensus 61 ~~~~~-~~~~~~~~~dl~~~l~~l----~~~~~~lvGhS~Gg~ia~~~a~~~~p~--~v~~lvl~~~~~~~~~~~~~~~~ 133 (274)
T 1a8q_A 61 TPVWD-GYDFDTFADDLNDLLTDL----DLRDVTLVAHSMGGGELARYVGRHGTG--RLRSAVLLSAIPPVMIKSDKNPD 133 (274)
T ss_dssp CCCSS-CCSHHHHHHHHHHHHHHT----TCCSEEEEEETTHHHHHHHHHHHHCST--TEEEEEEESCCCSCCBCCSSCTT
T ss_pred CCCCC-CCcHHHHHHHHHHHHHHc----CCCceEEEEeCccHHHHHHHHHHhhhH--heeeeeEecCCCccccccccCcc
Confidence 75422 222 23456777776655 345899999999999999999887 77 89999999863211 000 00
Q ss_pred HHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhc-cCCCCCH---HHHHHhCCcccccC
Q 008093 278 FIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCL-VGKFETV---DTYYRNCSSSTYVG 353 (578)
Q Consensus 278 ~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~-~~g~~~~---~~yy~~~s~~~~l~ 353 (578)
.+.......+... +..............+...... .........+...... ....... ...+........+.
T Consensus 134 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 209 (274)
T 1a8q_A 134 GVPDEVFDALKNG-VLTERSQFWKDTAEGFFSANRP---GNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDLK 209 (274)
T ss_dssp SBCHHHHHHHHHH-HHHHHHHHHHHHHHHHTTTTST---TCCCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHCCCHHHHT
T ss_pred cchHHHHHHHHHH-hhccHHHHHHHhcccccccccc---cccccHHHHHHHHHHhhhcChHHHHHHHhhhhcCcHHHHhh
Confidence 0000000000000 0000000000000000000000 0000000000000000 0000000 01122233445678
Q ss_pred CCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHH
Q 008093 354 NVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 354 ~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
+|++|+|+|+|++|+++|.+..........++.++.+++++||+.++|.- .+..+.+.|.+||+
T Consensus 210 ~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~~--~p~~~~~~i~~fl~ 273 (274)
T 1a8q_A 210 KFDIPTLVVHGDDDQVVPIDATGRKSAQIIPNAELKVYEGSSHGIAMVPG--DKEKFNRDLLEFLN 273 (274)
T ss_dssp TCCSCEEEEEETTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTTTTSTT--HHHHHHHHHHHHHT
T ss_pred cCCCCEEEEecCcCCCCCcHHHHHHHHhhCCCceEEEECCCCCceecccC--CHHHHHHHHHHHhc
Confidence 99999999999999999987443334556789999999999999988711 13368899999985
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.92 E-value=2.5e-24 Score=214.41 Aligned_cols=261 Identities=15% Similarity=0.089 Sum_probs=151.5
Q ss_pred EEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCC
Q 008093 124 LFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGV 203 (578)
Q Consensus 124 ~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S 203 (578)
.++..||.++.+.-. ...|+||++||+++ +...| ..++..|.++||+|+++|+||||.|
T Consensus 2 ~~~~~~g~~l~y~~~-------------------g~~~~vvllHG~~~-~~~~~-~~~~~~L~~~g~~vi~~D~~G~G~S 60 (273)
T 1a8s_A 2 TFTTRDGTQIYYKDW-------------------GSGQPIVFSHGWPL-NADSW-ESQMIFLAAQGYRVIAHDRRGHGRS 60 (273)
T ss_dssp EEECTTSCEEEEEEE-------------------SCSSEEEEECCTTC-CGGGG-HHHHHHHHHTTCEEEEECCTTSTTS
T ss_pred eEecCCCcEEEEEEc-------------------CCCCEEEEECCCCC-cHHHH-hhHHhhHhhCCcEEEEECCCCCCCC
Confidence 367788988875422 12367999999965 44455 6788999999999999999999999
Q ss_pred CCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhc-CCCCCccEEEEEcCCcch--hhh--hHH
Q 008093 204 SITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEE-GEKTPVAGAAAICSPWDL--LIG--DRF 278 (578)
Q Consensus 204 ~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~-p~~~~V~~~Vlis~p~d~--~~~--~~~ 278 (578)
+..........+.+|+.++++++ +..+++++||||||.+++.+++.+ |+ +|+++|++++.... ... ...
T Consensus 61 ~~~~~~~~~~~~~~dl~~~l~~l----~~~~~~lvGhS~Gg~ia~~~a~~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~ 134 (273)
T 1a8s_A 61 SQPWSGNDMDTYADDLAQLIEHL----DLRDAVLFGFSTGGGEVARYIGRHGTA--RVAKAGLISAVPPLMLKTEANPGG 134 (273)
T ss_dssp CCCSSCCSHHHHHHHHHHHHHHT----TCCSEEEEEETHHHHHHHHHHHHHCST--TEEEEEEESCCCSCCBCCSSCTTS
T ss_pred CCCCCCCCHHHHHHHHHHHHHHh----CCCCeEEEEeChHHHHHHHHHHhcCch--heeEEEEEcccCcccccCcccccc
Confidence 75422211123456777776654 346899999999999999998887 77 89999999863211 000 000
Q ss_pred HhhHHHHHHHHHHHHHhHHHHHhhhcc-cccccCCHHHHhccCCHHHHHhhhhhc-cCCCCCH---HHHHHhCCcccccC
Q 008093 279 IGRRLIQKIYDRALTIGLQDYAQLHEP-RYSRLANWEGIKKSRSIRDFDSHATCL-VGKFETV---DTYYRNCSSSTYVG 353 (578)
Q Consensus 279 l~~~~~~~~~~~~l~~~l~~~~~~~~~-~l~~~~d~~~i~~~~s~~efd~~~~~~-~~g~~~~---~~yy~~~s~~~~l~ 353 (578)
........+... +............. .+...... ................ ....... ...+........+.
T Consensus 135 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 210 (273)
T 1a8s_A 135 LPMEVFDGIRQA-SLADRSQLYKDLASGPFFGFNQP---GAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSETDFTEDLK 210 (273)
T ss_dssp BCHHHHHHHHHH-HHHHHHHHHHHHHHTTSSSTTST---TCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHH
T ss_pred CcHHHHHHHHHH-hHhhHHHHHHHhhcccccCcCCc---ccccCHHHHHHHHHhccccchhHHHHHHHHHhccChhhhhh
Confidence 000000000000 00000000000000 00000000 0000000000000000 0000000 01122233345678
Q ss_pred CCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHH
Q 008093 354 NVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 354 ~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
+|++|+|+|+|++|+++|.+..........++.++.+++++||+.+.|. +..+.+.|.+||+
T Consensus 211 ~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~----p~~~~~~i~~fl~ 272 (273)
T 1a8s_A 211 KIDVPTLVVHGDADQVVPIEASGIASAALVKGSTLKIYSGAPHGLTDTH----KDQLNADLLAFIK 272 (273)
T ss_dssp TCCSCEEEEEETTCSSSCSTTTHHHHHHHSTTCEEEEETTCCSCHHHHT----HHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCccCChHHHHHHHHHhCCCcEEEEeCCCCCcchhhC----HHHHHHHHHHHHh
Confidence 8999999999999999998744433455678899999999999998873 3368999999986
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.92 E-value=3e-24 Score=213.99 Aligned_cols=263 Identities=13% Similarity=0.090 Sum_probs=152.6
Q ss_pred EEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCC
Q 008093 124 LFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGV 203 (578)
Q Consensus 124 ~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S 203 (578)
.++..||..+.+.-..+ .+.|+|||+||+++ +...| ..++..|.++||+|+++|+||||.|
T Consensus 2 ~~~~~~g~~l~y~~~g~-----------------~~~~~vvllHG~~~-~~~~w-~~~~~~l~~~g~~vi~~D~~G~G~S 62 (275)
T 1a88_A 2 TVTTSDGTNIFYKDWGP-----------------RDGLPVVFHHGWPL-SADDW-DNQMLFFLSHGYRVIAHDRRGHGRS 62 (275)
T ss_dssp EEECTTSCEEEEEEESC-----------------TTSCEEEEECCTTC-CGGGG-HHHHHHHHHTTCEEEEECCTTSTTS
T ss_pred eEEccCCCEEEEEEcCC-----------------CCCceEEEECCCCC-chhhH-HHHHHHHHHCCceEEEEcCCcCCCC
Confidence 36778998887643321 23467999999965 44455 6788999999999999999999999
Q ss_pred CCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhc-CCCCCccEEEEEcCCcchh--hh--hHH
Q 008093 204 SITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEE-GEKTPVAGAAAICSPWDLL--IG--DRF 278 (578)
Q Consensus 204 ~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~-p~~~~V~~~Vlis~p~d~~--~~--~~~ 278 (578)
+..........+.+|+.++++++. ..+++++||||||.+++.+++.+ |+ +|+++|++++..... .. ...
T Consensus 63 ~~~~~~~~~~~~~~dl~~~l~~l~----~~~~~lvGhS~Gg~ia~~~a~~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~ 136 (275)
T 1a88_A 63 DQPSTGHDMDTYAADVAALTEALD----LRGAVHIGHSTGGGEVARYVARAEPG--RVAKAVLVSAVPPVMVKSDTNPDG 136 (275)
T ss_dssp CCCSSCCSHHHHHHHHHHHHHHHT----CCSEEEEEETHHHHHHHHHHHHSCTT--SEEEEEEESCCCSCCBCBTTBTTS
T ss_pred CCCCCCCCHHHHHHHHHHHHHHcC----CCceEEEEeccchHHHHHHHHHhCch--heEEEEEecCCCcccccCccCccc
Confidence 754222111344577777777663 45899999999999999998887 77 899999998632110 00 000
Q ss_pred HhhHHHHHHHHHHHHHhHHHHHhhhcc-cccccCCHHHHhccCCHHHHHhhhhh-ccCCCCCHH---HHHHhCCcccccC
Q 008093 279 IGRRLIQKIYDRALTIGLQDYAQLHEP-RYSRLANWEGIKKSRSIRDFDSHATC-LVGKFETVD---TYYRNCSSSTYVG 353 (578)
Q Consensus 279 l~~~~~~~~~~~~l~~~l~~~~~~~~~-~l~~~~d~~~i~~~~s~~efd~~~~~-~~~g~~~~~---~yy~~~s~~~~l~ 353 (578)
........+... +............. .+...... .........+..... ......... ..+........+.
T Consensus 137 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 212 (275)
T 1a88_A 137 LPLEVFDEFRAA-LAANRAQFYIDVPSGPFYGFNRE---GATVSQGLIDHWWLQGMMGAANAHYECIAAFSETDFTDDLK 212 (275)
T ss_dssp BCHHHHHHHHHH-HHHCHHHHHHHHHHTTTTTTTST---TCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHH
T ss_pred CCHHHHHHHHHH-HhhhHHHHHHhhhccccccccCc---ccccCHHHHHHHHHHhhhcchHhHHHHHhhhhhcccccccc
Confidence 000000111000 00000000000000 00000000 000000000000000 000000000 0112223334567
Q ss_pred CCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHH
Q 008093 354 NVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 354 ~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
+|++|+|+|+|++|+++|.+..........++.++.+++++||+.+.|. | ..+.+.|.+||+
T Consensus 213 ~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~--p--~~~~~~i~~fl~ 274 (275)
T 1a88_A 213 RIDVPVLVAHGTDDQVVPYADAAPKSAELLANATLKSYEGLPHGMLSTH--P--EVLNPDLLAFVK 274 (275)
T ss_dssp HCCSCEEEEEETTCSSSCSTTTHHHHHHHSTTEEEEEETTCCTTHHHHC--H--HHHHHHHHHHHH
T ss_pred cCCCCEEEEecCCCccCCcHHHHHHHHhhCCCcEEEEcCCCCccHHHhC--H--HHHHHHHHHHhh
Confidence 8999999999999999998744333455678999999999999998873 3 358899999986
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=7.6e-25 Score=220.02 Aligned_cols=242 Identities=16% Similarity=0.119 Sum_probs=142.6
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEE
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIG 239 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG 239 (578)
.|+|||+||+++++ ..| +.++..|.++||+|+++|+||||.|+..........+.+|+.++++++ +..+++++|
T Consensus 27 g~~vvllHG~~~~~-~~w-~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~~l----~~~~~~lvG 100 (281)
T 3fob_A 27 GKPVVLIHGWPLSG-RSW-EYQVPALVEAGYRVITYDRRGFGKSSQPWEGYEYDTFTSDLHQLLEQL----ELQNVTLVG 100 (281)
T ss_dssp SEEEEEECCTTCCG-GGG-TTTHHHHHHTTEEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHT----TCCSEEEEE
T ss_pred CCeEEEECCCCCcH-HHH-HHHHHHHHhCCCEEEEeCCCCCCCCCCCccccCHHHHHHHHHHHHHHc----CCCcEEEEE
Confidence 46689999996644 445 567888888999999999999999976533222234456776666655 456899999
Q ss_pred EchHHHHHHHHHhhc-CCCCCccEEEEEcCCcchh-------hh--hHHHhhHHHHHHHHHHHHHhHHHHHhhhccc--c
Q 008093 240 TSIGANILVKYLGEE-GEKTPVAGAAAICSPWDLL-------IG--DRFIGRRLIQKIYDRALTIGLQDYAQLHEPR--Y 307 (578)
Q Consensus 240 hSmGG~ial~ya~~~-p~~~~V~~~Vlis~p~d~~-------~~--~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~--l 307 (578)
|||||.+++.+++.+ |+ +++++|++++..... .. .......+........ ...+.......... .
T Consensus 101 hS~GG~i~~~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 177 (281)
T 3fob_A 101 FSMGGGEVARYISTYGTD--RIEKVVFAGAVPPYLYKSEDHPEGALDDATIETFKSGVINDR-LAFLDEFTKGFFAAGDR 177 (281)
T ss_dssp ETTHHHHHHHHHHHHCST--TEEEEEEESCCCSCCBCCSSSTTCSBCHHHHHHHHHHHHHHH-HHHHHHHHHHHTCBTTB
T ss_pred ECccHHHHHHHHHHcccc--ceeEEEEecCCCcchhccccccccccchhHHHHHHHHhhhhH-HHHHHHHHHHhcccccc
Confidence 999999999988876 56 899999998532110 00 0000001101110000 00011111100000 0
Q ss_pred cccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEE
Q 008093 308 SRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVV 387 (578)
Q Consensus 308 ~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~ 387 (578)
......... ...++........++......+...+....+.+|++|+|+|+|++|+++|.+..........++.+
T Consensus 178 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~p~~~ 252 (281)
T 3fob_A 178 TDLVSESFR-----LYNWDIAAGASPKGTLDCITAFSKTDFRKDLEKFNIPTLIIHGDSDATVPFEYSGKLTHEAIPNSK 252 (281)
T ss_dssp CCSSCHHHH-----HHHHHHHHTSCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCGGGTHHHHHHHSTTCE
T ss_pred cccchHHHH-----HHhhhhhcccChHHHHHHHHHccccchhhhhhhcCCCEEEEecCCCCCcCHHHHHHHHHHhCCCce
Confidence 000000000 000000000000000001111223344567899999999999999999998855344556789999
Q ss_pred EEEeCCCCccccccccccCcccHHHHHHHHHH
Q 008093 388 LATTWHGGHLAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 388 l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
+.+++++||+.+.|. | ..+.+.|.+||+
T Consensus 253 ~~~i~~~gH~~~~e~--p--~~~~~~i~~Fl~ 280 (281)
T 3fob_A 253 VALIKGGPHGLNATH--A--KEFNEALLLFLK 280 (281)
T ss_dssp EEEETTCCTTHHHHT--H--HHHHHHHHHHHC
T ss_pred EEEeCCCCCchhhhh--H--HHHHHHHHHHhh
Confidence 999999999999883 3 369999999985
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-23 Score=216.25 Aligned_cols=273 Identities=14% Similarity=0.114 Sum_probs=175.3
Q ss_pred CCCCeeEE-EEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEE
Q 008093 116 PCFSYRRQ-LFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVV 194 (578)
Q Consensus 116 ~~~~y~r~-~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv 194 (578)
..++|++. .+...||.++.+.++.+.+ ..+|+||++||+++ +...| ..++..|.++||+|++
T Consensus 30 ~~~~~~~~~~~~~~dg~~l~~~~~~p~~---------------~~~p~vv~~HG~~~-~~~~~-~~~~~~l~~~g~~vi~ 92 (342)
T 3hju_A 30 QSIPYQDLPHLVNADGQYLFCRYWKPTG---------------TPKALIFVSHGAGE-HSGRY-EELARMLMGLDLLVFA 92 (342)
T ss_dssp TSCBTTSSCEEECTTSCEEEEEEECCSS---------------CCSEEEEEECCTTC-CGGGG-HHHHHHHHTTTEEEEE
T ss_pred CCcccccCceEEccCCeEEEEEEeCCCC---------------CCCcEEEEECCCCc-ccchH-HHHHHHHHhCCCeEEE
Confidence 35667776 8899999999998886532 46789999999965 44445 7899999999999999
Q ss_pred EeCCCCCCCCCCCCCCCC-CCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchh
Q 008093 195 SNHRGLGGVSITSDCFYN-AGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL 273 (578)
Q Consensus 195 ~D~RG~G~S~~~~~~~~~-~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~ 273 (578)
+|+||+|.|.......+. ..+.+|+.++++++..+++..+++++||||||.+++.++..+++ +|+++|+++++.+..
T Consensus 93 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~--~v~~lvl~~~~~~~~ 170 (342)
T 3hju_A 93 HDHVGHGQSEGERMVVSDFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPG--HFAGMVLISPLVLAN 170 (342)
T ss_dssp ECCTTSTTSCSSTTCCSCTHHHHHHHHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTT--TCSEEEEESCCCSCC
T ss_pred EcCCCCcCCCCcCCCcCcHHHHHHHHHHHHHHHHHhCCCCcEEEEEeChHHHHHHHHHHhCcc--ccceEEEECcccccc
Confidence 999999999865433333 34568999999999999888899999999999999999999998 899999999877654
Q ss_pred hhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccC---CCC--CHHHHHH-hCC
Q 008093 274 IGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVG---KFE--TVDTYYR-NCS 347 (578)
Q Consensus 274 ~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~---g~~--~~~~yy~-~~s 347 (578)
.............+.. ....... . .......+ ......+......+.. ... .....+. ...
T Consensus 171 ~~~~~~~~~~~~~~~~--------~~~~~~~--~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (342)
T 3hju_A 171 PESATTFKVLAAKVLN--------LVLPNLS--L-GPIDSSVL--SRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSR 237 (342)
T ss_dssp TTTTSHHHHHHHHHHH--------HHCTTCB--C-CCCCGGGS--CSCHHHHHHHHTCTTCCCSCCBHHHHHHHHHHHHH
T ss_pred hhhhhHHHHHHHHHHH--------Hhccccc--c-Cccccccc--ccchHHHHHHhcCcccccccccHHHHHHHHHHHHH
Confidence 3221111111111111 1100000 0 00000000 1111111111110100 000 0000110 011
Q ss_pred cccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCC--CEEEEEeCCCCccccccccccCc-ccHHHHHHHHHHhhcC
Q 008093 348 SSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANK--NVVLATTWHGGHLAFFEGLTAAG-MWWVRAVNEYLGVLHS 423 (578)
Q Consensus 348 ~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~--~~~l~~~~~GGH~~~~eg~~~~~-~w~~~~v~eFL~~~~~ 423 (578)
....+.+|++|+|+|+|++|++++.+..... ....+ ++++++++++||+.+.+. ++. ..+.+.+.+||++...
T Consensus 238 ~~~~~~~i~~Pvlii~G~~D~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gH~~~~~~--~~~~~~~~~~~~~~l~~~~~ 313 (342)
T 3hju_A 238 VERALPKLTVPFLLLQGSADRLCDSKGAYLL-MELAKSQDKTLKIYEGAYHVLHKEL--PEVTNSVFHEINMWVSQRTA 313 (342)
T ss_dssp HHHHGGGCCSCEEEEEETTCSSSCHHHHHHH-HHHCCCSSEEEEEETTCCSCGGGSC--HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCcCEEEEEeCCCcccChHHHHHH-HHHcCCCCceEEEECCCCchhhcCC--hHHHHHHHHHHHHHHhcccC
Confidence 2246788999999999999999998754432 23333 899999999999999883 221 1345667888877553
|
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=3.1e-24 Score=214.82 Aligned_cols=256 Identities=14% Similarity=0.106 Sum_probs=155.6
Q ss_pred EEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCC
Q 008093 123 QLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGG 202 (578)
Q Consensus 123 ~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~ 202 (578)
..+...||.++.+....+ .++|+||++||+++ +...| ..++..|.+ +|+|+++|+||||.
T Consensus 7 ~~~~~~~g~~l~y~~~G~-----------------~~~p~lvl~hG~~~-~~~~w-~~~~~~L~~-~~~vi~~D~rG~G~ 66 (266)
T 3om8_A 7 SFLATSDGASLAYRLDGA-----------------AEKPLLALSNSIGT-TLHMW-DAQLPALTR-HFRVLRYDARGHGA 66 (266)
T ss_dssp EEEECTTSCEEEEEEESC-----------------TTSCEEEEECCTTC-CGGGG-GGGHHHHHT-TCEEEEECCTTSTT
T ss_pred eEEeccCCcEEEEEecCC-----------------CCCCEEEEeCCCcc-CHHHH-HHHHHHhhc-CcEEEEEcCCCCCC
Confidence 456788999998765422 34688999999954 55556 677888875 79999999999999
Q ss_pred CCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhH
Q 008093 203 VSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRR 282 (578)
Q Consensus 203 S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~ 282 (578)
|+..........+.+|+.++++.+ +..+++++||||||.+++.+|.++|+ +|+++|+++++........+..+
T Consensus 67 S~~~~~~~~~~~~a~dl~~~l~~l----~~~~~~lvGhS~Gg~va~~~A~~~P~--rv~~lvl~~~~~~~~~~~~~~~~- 139 (266)
T 3om8_A 67 SSVPPGPYTLARLGEDVLELLDAL----EVRRAHFLGLSLGGIVGQWLALHAPQ--RIERLVLANTSAWLGPAAQWDER- 139 (266)
T ss_dssp SCCCCSCCCHHHHHHHHHHHHHHT----TCSCEEEEEETHHHHHHHHHHHHCGG--GEEEEEEESCCSBCCCSHHHHHH-
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHh----CCCceEEEEEChHHHHHHHHHHhChH--hhheeeEecCcccCCchhHHHHH-
Confidence 976533222234456777766655 34589999999999999999999999 89999999875432221111100
Q ss_pred HHHHHHH-HHHHHhHHHHHhhhcccccccCCHHHHhccCC-HHHHHhhhhh-ccCCCCCHHHHHHhCCcccccCCCccce
Q 008093 283 LIQKIYD-RALTIGLQDYAQLHEPRYSRLANWEGIKKSRS-IRDFDSHATC-LVGKFETVDTYYRNCSSSTYVGNVSIPL 359 (578)
Q Consensus 283 ~~~~~~~-~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s-~~efd~~~~~-~~~g~~~~~~yy~~~s~~~~l~~I~vPv 359 (578)
. ..... ..+........... ........... ...+...... ...++...............+.+|++|+
T Consensus 140 ~-~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~ 211 (266)
T 3om8_A 140 I-AAVLQAEDMSETAAGFLGNW-------FPPALLERAEPVVERFRAMLMATNRHGLAGSFAAVRDTDLRAQLARIERPT 211 (266)
T ss_dssp H-HHHHHCSSSHHHHHHHHHHH-------SCHHHHHSCCHHHHHHHHHHHTSCHHHHHHHHHHHHTCBCTTTGGGCCSCE
T ss_pred H-HHHHccccHHHHHHHHHHHh-------cChhhhhcChHHHHHHHHHHHhCCHHHHHHHHHHhhccchhhHhcCCCCCE
Confidence 0 00000 00000000000000 00000000000 0011111000 0000000111122233445688999999
Q ss_pred EEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHH
Q 008093 360 LCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 360 LiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
|+|+|++|+++|.+.... ..+..++.++++++ +||+.++|. | ..+++.|.+||+
T Consensus 212 Lvi~G~~D~~~~~~~~~~-l~~~ip~a~~~~i~-~gH~~~~e~--p--~~~~~~i~~Fl~ 265 (266)
T 3om8_A 212 LVIAGAYDTVTAASHGEL-IAASIAGARLVTLP-AVHLSNVEF--P--QAFEGAVLSFLG 265 (266)
T ss_dssp EEEEETTCSSSCHHHHHH-HHHHSTTCEEEEES-CCSCHHHHC--H--HHHHHHHHHHHT
T ss_pred EEEEeCCCCCCCHHHHHH-HHHhCCCCEEEEeC-CCCCccccC--H--HHHHHHHHHHhc
Confidence 999999999999765443 56678899999997 899999993 3 358999999985
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-23 Score=209.65 Aligned_cols=241 Identities=14% Similarity=0.130 Sum_probs=144.4
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCC-CCchHHHHHHHHHHHHHCCCCcEE
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN-AGWTEDAREVIGYLHHEYPKAPLF 236 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~-~~~~~Dl~~~i~~l~~~~~~~~i~ 236 (578)
.++|+|||+||+++ +...| +.++..|.+ +|+|+++|+||||.|+......++ ..+.+|+.++++ ..+..+++
T Consensus 13 ~~~~~vvllHG~~~-~~~~w-~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~----~l~~~~~~ 85 (268)
T 3v48_A 13 ADAPVVVLISGLGG-SGSYW-LPQLAVLEQ-EYQVVCYDQRGTGNNPDTLAEDYSIAQMAAELHQALV----AAGIEHYA 85 (268)
T ss_dssp TTCCEEEEECCTTC-CGGGG-HHHHHHHHT-TSEEEECCCTTBTTBCCCCCTTCCHHHHHHHHHHHHH----HTTCCSEE
T ss_pred CCCCEEEEeCCCCc-cHHHH-HHHHHHHhh-cCeEEEECCCCCCCCCCCccccCCHHHHHHHHHHHHH----HcCCCCeE
Confidence 45788999999965 44455 677778765 799999999999999755333232 233345555444 44556899
Q ss_pred EEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHH
Q 008093 237 AIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGI 316 (578)
Q Consensus 237 lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i 316 (578)
++||||||.+++.++.++|+ +|.++|++++............... ...... .....+.... ..+ ......+
T Consensus 86 lvGhS~GG~ia~~~A~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~-~~~--~~~~~~~ 156 (268)
T 3v48_A 86 VVGHALGALVGMQLALDYPA--SVTVLISVNGWLRINAHTRRCFQVR-ERLLYS---GGAQAWVEAQ-PLF--LYPADWM 156 (268)
T ss_dssp EEEETHHHHHHHHHHHHCTT--TEEEEEEESCCSBCCHHHHHHHHHH-HHHHHH---HHHHHHHHHH-HHH--HSCHHHH
T ss_pred EEEecHHHHHHHHHHHhChh--hceEEEEeccccccchhhhHHHHHH-HHHHhc---cchhhhhhhh-hhh--cCchhhh
Confidence 99999999999999999999 8999999987543322111100000 000000 0000000000 000 0000000
Q ss_pred hccCCHHHHHhhhhhccCCCCCHHH------HHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEE
Q 008093 317 KKSRSIRDFDSHATCLVGKFETVDT------YYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLAT 390 (578)
Q Consensus 317 ~~~~s~~efd~~~~~~~~g~~~~~~------yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~ 390 (578)
. ................+..... .....+....+.+|++|+|+|+|++|+++|.+.... ..+..++.++.+
T Consensus 157 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~-l~~~~p~~~~~~ 233 (268)
T 3v48_A 157 A--ARAPRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSSE-LHAALPDSQKMV 233 (268)
T ss_dssp H--TTHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCBCTTTGGGCCSCEEEEEETTCSSSCTHHHHH-HHHHCSSEEEEE
T ss_pred h--cccccchhhHHHHHhhcCchhHHHHHHHHHhccchhhhhhcCCCCeEEEEeCCCcccCHHHHHH-HHHhCCcCeEEE
Confidence 0 0000000000000001111111 112233345678999999999999999999875443 456788999999
Q ss_pred eCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 391 TWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 391 ~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
++++||+.++|. +..+.+.|.+||...
T Consensus 234 ~~~~GH~~~~e~----p~~~~~~i~~fl~~~ 260 (268)
T 3v48_A 234 MPYGGHACNVTD----PETFNALLLNGLASL 260 (268)
T ss_dssp ESSCCTTHHHHC----HHHHHHHHHHHHHHH
T ss_pred eCCCCcchhhcC----HHHHHHHHHHHHHHh
Confidence 999999999983 346999999999875
|
| >4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A | Back alignment and structure |
|---|
Probab=99.92 E-value=4.5e-25 Score=223.02 Aligned_cols=229 Identities=19% Similarity=0.175 Sum_probs=147.9
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEE
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAI 238 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lv 238 (578)
+++.||++||++|++. .| +.+++.|+++||+|+++|+||||.|+..........+.+|+.++++++.... .+++++
T Consensus 50 ~~~~VlllHG~~~s~~-~~-~~la~~La~~Gy~Via~Dl~GhG~S~~~~~~~~~~~~~~d~~~~~~~l~~~~--~~v~lv 125 (281)
T 4fbl_A 50 SRIGVLVSHGFTGSPQ-SM-RFLAEGFARAGYTVATPRLTGHGTTPAEMAASTASDWTADIVAAMRWLEERC--DVLFMT 125 (281)
T ss_dssp SSEEEEEECCTTCCGG-GG-HHHHHHHHHTTCEEEECCCTTSSSCHHHHHTCCHHHHHHHHHHHHHHHHHHC--SEEEEE
T ss_pred CCceEEEECCCCCCHH-HH-HHHHHHHHHCCCEEEEECCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhCC--CeEEEE
Confidence 4456999999976544 45 7899999999999999999999998643222222456789999999998764 489999
Q ss_pred EEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhc
Q 008093 239 GTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKK 318 (578)
Q Consensus 239 GhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~ 318 (578)
||||||.+++.++.++|+ +|+++|+++++.......... +. +........+.+......+....
T Consensus 126 G~S~GG~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~------------~~--~~~~~~~~~~~~~~~~~~~~~~~ 189 (281)
T 4fbl_A 126 GLSMGGALTVWAAGQFPE--RFAGIMPINAALRMESPDLAA------------LA--FNPDAPAELPGIGSDIKAEGVKE 189 (281)
T ss_dssp EETHHHHHHHHHHHHSTT--TCSEEEEESCCSCCCCHHHHH------------HH--TCTTCCSEEECCCCCCSSTTCCC
T ss_pred EECcchHHHHHHHHhCch--hhhhhhcccchhcccchhhHH------------HH--HhHhhHHhhhcchhhhhhHHHHH
Confidence 999999999999999998 899999999887653211000 00 00000000000000000000000
Q ss_pred cCCHHHHHhhhhhccCCCCCHHHHHHhC-CcccccCCCccceEEEEeCCCCCCCCCCcchHHH-hcCCCEEEEEeCCCCc
Q 008093 319 SRSIRDFDSHATCLVGKFETVDTYYRNC-SSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDEC-RANKNVVLATTWHGGH 396 (578)
Q Consensus 319 ~~s~~efd~~~~~~~~g~~~~~~yy~~~-s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~-~~~~~~~l~~~~~GGH 396 (578)
... .........++.... .....+++|++|+|+|+|++|+++|.+....... ..++++++++++++||
T Consensus 190 ~~~----------~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~~~~l~~~~~~gH 259 (281)
T 4fbl_A 190 LAY----------PVTPVPAIKHLITIGAVAEMLLPRVKCPALIIQSREDHVVPPHNGELIYNGIGSTEKELLWLENSYH 259 (281)
T ss_dssp CCC----------SEEEGGGHHHHHHHHHHHHHHGGGCCSCEEEEEESSCSSSCTHHHHHHHHHCCCSSEEEEEESSCCS
T ss_pred hhh----------ccCchHHHHHHHHhhhhccccccccCCCEEEEEeCCCCCcCHHHHHHHHHhCCCCCcEEEEECCCCC
Confidence 000 000000111111100 1124578899999999999999999875544222 2356789999999999
Q ss_pred cccccccccCcccHHHHHHHHHHh
Q 008093 397 LAFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 397 ~~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
+.++| .++..+.+.|.+||++
T Consensus 260 ~~~~e---~~~e~v~~~i~~FL~~ 280 (281)
T 4fbl_A 260 VATLD---NDKELILERSLAFIRK 280 (281)
T ss_dssp CGGGS---TTHHHHHHHHHHHHHT
T ss_pred cCccc---cCHHHHHHHHHHHHHh
Confidence 98887 2344688999999985
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4.4e-24 Score=211.45 Aligned_cols=246 Identities=14% Similarity=0.051 Sum_probs=168.1
Q ss_pred eEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCC
Q 008093 121 RRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGL 200 (578)
Q Consensus 121 ~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~ 200 (578)
..+.....||..+.+.++.+.. +++|+||++||++++....++..++..+.++||+|+++|+||+
T Consensus 22 ~~~~~~~~~g~~l~~~~~~p~~---------------~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~ 86 (270)
T 3pfb_A 22 MATITLERDGLQLVGTREEPFG---------------EIYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGH 86 (270)
T ss_dssp EEEEEEEETTEEEEEEEEECSS---------------SSEEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECCTTS
T ss_pred ceEEEeccCCEEEEEEEEcCCC---------------CCCCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEccccc
Confidence 4444555689999888776532 4578999999997765455558899999999999999999999
Q ss_pred CCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHh
Q 008093 201 GGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIG 280 (578)
Q Consensus 201 G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~ 280 (578)
|.|...........+.+|+.+++++++++.+..+++++||||||.+++.++..+++ +++++|+++++.+.....
T Consensus 87 G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~--~v~~~v~~~~~~~~~~~~---- 160 (270)
T 3pfb_A 87 GDSDGKFENMTVLNEIEDANAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYPD--LIKKVVLLAPAATLKGDA---- 160 (270)
T ss_dssp TTSSSCGGGCCHHHHHHHHHHHHHHHHTCTTEEEEEEEEETHHHHHHHHHHHHCTT--TEEEEEEESCCTHHHHHH----
T ss_pred cCCCCCCCccCHHHHHHhHHHHHHHHHhCcCCCeEEEEEeCchhHHHHHHHHhCch--hhcEEEEeccccccchhh----
Confidence 99976533322245578999999999887776799999999999999999999988 899999999876542210
Q ss_pred hHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceE
Q 008093 281 RRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLL 360 (578)
Q Consensus 281 ~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvL 360 (578)
..... .. .. .....+... ..+... ..................+.++++|+|
T Consensus 161 -----------~~~~~----~~--~~----~~~~~~~~~---~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~P~l 211 (270)
T 3pfb_A 161 -----------LEGNT----QG--VT----YNPDHIPDR---LPFKDL-----TLGGFYLRIAQQLPIYEVSAQFTKPVC 211 (270)
T ss_dssp -----------HHTEE----TT--EE----CCTTSCCSE---EEETTE-----EEEHHHHHHHHHCCHHHHHTTCCSCEE
T ss_pred -----------hhhhh----hc--cc----cCccccccc---cccccc-----ccchhHhhcccccCHHHHHhhCCccEE
Confidence 00000 00 00 000000000 000000 000011122223344456788999999
Q ss_pred EEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 361 CISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 361 iI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
+++|++|+++|.+.... .....++.++.+++++||..+.+ ....+.+.|.+||++.
T Consensus 212 ~i~g~~D~~~~~~~~~~-~~~~~~~~~~~~~~~~gH~~~~~----~~~~~~~~i~~fl~~~ 267 (270)
T 3pfb_A 212 LIHGTDDTVVSPNASKK-YDQIYQNSTLHLIEGADHCFSDS----YQKNAVNLTTDFLQNN 267 (270)
T ss_dssp EEEETTCSSSCTHHHHH-HHHHCSSEEEEEETTCCTTCCTH----HHHHHHHHHHHHHC--
T ss_pred EEEcCCCCCCCHHHHHH-HHHhCCCCeEEEcCCCCcccCcc----chHHHHHHHHHHHhhc
Confidence 99999999999875544 44557889999999999998755 2336888999998763
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3.6e-24 Score=211.69 Aligned_cols=238 Identities=16% Similarity=0.092 Sum_probs=155.9
Q ss_pred cCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCC
Q 008093 128 SDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITS 207 (578)
Q Consensus 128 ~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~ 207 (578)
.||.++...++.+... ...+|+||++||++++.....+..++..|.++||+|+++|+||||.|+...
T Consensus 8 ~~g~~l~~~~~~p~~~-------------~~~~p~vvl~HG~~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~ 74 (251)
T 2wtm_A 8 CDGIKLNAYLDMPKNN-------------PEKCPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADMYGHGKSDGKF 74 (251)
T ss_dssp ETTEEEEEEEECCTTC-------------CSSEEEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTSSSCG
T ss_pred cCCcEEEEEEEccCCC-------------CCCCCEEEEEcCCCcccccccHHHHHHHHHHCCCEEEEecCCCCCCCCCcc
Confidence 4888887765554320 135688999999976532333478899999999999999999999987542
Q ss_pred CCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHH
Q 008093 208 DCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKI 287 (578)
Q Consensus 208 ~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~ 287 (578)
.......+.+|+.++++++.+..+..+++++||||||.+++.++.++|+ +|+++|+++++.......
T Consensus 75 ~~~~~~~~~~d~~~~~~~l~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~----------- 141 (251)
T 2wtm_A 75 EDHTLFKWLTNILAVVDYAKKLDFVTDIYMAGHSQGGLSVMLAAAMERD--IIKALIPLSPAAMIPEIA----------- 141 (251)
T ss_dssp GGCCHHHHHHHHHHHHHHHTTCTTEEEEEEEEETHHHHHHHHHHHHTTT--TEEEEEEESCCTTHHHHH-----------
T ss_pred ccCCHHHHHHHHHHHHHHHHcCcccceEEEEEECcchHHHHHHHHhCcc--cceEEEEECcHHHhHHHH-----------
Confidence 2221234568999999999765434589999999999999999999998 899999998765331100
Q ss_pred HHHHHHHhHHHHHhhh-cccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHh---CCcccccCCCccceEEEE
Q 008093 288 YDRALTIGLQDYAQLH-EPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRN---CSSSTYVGNVSIPLLCIS 363 (578)
Q Consensus 288 ~~~~l~~~l~~~~~~~-~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~---~s~~~~l~~I~vPvLiI~ 363 (578)
....+.. ... ........ . ++ .+......|+.. .+....+.++++|+|+|+
T Consensus 142 ----~~~~~~~--~~~~~~~~~~~~-----~------~~--------~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~ 196 (251)
T 2wtm_A 142 ----RTGELLG--LKFDPENIPDEL-----D------AW--------DGRKLKGNYVRVAQTIRVEDFVDKYTKPVLIVH 196 (251)
T ss_dssp ----HHTEETT--EECBTTBCCSEE-----E------ET--------TTEEEETHHHHHHTTCCHHHHHHHCCSCEEEEE
T ss_pred ----hhhhhcc--ccCCchhcchHH-----h------hh--------hccccchHHHHHHHccCHHHHHHhcCCCEEEEE
Confidence 0000000 000 00000000 0 00 000000111111 122234567899999999
Q ss_pred eCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhc
Q 008093 364 SLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 364 g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~ 422 (578)
|++|+++|.+.... ..+..++.++.+++++||+. .| .+..+.+.+.+||++..
T Consensus 197 G~~D~~v~~~~~~~-~~~~~~~~~~~~~~~~gH~~-~~----~~~~~~~~i~~fl~~~~ 249 (251)
T 2wtm_A 197 GDQDEAVPYEASVA-FSKQYKNCKLVTIPGDTHCY-DH----HLELVTEAVKEFMLEQI 249 (251)
T ss_dssp ETTCSSSCHHHHHH-HHHHSSSEEEEEETTCCTTC-TT----THHHHHHHHHHHHHHHH
T ss_pred eCCCCCcChHHHHH-HHHhCCCcEEEEECCCCccc-ch----hHHHHHHHHHHHHHHhc
Confidence 99999999875543 34456799999999999998 55 23358899999998654
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.91 E-value=4.9e-23 Score=207.10 Aligned_cols=266 Identities=15% Similarity=0.097 Sum_probs=160.4
Q ss_pred eEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCC
Q 008093 121 RRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGL 200 (578)
Q Consensus 121 ~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~ 200 (578)
++..+ ..||+.+.+.|..... .+..+|+||++||+++ +...| ..++..|.++||+|+++|+|||
T Consensus 21 ~~~~~-~~~~~~~~~~~~~~~~-------------~~~~~p~vv~~hG~~~-~~~~~-~~~~~~l~~~g~~v~~~d~~G~ 84 (315)
T 4f0j_A 21 HYLDF-TSQGQPLSMAYLDVAP-------------KKANGRTILLMHGKNF-CAGTW-ERTIDVLADAGYRVIAVDQVGF 84 (315)
T ss_dssp EEEEE-EETTEEEEEEEEEECC-------------SSCCSCEEEEECCTTC-CGGGG-HHHHHHHHHTTCEEEEECCTTS
T ss_pred eeEEE-ecCCCCeeEEEeecCC-------------CCCCCCeEEEEcCCCC-cchHH-HHHHHHHHHCCCeEEEeecCCC
Confidence 33334 3478888877766532 1356789999999965 44445 7889999999999999999999
Q ss_pred CCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHh
Q 008093 201 GGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIG 280 (578)
Q Consensus 201 G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~ 280 (578)
|.|+......+ ..+|+.+.+..+.+..+..+++++||||||.+++.++.++|+ +++++|+++++...........
T Consensus 85 G~s~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~ 159 (315)
T 4f0j_A 85 CKSSKPAHYQY---SFQQLAANTHALLERLGVARASVIGHSMGGMLATRYALLYPR--QVERLVLVNPIGLEDWKALGVP 159 (315)
T ss_dssp TTSCCCSSCCC---CHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHCGG--GEEEEEEESCSCSSCHHHHTCC
T ss_pred CCCCCCCcccc---CHHHHHHHHHHHHHHhCCCceEEEEecHHHHHHHHHHHhCcH--hhheeEEecCcccCCcccccch
Confidence 99976543222 234555555555555666799999999999999999999988 8999999997542211110000
Q ss_pred hHHHHHHHHHHHH---HhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCC---------CHHHHHHhCCc
Q 008093 281 RRLIQKIYDRALT---IGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFE---------TVDTYYRNCSS 348 (578)
Q Consensus 281 ~~~~~~~~~~~l~---~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~---------~~~~yy~~~s~ 348 (578)
.......+...+. ..+..+..... ...... .....+............ .........+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (315)
T 4f0j_A 160 WRSVDDWYRRDLQTSAEGIRQYQQATY--YAGEWR-------PEFDRWVQMQAGMYRGKGRESVAWNSALTYDMIFTQPV 230 (315)
T ss_dssp CCCHHHHHHHHTTCCHHHHHHHHHHHT--STTCCC-------GGGHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHCCC
T ss_pred hhhhHHHHhhcccCChHHHHHHHHHHH--hccccC-------CchHHHHHHHHHHhhccCcchhhHHHHHhcCccccchh
Confidence 0000111111000 00011100000 000000 000011110000000000 01122233445
Q ss_pred ccccCCCccceEEEEeCCCCCCCCCCc---------------chHHHhcCCCEEEEEeCCCCccccccccccCcccHHHH
Q 008093 349 STYVGNVSIPLLCISSLDDPVCTVEAI---------------PWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRA 413 (578)
Q Consensus 349 ~~~l~~I~vPvLiI~g~dDpivp~~~~---------------~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~ 413 (578)
...+.++++|+|+++|++|+++|.+.. ........+++++.+++++||+.+.+. +..+.+.
T Consensus 231 ~~~l~~~~~P~lii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~----p~~~~~~ 306 (315)
T 4f0j_A 231 VYELDRLQMPTLLLIGEKDNTAIGKDAAPAELKARLGNYAQLGKDAARRIPQATLVEFPDLGHTPQIQA----PERFHQA 306 (315)
T ss_dssp GGGGGGCCSCEEEEEETTCCCCTTGGGSCHHHHTTSCCHHHHHHHHHHHSTTEEEEEETTCCSCHHHHS----HHHHHHH
T ss_pred hhhcccCCCCeEEEEecCCCcCccccccccccccccccchhhhhHHHhhcCCceEEEeCCCCcchhhhC----HHHHHHH
Confidence 567889999999999999999994322 123455678999999999999998883 3358899
Q ss_pred HHHHHHh
Q 008093 414 VNEYLGV 420 (578)
Q Consensus 414 v~eFL~~ 420 (578)
|.+||++
T Consensus 307 i~~fl~~ 313 (315)
T 4f0j_A 307 LLEGLQT 313 (315)
T ss_dssp HHHHHCC
T ss_pred HHHHhcc
Confidence 9999864
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A | Back alignment and structure |
|---|
Probab=99.90 E-value=8.8e-23 Score=201.41 Aligned_cols=229 Identities=13% Similarity=0.127 Sum_probs=140.2
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCC-chHHHHHHHHHHHHHCCCCcEEEE
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAG-WTEDAREVIGYLHHEYPKAPLFAI 238 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~-~~~Dl~~~i~~l~~~~~~~~i~lv 238 (578)
.|+||++||++|+....| ..++..|.++||+|+++|+||||.|+... ..+... +.+|+.++++.+.. .+..+++++
T Consensus 23 ~~~vvllHG~~~~~~~~~-~~~~~~l~~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~~~~~~~~l~~-l~~~~~~l~ 99 (254)
T 2ocg_A 23 DHAVLLLPGMLGSGETDF-GPQLKNLNKKLFTVVAWDPRGYGHSRPPD-RDFPADFFERDAKDAVDLMKA-LKFKKVSLL 99 (254)
T ss_dssp SEEEEEECCTTCCHHHHC-HHHHHHSCTTTEEEEEECCTTSTTCCSSC-CCCCTTHHHHHHHHHHHHHHH-TTCSSEEEE
T ss_pred CCeEEEECCCCCCCccch-HHHHHHHhhCCCeEEEECCCCCCCCCCCC-CCCChHHHHHHHHHHHHHHHH-hCCCCEEEE
Confidence 357999999966424445 67888888889999999999999997542 222222 34566666666554 345689999
Q ss_pred EEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHH--HHHHHHHHHHHhHHHHHhhhcccccccCCHHHH
Q 008093 239 GTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRL--IQKIYDRALTIGLQDYAQLHEPRYSRLANWEGI 316 (578)
Q Consensus 239 GhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~--~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i 316 (578)
||||||.+++.+|.++|+ +|+++|+++++.............. .... ...+...+... ......
T Consensus 100 GhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-----------~~~~~~ 165 (254)
T 2ocg_A 100 GWSDGGITALIAAAKYPS--YIHKMVIWGANAYVTDEDSMIYEGIRDVSKW-SERTRKPLEAL-----------YGYDYF 165 (254)
T ss_dssp EETHHHHHHHHHHHHCTT--TEEEEEEESCCSBCCHHHHHHHHTTSCGGGS-CHHHHHHHHHH-----------HCHHHH
T ss_pred EECHhHHHHHHHHHHChH--HhhheeEeccccccChhhHHHHHHHHHHHHH-HHHhHHHHHHH-----------hcchhh
Confidence 999999999999999998 8999999987543221100000000 0000 00000000000 000000
Q ss_pred hccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCc
Q 008093 317 KKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGH 396 (578)
Q Consensus 317 ~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH 396 (578)
. ....++...+.... .. .........+.+|++|+|+|+|++|+++|.+.... ..+..++.++.+++++||
T Consensus 166 ~--~~~~~~~~~~~~~~---~~----~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~-~~~~~~~~~~~~~~~~gH 235 (254)
T 2ocg_A 166 A--RTCEKWVDGIRQFK---HL----PDGNICRHLLPRVQCPALIVHGEKDPLVPRFHADF-IHKHVKGSRLHLMPEGKH 235 (254)
T ss_dssp H--HHHHHHHHHHHGGG---GS----GGGBSSGGGGGGCCSCEEEEEETTCSSSCHHHHHH-HHHHSTTCEEEEETTCCT
T ss_pred H--HHHHHHHHHHHHHH---hc----cCCchhhhhhhcccCCEEEEecCCCccCCHHHHHH-HHHhCCCCEEEEcCCCCC
Confidence 0 00011111000000 00 00011235678899999999999999999775443 455678899999999999
Q ss_pred cccccccccCcccHHHHHHHHHH
Q 008093 397 LAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 397 ~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
+.++|. +..+.+.|.+||+
T Consensus 236 ~~~~e~----p~~~~~~i~~fl~ 254 (254)
T 2ocg_A 236 NLHLRF----ADEFNKLAEDFLQ 254 (254)
T ss_dssp THHHHT----HHHHHHHHHHHHC
T ss_pred chhhhC----HHHHHHHHHHHhC
Confidence 999883 3468899999973
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A | Back alignment and structure |
|---|
Probab=99.90 E-value=7.2e-24 Score=212.44 Aligned_cols=237 Identities=15% Similarity=0.138 Sum_probs=141.6
Q ss_pred cEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEE
Q 008093 161 PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGT 240 (578)
Q Consensus 161 PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGh 240 (578)
|+||++||+++ +...| ..++..|.++||+|+++|+||||.|+..........+.+|+.++++++. ..+++++||
T Consensus 24 ~pvvllHG~~~-~~~~~-~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~a~dl~~~l~~l~----~~~~~lvGh 97 (277)
T 1brt_A 24 QPVVLIHGFPL-SGHSW-ERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAADLNTVLETLD----LQDAVLVGF 97 (277)
T ss_dssp SEEEEECCTTC-CGGGG-HHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHHT----CCSEEEEEE
T ss_pred CeEEEECCCCC-cHHHH-HHHHHHHhhCCCEEEEeCCCCCCCCCCCCCCccHHHHHHHHHHHHHHhC----CCceEEEEE
Confidence 45999999965 44455 6788999999999999999999999764322222345578888777763 458999999
Q ss_pred chHHHHHHHHHhhcCCCCCccEEEEEcCCcch--hhhhHH---HhhHHHHHHHHHHHH---HhHHHHHhhhccc---ccc
Q 008093 241 SIGANILVKYLGEEGEKTPVAGAAAICSPWDL--LIGDRF---IGRRLIQKIYDRALT---IGLQDYAQLHEPR---YSR 309 (578)
Q Consensus 241 SmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~--~~~~~~---l~~~~~~~~~~~~l~---~~l~~~~~~~~~~---l~~ 309 (578)
||||.+++.+|.++|+. +|+++|++++.... ...... ........+...... ..+.......... ...
T Consensus 98 S~Gg~va~~~a~~~p~~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (277)
T 1brt_A 98 STGTGEVARYVSSYGTA-RIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGT 176 (277)
T ss_dssp GGGHHHHHHHHHHHCST-TEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHTTHHHHBTT
T ss_pred CccHHHHHHHHHHcCcc-eEEEEEEecCcCccccccccCccccccHHHHHHHHHHHhcCchhhHHHHHHHHhhccccccc
Confidence 99999999999999852 69999999863211 100000 000000000000000 0000000000000 000
Q ss_pred cCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHH-----hCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCC
Q 008093 310 LANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYR-----NCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANK 384 (578)
Q Consensus 310 ~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~-----~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~ 384 (578)
....+. ...+...... . ....++. .......+.+|++|+|+|+|++|+++|.+.......+..+
T Consensus 177 ~~~~~~------~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~ 245 (277)
T 1brt_A 177 RISEEA------VRNSWNTAAS--G---GFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALP 245 (277)
T ss_dssp TBCHHH------HHHHHHHHHH--S---CHHHHHHGGGGTTCCCTTTGGGCCSCEEEEEETTCSSSCGGGTHHHHHHHCT
T ss_pred cCCHHH------HHHHHHHHhc--c---chHHHHHHHHHHhccchhhcccCCCCeEEEecCCCccCChHHHHHHHHHHCC
Confidence 000000 0000000000 0 0011110 1123346788999999999999999998765233456678
Q ss_pred CEEEEEeCCCCccccccccccCcccHHHHHHHHHH
Q 008093 385 NVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 385 ~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
+.++.+++++||+.++|. | ..+.+.|.+||+
T Consensus 246 ~~~~~~i~~~gH~~~~e~--p--~~~~~~i~~fl~ 276 (277)
T 1brt_A 246 SAEYVEVEGAPHGLLWTH--A--EEVNTALLAFLA 276 (277)
T ss_dssp TSEEEEETTCCTTHHHHT--H--HHHHHHHHHHHH
T ss_pred CCcEEEeCCCCcchhhhC--H--HHHHHHHHHHHh
Confidence 999999999999999883 3 358899999986
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.5e-23 Score=209.32 Aligned_cols=254 Identities=13% Similarity=0.063 Sum_probs=150.9
Q ss_pred cCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCC
Q 008093 128 SDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITS 207 (578)
Q Consensus 128 ~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~ 207 (578)
.||..+.+....++ +..+|+||++||+++ +...| ..++..|.+ +|+|+++|+||||.|+...
T Consensus 9 ~~g~~l~y~~~g~~---------------~~~~~~vvllHG~~~-~~~~~-~~~~~~L~~-~~~vi~~D~~G~G~S~~~~ 70 (266)
T 2xua_A 9 VNGTELHYRIDGER---------------HGNAPWIVLSNSLGT-DLSMW-APQVAALSK-HFRVLRYDTRGHGHSEAPK 70 (266)
T ss_dssp CSSSEEEEEEESCS---------------SSCCCEEEEECCTTC-CGGGG-GGGHHHHHT-TSEEEEECCTTSTTSCCCS
T ss_pred ECCEEEEEEEcCCc---------------cCCCCeEEEecCccC-CHHHH-HHHHHHHhc-CeEEEEecCCCCCCCCCCC
Confidence 37888877654321 112678999999955 44455 678888865 5999999999999997643
Q ss_pred CCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHH
Q 008093 208 DCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKI 287 (578)
Q Consensus 208 ~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~ 287 (578)
.......+.+|+.++++++. ..+++++||||||.+++.+|.++|+ +|+++|+++++........+... ....
T Consensus 71 ~~~~~~~~~~dl~~~l~~l~----~~~~~lvGhS~Gg~va~~~A~~~p~--~v~~lvl~~~~~~~~~~~~~~~~--~~~~ 142 (266)
T 2xua_A 71 GPYTIEQLTGDVLGLMDTLK----IARANFCGLSMGGLTGVALAARHAD--RIERVALCNTAARIGSPEVWVPR--AVKA 142 (266)
T ss_dssp SCCCHHHHHHHHHHHHHHTT----CCSEEEEEETHHHHHHHHHHHHCGG--GEEEEEEESCCSSCSCHHHHHHH--HHHH
T ss_pred CCCCHHHHHHHHHHHHHhcC----CCceEEEEECHHHHHHHHHHHhChh--hhheeEEecCCCCCCchHHHHHH--HHHH
Confidence 22212344567777776653 4589999999999999999999998 89999999876533211111100 0000
Q ss_pred HHHHHHHhHHHHHhhh-cccccccCCHHHHhccCCHHHHHhhhhh-ccCCCCCHHHHHHhCCcccccCCCccceEEEEeC
Q 008093 288 YDRALTIGLQDYAQLH-EPRYSRLANWEGIKKSRSIRDFDSHATC-LVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSL 365 (578)
Q Consensus 288 ~~~~l~~~l~~~~~~~-~~~l~~~~d~~~i~~~~s~~efd~~~~~-~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~ 365 (578)
....+........... .+.+.. .+.+. ...+...+.. ...++...............+.+|++|+|+|+|+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~ 215 (266)
T 2xua_A 143 RTEGMHALADAVLPRWFTADYME-REPVV------LAMIRDVFVHTDKEGYASNCEAIDAADLRPEAPGIKVPALVISGT 215 (266)
T ss_dssp HHHCHHHHHHHHHHHHSCHHHHH-HCHHH------HHHHHHHHHTSCHHHHHHHHHHHHHCCCGGGGGGCCSCEEEEEET
T ss_pred HhcChHHHHHHHHHHHcCccccc-CCHHH------HHHHHHHHhhCCHHHHHHHHHHHhccCchhhhccCCCCEEEEEcC
Confidence 0000000000000000 000000 00000 0001111000 0000111111122233445678899999999999
Q ss_pred CCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHh
Q 008093 366 DDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 366 dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
+|+++|.+.... ..+..++.++.+++ +||+.++|. | ..+.+.|.+||++
T Consensus 216 ~D~~~~~~~~~~-~~~~~~~~~~~~~~-~gH~~~~e~--p--~~~~~~i~~fl~~ 264 (266)
T 2xua_A 216 HDLAATPAQGRE-LAQAIAGARYVELD-ASHISNIER--A--DAFTKTVVDFLTE 264 (266)
T ss_dssp TCSSSCHHHHHH-HHHHSTTCEEEEES-CCSSHHHHT--H--HHHHHHHHHHHTC
T ss_pred CCCcCCHHHHHH-HHHhCCCCEEEEec-CCCCchhcC--H--HHHHHHHHHHHHh
Confidence 999999765433 45567888999999 999999883 3 3588999999875
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} | Back alignment and structure |
|---|
Probab=99.90 E-value=2e-23 Score=205.44 Aligned_cols=250 Identities=16% Similarity=0.057 Sum_probs=157.1
Q ss_pred CeeEEEEEe---cCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEE
Q 008093 119 SYRRQLFRL---SDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVS 195 (578)
Q Consensus 119 ~y~r~~l~~---~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~ 195 (578)
+.+.+.++. .||..+.+....+. ++.+|+||++||++++...++...+...+.+.||+|+++
T Consensus 8 ~~~~~~~~~~~~~~g~~l~~~~~~~~---------------~~~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~ 72 (270)
T 3llc_A 8 PIETHAITVGQGSDARSIAALVRAPA---------------QDERPTCIWLGGYRSDMTGTKALEMDDLAASLGVGAIRF 72 (270)
T ss_dssp CEEEEEEEESSGGGCEEEEEEEECCS---------------STTSCEEEEECCTTCCTTSHHHHHHHHHHHHHTCEEEEE
T ss_pred CCCcceEEEeeccCcceEEEEeccCC---------------CCCCCeEEEECCCccccccchHHHHHHHHHhCCCcEEEe
Confidence 345566655 79999987754331 134789999999977655555466788888889999999
Q ss_pred eCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhh---cC---CCCCccEEEEEcCC
Q 008093 196 NHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGE---EG---EKTPVAGAAAICSP 269 (578)
Q Consensus 196 D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~---~p---~~~~V~~~Vlis~p 269 (578)
|+||||.|+..........+.+|+.++++++. ..+++++||||||.+++.++.. +| + +++++|+++++
T Consensus 73 d~~G~G~s~~~~~~~~~~~~~~d~~~~~~~l~----~~~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~--~v~~~il~~~~ 146 (270)
T 3llc_A 73 DYSGHGASGGAFRDGTISRWLEEALAVLDHFK----PEKAILVGSSMGGWIALRLIQELKARHDNPT--QVSGMVLIAPA 146 (270)
T ss_dssp CCTTSTTCCSCGGGCCHHHHHHHHHHHHHHHC----CSEEEEEEETHHHHHHHHHHHHHHTCSCCSC--EEEEEEEESCC
T ss_pred ccccCCCCCCccccccHHHHHHHHHHHHHHhc----cCCeEEEEeChHHHHHHHHHHHHHhcccccc--ccceeEEecCc
Confidence 99999999765332222344567777777764 5689999999999999999999 88 6 89999999988
Q ss_pred cchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcc
Q 008093 270 WDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSS 349 (578)
Q Consensus 270 ~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~ 349 (578)
.+....... ..+....... +.. ............. ...........+......
T Consensus 147 ~~~~~~~~~--~~~~~~~~~~-----~~~---~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~ 199 (270)
T 3llc_A 147 PDFTSDLIE--PLLGDRERAE-----LAE---NGYFEEVSEYSPE-----------------PNIFTRALMEDGRANRVM 199 (270)
T ss_dssp TTHHHHTTG--GGCCHHHHHH-----HHH---HSEEEECCTTCSS-----------------CEEEEHHHHHHHHHTCCT
T ss_pred ccchhhhhh--hhhhhhhhhh-----hhc---cCcccChhhcccc-----------------hhHHHHHHHhhhhhhhhh
Confidence 765432100 0000000000 000 0000000000000 000000111222233345
Q ss_pred cccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCC--EEEEEeCCCCccccccccccCcccHHHHHHHHHHh
Q 008093 350 TYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKN--VVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 350 ~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~--~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
..+.++++|+|+++|++|+++|.+.... .....++ +++.+++++||....+ .....+.+.+.+||+.
T Consensus 200 ~~~~~~~~P~l~i~g~~D~~v~~~~~~~-~~~~~~~~~~~~~~~~~~gH~~~~~---~~~~~~~~~i~~fl~~ 268 (270)
T 3llc_A 200 AGMIDTGCPVHILQGMADPDVPYQHALK-LVEHLPADDVVLTLVRDGDHRLSRP---QDIDRMRNAIRAMIEP 268 (270)
T ss_dssp TSCCCCCSCEEEEEETTCSSSCHHHHHH-HHHTSCSSSEEEEEETTCCSSCCSH---HHHHHHHHHHHHHHC-
T ss_pred hhhhcCCCCEEEEecCCCCCCCHHHHHH-HHHhcCCCCeeEEEeCCCccccccc---ccHHHHHHHHHHHhcC
Confidence 6788999999999999999999775443 3344455 9999999999954332 1223567777777763
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.9e-22 Score=203.79 Aligned_cols=255 Identities=13% Similarity=0.066 Sum_probs=150.1
Q ss_pred EEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCC
Q 008093 124 LFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGV 203 (578)
Q Consensus 124 ~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S 203 (578)
.+...||..+.+.-..+ +++|+||++||+++++...| +.++..| ..||+|+++|+||||.|
T Consensus 6 ~~~~~~g~~l~~~~~G~-----------------~~~~~vvllHG~~~~~~~~w-~~~~~~L-~~~~~vi~~Dl~G~G~S 66 (286)
T 2yys_A 6 GYVPVGEAELYVEDVGP-----------------VEGPALFVLHGGPGGNAYVL-REGLQDY-LEGFRVVYFDQRGSGRS 66 (286)
T ss_dssp EEEECSSCEEEEEEESC-----------------TTSCEEEEECCTTTCCSHHH-HHHHGGG-CTTSEEEEECCTTSTTS
T ss_pred eEEeECCEEEEEEeecC-----------------CCCCEEEEECCCCCcchhHH-HHHHHHh-cCCCEEEEECCCCCCCC
Confidence 34456888887654322 24578999999965444145 6777777 45899999999999999
Q ss_pred CC-CCCC-CCC-CCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHh
Q 008093 204 SI-TSDC-FYN-AGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIG 280 (578)
Q Consensus 204 ~~-~~~~-~~~-~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~ 280 (578)
+. .... .++ ..+.+|+.++++++ +..+++++||||||.+++.+|.++|+ |+++|+++++.........+.
T Consensus 67 ~~~~~~~~~~~~~~~a~dl~~ll~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p~---v~~lvl~~~~~~~~~~~~~~~ 139 (286)
T 2yys_A 67 LELPQDPRLFTVDALVEDTLLLAEAL----GVERFGLLAHGFGAVVALEVLRRFPQ---AEGAILLAPWVNFPWLAARLA 139 (286)
T ss_dssp CCCCSCGGGCCHHHHHHHHHHHHHHT----TCCSEEEEEETTHHHHHHHHHHHCTT---EEEEEEESCCCBHHHHHHHHH
T ss_pred CCCccCcccCcHHHHHHHHHHHHHHh----CCCcEEEEEeCHHHHHHHHHHHhCcc---hheEEEeCCccCcHHHHHHHH
Confidence 76 3220 222 34456776666665 34689999999999999999999876 899999998653221000000
Q ss_pred hHH-------HHHHHHHHHH-HhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHH--HH---hCC
Q 008093 281 RRL-------IQKIYDRALT-IGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTY--YR---NCS 347 (578)
Q Consensus 281 ~~~-------~~~~~~~~l~-~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~y--y~---~~s 347 (578)
... ....+...+. ........... . ........ ....+..+ ... ........ +. ...
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~---~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~ 209 (286)
T 2yys_A 140 EAAGLAPLPDPEENLKEALKREEPKALFDRLM-F----PTPRGRMA---YEWLAEGA-GIL-GSDAPGLAFLRNGLWRLD 209 (286)
T ss_dssp HHTTCCCCSCHHHHHHHHHHHSCHHHHHHHHH-C----SSHHHHHH---HHHHHHHT-TCC-CCSHHHHHHHHTTGGGCB
T ss_pred HHhccccchhHHHHHHHHhccCChHHHHHhhh-c----cCCccccC---hHHHHHHH-hhc-cccccchhhcccccccCC
Confidence 000 0000000000 00000000000 0 00000000 00000000 000 00001111 11 112
Q ss_pred cccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 348 SSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 348 ~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
....+.+|++|+|+|+|++|++++.+ ... ..+ .++.++.+++++||+.++|. | ..+.+.|.+||+++
T Consensus 210 ~~~~l~~i~~P~lvi~G~~D~~~~~~-~~~-~~~-~~~~~~~~i~~~gH~~~~e~--p--~~~~~~i~~fl~~~ 276 (286)
T 2yys_A 210 YTPYLTPERRPLYVLVGERDGTSYPY-AEE-VAS-RLRAPIRVLPEAGHYLWIDA--P--EAFEEAFKEALAAL 276 (286)
T ss_dssp CGGGCCCCSSCEEEEEETTCTTTTTT-HHH-HHH-HHTCCEEEETTCCSSHHHHC--H--HHHHHHHHHHHHTT
T ss_pred hhhhhhhcCCCEEEEEeCCCCcCCHh-HHH-HHh-CCCCCEEEeCCCCCCcChhh--H--HHHHHHHHHHHHhh
Confidence 33568899999999999999999988 544 455 67889999999999999983 3 36899999999864
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A | Back alignment and structure |
|---|
Probab=99.90 E-value=8.1e-23 Score=201.98 Aligned_cols=228 Identities=12% Similarity=0.156 Sum_probs=139.8
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEE
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIG 239 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG 239 (578)
.|+||++||+++++. .| +.+++.|.++||+|+++|+||||.|+..........+.+|+.++++.+... +..+++++|
T Consensus 16 ~~~vvllHG~~~~~~-~~-~~~~~~L~~~g~~vi~~D~~GhG~s~~~~~~~~~~~~~~d~~~~~~~l~~~-~~~~~~lvG 92 (247)
T 1tqh_A 16 ERAVLLLHGFTGNSA-DV-RMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQDVMNGYEFLKNK-GYEKIAVAG 92 (247)
T ss_dssp SCEEEEECCTTCCTH-HH-HHHHHHHHHTTCEEEECCCTTSSSCHHHHTTCCHHHHHHHHHHHHHHHHHH-TCCCEEEEE
T ss_pred CcEEEEECCCCCChH-HH-HHHHHHHHHCCCEEEecccCCCCCCHHHhcCCCHHHHHHHHHHHHHHHHHc-CCCeEEEEE
Confidence 467999999966544 45 778899988999999999999997643211111134557888888887664 345899999
Q ss_pred EchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhcc
Q 008093 240 TSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKS 319 (578)
Q Consensus 240 hSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~ 319 (578)
|||||.+++.+|.++| |+++|++++|........ ..... ...... +..... .+.+.+..
T Consensus 93 ~SmGG~ia~~~a~~~p----v~~lvl~~~~~~~~~~~~-~~~~~-~~~~~~-----~~~~~~---------~~~~~~~~- 151 (247)
T 1tqh_A 93 LSLGGVFSLKLGYTVP----IEGIVTMCAPMYIKSEET-MYEGV-LEYARE-----YKKREG---------KSEEQIEQ- 151 (247)
T ss_dssp ETHHHHHHHHHHTTSC----CSCEEEESCCSSCCCHHH-HHHHH-HHHHHH-----HHHHHT---------CCHHHHHH-
T ss_pred eCHHHHHHHHHHHhCC----CCeEEEEcceeecCcchh-hhHHH-HHHHHH-----hhcccc---------cchHHHHh-
Confidence 9999999999999875 788998887764321111 00000 000000 000000 00000000
Q ss_pred CCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCC--CEEEEEeCCCCcc
Q 008093 320 RSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANK--NVVLATTWHGGHL 397 (578)
Q Consensus 320 ~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~--~~~l~~~~~GGH~ 397 (578)
....+... ....+.....+. .+....+.+|++|+|+|+|++|+++|.+.... ..+..+ ++++.+++++||+
T Consensus 152 -~~~~~~~~---~~~~~~~~~~~~--~~~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~-~~~~~~~~~~~~~~~~~~gH~ 224 (247)
T 1tqh_A 152 -EMEKFKQT---PMKTLKALQELI--ADVRDHLDLIYAPTFVVQARHDEMINPDSANI-IYNEIESPVKQIKWYEQSGHV 224 (247)
T ss_dssp -HHHHHTTS---CCTTHHHHHHHH--HHHHHTGGGCCSCEEEEEETTCSSSCTTHHHH-HHHHCCCSSEEEEEETTCCSS
T ss_pred -hhhcccCC---CHHHHHHHHHHH--HHHHhhcccCCCCEEEEecCCCCCCCcchHHH-HHHhcCCCceEEEEeCCCcee
Confidence 00000000 000000011111 01234678899999999999999999886544 233344 4799999999999
Q ss_pred ccccccccCcccHHHHHHHHHHhh
Q 008093 398 AFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 398 ~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
.+.|. ++..+.+.|.+||++.
T Consensus 225 ~~~e~---~~~~~~~~i~~Fl~~~ 245 (247)
T 1tqh_A 225 ITLDQ---EKDQLHEDIYAFLESL 245 (247)
T ss_dssp GGGST---THHHHHHHHHHHHHHS
T ss_pred eccCc---cHHHHHHHHHHHHHhc
Confidence 99872 2346899999999864
|
| >3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=99.90 E-value=3.3e-22 Score=191.12 Aligned_cols=200 Identities=17% Similarity=0.147 Sum_probs=153.8
Q ss_pred CeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCC---CCCCccHHHHHHHHHHHhCCceEEEE
Q 008093 119 SYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGL---TSDSAASYIRHLVFNTAKRGWNVVVS 195 (578)
Q Consensus 119 ~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl---~G~s~~~yi~~l~~~l~~~Gy~Vvv~ 195 (578)
..++..++..|| ++...++.+.+ ...+|+||++||. +++....++..++..+.++||+|+++
T Consensus 5 ~~~~~~~~~~~g-~l~~~~~~p~~--------------~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~ 69 (208)
T 3trd_A 5 TNEDFLIQGPVG-QLEVMITRPKG--------------IEKSVTGIICHPHPLHGGTMNNKVVTTLAKALDELGLKTVRF 69 (208)
T ss_dssp SSSCEEEECSSS-EEEEEEECCSS--------------CCCSEEEEEECSCGGGTCCTTCHHHHHHHHHHHHTTCEEEEE
T ss_pred ccceEEEECCCc-eEEEEEEcCCC--------------CCCCCEEEEEcCCCCCCCccCCchHHHHHHHHHHCCCEEEEE
Confidence 457788999999 88877766532 2467999999994 34444455588999999999999999
Q ss_pred eCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhh
Q 008093 196 NHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIG 275 (578)
Q Consensus 196 D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~ 275 (578)
|+||+|.+..... ......+|+.++++++.++++..+++++||||||.+++.++ .++ +++++|+++++.+..
T Consensus 70 d~~g~g~s~~~~~--~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a-~~~---~v~~~v~~~~~~~~~-- 141 (208)
T 3trd_A 70 NFRGVGKSQGRYD--NGVGEVEDLKAVLRWVEHHWSQDDIWLAGFSFGAYISAKVA-YDQ---KVAQLISVAPPVFYE-- 141 (208)
T ss_dssp CCTTSTTCCSCCC--TTTHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHH-HHS---CCSEEEEESCCTTSG--
T ss_pred ecCCCCCCCCCcc--chHHHHHHHHHHHHHHHHhCCCCeEEEEEeCHHHHHHHHHh-ccC---CccEEEEeccccccC--
Confidence 9999999875421 22345789999999999998888999999999999999999 665 599999998775100
Q ss_pred hHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCC
Q 008093 276 DRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNV 355 (578)
Q Consensus 276 ~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I 355 (578)
....+..+
T Consensus 142 ------------------------------------------------------------------------~~~~~~~~ 149 (208)
T 3trd_A 142 ------------------------------------------------------------------------GFASLTQM 149 (208)
T ss_dssp ------------------------------------------------------------------------GGTTCCSC
T ss_pred ------------------------------------------------------------------------Cchhhhhc
Confidence 00234456
Q ss_pred ccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHH
Q 008093 356 SIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYL 418 (578)
Q Consensus 356 ~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL 418 (578)
++|+|+++|++|+++|.+...........++++.+++++||....+ . ..+.+.+.+||
T Consensus 150 ~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~---~--~~~~~~i~~fl 207 (208)
T 3trd_A 150 ASPWLIVQGDQDEVVPFEQVKAFVNQISSPVEFVVMSGASHFFHGR---L--IELRELLVRNL 207 (208)
T ss_dssp CSCEEEEEETTCSSSCHHHHHHHHHHSSSCCEEEEETTCCSSCTTC---H--HHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCCCHHHHHHHHHHccCceEEEEeCCCCCccccc---H--HHHHHHHHHHh
Confidence 8999999999999999876554333444449999999999987654 1 35777788876
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.4e-23 Score=209.77 Aligned_cols=240 Identities=16% Similarity=0.142 Sum_probs=140.9
Q ss_pred cEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEE
Q 008093 161 PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGT 240 (578)
Q Consensus 161 PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGh 240 (578)
++||++||+++ +...| ..++..|.++||+|+++|+||||.|+..........+.+|+.++++++. ..+++++||
T Consensus 24 ~pvvllHG~~~-~~~~~-~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~~l~~l~----~~~~~lvGh 97 (279)
T 1hkh_A 24 QPVVLIHGYPL-DGHSW-ERQTRELLAQGYRVITYDRRGFGGSSKVNTGYDYDTFAADLHTVLETLD----LRDVVLVGF 97 (279)
T ss_dssp EEEEEECCTTC-CGGGG-HHHHHHHHHTTEEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHHT----CCSEEEEEE
T ss_pred CcEEEEcCCCc-hhhHH-hhhHHHHHhCCcEEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcC----CCceEEEEe
Confidence 45999999965 44445 6788999999999999999999999765322222345577777777663 458999999
Q ss_pred chHHHHHHHHHhhcCCCCCccEEEEEcCCcch--hhhh--HHHhhHHHHHHHHHHHH---HhHHHHHhhhccc---cccc
Q 008093 241 SIGANILVKYLGEEGEKTPVAGAAAICSPWDL--LIGD--RFIGRRLIQKIYDRALT---IGLQDYAQLHEPR---YSRL 310 (578)
Q Consensus 241 SmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~--~~~~--~~l~~~~~~~~~~~~l~---~~l~~~~~~~~~~---l~~~ 310 (578)
||||.+++.+|.++|+. +|+++|++++.... .... ..........+...... ..+.......... ....
T Consensus 98 S~Gg~va~~~a~~~p~~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (279)
T 1hkh_A 98 SMGTGELARYVARYGHE-RVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWFTDFYKNFYNLDENLGSR 176 (279)
T ss_dssp THHHHHHHHHHHHHCST-TEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHTHHHHBTTT
T ss_pred ChhHHHHHHHHHHcCcc-ceeeEEEEccCCcccccCcCCcCCCcHHHHHHHHHHhhhhhhhhHHHHHhhhhhcccCCccc
Confidence 99999999999999852 69999999873211 0000 00000000000000000 0000000000000 0000
Q ss_pred CCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHH--hCCcccccCCC---ccceEEEEeCCCCCCCCCCcchHHHhcCCC
Q 008093 311 ANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYR--NCSSSTYVGNV---SIPLLCISSLDDPVCTVEAIPWDECRANKN 385 (578)
Q Consensus 311 ~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~--~~s~~~~l~~I---~vPvLiI~g~dDpivp~~~~~~~~~~~~~~ 385 (578)
...+. ...+..... ............ ..+....+.+| ++|+|+|+|++|+++|.+.......+..++
T Consensus 177 ~~~~~------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~ 248 (279)
T 1hkh_A 177 ISEQA------VTGSWNVAI--GSAPVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQAVPE 248 (279)
T ss_dssp BCHHH------HHHHHHHHH--TSCTTHHHHTHHHHTCBCHHHHHHHHHHCCCEEEEEETTCSSSCTTTTHHHHHHHCTT
T ss_pred ccHHH------HHhhhhhhc--cCcHHHHHHHHHHHhhchhhhHHHhccCCCCEEEEEcCCCccCChHHHHHHHHHhCCC
Confidence 00000 000000000 001110000000 11222345667 999999999999999988652335566789
Q ss_pred EEEEEeCCCCccccccccccCcccHHHHHHHHHH
Q 008093 386 VVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 386 ~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
.++.+++++||+.++|. | ..+.+.|.+||+
T Consensus 249 ~~~~~i~~~gH~~~~e~--p--~~~~~~i~~fl~ 278 (279)
T 1hkh_A 249 ADYVEVEGAPHGLLWTH--A--DEVNAALKTFLA 278 (279)
T ss_dssp SEEEEETTCCTTHHHHT--H--HHHHHHHHHHHH
T ss_pred eeEEEeCCCCccchhcC--H--HHHHHHHHHHhh
Confidence 99999999999999883 3 358899999986
|
| >1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.8e-22 Score=209.24 Aligned_cols=290 Identities=13% Similarity=0.123 Sum_probs=167.3
Q ss_pred CCCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHH----HHHHHHHHHhCCceE
Q 008093 117 CFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASY----IRHLVFNTAKRGWNV 192 (578)
Q Consensus 117 ~~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~y----i~~l~~~l~~~Gy~V 192 (578)
..+++...+++.||..+.+.++.+.... . .....+|+||++||+++++..+. ...++..|+++||+|
T Consensus 24 ~~~~~~~~~~~~dG~~l~~~~~~~~~~~--------~-~~~~~~~~vvl~HG~~~~~~~~~~~~~~~~~a~~l~~~G~~v 94 (377)
T 1k8q_A 24 GYPAEEYEVVTEDGYILGIDRIPYGRKN--------S-ENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDV 94 (377)
T ss_dssp TCCCEEEEEECTTSEEEEEEEECSCSSC--------C-TTTTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEE
T ss_pred CCCceEEEeEcCCCCEEEEEEecCCCCC--------c-cccCCCCeEEEECCCCCchhhhhcCCCcccHHHHHHHCCCCE
Confidence 3566888899999999988776543210 0 00136789999999966544321 134555888999999
Q ss_pred EEEeCCCCCCCCCC-----CCC---CCC-CCchH-HHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCC-CCcc
Q 008093 193 VVSNHRGLGGVSIT-----SDC---FYN-AGWTE-DAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEK-TPVA 261 (578)
Q Consensus 193 vv~D~RG~G~S~~~-----~~~---~~~-~~~~~-Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~-~~V~ 261 (578)
+++|+||||.|... ... .+. ..+.+ |+.++++++.+..+..+++++||||||.+++.++.++|+. .+|+
T Consensus 95 i~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~v~ 174 (377)
T 1k8q_A 95 WLGNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIK 174 (377)
T ss_dssp EECCCTTSTTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCHHHHTTEE
T ss_pred EEecCCCCCCCCCCCCCCCCcccccCccHHHHHhhhHHHHHHHHHHhcCcCceEEEEechhhHHHHHHHhcCchhhhhhh
Confidence 99999999999752 111 112 23345 8999999988877778999999999999999999988741 1499
Q ss_pred EEEEEcCCcchhhhhHHH---hh------------------HHHHHHHHHH---------HHHhHHHHHhhhcccccccC
Q 008093 262 GAAAICSPWDLLIGDRFI---GR------------------RLIQKIYDRA---------LTIGLQDYAQLHEPRYSRLA 311 (578)
Q Consensus 262 ~~Vlis~p~d~~~~~~~l---~~------------------~~~~~~~~~~---------l~~~l~~~~~~~~~~l~~~~ 311 (578)
++|+++++.......... .. .......... +...+......... ...
T Consensus 175 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 251 (377)
T 1k8q_A 175 TFYALAPVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDT---MNL 251 (377)
T ss_dssp EEEEESCCSCCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCG---GGS
T ss_pred EEEEeCCchhcccchhHHHHHHhhccHHHHhhcCccccCcHHHHHHHHHHHhhCCccHHHHHHHHHHHhcCCCc---ccC
Confidence 999999865432110000 00 0000000000 00000000000000 000
Q ss_pred CHH---HHhc----cCC---HHHHHhhhhhc-cCCCC------CHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCC
Q 008093 312 NWE---GIKK----SRS---IRDFDSHATCL-VGKFE------TVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEA 374 (578)
Q Consensus 312 d~~---~i~~----~~s---~~efd~~~~~~-~~g~~------~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~ 374 (578)
+.. .... ... +..+....... ...+. ....|.........+.+|++|+|+|+|++|+++|.+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~ 331 (377)
T 1k8q_A 252 NMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHD 331 (377)
T ss_dssp CGGGHHHHHTTCCCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSCHHH
T ss_pred CHHHHHHHhccCCCCccHHHHHHHHHHHhcCCeeeccCCcchhhHHHcCCCCCcccCHhhCCCCEEEEEeCCCcccCHHH
Confidence 000 0000 000 11111111100 11111 1111111112234588999999999999999999875
Q ss_pred cchHHHhcCCCEE-EEEeCCCCccccccccccCcccHHHHHHHHHHh
Q 008093 375 IPWDECRANKNVV-LATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 375 ~~~~~~~~~~~~~-l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
... ..+..++.. +.+++++||+.++.+. ..+..+.+.|.+||++
T Consensus 332 ~~~-~~~~~~~~~~~~~~~~~gH~~~~~~~-~~~~~~~~~i~~fl~~ 376 (377)
T 1k8q_A 332 VDL-LLSKLPNLIYHRKIPPYNHLDFIWAM-DAPQAVYNEIVSMMGT 376 (377)
T ss_dssp HHH-HHTTCTTEEEEEEETTCCTTHHHHCT-THHHHTHHHHHHHHHT
T ss_pred HHH-HHHhCcCcccEEecCCCCceEEEecC-CcHHHHHHHHHHHhcc
Confidence 543 455667777 9999999999997321 1223578899999874
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} | Back alignment and structure |
|---|
Probab=99.90 E-value=5.1e-23 Score=206.40 Aligned_cols=267 Identities=11% Similarity=0.105 Sum_probs=157.6
Q ss_pred CCCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEe
Q 008093 117 CFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSN 196 (578)
Q Consensus 117 ~~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D 196 (578)
..+++...++. ||..+.+.... ++|+||++||+++ +...| ..++..|..+||+|+++|
T Consensus 6 ~~~~~~~~~~~-~g~~l~~~~~g-------------------~~~~vv~~HG~~~-~~~~~-~~~~~~l~~~g~~v~~~d 63 (309)
T 3u1t_A 6 EFPFAKRTVEV-EGATIAYVDEG-------------------SGQPVLFLHGNPT-SSYLW-RNIIPYVVAAGYRAVAPD 63 (309)
T ss_dssp CCCCCCEEEEE-TTEEEEEEEEE-------------------CSSEEEEECCTTC-CGGGG-TTTHHHHHHTTCEEEEEC
T ss_pred cccccceEEEE-CCeEEEEEEcC-------------------CCCEEEEECCCcc-hhhhH-HHHHHHHHhCCCEEEEEc
Confidence 34556666666 77777754321 2578999999965 44445 678888778899999999
Q ss_pred CCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhh--
Q 008093 197 HRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLI-- 274 (578)
Q Consensus 197 ~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~-- 274 (578)
+||||.|+..........+.+|+.++++.+ +..+++++||||||.+++.++..+|+ +|+++|+++++.....
T Consensus 64 ~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lvl~~~~~~~~~~~ 137 (309)
T 3u1t_A 64 LIGMGDSAKPDIEYRLQDHVAYMDGFIDAL----GLDDMVLVIHDWGSVIGMRHARLNPD--RVAAVAFMEALVPPALPM 137 (309)
T ss_dssp CTTSTTSCCCSSCCCHHHHHHHHHHHHHHH----TCCSEEEEEEEHHHHHHHHHHHHCTT--TEEEEEEEEESCTTTCSB
T ss_pred cCCCCCCCCCCcccCHHHHHHHHHHHHHHc----CCCceEEEEeCcHHHHHHHHHHhChH--hheEEEEeccCCCCcccc
Confidence 999999987543222233445666655554 44689999999999999999999998 8999999997544320
Q ss_pred -hhHHHhhHHHHHHHHHHHHHhHH--------HHHhhhccc--ccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHH
Q 008093 275 -GDRFIGRRLIQKIYDRALTIGLQ--------DYAQLHEPR--YSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYY 343 (578)
Q Consensus 275 -~~~~l~~~~~~~~~~~~l~~~l~--------~~~~~~~~~--l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy 343 (578)
........ ....+......... .+.....+. .......+.. ..+...+..+ ........++
T Consensus 138 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~-~~~~~~~~~~ 209 (309)
T 3u1t_A 138 PSYEAMGPQ-LGPLFRDLRTADVGEKMVLDGNFFVETILPEMGVVRSLSEAEM------AAYRAPFPTR-QSRLPTLQWP 209 (309)
T ss_dssp SCSGGGHHH-HHHHHHHHTSTTHHHHHHTTTCHHHHTHHHHTSCSSCCCHHHH------HHHHTTCCST-GGGHHHHHHH
T ss_pred ccccccchh-hhHHHHHHhccchhhhhccccceehhhhcccccccccCCHHHH------HHHHHhcCCc-cccchHHHHH
Confidence 00000000 00111110000000 000000000 0000000000 0000000000 0000111111
Q ss_pred HhC--------------CcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCccc
Q 008093 344 RNC--------------SSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMW 409 (578)
Q Consensus 344 ~~~--------------s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w 409 (578)
... .....+.++++|+|+|+|++|+++|.+.... .....++..+.+++++||+.+.+. +..
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~-~~~~~~~~~~~~~~~~gH~~~~~~----p~~ 284 (309)
T 3u1t_A 210 REVPIGGEPAFAEAEVLKNGEWLMASPIPKLLFHAEPGALAPKPVVDY-LSENVPNLEVRFVGAGTHFLQEDH----PHL 284 (309)
T ss_dssp HHSCBTTBSHHHHHHHHHHHHHHHHCCSCEEEEEEEECSSSCHHHHHH-HHHHSTTEEEEEEEEESSCHHHHC----HHH
T ss_pred HHhccccccchhhhhhhhhhhhcccCCCCEEEEecCCCCCCCHHHHHH-HHhhCCCCEEEEecCCcccchhhC----HHH
Confidence 111 1123467789999999999999999775533 445677888888899999998883 335
Q ss_pred HHHHHHHHHHhhcCC
Q 008093 410 WVRAVNEYLGVLHSS 424 (578)
Q Consensus 410 ~~~~v~eFL~~~~~~ 424 (578)
+.+.|.+||+.....
T Consensus 285 ~~~~i~~fl~~~~~~ 299 (309)
T 3u1t_A 285 IGQGIADWLRRNKPH 299 (309)
T ss_dssp HHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHhcchh
Confidence 899999999998654
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-22 Score=205.61 Aligned_cols=243 Identities=15% Similarity=0.067 Sum_probs=138.5
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCC--CCCCC-CCchHHHHHHHHHHHHHCCCCcE
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITS--DCFYN-AGWTEDAREVIGYLHHEYPKAPL 235 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~--~~~~~-~~~~~Dl~~~i~~l~~~~~~~~i 235 (578)
+.|+||++||+++ +...|...++..|.++||+|+++|+||||.|+... ...++ ..+.+|+.++++++ +..++
T Consensus 22 ~~~~vvllHG~~~-~~~~w~~~~~~~L~~~G~~vi~~D~rG~G~S~~~~~~~~~~~~~~~a~dl~~~l~~l----~~~~~ 96 (298)
T 1q0r_A 22 ADPALLLVMGGNL-SALGWPDEFARRLADGGLHVIRYDHRDTGRSTTRDFAAHPYGFGELAADAVAVLDGW----GVDRA 96 (298)
T ss_dssp TSCEEEEECCTTC-CGGGSCHHHHHHHHTTTCEEEEECCTTSTTSCCCCTTTSCCCHHHHHHHHHHHHHHT----TCSSE
T ss_pred CCCeEEEEcCCCC-CccchHHHHHHHHHhCCCEEEeeCCCCCCCCCCCCCCcCCcCHHHHHHHHHHHHHHh----CCCce
Confidence 3567999999965 44445234668899999999999999999997621 11222 23456777666665 34689
Q ss_pred EEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc-chhhh---------------hHHHhhHHHHHHHHHHH-HHhHHH
Q 008093 236 FAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW-DLLIG---------------DRFIGRRLIQKIYDRAL-TIGLQD 298 (578)
Q Consensus 236 ~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~-d~~~~---------------~~~l~~~~~~~~~~~~l-~~~l~~ 298 (578)
+++||||||.+++.+|.++|+ +|+++|+++++. ..... ...........+..... ......
T Consensus 97 ~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (298)
T 1q0r_A 97 HVVGLSMGATITQVIALDHHD--RLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQPFLDALALMNQPAEGRAA 174 (298)
T ss_dssp EEEEETHHHHHHHHHHHHCGG--GEEEEEEESCCCTTCCHHHHHHHHHHTCCCSSCSCCCCHHHHHHHHHHHSCCCSHHH
T ss_pred EEEEeCcHHHHHHHHHHhCch--hhheeEEecccCCCcccccchhhhhhhhhhhcccccccHHHHHHHhccCcccccHHH
Confidence 999999999999999999998 899999998754 21000 00000000001100000 000000
Q ss_pred HHhhhc---ccc-c-c-cCCHHHHhccCCHHHHHhhhhhccCCC--CCHHHHHHhCCcccc-cCCCccceEEEEeCCCCC
Q 008093 299 YAQLHE---PRY-S-R-LANWEGIKKSRSIRDFDSHATCLVGKF--ETVDTYYRNCSSSTY-VGNVSIPLLCISSLDDPV 369 (578)
Q Consensus 299 ~~~~~~---~~l-~-~-~~d~~~i~~~~s~~efd~~~~~~~~g~--~~~~~yy~~~s~~~~-l~~I~vPvLiI~g~dDpi 369 (578)
+..... ..+ . . ..+.+.+.. .....+.... ...++ .... .......... +.+|++|+|+|+|++|++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~ 250 (298)
T 1q0r_A 175 EVAKRVSKWRILSGTGVPFDDAEYAR-WEERAIDHAG--GVLAEPYAHYS-LTLPPPSRAAELREVTVPTLVIQAEHDPI 250 (298)
T ss_dssp HHHHHHHHHHHHHCSSSCCCHHHHHH-HHHHHHHHTT--TCCSCCCGGGG-CCCCCGGGGGGGGGCCSCEEEEEETTCSS
T ss_pred HHHHHHHhhhhccCCCCCCCHHHHHH-HHHHHhhccC--Cccchhhhhhh-hhcCcccccccccccCCCEEEEEeCCCcc
Confidence 000000 000 0 0 001110000 0000000000 00111 1000 0001112345 889999999999999999
Q ss_pred CCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 370 CTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 370 vp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
+|.+.... ..+..++.++++++++|| |. ++ .+.+.|.+||++.
T Consensus 251 ~~~~~~~~-~~~~~p~~~~~~i~~~gH----e~--p~--~~~~~i~~fl~~~ 293 (298)
T 1q0r_A 251 APAPHGKH-LAGLIPTARLAEIPGMGH----AL--PS--SVHGPLAEVILAH 293 (298)
T ss_dssp SCTTHHHH-HHHTSTTEEEEEETTCCS----SC--CG--GGHHHHHHHHHHH
T ss_pred CCHHHHHH-HHHhCCCCEEEEcCCCCC----CC--cH--HHHHHHHHHHHHH
Confidence 99875543 456778999999999999 31 33 4889999999865
|
| >2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.1e-21 Score=193.61 Aligned_cols=208 Identities=18% Similarity=0.182 Sum_probs=155.1
Q ss_pred CCCee--EEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCC---CCCccHHHHHHHHHHHhCCce
Q 008093 117 CFSYR--RQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLT---SDSAASYIRHLVFNTAKRGWN 191 (578)
Q Consensus 117 ~~~y~--r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~---G~s~~~yi~~l~~~l~~~Gy~ 191 (578)
..+|+ +..++.+|| ++...++.+. +..+|+||++||++ +.....++..++..++++||+
T Consensus 18 ~~~~e~~~~~~~~~~g-~l~~~~~~p~---------------~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~ 81 (249)
T 2i3d_A 18 YFQGHMPEVIFNGPAG-RLEGRYQPSK---------------EKSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFT 81 (249)
T ss_dssp ------CEEEEEETTE-EEEEEEECCS---------------STTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCE
T ss_pred cccCceeEEEEECCCc-eEEEEEEcCC---------------CCCCCEEEEECCCcccCCCccchHHHHHHHHHHHCCCE
Confidence 35577 888999988 8887776552 24678999999973 333333447889999999999
Q ss_pred EEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCC-CcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 192 VVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPK-APLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 192 Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~-~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
|+++|+||+|.|...... .....+|+.++++++...... .+++++||||||.+++.++..+++ ++++|+++++.
T Consensus 82 v~~~d~~g~G~s~~~~~~--~~~~~~d~~~~i~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~---v~~~v~~~~~~ 156 (249)
T 2i3d_A 82 TLRFNFRSIGRSQGEFDH--GAGELSDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRPE---IEGFMSIAPQP 156 (249)
T ss_dssp EEEECCTTSTTCCSCCCS--SHHHHHHHHHHHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHHCTT---EEEEEEESCCT
T ss_pred EEEECCCCCCCCCCCCCC--ccchHHHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcCCC---ccEEEEEcCch
Confidence 999999999998754322 223348999999999988654 389999999999999999999876 99999998876
Q ss_pred chhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCccc
Q 008093 271 DLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSST 350 (578)
Q Consensus 271 d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~ 350 (578)
+... ..
T Consensus 157 ~~~~--------------------------------------------------------------------------~~ 162 (249)
T 2i3d_A 157 NTYD--------------------------------------------------------------------------FS 162 (249)
T ss_dssp TTSC--------------------------------------------------------------------------CT
T ss_pred hhhh--------------------------------------------------------------------------hh
Confidence 4200 12
Q ss_pred ccCCCccceEEEEeCCCCCCCCCCcchHHHhcC----CCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcCC
Q 008093 351 YVGNVSIPLLCISSLDDPVCTVEAIPWDECRAN----KNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSS 424 (578)
Q Consensus 351 ~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~----~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~~ 424 (578)
.+.++++|+|+++|++|+++|.+.......... .++++.+++++||..+ + ....+.+.+.+||++....
T Consensus 163 ~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~-~----~~~~~~~~i~~fl~~~l~~ 235 (249)
T 2i3d_A 163 FLAPCPSSGLIINGDADKVAPEKDVNGLVEKLKTQKGILITHRTLPGANHFFN-G----KVDELMGECEDYLDRRLNG 235 (249)
T ss_dssp TCTTCCSCEEEEEETTCSSSCHHHHHHHHHHHTTSTTCCEEEEEETTCCTTCT-T----CHHHHHHHHHHHHHHHHTT
T ss_pred hhcccCCCEEEEEcCCCCCCCHHHHHHHHHHHhhccCCceeEEEECCCCcccc-c----CHHHHHHHHHHHHHHhcCC
Confidence 355788999999999999999875443222222 2889999999999876 4 2235889999999987654
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.89 E-value=6.7e-22 Score=202.86 Aligned_cols=247 Identities=14% Similarity=0.121 Sum_probs=146.0
Q ss_pred eEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCC
Q 008093 121 RRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGL 200 (578)
Q Consensus 121 ~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~ 200 (578)
+...+++.||..+.+....+.. .....+|+||++||+++ +...| ..+++.|+++||+|+++|+|||
T Consensus 8 ~~~~i~~~dG~~l~~~~~~p~~------------~~~~~~~~VvllHG~g~-~~~~~-~~~~~~L~~~G~~Vi~~D~rGh 73 (305)
T 1tht_A 8 IAHVLRVNNGQELHVWETPPKE------------NVPFKNNTILIASGFAR-RMDHF-AGLAEYLSTNGFHVFRYDSLHH 73 (305)
T ss_dssp EEEEEEETTTEEEEEEEECCCT------------TSCCCSCEEEEECTTCG-GGGGG-HHHHHHHHTTTCCEEEECCCBC
T ss_pred eEEEEEcCCCCEEEEEEecCcc------------cCCCCCCEEEEecCCcc-CchHH-HHHHHHHHHCCCEEEEeeCCCC
Confidence 5677888999888865544321 01135688999999954 44456 7899999999999999999999
Q ss_pred -CCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHH
Q 008093 201 -GGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFI 279 (578)
Q Consensus 201 -G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l 279 (578)
|.|+.....+....+.+|+.+++++++ ..+..+++++||||||.+++.+|.+ + +++++|++++..+....
T Consensus 74 ~G~S~~~~~~~~~~~~~~D~~~~~~~l~-~~~~~~~~lvGhSmGG~iA~~~A~~-~---~v~~lvl~~~~~~~~~~---- 144 (305)
T 1tht_A 74 VGLSSGSIDEFTMTTGKNSLCTVYHWLQ-TKGTQNIGLIAASLSARVAYEVISD-L---ELSFLITAVGVVNLRDT---- 144 (305)
T ss_dssp C--------CCCHHHHHHHHHHHHHHHH-HTTCCCEEEEEETHHHHHHHHHTTT-S---CCSEEEEESCCSCHHHH----
T ss_pred CCCCCCcccceehHHHHHHHHHHHHHHH-hCCCCceEEEEECHHHHHHHHHhCc-c---CcCEEEEecCchhHHHH----
Confidence 988754322211345689999999997 4566799999999999999999888 4 58999998765432110
Q ss_pred hhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccce
Q 008093 280 GRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPL 359 (578)
Q Consensus 280 ~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPv 359 (578)
....+.. .+.......+....... ........+..... ...+..... ....+.+|++|+
T Consensus 145 --------~~~~~~~---~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~~~~~------~~~~l~~i~~Pv 203 (305)
T 1tht_A 145 --------LEKALGF---DYLSLPIDELPNDLDFE--GHKLGSEVFVRDCF--EHHWDTLDS------TLDKVANTSVPL 203 (305)
T ss_dssp --------HHHHHSS---CGGGSCGGGCCSEEEET--TEEEEHHHHHHHHH--HTTCSSHHH------HHHHHTTCCSCE
T ss_pred --------HHHHhhh---hhhhcchhhCccccccc--ccccCHHHHHHHHH--hccccchhh------HHHHHhhcCCCE
Confidence 0000000 00000000000000000 00000011110000 001111111 124578899999
Q ss_pred EEEEeCCCCCCCCCCcchHHHh--cCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 360 LCISSLDDPVCTVEAIPWDECR--ANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 360 LiI~g~dDpivp~~~~~~~~~~--~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
|+|+|++|+++|.+.... ..+ ..+++++.+++++||..+ |. | +.+.+|++.+
T Consensus 204 Lii~G~~D~~vp~~~~~~-l~~~i~~~~~~l~~i~~agH~~~-e~--p------~~~~~fl~~~ 257 (305)
T 1tht_A 204 IAFTANNDDWVKQEEVYD-MLAHIRTGHCKLYSLLGSSHDLG-EN--L------VVLRNFYQSV 257 (305)
T ss_dssp EEEEETTCTTSCHHHHHH-HHTTCTTCCEEEEEETTCCSCTT-SS--H------HHHHHHHHHH
T ss_pred EEEEeCCCCccCHHHHHH-HHHhcCCCCcEEEEeCCCCCchh-hC--c------hHHHHHHHHH
Confidence 999999999999875443 233 236899999999999875 52 2 2455666554
|
| >2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.7e-21 Score=187.44 Aligned_cols=207 Identities=15% Similarity=0.050 Sum_probs=157.4
Q ss_pred CCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCC---CCCCccHHHHHHHHHHHhCCceEEE
Q 008093 118 FSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGL---TSDSAASYIRHLVFNTAKRGWNVVV 194 (578)
Q Consensus 118 ~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl---~G~s~~~yi~~l~~~l~~~Gy~Vvv 194 (578)
...++..++..|| .+...++.|.+. ....+|+||++||+ ++.....++..++..++++||+|++
T Consensus 8 ~~~~~~~~~~~~g-~~~~~~~~p~~~------------~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~ 74 (220)
T 2fuk_A 8 TESAALTLDGPVG-PLDVAVDLPEPD------------VAVQPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVR 74 (220)
T ss_dssp SSCEEEEEEETTE-EEEEEEECCCTT------------SCCCSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEE
T ss_pred ccceEEEEeCCCC-eEEEEEEeCCCC------------CccccCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEE
Confidence 3457778888888 787777766330 01357999999995 2434444558899999999999999
Q ss_pred EeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhh
Q 008093 195 SNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLI 274 (578)
Q Consensus 195 ~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~ 274 (578)
+|+||+|.|.... .......+|+.++++++..+++..+++++||||||.+++.++..+ +++++|+++++.+...
T Consensus 75 ~d~~g~g~s~~~~--~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~----~v~~~v~~~~~~~~~~ 148 (220)
T 2fuk_A 75 FNFRSVGTSAGSF--DHGDGEQDDLRAVAEWVRAQRPTDTLWLAGFSFGAYVSLRAAAAL----EPQVLISIAPPAGRWD 148 (220)
T ss_dssp ECCTTSTTCCSCC--CTTTHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHH----CCSEEEEESCCBTTBC
T ss_pred EecCCCCCCCCCc--ccCchhHHHHHHHHHHHHhcCCCCcEEEEEECHHHHHHHHHHhhc----cccEEEEecccccchh
Confidence 9999999987543 122346789999999999998778999999999999999999887 5999999988764421
Q ss_pred hhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCC
Q 008093 275 GDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGN 354 (578)
Q Consensus 275 ~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~ 354 (578)
+ ..+.
T Consensus 149 -------------------------------------------------------------~-------------~~~~- 153 (220)
T 2fuk_A 149 -------------------------------------------------------------F-------------SDVQ- 153 (220)
T ss_dssp -------------------------------------------------------------C-------------TTCC-
T ss_pred -------------------------------------------------------------h-------------hhcc-
Confidence 0 0011
Q ss_pred CccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcC
Q 008093 355 VSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHS 423 (578)
Q Consensus 355 I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~ 423 (578)
..+|+|+++|++|+++|.+..........+++++.+++++||..+.+ ++ .+.+.+.+|+++..+
T Consensus 154 ~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~---~~--~~~~~i~~~l~~~l~ 217 (220)
T 2fuk_A 154 PPAQWLVIQGDADEIVDPQAVYDWLETLEQQPTLVRMPDTSHFFHRK---LI--DLRGALQHGVRRWLP 217 (220)
T ss_dssp CCSSEEEEEETTCSSSCHHHHHHHHTTCSSCCEEEEETTCCTTCTTC---HH--HHHHHHHHHHGGGCS
T ss_pred cCCcEEEEECCCCcccCHHHHHHHHHHhCcCCcEEEeCCCCceehhh---HH--HHHHHHHHHHHHHhh
Confidence 15799999999999999875544333333789999999999987664 22 478899999988754
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A | Back alignment and structure |
|---|
Probab=99.89 E-value=4.9e-23 Score=205.85 Aligned_cols=265 Identities=11% Similarity=0.064 Sum_probs=153.5
Q ss_pred CCCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEe
Q 008093 117 CFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSN 196 (578)
Q Consensus 117 ~~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D 196 (578)
..+++.+.++. ||.++.+....+ +++|+||++||+++ +...| ..++..|. +||+|+++|
T Consensus 7 ~~~~~~~~~~~-~g~~l~~~~~g~-----------------~~~~~vl~lHG~~~-~~~~~-~~~~~~l~-~~~~v~~~d 65 (299)
T 3g9x_A 7 GFPFDPHYVEV-LGERMHYVDVGP-----------------RDGTPVLFLHGNPT-SSYLW-RNIIPHVA-PSHRCIAPD 65 (299)
T ss_dssp CCCCCCEEEEE-TTEEEEEEEESC-----------------SSSCCEEEECCTTC-CGGGG-TTTHHHHT-TTSCEEEEC
T ss_pred Ccccceeeeee-CCeEEEEEecCC-----------------CCCCEEEEECCCCc-cHHHH-HHHHHHHc-cCCEEEeeC
Confidence 34556666666 777777654321 34577999999965 44445 57777775 599999999
Q ss_pred CCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhh
Q 008093 197 HRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGD 276 (578)
Q Consensus 197 ~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~ 276 (578)
+||||.|+..........+.+|+.++++++ +..+++++||||||.+++.+|.++|+ +|+++|+++++.......
T Consensus 66 ~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~lvG~S~Gg~~a~~~a~~~p~--~v~~lvl~~~~~~~~~~~ 139 (299)
T 3g9x_A 66 LIGMGKSDKPDLDYFFDDHVRYLDAFIEAL----GLEEVVLVIHDWGSALGFHWAKRNPE--RVKGIACMEFIRPFPTWD 139 (299)
T ss_dssp CTTSTTSCCCCCCCCHHHHHHHHHHHHHHT----TCCSEEEEEEHHHHHHHHHHHHHSGG--GEEEEEEEEECCCBSSGG
T ss_pred CCCCCCCCCCCCcccHHHHHHHHHHHHHHh----CCCcEEEEEeCccHHHHHHHHHhcch--heeEEEEecCCcchhhhh
Confidence 999999976644222223345555555543 45689999999999999999999988 899999998443222110
Q ss_pred HHHhhHHHHHHHHHHHHHhHHH--------HHhhhcc-cccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhC-
Q 008093 277 RFIGRRLIQKIYDRALTIGLQD--------YAQLHEP-RYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNC- 346 (578)
Q Consensus 277 ~~l~~~~~~~~~~~~l~~~l~~--------~~~~~~~-~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~- 346 (578)
.. ... ....+.......+.. +.....+ .......... ...+...+..+ ........++...
T Consensus 140 ~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~ 210 (299)
T 3g9x_A 140 EW-PEF-ARETFQAFRTADVGRELIIDQNAFIEGALPKCVVRPLTEVE------MDHYREPFLKP-VDREPLWRFPNELP 210 (299)
T ss_dssp GS-CGG-GHHHHHHHTSSSHHHHHHTTSCHHHHTHHHHTCSSCCCHHH------HHHHHGGGSSG-GGGHHHHHHHHHSC
T ss_pred hc-chH-HHHHHHHHcCCCcchhhhccchhhHHHhhhhhhccCCCHHH------HHHHHHHhccc-cccchhhhhhhhhh
Confidence 00 000 000111000000000 0000000 0000000000 00000000000 0000111111111
Q ss_pred -------------CcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHH
Q 008093 347 -------------SSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRA 413 (578)
Q Consensus 347 -------------s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~ 413 (578)
.....+.+|++|+|+|+|++|+++|.+.... .....+++++.+++++||+.++|. | ..+.+.
T Consensus 211 ~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~-~~~~~~~~~~~~~~~~gH~~~~e~--p--~~~~~~ 285 (299)
T 3g9x_A 211 IAGEPANIVALVEAYMNWLHQSPVPKLLFWGTPGVLIPPAEAAR-LAESLPNCKTVDIGPGLHYLQEDN--P--DLIGSE 285 (299)
T ss_dssp BTTBSHHHHHHHHHHHHHHHHCCSCEEEEEEEECSSSCHHHHHH-HHHHSTTEEEEEEEEESSCHHHHC--H--HHHHHH
T ss_pred hccccchhhhhhhhhhhhcccCCCCeEEEecCCCCCCCHHHHHH-HHhhCCCCeEEEeCCCCCcchhcC--H--HHHHHH
Confidence 1123467889999999999999999875543 455678899999999999999983 3 357788
Q ss_pred HHHHHHhhc
Q 008093 414 VNEYLGVLH 422 (578)
Q Consensus 414 v~eFL~~~~ 422 (578)
|.+|+....
T Consensus 286 i~~~~~~~~ 294 (299)
T 3g9x_A 286 IARWLPALH 294 (299)
T ss_dssp HHHHSGGGC
T ss_pred HHHHHhhhh
Confidence 888877654
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.8e-22 Score=202.13 Aligned_cols=261 Identities=12% Similarity=0.068 Sum_probs=145.1
Q ss_pred CeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCC
Q 008093 119 SYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHR 198 (578)
Q Consensus 119 ~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~R 198 (578)
.++...+.. ||.++.+.... ++|+||++||++++ ...| ..++..|.+ ||+|+++|+|
T Consensus 12 ~~~~~~~~~-~g~~l~~~~~g-------------------~~~~vv~lHG~~~~-~~~~-~~~~~~l~~-~~~v~~~D~~ 68 (306)
T 3r40_A 12 GFGSEWINT-SSGRIFARVGG-------------------DGPPLLLLHGFPQT-HVMW-HRVAPKLAE-RFKVIVADLP 68 (306)
T ss_dssp TCEEEEECC-TTCCEEEEEEE-------------------CSSEEEEECCTTCC-GGGG-GGTHHHHHT-TSEEEEECCT
T ss_pred CCceEEEEe-CCEEEEEEEcC-------------------CCCeEEEECCCCCC-HHHH-HHHHHHhcc-CCeEEEeCCC
Confidence 345555544 78777765321 34789999999654 4445 678888887 9999999999
Q ss_pred CCCCCCCCCCC----CCC-CCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchh
Q 008093 199 GLGGVSITSDC----FYN-AGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL 273 (578)
Q Consensus 199 G~G~S~~~~~~----~~~-~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~ 273 (578)
|||.|+..... .+. ..+.+|+.+++++ .+..+++++||||||.+++.+|.++|+ +|+++|+++++....
T Consensus 69 G~G~S~~~~~~~~~~~~~~~~~~~~~~~~l~~----l~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~ 142 (306)
T 3r40_A 69 GYGWSDMPESDEQHTPYTKRAMAKQLIEAMEQ----LGHVHFALAGHNRGARVSYRLALDSPG--RLSKLAVLDILPTYE 142 (306)
T ss_dssp TSTTSCCCCCCTTCGGGSHHHHHHHHHHHHHH----TTCSSEEEEEETHHHHHHHHHHHHCGG--GEEEEEEESCCCHHH
T ss_pred CCCCCCCCCCCcccCCCCHHHHHHHHHHHHHH----hCCCCEEEEEecchHHHHHHHHHhChh--hccEEEEecCCCCcc
Confidence 99999766442 122 2223444444443 455689999999999999999999998 899999999754322
Q ss_pred hhhHHHhhHHHHHHHHH------------HHH----HhHHHHHhhhcccc-cccCCHHHHhccCCHHHHHhhhhhccCCC
Q 008093 274 IGDRFIGRRLIQKIYDR------------ALT----IGLQDYAQLHEPRY-SRLANWEGIKKSRSIRDFDSHATCLVGKF 336 (578)
Q Consensus 274 ~~~~~l~~~~~~~~~~~------------~l~----~~l~~~~~~~~~~l-~~~~d~~~i~~~~s~~efd~~~~~~~~g~ 336 (578)
...... .......+.. .+. ..+..........- ....+.+. ...+...+..+ ...
T Consensus 143 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~-~~~ 214 (306)
T 3r40_A 143 YWQRMN-RAYALKIYHWSFLAQPAPLPENLLGGDPDFYVKAKLASWTRAGDLSAFDPRA------VEHYRIAFADP-MRR 214 (306)
T ss_dssp HHHHCS-HHHHHHSTHHHHHTSCTTHHHHHHTSCHHHHHHHHHHHTSSSSSSTTSCHHH------HHHHHHHHTSH-HHH
T ss_pred chhhhh-hhhhhhhHHHHHhhcccchHHHHHcCCHHHHHHHHhhcccCCCccccCCHHH------HHHHHHHHccC-CCc
Confidence 111000 0000000000 000 00001110000000 00000000 00010000000 000
Q ss_pred CCHHHHHHhCC---------cccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCc
Q 008093 337 ETVDTYYRNCS---------SSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAG 407 (578)
Q Consensus 337 ~~~~~yy~~~s---------~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~ 407 (578)
.....+++... ....+.++++|+|+|+|++|++++............++..+.++ +|||+.+.|. +
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~-~~gH~~~~e~----p 289 (306)
T 3r40_A 215 HVMCEDYRAGAYADFEHDKIDVEAGNKIPVPMLALWGASGIAQSAATPLDVWRKWASDVQGAPI-ESGHFLPEEA----P 289 (306)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHTCCBCSCEEEEEETTCC------CHHHHHHHBSSEEEEEE-SSCSCHHHHS----H
T ss_pred chhhHHHHhcccccchhhhhhhhhccCCCcceEEEEecCCcccCchhHHHHHHhhcCCCeEEEe-cCCcCchhhC----h
Confidence 01111111100 01246899999999999999999954433445566788888888 7899999883 3
Q ss_pred ccHHHHHHHHHHhh
Q 008093 408 MWWVRAVNEYLGVL 421 (578)
Q Consensus 408 ~w~~~~v~eFL~~~ 421 (578)
..+.+.|.+||++.
T Consensus 290 ~~~~~~i~~fl~~~ 303 (306)
T 3r40_A 290 DQTAEALVRFFSAA 303 (306)
T ss_dssp HHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHhc
Confidence 46899999999864
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.88 E-value=3.6e-23 Score=206.23 Aligned_cols=239 Identities=14% Similarity=0.117 Sum_probs=141.1
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCC-CCchHHHHHHHHHHHHHCCCCcEEEE
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN-AGWTEDAREVIGYLHHEYPKAPLFAI 238 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~-~~~~~Dl~~~i~~l~~~~~~~~i~lv 238 (578)
.++||++||+++++ ..| ..++..|.+ +|+|+++|+||||.|+......++ ..+.+|+.++++++ +..+++++
T Consensus 16 g~~vvllHG~~~~~-~~~-~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~dl~~~l~~l----~~~~~~lv 88 (269)
T 2xmz_A 16 NQVLVFLHGFLSDS-RTY-HNHIEKFTD-NYHVITIDLPGHGEDQSSMDETWNFDYITTLLDRILDKY----KDKSITLF 88 (269)
T ss_dssp SEEEEEECCTTCCG-GGG-TTTHHHHHT-TSEEEEECCTTSTTCCCCTTSCCCHHHHHHHHHHHHGGG----TTSEEEEE
T ss_pred CCeEEEEcCCCCcH-HHH-HHHHHHHhh-cCeEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHc----CCCcEEEE
Confidence 34699999996644 445 677888876 499999999999999765331222 23345666655544 45689999
Q ss_pred EEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHH-HHHHHHHHHHhHHHHHhhhc--cccccc--CCH
Q 008093 239 GTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLI-QKIYDRALTIGLQDYAQLHE--PRYSRL--ANW 313 (578)
Q Consensus 239 GhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~-~~~~~~~l~~~l~~~~~~~~--~~l~~~--~d~ 313 (578)
||||||.+++.+|.++|+ +|+++|+++++...........+... ...........+........ +.+... .+.
T Consensus 89 GhS~Gg~va~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (269)
T 2xmz_A 89 GYSMGGRVALYYAINGHI--PISNLILESTSPGIKEEANQLERRLVDDARAKVLDIAGIELFVNDWEKLPLFQSQLELPV 166 (269)
T ss_dssp EETHHHHHHHHHHHHCSS--CCSEEEEESCCSCCSSHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTSGGGGGGGGSCH
T ss_pred EECchHHHHHHHHHhCch--heeeeEEEcCCcccCCchhHHHHhhhhhHHHHhhccccHHHHHHHHHhCccccccccCCH
Confidence 999999999999999998 89999999975433211111100000 00000000011111111100 001000 000
Q ss_pred HHHhccCCHHHHHhhhhhccCCCCCHHHHHH------hCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEE
Q 008093 314 EGIKKSRSIRDFDSHATCLVGKFETVDTYYR------NCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVV 387 (578)
Q Consensus 314 ~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~------~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~ 387 (578)
+.. ..+..... ..........+. .......+.+|++|+|+|+|++|++++.+... ..+..++.+
T Consensus 167 ~~~------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~--~~~~~~~~~ 236 (269)
T 2xmz_A 167 EIQ------HQIRQQRL--SQSPHKMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKFVQIAKK--MANLIPNSK 236 (269)
T ss_dssp HHH------HHHHHHHH--TSCHHHHHHHHHHHSTTTSCCCGGGGGGCCSCEEEEEETTCHHHHHHHHH--HHHHSTTEE
T ss_pred HHH------HHHHHHHh--ccCcHHHHHHHHHHHhccCccHHHHHHhcCCCEEEEEeCCCcccCHHHHH--HHhhCCCcE
Confidence 000 00000000 000000001111 11223467889999999999999998876432 456678999
Q ss_pred EEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 388 LATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 388 l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
+.+++++||+.++|. | ..+.+.|.+||++.
T Consensus 237 ~~~i~~~gH~~~~e~--p--~~~~~~i~~fl~~~ 266 (269)
T 2xmz_A 237 CKLISATGHTIHVED--S--DEFDTMILGFLKEE 266 (269)
T ss_dssp EEEETTCCSCHHHHS--H--HHHHHHHHHHHHHH
T ss_pred EEEeCCCCCChhhcC--H--HHHHHHHHHHHHHh
Confidence 999999999999983 3 36899999999864
|
| >3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.88 E-value=3.2e-22 Score=207.31 Aligned_cols=284 Identities=15% Similarity=0.073 Sum_probs=153.4
Q ss_pred CeeEEEEEecCCcEEEEEEec--CCCCCCCccccccccCCCCCCcEEEEECCCCCCCcc------------HHHHHHH--
Q 008093 119 SYRRQLFRLSDGGMIALDWLM--GSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAA------------SYIRHLV-- 182 (578)
Q Consensus 119 ~y~r~~l~~~DG~~i~ldw~~--~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~------------~yi~~l~-- 182 (578)
.++...++++||.++.+.... ... .....+|+||++||+++++.. +| +.++
T Consensus 11 ~~~~~~~~~~~g~~l~~~i~y~~~g~------------~~~~~~p~vll~HG~~~~~~~~~~~~~~~~~~~~w-~~~~~~ 77 (377)
T 3i1i_A 11 KFILKEYTFENGRTIPVQMGYETYGT------------LNRERSNVILICHYFSATSHAAGKYTAHDEESGWW-DGLIGP 77 (377)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEEESC------------CCTTCCCEEEEECCTTCCSCCSSCSSTTCSSCCTT-TTTEET
T ss_pred eEeecceeecCCCEeeeeEEEEeecc------------cCCCCCCEEEEeccccCcchhccccccccccccch-hhhcCC
Confidence 356778999999887222211 111 112346899999999776544 23 4455
Q ss_pred -HHHHhCCceEEEEeCCCCCCCCC-------CCC------CCC----CCCchHHHHHHHHHHHHHCCCCcEE-EEEEchH
Q 008093 183 -FNTAKRGWNVVVSNHRGLGGVSI-------TSD------CFY----NAGWTEDAREVIGYLHHEYPKAPLF-AIGTSIG 243 (578)
Q Consensus 183 -~~l~~~Gy~Vvv~D~RG~G~S~~-------~~~------~~~----~~~~~~Dl~~~i~~l~~~~~~~~i~-lvGhSmG 243 (578)
..+...||+|+++|+||||.|.+ ... ..+ .....+|+.+.+..+.+..+..+++ ++|||||
T Consensus 78 ~~~l~~~~~~vi~~D~~G~G~S~G~~~g~~g~~~~~p~~~~~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~ilvGhS~G 157 (377)
T 3i1i_A 78 GKAIDTNQYFVICTDNLCNVQVKNPHVITTGPKSINPKTGDEYAMDFPVFTFLDVARMQCELIKDMGIARLHAVMGPSAG 157 (377)
T ss_dssp TSSEETTTCEEEEECCTTCSCTTSTTCCCCSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCCCBSEEEEETHH
T ss_pred CCccccccEEEEEecccccccccCCCcccCCCCCCCCCCCCcccCCCCCCCHHHHHHHHHHHHHHcCCCcEeeEEeeCHh
Confidence 56667899999999999976441 110 000 0112245555555555555666775 9999999
Q ss_pred HHHHHHHHhhcCCCCCccEEEE-EcCCcchhhhhHHHhhHHHHHHHH-----------------HHHHHhHHHHH----h
Q 008093 244 ANILVKYLGEEGEKTPVAGAAA-ICSPWDLLIGDRFIGRRLIQKIYD-----------------RALTIGLQDYA----Q 301 (578)
Q Consensus 244 G~ial~ya~~~p~~~~V~~~Vl-is~p~d~~~~~~~l~~~~~~~~~~-----------------~~l~~~l~~~~----~ 301 (578)
|.+++.+|.++|+ +|+++|+ ++++.................+.. ......+.... .
T Consensus 158 g~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 235 (377)
T 3i1i_A 158 GMIAQQWAVHYPH--MVERMIGVITNPQNPIITSVNVAQNAIEAIRLDPSWKGGKYGEEQPMKGLQLANRMMFMNAFDEH 235 (377)
T ss_dssp HHHHHHHHHHCTT--TBSEEEEESCCSBCCHHHHHHTTHHHHHHHHHSGGGGGGCCTTSCCHHHHHHHHHHHHTTSSCHH
T ss_pred HHHHHHHHHHChH--HHHHhcccCcCCCcCCchhhHHHHHHHHHHhcCCCccCCccccCCccchHHHHHHHHhhhcCCHH
Confidence 9999999999999 8999999 666554221111000000000000 00000000000 0
Q ss_pred hhcccccccCCHHH----HhccCCHHHHHhhhhhccCCCCCHHHHHH------hC-------CcccccCCCccceEEEEe
Q 008093 302 LHEPRYSRLANWEG----IKKSRSIRDFDSHATCLVGKFETVDTYYR------NC-------SSSTYVGNVSIPLLCISS 364 (578)
Q Consensus 302 ~~~~~l~~~~d~~~----i~~~~s~~efd~~~~~~~~g~~~~~~yy~------~~-------s~~~~l~~I~vPvLiI~g 364 (578)
.....+........ +.....+..+................|.. .. .....+.+|++|+|+|+|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G 315 (377)
T 3i1i_A 236 FYETTYPRNSIEVEPYEKVSSLTSFEKEINKLTYRSIELVDANSWMYTAKAVLLHDIAHGFSSLEEALSNVEANVLMIPC 315 (377)
T ss_dssp HHHHHSCCCSSCCGGGTCTTCCCHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHHCBTTTTSSCHHHHHHTCCSEEEEECB
T ss_pred HHHHHhhhhhccccccccccchhHHHHHHHHHHhhhhcccCHHHHHHHHHHHhhcccccccCCHHHHHhhCCCCEEEEec
Confidence 00000000000000 00000011111111111111111111111 11 113456789999999999
Q ss_pred CCCCCCCCCCcchHHHhcC----CCEEEEEeCC-CCccccccccccCcccHHHHHHHHHHhhc
Q 008093 365 LDDPVCTVEAIPWDECRAN----KNVVLATTWH-GGHLAFFEGLTAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 365 ~dDpivp~~~~~~~~~~~~----~~~~l~~~~~-GGH~~~~eg~~~~~~w~~~~v~eFL~~~~ 422 (578)
++|+++|.+.... ..+.. +++++.++++ +||+.++|. + ..+.+.|.+||++..
T Consensus 316 ~~D~~~~~~~~~~-~~~~~~~~g~~~~~~~i~~~~gH~~~~e~--p--~~~~~~i~~fl~~~~ 373 (377)
T 3i1i_A 316 KQDLLQPSRYNYK-MVDLLQKQGKYAEVYEIESINGHMAGVFD--I--HLFEKKVYEFLNRKV 373 (377)
T ss_dssp TTCSSSCTHHHHH-HHHHHHHTTCCEEECCBCCTTGGGHHHHC--G--GGTHHHHHHHHHSCC
T ss_pred CCccccCHHHHHH-HHHHHHhcCCCceEEEcCCCCCCcchhcC--H--HHHHHHHHHHHHhhh
Confidence 9999999875543 22333 8999999998 999999983 3 368999999998754
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A | Back alignment and structure |
|---|
Probab=99.88 E-value=3.7e-22 Score=193.91 Aligned_cols=226 Identities=12% Similarity=0.030 Sum_probs=147.6
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCC--CCCCchHHHHHHHHHHHHHCCCCcE
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCF--YNAGWTEDAREVIGYLHHEYPKAPL 235 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~--~~~~~~~Dl~~~i~~l~~~~~~~~i 235 (578)
...|+||++||++++ ...| ..++..|.++||+|+++|+||||.|+...... ....+.+|+.++++++..+ ..++
T Consensus 20 ~~~~~vv~~HG~~~~-~~~~-~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~d~~~~i~~l~~~--~~~~ 95 (251)
T 3dkr_A 20 GTDTGVVLLHAYTGS-PNDM-NFMARALQRSGYGVYVPLFSGHGTVEPLDILTKGNPDIWWAESSAAVAHMTAK--YAKV 95 (251)
T ss_dssp CSSEEEEEECCTTCC-GGGG-HHHHHHHHHTTCEEEECCCTTCSSSCTHHHHHHCCHHHHHHHHHHHHHHHHTT--CSEE
T ss_pred CCCceEEEeCCCCCC-HHHH-HHHHHHHHHCCCEEEecCCCCCCCCChhhhcCcccHHHHHHHHHHHHHHHHHh--cCCe
Confidence 356889999999654 4455 78999999999999999999999985432111 1134568999999999876 5689
Q ss_pred EEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHH
Q 008093 236 FAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEG 315 (578)
Q Consensus 236 ~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~ 315 (578)
+++||||||.+++.++.++|+ .+++++++++.............. +...+....... +
T Consensus 96 ~l~G~S~Gg~~a~~~a~~~p~--~~~~~i~~~p~~~~~~~~~~~~~~---------~~~~~~~~~~~~-~---------- 153 (251)
T 3dkr_A 96 FVFGLSLGGIFAMKALETLPG--ITAGGVFSSPILPGKHHLVPGFLK---------YAEYMNRLAGKS-D---------- 153 (251)
T ss_dssp EEEESHHHHHHHHHHHHHCSS--CCEEEESSCCCCTTCBCHHHHHHH---------HHHHHHHHHTCC-C----------
T ss_pred EEEEechHHHHHHHHHHhCcc--ceeeEEEecchhhccchhhHHHHH---------HHHHHHhhcccC-c----------
Confidence 999999999999999999988 788888887766533211100010 111111110000 0
Q ss_pred HhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhc-C-CCEEEEEeCC
Q 008093 316 IKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRA-N-KNVVLATTWH 393 (578)
Q Consensus 316 i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~-~-~~~~l~~~~~ 393 (578)
....+........ .....+.. .....+.++++|+|+++|++|+++|.+......... . .++++.++++
T Consensus 154 -----~~~~~~~~~~~~~---~~~~~~~~--~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (251)
T 3dkr_A 154 -----ESTQILAYLPGQL---AAIDQFAT--TVAADLNLVKQPTFIGQAGQDELVDGRLAYQLRDALINAARVDFHWYDD 223 (251)
T ss_dssp -----CHHHHHHHHHHHH---HHHHHHHH--HHHHTGGGCCSCEEEEEETTCSSBCTTHHHHHHHHCTTCSCEEEEEETT
T ss_pred -----chhhHHhhhHHHH---HHHHHHHH--HHhccccccCCCEEEEecCCCcccChHHHHHHHHHhcCCCCceEEEeCC
Confidence 0011111100000 00001110 023456778999999999999999987655433332 2 4679999999
Q ss_pred CCccccccccccCcccHHHHHHHHHHhhc
Q 008093 394 GGHLAFFEGLTAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 394 GGH~~~~eg~~~~~~w~~~~v~eFL~~~~ 422 (578)
+||..+.+ .+...+.+.+.+||+++.
T Consensus 224 ~gH~~~~~---~~~~~~~~~i~~fl~~~~ 249 (251)
T 3dkr_A 224 AKHVITVN---SAHHALEEDVIAFMQQEN 249 (251)
T ss_dssp CCSCTTTS---TTHHHHHHHHHHHHHTTC
T ss_pred CCcccccc---cchhHHHHHHHHHHHhhc
Confidence 99999887 234468899999998753
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A | Back alignment and structure |
|---|
Probab=99.88 E-value=5.1e-23 Score=205.97 Aligned_cols=244 Identities=19% Similarity=0.201 Sum_probs=145.2
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEE
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAI 238 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lv 238 (578)
++|+||++||++++ ...|...++..+.+.||+|+++|+||||.|+.... .....+.+|+.++++++ +..+++++
T Consensus 42 ~~~~vv~lHG~~~~-~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~-~~~~~~~~~~~~~l~~l----~~~~~~lv 115 (293)
T 3hss_A 42 TGDPVVFIAGRGGA-GRTWHPHQVPAFLAAGYRCITFDNRGIGATENAEG-FTTQTMVADTAALIETL----DIAPARVV 115 (293)
T ss_dssp SSEEEEEECCTTCC-GGGGTTTTHHHHHHTTEEEEEECCTTSGGGTTCCS-CCHHHHHHHHHHHHHHH----TCCSEEEE
T ss_pred CCCEEEEECCCCCc-hhhcchhhhhhHhhcCCeEEEEccCCCCCCCCccc-CCHHHHHHHHHHHHHhc----CCCcEEEE
Confidence 45789999999654 44452257788888999999999999998865422 21233446666666665 44689999
Q ss_pred EEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHH--HHhHHHHHhhhcccccccCCHHHH
Q 008093 239 GTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRAL--TIGLQDYAQLHEPRYSRLANWEGI 316 (578)
Q Consensus 239 GhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l--~~~l~~~~~~~~~~l~~~~d~~~i 316 (578)
||||||.+++.+|.++|+ +++++|+++++.............. ........ ............. ......
T Consensus 116 GhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 187 (293)
T 3hss_A 116 GVSMGAFIAQELMVVAPE--LVSSAVLMATRGRLDRARQFFNKAE-AELYDSGVQLPPTYDARARLLEN-----FSRKTL 187 (293)
T ss_dssp EETHHHHHHHHHHHHCGG--GEEEEEEESCCSSCCHHHHHHHHHH-HHHHHHTCCCCHHHHHHHHHHHH-----SCHHHH
T ss_pred eeCccHHHHHHHHHHChH--HHHhhheecccccCChhhhHHHHHH-HHHHhhcccchhhHHHHHHHhhh-----cccccc
Confidence 999999999999999988 8999999998765543222211110 00000000 0000000000000 000000
Q ss_pred hccCCHHHHHhhhhhccC-CCCCHHHHH---HhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeC
Q 008093 317 KKSRSIRDFDSHATCLVG-KFETVDTYY---RNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTW 392 (578)
Q Consensus 317 ~~~~s~~efd~~~~~~~~-g~~~~~~yy---~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~ 392 (578)
........+......... ........+ ........+.++++|+|+|+|++|+++|.+.... .....++.++.+++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~-~~~~~~~~~~~~~~ 266 (293)
T 3hss_A 188 NDDVAVGDWIAMFSMWPIKSTPGLRCQLDCAPQTNRLPAYRNIAAPVLVIGFADDVVTPPYLGRE-VADALPNGRYLQIP 266 (293)
T ss_dssp TCHHHHHHHHHHHHHSCCCCCHHHHHHHTSSCSSCCHHHHTTCCSCEEEEEETTCSSSCHHHHHH-HHHHSTTEEEEEET
T ss_pred cccccHHHHHHHHhhccccccHHHHhHhhhccccchHHHHhhCCCCEEEEEeCCCCCCCHHHHHH-HHHHCCCceEEEeC
Confidence 000000111111100000 000011111 1112234678899999999999999999875443 44566889999999
Q ss_pred CCCccccccccccCcccHHHHHHHHHHhh
Q 008093 393 HGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 393 ~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
++||+.+++. + ..+.+.|.+||+++
T Consensus 267 ~~gH~~~~~~--p--~~~~~~i~~fl~~~ 291 (293)
T 3hss_A 267 DAGHLGFFER--P--EAVNTAMLKFFASV 291 (293)
T ss_dssp TCCTTHHHHS--H--HHHHHHHHHHHHTC
T ss_pred CCcchHhhhC--H--HHHHHHHHHHHHhc
Confidence 9999998883 3 36889999999874
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 | Back alignment and structure |
|---|
Probab=99.88 E-value=3.4e-22 Score=197.68 Aligned_cols=237 Identities=11% Similarity=0.071 Sum_probs=137.6
Q ss_pred Cc-EEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEE
Q 008093 160 TP-IAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAI 238 (578)
Q Consensus 160 ~P-iVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lv 238 (578)
.| +||++||+++ +...| +.++..|. .+|+|+++|+||||.|+.. . .+ . +.++++.+.+..+ .+++++
T Consensus 12 g~~~vvllHG~~~-~~~~w-~~~~~~L~-~~~~vi~~Dl~G~G~S~~~-~-~~--~----~~~~~~~l~~~l~-~~~~lv 79 (258)
T 1m33_A 12 GNVHLVLLHGWGL-NAEVW-RCIDEELS-SHFTLHLVDLPGFGRSRGF-G-AL--S----LADMAEAVLQQAP-DKAIWL 79 (258)
T ss_dssp CSSEEEEECCTTC-CGGGG-GGTHHHHH-TTSEEEEECCTTSTTCCSC-C-CC--C----HHHHHHHHHTTSC-SSEEEE
T ss_pred CCCeEEEECCCCC-ChHHH-HHHHHHhh-cCcEEEEeeCCCCCCCCCC-C-Cc--C----HHHHHHHHHHHhC-CCeEEE
Confidence 35 7999999955 44445 67777776 4899999999999999754 1 11 1 2233444444444 689999
Q ss_pred EEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhH--HHhhHHHHHHHHHHHHHhHHHHHhhhccc-ccccCCHHH
Q 008093 239 GTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDR--FIGRRLIQKIYDRALTIGLQDYAQLHEPR-YSRLANWEG 315 (578)
Q Consensus 239 GhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~--~l~~~~~~~~~~~~l~~~l~~~~~~~~~~-l~~~~d~~~ 315 (578)
||||||.+++.+|.++|+ +|+++|++++......... .+.......+... +.............. .........
T Consensus 80 GhS~Gg~va~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (258)
T 1m33_A 80 GWSLGGLVASQIALTHPE--RVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQ-LSDDQQRTVERFLALQTMGTETARQ 156 (258)
T ss_dssp EETHHHHHHHHHHHHCGG--GEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHH-HHHHHHHHHHHHHHTTSTTSTTHHH
T ss_pred EECHHHHHHHHHHHHhhH--hhceEEEECCCCCccccccccCCCHHHHHHHHHH-HhccHHHHHHHHHHHHhcCCccchh
Confidence 999999999999999998 8999999986421111000 0000000111110 000111110000000 000000000
Q ss_pred HhccCCHHHHHhhhhhc-cCC---CCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEe
Q 008093 316 IKKSRSIRDFDSHATCL-VGK---FETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATT 391 (578)
Q Consensus 316 i~~~~s~~efd~~~~~~-~~g---~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~ 391 (578)
....+....... ... +......+........+.++++|+|+|+|++|+++|.+.... .....++.++.++
T Consensus 157 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~-~~~~~~~~~~~~i 230 (258)
T 1m33_A 157 -----DARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPM-LDKLWPHSESYIF 230 (258)
T ss_dssp -----HHHHHHHHHHTSCCCCHHHHHHHHHHHHHCCCTTGGGGCCSCEEEEEETTCSSSCGGGCC--CTTTCTTCEEEEE
T ss_pred -----hHHHHHHHHHhccCCcHHHHHHHHHHHHhCCHHHHHhhCCCCEEEEeecCCCCCCHHHHHH-HHHhCccceEEEe
Confidence 000111111000 000 001112233334445678899999999999999999775543 3445678899999
Q ss_pred CCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 392 WHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 392 ~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
+++||+.++|. | ..+.+.|.+|++++
T Consensus 231 ~~~gH~~~~e~--p--~~~~~~i~~fl~~~ 256 (258)
T 1m33_A 231 AKAAHAPFISH--P--AEFCHLLVALKQRV 256 (258)
T ss_dssp TTCCSCHHHHS--H--HHHHHHHHHHHTTS
T ss_pred CCCCCCccccC--H--HHHHHHHHHHHHhc
Confidence 99999999983 3 35889999999764
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.88 E-value=6e-23 Score=208.56 Aligned_cols=262 Identities=9% Similarity=-0.010 Sum_probs=150.7
Q ss_pred CCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeC
Q 008093 118 FSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 197 (578)
Q Consensus 118 ~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~ 197 (578)
.++++..+++.+| .+.+.... +.++|+||++||++++. ..| ..++..|.+ ||+|+++|+
T Consensus 43 ~~~~~~~v~~~~~-~~~~~~~g-----------------~~~~~~vv~lHG~~~~~-~~~-~~~~~~L~~-g~~vi~~D~ 101 (306)
T 2r11_A 43 VRCKSFYISTRFG-QTHVIASG-----------------PEDAPPLVLLHGALFSS-TMW-YPNIADWSS-KYRTYAVDI 101 (306)
T ss_dssp SCCEEEEECCTTE-EEEEEEES-----------------CTTSCEEEEECCTTTCG-GGG-TTTHHHHHH-HSEEEEECC
T ss_pred CCcceEEEecCCc-eEEEEeeC-----------------CCCCCeEEEECCCCCCH-HHH-HHHHHHHhc-CCEEEEecC
Confidence 4567777776654 55543321 13467899999996544 445 667788877 999999999
Q ss_pred CCC-CCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhh
Q 008093 198 RGL-GGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGD 276 (578)
Q Consensus 198 RG~-G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~ 276 (578)
||+ |.|...........+.+|+.++++. .+..+++++||||||.+++.++..+|+ +|+++|+++++.......
T Consensus 102 ~G~gG~s~~~~~~~~~~~~~~~l~~~l~~----l~~~~~~lvG~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~ 175 (306)
T 2r11_A 102 IGDKNKSIPENVSGTRTDYANWLLDVFDN----LGIEKSHMIGLSLGGLHTMNFLLRMPE--RVKSAAILSPAETFLPFH 175 (306)
T ss_dssp TTSSSSCEECSCCCCHHHHHHHHHHHHHH----TTCSSEEEEEETHHHHHHHHHHHHCGG--GEEEEEEESCSSBTSCCC
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHh----cCCCceeEEEECHHHHHHHHHHHhCcc--ceeeEEEEcCccccCccc
Confidence 999 7665432211112333455555544 445689999999999999999999998 899999999877553221
Q ss_pred HHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCc
Q 008093 277 RFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVS 356 (578)
Q Consensus 277 ~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~ 356 (578)
............ ..+...+........ . .....+.. .......+......+...............+.+++
T Consensus 176 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 246 (306)
T 2r11_A 176 HDFYKYALGLTA-SNGVETFLNWMMNDQ----N-VLHPIFVK---QFKAGVMWQDGSRNPNPNADGFPYVFTDEELRSAR 246 (306)
T ss_dssp HHHHHHHHTTTS-TTHHHHHHHHHTTTC----C-CSCHHHHH---HHHHHHHCCSSSCCCCCCTTSSSCBCCHHHHHTCC
T ss_pred HHHHHHHhHHHH-HHHHHHHHHHhhCCc----c-cccccccc---ccHHHHHHHHhhhhhhhhccCCCCCCCHHHHhcCC
Confidence 111000000000 000000001000000 0 00000000 00000011001111110000000011234567899
Q ss_pred cceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHH
Q 008093 357 IPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 357 vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
+|+|+|+|++|+++|.+..........+++++.+++++||+.++|. +..+.+.|.+||+
T Consensus 247 ~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~----p~~~~~~i~~fl~ 305 (306)
T 2r11_A 247 VPILLLLGEHEVIYDPHSALHRASSFVPDIEAEVIKNAGHVLSMEQ----PTYVNERVMRFFN 305 (306)
T ss_dssp SCEEEEEETTCCSSCHHHHHHHHHHHSTTCEEEEETTCCTTHHHHS----HHHHHHHHHHHHC
T ss_pred CCEEEEEeCCCcccCHHHHHHHHHHHCCCCEEEEeCCCCCCCcccC----HHHHHHHHHHHHh
Confidence 9999999999999997655433444578899999999999998883 3468899999985
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A | Back alignment and structure |
|---|
Probab=99.88 E-value=3.3e-22 Score=201.05 Aligned_cols=242 Identities=15% Similarity=0.161 Sum_probs=138.8
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCC-CCchHHHHHHHHHHHHHCCCCcEEEE
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN-AGWTEDAREVIGYLHHEYPKAPLFAI 238 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~-~~~~~Dl~~~i~~l~~~~~~~~i~lv 238 (578)
+|+||++||+.|++..+| ..+ ..+.++||+|+++|+||||.|+......++ ..+.+|+.++++++. +..+++++
T Consensus 28 ~~~vvllHG~~~~~~~~~-~~~-~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~dl~~~~~~l~---~~~~~~lv 102 (293)
T 1mtz_A 28 KAKLMTMHGGPGMSHDYL-LSL-RDMTKEGITVLFYDQFGCGRSEEPDQSKFTIDYGVEEAEALRSKLF---GNEKVFLM 102 (293)
T ss_dssp SEEEEEECCTTTCCSGGG-GGG-GGGGGGTEEEEEECCTTSTTSCCCCGGGCSHHHHHHHHHHHHHHHH---TTCCEEEE
T ss_pred CCeEEEEeCCCCcchhHH-HHH-HHHHhcCcEEEEecCCCCccCCCCCCCcccHHHHHHHHHHHHHHhc---CCCcEEEE
Confidence 377999999866665544 433 445678999999999999999765422233 344577777777762 23589999
Q ss_pred EEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhH---HHHHHHHHHHHH--------------hHHHHHh
Q 008093 239 GTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRR---LIQKIYDRALTI--------------GLQDYAQ 301 (578)
Q Consensus 239 GhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~---~~~~~~~~~l~~--------------~l~~~~~ 301 (578)
||||||.+++.+|.++|+ +|+++|+++++............. ....... .+.. ....+..
T Consensus 103 GhS~Gg~va~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (293)
T 1mtz_A 103 GSSYGGALALAYAVKYQD--HLKGLIVSGGLSSVPLTVKEMNRLIDELPAKYRD-AIKKYGSSGSYENPEYQEAVNYFYH 179 (293)
T ss_dssp EETHHHHHHHHHHHHHGG--GEEEEEEESCCSBHHHHHHHHHHHHHTSCHHHHH-HHHHHHHHTCTTCHHHHHHHHHHHH
T ss_pred EecHHHHHHHHHHHhCch--hhheEEecCCccChHHHHHHHHHHHHhcCHHHHH-HHHHhhccCCcChHHHHHHHHHHHH
Confidence 999999999999999998 899999999876532111100000 0000000 0000 0000000
Q ss_pred hhcccccccCCH-HHHhccCCHHHHHh--hhhh--ccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcc
Q 008093 302 LHEPRYSRLANW-EGIKKSRSIRDFDS--HATC--LVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIP 376 (578)
Q Consensus 302 ~~~~~l~~~~d~-~~i~~~~s~~efd~--~~~~--~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~ 376 (578)
.. +.....+ +.+.. ....+.. .+.. ....+... ......+....+.+|++|+|+|+|++| .++++...
T Consensus 180 ~~---~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~i~~P~lii~G~~D-~~~~~~~~ 252 (293)
T 1mtz_A 180 QH---LLRSEDWPPEVLK--SLEYAERRNVYRIMNGPNEFTIT-GTIKDWDITDKISAIKIPTLITVGEYD-EVTPNVAR 252 (293)
T ss_dssp HH---TSCSSCCCHHHHH--HHHHHHHSSHHHHHTCSBTTBCC-STTTTCBCTTTGGGCCSCEEEEEETTC-SSCHHHHH
T ss_pred hh---cccccCchHHHHH--hHhhhccchhhhhccCcceeccc-ccccCCChhhhhccCCCCEEEEeeCCC-CCCHHHHH
Confidence 00 0000000 00000 0000000 0000 00000000 000111223467789999999999999 55554332
Q ss_pred hHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 377 WDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 377 ~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
...+..++.++++++++||+.++|. + ..+.+.|.+||++.
T Consensus 253 -~~~~~~~~~~~~~~~~~gH~~~~e~--p--~~~~~~i~~fl~~~ 292 (293)
T 1mtz_A 253 -VIHEKIAGSELHVFRDCSHLTMWED--R--EGYNKLLSDFILKH 292 (293)
T ss_dssp -HHHHHSTTCEEEEETTCCSCHHHHS--H--HHHHHHHHHHHHTC
T ss_pred -HHHHhCCCceEEEeCCCCCCccccC--H--HHHHHHHHHHHHhc
Confidence 3455678899999999999999983 3 35889999999753
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=5.8e-22 Score=216.26 Aligned_cols=272 Identities=12% Similarity=0.082 Sum_probs=162.9
Q ss_pred CeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCC
Q 008093 119 SYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHR 198 (578)
Q Consensus 119 ~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~R 198 (578)
..+...+++.||.++.+... .++|+||++||++++ ...| ..++..|.++||+|+++|+|
T Consensus 236 ~~~~~~~~~~dg~~l~~~~~-------------------g~~p~vv~~HG~~~~-~~~~-~~~~~~l~~~G~~v~~~D~~ 294 (555)
T 3i28_A 236 DMSHGYVTVKPRVRLHFVEL-------------------GSGPAVCLCHGFPES-WYSW-RYQIPALAQAGYRVLAMDMK 294 (555)
T ss_dssp GSEEEEEEEETTEEEEEEEE-------------------CSSSEEEEECCTTCC-GGGG-TTHHHHHHHTTCEEEEECCT
T ss_pred ccceeEEEeCCCcEEEEEEc-------------------CCCCEEEEEeCCCCc-hhHH-HHHHHHHHhCCCEEEEecCC
Confidence 45778899999998886543 135789999999654 4445 67889999999999999999
Q ss_pred CCCCCCCCCC-CCCC-CCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhh
Q 008093 199 GLGGVSITSD-CFYN-AGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGD 276 (578)
Q Consensus 199 G~G~S~~~~~-~~~~-~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~ 276 (578)
|||.|..... ..+. ..+.+|+.++++++ +..+++++||||||.+++.++.++|+ +++++|+++++.......
T Consensus 295 G~G~S~~~~~~~~~~~~~~~~d~~~~~~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~ 368 (555)
T 3i28_A 295 GYGESSAPPEIEEYCMEVLCKEMVTFLDKL----GLSQAVFIGHDWGGMLVWYMALFYPE--RVRAVASLNTPFIPANPN 368 (555)
T ss_dssp TSTTSCCCSCGGGGSHHHHHHHHHHHHHHH----TCSCEEEEEETHHHHHHHHHHHHCGG--GEEEEEEESCCCCCCCTT
T ss_pred CCCCCCCCCCcccccHHHHHHHHHHHHHHc----CCCcEEEEEecHHHHHHHHHHHhChH--heeEEEEEccCCCCCCcc
Confidence 9999976532 1121 22345666665554 45689999999999999999999988 899999999875332110
Q ss_pred H----HHhh-HH--HHHH------HHHHHHHhHHHHHhhh----cccccccCCHH-------------HHhccCCHHH--
Q 008093 277 R----FIGR-RL--IQKI------YDRALTIGLQDYAQLH----EPRYSRLANWE-------------GIKKSRSIRD-- 324 (578)
Q Consensus 277 ~----~l~~-~~--~~~~------~~~~l~~~l~~~~~~~----~~~l~~~~d~~-------------~i~~~~s~~e-- 324 (578)
. .+.. .. .... ....+...+....... ........... ..........
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (555)
T 3i28_A 369 MSPLESIKANPVFDYQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQ 448 (555)
T ss_dssp SCHHHHHHTCGGGHHHHHHHSTTHHHHHHHHCHHHHHHHHSCCTTSCCCCCSSHHHHTSSSTTSCSSCCCCTTCCHHHHH
T ss_pred cchHHHHhcCCccchhHHhhCCCchHHHHhhhHHHHHHHHhccccccccccccccccccccccCccccccccccCHHHHH
Confidence 0 0000 00 0000 0000111111111110 00000000000 0000000111
Q ss_pred -HHhhhhhc-----cCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccc
Q 008093 325 -FDSHATCL-----VGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLA 398 (578)
Q Consensus 325 -fd~~~~~~-----~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~ 398 (578)
+...+... ..-+........ .+....+.++++|+|+|+|++|+++|.+.... .....++.++.+++++||+.
T Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~Pvlii~G~~D~~~~~~~~~~-~~~~~~~~~~~~~~~~gH~~ 526 (555)
T 3i28_A 449 FYVQQFKKSGFRGPLNWYRNMERNWK-WACKSLGRKILIPALMVTAEKDFVLVPQMSQH-MEDWIPHLKRGHIEDCGHWT 526 (555)
T ss_dssp HHHHHHTTTTTHHHHHTTSCHHHHHH-HHHTTTTCCCCSCEEEEEETTCSSSCGGGGTT-GGGTCTTCEEEEETTCCSCH
T ss_pred HHHHHHhcccchhHHHHHHhccccch-hhccccccccccCEEEEEeCCCCCcCHHHHHH-HHhhCCCceEEEeCCCCCCc
Confidence 11111000 001111111111 02234567899999999999999999876554 45566889999999999999
Q ss_pred cccccccCcccHHHHHHHHHHhhcC
Q 008093 399 FFEGLTAAGMWWVRAVNEYLGVLHS 423 (578)
Q Consensus 399 ~~eg~~~~~~w~~~~v~eFL~~~~~ 423 (578)
++|. +..+.+.|.+||++...
T Consensus 527 ~~e~----p~~~~~~i~~fl~~~~~ 547 (555)
T 3i28_A 527 QMDK----PTEVNQILIKWLDSDAR 547 (555)
T ss_dssp HHHS----HHHHHHHHHHHHHHHTC
T ss_pred chhC----HHHHHHHHHHHHHhccC
Confidence 9883 33688999999998654
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.3e-21 Score=197.36 Aligned_cols=239 Identities=12% Similarity=0.031 Sum_probs=138.0
Q ss_pred CcEEEEECCCC-C-CCccHHHHHHH-HHHHhCCceEEEEeCCCCCCCCCCCCCCCC-CCchHHHHHHHHHHHHHCCCCcE
Q 008093 160 TPIAIVIPGLT-S-DSAASYIRHLV-FNTAKRGWNVVVSNHRGLGGVSITSDCFYN-AGWTEDAREVIGYLHHEYPKAPL 235 (578)
Q Consensus 160 ~PiVVllHGl~-G-~s~~~yi~~l~-~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~-~~~~~Dl~~~i~~l~~~~~~~~i 235 (578)
+|+|||+||++ | ++...| ..++ ..|.+. |+|+++|+||||.|+......++ ..+.+|+.++++. .+..++
T Consensus 33 g~~vvllHG~~~~~~~~~~w-~~~~~~~L~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~~a~dl~~~l~~----l~~~~~ 106 (286)
T 2puj_A 33 GETVIMLHGGGPGAGGWSNY-YRNVGPFVDAG-YRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDA----LDIDRA 106 (286)
T ss_dssp SSEEEEECCCSTTCCHHHHH-TTTHHHHHHTT-CEEEEECCTTSTTSCCCCCSSCHHHHHHHHHHHHHHH----TTCCCE
T ss_pred CCcEEEECCCCCCCCcHHHH-HHHHHHHHhcc-CEEEEECCCCCCCCCCCCCcCcCHHHHHHHHHHHHHH----hCCCce
Confidence 46799999994 1 333344 5667 777764 99999999999999765321222 2334555555544 345689
Q ss_pred EEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchh---h--hhHHHhhHHHHHHHHHHHHHhHHHHHhhhccccccc
Q 008093 236 FAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL---I--GDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRL 310 (578)
Q Consensus 236 ~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~---~--~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~ 310 (578)
+++||||||.+++.+|.++|+ +|+++|+++++.... . ....+. .. ...+.......+.......... ...
T Consensus 107 ~lvGhS~GG~va~~~A~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~-~~~ 181 (286)
T 2puj_A 107 HLVGNAMGGATALNFALEYPD--RIGKLILMGPGGLGPSMFAPMPMEGIK-LL-FKLYAEPSYETLKQMLQVFLYD-QSL 181 (286)
T ss_dssp EEEEETHHHHHHHHHHHHCGG--GEEEEEEESCSCCCCCSSSCSSCHHHH-HH-HHHHHSCCHHHHHHHHHHHCSC-GGG
T ss_pred EEEEECHHHHHHHHHHHhChH--hhheEEEECccccCCCcccccchhhHH-HH-HHHhhCCcHHHHHHHHHHHhcC-Ccc
Confidence 999999999999999999998 899999999754211 0 000000 00 0000000000011111100000 000
Q ss_pred CCHHHHhccCCHHHHHhhhhhccCCCCCHHH-HH----HhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCC
Q 008093 311 ANWEGIKKSRSIRDFDSHATCLVGKFETVDT-YY----RNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKN 385 (578)
Q Consensus 311 ~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~-yy----~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~ 385 (578)
...+.+.. .+......+ ........ +. ........+.+|++|+|+|+|++|+++|.+.... ..+..++
T Consensus 182 ~~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~-~~~~~~~ 254 (286)
T 2puj_A 182 ITEELLQG-----RWEAIQRQP-EHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLK-LLWNIDD 254 (286)
T ss_dssp CCHHHHHH-----HHHHHHHCH-HHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETTCSSSCTHHHHH-HHHHSSS
T ss_pred CCHHHHHH-----HHHHhhcCH-HHHHHHHHHHhhhhccccchhhHHhhcCCCEEEEEECCCCccCHHHHHH-HHHHCCC
Confidence 00000000 000000000 00000000 00 0112335678899999999999999999875443 4566789
Q ss_pred EEEEEeCCCCccccccccccCcccHHHHHHHHHHh
Q 008093 386 VVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 386 ~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
.++.+++++||+.++|. | ..+.+.|.+||++
T Consensus 255 ~~~~~i~~~gH~~~~e~--p--~~~~~~i~~fl~~ 285 (286)
T 2puj_A 255 ARLHVFSKCGAWAQWEH--A--DEFNRLVIDFLRH 285 (286)
T ss_dssp EEEEEESSCCSCHHHHT--H--HHHHHHHHHHHHH
T ss_pred CeEEEeCCCCCCccccC--H--HHHHHHHHHHHhc
Confidence 99999999999999983 3 3589999999864
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=99.88 E-value=6.9e-22 Score=193.84 Aligned_cols=252 Identities=16% Similarity=0.103 Sum_probs=147.6
Q ss_pred EEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCC
Q 008093 123 QLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGG 202 (578)
Q Consensus 123 ~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~ 202 (578)
+.+...||..+.+.... ++|+||++||++++ ...| ..++..|. .||+|+++|+||||.
T Consensus 5 ~~~~~~~g~~l~~~~~g-------------------~~~~vv~lHG~~~~-~~~~-~~~~~~l~-~~~~vi~~d~~G~G~ 62 (262)
T 3r0v_A 5 QTVPSSDGTPIAFERSG-------------------SGPPVVLVGGALST-RAGG-APLAERLA-PHFTVICYDRRGRGD 62 (262)
T ss_dssp CEEECTTSCEEEEEEEE-------------------CSSEEEEECCTTCC-GGGG-HHHHHHHT-TTSEEEEECCTTSTT
T ss_pred heEEcCCCcEEEEEEcC-------------------CCCcEEEECCCCcC-hHHH-HHHHHHHh-cCcEEEEEecCCCcC
Confidence 35677899998865432 24679999999654 4445 77888887 899999999999999
Q ss_pred CCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhH
Q 008093 203 VSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRR 282 (578)
Q Consensus 203 S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~ 282 (578)
|+... ......+.+|+.++++++ + .+++++||||||.+++.++.++| +|+++|+++++.............
T Consensus 63 S~~~~-~~~~~~~~~~~~~~~~~l----~-~~~~l~G~S~Gg~ia~~~a~~~p---~v~~lvl~~~~~~~~~~~~~~~~~ 133 (262)
T 3r0v_A 63 SGDTP-PYAVEREIEDLAAIIDAA----G-GAAFVFGMSSGAGLSLLAAASGL---PITRLAVFEPPYAVDDSRPPVPPD 133 (262)
T ss_dssp CCCCS-SCCHHHHHHHHHHHHHHT----T-SCEEEEEETHHHHHHHHHHHTTC---CEEEEEEECCCCCCSTTSCCCCTT
T ss_pred CCCCC-CCCHHHHHHHHHHHHHhc----C-CCeEEEEEcHHHHHHHHHHHhCC---CcceEEEEcCCcccccccchhhhH
Confidence 97653 211123345555555544 4 68999999999999999999976 599999999876543221100001
Q ss_pred HHHHHHHHH----HHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHH-HHHHhCCcccccCCCcc
Q 008093 283 LIQKIYDRA----LTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVD-TYYRNCSSSTYVGNVSI 357 (578)
Q Consensus 283 ~~~~~~~~~----l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~-~yy~~~s~~~~l~~I~v 357 (578)
....+.... ....+..+...... ... ...+................ .+.... ...........+.++++
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~i~~ 207 (262)
T 3r0v_A 134 YQTRLDALLAEGRRGDAVTYFMTEGVG-VPP-DLVAQMQQAPMWPGMEAVAH----TLPYDHAVMGDNTIPTARFASISI 207 (262)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHTSC-CCH-HHHHHHHTSTTHHHHHHTGG----GHHHHHHHHTTSCCCHHHHTTCCS
T ss_pred HHHHHHHHhhccchhhHHHHHhhcccC-CCH-HHHHHHHhhhcccchHHHHh----hhhhhhhhhhcCCCCHHHcCcCCC
Confidence 111111100 00011111111000 000 00000111111111100000 000000 00001123456788999
Q ss_pred ceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHH
Q 008093 358 PLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 358 PvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
|+|+|+|++|+++|.+.... ..+..++.++.+++++||+ + ++..+.+.|.+||+
T Consensus 208 P~lii~G~~D~~~~~~~~~~-~~~~~~~~~~~~~~~~gH~---~----~p~~~~~~i~~fl~ 261 (262)
T 3r0v_A 208 PTLVMDGGASPAWIRHTAQE-LADTIPNARYVTLENQTHT---V----APDAIAPVLVEFFT 261 (262)
T ss_dssp CEEEEECTTCCHHHHHHHHH-HHHHSTTEEEEECCCSSSS---C----CHHHHHHHHHHHHC
T ss_pred CEEEEeecCCCCCCHHHHHH-HHHhCCCCeEEEecCCCcc---c----CHHHHHHHHHHHHh
Confidence 99999999999998765443 4566788999999999993 3 23358899999985
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A | Back alignment and structure |
|---|
Probab=99.88 E-value=7.7e-22 Score=213.74 Aligned_cols=266 Identities=14% Similarity=0.097 Sum_probs=160.5
Q ss_pred CeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCC
Q 008093 119 SYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHR 198 (578)
Q Consensus 119 ~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~R 198 (578)
+|....+...||..+.+... .++|+||++||++++ ...| ..++..|++.||+|+++|+|
T Consensus 2 p~i~~~~~~~dG~~l~y~~~-------------------G~gp~VV~lHG~~~~-~~~~-~~l~~~La~~Gy~Vi~~D~r 60 (456)
T 3vdx_A 2 PFITVGQENSTSIDLYYEDH-------------------GTGVPVVLIHGFPLS-GHSW-ERQSAALLDAGYRVITYDRR 60 (456)
T ss_dssp CEEEEEEETTEEEEEEEEEE-------------------SSSEEEEEECCTTCC-GGGG-TTHHHHHHHHTEEEEEECCT
T ss_pred CeEeecccccCCeEEEEEEe-------------------CCCCEEEEECCCCCc-HHHH-HHHHHHHHHCCcEEEEECCC
Confidence 34445556678877775432 245889999999654 4445 67888998899999999999
Q ss_pred CCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhc-CCCCCccEEEEEcCCcchhhhh-
Q 008093 199 GLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEE-GEKTPVAGAAAICSPWDLLIGD- 276 (578)
Q Consensus 199 G~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~-p~~~~V~~~Vlis~p~d~~~~~- 276 (578)
|||.|+..........+.+|+.++++++ +..+++++||||||.+++.+++.+ |+ .++++|+++++.......
T Consensus 61 G~G~S~~~~~~~s~~~~a~dl~~~l~~l----~~~~v~LvGhS~GG~ia~~~aa~~~p~--~v~~lVli~~~~~~~~~~~ 134 (456)
T 3vdx_A 61 GFGQSSQPTTGYDYDTFAADLNTVLETL----DLQDAVLVGFSMGTGEVARYVSSYGTA--RIAAVAFLASLEPFLLKTD 134 (456)
T ss_dssp TSTTSCCCSSCCSHHHHHHHHHHHHHHH----TCCSEEEEEEGGGGHHHHHHHHHHCSS--SEEEEEEESCCCSCCBCCS
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCCCeEEEEECHHHHHHHHHHHhcchh--heeEEEEeCCccccccccc
Confidence 9999976543332234567777777776 345899999999999999999988 66 899999999765321110
Q ss_pred ----HHHhhHHHHHHHHHHHHH---hHHHHHhhhcc---cccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHH--
Q 008093 277 ----RFIGRRLIQKIYDRALTI---GLQDYAQLHEP---RYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYR-- 344 (578)
Q Consensus 277 ----~~l~~~~~~~~~~~~l~~---~l~~~~~~~~~---~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~-- 344 (578)
..........+....... .+......... .......... ...+.... ...........+.
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~--~~~~~~~~~~~~~~~ 206 (456)
T 3vdx_A 135 DNPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEA------VRNSWNTA--ASGGFFAAAAAPTTW 206 (456)
T ss_dssp SCCSCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHTTTTTSBTTTBCHHH------HHHHHHHH--HTSCTTHHHHGGGGT
T ss_pred ccccccchHHHHHHHHHhhhccchHHHHHHHHHHhcccccccccccHHH------HHHHhhhc--cccchhhhhhhhhhh
Confidence 000000011111110000 00011100000 0000000000 00000000 0011111111111
Q ss_pred hCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcC
Q 008093 345 NCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHS 423 (578)
Q Consensus 345 ~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~ 423 (578)
..+....+.+|++|+|+|+|++|+++|.+..........+++++.+++++||+.+.+. +..+.+.|.+||++...
T Consensus 207 ~~d~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~l~~~~~~~~~~~i~gagH~~~~e~----p~~v~~~I~~FL~~~l~ 281 (456)
T 3vdx_A 207 YTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLWTH----AEEVNTALLAFLAKALE 281 (456)
T ss_dssp TCCCTTTSTTCCSCCEEEEETTCSSSCGGGTHHHHHHHCTTSEEEEETTCCSCTTTTT----HHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHhhhCCCCEEEEEeCCCCCcCHHHHHHHHHHHCCCceEEEeCCCCCcchhhC----HHHHHHHHHHHHHHhhc
Confidence 1233456789999999999999999998833334556678899999999999988873 33588999999988654
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.88 E-value=6.5e-22 Score=194.86 Aligned_cols=260 Identities=13% Similarity=0.080 Sum_probs=149.1
Q ss_pred eeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCC
Q 008093 120 YRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRG 199 (578)
Q Consensus 120 y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG 199 (578)
++++.+++ +|+++.+... .++|+||++||++++... | ..++..|.+ ||+|+++|+||
T Consensus 3 ~~~~~~~~-~~~~~~y~~~-------------------g~~~~vv~~HG~~~~~~~-~-~~~~~~L~~-~~~vi~~d~~G 59 (278)
T 3oos_A 3 WTTNIIKT-PRGKFEYFLK-------------------GEGPPLCVTHLYSEYNDN-G-NTFANPFTD-HYSVYLVNLKG 59 (278)
T ss_dssp CEEEEEEE-TTEEEEEEEE-------------------CSSSEEEECCSSEECCTT-C-CTTTGGGGG-TSEEEEECCTT
T ss_pred cccCcEec-CCceEEEEec-------------------CCCCeEEEEcCCCcchHH-H-HHHHHHhhc-CceEEEEcCCC
Confidence 46666666 5556665432 235689999999665544 4 567777776 99999999999
Q ss_pred CCCCCCCCC-CCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhh--
Q 008093 200 LGGVSITSD-CFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGD-- 276 (578)
Q Consensus 200 ~G~S~~~~~-~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~-- 276 (578)
||.|+.... ..+. .+|+.+.+..+.+..+..+++++||||||.+++.++.++|+ +|+++|+++++.......
T Consensus 60 ~G~s~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~lvG~S~Gg~~a~~~a~~~p~--~v~~~vl~~~~~~~~~~~~~ 134 (278)
T 3oos_A 60 CGNSDSAKNDSEYS---MTETIKDLEAIREALYINKWGFAGHSAGGMLALVYATEAQE--SLTKIIVGGAAASKEYASHK 134 (278)
T ss_dssp STTSCCCSSGGGGS---HHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHHGG--GEEEEEEESCCSBGGGGGST
T ss_pred CCCCCCCCCcccCc---HHHHHHHHHHHHHHhCCCeEEEEeecccHHHHHHHHHhCch--hhCeEEEecCcccccccccc
Confidence 999976532 1111 23344334444444455699999999999999999999998 899999999876511100
Q ss_pred HH------HhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCC--CCCHHHHHH----
Q 008093 277 RF------IGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGK--FETVDTYYR---- 344 (578)
Q Consensus 277 ~~------l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g--~~~~~~yy~---- 344 (578)
.. ....................... ..+. ..+. .........+...+...... ......++.
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (278)
T 3oos_A 135 DSIYCSKNVKFNRIVSIMNALNDDSTVQEER---KALS--REWA-LMSFYSEEKLEEALKLPNSGKTVGNRLNYFRQVEY 208 (278)
T ss_dssp TSTTSTTSTTHHHHHHHHHHHTCTTSCHHHH---HHHH--HHHH-HHHCSCHHHHHHHTTSCCCCEECHHHHHHHHHTTG
T ss_pred chhhhhhchhHHHHHHHHHhhcccccCchHH---HHHH--HHHh-hcccCCcHHHHHHhhccccchhHHHHHHHhhhccc
Confidence 00 00000000100000000000000 0000 0000 00001111111111111110 001112222
Q ss_pred -hCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHH
Q 008093 345 -NCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYL 418 (578)
Q Consensus 345 -~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL 418 (578)
..+....+.++++|+|+|+|++|+++|.+.... .....++.++.+++++||+.++|. + ..+.+.|.+||
T Consensus 209 ~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~-~~~~~~~~~~~~~~~~gH~~~~~~--p--~~~~~~i~~fl 278 (278)
T 3oos_A 209 KDYDVRQKLKFVKIPSFIYCGKHDVQCPYIFSCE-IANLIPNATLTKFEESNHNPFVEE--I--DKFNQFVNDTL 278 (278)
T ss_dssp GGCBCHHHHTTCCSCEEEEEETTCSSSCHHHHHH-HHHHSTTEEEEEETTCSSCHHHHS--H--HHHHHHHHHTC
T ss_pred ccccHHHHHhCCCCCEEEEEeccCCCCCHHHHHH-HHhhCCCcEEEEcCCcCCCccccc--H--HHHHHHHHhhC
Confidence 223345678899999999999999999875443 445568999999999999999883 3 35777777774
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.88 E-value=8.6e-22 Score=203.42 Aligned_cols=262 Identities=15% Similarity=0.133 Sum_probs=151.9
Q ss_pred eeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHh-CCceEEEEeCC
Q 008093 120 YRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAK-RGWNVVVSNHR 198 (578)
Q Consensus 120 y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~-~Gy~Vvv~D~R 198 (578)
++...+.. +|..+.+....+.+ .+..+++||++||++|++.. | ...+..|.+ .||+|+++|+|
T Consensus 28 ~~~~~v~~-~g~~l~y~~~G~~~-------------~~~~g~plvllHG~~~~~~~-w-~~~~~~l~~~~~~~Via~D~r 91 (330)
T 3nwo_A 28 VSSRTVPF-GDHETWVQVTTPEN-------------AQPHALPLIVLHGGPGMAHN-Y-VANIAALADETGRTVIHYDQV 91 (330)
T ss_dssp -CEEEEEE-TTEEEEEEEECCSS-------------CCTTCCCEEEECCTTTCCSG-G-GGGGGGHHHHHTCCEEEECCT
T ss_pred CcceeEee-cCcEEEEEEecCcc-------------CCCCCCcEEEECCCCCCchh-H-HHHHHHhccccCcEEEEECCC
Confidence 34455554 67777665543311 01112358899999776554 4 345566665 69999999999
Q ss_pred CCCCCCCCCC---CCCC-CCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhh
Q 008093 199 GLGGVSITSD---CFYN-AGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLI 274 (578)
Q Consensus 199 G~G~S~~~~~---~~~~-~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~ 274 (578)
|||.|+...+ ..+. ..+.+|+.++++.+. ..+++++||||||.+++.+|.++|+ +|.++|+++++.....
T Consensus 92 G~G~S~~~~~~~~~~~~~~~~a~dl~~ll~~lg----~~~~~lvGhSmGG~va~~~A~~~P~--~v~~lvl~~~~~~~~~ 165 (330)
T 3nwo_A 92 GCGNSTHLPDAPADFWTPQLFVDEFHAVCTALG----IERYHVLGQSWGGMLGAEIAVRQPS--GLVSLAICNSPASMRL 165 (330)
T ss_dssp TSTTSCCCTTSCGGGCCHHHHHHHHHHHHHHHT----CCSEEEEEETHHHHHHHHHHHTCCT--TEEEEEEESCCSBHHH
T ss_pred CCCCCCCCCCCccccccHHHHHHHHHHHHHHcC----CCceEEEecCHHHHHHHHHHHhCCc--cceEEEEecCCcchHH
Confidence 9999975322 1222 234577777777664 4589999999999999999999999 8999999998764321
Q ss_pred hhHHHhhH---H---HHHHHHHHHH----------HhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhh--------
Q 008093 275 GDRFIGRR---L---IQKIYDRALT----------IGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHAT-------- 330 (578)
Q Consensus 275 ~~~~l~~~---~---~~~~~~~~l~----------~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~-------- 330 (578)
........ . ....+..... .....+..... ... .....++...+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--------~~~~~~~~~~~~~~~~~~~~ 234 (330)
T 3nwo_A 166 WSEAAGDLRAQLPAETRAALDRHEAAGTITHPDYLQAAAEFYRRHV---CRV--------VPTPQDFADSVAQMEAEPTV 234 (330)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHT---CCS--------SSCCHHHHHHHHHHHHSCHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHhh---ccc--------cCCCHHHHHHHHhhccchhh
Confidence 11100000 0 0000000000 00000000000 000 000000000000
Q ss_pred -hccC---CCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccC
Q 008093 331 -CLVG---KFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAA 406 (578)
Q Consensus 331 -~~~~---g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~ 406 (578)
.... .+... ......+....+.+|++|+|+|+|++|+++|.. . ....+..++.++.+++++||+.++|. |
T Consensus 235 ~~~~~~~~~~~~~-~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~p~~-~-~~~~~~ip~~~~~~i~~~gH~~~~e~--p- 308 (330)
T 3nwo_A 235 YHTMNGPNEFHVV-GTLGDWSVIDRLPDVTAPVLVIAGEHDEATPKT-W-QPFVDHIPDVRSHVFPGTSHCTHLEK--P- 308 (330)
T ss_dssp HHHHTCSCSSSCC-SGGGGCBCGGGGGGCCSCEEEEEETTCSSCHHH-H-HHHHHHCSSEEEEEETTCCTTHHHHS--H-
T ss_pred hhcccCchhhhhh-ccccCCchhhhcccCCCCeEEEeeCCCccChHH-H-HHHHHhCCCCcEEEeCCCCCchhhcC--H-
Confidence 0000 00000 000111234567889999999999999988742 2 23456679999999999999999993 3
Q ss_pred cccHHHHHHHHHHhh
Q 008093 407 GMWWVRAVNEYLGVL 421 (578)
Q Consensus 407 ~~w~~~~v~eFL~~~ 421 (578)
..+.+.|.+||++.
T Consensus 309 -~~~~~~i~~FL~~~ 322 (330)
T 3nwo_A 309 -EEFRAVVAQFLHQH 322 (330)
T ss_dssp -HHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHhc
Confidence 46999999999875
|
| >4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A | Back alignment and structure |
|---|
Probab=99.88 E-value=2.5e-22 Score=197.24 Aligned_cols=242 Identities=12% Similarity=0.110 Sum_probs=140.7
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCC---CCCCC-CCchHHHHHHHHHHHHHCCCC
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITS---DCFYN-AGWTEDAREVIGYLHHEYPKA 233 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~---~~~~~-~~~~~Dl~~~i~~l~~~~~~~ 233 (578)
+.+|+||++||+++ +...| ..++..|.+ ||+|+++|+||||.|.... ...+. ..+.+|+.++++. .+..
T Consensus 18 ~~~p~vv~~HG~~~-~~~~~-~~~~~~l~~-g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 90 (269)
T 4dnp_A 18 SGERVLVLAHGFGT-DQSAW-NRILPFFLR-DYRVVLYDLVCAGSVNPDFFDFRRYTTLDPYVDDLLHILDA----LGID 90 (269)
T ss_dssp SCSSEEEEECCTTC-CGGGG-TTTGGGGTT-TCEEEEECCTTSTTSCGGGCCTTTCSSSHHHHHHHHHHHHH----TTCC
T ss_pred CCCCEEEEEeCCCC-cHHHH-HHHHHHHhC-CcEEEEEcCCCCCCCCCCCCCccccCcHHHHHHHHHHHHHh----cCCC
Confidence 35689999999965 44445 677788877 9999999999999996521 11111 2233444444443 4556
Q ss_pred cEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHH---HhhHHHHHHHHHHHHHhHHHHHhhhccccccc
Q 008093 234 PLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRF---IGRRLIQKIYDRALTIGLQDYAQLHEPRYSRL 310 (578)
Q Consensus 234 ~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~---l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~ 310 (578)
+++++||||||.+++.++.++|+ +|+++|+++++........+ +........+.. +............+.....
T Consensus 91 ~~~l~GhS~Gg~~a~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 167 (269)
T 4dnp_A 91 CCAYVGHSVSAMIGILASIRRPE--LFSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSA-MEANYEAWVNGFAPLAVGA 167 (269)
T ss_dssp SEEEEEETHHHHHHHHHHHHCTT--TEEEEEEESCCSCCBCBTTBCCSBCHHHHHHHHHH-HHHCHHHHHHHHHHHHHCS
T ss_pred eEEEEccCHHHHHHHHHHHhCcH--hhceeEEeCCCCCCCChHHhccccchHHHHHHHHh-ccccHHHHHHHhhhhhccC
Confidence 99999999999999999999998 89999999985432211100 000000111111 1111111111100000000
Q ss_pred CCHHHHhccCCHHHHHhhhhhc-cCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCC-EEE
Q 008093 311 ANWEGIKKSRSIRDFDSHATCL-VGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKN-VVL 388 (578)
Q Consensus 311 ~d~~~i~~~~s~~efd~~~~~~-~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~-~~l 388 (578)
.... ...++...+... ...+..........+....+.++++|+|+++|++|+++|.+.... .....++ +++
T Consensus 168 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~-~~~~~~~~~~~ 240 (269)
T 4dnp_A 168 DVPA------AVREFSRTLFNMRPDITLFVSRTVFNSDMRGVLGLVKVPCHIFQTARDHSVPASVATY-LKNHLGGKNTV 240 (269)
T ss_dssp SCHH------HHHHHHHHHHHSCHHHHHHHHHHHHTCCCGGGGGGCCSCEEEEEEESBTTBCHHHHHH-HHHHSSSCEEE
T ss_pred CChh------HHHHHHHHHHccCcchhhhHhhhhcchhhHhhhccccCCEEEEecCCCcccCHHHHHH-HHHhCCCCceE
Confidence 0000 011111111000 000011111122334456788899999999999999999875544 3344555 899
Q ss_pred EEeCCCCccccccccccCcccHHHHHHHHHHh
Q 008093 389 ATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 389 ~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
.+++++||+.+.|. + ..+.+.|.+||++
T Consensus 241 ~~~~~~gH~~~~~~--p--~~~~~~i~~fl~~ 268 (269)
T 4dnp_A 241 HWLNIEGHLPHLSA--P--TLLAQELRRALSH 268 (269)
T ss_dssp EEEEEESSCHHHHC--H--HHHHHHHHHHHC-
T ss_pred EEeCCCCCCccccC--H--HHHHHHHHHHHhh
Confidence 99999999999883 3 3588889999864
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} | Back alignment and structure |
|---|
Probab=99.88 E-value=7e-22 Score=194.32 Aligned_cols=232 Identities=14% Similarity=0.093 Sum_probs=142.1
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHh-CCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEE
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAK-RGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFA 237 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~-~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~l 237 (578)
++|+||++||+++ +...| ..++..|.+ .||+|+++|+||||.|+.... .....+.+|+.++++++ .+..++++
T Consensus 20 ~~~~vv~lhG~~~-~~~~~-~~~~~~l~~~~g~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~~~l~~~---~~~~~~~l 93 (272)
T 3fsg_A 20 SGTPIIFLHGLSL-DKQST-CLFFEPLSNVGQYQRIYLDLPGMGNSDPISP-STSDNVLETLIEAIEEI---IGARRFIL 93 (272)
T ss_dssp CSSEEEEECCTTC-CHHHH-HHHHTTSTTSTTSEEEEECCTTSTTCCCCSS-CSHHHHHHHHHHHHHHH---HTTCCEEE
T ss_pred CCCeEEEEeCCCC-cHHHH-HHHHHHHhccCceEEEEecCCCCCCCCCCCC-CCHHHHHHHHHHHHHHH---hCCCcEEE
Confidence 3567999999954 45455 667777776 799999999999999987654 21123445655555552 34578999
Q ss_pred EEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhH---------------HHhhHHHHHHHHHHHH---HhHHHH
Q 008093 238 IGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDR---------------FIGRRLIQKIYDRALT---IGLQDY 299 (578)
Q Consensus 238 vGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~---------------~l~~~~~~~~~~~~l~---~~l~~~ 299 (578)
+||||||.+++.++.++|+ +|+++|+++++........ .+.......+...... .....+
T Consensus 94 ~G~S~Gg~~a~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (272)
T 3fsg_A 94 YGHSYGGYLAQAIAFHLKD--QTLGVFLTCPVITADHSKRLTGKHINILEEDINPVENKEYFADFLSMNVIINNQAWHDY 171 (272)
T ss_dssp EEEEHHHHHHHHHHHHSGG--GEEEEEEEEECSSCCGGGCCCCCCCCEECSCCCCCTTGGGHHHHHHHCSEESHHHHHHH
T ss_pred EEeCchHHHHHHHHHhChH--hhheeEEECcccccCccccccccchhhhhhhhhcccCHHHHHHHHHHhccCCCchhHHH
Confidence 9999999999999999988 8999999998652211100 0000000000000000 000000
Q ss_pred HhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHH
Q 008093 300 AQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDE 379 (578)
Q Consensus 300 ~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~ 379 (578)
..... .... .. ...+...+.. ...+.. .....+.++++|+|+|+|++|+++|.+.... .
T Consensus 172 ~~~~~---------~~~~-~~-~~~~~~~~~~-~~~~~~--------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~-~ 230 (272)
T 3fsg_A 172 QNLII---------PGLQ-KE-DKTFIDQLQN-NYSFTF--------EEKLKNINYQFPFKIMVGRNDQVVGYQEQLK-L 230 (272)
T ss_dssp HHHTH---------HHHH-HC-CHHHHHHHTT-SCSCTT--------HHHHTTCCCSSCEEEEEETTCTTTCSHHHHH-H
T ss_pred HHHhh---------hhhh-hc-cHHHHHHHhh-hcCCCh--------hhhhhhccCCCCEEEEEeCCCCcCCHHHHHH-H
Confidence 00000 0000 00 0011111100 011100 0112458899999999999999999876543 4
Q ss_pred HhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcC
Q 008093 380 CRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHS 423 (578)
Q Consensus 380 ~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~ 423 (578)
....++.++.+++++||+.+.|. +..+.+.+.+||+++.+
T Consensus 231 ~~~~~~~~~~~~~~~gH~~~~~~----~~~~~~~i~~fl~~~~~ 270 (272)
T 3fsg_A 231 INHNENGEIVLLNRTGHNLMIDQ----REAVGFHFDLFLDELNS 270 (272)
T ss_dssp HTTCTTEEEEEESSCCSSHHHHT----HHHHHHHHHHHHHHHHC
T ss_pred HHhcCCCeEEEecCCCCCchhcC----HHHHHHHHHHHHHHhhc
Confidence 56678999999999999999883 34688999999998753
|
| >3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.2e-21 Score=190.81 Aligned_cols=256 Identities=11% Similarity=0.050 Sum_probs=159.8
Q ss_pred eEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCC---CCCccHHHHHHHHHHHhCCceEEEEeC
Q 008093 121 RRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLT---SDSAASYIRHLVFNTAKRGWNVVVSNH 197 (578)
Q Consensus 121 ~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~---G~s~~~yi~~l~~~l~~~Gy~Vvv~D~ 197 (578)
.+..+...||..+.+.++.+.. +..+|+||++||++ |+... |...++..+.+. |+|+++|+
T Consensus 4 ~~~~~~~~dg~~l~~~~~~p~~--------------~~~~~~vv~~HG~~~~~~~~~~-~~~~~~~~l~~~-~~v~~~d~ 67 (275)
T 3h04_A 4 IKYKVITKDAFALPYTIIKAKN--------------QPTKGVIVYIHGGGLMFGKAND-LSPQYIDILTEH-YDLIQLSY 67 (275)
T ss_dssp EEEEEECTTSCEEEEEEECCSS--------------SSCSEEEEEECCSTTTSCCTTC-SCHHHHHHHTTT-EEEEEECC
T ss_pred eEEEEecCCcEEEEEEEEccCC--------------CCCCCEEEEEECCcccCCchhh-hHHHHHHHHHhC-ceEEeecc
Confidence 4567888999999988887632 24678999999986 43333 325677777776 99999999
Q ss_pred CCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhH
Q 008093 198 RGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDR 277 (578)
Q Consensus 198 RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~ 277 (578)
||+|.+.. ....+|+.++++++.+..+..+++++||||||.+++.++.. + +++++|+++++.+......
T Consensus 68 ~~~~~~~~-------~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~--~--~v~~~v~~~~~~~~~~~~~ 136 (275)
T 3h04_A 68 RLLPEVSL-------DCIIEDVYASFDAIQSQYSNCPIFTFGRSSGAYLSLLIARD--R--DIDGVIDFYGYSRINTEPF 136 (275)
T ss_dssp CCTTTSCH-------HHHHHHHHHHHHHHHHTTTTSCEEEEEETHHHHHHHHHHHH--S--CCSEEEEESCCSCSCSHHH
T ss_pred ccCCcccc-------chhHHHHHHHHHHHHhhCCCCCEEEEEecHHHHHHHHHhcc--C--CccEEEecccccccccccc
Confidence 99987532 13468999999999998888899999999999999999998 4 7999999998876632211
Q ss_pred HHhhHHHHHHHHHHHHHhHHHHHhhhcc--cccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHH--------hCC
Q 008093 278 FIGRRLIQKIYDRALTIGLQDYAQLHEP--RYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYR--------NCS 347 (578)
Q Consensus 278 ~l~~~~~~~~~~~~l~~~l~~~~~~~~~--~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~--------~~s 347 (578)
..... .+................. .......... .....+... ......++. ...
T Consensus 137 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 201 (275)
T 3h04_A 137 KTTNS----YYAKIAQSINETMIAQLTSPTPVVQDQIAQR----FLIYVYARG-------TGKWINMINIADYTDSKYNI 201 (275)
T ss_dssp HSCCH----HHHHHHTTSCHHHHHTTSCSSCCSSCSSGGG----HHHHHHHHH-------HTCHHHHHCCSCTTSGGGSC
T ss_pred ccccc----hhhcccccchHHHHhcccCCCCcCCCccccc----hhhhhhhhh-------cCchHHhhcccccccccccc
Confidence 11111 1110000000000000000 0000000000 000000000 000000010 001
Q ss_pred cccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccC-cccHHHHHHHHHHhhc
Q 008093 348 SSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAA-GMWWVRAVNEYLGVLH 422 (578)
Q Consensus 348 ~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~-~~w~~~~v~eFL~~~~ 422 (578)
....+.+++ |+|+++|++|+++|.+.... .....++..+.+++++||..+.+. +. ...+.+.+.+||++..
T Consensus 202 ~~~~~~~~~-P~lii~G~~D~~~~~~~~~~-~~~~~~~~~~~~~~~~~H~~~~~~--~~~~~~~~~~i~~fl~~~l 273 (275)
T 3h04_A 202 APDELKTLP-PVFIAHCNGDYDVPVEESEH-IMNHVPHSTFERVNKNEHDFDRRP--NDEAITIYRKVVDFLNAIT 273 (275)
T ss_dssp CHHHHTTCC-CEEEEEETTCSSSCTHHHHH-HHTTCSSEEEEEECSSCSCTTSSC--CHHHHHHHHHHHHHHHHHH
T ss_pred ccchhccCC-CEEEEecCCCCCCChHHHHH-HHHhcCCceEEEeCCCCCCcccCC--chhHHHHHHHHHHHHHHHh
Confidence 123346777 99999999999998775543 456678899999999999988773 21 1357889999998754
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.1e-22 Score=197.57 Aligned_cols=247 Identities=13% Similarity=0.083 Sum_probs=143.9
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEE
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAI 238 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lv 238 (578)
.+|+||++||+++ +...| ..++..|.+ ||+|+++|+||||.|.............+|..+.+..+.+..+..+++++
T Consensus 27 ~~~~vv~lHG~~~-~~~~~-~~~~~~l~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv 103 (282)
T 3qvm_A 27 GEKTVLLAHGFGC-DQNMW-RFMLPELEK-QFTVIVFDYVGSGQSDLESFSTKRYSSLEGYAKDVEEILVALDLVNVSII 103 (282)
T ss_dssp SSCEEEEECCTTC-CGGGG-TTTHHHHHT-TSEEEECCCTTSTTSCGGGCCTTGGGSHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred CCCeEEEECCCCC-CcchH-HHHHHHHhc-CceEEEEecCCCCCCCCCCCCccccccHHHHHHHHHHHHHHcCCCceEEE
Confidence 3488999999965 44445 678888887 99999999999999976532111111223333333333344456799999
Q ss_pred EEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhH----HHhhHHHHHHHHHHHHHhHHHHHhhhcccccc-cCCH
Q 008093 239 GTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDR----FIGRRLIQKIYDRALTIGLQDYAQLHEPRYSR-LANW 313 (578)
Q Consensus 239 GhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~----~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~-~~d~ 313 (578)
||||||.+++.++.++|+ +++++|+++++........ .+........+.. +................. ....
T Consensus 104 G~S~Gg~~a~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 180 (282)
T 3qvm_A 104 GHSVSSIIAGIASTHVGD--RISDITMICPSPCFMNFPPDYVGGFERDDLEELINL-MDKNYIGWANYLAPLVMGASHSS 180 (282)
T ss_dssp EETHHHHHHHHHHHHHGG--GEEEEEEESCCSBSBEETTTEECSBCHHHHHHHHHH-HHHCHHHHHHHHHHHHHCTTSCH
T ss_pred EecccHHHHHHHHHhCch--hhheEEEecCcchhccCchhhhchhccccHHHHHHH-HhcchhhHHHHHHhhccCCccch
Confidence 999999999999999988 8999999998653322110 0000000111110 000000000000000000 0000
Q ss_pred HHHhccCCHHHHHhhhhhc-cCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeC
Q 008093 314 EGIKKSRSIRDFDSHATCL-VGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTW 392 (578)
Q Consensus 314 ~~i~~~~s~~efd~~~~~~-~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~ 392 (578)
.. ...+...+... ...+...............+.++++|+|+++|++|+++|.+.... .....++.++.+++
T Consensus 181 ~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~-~~~~~~~~~~~~~~ 253 (282)
T 3qvm_A 181 EL------IGELSGSFCTTDPIVAKTFAKATFFSDYRSLLEDISTPALIFQSAKDSLASPEVGQY-MAENIPNSQLELIQ 253 (282)
T ss_dssp HH------HHHHHHHHHHSCHHHHHHHHHHHHSCBCGGGGGGCCSCEEEEEEEECTTCCHHHHHH-HHHHSSSEEEEEEE
T ss_pred hh------HHHHHHHHhcCCcHHHHHHHHHHhcccHHHHHhcCCCCeEEEEeCCCCcCCHHHHHH-HHHhCCCCcEEEec
Confidence 00 00011110000 000001111222233446778899999999999999998875443 45567889999999
Q ss_pred CCCccccccccccCcccHHHHHHHHHHhhc
Q 008093 393 HGGHLAFFEGLTAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 393 ~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~ 422 (578)
++||+.+.+. +..+.+.|.+||++..
T Consensus 254 ~~gH~~~~~~----~~~~~~~i~~fl~~~~ 279 (282)
T 3qvm_A 254 AEGHCLHMTD----AGLITPLLIHFIQNNQ 279 (282)
T ss_dssp EESSCHHHHC----HHHHHHHHHHHHHHC-
T ss_pred CCCCcccccC----HHHHHHHHHHHHHhcC
Confidence 9999999883 3358899999998753
|
| >4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1.6e-22 Score=199.63 Aligned_cols=254 Identities=15% Similarity=0.155 Sum_probs=149.7
Q ss_pred CeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCC
Q 008093 119 SYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHR 198 (578)
Q Consensus 119 ~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~R 198 (578)
..++..++++|| ++.+.. . .+++|+||++||+++ +...| ..++..+.++||+|+++|+|
T Consensus 2 ~~~~~~~~~~~~-~~~~~~--~----------------~~~~~~vv~lHG~~~-~~~~~-~~~~~~l~~~g~~v~~~d~~ 60 (279)
T 4g9e_A 2 TINYHELETSHG-RIAVRE--S----------------EGEGAPLLMIHGNSS-SGAIF-APQLEGEIGKKWRVIAPDLP 60 (279)
T ss_dssp CCEEEEEEETTE-EEEEEE--C----------------CCCEEEEEEECCTTC-CGGGG-HHHHHSHHHHHEEEEEECCT
T ss_pred ceEEEEEEcCCc-eEEEEe--c----------------CCCCCeEEEECCCCC-chhHH-HHHHhHHHhcCCeEEeecCC
Confidence 346778888877 444321 1 134578999999965 44445 67888877789999999999
Q ss_pred CCCCCCCCCCC--CCC-CCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhh
Q 008093 199 GLGGVSITSDC--FYN-AGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIG 275 (578)
Q Consensus 199 G~G~S~~~~~~--~~~-~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~ 275 (578)
|||.|+..... .+. ..+.+|+.++++.+ +..+++++||||||.+++.++.++|+ +.++|+++++......
T Consensus 61 G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~lvG~S~Gg~~a~~~a~~~p~---~~~~vl~~~~~~~~~~ 133 (279)
T 4g9e_A 61 GHGKSTDAIDPDRSYSMEGYADAMTEVMQQL----GIADAVVFGWSLGGHIGIEMIARYPE---MRGLMITGTPPVAREE 133 (279)
T ss_dssp TSTTSCCCSCHHHHSSHHHHHHHHHHHHHHH----TCCCCEEEEETHHHHHHHHHTTTCTT---CCEEEEESCCCCCGGG
T ss_pred CCCCCCCCCCcccCCCHHHHHHHHHHHHHHh----CCCceEEEEECchHHHHHHHHhhCCc---ceeEEEecCCCCCCCc
Confidence 99999764211 111 22334555555544 45689999999999999999999987 7888888876543321
Q ss_pred hHH-Hhh----------HHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHH
Q 008093 276 DRF-IGR----------RLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYR 344 (578)
Q Consensus 276 ~~~-l~~----------~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~ 344 (578)
... ... ..........+ ..... ..... ............... .....+.
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~---~~~~~--~~~~~~~~~~~~~~~-----------~~~~~~~ 193 (279)
T 4g9e_A 134 VGQGFKSGPDMALAGQEIFSERDVESYA----RSTCG---EPFEA--SLLDIVARTDGRARR-----------IMFEKFG 193 (279)
T ss_dssp HHHHBCCSTTGGGGGCSCCCHHHHHHHH----HHHHC---SSCCH--HHHHHHHHSCHHHHH-----------HHHHHHH
T ss_pred cchhhccchhhhhcCcccccHHHHHHHH----Hhhcc---CcccH--HHHHHHHhhhccchH-----------HHHHHhh
Confidence 110 000 00000000000 00000 00000 000000000000000 0000111
Q ss_pred h---CCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 345 N---CSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 345 ~---~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
. ......+.++++|+|+|+|++|+++|.+..........++.++.+++++||+.+++. +..+.+.|.+||++.
T Consensus 194 ~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~----p~~~~~~i~~fl~~~ 269 (279)
T 4g9e_A 194 SGTGGNQRDIVAEAQLPIAVVNGRDEPFVELDFVSKVKFGNLWEGKTHVIDNAGHAPFREA----PAEFDAYLARFIRDC 269 (279)
T ss_dssp HTCBCCHHHHHHHCCSCEEEEEETTCSSBCHHHHTTCCCSSBGGGSCEEETTCCSCHHHHS----HHHHHHHHHHHHHHH
T ss_pred ccCCchHHHHHHhcCCCEEEEEcCCCcccchHHHHHHhhccCCCCeEEEECCCCcchHHhC----HHHHHHHHHHHHHHh
Confidence 1 112234667899999999999999997644332214556788999999999998883 346899999999986
Q ss_pred cCC
Q 008093 422 HSS 424 (578)
Q Consensus 422 ~~~ 424 (578)
.+.
T Consensus 270 ~~~ 272 (279)
T 4g9e_A 270 TQL 272 (279)
T ss_dssp HSS
T ss_pred hhh
Confidence 544
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1.7e-21 Score=196.39 Aligned_cols=236 Identities=14% Similarity=0.143 Sum_probs=139.4
Q ss_pred CcEEEEECCCCCCCcc--HHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCC-CCchHHHHHHHHHHHHHCCCCcEE
Q 008093 160 TPIAIVIPGLTSDSAA--SYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN-AGWTEDAREVIGYLHHEYPKAPLF 236 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~--~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~-~~~~~Dl~~~i~~l~~~~~~~~i~ 236 (578)
.|+|||+||+++++.. .| ..++..| ..||+|+++|+||||.|+......++ ..+.+|+.++++.+ +..+++
T Consensus 25 g~~vvllHG~~~~~~~~~~w-~~~~~~L-~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l----~~~~~~ 98 (282)
T 1iup_A 25 GQPVILIHGSGPGVSAYANW-RLTIPAL-SKFYRVIAPDMVGFGFTDRPENYNYSKDSWVDHIIGIMDAL----EIEKAH 98 (282)
T ss_dssp SSEEEEECCCCTTCCHHHHH-TTTHHHH-TTTSEEEEECCTTSTTSCCCTTCCCCHHHHHHHHHHHHHHT----TCCSEE
T ss_pred CCeEEEECCCCCCccHHHHH-HHHHHhh-ccCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCCceE
Confidence 3579999998654442 33 5566666 56899999999999999765322222 23445666666544 456899
Q ss_pred EEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHH-HHHHhHHHHHhhhcccccccCCHHH
Q 008093 237 AIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDR-ALTIGLQDYAQLHEPRYSRLANWEG 315 (578)
Q Consensus 237 lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~-~l~~~l~~~~~~~~~~l~~~~d~~~ 315 (578)
++||||||.+++.+|.++|+ +|+++|+++++............ .... .....+.......... ......+.
T Consensus 99 lvGhS~GG~ia~~~A~~~P~--~v~~lvl~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 170 (282)
T 1iup_A 99 IVGNAFGGGLAIATALRYSE--RVDRMVLMGAAGTRFDVTEGLNA-----VWGYTPSIENMRNLLDIFAYD-RSLVTDEL 170 (282)
T ss_dssp EEEETHHHHHHHHHHHHSGG--GEEEEEEESCCCSCCCCCHHHHH-----HHTCCSCHHHHHHHHHHHCSS-GGGCCHHH
T ss_pred EEEECHhHHHHHHHHHHChH--HHHHHHeeCCccCCCCCCHHHHH-----HhcCCCcHHHHHHHHHHhhcC-cccCCHHH
Confidence 99999999999999999998 89999999975432110000000 0000 0000000110000000 00000000
Q ss_pred Hh------ccCCH-HHHHhhhhhccCCCCCHHHHHHh-CCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEE
Q 008093 316 IK------KSRSI-RDFDSHATCLVGKFETVDTYYRN-CSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVV 387 (578)
Q Consensus 316 i~------~~~s~-~efd~~~~~~~~g~~~~~~yy~~-~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~ 387 (578)
+. ..... ..+... .... ...+... ......+.+|++|+|+|+|++|+++|.+.... ..+..++.+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~p~~~~~~-~~~~~~~~~ 243 (282)
T 1iup_A 171 ARLRYEASIQPGFQESFSSM----FPEP--RQRWIDALASSDEDIKTLPNETLIIHGREDQVVPLSSSLR-LGELIDRAQ 243 (282)
T ss_dssp HHHHHHHHTSTTHHHHHHHH----SCSS--THHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCHHHHHH-HHHHCTTEE
T ss_pred HHHHHhhccChHHHHHHHHH----Hhcc--ccccccccccchhhhhhcCCCEEEEecCCCCCCCHHHHHH-HHHhCCCCe
Confidence 00 00000 001100 0000 0111111 11125678999999999999999999765433 456678999
Q ss_pred EEEeCCCCccccccccccCcccHHHHHHHHHHh
Q 008093 388 LATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 388 l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
+.+++++||+.+.|. | ..+.+.|.+||++
T Consensus 244 ~~~i~~~gH~~~~e~--p--~~~~~~i~~fl~~ 272 (282)
T 1iup_A 244 LHVFGRCGHWTQIEQ--T--DRFNRLVVEFFNE 272 (282)
T ss_dssp EEEESSCCSCHHHHS--H--HHHHHHHHHHHHT
T ss_pred EEEECCCCCCccccC--H--HHHHHHHHHHHhc
Confidence 999999999999983 3 3589999999986
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A | Back alignment and structure |
|---|
Probab=99.87 E-value=8e-22 Score=199.84 Aligned_cols=238 Identities=13% Similarity=0.089 Sum_probs=138.4
Q ss_pred CcEEEEECCCC-C-CCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCC-CCchHHHHHHHHHHHHHCCCCcEE
Q 008093 160 TPIAIVIPGLT-S-DSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN-AGWTEDAREVIGYLHHEYPKAPLF 236 (578)
Q Consensus 160 ~PiVVllHGl~-G-~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~-~~~~~Dl~~~i~~l~~~~~~~~i~ 236 (578)
+|+|||+||++ | ++...| ..++..|.+. |+|+++|+||||.|+......++ ..+.+|+.++++.+ +..+++
T Consensus 36 ~~~vvllHG~~pg~~~~~~w-~~~~~~L~~~-~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l----~~~~~~ 109 (291)
T 2wue_A 36 DQTVVLLHGGGPGAASWTNF-SRNIAVLARH-FHVLAVDQPGYGHSDKRAEHGQFNRYAAMALKGLFDQL----GLGRVP 109 (291)
T ss_dssp SSEEEEECCCCTTCCHHHHT-TTTHHHHTTT-SEEEEECCTTSTTSCCCSCCSSHHHHHHHHHHHHHHHH----TCCSEE
T ss_pred CCcEEEECCCCCccchHHHH-HHHHHHHHhc-CEEEEECCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHh----CCCCeE
Confidence 35899999994 2 333344 5677777664 99999999999999765331222 23456666666655 345899
Q ss_pred EEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchh---hh--hHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccC
Q 008093 237 AIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL---IG--DRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLA 311 (578)
Q Consensus 237 lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~---~~--~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~ 311 (578)
++||||||.+++.+|.++|+ +|+++|+++++.... .. .... ... ...+.......+.......... ....
T Consensus 110 lvGhS~Gg~ia~~~A~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~ 184 (291)
T 2wue_A 110 LVGNALGGGTAVRFALDYPA--RAGRLVLMGPGGLSINLFAPDPTEGV-KRL-SKFSVAPTRENLEAFLRVMVYD-KNLI 184 (291)
T ss_dssp EEEETHHHHHHHHHHHHSTT--TEEEEEEESCSSSCCCSSSCSSCHHH-HHH-HHHHHSCCHHHHHHHHHTSCSS-GGGS
T ss_pred EEEEChhHHHHHHHHHhChH--hhcEEEEECCCCCCccccccccchhh-HHH-HHHhccCCHHHHHHHHHHhccC-cccC
Confidence 99999999999999999998 899999999754211 00 0000 000 0000000000111111100000 0000
Q ss_pred CHHHHhccCCHHHHHhhhhhccCCCCCHHHH---HHh---CCcc--cccCCCccceEEEEeCCCCCCCCCCcchHHHhcC
Q 008093 312 NWEGIKKSRSIRDFDSHATCLVGKFETVDTY---YRN---CSSS--TYVGNVSIPLLCISSLDDPVCTVEAIPWDECRAN 383 (578)
Q Consensus 312 d~~~i~~~~s~~efd~~~~~~~~g~~~~~~y---y~~---~s~~--~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~ 383 (578)
..+.+. ........+ ..+...... +.. .... ..+.+|++|+|+|+|++|+++|.+.... ..+..
T Consensus 185 ~~~~~~------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~-~~~~~ 256 (291)
T 2wue_A 185 TPELVD------QRFALASTP-ESLTATRAMGKSFAGADFEAGMMWREVYRLRQPVLLIWGREDRVNPLDGALV-ALKTI 256 (291)
T ss_dssp CHHHHH------HHHHHHTSH-HHHHHHHHHHHHHTSTTGGGGCGGGTGGGCCSCEEEEEETTCSSSCGGGGHH-HHHHS
T ss_pred CHHHHH------HHHHHhcCc-hHHHHHHHHHhhccccccccchhHHHHhhCCCCeEEEecCCCCCCCHHHHHH-HHHHC
Confidence 000000 000000000 000000000 000 0011 4678899999999999999999875543 45667
Q ss_pred CCEEEEEeCCCCccccccccccCcccHHHHHHHHHHh
Q 008093 384 KNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 384 ~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
++.++++++++||+.++|. | ..+.+.|.+||+.
T Consensus 257 p~~~~~~i~~~gH~~~~e~--p--~~~~~~i~~fl~~ 289 (291)
T 2wue_A 257 PRAQLHVFGQCGHWVQVEK--F--DEFNKLTIEFLGG 289 (291)
T ss_dssp TTEEEEEESSCCSCHHHHT--H--HHHHHHHHHHTTC
T ss_pred CCCeEEEeCCCCCChhhhC--H--HHHHHHHHHHHhc
Confidence 8999999999999999983 3 3588999999864
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A | Back alignment and structure |
|---|
Probab=99.87 E-value=9.3e-22 Score=197.27 Aligned_cols=259 Identities=12% Similarity=0.066 Sum_probs=148.9
Q ss_pred eeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCC
Q 008093 120 YRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRG 199 (578)
Q Consensus 120 y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG 199 (578)
++...++ .||..+.+.... ++|+||++||++++ ...| ..++..|.+. |+|+++|+||
T Consensus 10 ~~~~~~~-~~g~~l~~~~~g-------------------~~~~vv~lHG~~~~-~~~~-~~~~~~L~~~-~~vi~~D~~G 66 (301)
T 3kda_A 10 FESAYRE-VDGVKLHYVKGG-------------------QGPLVMLVHGFGQT-WYEW-HQLMPELAKR-FTVIAPDLPG 66 (301)
T ss_dssp CEEEEEE-ETTEEEEEEEEE-------------------SSSEEEEECCTTCC-GGGG-TTTHHHHTTT-SEEEEECCTT
T ss_pred cceEEEe-eCCeEEEEEEcC-------------------CCCEEEEECCCCcc-hhHH-HHHHHHHHhc-CeEEEEcCCC
Confidence 4444444 488888765331 34689999999654 4445 6788888887 9999999999
Q ss_pred CCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCc-EEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhH-
Q 008093 200 LGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAP-LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDR- 277 (578)
Q Consensus 200 ~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~-i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~- 277 (578)
||.|...........+.+|+.++++++. ..+ ++++||||||.+++.++.++|+ +|+++|+++++........
T Consensus 67 ~G~S~~~~~~~~~~~~~~~l~~~l~~l~----~~~p~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~ 140 (301)
T 3kda_A 67 LGQSEPPKTGYSGEQVAVYLHKLARQFS----PDRPFDLVAHDIGIWNTYPMVVKNQA--DIARLVYMEAPIPDARIYRF 140 (301)
T ss_dssp STTCCCCSSCSSHHHHHHHHHHHHHHHC----SSSCEEEEEETHHHHTTHHHHHHCGG--GEEEEEEESSCCSSGGGGGS
T ss_pred CCCCCCCCCCccHHHHHHHHHHHHHHcC----CCccEEEEEeCccHHHHHHHHHhChh--hccEEEEEccCCCCCCccch
Confidence 9999765322222344566666666653 335 9999999999999999999998 8999999998642211100
Q ss_pred -----------H----Hh--hHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHH
Q 008093 278 -----------F----IG--RRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVD 340 (578)
Q Consensus 278 -----------~----l~--~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~ 340 (578)
+ .. ......+........+.......... ......+.+ ..+...+... .......
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~~~-~~~~~~~ 212 (301)
T 3kda_A 141 PAFTAQGESLVWHFSFFAADDRLAETLIAGKERFFLEHFIKSHASN-TEVFSERLL------DLYARSYAKP-HSLNASF 212 (301)
T ss_dssp BSEETTEECSSTHHHHHHCSTTHHHHHHTTCHHHHHHHHHHHTCSS-GGGSCHHHH------HHHHHHHTSH-HHHHHHH
T ss_pred hhhcchhhhhhhhHHHhhcCcchHHHHhccchHHHHHHHHHhccCC-cccCCHHHH------HHHHHHhccc-cccchHH
Confidence 0 00 00000000000000001111100000 000000000 0000000000 0000011
Q ss_pred HHHHh--------CCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHH
Q 008093 341 TYYRN--------CSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVR 412 (578)
Q Consensus 341 ~yy~~--------~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~ 412 (578)
.+++. ......+.++++|+|+|+|++| ++.+... ......+++++.+++++||+.++|. +..+.+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D--~~~~~~~-~~~~~~~~~~~~~i~~~gH~~~~e~----p~~~~~ 285 (301)
T 3kda_A 213 EYYRALNESVRQNAELAKTRLQMPTMTLAGGGAGG--MGTFQLE-QMKAYAEDVEGHVLPGCGHWLPEEC----AAPMNR 285 (301)
T ss_dssp HHHHTHHHHHHHHHHHTTSCBCSCEEEEEECSTTS--CTTHHHH-HHHTTBSSEEEEEETTCCSCHHHHT----HHHHHH
T ss_pred HHHHhhccchhhcccchhhccccCcceEEEecCCC--CChhHHH-HHHhhcccCeEEEcCCCCcCchhhC----HHHHHH
Confidence 11111 0112344589999999999999 4444332 3456678999999999999999983 336889
Q ss_pred HHHHHHHhhc
Q 008093 413 AVNEYLGVLH 422 (578)
Q Consensus 413 ~v~eFL~~~~ 422 (578)
.|.+|+++..
T Consensus 286 ~i~~~l~~~~ 295 (301)
T 3kda_A 286 LVIDFLSRGR 295 (301)
T ss_dssp HHHHHHTTSC
T ss_pred HHHHHHhhCc
Confidence 9999988743
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.2e-21 Score=198.54 Aligned_cols=238 Identities=15% Similarity=0.141 Sum_probs=134.8
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCC----CCC-CCchHHHHHHHHHHHHHCCCCc
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDC----FYN-AGWTEDAREVIGYLHHEYPKAP 234 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~----~~~-~~~~~Dl~~~i~~l~~~~~~~~ 234 (578)
+|+|||+||++++ ...| +.++..|.+. |+|+++|+||||.|+.. .. .|+ ..+.+|+.++++.+ +..+
T Consensus 29 g~~lvllHG~~~~-~~~w-~~~~~~L~~~-~~via~Dl~G~G~S~~~-~~~~~~~~~~~~~a~dl~~ll~~l----~~~~ 100 (294)
T 1ehy_A 29 GPTLLLLHGWPGF-WWEW-SKVIGPLAEH-YDVIVPDLRGFGDSEKP-DLNDLSKYSLDKAADDQAALLDAL----GIEK 100 (294)
T ss_dssp SSEEEEECCSSCC-GGGG-HHHHHHHHTT-SEEEEECCTTSTTSCCC-CTTCGGGGCHHHHHHHHHHHHHHT----TCCC
T ss_pred CCEEEEECCCCcc-hhhH-HHHHHHHhhc-CEEEecCCCCCCCCCCC-ccccccCcCHHHHHHHHHHHHHHc----CCCC
Confidence 4679999999654 4455 6788888775 99999999999999764 21 232 23445666666554 4568
Q ss_pred EEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhh----HHHHHH----HHHHHHHhH----HHHHhh
Q 008093 235 LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGR----RLIQKI----YDRALTIGL----QDYAQL 302 (578)
Q Consensus 235 i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~----~~~~~~----~~~~l~~~l----~~~~~~ 302 (578)
++++||||||.+++.+|..+|+ +|+++|+++++............ .+...+ ....+.... ..+...
T Consensus 101 ~~lvGhS~Gg~va~~~A~~~P~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (294)
T 1ehy_A 101 AYVVGHDFAAIVLHKFIRKYSD--RVIKAAIFDPIQPDFGPVYFGLGHVHESWYSQFHQLDMAVEVVGSSREVCKKYFKH 178 (294)
T ss_dssp EEEEEETHHHHHHHHHHHHTGG--GEEEEEEECCSCTTC-----------CCHHHHHTTCHHHHHHHTSCHHHHHHHHHH
T ss_pred EEEEEeChhHHHHHHHHHhChh--heeEEEEecCCCCCcchhhccchhccCceEEEecCcchhHHHhccchhHHHHHHHH
Confidence 9999999999999999999999 89999999974321110000000 000000 000000000 000000
Q ss_pred hccccc---ccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhC--Ccc-----cccCCCccceEEEEeCCCCCCCC
Q 008093 303 HEPRYS---RLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNC--SSS-----TYVGNVSIPLLCISSLDDPVCTV 372 (578)
Q Consensus 303 ~~~~l~---~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~--s~~-----~~l~~I~vPvLiI~g~dDpivp~ 372 (578)
...... ...+.+. ...+...+.. .........+++.. ... ..+.+|++|+|+|+|++|+++|.
T Consensus 179 ~~~~~~~~~~~~~~~~------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~~~ 251 (294)
T 1ehy_A 179 FFDHWSYRDELLTEEE------LEVHVDNCMK-PDNIHGGFNYYRANIRPDAALWTDLDHTMSDLPVTMIWGLGDTCVPY 251 (294)
T ss_dssp HHHHTSSSSCCSCHHH------HHHHHHHHTS-TTHHHHHHHHHHHHSSSSCCCCCTGGGSCBCSCEEEEEECCSSCCTT
T ss_pred HhhcccCCCCCCCHHH------HHHHHHHhcC-CcccchHHHHHHHHHhhhhhhcCCcccCcCCCCEEEEEeCCCCCcch
Confidence 000000 0000000 0001110000 00000011222211 111 13458999999999999999884
Q ss_pred CCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHH
Q 008093 373 EAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYL 418 (578)
Q Consensus 373 ~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL 418 (578)
...........++.++.+++++||+.++|. | ..+.+.|.+||
T Consensus 252 ~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~--p--~~~~~~i~~fl 293 (294)
T 1ehy_A 252 APLIEFVPKYYSNYTMETIEDCGHFLMVEK--P--EIAIDRIKTAF 293 (294)
T ss_dssp HHHHHHHHHHBSSEEEEEETTCCSCHHHHC--H--HHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCCceEEeCCCCCChhhhC--H--HHHHHHHHHHh
Confidence 211223445578999999999999999983 3 35888998886
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=99.87 E-value=7.5e-21 Score=180.36 Aligned_cols=197 Identities=16% Similarity=0.176 Sum_probs=147.6
Q ss_pred eEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHH--HHHHHHhCCceEEEEeCC
Q 008093 121 RRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRH--LVFNTAKRGWNVVVSNHR 198 (578)
Q Consensus 121 ~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~--l~~~l~~~Gy~Vvv~D~R 198 (578)
+...++ .||.++...++.+. .++|+||++||+++ +...| .. ++..+.++||+|+++|+|
T Consensus 5 ~~~~~~-~~g~~l~~~~~~~~----------------~~~~~vv~~hG~~~-~~~~~-~~~~~~~~l~~~G~~v~~~d~~ 65 (207)
T 3bdi_A 5 QEEFID-VNGTRVFQRKMVTD----------------SNRRSIALFHGYSF-TSMDW-DKADLFNNYSKIGYNVYAPDYP 65 (207)
T ss_dssp EEEEEE-ETTEEEEEEEECCT----------------TCCEEEEEECCTTC-CGGGG-GGGTHHHHHHTTTEEEEEECCT
T ss_pred eeEEEe-eCCcEEEEEEEecc----------------CCCCeEEEECCCCC-Ccccc-chHHHHHHHHhCCCeEEEEcCC
Confidence 444444 48888988777652 25689999999965 44445 66 889999999999999999
Q ss_pred CCCCC---CCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhh
Q 008093 199 GLGGV---SITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIG 275 (578)
Q Consensus 199 G~G~S---~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~ 275 (578)
|+|.+ ..... . ....+|+.+.+..+.+..+..+++++|||+||.+++.++..+++ +++++++++++.....
T Consensus 66 g~g~s~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~--~~~~~v~~~~~~~~~~- 139 (207)
T 3bdi_A 66 GFGRSASSEKYGI-D--RGDLKHAAEFIRDYLKANGVARSVIMGASMGGGMVIMTTLQYPD--IVDGIIAVAPAWVESL- 139 (207)
T ss_dssp TSTTSCCCTTTCC-T--TCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGG--GEEEEEEESCCSCGGG-
T ss_pred cccccCcccCCCC-C--cchHHHHHHHHHHHHHHcCCCceEEEEECccHHHHHHHHHhCch--hheEEEEeCCccccch-
Confidence 99998 43321 1 11346666666666666666799999999999999999999887 7999999987632100
Q ss_pred hHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCC
Q 008093 276 DRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNV 355 (578)
Q Consensus 276 ~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I 355 (578)
...+.++
T Consensus 140 -------------------------------------------------------------------------~~~~~~~ 146 (207)
T 3bdi_A 140 -------------------------------------------------------------------------KGDMKKI 146 (207)
T ss_dssp -------------------------------------------------------------------------HHHHTTC
T ss_pred -------------------------------------------------------------------------hHHHhhc
Confidence 1234567
Q ss_pred ccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHh
Q 008093 356 SIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 356 ~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
++|+++++|++|++++.+.... .....++.++.+++++||..+.+. ...+.+.+.+||++
T Consensus 147 ~~p~l~i~g~~D~~~~~~~~~~-~~~~~~~~~~~~~~~~~H~~~~~~----~~~~~~~i~~fl~~ 206 (207)
T 3bdi_A 147 RQKTLLVWGSKDHVVPIALSKE-YASIISGSRLEIVEGSGHPVYIEK----PEEFVRITVDFLRN 206 (207)
T ss_dssp CSCEEEEEETTCTTTTHHHHHH-HHHHSTTCEEEEETTCCSCHHHHS----HHHHHHHHHHHHHT
T ss_pred cCCEEEEEECCCCccchHHHHH-HHHhcCCceEEEeCCCCCCccccC----HHHHHHHHHHHHhh
Confidence 8999999999999999765443 334457889999999999988773 23578889999875
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.9e-21 Score=199.34 Aligned_cols=251 Identities=15% Similarity=0.133 Sum_probs=142.5
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCC--C-CCCCC-CCchHHHHHHHHHHHHHCCCCcE
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSIT--S-DCFYN-AGWTEDAREVIGYLHHEYPKAPL 235 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~--~-~~~~~-~~~~~Dl~~~i~~l~~~~~~~~i 235 (578)
+|+|||+||+++ +...| ..++..|.+.||+|+++|+||||.|+.. . ...|. ..+.+|+.++++.+.. ...++
T Consensus 31 g~~vvllHG~~~-~~~~w-~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~--~~~~~ 106 (328)
T 2cjp_A 31 GPTILFIHGFPE-LWYSW-RHQMVYLAERGYRAVAPDLRGYGDTTGAPLNDPSKFSILHLVGDVVALLEAIAP--NEEKV 106 (328)
T ss_dssp SSEEEEECCTTC-CGGGG-HHHHHHHHTTTCEEEEECCTTSTTCBCCCTTCGGGGSHHHHHHHHHHHHHHHCT--TCSSE
T ss_pred CCEEEEECCCCC-chHHH-HHHHHHHHHCCcEEEEECCCCCCCCCCcCcCCcccccHHHHHHHHHHHHHHhcC--CCCCe
Confidence 468999999965 44456 6788889888999999999999999754 2 12222 3445777777777641 14589
Q ss_pred EEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchh----hhhHHHhhH-----HH---------HHHHHH-HHHHhH
Q 008093 236 FAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL----IGDRFIGRR-----LI---------QKIYDR-ALTIGL 296 (578)
Q Consensus 236 ~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~----~~~~~l~~~-----~~---------~~~~~~-~l~~~l 296 (578)
+++||||||.+++.+|.++|+ +|+++|++++++... .....+... .. ...+.. .....+
T Consensus 107 ~lvGhS~Gg~ia~~~A~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (328)
T 2cjp_A 107 FVVAHDWGALIAWHLCLFRPD--KVKALVNLSVHFSKRNPKMNVVEGLKAIYGEDHYISRFQVPGEIEAEFAPIGAKSVL 184 (328)
T ss_dssp EEEEETHHHHHHHHHHHHCGG--GEEEEEEESCCCCCCCSSCCHHHHHHHHHCTTBHHHHTSSTTHHHHHHHHHCHHHHH
T ss_pred EEEEECHHHHHHHHHHHhChh--heeEEEEEccCCCcccccCChHHHHHhhcccchHHHhhhCCCcHHHHhhccCHHHHH
Confidence 999999999999999999998 899999999764311 000000000 00 000000 000011
Q ss_pred HHHHhhhccc--c-cccCCH-HH------HhccCCHHHHHhhhhh-ccCCCCCHHHHHHhCC------cccccCCCccce
Q 008093 297 QDYAQLHEPR--Y-SRLANW-EG------IKKSRSIRDFDSHATC-LVGKFETVDTYYRNCS------SSTYVGNVSIPL 359 (578)
Q Consensus 297 ~~~~~~~~~~--l-~~~~d~-~~------i~~~~s~~efd~~~~~-~~~g~~~~~~yy~~~s------~~~~l~~I~vPv 359 (578)
........+. . .....+ .. ........+.+..... ...++.....+|+... ....+.+|++|+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~ 264 (328)
T 2cjp_A 185 KKILTYRDPAPFYFPKGKGLEAIPDAPVALSSWLSEEELDYYANKFEQTGFTGAVNYYRALPINWELTAPWTGAQVKVPT 264 (328)
T ss_dssp HHHHTCCCSSCCBCCTTCTTTTSCCCCGGGGTTSCHHHHHHHHHHHHHHCSHHHHHHHHTHHHHHHHTGGGTTCCCCSCE
T ss_pred HHHhcccCCCcccccccchhhhcccccccCcCCCCHHHHHHHHHHhcccCCcchHHHHHhcccchhhhhhccCCccCCCE
Confidence 1111000000 0 000000 00 0000000011000000 0011111111221100 011467899999
Q ss_pred EEEEeCCCCCCCCCCcc-----hHHHhcCCCE-EEEEeCCCCccccccccccCcccHHHHHHHHHHh
Q 008093 360 LCISSLDDPVCTVEAIP-----WDECRANKNV-VLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 360 LiI~g~dDpivp~~~~~-----~~~~~~~~~~-~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
|+|+|++|+++|.+... .......++. ++.+++++||+.++|. | ..+.+.|.+||++
T Consensus 265 lii~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~gH~~~~e~--p--~~~~~~i~~fl~~ 327 (328)
T 2cjp_A 265 KFIVGEFDLVYHIPGAKEYIHNGGFKKDVPLLEEVVVLEGAAHFVSQER--P--HEISKHIYDFIQK 327 (328)
T ss_dssp EEEEETTCGGGGSTTHHHHHHHSHHHHHSTTBCCCEEETTCCSCHHHHS--H--HHHHHHHHHHHTT
T ss_pred EEEEeCCcccccCcchhhhhhhhhHHHHhcCCeeEEEcCCCCCCcchhC--H--HHHHHHHHHHHHh
Confidence 99999999999875311 2234557888 7999999999999983 3 3689999999864
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=3.8e-22 Score=204.83 Aligned_cols=245 Identities=12% Similarity=0.075 Sum_probs=137.9
Q ss_pred cEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCC-CCchHHHHHHHHHHHHHCCCCcEEEEE
Q 008093 161 PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN-AGWTEDAREVIGYLHHEYPKAPLFAIG 239 (578)
Q Consensus 161 PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~-~~~~~Dl~~~i~~l~~~~~~~~i~lvG 239 (578)
|+|||+||+++ +...| +.++..|.+ +|+|+++|+||||.|+... ..|+ ..+.+|+.++++.+ +..++++||
T Consensus 30 ~pvvllHG~~~-~~~~w-~~~~~~L~~-~~~via~Dl~G~G~S~~~~-~~~~~~~~a~dl~~ll~~l----~~~~~~lvG 101 (316)
T 3afi_E 30 PVVLFLHGNPT-SSHIW-RNILPLVSP-VAHCIAPDLIGFGQSGKPD-IAYRFFDHVRYLDAFIEQR----GVTSAYLVA 101 (316)
T ss_dssp CEEEEECCTTC-CGGGG-TTTHHHHTT-TSEEEEECCTTSTTSCCCS-SCCCHHHHHHHHHHHHHHT----TCCSEEEEE
T ss_pred CeEEEECCCCC-chHHH-HHHHHHHhh-CCEEEEECCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHc----CCCCEEEEE
Confidence 47999999965 44455 677888865 5999999999999997542 2222 23445666666554 456899999
Q ss_pred EchHHHHHHHHHhhcCCCCCccEEEEEcCCcc--hhhh-h------HHHhhHHHHHHHHHHH----HHhHH----HHHhh
Q 008093 240 TSIGANILVKYLGEEGEKTPVAGAAAICSPWD--LLIG-D------RFIGRRLIQKIYDRAL----TIGLQ----DYAQL 302 (578)
Q Consensus 240 hSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d--~~~~-~------~~l~~~~~~~~~~~~l----~~~l~----~~~~~ 302 (578)
|||||.+++.+|.++|+ +|+++|++++... .... . ...........+.... ...+. .+...
T Consensus 102 hS~Gg~va~~~A~~~P~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (316)
T 3afi_E 102 QDWGTALAFHLAARRPD--FVRGLAFMEFIRPMPTWQDFHHTEVAEEQDHAEAARAVFRKFRTPGEGEAMILEANAFVER 179 (316)
T ss_dssp EEHHHHHHHHHHHHCTT--TEEEEEEEEECCCBSSGGGTTCCCCGGGHHHHHHHHHHHHHHTSTTHHHHHHTTSCHHHHT
T ss_pred eCccHHHHHHHHHHCHH--hhhheeeeccCCCcchhhhccchhhccccccchhHHHHHHHhcCCchhhHHHhccchHHHH
Confidence 99999999999999999 8999999986221 1000 0 0000000000000000 00000 00000
Q ss_pred hccc-ccccCCHHHHhc---c----CCHHHHHhhhhhc-cCCCC-CHHHHHHhCCcccccCCCccceEEEEeCCCCCCCC
Q 008093 303 HEPR-YSRLANWEGIKK---S----RSIRDFDSHATCL-VGKFE-TVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTV 372 (578)
Q Consensus 303 ~~~~-l~~~~d~~~i~~---~----~s~~efd~~~~~~-~~g~~-~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~ 372 (578)
..+. .......+.+.. . .....+....... ..+.. ...+... .....+.+|++|+|+|+|++|+++|.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~i~~P~Lvi~G~~D~~~~~ 257 (316)
T 3afi_E 180 VLPGGIVRKLGDEEMAPYRTPFPTPESRRPVLAFPRELPIAGEPADVYEALQ--SAHAALAASSYPKLLFTGEPGALVSP 257 (316)
T ss_dssp TTGGGCSSCCCHHHHHHHHTTCCSTGGGHHHHHTGGGSCBTTBSHHHHHHHH--HHHHHHHHCCSCEEEEEEEECSSSCH
T ss_pred hcccccCCCCCHHHHHHHHhhcCCccchhHHHHHHHhccccccchhhhhHHH--HHHHhhhccCCCeEEEecCCCCccCH
Confidence 0000 000000000000 0 0000000000000 00000 0000000 01134567899999999999999987
Q ss_pred CCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhc
Q 008093 373 EAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 373 ~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~ 422 (578)
+.... ..+..++.++.+++++||+.++|. | ..+.+.|.+||+...
T Consensus 258 ~~~~~-~~~~~p~~~~~~i~~~GH~~~~e~--p--~~~~~~i~~fl~~~~ 302 (316)
T 3afi_E 258 EFAER-FAASLTRCALIRLGAGLHYLQEDH--A--DAIGRSVAGWIAGIE 302 (316)
T ss_dssp HHHHH-HHHHSSSEEEEEEEEECSCHHHHH--H--HHHHHHHHHHHHHHH
T ss_pred HHHHH-HHHhCCCCeEEEcCCCCCCchhhC--H--HHHHHHHHHHHhhcC
Confidence 64433 456678999999999999999983 3 359999999998754
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.4e-21 Score=189.91 Aligned_cols=130 Identities=18% Similarity=0.240 Sum_probs=96.0
Q ss_pred eeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCC
Q 008093 120 YRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRG 199 (578)
Q Consensus 120 y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG 199 (578)
++++.++ .||..+.+....+ +++|+||++||++++ ...| ..++..|.++||+|+++|+||
T Consensus 4 ~~~~~~~-~~g~~l~~~~~g~-----------------~~~~~vv~~hG~~~~-~~~~-~~~~~~l~~~G~~v~~~d~~G 63 (286)
T 3qit_A 4 MEEKFLE-FGGNQICLCSWGS-----------------PEHPVVLCIHGILEQ-GLAW-QEVALPLAAQGYRVVAPDLFG 63 (286)
T ss_dssp CEEEEEE-ETTEEEEEEEESC-----------------TTSCEEEEECCTTCC-GGGG-HHHHHHHHHTTCEEEEECCTT
T ss_pred hhhheee-cCCceEEEeecCC-----------------CCCCEEEEECCCCcc-cchH-HHHHHHhhhcCeEEEEECCCC
Confidence 3445444 5788888776542 346789999999654 4445 688999999999999999999
Q ss_pred CCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchh
Q 008093 200 LGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL 273 (578)
Q Consensus 200 ~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~ 273 (578)
+|.|....... . ...+|..+.+..+.+..+..+++++||||||.+++.++.++|+ +|+++|+++++....
T Consensus 64 ~G~s~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--~v~~lvl~~~~~~~~ 133 (286)
T 3qit_A 64 HGRSSHLEMVT-S-YSSLTFLAQIDRVIQELPDQPLLLVGHSMGAMLATAIASVRPK--KIKELILVELPLPAE 133 (286)
T ss_dssp STTSCCCSSGG-G-CSHHHHHHHHHHHHHHSCSSCEEEEEETHHHHHHHHHHHHCGG--GEEEEEEESCCCCCC
T ss_pred CCCCCCCCCCC-C-cCHHHHHHHHHHHHHhcCCCCEEEEEeCHHHHHHHHHHHhChh--hccEEEEecCCCCCc
Confidence 99997654111 1 1123444444444445566799999999999999999999988 899999999876543
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.3e-21 Score=191.67 Aligned_cols=242 Identities=10% Similarity=-0.025 Sum_probs=138.8
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEE
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIG 239 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG 239 (578)
.|+||++||++++ ...| ..++..|.++||+|+++|+||||.|+......+ ...+.+.++.+.+.......+++++|
T Consensus 4 g~~vv~lHG~~~~-~~~~-~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~--~~~~~~~~l~~~l~~l~~~~~~~lvG 79 (258)
T 3dqz_A 4 KHHFVLVHNAYHG-AWIW-YKLKPLLESAGHRVTAVELAASGIDPRPIQAVE--TVDEYSKPLIETLKSLPENEEVILVG 79 (258)
T ss_dssp CCEEEEECCTTCC-GGGG-TTHHHHHHHTTCEEEEECCTTSTTCSSCGGGCC--SHHHHHHHHHHHHHTSCTTCCEEEEE
T ss_pred CCcEEEECCCCCc-cccH-HHHHHHHHhCCCEEEEecCCCCcCCCCCCCccc--cHHHhHHHHHHHHHHhcccCceEEEE
Confidence 3789999999654 4445 688899999999999999999999976433222 22233333333333322237999999
Q ss_pred EchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcc--------cccccC
Q 008093 240 TSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEP--------RYSRLA 311 (578)
Q Consensus 240 hSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~--------~l~~~~ 311 (578)
|||||.+++.++.++|+ +|+++|+++++......... . .... +............. ......
T Consensus 80 hS~Gg~~a~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~---~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (258)
T 3dqz_A 80 FSFGGINIALAADIFPA--KIKVLVFLNAFLPDTTHVPS---H----VLDK-YMEMPGGLGDCEFSSHETRNGTMSLLKM 149 (258)
T ss_dssp ETTHHHHHHHHHTTCGG--GEEEEEEESCCCCCSSSCTT---H----HHHH-HHTSTTCCTTCEEEEEEETTEEEEEEEC
T ss_pred eChhHHHHHHHHHhChH--hhcEEEEecCCCCCCCCcch---H----HHHH-hcccchhhhhcccchhhhhccChhhhhh
Confidence 99999999999999998 89999999985432211100 0 0000 00000000000000 000000
Q ss_pred CHHHH----hccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEE
Q 008093 312 NWEGI----KKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVV 387 (578)
Q Consensus 312 d~~~i----~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~ 387 (578)
..... .......+... ..............+............++|+|+|+|++|+++|.+.... ..+..++.+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~-~~~~~~~~~ 227 (258)
T 3dqz_A 150 GPKFMKARLYQNCPIEDYEL-AKMLHRQGSFFTEDLSKKEKFSEEGYGSVQRVYVMSSEDKAIPCDFIRW-MIDNFNVSK 227 (258)
T ss_dssp CHHHHHHHTSTTSCHHHHHH-HHHHCCCEECCHHHHHTSCCCCTTTGGGSCEEEEEETTCSSSCHHHHHH-HHHHSCCSC
T ss_pred hHHHHHHHhhccCCHHHHHH-HHHhccCCchhhhhhhccccccccccccCCEEEEECCCCeeeCHHHHHH-HHHhCCccc
Confidence 00000 00000000000 0000000001111122222223333347999999999999999875543 455667889
Q ss_pred EEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 388 LATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 388 l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
+.+++++||+.++|. | ..+.+.|.+|+++.
T Consensus 228 ~~~~~~~gH~~~~~~--p--~~~~~~i~~fl~~~ 257 (258)
T 3dqz_A 228 VYEIDGGDHMVMLSK--P--QKLFDSLSAIATDY 257 (258)
T ss_dssp EEEETTCCSCHHHHS--H--HHHHHHHHHHHHHT
T ss_pred EEEcCCCCCchhhcC--h--HHHHHHHHHHHHHh
Confidence 999999999999983 3 35889999999864
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=99.87 E-value=4.8e-21 Score=192.42 Aligned_cols=239 Identities=15% Similarity=0.139 Sum_probs=137.1
Q ss_pred CcEEEEECCCCC--CCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCC-CCc----hHHHHHHHHHHHHHCCC
Q 008093 160 TPIAIVIPGLTS--DSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN-AGW----TEDAREVIGYLHHEYPK 232 (578)
Q Consensus 160 ~PiVVllHGl~G--~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~-~~~----~~Dl~~~i~~l~~~~~~ 232 (578)
.|+||++||+++ ++...| ..++..|.+ +|+|+++|+||||.|+......+. ..+ .+|+.++++.+ +.
T Consensus 29 ~p~vvllHG~~~~~~~~~~~-~~~~~~L~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~dl~~~l~~l----~~ 102 (285)
T 1c4x_A 29 SPAVVLLHGAGPGAHAASNW-RPIIPDLAE-NFFVVAPDLIGFGQSEYPETYPGHIMSWVGMRVEQILGLMNHF----GI 102 (285)
T ss_dssp SCEEEEECCCSTTCCHHHHH-GGGHHHHHT-TSEEEEECCTTSTTSCCCSSCCSSHHHHHHHHHHHHHHHHHHH----TC
T ss_pred CCEEEEEeCCCCCCcchhhH-HHHHHHHhh-CcEEEEecCCCCCCCCCCCCcccchhhhhhhHHHHHHHHHHHh----CC
Confidence 466999999952 333344 667777766 499999999999999754331222 234 45555555544 34
Q ss_pred CcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhh-hHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccC
Q 008093 233 APLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIG-DRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLA 311 (578)
Q Consensus 233 ~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~-~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~ 311 (578)
.+++++||||||.+++.+|.++|+ +|+++|+++++...... ..... .. ...+.......+.......... ....
T Consensus 103 ~~~~lvGhS~Gg~va~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~ 177 (285)
T 1c4x_A 103 EKSHIVGNSMGGAVTLQLVVEAPE--RFDKVALMGSVGAPMNARPPELA-RL-LAFYADPRLTPYRELIHSFVYD-PENF 177 (285)
T ss_dssp SSEEEEEETHHHHHHHHHHHHCGG--GEEEEEEESCCSSCCSSCCHHHH-HH-HTGGGSCCHHHHHHHHHTTSSC-STTC
T ss_pred CccEEEEEChHHHHHHHHHHhChH--HhheEEEeccCCCCCCccchhHH-HH-HHHhccccHHHHHHHHHHhhcC-cccc
Confidence 689999999999999999999998 89999999875421110 00000 00 0000000000011111100000 0000
Q ss_pred -CHHHHhcc-----CC---HHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhc
Q 008093 312 -NWEGIKKS-----RS---IRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRA 382 (578)
Q Consensus 312 -d~~~i~~~-----~s---~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~ 382 (578)
..+..... .. ...+...+ .+...+.. ........+.+|++|+|+|+|++|+++|.+.... ..+.
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-----~~~~~~~~l~~i~~P~lii~G~~D~~~p~~~~~~-~~~~ 250 (285)
T 1c4x_A 178 PGMEEIVKSRFEVANDPEVRRIQEVMF-ESMKAGME-----SLVIPPATLGRLPHDVLVFHGRQDRIVPLDTSLY-LTKH 250 (285)
T ss_dssp TTHHHHHHHHHHHHHCHHHHHHHHHHH-HHHSSCCG-----GGCCCHHHHTTCCSCEEEEEETTCSSSCTHHHHH-HHHH
T ss_pred cCcHHHHHHHHHhccCHHHHHHHHHHh-cccccccc-----ccccchhhhccCCCCEEEEEeCCCeeeCHHHHHH-HHHh
Confidence 00000000 00 00000000 00000000 0011224578899999999999999999875543 4566
Q ss_pred CCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHh
Q 008093 383 NKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 383 ~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
.++.++.+++++||+.++|. | ..+.+.|.+||++
T Consensus 251 ~~~~~~~~i~~~gH~~~~e~--p--~~~~~~i~~fl~~ 284 (285)
T 1c4x_A 251 LKHAELVVLDRCGHWAQLER--W--DAMGPMLMEHFRA 284 (285)
T ss_dssp CSSEEEEEESSCCSCHHHHS--H--HHHHHHHHHHHHC
T ss_pred CCCceEEEeCCCCcchhhcC--H--HHHHHHHHHHHhc
Confidence 78999999999999999983 3 3588999999864
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=99.87 E-value=9e-22 Score=188.76 Aligned_cols=207 Identities=14% Similarity=-0.003 Sum_probs=152.8
Q ss_pred CCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeC
Q 008093 118 FSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 197 (578)
Q Consensus 118 ~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~ 197 (578)
+..+...++. ||.++...++.+. ...|+||++||++++...+....++..+.++||.|+++|+
T Consensus 10 ~~~~~~~~~~-~g~~l~~~~~~p~----------------~~~p~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 72 (223)
T 2o2g_A 10 PQEYAVSVSV-GEVKLKGNLVIPN----------------GATGIVLFAHGSGSSRYSPRNRYVAEVLQQAGLATLLIDL 72 (223)
T ss_dssp CCEEEEEEEE-TTEEEEEEEECCT----------------TCCEEEEEECCTTCCTTCHHHHHHHHHHHHHTCEEEEECS
T ss_pred ceeeEEEEec-CCeEEEEEEecCC----------------CCceEEEEecCCCCCCCccchHHHHHHHHHCCCEEEEEcC
Confidence 3445555554 8889988777652 2578999999997666554447788999999999999999
Q ss_pred CCCCCCCCCCCC----CCCCCchHHHHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcc
Q 008093 198 RGLGGVSITSDC----FYNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (578)
Q Consensus 198 RG~G~S~~~~~~----~~~~~~~~Dl~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d 271 (578)
||+|.+...... .....+.+|+.++++++..+. +..+++++||||||.+++.++..+++ +++++|++++..+
T Consensus 73 ~g~g~s~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~--~v~~~v~~~~~~~ 150 (223)
T 2o2g_A 73 LTQEEEEIDLRTRHLRFDIGLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPE--TVQAVVSRGGRPD 150 (223)
T ss_dssp SCHHHHHHHHHHCSSTTCHHHHHHHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTT--TEEEEEEESCCGG
T ss_pred CCcCCCCccchhhcccCcHHHHHHHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCC--ceEEEEEeCCCCC
Confidence 999987533211 112344689999999998764 34589999999999999999999887 8999999976432
Q ss_pred hhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccc
Q 008093 272 LLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTY 351 (578)
Q Consensus 272 ~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~ 351 (578)
.. ...
T Consensus 151 ~~---------------------------------------------------------------------------~~~ 155 (223)
T 2o2g_A 151 LA---------------------------------------------------------------------------PSA 155 (223)
T ss_dssp GC---------------------------------------------------------------------------TTT
T ss_pred cC---------------------------------------------------------------------------HHH
Confidence 10 023
Q ss_pred cCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhc
Q 008093 352 VGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 352 l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~ 422 (578)
+.++++|+|+++|++|+++|.+.. .......++.++.+++++||....+ .....+.+.+.+||++.+
T Consensus 156 ~~~~~~P~l~i~g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~~H~~~~~---~~~~~~~~~i~~fl~~~l 222 (223)
T 2o2g_A 156 LPHVKAPTLLIVGGYDLPVIAMNE-DALEQLQTSKRLVIIPRASHLFEEP---GALTAVAQLASEWFMHYL 222 (223)
T ss_dssp GGGCCSCEEEEEETTCHHHHHHHH-HHHHHCCSSEEEEEETTCCTTCCST---THHHHHHHHHHHHHHHHC
T ss_pred HhcCCCCEEEEEccccCCCCHHHH-HHHHhhCCCeEEEEeCCCCcccCCh---HHHHHHHHHHHHHHHHhc
Confidence 456789999999999999975432 2344556889999999999984332 112368889999998653
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=99.87 E-value=9.2e-22 Score=199.83 Aligned_cols=255 Identities=13% Similarity=0.118 Sum_probs=151.7
Q ss_pred CCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeC
Q 008093 118 FSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 197 (578)
Q Consensus 118 ~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~ 197 (578)
..++.+.++. ||..+.+... .++|+||++||++++ ...| +.++..|++ ||+|+++|+
T Consensus 46 ~~~~~~~~~~-~~~~~~~~~~-------------------g~~p~vv~lhG~~~~-~~~~-~~~~~~L~~-~~~v~~~D~ 102 (314)
T 3kxp_A 46 DHFISRRVDI-GRITLNVREK-------------------GSGPLMLFFHGITSN-SAVF-EPLMIRLSD-RFTTIAVDQ 102 (314)
T ss_dssp -CCEEEEEEC-SSCEEEEEEE-------------------CCSSEEEEECCTTCC-GGGG-HHHHHTTTT-TSEEEEECC
T ss_pred CCcceeeEEE-CCEEEEEEec-------------------CCCCEEEEECCCCCC-HHHH-HHHHHHHHc-CCeEEEEeC
Confidence 3456666655 6777765432 126789999999654 4455 678888776 799999999
Q ss_pred CCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhH
Q 008093 198 RGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDR 277 (578)
Q Consensus 198 RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~ 277 (578)
||||.|+..........+.+|+.++++++. ..+++++||||||.+++.++.++|+ +++++|+++++........
T Consensus 103 ~G~G~S~~~~~~~~~~~~~~dl~~~l~~l~----~~~v~lvG~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~ 176 (314)
T 3kxp_A 103 RGHGLSDKPETGYEANDYADDIAGLIRTLA----RGHAILVGHSLGARNSVTAAAKYPD--LVRSVVAIDFTPYIETEAL 176 (314)
T ss_dssp TTSTTSCCCSSCCSHHHHHHHHHHHHHHHT----SSCEEEEEETHHHHHHHHHHHHCGG--GEEEEEEESCCTTCCHHHH
T ss_pred CCcCCCCCCCCCCCHHHHHHHHHHHHHHhC----CCCcEEEEECchHHHHHHHHHhChh--heeEEEEeCCCCCCCcchh
Confidence 999999743332222344566666666653 3589999999999999999999988 8999999987654332110
Q ss_pred HHhhHHHHHHHHHH-----HHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhh-hhhcc----CCCC--CHHHHHH-
Q 008093 278 FIGRRLIQKIYDRA-----LTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSH-ATCLV----GKFE--TVDTYYR- 344 (578)
Q Consensus 278 ~l~~~~~~~~~~~~-----l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~-~~~~~----~g~~--~~~~yy~- 344 (578)
.... ..+... ....+........+.. .... ...+... +.... ..+. ....+..
T Consensus 177 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
T 3kxp_A 177 DALE----ARVNAGSQLFEDIKAVEAYLAGRYPNI----PADA------IRIRAESGYQPVDGGLRPLASSAAMAQTARG 242 (314)
T ss_dssp HHHH----HHTTTTCSCBSSHHHHHHHHHHHSTTS----CHHH------HHHHHHHSEEEETTEEEESSCHHHHHHHHHH
T ss_pred hHHH----HHhhhchhhhcCHHHHHHHHHhhcccC----chHH------HHHHhhhhhcccccccccccChhhhhhhccc
Confidence 0000 000000 0000000000000000 0000 0000000 00000 0000 0000000
Q ss_pred -hCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHh
Q 008093 345 -NCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 345 -~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
..+....+.++++|+|+++|++|+++|.+.... .....+++++.+++++||+.+.|. +..+.+.|.+||++
T Consensus 243 ~~~~~~~~~~~i~~P~Lii~G~~D~~~~~~~~~~-~~~~~~~~~~~~~~g~gH~~~~e~----~~~~~~~i~~fl~~ 314 (314)
T 3kxp_A 243 LRSDLVPAYRDVTKPVLIVRGESSKLVSAAALAK-TSRLRPDLPVVVVPGADHYVNEVS----PEITLKAITNFIDA 314 (314)
T ss_dssp TTSCCHHHHHHCCSCEEEEEETTCSSSCHHHHHH-HHHHCTTSCEEEETTCCSCHHHHC----HHHHHHHHHHHHHC
T ss_pred cCcchhhHhhcCCCCEEEEecCCCccCCHHHHHH-HHHhCCCceEEEcCCCCCcchhhC----HHHHHHHHHHHHhC
Confidence 113344567899999999999999999875543 445668899999999999998873 33688999999863
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A | Back alignment and structure |
|---|
Probab=99.87 E-value=2.9e-22 Score=198.39 Aligned_cols=233 Identities=15% Similarity=0.122 Sum_probs=138.2
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEE
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAI 238 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lv 238 (578)
.+|+||++||+++++. .| ..++..|.+. |+|+++|+||||.|+... ......+.+|+.++++.+. ..+++++
T Consensus 15 ~~~~vvllHG~~~~~~-~w-~~~~~~L~~~-~~via~Dl~G~G~S~~~~-~~~~~~~a~dl~~~l~~l~----~~~~~lv 86 (255)
T 3bf7_A 15 NNSPIVLVHGLFGSLD-NL-GVLARDLVND-HNIIQVDVRNHGLSPREP-VMNYPAMAQDLVDTLDALQ----IDKATFI 86 (255)
T ss_dssp CCCCEEEECCTTCCTT-TT-HHHHHHHTTT-SCEEEECCTTSTTSCCCS-CCCHHHHHHHHHHHHHHHT----CSCEEEE
T ss_pred CCCCEEEEcCCcccHh-HH-HHHHHHHHhh-CcEEEecCCCCCCCCCCC-CcCHHHHHHHHHHHHHHcC----CCCeeEE
Confidence 4577999999966544 45 6788888765 999999999999997643 1111244567777776653 4589999
Q ss_pred EEchHHHHHHHHHhhcCCCCCccEEEEEcC-CcchhhhhHHHhhHHHHHHHHHHHHHhH---HHHHhhhcccccccCCHH
Q 008093 239 GTSIGANILVKYLGEEGEKTPVAGAAAICS-PWDLLIGDRFIGRRLIQKIYDRALTIGL---QDYAQLHEPRYSRLANWE 314 (578)
Q Consensus 239 GhSmGG~ial~ya~~~p~~~~V~~~Vlis~-p~d~~~~~~~l~~~~~~~~~~~~l~~~l---~~~~~~~~~~l~~~~d~~ 314 (578)
||||||.+++.+|.++|+ +|+++|++++ |....... . ......+ .......+ ...... +.......
T Consensus 87 GhS~Gg~va~~~a~~~p~--~v~~lvl~~~~p~~~~~~~-~--~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~ 156 (255)
T 3bf7_A 87 GHSMGGKAVMALTALAPD--RIDKLVAIDIAPVDYHVRR-H--DEIFAAI-NAVSESDAQTRQQAAAI----MRQHLNEE 156 (255)
T ss_dssp EETHHHHHHHHHHHHCGG--GEEEEEEESCCSSCCCSCC-C--HHHHHHH-HHHHHSCCCSHHHHHHH----HTTTCCCH
T ss_pred eeCccHHHHHHHHHhCcH--hhccEEEEcCCcccCCccc-H--HHHHHHH-HhccccccccHHHHHHH----Hhhhcchh
Confidence 999999999999999998 8999999874 32211000 0 0000000 00000000 000000 00000000
Q ss_pred HHhccCCHHHHH-hhhhhccCCC--CCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEe
Q 008093 315 GIKKSRSIRDFD-SHATCLVGKF--ETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATT 391 (578)
Q Consensus 315 ~i~~~~s~~efd-~~~~~~~~g~--~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~ 391 (578)
. ...+. ..+....... ......+........+.++++|+|+|+|++|++++.+.... ..+..++.++.++
T Consensus 157 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~-~~~~~~~~~~~~i 229 (255)
T 3bf7_A 157 G------VIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWDHPALFIPGGNSPYVSEQYRDD-LLAQFPQARAHVI 229 (255)
T ss_dssp H------HHHHHHTTEETTEESSCHHHHHHTHHHHHCCCCCCCCCSCEEEECBTTCSTTCGGGHHH-HHHHCTTEEECCB
T ss_pred H------HHHHHHHhccCCceeecHHHHHhhhhhccccccccccCCCeEEEECCCCCCCCHHHHHH-HHHHCCCCeEEEe
Confidence 0 00000 0000000000 00111111111113467899999999999999998775443 4566789999999
Q ss_pred CCCCccccccccccCcccHHHHHHHHHHh
Q 008093 392 WHGGHLAFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 392 ~~GGH~~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
+++||+.+.|. | ..+.+.|.+|+++
T Consensus 230 ~~~gH~~~~e~--p--~~~~~~i~~fl~~ 254 (255)
T 3bf7_A 230 AGAGHWVHAEK--P--DAVLRAIRRYLND 254 (255)
T ss_dssp TTCCSCHHHHC--H--HHHHHHHHHHHHT
T ss_pred CCCCCccccCC--H--HHHHHHHHHHHhc
Confidence 99999999983 3 3588999999863
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A | Back alignment and structure |
|---|
Probab=99.87 E-value=6e-21 Score=191.13 Aligned_cols=234 Identities=11% Similarity=0.087 Sum_probs=135.1
Q ss_pred CCcEEEEECCCCCCCccHHHHH-----HHHHHHhCCceEEEEeCCCCCCCCCCCCCCC---C-CCchHHHHHHHHHHHHH
Q 008093 159 TTPIAIVIPGLTSDSAASYIRH-----LVFNTAKRGWNVVVSNHRGLGGVSITSDCFY---N-AGWTEDAREVIGYLHHE 229 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~-----l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~---~-~~~~~Dl~~~i~~l~~~ 229 (578)
.+|+||++||++++....| .. ++..|.+ +|+|+++|+||||.|....+..+ . ..+.+|+.++++++
T Consensus 34 ~~p~vvllHG~~~~~~~~~-~~~~~~~~~~~L~~-~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l--- 108 (286)
T 2qmq_A 34 KRPAIFTYHDVGLNYKSCF-QPLFRFGDMQEIIQ-NFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCILQYL--- 108 (286)
T ss_dssp TCCEEEEECCTTCCHHHHH-HHHHTSHHHHHHHT-TSCEEEEECTTTSTTCCCCCTTCCCCCHHHHHHTHHHHHHHH---
T ss_pred CCCeEEEeCCCCCCchhhh-hhhhhhchhHHHhc-CCCEEEecCCCCCCCCCCCCCCCCccCHHHHHHHHHHHHHHh---
Confidence 5788999999965444334 33 6677765 69999999999998754433222 2 23345666666554
Q ss_pred CCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccc
Q 008093 230 YPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSR 309 (578)
Q Consensus 230 ~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~ 309 (578)
+..+++++||||||.+++.++.++|+ +|+++|+++++............ .................
T Consensus 109 -~~~~~~lvG~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~------ 174 (286)
T 2qmq_A 109 -NFSTIIGVGVGAGAYILSRYALNHPD--TVEGLVLINIDPNAKGWMDWAAH-----KLTGLTSSIPDMILGHL------ 174 (286)
T ss_dssp -TCCCEEEEEETHHHHHHHHHHHHCGG--GEEEEEEESCCCCCCCHHHHHHH-----HHHHTTSCHHHHHHHHH------
T ss_pred -CCCcEEEEEEChHHHHHHHHHHhChh--heeeEEEECCCCcccchhhhhhh-----hhccccccchHHHHHHH------
Confidence 34589999999999999999999988 89999999986543221111100 00000000000000000
Q ss_pred cCCHHHHhccC-CHHHHHhhhhhccCCCCCHHHH---HHhCC----cccccCCCccceEEEEeCCCCCCCCCCcchHHHh
Q 008093 310 LANWEGIKKSR-SIRDFDSHATCLVGKFETVDTY---YRNCS----SSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECR 381 (578)
Q Consensus 310 ~~d~~~i~~~~-s~~efd~~~~~~~~g~~~~~~y---y~~~s----~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~ 381 (578)
.......... ....+...+.. .........+ +.... ....+.++++|+|+|+|++|+++|. .......
T Consensus 175 -~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~--~~~~~~~ 250 (286)
T 2qmq_A 175 -FSQEELSGNSELIQKYRGIIQH-APNLENIELYWNSYNNRRDLNFERGGETTLKCPVMLVVGDQAPHEDA--VVECNSK 250 (286)
T ss_dssp -SCHHHHHTTCHHHHHHHHHHHT-CTTHHHHHHHHHHHHTCCCCCSEETTEECCCSCEEEEEETTSTTHHH--HHHHHHH
T ss_pred -hcCCCCCcchHHHHHHHHHHHh-cCCcchHHHHHHHHhhhhhhhhhhchhccCCCCEEEEecCCCccccH--HHHHHHH
Confidence 0000000000 00001110000 0000000111 11111 1245678999999999999999982 2223344
Q ss_pred cCC-CEEEEEeCCCCccccccccccCcccHHHHHHHHHH
Q 008093 382 ANK-NVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 382 ~~~-~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
..+ ++++.+++++||+.++|. +..+.+.|.+||+
T Consensus 251 ~~~~~~~~~~~~~~gH~~~~e~----p~~~~~~i~~fl~ 285 (286)
T 2qmq_A 251 LDPTQTSFLKMADSGGQPQLTQ----PGKLTEAFKYFLQ 285 (286)
T ss_dssp SCGGGEEEEEETTCTTCHHHHC----HHHHHHHHHHHHC
T ss_pred hcCCCceEEEeCCCCCcccccC----hHHHHHHHHHHhc
Confidence 555 899999999999999883 3358899999985
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=2.6e-21 Score=190.49 Aligned_cols=242 Identities=10% Similarity=-0.002 Sum_probs=140.9
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCC-CCchHHHHHHHHHHHHHCCCCcEE
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN-AGWTEDAREVIGYLHHEYPKAPLF 236 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~-~~~~~Dl~~~i~~l~~~~~~~~i~ 236 (578)
.++|+||++||++++ ...| ..++..|.++||+|+++|+||||.|+......+. ..+.+|+.++++.+ .+..+++
T Consensus 10 ~~~~~vvllHG~~~~-~~~~-~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~l~~l---~~~~~~~ 84 (267)
T 3sty_A 10 FVKKHFVLVHAAFHG-AWCW-YKIVALMRSSGHNVTALDLGASGINPKQALQIPNFSDYLSPLMEFMASL---PANEKII 84 (267)
T ss_dssp CCCCEEEEECCTTCC-GGGG-HHHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHHHHHHHHHHTS---CTTSCEE
T ss_pred CCCCeEEEECCCCCC-cchH-HHHHHHHHhcCCeEEEeccccCCCCCCcCCccCCHHHHHHHHHHHHHhc---CCCCCEE
Confidence 467899999999654 4445 6889999999999999999999999765332222 22334444444333 2467999
Q ss_pred EEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcc---cc-----c
Q 008093 237 AIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEP---RY-----S 308 (578)
Q Consensus 237 lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~---~l-----~ 308 (578)
++||||||.+++.++..+|+ +|+++|+++++......... ........ ........... .. .
T Consensus 85 lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~-------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 154 (267)
T 3sty_A 85 LVGHALGGLAISKAMETFPE--KISVAVFLSGLMPGPNIDAT-------TVCTKAGS-AVLGQLDNCVTYENGPTNPPTT 154 (267)
T ss_dssp EEEETTHHHHHHHHHHHSGG--GEEEEEEESCCCCBTTBCHH-------HHHHHHHH-TTTTCTTCEEECTTCTTSCCCE
T ss_pred EEEEcHHHHHHHHHHHhChh--hcceEEEecCCCCCCcchHH-------HHHHHhcc-cchhhhhhhhhhhhhhhcccch
Confidence 99999999999999999998 89999999986533221100 00000000 00000000000 00 0
Q ss_pred ccCCHHHH----hccCCHHHHH--hhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhc
Q 008093 309 RLANWEGI----KKSRSIRDFD--SHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRA 382 (578)
Q Consensus 309 ~~~d~~~i----~~~~s~~efd--~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~ 382 (578)
........ .......... ...... .......++... .........++|+|+|+|++|+++|.+.... ....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~-~~~~ 231 (267)
T 3sty_A 155 LIAGPKFLATNVYHLSPIEDLALATALVRP-LYLYLAEDISKE-VVLSSKRYGSVKRVFIVATENDALKKEFLKL-MIEK 231 (267)
T ss_dssp EECCHHHHHHHTSTTSCHHHHHHHHHHCCC-EECCCHHHHHHH-CCCCTTTGGGSCEEEEECCCSCHHHHHHHHH-HHHH
T ss_pred hhhhHHHHHHhhcccCCHHHHHHHHHhhcc-chhHHHHHhhcc-hhcccccccCCCEEEEEeCCCCccCHHHHHH-HHHh
Confidence 00000000 0000000000 000000 001111222221 1122222237999999999999998775433 4556
Q ss_pred CCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 383 NKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 383 ~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
.++.++.+++++||+.++|. | ..+.+.|.+|+++.
T Consensus 232 ~~~~~~~~i~~~gH~~~~e~--p--~~~~~~i~~fl~~~ 266 (267)
T 3sty_A 232 NPPDEVKEIEGSDHVTMMSK--P--QQLFTTLLSIANKY 266 (267)
T ss_dssp SCCSEEEECTTCCSCHHHHS--H--HHHHHHHHHHHHHC
T ss_pred CCCceEEEeCCCCccccccC--h--HHHHHHHHHHHHhc
Confidence 68899999999999999983 3 36899999999863
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.7e-22 Score=205.73 Aligned_cols=103 Identities=14% Similarity=0.125 Sum_probs=83.1
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCC-CCCC-CCchHHHHHHHHHHHHHCCCCcEEE
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSD-CFYN-AGWTEDAREVIGYLHHEYPKAPLFA 237 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~-~~~~-~~~~~Dl~~~i~~l~~~~~~~~i~l 237 (578)
+|+|||+||+++ +...| +.++..|.++||+|+++|+||||.|+.... ..|+ ..+.+|+.++++.+. ..++++
T Consensus 46 g~~vvllHG~~~-~~~~w-~~~~~~L~~~g~rvia~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~ll~~l~----~~~~~l 119 (297)
T 2xt0_A 46 EHTFLCLHGEPS-WSFLY-RKMLPVFTAAGGRVVAPDLFGFGRSDKPTDDAVYTFGFHRRSLLAFLDALQ----LERVTL 119 (297)
T ss_dssp SCEEEEECCTTC-CGGGG-TTTHHHHHHTTCEEEEECCTTSTTSCEESCGGGCCHHHHHHHHHHHHHHHT----CCSEEE
T ss_pred CCeEEEECCCCC-cceeH-HHHHHHHHhCCcEEEEeCCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHhC----CCCEEE
Confidence 577999999965 44445 678889998899999999999999975432 2233 345577777777664 458999
Q ss_pred EEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 238 IGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 238 vGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
|||||||.+++.+|.++|+ +|+++|+++++.
T Consensus 120 vGhS~Gg~va~~~A~~~P~--~v~~lvl~~~~~ 150 (297)
T 2xt0_A 120 VCQDWGGILGLTLPVDRPQ--LVDRLIVMNTAL 150 (297)
T ss_dssp EECHHHHHHHTTHHHHCTT--SEEEEEEESCCC
T ss_pred EEECchHHHHHHHHHhChH--HhcEEEEECCCC
Confidence 9999999999999999999 899999999854
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=99.86 E-value=5.2e-22 Score=199.26 Aligned_cols=124 Identities=23% Similarity=0.355 Sum_probs=94.1
Q ss_pred eeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCC
Q 008093 120 YRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRG 199 (578)
Q Consensus 120 y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG 199 (578)
++...+...||.++.+....++ +++|+||++||+++ +...| ..++..|.+ ||+|+++|+||
T Consensus 5 ~~~~~~~~~~g~~l~~~~~g~~----------------~~~~~vvllHG~~~-~~~~~-~~~~~~L~~-~~~vi~~Dl~G 65 (285)
T 3bwx_A 5 YEDRYWTSSDGLRLHFRAYEGD----------------ISRPPVLCLPGLTR-NARDF-EDLATRLAG-DWRVLCPEMRG 65 (285)
T ss_dssp SEEEEEECTTSCEEEEEEECBC----------------TTSCCEEEECCTTC-CGGGG-HHHHHHHBB-TBCEEEECCTT
T ss_pred cccCeeecCCCceEEEEEcCCC----------------CCCCcEEEECCCCc-chhhH-HHHHHHhhc-CCEEEeecCCC
Confidence 4566778889998887654321 12567999999965 44456 678888876 99999999999
Q ss_pred CCCCCCCC-CCCCC-CCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcC
Q 008093 200 LGGVSITS-DCFYN-AGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICS 268 (578)
Q Consensus 200 ~G~S~~~~-~~~~~-~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~ 268 (578)
||.|+... ...++ ..+.+|+.++++.+. ..+++++||||||.+++.+|.++|+ +|+++|++++
T Consensus 66 ~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~----~~~~~lvGhS~Gg~va~~~a~~~p~--~v~~lvl~~~ 130 (285)
T 3bwx_A 66 RGDSDYAKDPMTYQPMQYLQDLEALLAQEG----IERFVAIGTSLGGLLTMLLAAANPA--RIAAAVLNDV 130 (285)
T ss_dssp BTTSCCCSSGGGCSHHHHHHHHHHHHHHHT----CCSEEEEEETHHHHHHHHHHHHCGG--GEEEEEEESC
T ss_pred CCCCCCCCCccccCHHHHHHHHHHHHHhcC----CCceEEEEeCHHHHHHHHHHHhCch--heeEEEEecC
Confidence 99997543 12222 234577777777653 4589999999999999999999998 8999999864
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.3e-21 Score=186.66 Aligned_cols=200 Identities=15% Similarity=0.215 Sum_probs=149.1
Q ss_pred CeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHH--HHHHHHhCCceEEEEe
Q 008093 119 SYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRH--LVFNTAKRGWNVVVSN 196 (578)
Q Consensus 119 ~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~--l~~~l~~~Gy~Vvv~D 196 (578)
++++..++. ||..+.+..+.|.+ ++.+|+||++||+++ +...| .. ++..+.++||+|+++|
T Consensus 6 ~~~~~~~~~-~g~~l~~~~~~p~~--------------~~~~~~vv~~hG~~~-~~~~~-~~~~~~~~l~~~G~~v~~~d 68 (210)
T 1imj_A 6 EQREGTIQV-QGQALFFREALPGS--------------GQARFSVLLLHGIRF-SSETW-QNLGTLHRLAQAGYRAVAID 68 (210)
T ss_dssp EECCCCEEE-TTEEECEEEEECSS--------------SCCSCEEEECCCTTC-CHHHH-HHHTHHHHHHHTTCEEEEEC
T ss_pred ccccceEee-CCeEEEEEEeCCCC--------------CCCCceEEEECCCCC-cccee-ecchhHHHHHHCCCeEEEec
Confidence 344555555 88889877765532 246789999999954 45455 45 5889999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCch--HHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhh
Q 008093 197 HRGLGGVSITSDCFYNAGWT--EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLI 274 (578)
Q Consensus 197 ~RG~G~S~~~~~~~~~~~~~--~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~ 274 (578)
+||+|.|...........+. +|+.++++.+. ..+++++|||+||.+++.++..+++ +++++|+++++.....
T Consensus 69 ~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~G~S~Gg~~a~~~a~~~~~--~v~~~v~~~~~~~~~~ 142 (210)
T 1imj_A 69 LPGLGHSKEAAAPAPIGELAPGSFLAAVVDALE----LGPPVVISPSLSGMYSLPFLTAPGS--QLPGFVPVAPICTDKI 142 (210)
T ss_dssp CTTSGGGTTSCCSSCTTSCCCTHHHHHHHHHHT----CCSCEEEEEGGGHHHHHHHHTSTTC--CCSEEEEESCSCGGGS
T ss_pred CCCCCCCCCCCCcchhhhcchHHHHHHHHHHhC----CCCeEEEEECchHHHHHHHHHhCcc--ccceEEEeCCCccccc
Confidence 99999987654322223344 78877777663 4589999999999999999999988 7999999987643100
Q ss_pred hhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCC
Q 008093 275 GDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGN 354 (578)
Q Consensus 275 ~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~ 354 (578)
....+.+
T Consensus 143 -------------------------------------------------------------------------~~~~~~~ 149 (210)
T 1imj_A 143 -------------------------------------------------------------------------NAANYAS 149 (210)
T ss_dssp -------------------------------------------------------------------------CHHHHHT
T ss_pred -------------------------------------------------------------------------cchhhhh
Confidence 0122345
Q ss_pred CccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 355 VSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 355 I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
+++|+++++|++|+ ++.+.... . +..++.++.+++++||..+.+. +..+.+.+.+|++++
T Consensus 150 ~~~p~l~i~g~~D~-~~~~~~~~-~-~~~~~~~~~~~~~~~H~~~~~~----~~~~~~~i~~fl~~~ 209 (210)
T 1imj_A 150 VKTPALIVYGDQDP-MGQTSFEH-L-KQLPNHRVLIMKGAGHPCYLDK----PEEWHTGLLDFLQGL 209 (210)
T ss_dssp CCSCEEEEEETTCH-HHHHHHHH-H-TTSSSEEEEEETTCCTTHHHHC----HHHHHHHHHHHHHTC
T ss_pred CCCCEEEEEcCccc-CCHHHHHH-H-hhCCCCCEEEecCCCcchhhcC----HHHHHHHHHHHHHhc
Confidence 78999999999999 88765443 3 5667899999999999987773 235788999999864
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A | Back alignment and structure |
|---|
Probab=99.77 E-value=1.5e-23 Score=209.86 Aligned_cols=248 Identities=13% Similarity=0.105 Sum_probs=140.4
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCC-----CCCCCCCchHHHHHHHHHHHHHCCCC
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITS-----DCFYNAGWTEDAREVIGYLHHEYPKA 233 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~-----~~~~~~~~~~Dl~~~i~~l~~~~~~~ 233 (578)
++|+||++||++++ ...| ..++..|. +||+|+++|+||||.|.... .......+.+|+.++++++. ..
T Consensus 24 ~~p~vv~lHG~~~~-~~~~-~~~~~~l~-~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~~l~~l~----~~ 96 (304)
T 3b12_A 24 SGPALLLLHGFPQN-LHMW-ARVAPLLA-NEYTVVCADLRGYGGSSKPVGAPDHANYSFRAMASDQRELMRTLG----FE 96 (304)
Confidence 45779999999654 4445 67888887 79999999999999997652 22223456678888887764 34
Q ss_pred cEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhH---HHHH--------HHHHHHHHhHHHHHhh
Q 008093 234 PLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRR---LIQK--------IYDRALTIGLQDYAQL 302 (578)
Q Consensus 234 ~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~---~~~~--------~~~~~l~~~l~~~~~~ 302 (578)
+++++||||||.+++.+|.++|+ +|+++|+++++............. .... ............+...
T Consensus 97 ~~~lvG~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (304)
T 3b12_A 97 RFHLVGHARGGRTGHRMALDHPD--SVLSLAVLDIIPTYVMFEEVDRFVARAYWHWYFLQQPAPYPEKVIGADPDTFYEG 174 (304)
Confidence 79999999999999999999998 899999999865432211100000 0000 0000000000000000
Q ss_pred -hcccccccCCHHHHhccCCHHHHHhhhhh------ccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCc
Q 008093 303 -HEPRYSRLANWEGIKKSRSIRDFDSHATC------LVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAI 375 (578)
Q Consensus 303 -~~~~l~~~~d~~~i~~~~s~~efd~~~~~------~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~ 375 (578)
....+. .....+ .......+...+.. ....+.....+.........+.++++|+|+|+|++|+++++...
T Consensus 175 ~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~ 251 (304)
T 3b12_A 175 CLFGWGA--TGADGF-DPEQLEEYRKQWRDPAAIHGSCCDYRAGGTIDFELDHGDLGRQVQCPALVFSGSAGLMHSLFEM 251 (304)
Confidence 000000 000000 00000000000000 00011111111101111122788999999999999976643322
Q ss_pred chHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcC
Q 008093 376 PWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHS 423 (578)
Q Consensus 376 ~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~ 423 (578)
........+++.+.++ ++||+.+.|. + ..+.+.|.+||+....
T Consensus 252 ~~~~~~~~~~~~~~~i-~~gH~~~~e~--p--~~~~~~i~~fl~~~~~ 294 (304)
T 3b12_A 252 QVVWAPRLANMRFASL-PGGHFFVDRF--P--DDTARILREFLSDARS 294 (304)
Confidence 2233445667888888 9999999883 3 3588999999987643
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.4e-20 Score=195.29 Aligned_cols=278 Identities=12% Similarity=0.065 Sum_probs=165.9
Q ss_pred CCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeC
Q 008093 118 FSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 197 (578)
Q Consensus 118 ~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~ 197 (578)
+..++..+...||..+..+++.|.+. .....|+||++||++++.. .|...++..++++||+|+++|+
T Consensus 66 ~~~~~~~~~~~~g~~~~~~~~~p~~~------------~~~~~p~vv~~hG~~~~~~-~~~~~~~~~l~~~G~~v~~~d~ 132 (367)
T 2hdw_A 66 VEHRKVTFANRYGITLAADLYLPKNR------------GGDRLPAIVIGGPFGAVKE-QSSGLYAQTMAERGFVTLAFDP 132 (367)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEESSC------------CSSCEEEEEEECCTTCCTT-SHHHHHHHHHHHTTCEEEEECC
T ss_pred ceeEEEEEecCCCCEEEEEEEeCCCC------------CCCCCCEEEEECCCCCcch-hhHHHHHHHHHHCCCEEEEECC
Confidence 44566677788999999888876431 1245689999999966444 4434578899999999999999
Q ss_pred CCCCCCCCCCCCCCC-CCchHHHHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhh
Q 008093 198 RGLGGVSITSDCFYN-AGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLI 274 (578)
Q Consensus 198 RG~G~S~~~~~~~~~-~~~~~Dl~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~ 274 (578)
||+|.|......... ....+|+.++++++..+. +..+++++||||||.+++.++..++ +++++|++++ ++...
T Consensus 133 ~g~g~s~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p---~~~~~v~~~p-~~~~~ 208 (367)
T 2hdw_A 133 SYTGESGGQPRNVASPDINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDK---RVKAVVTSTM-YDMTR 208 (367)
T ss_dssp TTSTTSCCSSSSCCCHHHHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT---TCCEEEEESC-CCHHH
T ss_pred CCcCCCCCcCccccchhhHHHHHHHHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCC---CccEEEEecc-ccccH
Confidence 999998754332211 235589999999998764 2458999999999999999999886 4999999984 44321
Q ss_pred hhHH-Hh----hHHHHHHHHHHHHHhHHHHHhhhccc---ccccCCHHHHhccCCHHHHHhhhhhcc----------CCC
Q 008093 275 GDRF-IG----RRLIQKIYDRALTIGLQDYAQLHEPR---YSRLANWEGIKKSRSIRDFDSHATCLV----------GKF 336 (578)
Q Consensus 275 ~~~~-l~----~~~~~~~~~~~l~~~l~~~~~~~~~~---l~~~~d~~~i~~~~s~~efd~~~~~~~----------~g~ 336 (578)
.... .. .......................... ++...+.. .....+....+.... ..+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (367)
T 2hdw_A 209 VMSKGYNDSVTLEQRTRTLEQLGQQRWKDAESGTPAYQPPYNELKGGE----AQFLVDYHDYYMTPRGYHPRAVNSGNAW 284 (367)
T ss_dssp HHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHHTSCCBCSCTTCCCSCC----CHHHHHHHHHHTSTTTCCTTCSTTTCCC
T ss_pred HHhhhhccccchHHHHHHHHHHHHHHHHHhccCCceeecCCCcccccc----ccccCCccceeecccccCcccccccchh
Confidence 1000 00 00001111111111111111000000 00000000 000011111111000 000
Q ss_pred -CCHHHHHHhCCcccccCCCc-cceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHH
Q 008093 337 -ETVDTYYRNCSSSTYVGNVS-IPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAV 414 (578)
Q Consensus 337 -~~~~~yy~~~s~~~~l~~I~-vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v 414 (578)
......+...+....+.+++ +|+|+++|++|. +.+..........+++++.+++++||..+++. ++. .+.+.+
T Consensus 285 ~~~~~~~~~~~~~~~~~~~i~~~PvLii~G~~D~--~~~~~~~~~~~~~~~~~~~~~~g~gH~~~~~~--~~~-~~~~~i 359 (367)
T 2hdw_A 285 TMTTPLSFMNMPILTYIKEISPRPILLIHGERAH--SRYFSETAYAAAAEPKELLIVPGASHVDLYDR--LDR-IPFDRI 359 (367)
T ss_dssp BTTTHHHHTTSCSCTTGGGGTTSCEEEEEETTCT--THHHHHHHHHHSCSSEEEEEETTCCTTHHHHC--TTT-SCHHHH
T ss_pred hhhhHHHhcCCChhHhHHhhcCCceEEEecCCCC--CHHHHHHHHHhCCCCeeEEEeCCCCeeeeecC--chh-HHHHHH
Confidence 01122333445566788898 999999999998 44433322333678899999999999987763 332 267889
Q ss_pred HHHHHhh
Q 008093 415 NEYLGVL 421 (578)
Q Consensus 415 ~eFL~~~ 421 (578)
.+||++.
T Consensus 360 ~~fl~~~ 366 (367)
T 2hdw_A 360 AGFFDEH 366 (367)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 9999863
|
| >2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=9.8e-22 Score=194.99 Aligned_cols=204 Identities=14% Similarity=0.161 Sum_probs=147.7
Q ss_pred eeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCC--CCCccHHHHHHHHHHHhCCceEEEEeC
Q 008093 120 YRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLT--SDSAASYIRHLVFNTAKRGWNVVVSNH 197 (578)
Q Consensus 120 y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~--G~s~~~yi~~l~~~l~~~Gy~Vvv~D~ 197 (578)
.++..++..||..+.++++.+.+ ..+|+||++||.+ +++...| ..++..+.++||+|+++|+
T Consensus 38 ~~~~~i~~~~~~~~~~~~~~p~~---------------~~~p~vv~~HGgg~~~~~~~~~-~~~~~~l~~~G~~v~~~d~ 101 (262)
T 2pbl_A 38 RARLNLSYGEGDRHKFDLFLPEG---------------TPVGLFVFVHGGYWMAFDKSSW-SHLAVGALSKGWAVAMPSY 101 (262)
T ss_dssp GEEEEEESSSSTTCEEEEECCSS---------------SCSEEEEEECCSTTTSCCGGGC-GGGGHHHHHTTEEEEEECC
T ss_pred CCccccccCCCCCceEEEEccCC---------------CCCCEEEEEcCcccccCChHHH-HHHHHHHHhCCCEEEEeCC
Confidence 35667888888888899986532 4678999999942 3455555 6788889899999999999
Q ss_pred CCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhc------CCCCCccEEEEEcCCcc
Q 008093 198 RGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEE------GEKTPVAGAAAICSPWD 271 (578)
Q Consensus 198 RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~------p~~~~V~~~Vlis~p~d 271 (578)
||+|... .....+|+.++++++..+.+ .+++++||||||.+++.++..+ ++ +++++|++++.++
T Consensus 102 ~~~~~~~-------~~~~~~d~~~~~~~l~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~--~v~~~vl~~~~~~ 171 (262)
T 2pbl_A 102 ELCPEVR-------ISEITQQISQAVTAAAKEID-GPIVLAGHSAGGHLVARMLDPEVLPEAVGA--RIRNVVPISPLSD 171 (262)
T ss_dssp CCTTTSC-------HHHHHHHHHHHHHHHHHHSC-SCEEEEEETHHHHHHHHTTCTTTSCHHHHT--TEEEEEEESCCCC
T ss_pred CCCCCCC-------hHHHHHHHHHHHHHHHHhcc-CCEEEEEECHHHHHHHHHhccccccccccc--cceEEEEecCccC
Confidence 9987532 12456899999999998776 7899999999999999999886 55 7999999999877
Q ss_pred hhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccc
Q 008093 272 LLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTY 351 (578)
Q Consensus 272 ~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~ 351 (578)
........ +...+ ... ...+...++...
T Consensus 172 ~~~~~~~~--------~~~~~--------------------------~~~------------------~~~~~~~~~~~~ 199 (262)
T 2pbl_A 172 LRPLLRTS--------MNEKF--------------------------KMD------------------ADAAIAESPVEM 199 (262)
T ss_dssp CGGGGGST--------THHHH--------------------------CCC------------------HHHHHHTCGGGC
T ss_pred chHHHhhh--------hhhhh--------------------------CCC------------------HHHHHhcCcccc
Confidence 53211000 00000 000 011123344456
Q ss_pred cCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCcccccccc
Q 008093 352 VGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGL 403 (578)
Q Consensus 352 l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~ 403 (578)
+.++++|+|+++|++|++++.+........ .+ +++.+++++||+.++|..
T Consensus 200 ~~~~~~P~lii~G~~D~~~~~~~~~~~~~~-~~-~~~~~~~~~~H~~~~~~~ 249 (262)
T 2pbl_A 200 QNRYDAKVTVWVGGAERPAFLDQAIWLVEA-WD-ADHVIAFEKHHFNVIEPL 249 (262)
T ss_dssp CCCCSCEEEEEEETTSCHHHHHHHHHHHHH-HT-CEEEEETTCCTTTTTGGG
T ss_pred cCCCCCCEEEEEeCCCCcccHHHHHHHHHH-hC-CeEEEeCCCCcchHHhhc
Confidence 778999999999999999887654432222 23 899999999999999853
|
| >2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.86 E-value=3.7e-21 Score=199.18 Aligned_cols=251 Identities=12% Similarity=0.015 Sum_probs=136.4
Q ss_pred CCcEEEEECCCCCCCcc------------HHHHHHHH---HHHhCCceEEEEeCCC--CCCCCCCCCCCC---------C
Q 008093 159 TTPIAIVIPGLTSDSAA------------SYIRHLVF---NTAKRGWNVVVSNHRG--LGGVSITSDCFY---------N 212 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~------------~yi~~l~~---~l~~~Gy~Vvv~D~RG--~G~S~~~~~~~~---------~ 212 (578)
.+|+||++||+++++.. .| ..++. .+.+.||+|+++|+|| +|.|........ .
T Consensus 45 ~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~l~~~g~~vi~~D~~G~~~G~s~~~~~~~~~~~~~~~~~~ 123 (366)
T 2pl5_A 45 KNNAILICHALSGDAHAAGYHSGSDKKPGWW-DDYIGPGKSFDTNQYFIICSNVIGGCKGSSGPLSIHPETSTPYGSRFP 123 (366)
T ss_dssp SCCEEEEECCSSCCSCCSSBSSTTCSSCCTT-TTTEETTSSEETTTCEEEEECCTTCSSSSSSTTSBCTTTSSBCGGGSC
T ss_pred CCceEEEecccCCcccccccccccccccchH-HhhcCCcccccccccEEEEecCCCcccCCCCCCCCCCCCCccccCCCC
Confidence 46889999999766552 34 44543 3556799999999999 788764321110 0
Q ss_pred CCchHHHHHHHHHHHHHCCCCcE-EEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHH---
Q 008093 213 AGWTEDAREVIGYLHHEYPKAPL-FAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIY--- 288 (578)
Q Consensus 213 ~~~~~Dl~~~i~~l~~~~~~~~i-~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~--- 288 (578)
....+|+.+.+..+.+..+..++ +++||||||.+++.+|.++|+ +|+++|+++++.................+.
T Consensus 124 ~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (366)
T 2pl5_A 124 FVSIQDMVKAQKLLVESLGIEKLFCVAGGSMGGMQALEWSIAYPN--SLSNCIVMASTAEHSAMQIAFNEVGRQAILSDP 201 (366)
T ss_dssp CCCHHHHHHHHHHHHHHTTCSSEEEEEEETHHHHHHHHHHHHSTT--SEEEEEEESCCSBCCHHHHHHHHHHHHHHHTST
T ss_pred cccHHHHHHHHHHHHHHcCCceEEEEEEeCccHHHHHHHHHhCcH--hhhheeEeccCccCCCccchhhHHHHHHHHhCc
Confidence 01223333333333344455688 799999999999999999998 899999999876543221111000000000
Q ss_pred --------------HHHHHHhHH--------HHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHH------
Q 008093 289 --------------DRALTIGLQ--------DYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVD------ 340 (578)
Q Consensus 289 --------------~~~l~~~l~--------~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~------ 340 (578)
...+...+. .........+.... ..........+...............
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (366)
T 2pl5_A 202 NWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGN---ILSTDFAVGSYLIYQGESFVDRFDANSYIYVT 278 (366)
T ss_dssp TCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSC---TTTTTTTSCGGGGSTTCCSSSCCCHHHHHHHH
T ss_pred ccccccccccccccchHHHHHhhccccCCHHHHHHHhhhhhhccc---ccchhhhHHHHHHHHHHhhhcccChhHHHHHH
Confidence 000000000 00000000000000 00000000000000000000000111
Q ss_pred HHHHhCC------cccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCC----CEEEEEe-CCCCccccccccccCccc
Q 008093 341 TYYRNCS------SSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANK----NVVLATT-WHGGHLAFFEGLTAAGMW 409 (578)
Q Consensus 341 ~yy~~~s------~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~----~~~l~~~-~~GGH~~~~eg~~~~~~w 409 (578)
..+.... ....+.+|++|+|+|+|++|+++|.+.... ..+..+ +.++.++ +++||+.+.|. + ..
T Consensus 279 ~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~e~--p--~~ 353 (366)
T 2pl5_A 279 KALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSRE-IVKSLEAADKRVFYVELQSGEGHDSFLLK--N--PK 353 (366)
T ss_dssp HHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHH-HHHHHHHTTCCEEEEEECCCBSSGGGGSC--C--HH
T ss_pred hhhhhhccccccchhhhhccCCCCEEEEecCCCcccCHHHHHH-HHHHhhhcccCeEEEEeCCCCCcchhhcC--h--hH
Confidence 1111111 113678999999999999999999875443 233334 7899999 89999999983 3 36
Q ss_pred HHHHHHHHHHh
Q 008093 410 WVRAVNEYLGV 420 (578)
Q Consensus 410 ~~~~v~eFL~~ 420 (578)
+.+.|.+||++
T Consensus 354 ~~~~i~~fl~~ 364 (366)
T 2pl5_A 354 QIEILKGFLEN 364 (366)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHcc
Confidence 88999999874
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.6e-21 Score=194.78 Aligned_cols=238 Identities=13% Similarity=0.090 Sum_probs=133.1
Q ss_pred cEEEEECCCCC--CCccHHHHHHH-HHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEE
Q 008093 161 PIAIVIPGLTS--DSAASYIRHLV-FNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFA 237 (578)
Q Consensus 161 PiVVllHGl~G--~s~~~yi~~l~-~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~l 237 (578)
++||++||+++ ++...| ..++ ..|.+ +|+|+++|+||||.|+......+ ..+|..+.+..+.+..+..++++
T Consensus 37 ~~vvllHG~~~~~~~~~~~-~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~---~~~~~~~~l~~~l~~l~~~~~~l 111 (289)
T 1u2e_A 37 ETVVLLHGSGPGATGWANF-SRNIDPLVEA-GYRVILLDCPGWGKSDSVVNSGS---RSDLNARILKSVVDQLDIAKIHL 111 (289)
T ss_dssp SEEEEECCCSTTCCHHHHT-TTTHHHHHHT-TCEEEEECCTTSTTSCCCCCSSC---HHHHHHHHHHHHHHHTTCCCEEE
T ss_pred ceEEEECCCCcccchhHHH-HHhhhHHHhc-CCeEEEEcCCCCCCCCCCCcccc---CHHHHHHHHHHHHHHhCCCceEE
Confidence 37999999952 223334 4555 66665 59999999999999976432112 12333333333333445568999
Q ss_pred EEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhh-----hHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCC
Q 008093 238 IGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIG-----DRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLAN 312 (578)
Q Consensus 238 vGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~-----~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d 312 (578)
+||||||.+++.+|.++|+ +|+++|+++++...... ...+ ... ...+.......+.......... .....
T Consensus 112 vGhS~GG~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 186 (289)
T 1u2e_A 112 LGNSMGGHSSVAFTLKWPE--RVGKLVLMGGGTGGMSLFTPMPTEGI-KRL-NQLYRQPTIENLKLMMDIFVFD-TSDLT 186 (289)
T ss_dssp EEETHHHHHHHHHHHHCGG--GEEEEEEESCSCCCCCSSSCSSCHHH-HHH-HHHHHSCCHHHHHHHHHTTSSC-TTSCC
T ss_pred EEECHhHHHHHHHHHHCHH--hhhEEEEECCCccccccccccchhhH-HHH-HHHHhcchHHHHHHHHHHhhcC-cccCC
Confidence 9999999999999999998 89999999875421100 0000 000 0000000000011111100000 00000
Q ss_pred HHHHhccCCHHHHHhhhhhccCCCCCHHHHHH-----hCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEE
Q 008093 313 WEGIKKSRSIRDFDSHATCLVGKFETVDTYYR-----NCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVV 387 (578)
Q Consensus 313 ~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~-----~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~ 387 (578)
.+.... .+......+ ..+......+. .......+.+|++|+|+|+|++|+++|.+.... .....++.+
T Consensus 187 ~~~~~~-----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~-~~~~~~~~~ 259 (289)
T 1u2e_A 187 DALFEA-----RLNNMLSRR-DHLENFVKSLEANPKQFPDFGPRLAEIKAQTLIVWGRNDRFVPMDAGLR-LLSGIAGSE 259 (289)
T ss_dssp HHHHHH-----HHHHHHHTH-HHHHHHHHHHHHCSCCSCCCGGGGGGCCSCEEEEEETTCSSSCTHHHHH-HHHHSTTCE
T ss_pred HHHHHH-----HHHHhhcCh-hHHHHHHHHHHhccccccchhhHHhhcCCCeEEEeeCCCCccCHHHHHH-HHhhCCCcE
Confidence 000000 000000000 00000000000 011235678899999999999999999875443 445678899
Q ss_pred EEEeCCCCccccccccccCcccHHHHHHHHHH
Q 008093 388 LATTWHGGHLAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 388 l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
+.+++++||+.++|. | ..+.+.|.+||+
T Consensus 260 ~~~i~~~gH~~~~e~--p--~~~~~~i~~fl~ 287 (289)
T 1u2e_A 260 LHIFRDCGHWAQWEH--A--DAFNQLVLNFLA 287 (289)
T ss_dssp EEEESSCCSCHHHHT--H--HHHHHHHHHHHT
T ss_pred EEEeCCCCCchhhcC--H--HHHHHHHHHHhc
Confidence 999999999999983 3 358899999985
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 | Back alignment and structure |
|---|
Probab=99.86 E-value=4.4e-20 Score=194.86 Aligned_cols=239 Identities=13% Similarity=0.107 Sum_probs=161.6
Q ss_pred CCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeC
Q 008093 118 FSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 197 (578)
Q Consensus 118 ~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~ 197 (578)
...++..++. ||.++...++.|.+ ..+.|+||++||+.++....+ ..+..++++||+|+++|+
T Consensus 125 ~~~~~v~~~~-dg~~i~~~l~~p~~--------------~~~~P~vl~~hG~~~~~~~~~--~~~~~l~~~G~~v~~~d~ 187 (386)
T 2jbw_A 125 PPAERHELVV-DGIPMPVYVRIPEG--------------PGPHPAVIMLGGLESTKEESF--QMENLVLDRGMATATFDG 187 (386)
T ss_dssp SCEEEEEEEE-TTEEEEEEEECCSS--------------SCCEEEEEEECCSSCCTTTTH--HHHHHHHHTTCEEEEECC
T ss_pred CCeEEEEEEe-CCEEEEEEEEcCCC--------------CCCCCEEEEeCCCCccHHHHH--HHHHHHHhCCCEEEEECC
Confidence 4567777777 89999887776643 245789999999966555444 347888899999999999
Q ss_pred CCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhh
Q 008093 198 RGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIG 275 (578)
Q Consensus 198 RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~ 275 (578)
||+|.+... ......+.+|+.++++++.++. +..+++++|||+||.+++.++.. ++ +++++|++ ++.+....
T Consensus 188 rG~G~s~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~la~~~a~~-~~--~~~a~v~~-~~~~~~~~ 261 (386)
T 2jbw_A 188 PGQGEMFEY--KRIAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAAC-EP--RLAACISW-GGFSDLDY 261 (386)
T ss_dssp TTSGGGTTT--CCSCSCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHH-CT--TCCEEEEE-SCCSCSTT
T ss_pred CCCCCCCCC--CCCCccHHHHHHHHHHHHHhCCCcCcccEEEEEEChHHHHHHHHHcC-Cc--ceeEEEEe-ccCChHHH
Confidence 999998321 1223345578889999998752 34689999999999999999988 66 79999999 87766432
Q ss_pred hHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCC
Q 008093 276 DRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNV 355 (578)
Q Consensus 276 ~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I 355 (578)
...+.. .+.... ... .......++. ...+...+....+.++
T Consensus 262 ~~~~~~-----~~~~~~----~~~-----------------~g~~~~~~~~-------------~~~~~~~~~~~~~~~i 302 (386)
T 2jbw_A 262 WDLETP-----LTKESW----KYV-----------------SKVDTLEEAR-------------LHVHAALETRDVLSQI 302 (386)
T ss_dssp GGGSCH-----HHHHHH----HHH-----------------TTCSSHHHHH-------------HHHHHHTCCTTTGGGC
T ss_pred HHhccH-----HHHHHH----HHH-----------------hCCCCHHHHH-------------HHHHHhCChhhhhccc
Confidence 211100 000000 000 0000111110 0223444555678889
Q ss_pred ccceEEEEeCCCCCCCCCCcchHHHhc-CCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcCC
Q 008093 356 SIPLLCISSLDDPVCTVEAIPWDECRA-NKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSS 424 (578)
Q Consensus 356 ~vPvLiI~g~dDpivp~~~~~~~~~~~-~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~~ 424 (578)
++|+|+++|++|+ ++.+......... ..++++.+++++||+. .+ ....+.+.+.+||++....
T Consensus 303 ~~P~Lii~G~~D~-v~~~~~~~l~~~l~~~~~~~~~~~~~gH~~-~~----~~~~~~~~i~~fl~~~l~~ 366 (386)
T 2jbw_A 303 ACPTYILHGVHDE-VPLSFVDTVLELVPAEHLNLVVEKDGDHCC-HN----LGIRPRLEMADWLYDVLVA 366 (386)
T ss_dssp CSCEEEEEETTSS-SCTHHHHHHHHHSCGGGEEEEEETTCCGGG-GG----GTTHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEECCCCC-CCHHHHHHHHHHhcCCCcEEEEeCCCCcCC-cc----chHHHHHHHHHHHHHhcCC
Confidence 9999999999999 8776444333333 2289999999999964 33 2235889999999987654
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... | Back alignment and structure |
|---|
Probab=99.86 E-value=3.2e-21 Score=191.82 Aligned_cols=239 Identities=13% Similarity=0.038 Sum_probs=137.4
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCC-CCchHHHHHHHHHHHHHCCCCcEEEE
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN-AGWTEDAREVIGYLHHEYPKAPLFAI 238 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~-~~~~~Dl~~~i~~l~~~~~~~~i~lv 238 (578)
+++|||+||+++ +...| +.++..|.++||+|+++|+||||.|+......++ ..+.+|+.++++.+. ...++++|
T Consensus 3 ~~~vvllHG~~~-~~~~w-~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~---~~~~~~lv 77 (257)
T 3c6x_A 3 FAHFVLIHTICH-GAWIW-HKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFLEALP---PGEKVILV 77 (257)
T ss_dssp CCEEEEECCTTC-CGGGG-TTHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHTHHHHHHHHTSC---TTCCEEEE
T ss_pred CCcEEEEcCCcc-CcCCH-HHHHHHHHhCCCEEEEeCCCCCCCCCCCcccccCHHHHHHHHHHHHHhcc---ccCCeEEE
Confidence 467999999954 44445 7888999888999999999999999653222222 234456666665441 23589999
Q ss_pred EEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccc--------ccc
Q 008093 239 GTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRY--------SRL 310 (578)
Q Consensus 239 GhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l--------~~~ 310 (578)
||||||.+++.++.++|+ +|+++|++++......... .......... +..........+ ...
T Consensus 78 GhSmGG~va~~~a~~~p~--~v~~lVl~~~~~~~~~~~~---~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 147 (257)
T 3c6x_A 78 GESCGGLNIAIAADKYCE--KIAAAVFHNSVLPDTEHCP---SYVVDKLMEV-----FPDWKDTTYFTYTKDGKEITGLK 147 (257)
T ss_dssp EEETHHHHHHHHHHHHGG--GEEEEEEEEECCCCSSSCT---THHHHHHHHH-----SCCCTTCEEEEEEETTEEEEEEE
T ss_pred EECcchHHHHHHHHhCch--hhheEEEEecccCCCCCcc---hhHHHHHhhc-----CcchhhhhhhhccCCCCcccccc
Confidence 999999999999999999 8999999987421110000 0000000000 000000000000 000
Q ss_pred CCHHHHh----ccCCHHHHH--hhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCC
Q 008093 311 ANWEGIK----KSRSIRDFD--SHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANK 384 (578)
Q Consensus 311 ~d~~~i~----~~~s~~efd--~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~ 384 (578)
.+...+. ......... .....+. ......+ ............++|+|+|+|++|+++|.+.... ..+..+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~P~l~i~G~~D~~~p~~~~~~-~~~~~~ 223 (257)
T 3c6x_A 148 LGFTLLRENLYTLCGPEEYELAKMLTRKG--SLFQNIL-AKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLW-QIENYK 223 (257)
T ss_dssp CCHHHHHHHTSTTSCHHHHHHHHHHCCCB--CCCHHHH-HHSCCCCTTTGGGSCEEEEECTTCSSSCHHHHHH-HHHHSC
T ss_pred ccHHHHHHHHhcCCCHHHHHHHHHhcCCC--ccchhhh-ccccccChhhcCcccEEEEEeCCCcccCHHHHHH-HHHHCC
Confidence 1111000 000000000 0000000 0011111 1111111111137899999999999999775433 455678
Q ss_pred CEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 385 NVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 385 ~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
+.++++++++||+.++|. | ..+++.|.+|++.+
T Consensus 224 ~~~~~~i~~~gH~~~~e~--P--~~~~~~l~~f~~~~ 256 (257)
T 3c6x_A 224 PDKVYKVEGGDHKLQLTK--T--KEIAEILQEVADTY 256 (257)
T ss_dssp CSEEEECCSCCSCHHHHS--H--HHHHHHHHHHHHHC
T ss_pred CCeEEEeCCCCCCcccCC--H--HHHHHHHHHHHHhc
Confidence 899999999999999993 3 36999999999753
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A | Back alignment and structure |
|---|
Probab=99.86 E-value=8.1e-22 Score=202.07 Aligned_cols=239 Identities=11% Similarity=0.052 Sum_probs=137.3
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCC-CCCC-CCchHHHHHHHHHHHHHCCCCcEEE
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSD-CFYN-AGWTEDAREVIGYLHHEYPKAPLFA 237 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~-~~~~-~~~~~Dl~~~i~~l~~~~~~~~i~l 237 (578)
+|+|||+||+++ +...| +.++..|.++||+|+++|+||||.|+.... ..|+ ..+.+|+.++++.+. ..++++
T Consensus 47 g~~vvllHG~~~-~~~~w-~~~~~~L~~~g~rvia~Dl~G~G~S~~~~~~~~y~~~~~a~dl~~ll~~l~----~~~~~l 120 (310)
T 1b6g_A 47 EDVFLCLHGEPT-WSYLY-RKMIPVFAESGARVIAPDFFGFGKSDKPVDEEDYTFEFHRNFLLALIERLD----LRNITL 120 (310)
T ss_dssp SCEEEECCCTTC-CGGGG-TTTHHHHHHTTCEEEEECCTTSTTSCEESCGGGCCHHHHHHHHHHHHHHHT----CCSEEE
T ss_pred CCEEEEECCCCC-chhhH-HHHHHHHHhCCCeEEEeCCCCCCCCCCCCCcCCcCHHHHHHHHHHHHHHcC----CCCEEE
Confidence 578999999965 44455 678889999899999999999999975432 2233 345577777777764 458999
Q ss_pred EEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhh--HH--H---hhHHHHHHHHHHHHHh--H--HHHHhhhccc
Q 008093 238 IGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGD--RF--I---GRRLIQKIYDRALTIG--L--QDYAQLHEPR 306 (578)
Q Consensus 238 vGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~--~~--l---~~~~~~~~~~~~l~~~--l--~~~~~~~~~~ 306 (578)
|||||||.+++.+|.++|+ +|+++|+++++....... .+ . ...... .+....... + ..........
T Consensus 121 vGhS~Gg~va~~~A~~~P~--rv~~Lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 197 (310)
T 1b6g_A 121 VVQDWGGFLGLTLPMADPS--RFKRLIIMNAXLMTDPVTQPAFSAFVTQPADGFT-AWKYDLVTPSDLRLDQFMKRWAPT 197 (310)
T ss_dssp EECTHHHHHHTTSGGGSGG--GEEEEEEESCCCCCCTTTCTHHHHTTTSSTTTHH-HHHHHHHSCSSCCHHHHHHHHSTT
T ss_pred EEcChHHHHHHHHHHhChH--hheEEEEeccccccCCccccchhhhhhccchHHH-HHHHHhccCchhhhhhHHhhcCCC
Confidence 9999999999999999999 899999999754210000 00 0 000000 000000000 0 0000000000
Q ss_pred ccccCCHHHHhcc-C------CHHHHHhhhhhccCCCCCHHHHHHhCCcccccC-CCccceEEEEeCCCCCCCCCCcchH
Q 008093 307 YSRLANWEGIKKS-R------SIRDFDSHATCLVGKFETVDTYYRNCSSSTYVG-NVSIPLLCISSLDDPVCTVEAIPWD 378 (578)
Q Consensus 307 l~~~~d~~~i~~~-~------s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~-~I~vPvLiI~g~dDpivp~~~~~~~ 378 (578)
+.. ......... . ....+.... .......+-........+. +|++|+|+|+|++|+++| +....
T Consensus 198 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~i~~P~Lvi~G~~D~~~~-~~~~~- 269 (310)
T 1b6g_A 198 LTE-AEASAYAAPFPDTSYQAGVRKFPKMV-----AQRDQAXIDISTEAISFWQNDWNGQTFMAIGMKDKLLG-PDVMY- 269 (310)
T ss_dssp CCH-HHHHHHHTTCSSGGGCHHHHHHHHHH-----HSCCHHHHHHHHHHHHHHHHTCCSEEEEEEETTCSSSS-HHHHH-
T ss_pred CCH-HHHHHHhcccCCccchHHHHHHHHHh-----cccccchhhhhhhHhhhhhccccCceEEEeccCcchhh-hHHHH-
Confidence 000 000000000 0 000000000 0000000000001123567 899999999999999998 54332
Q ss_pred HHhcCCCEEEEEe--CCCCccccccccccCcccHHHHHHHHHHh
Q 008093 379 ECRANKNVVLATT--WHGGHLAFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 379 ~~~~~~~~~l~~~--~~GGH~~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
..+..++.++.++ +++||+.+. . |+ .+.+.|.+||+.
T Consensus 270 ~~~~ip~~~~~~i~~~~~GH~~~~-~--p~--~~~~~i~~Fl~~ 308 (310)
T 1b6g_A 270 PMKALINGCPEPLEIADAGHFVQE-F--GE--QVAREALKHFAE 308 (310)
T ss_dssp HHHHHSTTCCCCEEETTCCSCGGG-G--HH--HHHHHHHHHHHH
T ss_pred HHHhcccccceeeecCCcccchhh-C--hH--HHHHHHHHHHhc
Confidence 4445567777666 999999887 4 44 499999999975
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A | Back alignment and structure |
|---|
Probab=99.86 E-value=8.7e-22 Score=195.11 Aligned_cols=228 Identities=15% Similarity=0.136 Sum_probs=145.8
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEE
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAI 238 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lv 238 (578)
.+|+||++||+++ +...| ..++..|.++||+|+++|+||+|.|+..........+.+|+.++++++..+ ..+++++
T Consensus 39 ~~~~vv~~HG~~~-~~~~~-~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~--~~~i~l~ 114 (270)
T 3rm3_A 39 GPVGVLLVHGFTG-TPHSM-RPLAEAYAKAGYTVCLPRLKGHGTHYEDMERTTFHDWVASVEEGYGWLKQR--CQTIFVT 114 (270)
T ss_dssp SSEEEEEECCTTC-CGGGT-HHHHHHHHHTTCEEEECCCTTCSSCHHHHHTCCHHHHHHHHHHHHHHHHTT--CSEEEEE
T ss_pred CCeEEEEECCCCC-ChhHH-HHHHHHHHHCCCEEEEeCCCCCCCCccccccCCHHHHHHHHHHHHHHHHhh--CCcEEEE
Confidence 4589999999965 44445 788999999999999999999999864322222235568999999999865 5689999
Q ss_pred EEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhc
Q 008093 239 GTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKK 318 (578)
Q Consensus 239 GhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~ 318 (578)
||||||.+++.++..+|+ ++++|+++++.+........... ..+..+.....+.+...........
T Consensus 115 G~S~Gg~~a~~~a~~~p~---v~~~v~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (270)
T 3rm3_A 115 GLSMGGTLTLYLAEHHPD---ICGIVPINAAVDIPAIAAGMTGG-----------GELPRYLDSIGSDLKNPDVKELAYE 180 (270)
T ss_dssp EETHHHHHHHHHHHHCTT---CCEEEEESCCSCCHHHHHHSCC--------------CCSEEECCCCCCSCTTCCCCCCS
T ss_pred EEcHhHHHHHHHHHhCCC---ccEEEEEcceecccccccchhcc-----------hhHHHHHHHhCccccccchHhhccc
Confidence 999999999999999876 99999999987653321111000 0000000000000000000000000
Q ss_pred cCCHHHHHhhhhhccCCCCCHHHHHHh-CCcccccCCCccceEEEEeCCCCCCCCCCcchHHHh-cCCCEEEEEeCCCCc
Q 008093 319 SRSIRDFDSHATCLVGKFETVDTYYRN-CSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECR-ANKNVVLATTWHGGH 396 (578)
Q Consensus 319 ~~s~~efd~~~~~~~~g~~~~~~yy~~-~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~-~~~~~~l~~~~~GGH 396 (578)
..... ....++.. ......+.++++|+|+++|++|+++|.+........ .+.++++.+++++||
T Consensus 181 ~~~~~--------------~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH 246 (270)
T 3rm3_A 181 KTPTA--------------SLLQLARLMAQTKAKLDRIVCPALIFVSDEDHVVPPGNADIIFQGISSTEKEIVRLRNSYH 246 (270)
T ss_dssp EEEHH--------------HHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHSCCSSEEEEEESSCCS
T ss_pred ccChh--------------HHHHHHHHHHHHHhhhhhcCCCEEEEECCCCcccCHHHHHHHHHhcCCCcceEEEeCCCCc
Confidence 00000 00001000 011245678899999999999999998855432222 234569999999999
Q ss_pred cccccccccCcccHHHHHHHHHHhh
Q 008093 397 LAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 397 ~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
..+.+. ....+.+.+.+||++.
T Consensus 247 ~~~~~~---~~~~~~~~i~~fl~~~ 268 (270)
T 3rm3_A 247 VATLDY---DQPMIIERSLEFFAKH 268 (270)
T ss_dssp CGGGST---THHHHHHHHHHHHHHH
T ss_pred ccccCc---cHHHHHHHHHHHHHhc
Confidence 998873 2246889999999864
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A | Back alignment and structure |
|---|
Probab=99.85 E-value=6.5e-21 Score=191.18 Aligned_cols=270 Identities=13% Similarity=0.055 Sum_probs=149.6
Q ss_pred CCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeC
Q 008093 118 FSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 197 (578)
Q Consensus 118 ~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~ 197 (578)
.+|++..+...||..+.+... .++|+||++||++++ ...| ..++..|.+. |+|+++|+
T Consensus 6 ~p~~~~~~~~~~g~~l~~~~~-------------------g~~~~vv~lHG~~~~-~~~~-~~~~~~L~~~-~~vi~~D~ 63 (302)
T 1mj5_A 6 KPFGEKKFIEIKGRRMAYIDE-------------------GTGDPILFQHGNPTS-SYLW-RNIMPHCAGL-GRLIACDL 63 (302)
T ss_dssp SCSSCCEEEEETTEEEEEEEE-------------------SCSSEEEEECCTTCC-GGGG-TTTGGGGTTS-SEEEEECC
T ss_pred ccCCcceEEEECCEEEEEEEc-------------------CCCCEEEEECCCCCc-hhhh-HHHHHHhccC-CeEEEEcC
Confidence 455233344558887776432 125789999999654 4445 6677777654 89999999
Q ss_pred CCCCCCCCCCCC----CCCCCchHHHHHHHHHHHHHCCC-CcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcch
Q 008093 198 RGLGGVSITSDC----FYNAGWTEDAREVIGYLHHEYPK-APLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (578)
Q Consensus 198 RG~G~S~~~~~~----~~~~~~~~Dl~~~i~~l~~~~~~-~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~ 272 (578)
||||.|...... .....+.+|+.++++++ +. .+++++||||||.+++.++.++|+ +|+++|+++++...
T Consensus 64 ~G~G~S~~~~~~~~~~~~~~~~~~~~~~~l~~l----~~~~~~~lvG~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~ 137 (302)
T 1mj5_A 64 IGMGDSDKLDPSGPERYAYAEHRDYLDALWEAL----DLGDRVVLVVHDWGSALGFDWARRHRE--RVQGIAYMEAIAMP 137 (302)
T ss_dssp TTSTTSCCCSSCSTTSSCHHHHHHHHHHHHHHT----TCTTCEEEEEEHHHHHHHHHHHHHTGG--GEEEEEEEEECCSC
T ss_pred CCCCCCCCCCCCCcccccHHHHHHHHHHHHHHh----CCCceEEEEEECCccHHHHHHHHHCHH--HHhheeeecccCCc
Confidence 999999755322 11123345555555443 44 689999999999999999999988 89999999986532
Q ss_pred hhhhH--HHhhHHHHHHHH---HHHHHhHHHHHhhhcc-cccccCCHHHHhc---c-----CCHHHHHhhhhhc-cCCCC
Q 008093 273 LIGDR--FIGRRLIQKIYD---RALTIGLQDYAQLHEP-RYSRLANWEGIKK---S-----RSIRDFDSHATCL-VGKFE 337 (578)
Q Consensus 273 ~~~~~--~l~~~~~~~~~~---~~l~~~l~~~~~~~~~-~l~~~~d~~~i~~---~-----~s~~efd~~~~~~-~~g~~ 337 (578)
..... .........+.. .........+...... ......+.+.+.. . .....+...+... ..+..
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (302)
T 1mj5_A 138 IEWADFPEQDRDLFQAFRSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTP 217 (302)
T ss_dssp BCGGGSCGGGHHHHHHHHSTTHHHHHTTTCHHHHTHHHHTSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBS
T ss_pred hhhhhhhHHHHHHHHHHhccchhhhhcChHHHHHHHHHhcCcccCCHHHHHHHHHHhhcccccccchHHHHHhccccccc
Confidence 11000 000000000000 0000000000000000 0000011110000 0 0000000000000 00000
Q ss_pred CHHHHH-HhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHH
Q 008093 338 TVDTYY-RNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNE 416 (578)
Q Consensus 338 ~~~~yy-~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~e 416 (578)
..+. ........+.++++|+|+|+|++|+++|.+.... .....++ ++.++ ++||+.++|. +..+.+.|.+
T Consensus 218 --~~~~~~~~~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~-~~~~~~~-~~~~~-~~gH~~~~e~----p~~~~~~i~~ 288 (302)
T 1mj5_A 218 --ADVVAIARDYAGWLSESPIPKLFINAEPGALTTGRMRDF-CRTWPNQ-TEITV-AGAHFIQEDS----PDEIGAAIAA 288 (302)
T ss_dssp --HHHHHHHHHHHHHHTTCCSCEEEEEEEECSSSSHHHHHH-HTTCSSE-EEEEE-EESSCGGGTC----HHHHHHHHHH
T ss_pred --hhhHHHHHHHHhhhhccCCCeEEEEeCCCCCCChHHHHH-HHHhcCC-ceEEe-cCcCcccccC----HHHHHHHHHH
Confidence 0000 0001234578899999999999999999764433 4455677 88889 9999998883 3358999999
Q ss_pred HHHhhcCC
Q 008093 417 YLGVLHSS 424 (578)
Q Consensus 417 FL~~~~~~ 424 (578)
|++.....
T Consensus 289 fl~~~~~~ 296 (302)
T 1mj5_A 289 FVRRLRPA 296 (302)
T ss_dssp HHHHHSCC
T ss_pred HHHhhccc
Confidence 99876543
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=99.85 E-value=4.4e-21 Score=188.82 Aligned_cols=229 Identities=13% Similarity=0.094 Sum_probs=133.9
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEE
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAI 238 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lv 238 (578)
++|+||++||+++++ ..| ..++..|.+ +|+|+++|+||||.|+..........+.+|+.++++++ +..+++++
T Consensus 20 ~~~~vv~lHG~~~~~-~~~-~~~~~~L~~-~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~l----~~~~~~lv 92 (264)
T 3ibt_A 20 HAPTLFLLSGWCQDH-RLF-KNLAPLLAR-DFHVICPDWRGHDAKQTDSGDFDSQTLAQDLLAFIDAK----GIRDFQMV 92 (264)
T ss_dssp SSCEEEEECCTTCCG-GGG-TTHHHHHTT-TSEEEEECCTTCSTTCCCCSCCCHHHHHHHHHHHHHHT----TCCSEEEE
T ss_pred CCCeEEEEcCCCCcH-hHH-HHHHHHHHh-cCcEEEEccccCCCCCCCccccCHHHHHHHHHHHHHhc----CCCceEEE
Confidence 467899999996544 445 677888855 69999999999999986532222233445555555544 45689999
Q ss_pred EEchHHHHHHHHHhhc-CCCCCccEEEEEcCCcchhhhhHHHhhHHHHHH-----HHHHHHHhHHHHHhhhcccccccCC
Q 008093 239 GTSIGANILVKYLGEE-GEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKI-----YDRALTIGLQDYAQLHEPRYSRLAN 312 (578)
Q Consensus 239 GhSmGG~ial~ya~~~-p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~-----~~~~l~~~l~~~~~~~~~~l~~~~d 312 (578)
||||||.+++.+|.++ |+ +|+++|+++++... ...... .+ ... +.......+..+... ..+
T Consensus 93 GhS~Gg~ia~~~a~~~~p~--~v~~lvl~~~~~~~--~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 159 (264)
T 3ibt_A 93 STSHGCWVNIDVCEQLGAA--RLPKTIIIDWLLQP--HPGFWQ-QL-AEGQHPTEYVAGRQSFFDEWAET-------TDN 159 (264)
T ss_dssp EETTHHHHHHHHHHHSCTT--TSCEEEEESCCSSC--CHHHHH-HH-HHTTCTTTHHHHHHHHHHHHHTT-------CCC
T ss_pred ecchhHHHHHHHHHhhChh--hhheEEEecCCCCc--Chhhcc-hh-hcccChhhHHHHHHHHHHHhccc-------CCc
Confidence 9999999999999999 88 89999999987611 111100 00 000 000000000010000 000
Q ss_pred HHH---H---hccCCHHHHHhhhhhccCCCCCH-HHHHHhCCcccccCCCccceEEEEeCCCCCCC--CCCcchHHHhcC
Q 008093 313 WEG---I---KKSRSIRDFDSHATCLVGKFETV-DTYYRNCSSSTYVGNVSIPLLCISSLDDPVCT--VEAIPWDECRAN 383 (578)
Q Consensus 313 ~~~---i---~~~~s~~efd~~~~~~~~g~~~~-~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp--~~~~~~~~~~~~ 383 (578)
... + ........+.... ... ..+.........+.+|++|+|+|+|..|+..+ .+.. .......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~~~~~~~~~~~~-~~~~~~~ 231 (264)
T 3ibt_A 160 ADVLNHLRNEMPWFHGEMWQRAC-------REIEANYRTWGSPLDRMDSLPQKPEICHIYSQPLSQDYRQLQ-LEFAAGH 231 (264)
T ss_dssp HHHHHHHHHTGGGSCHHHHHHHH-------HHHHHHHHHHSSHHHHHHTCSSCCEEEEEECCSCCHHHHHHH-HHHHHHC
T ss_pred HHHHHHHHHhhhhccchhHHHHH-------HHhccchhhccchhhcccccCCCeEEEEecCCccchhhHHHH-HHHHHhC
Confidence 000 0 0000000011000 000 11111122336678999999999765444332 3222 2345677
Q ss_pred CCEEEEEeCCCCccccccccccCcccHHHHHHHHHH
Q 008093 384 KNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 384 ~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
++.++.+++++||+.+.|. | ..+.+.|.+||+
T Consensus 232 ~~~~~~~i~~~gH~~~~e~--p--~~~~~~i~~fl~ 263 (264)
T 3ibt_A 232 SWFHPRHIPGRTHFPSLEN--P--VAVAQAIREFLQ 263 (264)
T ss_dssp TTEEEEECCCSSSCHHHHC--H--HHHHHHHHHHTC
T ss_pred CCceEEEcCCCCCcchhhC--H--HHHHHHHHHHHh
Confidence 8999999999999999883 3 358889999975
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=2.8e-21 Score=193.11 Aligned_cols=239 Identities=12% Similarity=0.112 Sum_probs=138.4
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCC---CCCCC-CCchHHHHHHHHHHHHHCCCCcE
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITS---DCFYN-AGWTEDAREVIGYLHHEYPKAPL 235 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~---~~~~~-~~~~~Dl~~~i~~l~~~~~~~~i 235 (578)
+|+||++||+++ +...| ..++..|.+ +|+|+++|+||||.|+... ...++ ..+.+|+.++++.+ +..++
T Consensus 20 ~~~vvllHG~~~-~~~~w-~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l----~~~~~ 92 (271)
T 1wom_A 20 KASIMFAPGFGC-DQSVW-NAVAPAFEE-DHRVILFDYVGSGHSDLRAYDLNRYQTLDGYAQDVLDVCEAL----DLKET 92 (271)
T ss_dssp SSEEEEECCTTC-CGGGG-TTTGGGGTT-TSEEEECCCSCCSSSCCTTCCTTGGGSHHHHHHHHHHHHHHT----TCSCE
T ss_pred CCcEEEEcCCCC-chhhH-HHHHHHHHh-cCeEEEECCCCCCCCCCCcccccccccHHHHHHHHHHHHHHc----CCCCe
Confidence 478999999955 45455 667777765 7999999999999997542 11112 23446666666544 34689
Q ss_pred EEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhh-H---HHhhHHHHHHHHHHHHHhHHHHHhhhcccccc-c
Q 008093 236 FAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGD-R---FIGRRLIQKIYDRALTIGLQDYAQLHEPRYSR-L 310 (578)
Q Consensus 236 ~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~-~---~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~-~ 310 (578)
+++||||||.+++.+|.++|+ +|+++|++++........ . .+.......+... +............+.... .
T Consensus 93 ~lvGhS~GG~va~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 169 (271)
T 1wom_A 93 VFVGHSVGALIGMLASIRRPE--LFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLEM-MEKNYIGWATVFAATVLNQP 169 (271)
T ss_dssp EEEEETHHHHHHHHHHHHCGG--GEEEEEEESCCSCCBEETTTEECSBCHHHHHHHHHH-HHHCHHHHHHHHHHHHHCCT
T ss_pred EEEEeCHHHHHHHHHHHhCHH--hhcceEEEcCCCcCCCCCchhccCCCHHHHHHHHHH-HhhhHHHHHHHHHHHHhcCC
Confidence 999999999999999999998 899999998742110000 0 0000000011100 000000000000000000 0
Q ss_pred CCHHHHhccCCHHHHHhhhhhccCCCCCHHHH---HHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEE
Q 008093 311 ANWEGIKKSRSIRDFDSHATCLVGKFETVDTY---YRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVV 387 (578)
Q Consensus 311 ~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~y---y~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~ 387 (578)
..... ...+...+... .......+ .........+.+|++|+|+|+|++|+++|.+.... ..+..++.+
T Consensus 170 ~~~~~------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~-~~~~~~~~~ 240 (271)
T 1wom_A 170 DRPEI------KEELESRFCST--DPVIARQFAKAAFFSDHREDLSKVTVPSLILQCADDIIAPATVGKY-MHQHLPYSS 240 (271)
T ss_dssp TCHHH------HHHHHHHHHHS--CHHHHHHHHHHHHSCCCHHHHTTCCSCEEEEEEETCSSSCHHHHHH-HHHHSSSEE
T ss_pred CchHH------HHHHHHHHhcC--CcHHHHHHHHHHhCcchHHhccccCCCEEEEEcCCCCcCCHHHHHH-HHHHCCCCE
Confidence 00000 00011000000 00000000 01122334678899999999999999998765433 455678899
Q ss_pred EEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 388 LATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 388 l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
+.+++++||+.++|. | ..+.+.|.+|+++.
T Consensus 241 ~~~i~~~gH~~~~e~--p--~~~~~~i~~fl~~~ 270 (271)
T 1wom_A 241 LKQMEARGHCPHMSH--P--DETIQLIGDYLKAH 270 (271)
T ss_dssp EEEEEEESSCHHHHC--H--HHHHHHHHHHHHHH
T ss_pred EEEeCCCCcCccccC--H--HHHHHHHHHHHHhc
Confidence 999999999999983 3 35889999999753
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=6e-21 Score=198.87 Aligned_cols=126 Identities=22% Similarity=0.311 Sum_probs=92.2
Q ss_pred eEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCC
Q 008093 121 RRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGL 200 (578)
Q Consensus 121 ~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~ 200 (578)
+...++ .||.++.+....++ +.++|+||++||+++ +...| ..++..|.++||+|+++|+|||
T Consensus 4 ~~~~~~-~~g~~l~y~~~G~~---------------~~~~~~vv~~hG~~~-~~~~~-~~~~~~l~~~g~~vi~~d~~g~ 65 (356)
T 2e3j_A 4 VHRILN-CRGTRIHAVADSPP---------------DQQGPLVVLLHGFPE-SWYSW-RHQIPALAGAGYRVVAIDQRGY 65 (356)
T ss_dssp CEEEEE-ETTEEEEEEEECCT---------------TCCSCEEEEECCTTC-CGGGG-TTTHHHHHHTTCEEEEECCTTS
T ss_pred eEEEEc-cCCeEEEEEEecCC---------------CCCCCEEEEECCCCC-cHHHH-HHHHHHHHHcCCEEEEEcCCCC
Confidence 334444 57888877654331 135688999999965 44445 6788889888999999999999
Q ss_pred CCCCCCCCC-CCC-CCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 201 GGVSITSDC-FYN-AGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 201 G~S~~~~~~-~~~-~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
|.|...... .+. ..+.+|+.++++++ +..+++++||||||.+++.++..+++ +|+++|+++++.
T Consensus 66 g~s~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~l~G~S~Gg~~a~~~a~~~p~--~v~~lvl~~~~~ 131 (356)
T 2e3j_A 66 GRSSKYRVQKAYRIKELVGDVVGVLDSY----GAEQAFVVGHDWGAPVAWTFAWLHPD--RCAGVVGISVPF 131 (356)
T ss_dssp TTSCCCCSGGGGSHHHHHHHHHHHHHHT----TCSCEEEEEETTHHHHHHHHHHHCGG--GEEEEEEESSCC
T ss_pred CCCCCCCcccccCHHHHHHHHHHHHHHc----CCCCeEEEEECHhHHHHHHHHHhCcH--hhcEEEEECCcc
Confidence 998754321 121 23345555555544 45689999999999999999999988 899999999876
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=99.85 E-value=5.9e-21 Score=193.60 Aligned_cols=238 Identities=16% Similarity=0.134 Sum_probs=135.1
Q ss_pred CcEEEEECCCCC--CCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCC-CCchHHHHHHHHHHHHHCCC-CcE
Q 008093 160 TPIAIVIPGLTS--DSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN-AGWTEDAREVIGYLHHEYPK-APL 235 (578)
Q Consensus 160 ~PiVVllHGl~G--~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~-~~~~~Dl~~~i~~l~~~~~~-~~i 235 (578)
+|+|||+||+++ ++...| ..++..|.+. |+|+++|+||||.|+ .....++ ..+.+|+.++++. .+. .++
T Consensus 36 g~~vvllHG~~~~~~~~~~~-~~~~~~L~~~-~~vi~~Dl~G~G~S~-~~~~~~~~~~~~~dl~~~l~~----l~~~~~~ 108 (296)
T 1j1i_A 36 GQPVILIHGGGAGAESEGNW-RNVIPILARH-YRVIAMDMLGFGKTA-KPDIEYTQDRRIRHLHDFIKA----MNFDGKV 108 (296)
T ss_dssp SSEEEEECCCSTTCCHHHHH-TTTHHHHTTT-SEEEEECCTTSTTSC-CCSSCCCHHHHHHHHHHHHHH----SCCSSCE
T ss_pred CCeEEEECCCCCCcchHHHH-HHHHHHHhhc-CEEEEECCCCCCCCC-CCCCCCCHHHHHHHHHHHHHh----cCCCCCe
Confidence 467999999852 233344 6677777664 999999999999998 4331222 2334555555543 334 689
Q ss_pred EEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHH-HHHHhHHHHHhhhcccccccCCHH
Q 008093 236 FAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDR-ALTIGLQDYAQLHEPRYSRLANWE 314 (578)
Q Consensus 236 ~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~-~l~~~l~~~~~~~~~~l~~~~d~~ 314 (578)
+++||||||.+++.+|.++|+ +|+++|+++++.........+. ..... .....+.......... ......+
T Consensus 109 ~lvGhS~Gg~ia~~~A~~~p~--~v~~lvl~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 180 (296)
T 1j1i_A 109 SIVGNSMGGATGLGVSVLHSE--LVNALVLMGSAGLVVEIHEDLR-----PIINYDFTREGMVHLVKALTND-GFKIDDA 180 (296)
T ss_dssp EEEEEHHHHHHHHHHHHHCGG--GEEEEEEESCCBCCCC---------------CCSCHHHHHHHHHHHSCT-TCCCCHH
T ss_pred EEEEEChhHHHHHHHHHhChH--hhhEEEEECCCCCCCCCCchHH-----HHhcccCCchHHHHHHHHhccC-cccccHH
Confidence 999999999999999999998 8999999987642211100000 00000 0000000000000000 0000000
Q ss_pred HHhccCCHHHH-HhhhhhccCCCCCHHHHHH----hCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEE
Q 008093 315 GIKKSRSIRDF-DSHATCLVGKFETVDTYYR----NCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLA 389 (578)
Q Consensus 315 ~i~~~~s~~ef-d~~~~~~~~g~~~~~~yy~----~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~ 389 (578)
.+.. . .... +... ...+......+. .......+.+|++|+|+|+|++|+++|.+.... .....++.+++
T Consensus 181 ~~~~-~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~~~~~~~~-~~~~~~~~~~~ 254 (296)
T 1j1i_A 181 MINS-R-YTYATDEAT---RKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVETAYK-FLDLIDDSWGY 254 (296)
T ss_dssp HHHH-H-HHHHHSHHH---HHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEETTCSSSCHHHHHH-HHHHCTTEEEE
T ss_pred HHHH-H-HHHhhCcch---hhHHHHHHHHHHhcccccccHHHhhcCCCCEEEEEECCCcccCHHHHHH-HHHHCCCCEEE
Confidence 0000 0 0000 0000 000000000000 001223578899999999999999999775443 45567889999
Q ss_pred EeCCCCccccccccccCcccHHHHHHHHHHhhc
Q 008093 390 TTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 390 ~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~ 422 (578)
+++++||+.++|. | ..+.+.|.+||+...
T Consensus 255 ~i~~~gH~~~~e~--p--~~~~~~i~~fl~~~~ 283 (296)
T 1j1i_A 255 IIPHCGHWAMIEH--P--EDFANATLSFLSLRV 283 (296)
T ss_dssp EESSCCSCHHHHS--H--HHHHHHHHHHHHHC-
T ss_pred EECCCCCCchhcC--H--HHHHHHHHHHHhccC
Confidence 9999999999983 3 368899999998643
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=4.3e-21 Score=195.19 Aligned_cols=127 Identities=14% Similarity=0.076 Sum_probs=88.1
Q ss_pred CCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeC
Q 008093 118 FSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 197 (578)
Q Consensus 118 ~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~ 197 (578)
.+++...+++.||..+.+.-..+ +..++||++||+.++....+ ....+...||+|+++|+
T Consensus 12 ~~~~~~~~~~~~g~~l~~~~~g~-----------------~~g~~vvllHG~~~~~~~~~---~~~~~~~~~~~vi~~D~ 71 (317)
T 1wm1_A 12 AAYDSGWLDTGDGHRIYWELSGN-----------------PNGKPAVFIHGGPGGGISPH---HRQLFDPERYKVLLFDQ 71 (317)
T ss_dssp CCSEEEEEECSSSCEEEEEEEEC-----------------TTSEEEEEECCTTTCCCCGG---GGGGSCTTTEEEEEECC
T ss_pred ccceeeEEEcCCCcEEEEEEcCC-----------------CCCCcEEEECCCCCcccchh---hhhhccccCCeEEEECC
Confidence 35567788888998887643321 23466899999866443222 22233357999999999
Q ss_pred CCCCCCCCCCC-CCCC-CCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 198 RGLGGVSITSD-CFYN-AGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 198 RG~G~S~~~~~-~~~~-~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
||||.|+.... ..+. ..+.+|+.+++ +..+..+++++||||||.+++.+|..+|+ +|+++|++++..
T Consensus 72 ~G~G~S~~~~~~~~~~~~~~~~dl~~l~----~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~ 140 (317)
T 1wm1_A 72 RGCGRSRPHASLDNNTTWHLVADIERLR----EMAGVEQWLVFGGSWGSTLALAYAQTHPE--RVSEMVLRGIFT 140 (317)
T ss_dssp TTSTTCBSTTCCTTCSHHHHHHHHHHHH----HHTTCSSEEEEEETHHHHHHHHHHHHCGG--GEEEEEEESCCC
T ss_pred CCCCCCCCCcccccccHHHHHHHHHHHH----HHcCCCcEEEEEeCHHHHHHHHHHHHCCh--heeeeeEeccCC
Confidence 99999964321 1111 12234444444 44456689999999999999999999998 899999998643
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A | Back alignment and structure |
|---|
Probab=99.85 E-value=6.5e-21 Score=190.17 Aligned_cols=240 Identities=11% Similarity=0.073 Sum_probs=137.1
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCC----CCCCCchHHHHHHHHHHHHHCCC-Cc
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDC----FYNAGWTEDAREVIGYLHHEYPK-AP 234 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~----~~~~~~~~Dl~~~i~~l~~~~~~-~~ 234 (578)
+|+||++||++++ ...| ..++..|.+ +|+|+++|+||||.|+..... .....+.+|+.++++++ +. .+
T Consensus 28 ~~~vv~lHG~~~~-~~~~-~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~ 100 (297)
T 2qvb_A 28 GDAIVFQHGNPTS-SYLW-RNIMPHLEG-LGRLVACDLIGMGASDKLSPSGPDRYSYGEQRDFLFALWDAL----DLGDH 100 (297)
T ss_dssp SSEEEEECCTTCC-GGGG-TTTGGGGTT-SSEEEEECCTTSTTSCCCSSCSTTSSCHHHHHHHHHHHHHHT----TCCSC
T ss_pred CCeEEEECCCCch-HHHH-HHHHHHHhh-cCeEEEEcCCCCCCCCCCCCccccCcCHHHHHHHHHHHHHHc----CCCCc
Confidence 4789999999654 4445 667777765 599999999999999755322 11123345555555544 44 68
Q ss_pred EEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhh---hHHHhhHHHHHHH---HHHHHHhHHHHHhhhcc-cc
Q 008093 235 LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIG---DRFIGRRLIQKIY---DRALTIGLQDYAQLHEP-RY 307 (578)
Q Consensus 235 i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~---~~~l~~~~~~~~~---~~~l~~~l~~~~~~~~~-~l 307 (578)
++++||||||.+++.++.++|+ +|+++|+++++...... .... ......+. ..........+...... ..
T Consensus 101 ~~lvG~S~Gg~~a~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (297)
T 2qvb_A 101 VVLVLHDWGSALGFDWANQHRD--RVQGIAFMEAIVTPMTWADWPPAV-RGVFQGFRSPQGEPMALEHNIFVERVLPGAI 177 (297)
T ss_dssp EEEEEEEHHHHHHHHHHHHSGG--GEEEEEEEEECCSCBCGGGSCGGG-HHHHHHHTSTTHHHHHHTTCHHHHTHHHHTC
T ss_pred eEEEEeCchHHHHHHHHHhChH--hhheeeEeccccCCccCCCCChHH-HHHHHHHhcccchhhhccccHHHHHHHhccc
Confidence 9999999999999999999988 89999999986532110 0000 00000000 00000000000000000 00
Q ss_pred cccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhC--------------CcccccCCCccceEEEEeCCCCCCCCC
Q 008093 308 SRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNC--------------SSSTYVGNVSIPLLCISSLDDPVCTVE 373 (578)
Q Consensus 308 ~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~--------------s~~~~l~~I~vPvLiI~g~dDpivp~~ 373 (578)
......+. +..+...+..+.........++... .....+.++++|+|+|+|++|+++|.+
T Consensus 178 ~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~ 251 (297)
T 2qvb_A 178 LRQLSDEE------MNHYRRPFVNGGEDRRPTLSWPRNLPIDGEPAEVVALVNEYRSWLEETDMPKLFINAEPGAIITGR 251 (297)
T ss_dssp SSCCCHHH------HHHHHGGGCSSSGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSCEEEEEEEECSSSCHH
T ss_pred cccCCHHH------HHHHHHHhcCcccchhhHHHHHHhccccCCchhhHHHHHHHHhhcccccccEEEEecCCCCcCCHH
Confidence 00001000 0001100000000000111111111 112456778999999999999999976
Q ss_pred CcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhc
Q 008093 374 AIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 374 ~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~ 422 (578)
.... ..+..++ ++.++ ++||+.++|. +..+.+.|.+||++..
T Consensus 252 ~~~~-~~~~~~~-~~~~~-~~gH~~~~~~----p~~~~~~i~~fl~~~~ 293 (297)
T 2qvb_A 252 IRDY-VRSWPNQ-TEITV-PGVHFVQEDS----PEEIGAAIAQFVRRLR 293 (297)
T ss_dssp HHHH-HHTSSSE-EEEEE-EESSCGGGTC----HHHHHHHHHHHHHHHH
T ss_pred HHHH-HHHHcCC-eEEEe-cCccchhhhC----HHHHHHHHHHHHHHHh
Confidence 5443 4456677 88889 9999998883 3358899999998763
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.5e-20 Score=194.56 Aligned_cols=250 Identities=14% Similarity=0.121 Sum_probs=146.1
Q ss_pred CCCcEEEEECCCCCCCccHHHH----------------HHHHHHHhCCceEEEEeCCCCCCCCCCCCC------CCC-CC
Q 008093 158 DTTPIAIVIPGLTSDSAASYIR----------------HLVFNTAKRGWNVVVSNHRGLGGVSITSDC------FYN-AG 214 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~----------------~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~------~~~-~~ 214 (578)
.++|+||++||+++ +...| . .++..|.++||+|+++|+||||.|...... .+. ..
T Consensus 48 ~~~~~vv~~hG~~~-~~~~~-~~~~w~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~ 125 (354)
T 2rau_A 48 GGNDAVLILPGTWS-SGEQL-VTISWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRTHYVPPFLKDRQLSFTANWGWST 125 (354)
T ss_dssp CCEEEEEEECCTTC-CHHHH-HHSEETTEECSCCCGGGCHHHHHHHTTEEEEEEECGGGGCCTTCCGGGGGGGTTCSHHH
T ss_pred CCCCEEEEECCCCC-Ccccc-ccccccccccccccchhhHHHHHHhCCCEEEEecCCCCCCCCcccccccccccCCcHHH
Confidence 34688999999965 44333 3 678889899999999999999999754331 111 34
Q ss_pred chHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhc-CCCCCccEEEEEcCC-cchhhhhHHH--hhHHHHHHHHH
Q 008093 215 WTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEE-GEKTPVAGAAAICSP-WDLLIGDRFI--GRRLIQKIYDR 290 (578)
Q Consensus 215 ~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~-p~~~~V~~~Vlis~p-~d~~~~~~~l--~~~~~~~~~~~ 290 (578)
..+|+.++++++..+.+..+++++||||||.+++.++.++ ++ +|+++|++++. .......... .......+...
T Consensus 126 ~~~d~~~~~~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (354)
T 2rau_A 126 WISDIKEVVSFIKRDSGQERIYLAGESFGGIAALNYSSLYWKN--DIKGLILLDGGPTKHGIRPKFYTPEVNSIEEMEAK 203 (354)
T ss_dssp HHHHHHHHHHHHHHHHCCSSEEEEEETHHHHHHHHHHHHHHHH--HEEEEEEESCSCBCTTCC--CCCCSCSSHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCceEEEEEECHhHHHHHHHHHhcCcc--ccceEEEecccccccCcccchhhhhhhhHHHhhhh
Confidence 4689999999998877778999999999999999999998 87 89999999653 3211000000 00000000000
Q ss_pred H---------HHHhH-HHHHhhhccccccc----CCH-HHHhc--------------cCCHHHHHhhhhhccCCCCCHHH
Q 008093 291 A---------LTIGL-QDYAQLHEPRYSRL----ANW-EGIKK--------------SRSIRDFDSHATCLVGKFETVDT 341 (578)
Q Consensus 291 ~---------l~~~l-~~~~~~~~~~l~~~----~d~-~~i~~--------------~~s~~efd~~~~~~~~g~~~~~~ 341 (578)
. +...+ .... ..+.+... ... +.+.. ......+....... .......
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 279 (354)
T 2rau_A 204 GIYVIPSRGGPNNPIWSYAL--ANPDMPSPDPKYKSISDFLMDSLYVTGSANPYDYPYSKKEDMFPILASF--DPYWPYR 279 (354)
T ss_dssp TCCEEECSSSTTCTHHHHHH--HSTTSCCSSTTSSSHHHHHHHHHHHTTSCCTTSTTCCCHHHHHHHHHTS--CSEEEHH
T ss_pred cccccCCCchhhhHHHHHhc--cccccCccccchhhHHHHHHHhhhccccCCcccCCCccHHHHHHHHhhh--ccccccc
Confidence 0 00000 0000 00000000 000 00000 00000111000000 0000111
Q ss_pred HHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 342 YYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 342 yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
.+...+....+.+|++|+|+|+|++|+++|.. . ....++.++++++++||+.+++.. ..+..+.+.|.+||++.
T Consensus 280 ~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p~~-~----~~l~~~~~~~~~~~~gH~~~~~~~-~~~~~~~~~i~~fl~~~ 353 (354)
T 2rau_A 280 LSLERDLKFDYEGILVPTIAFVSERFGIQIFD-S----KILPSNSEIILLKGYGHLDVYTGE-NSEKDVNSVVLKWLSQQ 353 (354)
T ss_dssp HHHTTTCCCCCTTCCCCEEEEEETTTHHHHBC-G----GGSCTTCEEEEETTCCGGGGTSST-THHHHTHHHHHHHHHHH
T ss_pred cccCcccccccccCCCCEEEEecCCCCCCccc-h----hhhccCceEEEcCCCCCchhhcCC-CcHHHHHHHHHHHHHhc
Confidence 22233455678899999999999999987743 2 223467899999999999988741 11246889999999864
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=99.85 E-value=6.7e-22 Score=191.31 Aligned_cols=224 Identities=12% Similarity=0.103 Sum_probs=133.3
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCC-CCchHHHHHHHHHHH--HHCCCCc
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN-AGWTEDAREVIGYLH--HEYPKAP 234 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~-~~~~~Dl~~~i~~l~--~~~~~~~ 234 (578)
+++|+||++||+++ +...| . .+..+. +||+|+++|+||||.|+.. ..+. ..+.+|+.+++++.. +..+ +
T Consensus 14 ~~~~~vv~~hG~~~-~~~~~-~-~~~~l~-~g~~v~~~d~~g~g~s~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 85 (245)
T 3e0x_A 14 KSPNTLLFVHGSGC-NLKIF-G-ELEKYL-EDYNCILLDLKGHGESKGQ--CPSTVYGYIDNVANFITNSEVTKHQK--N 85 (245)
T ss_dssp TCSCEEEEECCTTC-CGGGG-T-TGGGGC-TTSEEEEECCTTSTTCCSC--CCSSHHHHHHHHHHHHHHCTTTTTCS--C
T ss_pred CCCCEEEEEeCCcc-cHHHH-H-HHHHHH-hCCEEEEecCCCCCCCCCC--CCcCHHHHHHHHHHHHHhhhhHhhcC--c
Confidence 35789999999965 44455 4 555665 7999999999999999732 2222 233455555552111 3333 8
Q ss_pred EEEEEEchHHHHHHHHHhh-cCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCH
Q 008093 235 LFAIGTSIGANILVKYLGE-EGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANW 313 (578)
Q Consensus 235 i~lvGhSmGG~ial~ya~~-~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~ 313 (578)
++++||||||.+++.++.+ +++ ++++|+++++.............+........+.. ...+ .....
T Consensus 86 ~~l~G~S~Gg~~a~~~a~~~~p~---v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~---~~~~~ 152 (245)
T 3e0x_A 86 ITLIGYSMGGAIVLGVALKKLPN---VRKVVSLSGGARFDKLDKDFMEKIYHNQLDNNYLL-------ECIG---GIDNP 152 (245)
T ss_dssp EEEEEETHHHHHHHHHHTTTCTT---EEEEEEESCCSBCTTSCHHHHHHHHTTCCCHHHHH-------HHHT---CSCSH
T ss_pred eEEEEeChhHHHHHHHHHHhCcc---ccEEEEecCCCccccccHHHHHHHHHHHHHhhcCc-------cccc---ccchH
Confidence 9999999999999999999 876 99999999877653221111111000000000000 0000 00000
Q ss_pred H--HH-hc-cCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEE
Q 008093 314 E--GI-KK-SRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLA 389 (578)
Q Consensus 314 ~--~i-~~-~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~ 389 (578)
. .. .. ......+.. ........+....+.++++|+|+++|++|+++|.+.... .....+++++.
T Consensus 153 ~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~-~~~~~~~~~~~ 220 (245)
T 3e0x_A 153 LSEKYFETLEKDPDIMIN-----------DLIACKLIDLVDNLKNIDIPVKAIVAKDELLTLVEYSEI-IKKEVENSELK 220 (245)
T ss_dssp HHHHHHTTSCSSHHHHHH-----------HHHHHHHCBCGGGGGGCCSCEEEEEETTCSSSCHHHHHH-HHHHSSSEEEE
T ss_pred HHHHHHHHHhcCcHHHHH-----------HHHHhccccHHHHHHhCCCCEEEEEeCCCCCCCHHHHHH-HHHHcCCceEE
Confidence 0 00 00 000000000 001112234456678899999999999999999775443 45567889999
Q ss_pred EeCCCCccccccccccCcccHHHHHHHHH
Q 008093 390 TTWHGGHLAFFEGLTAAGMWWVRAVNEYL 418 (578)
Q Consensus 390 ~~~~GGH~~~~eg~~~~~~w~~~~v~eFL 418 (578)
+++++||..+.+. +..+.+.+.+||
T Consensus 221 ~~~~~gH~~~~~~----~~~~~~~i~~fl 245 (245)
T 3e0x_A 221 IFETGKHFLLVVN----AKGVAEEIKNFI 245 (245)
T ss_dssp EESSCGGGHHHHT----HHHHHHHHHTTC
T ss_pred EeCCCCcceEEec----HHHHHHHHHhhC
Confidence 9999999988872 224666766663
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.7e-20 Score=187.08 Aligned_cols=241 Identities=12% Similarity=0.043 Sum_probs=135.4
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCC-CCchHHHHHHHHHHHHHCCCCcEE
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN-AGWTEDAREVIGYLHHEYPKAPLF 236 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~-~~~~~Dl~~~i~~l~~~~~~~~i~ 236 (578)
..+|+|||+||+++ +...| +.++..|.++||+|+++|+||||.|+......++ ..+.+|+.++++.+. ...+++
T Consensus 8 ~~g~~vvllHG~~~-~~~~w-~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~---~~~~~~ 82 (264)
T 2wfl_A 8 KQQKHFVLVHGGCL-GAWIW-YKLKPLLESAGHKVTAVDLSAAGINPRRLDEIHTFRDYSEPLMEVMASIP---PDEKVV 82 (264)
T ss_dssp -CCCEEEEECCTTC-CGGGG-TTHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHHHHHHHHHHHSC---TTCCEE
T ss_pred CCCCeEEEECCCcc-ccchH-HHHHHHHHhCCCEEEEeecCCCCCCCCCcccccCHHHHHHHHHHHHHHhC---CCCCeE
Confidence 45678999999964 44445 7788999888999999999999999653222222 234456666655442 236899
Q ss_pred EEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccc--------c
Q 008093 237 AIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRY--------S 308 (578)
Q Consensus 237 lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l--------~ 308 (578)
+|||||||.+++.++.++|+ +|+++|++++......... ......+... +.. ..........+ .
T Consensus 83 lvGhSmGG~va~~~a~~~p~--~v~~lvl~~~~~~~~~~~~---~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~ 154 (264)
T 2wfl_A 83 LLGHSFGGMSLGLAMETYPE--KISVAVFMSAMMPDPNHSL---TYPFEKYNEK-CPA--DMMLDSQFSTYGNPENPGMS 154 (264)
T ss_dssp EEEETTHHHHHHHHHHHCGG--GEEEEEEESSCCCCTTSCT---THHHHHHHHH-SCT--TTTTTCEEEEESCTTSCEEE
T ss_pred EEEeChHHHHHHHHHHhChh--hhceeEEEeeccCCCCcch---hhHHHHhhhc-Ccc--hhhhhhhhhhccCCCCCcch
Confidence 99999999999999999998 8999999987431111000 0000011000 000 00000000000 0
Q ss_pred ccCCHHHHh----ccCCHHHH--HhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhc
Q 008093 309 RLANWEGIK----KSRSIRDF--DSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRA 382 (578)
Q Consensus 309 ~~~d~~~i~----~~~s~~ef--d~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~ 382 (578)
.......+. ........ ......+.. ..... +........-...++|+|+|+|++|+++|.+.... ..+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~-~~~~ 230 (264)
T 2wfl_A 155 MILGPQFMALKMFQNCSVEDLELAKMLTRPGS--LFFQD-LAKAKKFSTERYGSVKRAYIFCNEDKSFPVEFQKW-FVES 230 (264)
T ss_dssp EECCHHHHHHHTSTTSCHHHHHHHHHHCCCEE--CCHHH-HTTSCCCCTTTGGGSCEEEEEETTCSSSCHHHHHH-HHHH
T ss_pred hhhhHHHHHHHHhcCCCHHHHHHHHhccCCCc--ccccc-cccccccChHHhCCCCeEEEEeCCcCCCCHHHHHH-HHHh
Confidence 000000000 00000000 000000000 00111 10000110001137899999999999999775433 3445
Q ss_pred CCCEEEEEeCCCCccccccccccCcccHHHHHHHHHH
Q 008093 383 NKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 383 ~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
.++.++++++++||+.++|. | ..+.+.|.+|++
T Consensus 231 ~p~~~~~~i~~~gH~~~~e~--P--~~~~~~l~~f~~ 263 (264)
T 2wfl_A 231 VGADKVKEIKEADHMGMLSQ--P--REVCKCLLDISD 263 (264)
T ss_dssp HCCSEEEEETTCCSCHHHHS--H--HHHHHHHHHHHC
T ss_pred CCCceEEEeCCCCCchhhcC--H--HHHHHHHHHHhh
Confidence 67889999999999999993 3 358899999974
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 | Back alignment and structure |
|---|
Probab=99.84 E-value=6.7e-21 Score=189.75 Aligned_cols=235 Identities=12% Similarity=0.107 Sum_probs=128.5
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCC-cEEEE
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKA-PLFAI 238 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~-~i~lv 238 (578)
+|+||++||++++ ...| ..++..|.+.||+|+++|+||||.|+.... .....+.+|+.++++.+ .... +++++
T Consensus 16 ~~~vvllHG~~~~-~~~w-~~~~~~L~~~~~~vi~~Dl~GhG~S~~~~~-~~~~~~a~~l~~~l~~l---~~~~~p~~lv 89 (264)
T 1r3d_A 16 TPLVVLVHGLLGS-GADW-QPVLSHLARTQCAALTLDLPGHGTNPERHC-DNFAEAVEMIEQTVQAH---VTSEVPVILV 89 (264)
T ss_dssp BCEEEEECCTTCC-GGGG-HHHHHHHTTSSCEEEEECCTTCSSCC--------CHHHHHHHHHHHTT---CCTTSEEEEE
T ss_pred CCcEEEEcCCCCC-HHHH-HHHHHHhcccCceEEEecCCCCCCCCCCCc-cCHHHHHHHHHHHHHHh---CcCCCceEEE
Confidence 4889999999654 4455 678888876799999999999999975322 11123334554444433 2222 49999
Q ss_pred EEchHHHHHHH---HHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHH-HHHHHHHHHhHHHHHhhh-c-ccccccCC
Q 008093 239 GTSIGANILVK---YLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQ-KIYDRALTIGLQDYAQLH-E-PRYSRLAN 312 (578)
Q Consensus 239 GhSmGG~ial~---ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~-~~~~~~l~~~l~~~~~~~-~-~~l~~~~d 312 (578)
||||||.+++. ++.++|+ +|+++|+++++...........+.... ..........+....... . ..+.. .+
T Consensus 90 GhSmGG~va~~~~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 166 (264)
T 1r3d_A 90 GYSLGGRLIMHGLAQGAFSRL--NLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPIEHVLSDWYQQAVFSS-LN 166 (264)
T ss_dssp EETHHHHHHHHHHHHTTTTTS--EEEEEEEESCCCCCCSHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHTTSGGGTT-CC
T ss_pred EECHhHHHHHHHHHHHhhCcc--ccceEEEecCCCCCCChhhhhhhhcccHHHHHHhccccHHHHHHHHhhhhhhhc-cC
Confidence 99999999999 7778888 899999998754332111110000000 000000000011111000 0 00000 00
Q ss_pred HHHHhccCCHHHHHhhhhhccCCCCCHHHHHHh------CCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCE
Q 008093 313 WEGIKKSRSIRDFDSHATCLVGKFETVDTYYRN------CSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNV 386 (578)
Q Consensus 313 ~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~------~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~ 386 (578)
... ...+..... . ..-.....++.. ......+.+|++|+|+|+|++|+.++ ...... + .
T Consensus 167 ~~~------~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~~-~-~ 231 (264)
T 1r3d_A 167 HEQ------RQTLIAQRS-A-NLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKFQ-----QLAESS-G-L 231 (264)
T ss_dssp HHH------HHHHHHHHT-T-SCHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHHH-----HHHHHH-C-S
T ss_pred HHH------HHHHHHHHh-h-cchHHHHHHHHhhhhccCccHHHHHHhcCCCEEEEEECCCchHH-----HHHHHh-C-C
Confidence 000 000000000 0 000001111211 12234567899999999999998642 111111 2 5
Q ss_pred EEEEeCCCCccccccccccCcccHHHHHHHHHHhhc
Q 008093 387 VLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 387 ~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~ 422 (578)
.+.+++++||+.++|. | ..+.+.|.+|++++.
T Consensus 232 ~~~~i~~~gH~~~~e~--p--~~~~~~i~~fl~~~~ 263 (264)
T 1r3d_A 232 SYSQVAQAGHNVHHEQ--P--QAFAKIVQAMIHSII 263 (264)
T ss_dssp EEEEETTCCSCHHHHC--H--HHHHHHHHHHHHHHC
T ss_pred cEEEcCCCCCchhhcC--H--HHHHHHHHHHHHHhc
Confidence 6889999999999983 3 369999999998764
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.3e-20 Score=175.01 Aligned_cols=174 Identities=14% Similarity=0.093 Sum_probs=133.0
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEE
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFA 237 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~l 237 (578)
..+|+||++||++++...+....+++.+.++||+|+++|+||+|.|+... ......+++.++++++.+..+..++++
T Consensus 2 ~~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l 78 (176)
T 2qjw_A 2 MSRGHCILAHGFESGPDALKVTALAEVAERLGWTHERPDFTDLDARRDLG---QLGDVRGRLQRLLEIARAATEKGPVVL 78 (176)
T ss_dssp CSSCEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEECCCCHHHHTCGGGC---TTCCHHHHHHHHHHHHHHHHTTSCEEE
T ss_pred CCCcEEEEEeCCCCCccHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC---CCCCHHHHHHHHHHHHHhcCCCCCEEE
Confidence 35688999999976655544568899999999999999999999986321 223455778888888888776679999
Q ss_pred EEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHh
Q 008093 238 IGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIK 317 (578)
Q Consensus 238 vGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~ 317 (578)
+||||||.+++.++.+++ ++++|+++++.+....
T Consensus 79 ~G~S~Gg~~a~~~a~~~~----~~~~v~~~~~~~~~~~------------------------------------------ 112 (176)
T 2qjw_A 79 AGSSLGSYIAAQVSLQVP----TRALFLMVPPTKMGPL------------------------------------------ 112 (176)
T ss_dssp EEETHHHHHHHHHHTTSC----CSEEEEESCCSCBTTB------------------------------------------
T ss_pred EEECHHHHHHHHHHHhcC----hhheEEECCcCCcccc------------------------------------------
Confidence 999999999999998875 8899999877643100
Q ss_pred ccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCcc
Q 008093 318 KSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHL 397 (578)
Q Consensus 318 ~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~ 397 (578)
. .+.++++|+|+++|++|+++|.+......... +.++.++ ++||.
T Consensus 113 -------------------~-------------~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~-~~~H~ 157 (176)
T 2qjw_A 113 -------------------P-------------ALDAAAVPISIVHAWHDELIPAADVIAWAQAR--SARLLLV-DDGHR 157 (176)
T ss_dssp -------------------C-------------CCCCCSSCEEEEEETTCSSSCHHHHHHHHHHH--TCEEEEE-SSCTT
T ss_pred -------------------C-------------cccccCCCEEEEEcCCCCccCHHHHHHHHHhC--CceEEEe-CCCcc
Confidence 0 05678899999999999999987554433233 6778888 89998
Q ss_pred ccccccccCcccHHHHHHHHHHh
Q 008093 398 AFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 398 ~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
.. + ....+.+.+.+|+++
T Consensus 158 ~~-~----~~~~~~~~i~~fl~~ 175 (176)
T 2qjw_A 158 LG-A----HVQAASRAFAELLQS 175 (176)
T ss_dssp CT-T----CHHHHHHHHHHHHHT
T ss_pred cc-c----cHHHHHHHHHHHHHh
Confidence 62 3 233578888999875
|
| >1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.6e-20 Score=182.12 Aligned_cols=206 Identities=16% Similarity=0.049 Sum_probs=148.8
Q ss_pred EEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCC
Q 008093 123 QLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGG 202 (578)
Q Consensus 123 ~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~ 202 (578)
..+++.||..+...++.+.+ ..+|+||++||+.|+.. .| ..++..++++||.|+++|+||+|.
T Consensus 6 ~~~~~~~g~~l~~~~~~p~~---------------~~~p~vv~~hG~~~~~~-~~-~~~~~~l~~~g~~v~~~d~~g~g~ 68 (236)
T 1zi8_A 6 ISIQSYDGHTFGALVGSPAK---------------APAPVIVIAQDIFGVNA-FM-RETVSWLVDQGYAAVCPDLYARQA 68 (236)
T ss_dssp CCEECTTSCEECEEEECCSS---------------CSEEEEEEECCTTBSCH-HH-HHHHHHHHHTTCEEEEECGGGGTS
T ss_pred EEEecCCCCeEEEEEECCCC---------------CCCCEEEEEcCCCCCCH-HH-HHHHHHHHhCCcEEEeccccccCC
Confidence 34677899988877765532 45789999999966544 44 789999999999999999999998
Q ss_pred CCCCCCCC---------------CCCCchHHHHHHHHHHHHHCC-CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEE
Q 008093 203 VSITSDCF---------------YNAGWTEDAREVIGYLHHEYP-KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAI 266 (578)
Q Consensus 203 S~~~~~~~---------------~~~~~~~Dl~~~i~~l~~~~~-~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vli 266 (578)
+....... ......+|+.++++++.++.+ ..+++++||||||.+++.++..++ +++++++
T Consensus 69 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~----~~~~v~~ 144 (236)
T 1zi8_A 69 PGTALDPQDERQREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYSLGGALAFLVASKGY----VDRAVGY 144 (236)
T ss_dssp TTCBCCTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTSSTTEEEEEEEEEETHHHHHHHHHHHHTC----SSEEEEE
T ss_pred CcccccccchhhhhhhhhhhhccCcchhhHHHHHHHHHHHhccCCCCCEEEEEECcCHHHHHHHhccCC----ccEEEEe
Confidence 75421110 112235799999999987654 468999999999999999999876 8888887
Q ss_pred cCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhC
Q 008093 267 CSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNC 346 (578)
Q Consensus 267 s~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~ 346 (578)
++....
T Consensus 145 ~~~~~~-------------------------------------------------------------------------- 150 (236)
T 1zi8_A 145 YGVGLE-------------------------------------------------------------------------- 150 (236)
T ss_dssp SCSSGG--------------------------------------------------------------------------
T ss_pred cCcccc--------------------------------------------------------------------------
Confidence 654210
Q ss_pred CcccccCCCccceEEEEeCCCCCCCCCCcchHHH--hcCCCEEEEEeCCCCcccccccccc----CcccHHHHHHHHHHh
Q 008093 347 SSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDEC--RANKNVVLATTWHGGHLAFFEGLTA----AGMWWVRAVNEYLGV 420 (578)
Q Consensus 347 s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~--~~~~~~~l~~~~~GGH~~~~eg~~~----~~~w~~~~v~eFL~~ 420 (578)
+....+.++++|+|+++|++|+++|.+....... ...+++++.+++++||....+.... ....+.+.+.+||++
T Consensus 151 ~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 230 (236)
T 1zi8_A 151 KQLNKVPEVKHPALFHMGGQDHFVPAPSRQLITEGFGANPLLQVHWYEEAGHSFARTGSSGYVASAAALANERTLDFLVP 230 (236)
T ss_dssp GCGGGGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHTTCTTEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHGG
T ss_pred cchhhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCceEEEECCCCcccccCCCCccCHHHHHHHHHHHHHHHHH
Confidence 0123456678999999999999999775443222 2235899999999999766552100 012466889999987
Q ss_pred hcC
Q 008093 421 LHS 423 (578)
Q Consensus 421 ~~~ 423 (578)
...
T Consensus 231 ~l~ 233 (236)
T 1zi8_A 231 LQS 233 (236)
T ss_dssp GCC
T ss_pred hcC
Confidence 643
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.9e-20 Score=197.90 Aligned_cols=260 Identities=10% Similarity=0.044 Sum_probs=157.1
Q ss_pred CCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeC
Q 008093 118 FSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 197 (578)
Q Consensus 118 ~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~ 197 (578)
.+.++..++. +|..+...++.+ . ++..|+||++||+.+ +...|...+...+.++||+|+++|+
T Consensus 133 ~~~~~~~i~~-~~~~l~~~~~~~-~--------------~~~~p~vv~~HG~~~-~~~~~~~~~~~~~~~~g~~vi~~D~ 195 (405)
T 3fnb_A 133 IPLKSIEVPF-EGELLPGYAIIS-E--------------DKAQDTLIVVGGGDT-SREDLFYMLGYSGWEHDYNVLMVDL 195 (405)
T ss_dssp CCCEEEEEEE-TTEEEEEEEECC-S--------------SSCCCEEEEECCSSC-CHHHHHHHTHHHHHHTTCEEEEECC
T ss_pred CCcEEEEEeE-CCeEEEEEEEcC-C--------------CCCCCEEEEECCCCC-CHHHHHHHHHHHHHhCCcEEEEEcC
Confidence 4556777776 677777655532 2 244589999999955 4444434445566788999999999
Q ss_pred CCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhH
Q 008093 198 RGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDR 277 (578)
Q Consensus 198 RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~ 277 (578)
||+|.|+.. ...+...+.+|+.++++++.... .+++++||||||.+++.++..+| +++++|++++..+......
T Consensus 196 ~G~G~s~~~-~~~~~~~~~~d~~~~~~~l~~~~--~~v~l~G~S~GG~~a~~~a~~~p---~v~~~v~~~p~~~~~~~~~ 269 (405)
T 3fnb_A 196 PGQGKNPNQ-GLHFEVDARAAISAILDWYQAPT--EKIAIAGFSGGGYFTAQAVEKDK---RIKAWIASTPIYDVAEVFR 269 (405)
T ss_dssp TTSTTGGGG-TCCCCSCTHHHHHHHHHHCCCSS--SCEEEEEETTHHHHHHHHHTTCT---TCCEEEEESCCSCHHHHHH
T ss_pred CCCcCCCCC-CCCCCccHHHHHHHHHHHHHhcC--CCEEEEEEChhHHHHHHHHhcCc---CeEEEEEecCcCCHHHHHH
Confidence 999998543 22334466799999999998654 68999999999999999998876 5999999998887643211
Q ss_pred HHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHH----HHHHhCCcccccC
Q 008093 278 FIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVD----TYYRNCSSSTYVG 353 (578)
Q Consensus 278 ~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~----~yy~~~s~~~~l~ 353 (578)
....... .. ...+...+.... . ..+.. ....+... . ...+..... .+... .....+.
T Consensus 270 ~~~~~~~-~~-p~~~~~~~~~~~----~----~~~~~------~~~~~~~~-~-~~~~~~~~~~~~~~~~~~-~~~~~l~ 330 (405)
T 3fnb_A 270 ISFSTAL-KA-PKTILKWGSKLV----T----SVNKV------AEVNLNKY-A-WQFGQVDFITSVNEVLEQ-AQIVDYN 330 (405)
T ss_dssp HHCC----------------------------CCCHH------HHHHHHHH-H-HHHTSSSHHHHHHHHHHH-CCCCCGG
T ss_pred Hhhhhhh-hC-cHHHHHHHHHHh----h----ccchh------HHHHHHHh-h-hhcCCCCHHHHHHHHHHh-hcccCHh
Confidence 1000000 00 000000000000 0 00000 00000000 0 011222221 22222 2233478
Q ss_pred CCccceEEEEeCCCCCCCCCCcchH---HHhcCCCEEEEEe---CCCCccccccccccCcccHHHHHHHHHHhhcC
Q 008093 354 NVSIPLLCISSLDDPVCTVEAIPWD---ECRANKNVVLATT---WHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHS 423 (578)
Q Consensus 354 ~I~vPvLiI~g~dDpivp~~~~~~~---~~~~~~~~~l~~~---~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~ 423 (578)
+|++|+|+++|++|+++|.+..... .....+++++.++ +++||....+ ....+.+.|.+||++...
T Consensus 331 ~i~~PvLii~G~~D~~v~~~~~~~l~~~l~~~~~~~~l~~~~~~~h~gh~~~~~----~~~~~~~~i~~fL~~~l~ 402 (405)
T 3fnb_A 331 KIDVPSLFLVGAGEDSELMRQSQVLYDNFKQRGIDVTLRKFSSESGADAHCQVN----NFRLMHYQVFEWLNHIFK 402 (405)
T ss_dssp GCCSCEEEEEETTSCHHHHHHHHHHHHHHHHTTCCEEEEEECTTTTCCSGGGGG----GHHHHHHHHHHHHHHHHC
T ss_pred hCCCCEEEEecCCCcCCChHHHHHHHHHhccCCCCceEEEEcCCccchhccccc----hHHHHHHHHHHHHHHHhC
Confidence 8999999999999999887643322 2223567889999 5555555444 234688999999998764
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} | Back alignment and structure |
|---|
Probab=99.84 E-value=8e-21 Score=196.81 Aligned_cols=244 Identities=16% Similarity=0.149 Sum_probs=156.7
Q ss_pred CCCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEe
Q 008093 117 CFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSN 196 (578)
Q Consensus 117 ~~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D 196 (578)
.+.+++..+...||..+...++.|.+ ....|+||++||++++... | ..+. .+.+.||+|+++|
T Consensus 79 ~~~~~~~~~~~~~g~~l~~~~~~P~~--------------~~~~p~vv~~HG~g~~~~~-~-~~~~-~~~~~G~~v~~~D 141 (346)
T 3fcy_A 79 FAECYDLYFTGVRGARIHAKYIKPKT--------------EGKHPALIRFHGYSSNSGD-W-NDKL-NYVAAGFTVVAMD 141 (346)
T ss_dssp TEEEEEEEEECGGGCEEEEEEEEESC--------------SSCEEEEEEECCTTCCSCC-S-GGGH-HHHTTTCEEEEEC
T ss_pred ceEEEEEEEEcCCCCEEEEEEEecCC--------------CCCcCEEEEECCCCCCCCC-h-hhhh-HHHhCCcEEEEEc
Confidence 34556677888899999988887643 2467999999999765544 3 2333 5568899999999
Q ss_pred CCCCCCCCCCCCCCC--------------------CCCchHHHHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhhc
Q 008093 197 HRGLGGVSITSDCFY--------------------NAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEE 254 (578)
Q Consensus 197 ~RG~G~S~~~~~~~~--------------------~~~~~~Dl~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~ 254 (578)
+||+|.+........ .....+|+.++++++.... +..+++++||||||.+++.++..+
T Consensus 142 ~rG~g~s~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~ 221 (346)
T 3fcy_A 142 VRGQGGQSQDVGGVTGNTLNGHIIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALE 221 (346)
T ss_dssp CTTSSSSCCCCCCCSSCCSBCSSSTTTTSCGGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHS
T ss_pred CCCCCCCCCCCcccCCCCcCcceeccccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhC
Confidence 999998865432110 0012478999999987654 346899999999999999999998
Q ss_pred CCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccC
Q 008093 255 GEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVG 334 (578)
Q Consensus 255 p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~ 334 (578)
++ |+++|++++.............. ...+ ..+..+.....+. .....++..
T Consensus 222 p~---v~~~vl~~p~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~~~------------~~~~~~~~~------- 272 (346)
T 3fcy_A 222 PR---VRKVVSEYPFLSDYKRVWDLDLA--KNAY-----QEITDYFRLFDPR------------HERENEVFT------- 272 (346)
T ss_dssp TT---CCEEEEESCSSCCHHHHHHTTCC--CGGG-----HHHHHHHHHHCTT------------CTTHHHHHH-------
T ss_pred cc---ccEEEECCCcccCHHHHhhcccc--ccch-----HHHHHHHHhcCCC------------cchHHHHHH-------
Confidence 76 99999998765422110000000 0000 0000111100000 000001000
Q ss_pred CCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHH
Q 008093 335 KFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAV 414 (578)
Q Consensus 335 g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v 414 (578)
.+...+....+.++++|+|+++|++|+++|.+...........++++.+++++||..+ + .+.+.+
T Consensus 273 -------~~~~~d~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~-------~~~~~i 337 (346)
T 3fcy_A 273 -------KLGYIDVKNLAKRIKGDVLMCVGLMDQVCPPSTVFAAYNNIQSKKDIKVYPDYGHEPM-R-------GFGDLA 337 (346)
T ss_dssp -------HHGGGCHHHHGGGCCSEEEEEEETTCSSSCHHHHHHHHTTCCSSEEEEEETTCCSSCC-T-------THHHHH
T ss_pred -------HhCcccHHHHHHhcCCCEEEEeeCCCCcCCHHHHHHHHHhcCCCcEEEEeCCCCCcCH-H-------HHHHHH
Confidence 0111123345678899999999999999998754433333334799999999999876 2 378899
Q ss_pred HHHHHhh
Q 008093 415 NEYLGVL 421 (578)
Q Consensus 415 ~eFL~~~ 421 (578)
.+||+++
T Consensus 338 ~~fl~~l 344 (346)
T 3fcy_A 338 MQFMLEL 344 (346)
T ss_dssp HHHHHTT
T ss_pred HHHHHHh
Confidence 9999875
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 | Back alignment and structure |
|---|
Probab=99.84 E-value=5.1e-20 Score=186.82 Aligned_cols=127 Identities=11% Similarity=0.104 Sum_probs=88.8
Q ss_pred CCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeC
Q 008093 118 FSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 197 (578)
Q Consensus 118 ~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~ 197 (578)
.+++...++..||..+.+....+ +..|+||++||+.|+....+ +...+...||+|+++|+
T Consensus 9 ~~~~~~~~~~~~g~~l~y~~~G~-----------------~~g~pvvllHG~~~~~~~~~---~~~~~~~~~~~vi~~D~ 68 (313)
T 1azw_A 9 TPYQQGSLKVDDRHTLYFEQCGN-----------------PHGKPVVMLHGGPGGGCNDK---MRRFHDPAKYRIVLFDQ 68 (313)
T ss_dssp CCSEEEEEECSSSCEEEEEEEEC-----------------TTSEEEEEECSTTTTCCCGG---GGGGSCTTTEEEEEECC
T ss_pred CccccceEEcCCCCEEEEEecCC-----------------CCCCeEEEECCCCCccccHH---HHHhcCcCcceEEEECC
Confidence 35677888888998887653321 23466899999866443222 22333357999999999
Q ss_pred CCCCCCCCCCC-CCCC-CCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 198 RGLGGVSITSD-CFYN-AGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 198 RG~G~S~~~~~-~~~~-~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
||||.|+.... ..+. ....+|+.++++ ..+..+++++||||||.+++.+|.++|+ +|+++|++++..
T Consensus 69 ~G~G~S~~~~~~~~~~~~~~~~dl~~l~~----~l~~~~~~lvGhSmGg~ia~~~a~~~p~--~v~~lvl~~~~~ 137 (313)
T 1azw_A 69 RGSGRSTPHADLVDNTTWDLVADIERLRT----HLGVDRWQVFGGSWGSTLALAYAQTHPQ--QVTELVLRGIFL 137 (313)
T ss_dssp TTSTTSBSTTCCTTCCHHHHHHHHHHHHH----HTTCSSEEEEEETHHHHHHHHHHHHCGG--GEEEEEEESCCC
T ss_pred CCCcCCCCCcccccccHHHHHHHHHHHHH----HhCCCceEEEEECHHHHHHHHHHHhChh--heeEEEEecccc
Confidence 99999974321 1111 123345555444 4455689999999999999999999998 899999987643
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=3.5e-20 Score=186.08 Aligned_cols=240 Identities=12% Similarity=0.031 Sum_probs=135.3
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCC-CCchHHHHHHHHHHHHHCC-CCcEEE
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN-AGWTEDAREVIGYLHHEYP-KAPLFA 237 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~-~~~~~Dl~~~i~~l~~~~~-~~~i~l 237 (578)
+|+|||+||+++ +...| +.++..|.+.||+|+++|+||||.|+......++ ..+.+|+.++++. .+ ..++++
T Consensus 4 ~~~vvllHG~~~-~~~~w-~~~~~~L~~~g~rVia~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~----l~~~~~~~l 77 (273)
T 1xkl_A 4 GKHFVLVHGACH-GGWSW-YKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPLMELMES----LSADEKVIL 77 (273)
T ss_dssp CCEEEEECCTTC-CGGGG-TTHHHHHHHTTCEEEECCCTTSTTCCCCGGGCCSHHHHHHHHHHHHHT----SCSSSCEEE
T ss_pred CCeEEEECCCCC-CcchH-HHHHHHHHhCCCEEEEecCCCCCCCccCcccccCHHHHHHHHHHHHHH----hccCCCEEE
Confidence 467999999964 44445 6788899888999999999999999753222222 2333455554443 33 368999
Q ss_pred EEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccc--------cc
Q 008093 238 IGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRY--------SR 309 (578)
Q Consensus 238 vGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l--------~~ 309 (578)
|||||||.+++.++.++|+ +|+++|++++......... ......+... +.. ..........+ ..
T Consensus 78 vGhSmGG~va~~~a~~~P~--~v~~lvl~~~~~~~~~~~~---~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~ 149 (273)
T 1xkl_A 78 VGHSLGGMNLGLAMEKYPQ--KIYAAVFLAAFMPDSVHNS---SFVLEQYNER-TPA--ENWLDTQFLPYGSPEEPLTSM 149 (273)
T ss_dssp EEETTHHHHHHHHHHHCGG--GEEEEEEESCCCCCSSSCT---THHHHHHHHT-SCT--TTTTTCEEEECSCTTSCCEEE
T ss_pred EecCHHHHHHHHHHHhChH--hheEEEEEeccCCCCCCcH---HHHHHHhhcc-CCh--hhHHHHHHhhccCCCCCcccc
Confidence 9999999999999999998 8999999987421110000 0000000000 000 00000000000 00
Q ss_pred cCCHHHHh----ccCCHHH--HHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcC
Q 008093 310 LANWEGIK----KSRSIRD--FDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRAN 383 (578)
Q Consensus 310 ~~d~~~i~----~~~s~~e--fd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~ 383 (578)
......+. ....... +......+. ......... ......-...++|+|+|+|++|+++|.+.... ..+..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~P~l~i~G~~D~~~p~~~~~~-~~~~~ 225 (273)
T 1xkl_A 150 FFGPKFLAHKLYQLCSPEDLALASSLVRPS--SLFMEDLSK-AKYFTDERFGSVKRVYIVCTEDKGIPEEFQRW-QIDNI 225 (273)
T ss_dssp ECCHHHHHHHTSTTSCHHHHHHHHHHCCCB--CCCHHHHHH-CCCCCTTTGGGSCEEEEEETTCTTTTHHHHHH-HHHHH
T ss_pred ccCHHHHHHHhhccCCHHHHHHHHHhcCCC--chhhhhhhc-ccccchhhhCCCCeEEEEeCCccCCCHHHHHH-HHHhC
Confidence 00000000 0000000 000000000 001111111 11111111147899999999999999775433 34456
Q ss_pred CCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 384 KNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 384 ~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
++.++.+++++||+.++|. | ..+.+.|.+|++..
T Consensus 226 p~~~~~~i~~aGH~~~~e~--P--~~~~~~i~~fl~~~ 259 (273)
T 1xkl_A 226 GVTEAIEIKGADHMAMLCE--P--QKLCASLLEIAHKY 259 (273)
T ss_dssp CCSEEEEETTCCSCHHHHS--H--HHHHHHHHHHHHHC
T ss_pred CCCeEEEeCCCCCCchhcC--H--HHHHHHHHHHHHHh
Confidence 7889999999999999993 3 35999999999864
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.1e-20 Score=192.01 Aligned_cols=228 Identities=13% Similarity=0.104 Sum_probs=134.5
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCC-CCchHHHHHHHHHHHHHCCCCcEEEE
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN-AGWTEDAREVIGYLHHEYPKAPLFAI 238 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~-~~~~~Dl~~~i~~l~~~~~~~~i~lv 238 (578)
+|+||++||++++ ...| ..++..+ ||+|+++|+||||.|+......+. ..+.+|+.+++++ .+..+++++
T Consensus 81 ~~~vv~~hG~~~~-~~~~-~~~~~~l---g~~Vi~~D~~G~G~S~~~~~~~~~~~~~a~dl~~~l~~----l~~~~v~lv 151 (330)
T 3p2m_A 81 APRVIFLHGGGQN-AHTW-DTVIVGL---GEPALAVDLPGHGHSAWREDGNYSPQLNSETLAPVLRE----LAPGAEFVV 151 (330)
T ss_dssp CCSEEEECCTTCC-GGGG-HHHHHHS---CCCEEEECCTTSTTSCCCSSCBCCHHHHHHHHHHHHHH----SSTTCCEEE
T ss_pred CCeEEEECCCCCc-cchH-HHHHHHc---CCeEEEEcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----hCCCCcEEE
Confidence 5779999999654 4445 5555555 999999999999999855443332 2233455555544 345689999
Q ss_pred EEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHH----HhHHHHHhhhcccccccCCHH
Q 008093 239 GTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALT----IGLQDYAQLHEPRYSRLANWE 314 (578)
Q Consensus 239 GhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~----~~l~~~~~~~~~~l~~~~d~~ 314 (578)
||||||.+++.+|.++|+ +|+++|+++++.........+.... ......... ..+.........
T Consensus 152 GhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--------- 219 (330)
T 3p2m_A 152 GMSLGGLTAIRLAAMAPD--LVGELVLVDVTPSALQRHAELTAEQ-RGTVALMHGEREFPSFQAMLDLTIA--------- 219 (330)
T ss_dssp EETHHHHHHHHHHHHCTT--TCSEEEEESCCHHHHHHHHHHTCC------------CCBSCHHHHHHHHHH---------
T ss_pred EECHhHHHHHHHHHhChh--hcceEEEEcCCCccchhhhhhhhhh-hhhhhhhcCCccccCHHHHHHHHHh---------
Confidence 999999999999999998 8999999997643322111111000 000000000 000000000000
Q ss_pred HHhccCCHHHHHhhhhh---------------ccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHH
Q 008093 315 GIKKSRSIRDFDSHATC---------------LVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDE 379 (578)
Q Consensus 315 ~i~~~~s~~efd~~~~~---------------~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~ 379 (578)
.........+...+.. ....+....+. ...+.+|++|+|+|+|++|+++|.+.... .
T Consensus 220 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~l~~i~~PvLii~G~~D~~v~~~~~~~-l 291 (330)
T 3p2m_A 220 -AAPHRDVKSLRRGVFHNSRRLDNGNWVWRYDAIRTFGDFAGL------WDDVDALSAPITLVRGGSSGFVTDQDTAE-L 291 (330)
T ss_dssp -HCTTSCHHHHHHHHHTTEEECSSSCEEESSCCCSBCCCHHHH------HHHHHHCCSCEEEEEETTCCSSCHHHHHH-H
T ss_pred -cCCCCCHHHHHHHHHhcccccCCCceEEeechhhCccccHHH------HHHHhhCCCCEEEEEeCCCCCCCHHHHHH-H
Confidence 0000001111111000 00001111111 13466789999999999999999775543 4
Q ss_pred HhcCCCEE-EEEeCCCCccccccccccCcccHHHHHHHHHHh
Q 008093 380 CRANKNVV-LATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 380 ~~~~~~~~-l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
.+..++.+ +.+++++||+.++|. +..+.+.|.+||++
T Consensus 292 ~~~~~~~~~~~~i~~~gH~~~~e~----p~~~~~~i~~fl~~ 329 (330)
T 3p2m_A 292 HRRATHFRGVHIVEKSGHSVQSDQ----PRALIEIVRGVLDT 329 (330)
T ss_dssp HHHCSSEEEEEEETTCCSCHHHHC----HHHHHHHHHHHTTC
T ss_pred HHhCCCCeeEEEeCCCCCCcchhC----HHHHHHHHHHHHhc
Confidence 56678888 999999999998883 33588899999863
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=2e-20 Score=188.41 Aligned_cols=236 Identities=15% Similarity=0.153 Sum_probs=134.6
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCC-CCchHHHHHHHHHHHHHCCCCcEEE
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN-AGWTEDAREVIGYLHHEYPKAPLFA 237 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~-~~~~~Dl~~~i~~l~~~~~~~~i~l 237 (578)
.+|+||++||+++ +...| ..++..|.+ +|+|+++|+||||.|+.... .|+ ..+.+|+.++++++. ..++++
T Consensus 26 ~~p~vvllHG~~~-~~~~w-~~~~~~L~~-~~rvia~DlrGhG~S~~~~~-~~~~~~~a~dl~~ll~~l~----~~~~~l 97 (276)
T 2wj6_A 26 DGPAILLLPGWCH-DHRVY-KYLIQELDA-DFRVIVPNWRGHGLSPSEVP-DFGYQEQVKDALEILDQLG----VETFLP 97 (276)
T ss_dssp SSCEEEEECCTTC-CGGGG-HHHHHHHTT-TSCEEEECCTTCSSSCCCCC-CCCHHHHHHHHHHHHHHHT----CCSEEE
T ss_pred CCCeEEEECCCCC-cHHHH-HHHHHHHhc-CCEEEEeCCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHhC----CCceEE
Confidence 3478999999965 45456 678888764 79999999999999976432 233 345577777777664 458999
Q ss_pred EEEchHHHHHHHHHhhc-CCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHH-HHHHHhHHHHHhhhcccccccCCHH-
Q 008093 238 IGTSIGANILVKYLGEE-GEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYD-RALTIGLQDYAQLHEPRYSRLANWE- 314 (578)
Q Consensus 238 vGhSmGG~ial~ya~~~-p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~-~~l~~~l~~~~~~~~~~l~~~~d~~- 314 (578)
+||||||.+++.+|..+ |+ +|+++|++++....... ... ... ..... ................. ..+..
T Consensus 98 vGhSmGG~va~~~A~~~~P~--rv~~lvl~~~~~~~~~~-~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 169 (276)
T 2wj6_A 98 VSHSHGGWVLVELLEQAGPE--RAPRGIIMDWLMWAPKP-DFA-KSL-TLLKDPERWREGTHGLFDVWLDG---HDEKRV 169 (276)
T ss_dssp EEEGGGHHHHHHHHHHHHHH--HSCCEEEESCCCSSCCH-HHH-HHH-HHHHCTTTHHHHHHHHHHHHHTT---BCCHHH
T ss_pred EEECHHHHHHHHHHHHhCHH--hhceEEEecccccCCCc-hHH-HHh-hhccCcchHHHHHHHHHHHhhcc---cchHHH
Confidence 99999999999999999 98 89999999864211100 000 000 00000 00000000000000000 00000
Q ss_pred --HHhc---cCCHHHHHhhhhhccCCCCCHHHHHH-hCCcccccCCCccceEEEEeCCCCCCCC-CCcchHHHhcCCCEE
Q 008093 315 --GIKK---SRSIRDFDSHATCLVGKFETVDTYYR-NCSSSTYVGNVSIPLLCISSLDDPVCTV-EAIPWDECRANKNVV 387 (578)
Q Consensus 315 --~i~~---~~s~~efd~~~~~~~~g~~~~~~yy~-~~s~~~~l~~I~vPvLiI~g~dDpivp~-~~~~~~~~~~~~~~~ 387 (578)
.+.. ......+.... ......+. .......+.+|++|+|++++..|+..+. ...........++.+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~l~~i~~P~lv~~~~~~~~~~~~~~~~~~~~~~~p~a~ 242 (276)
T 2wj6_A 170 RHHLLEEMADYGYDCWGRSG-------RVIEDAYGRNGSPMQMMANLTKTRPIRHIFSQPTEPEYEKINSDFAEQHPWFS 242 (276)
T ss_dssp HHHHHTTTTTCCHHHHHHHH-------HHHHHHHHHHCCHHHHHHTCSSCCCEEEEECCSCSHHHHHHHHHHHHHCTTEE
T ss_pred HHHHHHHhhhcchhhhhhcc-------chhHHHHhhccchhhHHhhcCCCceEEEEecCccchhHHHHHHHHHhhCCCeE
Confidence 0000 00000000000 00011111 1122345678999999998744332221 111122445678999
Q ss_pred EEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 388 LATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 388 l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
+++++++||+.+.|. | ..+++.|.+||+..
T Consensus 243 ~~~i~~~gH~~~~e~--P--~~~~~~i~~Fl~~~ 272 (276)
T 2wj6_A 243 YAKLGGPTHFPAIDV--P--DRAAVHIREFATAI 272 (276)
T ss_dssp EEECCCSSSCHHHHS--H--HHHHHHHHHHHHHH
T ss_pred EEEeCCCCCcccccC--H--HHHHHHHHHHHhhc
Confidence 999999999999983 3 36999999999865
|
| >2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.84 E-value=4.2e-20 Score=192.32 Aligned_cols=251 Identities=13% Similarity=0.084 Sum_probs=139.5
Q ss_pred CCcEEEEECCCCCCCcc--------HHHHHHHH---HHHhCCceEEEEeCCC-CCCCCCCCC------CCCC----CCch
Q 008093 159 TTPIAIVIPGLTSDSAA--------SYIRHLVF---NTAKRGWNVVVSNHRG-LGGVSITSD------CFYN----AGWT 216 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~--------~yi~~l~~---~l~~~Gy~Vvv~D~RG-~G~S~~~~~------~~~~----~~~~ 216 (578)
..|+||++||+++++.. +| ..++. .|.+.||+|+++|+|| ||+|..... ..+. ....
T Consensus 58 ~~~~vvllHG~~~~~~~~~~~~~~~~~-~~~~~~~~~L~~~g~~vi~~D~~G~~g~s~~~~~~~~~~g~~~~~~~~~~~~ 136 (377)
T 2b61_A 58 KNNAVLICHALTGDAEPYFDDGRDGWW-QNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSINPQTGKPYGSQFPNIVV 136 (377)
T ss_dssp CCCEEEEECCTTCCSCSCCSSSCCCTT-GGGEETTSSEETTTCEEEEECCTTCSSSSSCTTSBCTTTSSBCGGGCCCCCH
T ss_pred CCCeEEEeCCCCCccccccccccchhh-hhccCcccccccCCceEEEecCCCCCCCCCCCcccCccccccccccCCcccH
Confidence 35889999999776554 15 55553 3657899999999999 788765421 1110 1123
Q ss_pred HHHHHHHHHHHHHCCCCcEE-EEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHH-------
Q 008093 217 EDAREVIGYLHHEYPKAPLF-AIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIY------- 288 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~~~~i~-lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~------- 288 (578)
+|+.+.+..+.+..+..+++ ++||||||.+++.+|.++|+ +|+++|+++++.................+.
T Consensus 137 ~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (377)
T 2b61_A 137 QDIVKVQKALLEHLGISHLKAIIGGSFGGMQANQWAIDYPD--FMDNIVNLCSSIYFSAEAIGFNHVMRQAVINDPNFNG 214 (377)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHSTT--SEEEEEEESCCSSCCHHHHHHHHHHHHHHHTSTTCGG
T ss_pred HHHHHHHHHHHHHcCCcceeEEEEEChhHHHHHHHHHHCch--hhheeEEeccCccccccchhHHHHHHHHHhcCccccc
Confidence 44444444444555566887 99999999999999999998 899999999865432111111000000000
Q ss_pred ---------------HHHHHH----hHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhc-cCCCCCHHHH------
Q 008093 289 ---------------DRALTI----GLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCL-VGKFETVDTY------ 342 (578)
Q Consensus 289 ---------------~~~l~~----~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~-~~g~~~~~~y------ 342 (578)
...+.. .-..+............... .......++....... ...+ ....+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 291 (377)
T 2b61_A 215 GDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFW--GDYFQVESYLSYQGKKFLERF-DANSYLHLLRA 291 (377)
T ss_dssp GCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTT--SCCBHHHHHHHHHHHHHHTTC-CHHHHHHHHHH
T ss_pred cchhccCCCchhhhHHHHhhhhcccCHHHHHHHhccccccccccc--cchHHHHHHHHhhhhhhcccc-ChhHHHHHHHH
Confidence 000000 00000000000000000000 0000011111100000 0000 00111
Q ss_pred HHhC-------CcccccCCCccceEEEEeCCCCCCCC----CCcchHHHhcCCCEEEEEeC-CCCccccccccccCcccH
Q 008093 343 YRNC-------SSSTYVGNVSIPLLCISSLDDPVCTV----EAIPWDECRANKNVVLATTW-HGGHLAFFEGLTAAGMWW 410 (578)
Q Consensus 343 y~~~-------s~~~~l~~I~vPvLiI~g~dDpivp~----~~~~~~~~~~~~~~~l~~~~-~GGH~~~~eg~~~~~~w~ 410 (578)
.... .....+.+|++|+|+|+|++|+++|. +... ...+..++.++.+++ ++||+.++|. + ..+
T Consensus 292 ~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~-~l~~~~~~~~~~~i~~~~gH~~~~e~--p--~~~ 366 (377)
T 2b61_A 292 LDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQ-LLEQSGVDLHFYEFPSDYGHDAFLVD--Y--DQF 366 (377)
T ss_dssp HHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHH-HHHHTTCEEEEEEECCTTGGGHHHHC--H--HHH
T ss_pred HhccccccccchHHhhhhhcCCCEEEEecCCcccCCccchHHHHH-HHHhcCCCceEEEeCCCCCchhhhcC--H--HHH
Confidence 0000 11356788999999999999999998 4433 345667889999999 9999999983 2 368
Q ss_pred HHHHHHHHHh
Q 008093 411 VRAVNEYLGV 420 (578)
Q Consensus 411 ~~~v~eFL~~ 420 (578)
.+.|.+||++
T Consensus 367 ~~~i~~fl~~ 376 (377)
T 2b61_A 367 EKRIRDGLAG 376 (377)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhc
Confidence 8999999874
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.83 E-value=8e-21 Score=190.63 Aligned_cols=225 Identities=11% Similarity=0.016 Sum_probs=149.7
Q ss_pred CCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCC
Q 008093 129 DGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSD 208 (578)
Q Consensus 129 DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~ 208 (578)
||.++...++.+ ...|+||++||++++.. .| ..++..|.++||+|+++|+||+|.|.....
T Consensus 14 ~g~~l~~~~~~p-----------------~~~p~vv~~HG~~~~~~-~~-~~~~~~l~~~g~~v~~~d~~G~g~s~~~~~ 74 (290)
T 3ksr_A 14 GQDELSGTLLTP-----------------TGMPGVLFVHGWGGSQH-HS-LVRAREAVGLGCICMTFDLRGHEGYASMRQ 74 (290)
T ss_dssp TTEEEEEEEEEE-----------------ESEEEEEEECCTTCCTT-TT-HHHHHHHHTTTCEEECCCCTTSGGGGGGTT
T ss_pred CCeEEEEEEecC-----------------CCCcEEEEeCCCCCCcC-cH-HHHHHHHHHCCCEEEEeecCCCCCCCCCcc
Confidence 788888877654 15689999999966444 44 678999999999999999999999876533
Q ss_pred CCCCCCchHHHHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHH
Q 008093 209 CFYNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQK 286 (578)
Q Consensus 209 ~~~~~~~~~Dl~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~ 286 (578)
......+.+|+.++++++..+. +..+++++||||||.+++.++..++ +++++++++......... ....
T Consensus 75 ~~~~~~~~~d~~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~----~~~~~l~~p~~~~~~~~~-~~~~---- 145 (290)
T 3ksr_A 75 SVTRAQNLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP----VEWLALRSPALYKDAHWD-QPKV---- 145 (290)
T ss_dssp TCBHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC----CSEEEEESCCCCCSSCTT-SBHH----
T ss_pred cccHHHHHHHHHHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC----CCEEEEeCcchhhhhhhh-cccc----
Confidence 3333455689999999998653 2358999999999999999998875 678888877654321100 0000
Q ss_pred HHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCC
Q 008093 287 IYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLD 366 (578)
Q Consensus 287 ~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~d 366 (578)
.+.. ...+..+.... .... .......+.++++|+|+++|++
T Consensus 146 ~~~~----------------------------~~~~~~~~~~~----~~~~-------~~~~~~~~~~~~~P~lii~G~~ 186 (290)
T 3ksr_A 146 SLNA----------------------------DPDLMDYRRRA----LAPG-------DNLALAACAQYKGDVLLVEAEN 186 (290)
T ss_dssp HHHH----------------------------STTHHHHTTSC----CCGG-------GCHHHHHHHHCCSEEEEEEETT
T ss_pred cccC----------------------------Chhhhhhhhhh----hhhc-------cccHHHHHHhcCCCeEEEEecC
Confidence 0000 00000000000 0000 0111234556889999999999
Q ss_pred CCCCCCCCcchHHHh--cCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcC
Q 008093 367 DPVCTVEAIPWDECR--ANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHS 423 (578)
Q Consensus 367 Dpivp~~~~~~~~~~--~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~ 423 (578)
|++++.+........ ...++++.+++++||..+.+. ....+.+.+.+||++...
T Consensus 187 D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~---~~~~~~~~i~~fl~~~~~ 242 (290)
T 3ksr_A 187 DVIVPHPVMRNYADAFTNARSLTSRVIAGADHALSVKE---HQQEYTRALIDWLTEMVV 242 (290)
T ss_dssp CSSSCHHHHHHHHHHTTTSSEEEEEEETTCCTTCCSHH---HHHHHHHHHHHHHHHHHH
T ss_pred CcccChHHHHHHHHHhccCCCceEEEcCCCCCCCCcch---HHHHHHHHHHHHHHHHhc
Confidence 999998754432222 233578999999999765541 233578899999988754
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.83 E-value=4.8e-20 Score=184.65 Aligned_cols=238 Identities=11% Similarity=0.060 Sum_probs=131.8
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEE
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAI 238 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lv 238 (578)
.+|+||++||++.......+..++..|. +||+|+++|+||||.|+......+. .+|+.+.+..+.+..+..+++++
T Consensus 40 ~~p~vv~lHG~G~~~~~~~~~~~~~~L~-~~~~vi~~D~~G~G~S~~~~~~~~~---~~~~~~~l~~~l~~~~~~~~~lv 115 (292)
T 3l80_A 40 GNPCFVFLSGAGFFSTADNFANIIDKLP-DSIGILTIDAPNSGYSPVSNQANVG---LRDWVNAILMIFEHFKFQSYLLC 115 (292)
T ss_dssp CSSEEEEECCSSSCCHHHHTHHHHTTSC-TTSEEEEECCTTSTTSCCCCCTTCC---HHHHHHHHHHHHHHSCCSEEEEE
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHHh-hcCeEEEEcCCCCCCCCCCCccccc---HHHHHHHHHHHHHHhCCCCeEEE
Confidence 3488999996532222223367777776 6999999999999999833332222 23444444444444555699999
Q ss_pred EEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHh------hHHHHHH----HHH-HHHHhHHHHHhhhcccc
Q 008093 239 GTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIG------RRLIQKI----YDR-ALTIGLQDYAQLHEPRY 307 (578)
Q Consensus 239 GhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~------~~~~~~~----~~~-~l~~~l~~~~~~~~~~l 307 (578)
||||||.+++.+|.++|+ +|+++|+++++........... ....... ... .+...+.... .+..
T Consensus 116 GhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 190 (292)
T 3l80_A 116 VHSIGGFAALQIMNQSSK--ACLGFIGLEPTTVMIYRAGFSSDLYPQLALRRQKLKTAADRLNYLKDLSRSHF---SSQQ 190 (292)
T ss_dssp EETTHHHHHHHHHHHCSS--EEEEEEEESCCCHHHHHHCTTSSSSHHHHHHHHTCCSHHHHHHHHHHHHHHHS---CHHH
T ss_pred EEchhHHHHHHHHHhCch--heeeEEEECCCCcchhhhccccccchhHHHHHHHHhccCchhhhHhhcccccc---CHHH
Confidence 999999999999999998 8999999995432111000000 0000000 000 0000000000 0000
Q ss_pred cccCCHHHHhccCCHHHHHhhhh-hccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCE
Q 008093 308 SRLANWEGIKKSRSIRDFDSHAT-CLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNV 386 (578)
Q Consensus 308 ~~~~d~~~i~~~~s~~efd~~~~-~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~ 386 (578)
.. ...... ......+..... .....+.... .......+++ ++|+|+|+|++|++++.+ . ......++.
T Consensus 191 ~~-~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~~l~~-~~P~lii~g~~D~~~~~~-~--~~~~~~~~~ 259 (292)
T 3l80_A 191 FK-QLWRGY--DYCQRQLNDVQSLPDFKIRLALG----EEDFKTGISE-KIPSIVFSESFREKEYLE-S--EYLNKHTQT 259 (292)
T ss_dssp HH-HHHHHH--HHHHHHHHTTTTSTTCCSSCCCC----GGGGCCCCCT-TSCEEEEECGGGHHHHHT-S--TTCCCCTTC
T ss_pred HH-HhHHHH--HHHHHHHHhhhhccccchhhhhc----chhhhhccCC-CCCEEEEEccCccccchH-H--HHhccCCCc
Confidence 00 000000 000000000000 0000011000 0011135667 999999999999999887 4 344566777
Q ss_pred EEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 387 VLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 387 ~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
+ ++++++||+.+.|. + ..+.+.|.+||++.
T Consensus 260 ~-~~~~~~gH~~~~e~--p--~~~~~~i~~fl~~~ 289 (292)
T 3l80_A 260 K-LILCGQHHYLHWSE--T--NSILEKVEQLLSNH 289 (292)
T ss_dssp E-EEECCSSSCHHHHC--H--HHHHHHHHHHHHTC
T ss_pred e-eeeCCCCCcchhhC--H--HHHHHHHHHHHHhc
Confidence 8 89999999999883 3 35889999999864
|
| >3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=9.6e-20 Score=181.91 Aligned_cols=225 Identities=14% Similarity=0.064 Sum_probs=144.5
Q ss_pred cCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECC---CCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCC
Q 008093 128 SDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPG---LTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVS 204 (578)
Q Consensus 128 ~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHG---l~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~ 204 (578)
.||..+.++++.|.... .+......|+||++|| ..+ +...| ..++..|+++||.|+++|+||+|.++
T Consensus 11 ~~~~~~~~~~~~p~~~~--------~~~~~~~~p~vv~~HGgg~~~~-~~~~~-~~~~~~l~~~G~~v~~~d~~g~g~~~ 80 (277)
T 3bxp_A 11 TAAHPFQITAYWLDQIS--------DFETAVDYPIMIICPGGGFTYH-SGREE-APIATRMMAAGMHTVVLNYQLIVGDQ 80 (277)
T ss_dssp STTCCEEEEEEEECCCC--------SSSCCCCEEEEEEECCSTTTSC-CCTTH-HHHHHHHHHTTCEEEEEECCCSTTTC
T ss_pred cCCCcceEEEEeCCccc--------ccccCCCccEEEEECCCccccC-CCccc-hHHHHHHHHCCCEEEEEecccCCCCC
Confidence 57888888888774200 0011356799999999 433 44455 67888999999999999999999543
Q ss_pred CCCCCCCCCCchHHHHHHHHHHHHH-----CCCCcEEEEEEchHHHHHHHHHhhcCC------------CCCccEEEEEc
Q 008093 205 ITSDCFYNAGWTEDAREVIGYLHHE-----YPKAPLFAIGTSIGANILVKYLGEEGE------------KTPVAGAAAIC 267 (578)
Q Consensus 205 ~~~~~~~~~~~~~Dl~~~i~~l~~~-----~~~~~i~lvGhSmGG~ial~ya~~~p~------------~~~V~~~Vlis 267 (578)
. ......+|+.++++++.+. ....+++++||||||.+++.++...++ ..+++++|+++
T Consensus 81 ~-----~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 155 (277)
T 3bxp_A 81 S-----VYPWALQQLGATIDWITTQASAHHVDCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQHAAIILGY 155 (277)
T ss_dssp C-----CTTHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTSHHHHHHTTCTTCCCCCSEEEEES
T ss_pred c-----cCchHHHHHHHHHHHHHhhhhhcCCChhheEEEEeCHHHHHHHHHHhhccCcccccccCcccccCCcCEEEEeC
Confidence 2 1224568899999988765 234589999999999999999988532 22799999999
Q ss_pred CCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHH-hhhhhccCCCCCHHHHHHhC
Q 008093 268 SPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFD-SHATCLVGKFETVDTYYRNC 346 (578)
Q Consensus 268 ~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd-~~~~~~~~g~~~~~~yy~~~ 346 (578)
+..+...... ... .++ ..+ + .+...
T Consensus 156 p~~~~~~~~~--~~~-----------------------------------------~~~~~~~-----~------~~~~~ 181 (277)
T 3bxp_A 156 PVIDLTAGFP--TTS-----------------------------------------AARNQIT-----T------DARLW 181 (277)
T ss_dssp CCCBTTSSSS--SSH-----------------------------------------HHHHHHC-----S------CGGGS
T ss_pred CcccCCCCCC--Ccc-----------------------------------------ccchhcc-----c------hhhhc
Confidence 8776432100 000 000 000 0 00122
Q ss_pred CcccccCCCccceEEEEeCCCCCCCCCCcch---HHHhcCCCEEEEEeCCCCcc-ccccccc----------cCcccHHH
Q 008093 347 SSSTYVGNVSIPLLCISSLDDPVCTVEAIPW---DECRANKNVVLATTWHGGHL-AFFEGLT----------AAGMWWVR 412 (578)
Q Consensus 347 s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~---~~~~~~~~~~l~~~~~GGH~-~~~eg~~----------~~~~w~~~ 412 (578)
++...+.++.+|+|+++|++|+++|.+.... .......++++.+++++||. ...+... +....+.+
T Consensus 182 ~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (277)
T 3bxp_A 182 AAQRLVTPASKPAFVWQTATDESVPPINSLKYVQAMLQHQVATAYHLFGSGIHGLALANHVTQKPGKDKYLNDQAAIWPQ 261 (277)
T ss_dssp BGGGGCCTTSCCEEEEECTTCCCSCTHHHHHHHHHHHHTTCCEEEEECCCC----------------CHHHHHHHHHHHH
T ss_pred CHhhccccCCCCEEEEeeCCCCccChHHHHHHHHHHHHCCCeEEEEEeCCCCcccccccccccCccccccccchHHHHHH
Confidence 3344567788999999999999999764332 22344667899999999994 4333210 11234667
Q ss_pred HHHHHHHhh
Q 008093 413 AVNEYLGVL 421 (578)
Q Consensus 413 ~v~eFL~~~ 421 (578)
.+.+||++.
T Consensus 262 ~~~~fl~~~ 270 (277)
T 3bxp_A 262 LALRWLQEQ 270 (277)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhc
Confidence 888888765
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 | Back alignment and structure |
|---|
Probab=99.83 E-value=2.9e-20 Score=179.51 Aligned_cols=195 Identities=18% Similarity=0.166 Sum_probs=135.5
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCC-----------CCCchHHHHHHHHHHH
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFY-----------NAGWTEDAREVIGYLH 227 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~-----------~~~~~~Dl~~~i~~l~ 227 (578)
.+|+||++||+++ +...| ..++..|.++||+|+++|+||+|.+........ .....+|+.++++++.
T Consensus 23 ~~~~vv~~hG~~~-~~~~~-~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~ 100 (238)
T 1ufo_A 23 PKALLLALHGLQG-SKEHI-LALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAE 100 (238)
T ss_dssp CCEEEEEECCTTC-CHHHH-HHTSTTTGGGTEEEEECCCTTSTTSSCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccEEEEECCCcc-cchHH-HHHHHHHHhCCCEEEEecCCCCccCCCCCCcccccchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 6789999999954 55555 678888889999999999999999865432211 1134578999999998
Q ss_pred HHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccc
Q 008093 228 HEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRY 307 (578)
Q Consensus 228 ~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l 307 (578)
+... .+++++||||||.+++.++..+++ .+.++++++++.......... .
T Consensus 101 ~~~~-~~i~l~G~S~Gg~~a~~~a~~~~~--~~~~~~~~~~~~~~~~~~~~~--------------------------~- 150 (238)
T 1ufo_A 101 RRFG-LPLFLAGGSLGAFVAHLLLAEGFR--PRGVLAFIGSGFPMKLPQGQV--------------------------V- 150 (238)
T ss_dssp HHHC-CCEEEEEETHHHHHHHHHHHTTCC--CSCEEEESCCSSCCCCCTTCC--------------------------C-
T ss_pred hccC-CcEEEEEEChHHHHHHHHHHhccC--cceEEEEecCCccchhhhhhc--------------------------c-
Confidence 7655 789999999999999999999887 677877776543221100000 0
Q ss_pred cccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCC-ccceEEEEeCCCCCCCCCCcchHHHhcCC--
Q 008093 308 SRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNV-SIPLLCISSLDDPVCTVEAIPWDECRANK-- 384 (578)
Q Consensus 308 ~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I-~vPvLiI~g~dDpivp~~~~~~~~~~~~~-- 384 (578)
...+ ...+...+....+.++ ++|+|+++|++|+++|.+...... +..+
T Consensus 151 ---~~~~-------------------------~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~-~~~~~~ 201 (238)
T 1ufo_A 151 ---EDPG-------------------------VLALYQAPPATRGEAYGGVPLLHLHGSRDHIVPLARMEKTL-EALRPH 201 (238)
T ss_dssp ---CCHH-------------------------HHHHHHSCGGGCGGGGTTCCEEEEEETTCTTTTHHHHHHHH-HHHGGG
T ss_pred ---CCcc-------------------------cchhhcCChhhhhhhccCCcEEEEECCCCCccCcHHHHHHH-HHHhhc
Confidence 0000 1112223344556677 899999999999999987544322 2222
Q ss_pred ----CEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhc
Q 008093 385 ----NVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 385 ----~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~ 422 (578)
++++.+++++||..+.+ ..+.+.+||.+..
T Consensus 202 ~~~~~~~~~~~~~~~H~~~~~--------~~~~~~~~l~~~l 235 (238)
T 1ufo_A 202 YPEGRLARFVEEGAGHTLTPL--------MARVGLAFLEHWL 235 (238)
T ss_dssp CTTCCEEEEEETTCCSSCCHH--------HHHHHHHHHHHHH
T ss_pred CCCCceEEEEeCCCCcccHHH--------HHHHHHHHHHHHH
Confidence 88999999999987665 3456667776654
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.4e-19 Score=182.97 Aligned_cols=243 Identities=13% Similarity=0.056 Sum_probs=151.3
Q ss_pred CCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeC
Q 008093 118 FSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 197 (578)
Q Consensus 118 ~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~ 197 (578)
+..++..+...||..+...++.|.. ....|+||++||++++....+ .... .++++||+|+++|+
T Consensus 54 ~~~~~~~~~~~~g~~i~~~~~~P~~--------------~~~~p~vv~~HG~~~~~~~~~-~~~~-~l~~~g~~v~~~d~ 117 (318)
T 1l7a_A 54 VKVYRLTYKSFGNARITGWYAVPDK--------------EGPHPAIVKYHGYNASYDGEI-HEMV-NWALHGYATFGMLV 117 (318)
T ss_dssp EEEEEEEEEEGGGEEEEEEEEEESS--------------CSCEEEEEEECCTTCCSGGGH-HHHH-HHHHTTCEEEEECC
T ss_pred eEEEEEEEEccCCCEEEEEEEeeCC--------------CCCccEEEEEcCCCCCCCCCc-cccc-chhhCCcEEEEecC
Confidence 3455666777799889887776632 246789999999965414434 3333 67788999999999
Q ss_pred CCCCCCCCCCCC-------CCC-----------CCchHHHHHHHHHHHHHCC--CCcEEEEEEchHHHHHHHHHhhcCCC
Q 008093 198 RGLGGVSITSDC-------FYN-----------AGWTEDAREVIGYLHHEYP--KAPLFAIGTSIGANILVKYLGEEGEK 257 (578)
Q Consensus 198 RG~G~S~~~~~~-------~~~-----------~~~~~Dl~~~i~~l~~~~~--~~~i~lvGhSmGG~ial~ya~~~p~~ 257 (578)
||+|.+...... ... ....+|+.++++++..... ..+++++||||||.+++.++..+++
T Consensus 118 rg~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~- 196 (318)
T 1l7a_A 118 RGQQRSEDTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI- 196 (318)
T ss_dssp TTTSSSCCCCCCSSCCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-
T ss_pred CCCCCCCCcccccCCccccceeccCCCHHHHHHHHHHHHHHHHHHHHHhCCCcccceeEEEecChHHHHHHHHhccCCC-
Confidence 999998754210 000 1235799999999987642 3689999999999999999998765
Q ss_pred CCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCC
Q 008093 258 TPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFE 337 (578)
Q Consensus 258 ~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~ 337 (578)
+.++|++++............... .+. .+..+..... . .......
T Consensus 197 --~~~~v~~~p~~~~~~~~~~~~~~~---~~~-----~~~~~~~~~~----------------~-~~~~~~~-------- 241 (318)
T 1l7a_A 197 --PKAAVADYPYLSNFERAIDVALEQ---PYL-----EINSFFRRNG----------------S-PETEVQA-------- 241 (318)
T ss_dssp --CSEEEEESCCSCCHHHHHHHCCST---TTT-----HHHHHHHHSC----------------C-HHHHHHH--------
T ss_pred --ccEEEecCCcccCHHHHHhcCCcC---ccH-----HHHHHHhccC----------------C-cccHHHH--------
Confidence 888888766543211100000000 000 0000000000 0 0000000
Q ss_pred CHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHH
Q 008093 338 TVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEY 417 (578)
Q Consensus 338 ~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eF 417 (578)
.......+....+.++++|+|+++|++|+++|.+...........++++.+++++||... . ...+.+.+|
T Consensus 242 --~~~~~~~~~~~~~~~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~~~-~-------~~~~~~~~f 311 (318)
T 1l7a_A 242 --MKTLSYFDIMNLADRVKVPVLMSIGLIDKVTPPSTVFAAYNHLETKKELKVYRYFGHEYI-P-------AFQTEKLAF 311 (318)
T ss_dssp --HHHHHTTCHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCSSEEEEEETTCCSSCC-H-------HHHHHHHHH
T ss_pred --HHhhccccHHHHHhhCCCCEEEEeccCCCCCCcccHHHHHhhcCCCeeEEEccCCCCCCc-c-------hhHHHHHHH
Confidence 000111123345677889999999999999997754443334444599999999999821 1 367889999
Q ss_pred HHhhc
Q 008093 418 LGVLH 422 (578)
Q Consensus 418 L~~~~ 422 (578)
|++..
T Consensus 312 l~~~l 316 (318)
T 1l7a_A 312 FKQIL 316 (318)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 98764
|
| >3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=2.2e-20 Score=184.16 Aligned_cols=231 Identities=15% Similarity=0.046 Sum_probs=130.5
Q ss_pred CCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEE
Q 008093 157 DDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLF 236 (578)
Q Consensus 157 ~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~ 236 (578)
...+|+||++||+++ +...| ..++..|.+ +|+|+++|+||||.|...........+.+|+.++++ ..+..+++
T Consensus 17 ~~~~~~vv~~HG~~~-~~~~~-~~~~~~l~~-~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~ 89 (267)
T 3fla_A 17 PDARARLVCLPHAGG-SASFF-FPLAKALAP-AVEVLAVQYPGRQDRRHEPPVDSIGGLTNRLLEVLR----PFGDRPLA 89 (267)
T ss_dssp TTCSEEEEEECCTTC-CGGGG-HHHHHHHTT-TEEEEEECCTTSGGGTTSCCCCSHHHHHHHHHHHTG----GGTTSCEE
T ss_pred CCCCceEEEeCCCCC-CchhH-HHHHHHhcc-CcEEEEecCCCCCCCCCCCCCcCHHHHHHHHHHHHH----hcCCCceE
Confidence 356789999999965 45555 678888865 599999999999998754322111122233333333 33567899
Q ss_pred EEEEchHHHHHHHHHhhcCCC--CCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHH
Q 008093 237 AIGTSIGANILVKYLGEEGEK--TPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWE 314 (578)
Q Consensus 237 lvGhSmGG~ial~ya~~~p~~--~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~ 314 (578)
++||||||.+++.++..+++. ..+.++++++++.................+..... .........+ .+.+
T Consensus 90 lvG~S~Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~---~~~~ 161 (267)
T 3fla_A 90 LFGHSMGAIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRDDDVRGASDERLVAELR-----KLGGSDAAML---ADPE 161 (267)
T ss_dssp EEEETHHHHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCCSCTTCCCHHHHHHHHH-----HTCHHHHHHH---HSHH
T ss_pred EEEeChhHHHHHHHHHhhhhhccccccEEEECCCCccccccchhhcccchHHHHHHHH-----HhcCcchhhc---cCHH
Confidence 999999999999999999872 13899999886532211100000000000101000 0000000000 0000
Q ss_pred HHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCC-EEEEEeCC
Q 008093 315 GIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKN-VVLATTWH 393 (578)
Q Consensus 315 ~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~-~~l~~~~~ 393 (578)
. ...+...+.. .+ .......... ..++++|+|+++|++|+++|.+..... ....++ +++.++++
T Consensus 162 ~------~~~~~~~~~~---~~----~~~~~~~~~~-~~~~~~P~l~i~g~~D~~~~~~~~~~~-~~~~~~~~~~~~~~g 226 (267)
T 3fla_A 162 L------LAMVLPAIRS---DY----RAVETYRHEP-GRRVDCPVTVFTGDHDPRVSVGEARAW-EEHTTGPADLRVLPG 226 (267)
T ss_dssp H------HHHHHHHHHH---HH----HHHHHCCCCT-TCCBSSCEEEEEETTCTTCCHHHHHGG-GGGBSSCEEEEEESS
T ss_pred H------HHHHHHHHHH---HH----Hhhhcccccc-cCcCCCCEEEEecCCCCCCCHHHHHHH-HHhcCCCceEEEecC
Confidence 0 0000000000 00 0011111111 267899999999999999997654432 333444 89999997
Q ss_pred CCccccccccccCcccHHHHHHHHHHhhc
Q 008093 394 GGHLAFFEGLTAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 394 GGH~~~~eg~~~~~~w~~~~v~eFL~~~~ 422 (578)
||+.+++. ...+.+.|.+||++..
T Consensus 227 -gH~~~~~~----~~~~~~~i~~fl~~~~ 250 (267)
T 3fla_A 227 -GHFFLVDQ----AAPMIATMTEKLAGPA 250 (267)
T ss_dssp -STTHHHHT----HHHHHHHHHHHTC---
T ss_pred -CceeeccC----HHHHHHHHHHHhcccc
Confidence 99998873 3358889999988754
|
| >3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.83 E-value=7.8e-20 Score=182.46 Aligned_cols=232 Identities=15% Similarity=0.132 Sum_probs=154.5
Q ss_pred EEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCC--CCCCccHHHHHHHHHHHhCCceEEEEeCCC
Q 008093 122 RQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGL--TSDSAASYIRHLVFNTAKRGWNVVVSNHRG 199 (578)
Q Consensus 122 r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl--~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG 199 (578)
.+.+...||..+.+.+..+... ..+...|+||++||. .+++...| ..++..++++||.|+++|+||
T Consensus 16 ~~~~~~~~g~~l~~~~~~~~~~-----------~~~~~~p~vv~~HGgg~~~~~~~~~-~~~~~~l~~~G~~v~~~d~~g 83 (276)
T 3hxk_A 16 KSTFSLNDTAWVDFYQLQNPRQ-----------NENYTFPAIIICPGGGYQHISQRES-DPLALAFLAQGYQVLLLNYTV 83 (276)
T ss_dssp EEECCCBTTBEEEEECCCC-----------------CCBCEEEEECCSTTTSCCGGGS-HHHHHHHHHTTCEEEEEECCC
T ss_pred cccccCCCCeEEEEEEeCCccc-----------ccCCCCCEEEEEcCCccccCCchhh-HHHHHHHHHCCCEEEEecCcc
Confidence 3456677888877644332210 012567999999993 23344444 678899999999999999999
Q ss_pred CCCCCCCCCCCCCCCchHHHHHHHHHHHHHC-----CCCcEEEEEEchHHHHHHHHHhh-cCCCCCccEEEEEcCCcchh
Q 008093 200 LGGVSITSDCFYNAGWTEDAREVIGYLHHEY-----PKAPLFAIGTSIGANILVKYLGE-EGEKTPVAGAAAICSPWDLL 273 (578)
Q Consensus 200 ~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~-----~~~~i~lvGhSmGG~ial~ya~~-~p~~~~V~~~Vlis~p~d~~ 273 (578)
+|.+..... .....+|+.++++++.+.. +..+++++||||||.+++.++.. .+. +++++|++++..+..
T Consensus 84 ~g~s~~~~~---~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~--~~~~~v~~~p~~~~~ 158 (276)
T 3hxk_A 84 MNKGTNYNF---LSQNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQIH--RPKGVILCYPVTSFT 158 (276)
T ss_dssp TTSCCCSCT---HHHHHHHHHHHHHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSSSCSTT--CCSEEEEEEECCBTT
T ss_pred CCCcCCCCc---CchHHHHHHHHHHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHhhccCC--CccEEEEecCcccHH
Confidence 998753211 1145589999999998864 34689999999999999999887 555 799999998877653
Q ss_pred hhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccC
Q 008093 274 IGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVG 353 (578)
Q Consensus 274 ~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~ 353 (578)
..... ...+.... .... ...+....+.
T Consensus 159 ~~~~~-------------------------~~~~~~~~------------------------~~~~----~~~~~~~~~~ 185 (276)
T 3hxk_A 159 FGWPS-------------------------DLSHFNFE------------------------IENI----SEYNISEKVT 185 (276)
T ss_dssp SSCSS-------------------------SSSSSCCC------------------------CSCC----GGGBTTTTCC
T ss_pred hhCCc-------------------------chhhhhcC------------------------chhh----hhCChhhccc
Confidence 21000 00000000 0000 1223445677
Q ss_pred CCccceEEEEeCCCCCCCCCCcch---HHHhcCCCEEEEEeCCCCcccccccc---------ccCcccHHHHHHHHHHhh
Q 008093 354 NVSIPLLCISSLDDPVCTVEAIPW---DECRANKNVVLATTWHGGHLAFFEGL---------TAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 354 ~I~vPvLiI~g~dDpivp~~~~~~---~~~~~~~~~~l~~~~~GGH~~~~eg~---------~~~~~w~~~~v~eFL~~~ 421 (578)
++++|+|+++|++|+++|.+.... .......++++.+++++||....... .+....|.+.+.+||++.
T Consensus 186 ~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~ 265 (276)
T 3hxk_A 186 SSTPPTFIWHTADDEGVPIYNSLKYCDRLSKHQVPFEAHFFESGPHGVSLANRTTAPSDAYCLPSVHRWVSWASDWLERQ 265 (276)
T ss_dssp TTSCCEEEEEETTCSSSCTHHHHHHHHHHHTTTCCEEEEEESCCCTTCTTCSTTSCSSSTTCCHHHHTHHHHHHHHHHHH
T ss_pred cCCCCEEEEecCCCceeChHHHHHHHHHHHHcCCCeEEEEECCCCCCccccCccccccccccCchHHHHHHHHHHHHHhC
Confidence 889999999999999999864332 22334567899999999996555432 111234667888999886
Q ss_pred cC
Q 008093 422 HS 423 (578)
Q Consensus 422 ~~ 423 (578)
.+
T Consensus 266 ~~ 267 (276)
T 3hxk_A 266 IK 267 (276)
T ss_dssp HH
T ss_pred cc
Confidence 53
|
| >3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.83 E-value=5.2e-20 Score=179.08 Aligned_cols=216 Identities=13% Similarity=0.037 Sum_probs=148.1
Q ss_pred eeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCC
Q 008093 120 YRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRG 199 (578)
Q Consensus 120 y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG 199 (578)
.+...++. ||.++...++.|.+. ....|+||++||++|.. ..| ..++..++++||.|+++|+||
T Consensus 6 ~~~~~~~~-~~~~~~~~~~~p~~~-------------~~~~p~vv~~HG~~g~~-~~~-~~~~~~l~~~G~~v~~~d~~g 69 (241)
T 3f67_A 6 AGETSIPS-QGENMPAYHARPKNA-------------DGPLPIVIVVQEIFGVH-EHI-RDLCRRLAQEGYLAIAPELYF 69 (241)
T ss_dssp EEEEEEEE-TTEEEEEEEEEETTC-------------CSCEEEEEEECCTTCSC-HHH-HHHHHHHHHTTCEEEEECTTT
T ss_pred eeeEEEec-CCcceEEEEecCCCC-------------CCCCCEEEEEcCcCccC-HHH-HHHHHHHHHCCcEEEEecccc
Confidence 34455555 888888777766431 24579999999996644 444 889999999999999999999
Q ss_pred CCCCCCCCCCCC-----------CCCchHHHHHHHHHHHHHC-CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEc
Q 008093 200 LGGVSITSDCFY-----------NAGWTEDAREVIGYLHHEY-PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAIC 267 (578)
Q Consensus 200 ~G~S~~~~~~~~-----------~~~~~~Dl~~~i~~l~~~~-~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis 267 (578)
+|+++....... .....+|+.++++++.++. +..+++++||||||.+++.++..+++ +.+++++.
T Consensus 70 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~d~~~i~l~G~S~Gg~~a~~~a~~~~~---~~~~v~~~ 146 (241)
T 3f67_A 70 RQGDPNEYHDIPTLFKELVSKVPDAQVLADLDHVASWAARHGGDAHRLLITGFCWGGRITWLYAAHNPQ---LKAAVAWY 146 (241)
T ss_dssp TTCCGGGCCSHHHHHHHTGGGSCHHHHHHHHHHHHHHHHTTTEEEEEEEEEEETHHHHHHHHHHTTCTT---CCEEEEES
T ss_pred cCCCCCchhhHHHHHHHhhhcCCchhhHHHHHHHHHHHHhccCCCCeEEEEEEcccHHHHHHHHhhCcC---cceEEEEe
Confidence 988754322111 0123589999999998764 24589999999999999999998875 77888766
Q ss_pred CCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCC
Q 008093 268 SPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCS 347 (578)
Q Consensus 268 ~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s 347 (578)
++...... .+ ...+
T Consensus 147 ~~~~~~~~-----------------------------------------------------------~~-------~~~~ 160 (241)
T 3f67_A 147 GKLVGEKS-----------------------------------------------------------LN-------SPKH 160 (241)
T ss_dssp CCCSCCCC-----------------------------------------------------------SS-------SCCC
T ss_pred ccccCCCc-----------------------------------------------------------cC-------CccC
Confidence 54311000 00 0011
Q ss_pred cccccCCCccceEEEEeCCCCCCCCCCcch---HHHhcCCCEEEEEeCCCCccccccccc----cCcccHHHHHHHHHHh
Q 008093 348 SSTYVGNVSIPLLCISSLDDPVCTVEAIPW---DECRANKNVVLATTWHGGHLAFFEGLT----AAGMWWVRAVNEYLGV 420 (578)
Q Consensus 348 ~~~~l~~I~vPvLiI~g~dDpivp~~~~~~---~~~~~~~~~~l~~~~~GGH~~~~eg~~----~~~~w~~~~v~eFL~~ 420 (578)
+...+.++++|+|+++|++|+++|.+.... .....++++++.+++++||....++.. .......+.+.+||++
T Consensus 161 ~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 240 (241)
T 3f67_A 161 PVDIAVDLNAPVLGLYGAKDASIPQDTVETMRQALRAANATAEIVVYPEADHAFNADYRASYHEESAKDGWQRMLAWFAQ 240 (241)
T ss_dssp HHHHGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHHHTTCSEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHTT
T ss_pred HHHhhhhcCCCEEEEEecCCCCCCHHHHHHHHHHHHHcCCCcEEEEECCCCcceecCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 223456678999999999999999764332 223345889999999999976643210 0012345777888764
|
| >1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.83 E-value=8.2e-21 Score=192.15 Aligned_cols=106 Identities=19% Similarity=0.084 Sum_probs=82.2
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhC--CceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcE
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKR--GWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPL 235 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~--Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i 235 (578)
..+|+||++||++++ ...| ..++..|.++ ||+|+++|+||||.|..... ...+|+.+.+..+.+.. ..++
T Consensus 34 ~~~~~vvllHG~~~~-~~~~-~~~~~~L~~~~~g~~vi~~D~~G~G~s~~~~~-----~~~~~~~~~l~~~~~~~-~~~~ 105 (302)
T 1pja_A 34 ASYKPVIVVHGLFDS-SYSF-RHLLEYINETHPGTVVTVLDLFDGRESLRPLW-----EQVQGFREAVVPIMAKA-PQGV 105 (302)
T ss_dssp -CCCCEEEECCTTCC-GGGG-HHHHHHHHHHSTTCCEEECCSSCSGGGGSCHH-----HHHHHHHHHHHHHHHHC-TTCE
T ss_pred CCCCeEEEECCCCCC-hhHH-HHHHHHHHhcCCCcEEEEeccCCCccchhhHH-----HHHHHHHHHHHHHhhcC-CCcE
Confidence 456779999999654 4445 7889999988 99999999999998754311 23456666666555555 5789
Q ss_pred EEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcch
Q 008093 236 FAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (578)
Q Consensus 236 ~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~ 272 (578)
+++||||||.+++.++.++|+. +|+++|+++++...
T Consensus 106 ~lvGhS~Gg~ia~~~a~~~p~~-~v~~lvl~~~~~~~ 141 (302)
T 1pja_A 106 HLICYSQGGLVCRALLSVMDDH-NVDSFISLSSPQMG 141 (302)
T ss_dssp EEEEETHHHHHHHHHHHHCTTC-CEEEEEEESCCTTC
T ss_pred EEEEECHHHHHHHHHHHhcCcc-ccCEEEEECCCccc
Confidence 9999999999999999999862 49999999987643
|
| >1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16 | Back alignment and structure |
|---|
Probab=99.83 E-value=3.5e-19 Score=176.85 Aligned_cols=173 Identities=14% Similarity=0.074 Sum_probs=135.7
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHH------HCC
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHH------EYP 231 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~------~~~ 231 (578)
..+|+||++||+++ +...| ..++..|+++||+|+++|+||+|.++. ...+|+.++++++.+ ..+
T Consensus 52 ~~~p~vv~~HG~~~-~~~~~-~~~~~~l~~~G~~v~~~d~~g~g~~~~--------~~~~d~~~~~~~l~~~~~~~~~~~ 121 (262)
T 1jfr_A 52 GTFGAVVISPGFTA-YQSSI-AWLGPRLASQGFVVFTIDTNTTLDQPD--------SRGRQLLSALDYLTQRSSVRTRVD 121 (262)
T ss_dssp CCEEEEEEECCTTC-CGGGT-TTHHHHHHTTTCEEEEECCSSTTCCHH--------HHHHHHHHHHHHHHHTSTTGGGEE
T ss_pred CCCCEEEEeCCcCC-CchhH-HHHHHHHHhCCCEEEEeCCCCCCCCCc--------hhHHHHHHHHHHHHhccccccccC
Confidence 45689999999965 44445 678889999999999999999997632 234788889999877 234
Q ss_pred CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccC
Q 008093 232 KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLA 311 (578)
Q Consensus 232 ~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~ 311 (578)
..+++++||||||.+++.++..+++ ++++|++++...
T Consensus 122 ~~~i~l~G~S~Gg~~a~~~a~~~p~---v~~~v~~~p~~~---------------------------------------- 158 (262)
T 1jfr_A 122 ATRLGVMGHSMGGGGSLEAAKSRTS---LKAAIPLTGWNT---------------------------------------- 158 (262)
T ss_dssp EEEEEEEEETHHHHHHHHHHHHCTT---CSEEEEESCCCS----------------------------------------
T ss_pred cccEEEEEEChhHHHHHHHHhcCcc---ceEEEeecccCc----------------------------------------
Confidence 5689999999999999999999876 899998865321
Q ss_pred CHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCC-cchHHHhc--CCCEEE
Q 008093 312 NWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEA-IPWDECRA--NKNVVL 388 (578)
Q Consensus 312 d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~-~~~~~~~~--~~~~~l 388 (578)
...+.++++|+|+++|++|++++.+. ........ ..++++
T Consensus 159 -------------------------------------~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~l~~~~~~~~ 201 (262)
T 1jfr_A 159 -------------------------------------DKTWPELRTPTLVVGADGDTVAPVATHSKPFYESLPGSLDKAY 201 (262)
T ss_dssp -------------------------------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHHSCTTSCEEE
T ss_pred -------------------------------------cccccccCCCEEEEecCccccCCchhhHHHHHHHhhcCCCceE
Confidence 23456778999999999999999886 55432222 245799
Q ss_pred EEeCCCCccccccccccCcccHHHHHHHHHHhhcCC
Q 008093 389 ATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSS 424 (578)
Q Consensus 389 ~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~~ 424 (578)
.+++++||..+.+. ...+.+.+.+||++....
T Consensus 202 ~~~~~~~H~~~~~~----~~~~~~~i~~fl~~~l~~ 233 (262)
T 1jfr_A 202 LELRGASHFTPNTS----DTTIAKYSISWLKRFIDS 233 (262)
T ss_dssp EEETTCCTTGGGSC----CHHHHHHHHHHHHHHHSC
T ss_pred EEeCCCCcCCcccc----hHHHHHHHHHHHHHHhcC
Confidence 99999999998873 235889999999988754
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A | Back alignment and structure |
|---|
Probab=99.82 E-value=5.2e-20 Score=189.17 Aligned_cols=241 Identities=14% Similarity=0.130 Sum_probs=130.8
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCC-CCchHHHHHHHHHHHHHCCC-CcEE
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN-AGWTEDAREVIGYLHHEYPK-APLF 236 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~-~~~~~Dl~~~i~~l~~~~~~-~~i~ 236 (578)
.+|+|||+||+++ +...| +.++..|.+ +|+|+++|+||||.|+......|+ ..+.+|+.++++ ..+. .+++
T Consensus 42 ~~~~vvllHG~~~-~~~~w-~~~~~~L~~-~~~via~Dl~GhG~S~~~~~~~~~~~~~a~dl~~ll~----~l~~~~~~~ 114 (318)
T 2psd_A 42 AENAVIFLHGNAT-SSYLW-RHVVPHIEP-VARCIIPDLIGMGKSGKSGNGSYRLLDHYKYLTAWFE----LLNLPKKII 114 (318)
T ss_dssp TTSEEEEECCTTC-CGGGG-TTTGGGTTT-TSEEEEECCTTSTTCCCCTTSCCSHHHHHHHHHHHHT----TSCCCSSEE
T ss_pred CCCeEEEECCCCC-cHHHH-HHHHHHhhh-cCeEEEEeCCCCCCCCCCCCCccCHHHHHHHHHHHHH----hcCCCCCeE
Confidence 3468999999965 44445 667777765 479999999999999765322222 223344444444 3344 6899
Q ss_pred EEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchh---hh-hHHHhhHHHHHHHH---HHHHHhHHHHHhhhcc-ccc
Q 008093 237 AIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL---IG-DRFIGRRLIQKIYD---RALTIGLQDYAQLHEP-RYS 308 (578)
Q Consensus 237 lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~---~~-~~~l~~~~~~~~~~---~~l~~~l~~~~~~~~~-~l~ 308 (578)
++||||||.+++.+|.++|+ +|+++|++++..... .. .... .....+.. ..+......+.....+ ...
T Consensus 115 lvGhSmGg~ia~~~A~~~P~--~v~~lvl~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (318)
T 2psd_A 115 FVGHDWGAALAFHYAYEHQD--RIKAIVHMESVVDVIESWDEWPDIE--EDIALIKSEEGEKMVLENNFFVETVLPSKIM 190 (318)
T ss_dssp EEEEEHHHHHHHHHHHHCTT--SEEEEEEEEECCSCBSCCTTSCSCH--HHHHHHHSTHHHHHHTTTCHHHHTHHHHTCS
T ss_pred EEEEChhHHHHHHHHHhChH--hhheEEEeccccCCccchhhhhhHH--HHHHHHhcccchhhhhcchHHHHhhcccccc
Confidence 99999999999999999999 899999987421110 00 0000 00000000 0000000000000000 000
Q ss_pred ccCCHHHHhc----c--C--C---HHHHHhhhhhccCC-C-CCHHHHHHhCCcccccCCC-ccceEEEEeCCCCCCCCCC
Q 008093 309 RLANWEGIKK----S--R--S---IRDFDSHATCLVGK-F-ETVDTYYRNCSSSTYVGNV-SIPLLCISSLDDPVCTVEA 374 (578)
Q Consensus 309 ~~~d~~~i~~----~--~--s---~~efd~~~~~~~~g-~-~~~~~yy~~~s~~~~l~~I-~vPvLiI~g~dDpivp~~~ 374 (578)
.....+.+.. . . . ...+.... ...+ . ........ .....+.++ ++|+|+|+|++| +++. .
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~--~~~~~l~~i~~~P~Lvi~G~~D-~~~~-~ 264 (318)
T 2psd_A 191 RKLEPEEFAAYLEPFKEKGEVRRPTLSWPREI--PLVKGGKPDVVQIVR--NYNAYLRASDDLPKLFIESDPG-FFSN-A 264 (318)
T ss_dssp SCCCHHHHHHHHGGGCSSSGGGHHHHHHHHTC--CBTTTSCHHHHHHHH--HHHHHHHTCTTSCEEEEEEEEC-SSHH-H
T ss_pred ccCCHHHHHHHHHhhcCccccccchhcccccc--cccccccchhHHHHH--HHHHHhccccCCCeEEEEeccc-cCcH-H
Confidence 0000000000 0 0 0 00000000 0000 0 00000000 011345677 999999999999 8876 3
Q ss_pred cchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhc
Q 008093 375 IPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 375 ~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~ 422 (578)
. .......++.+++++ ++||+.+.|. | ..+.+.|.+||++..
T Consensus 265 ~-~~~~~~~~~~~~~~i-~~gH~~~~e~--p--~~~~~~i~~fl~~~~ 306 (318)
T 2psd_A 265 I-VEGAKKFPNTEFVKV-KGLHFLQEDA--P--DEMGKYIKSFVERVL 306 (318)
T ss_dssp H-HHHHTTSSSEEEEEE-EESSSGGGTC--H--HHHHHHHHHHHHHHH
T ss_pred H-HHHHHhCCCcEEEEe-cCCCCCHhhC--H--HHHHHHHHHHHHHhh
Confidence 3 334566788888888 7899998883 3 369999999998754
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.2e-20 Score=198.37 Aligned_cols=271 Identities=12% Similarity=0.029 Sum_probs=152.9
Q ss_pred EEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHH----hCCc---eEEEEeC
Q 008093 125 FRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTA----KRGW---NVVVSNH 197 (578)
Q Consensus 125 l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~----~~Gy---~Vvv~D~ 197 (578)
+...||..+.+..+.+.+.. ..+.+..+|+||++||+++ +...| ..++..|. +.|| +|+++|+
T Consensus 25 ~~~~dg~~l~~~~~g~~~~~--------~~~~~~~~~~vvllHG~~~-~~~~~-~~~~~~L~~~~~~~G~~~~~vi~~D~ 94 (398)
T 2y6u_A 25 LCATDRLELTYDVYTSAERQ--------RRSRTATRLNLVFLHGSGM-SKVVW-EYYLPRLVAADAEGNYAIDKVLLIDQ 94 (398)
T ss_dssp SSTTCCCEEEEEEEEESCTT--------TCCTTCEEEEEEEECCTTC-CGGGG-GGGGGGSCCCBTTTTEEEEEEEEECC
T ss_pred ccCCCceEEEEEEEecCCCC--------CCCCCCCCCeEEEEcCCCC-cHHHH-HHHHHHHHHhhhhcCcceeEEEEEcC
Confidence 44678999988766543200 0001133579999999965 44455 67778887 4489 9999999
Q ss_pred CCCCCCCCCCCC--CCCCCc---hHHHHHHHHHHHHHCCCC--cEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 198 RGLGGVSITSDC--FYNAGW---TEDAREVIGYLHHEYPKA--PLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 198 RG~G~S~~~~~~--~~~~~~---~~Dl~~~i~~l~~~~~~~--~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
||||.|...... .....+ .+|+.++++.+....+.. +++++||||||.+++.++..+|+ +|+++|+++++.
T Consensus 95 ~G~G~S~~~~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~ 172 (398)
T 2y6u_A 95 VNHGDSAVRNRGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPN--LFHLLILIEPVV 172 (398)
T ss_dssp TTSHHHHHHTTTTBCSCCCHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCTT--SCSEEEEESCCC
T ss_pred CCCCCCCCCCccccCCCCCcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCch--heeEEEEecccc
Confidence 999998653221 111223 345555555433211223 49999999999999999999998 899999999866
Q ss_pred chhh--------hhHH---HhhHHHHHHHHHH-----HHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhh------
Q 008093 271 DLLI--------GDRF---IGRRLIQKIYDRA-----LTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSH------ 328 (578)
Q Consensus 271 d~~~--------~~~~---l~~~~~~~~~~~~-----l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~------ 328 (578)
.... .... ....+...+.... -...+....... .+....+... ...+...
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~------~~~~~~~~~~~~~ 244 (398)
T 2y6u_A 173 ITRKAIGAGRPGLPPDSPQIPENLYNSLRLKTCDHFANESEYVKYMRNG--SFFTNAHSQI------LQNIIDFERTKAS 244 (398)
T ss_dssp SCCCCCSCCCTTCCTTCCCCCHHHHHHHHHTCCCEESSHHHHHHHHHHT--STTTTSCHHH------HHHHHHHHEEC--
T ss_pred ccccccccccccccccccccchhhHHHhhhhccccCCCHHHHHHHhhcC--cccccCCHHH------HHHHHHhcCcccc
Confidence 5311 0000 0000000000000 000000000000 0000000000 0000000
Q ss_pred --------hhhc------cCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCC
Q 008093 329 --------ATCL------VGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHG 394 (578)
Q Consensus 329 --------~~~~------~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~G 394 (578)
+... ...+...... .......+.+|++|+|+|+|++|+++|.+.... .....+++++.+++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~i~~PvLii~G~~D~~~~~~~~~~-l~~~~~~~~~~~~~~~ 321 (398)
T 2y6u_A 245 GDDEDGGPVRTKMEQAQNLLCYMNMQTF--APFLISNVKFVRKRTIHIVGARSNWCPPQNQLF-LQKTLQNYHLDVIPGG 321 (398)
T ss_dssp ------CCEEESSCHHHHHHTTSCGGGT--HHHHHHHGGGCCSEEEEEEETTCCSSCHHHHHH-HHHHCSSEEEEEETTC
T ss_pred ccccCCCceEecCCchhhhhhhcccccc--hHHHHHhccccCCCEEEEEcCCCCCCCHHHHHH-HHHhCCCceEEEeCCC
Confidence 0000 0001100000 000124577899999999999999999875543 4566789999999999
Q ss_pred CccccccccccCcccHHHHHHHHHHhhc
Q 008093 395 GHLAFFEGLTAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 395 GH~~~~eg~~~~~~w~~~~v~eFL~~~~ 422 (578)
||+.++|. +..+.+.|.+||+...
T Consensus 322 gH~~~~e~----p~~~~~~i~~fl~~~~ 345 (398)
T 2y6u_A 322 SHLVNVEA----PDLVIERINHHIHEFV 345 (398)
T ss_dssp CTTHHHHS----HHHHHHHHHHHHHHHH
T ss_pred CccchhcC----HHHHHHHHHHHHHHHH
Confidence 99999883 3358899999998764
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=2e-19 Score=185.44 Aligned_cols=243 Identities=12% Similarity=0.031 Sum_probs=153.4
Q ss_pred CCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeC
Q 008093 118 FSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 197 (578)
Q Consensus 118 ~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~ 197 (578)
+..++..++..||..+...++.|.+. +...|+||++||++++... + .....++++||.|+++|+
T Consensus 66 ~~~~~~~~~~~dg~~i~~~~~~P~~~-------------~~~~p~vv~~HG~g~~~~~-~--~~~~~l~~~G~~v~~~d~ 129 (337)
T 1vlq_A 66 VEAYDVTFSGYRGQRIKGWLLVPKLE-------------EEKLPCVVQYIGYNGGRGF-P--HDWLFWPSMGYICFVMDT 129 (337)
T ss_dssp EEEEEEEEECGGGCEEEEEEEEECCS-------------CSSEEEEEECCCTTCCCCC-G--GGGCHHHHTTCEEEEECC
T ss_pred eEEEEEEEEcCCCCEEEEEEEecCCC-------------CCCccEEEEEcCCCCCCCC-c--hhhcchhhCCCEEEEecC
Confidence 34566667778999999887766431 2457899999999665433 2 344567788999999999
Q ss_pred CCCCCCCCC--CCC------------CCC-----------CCchHHHHHHHHHHHHHCC--CCcEEEEEEchHHHHHHHH
Q 008093 198 RGLGGVSIT--SDC------------FYN-----------AGWTEDAREVIGYLHHEYP--KAPLFAIGTSIGANILVKY 250 (578)
Q Consensus 198 RG~G~S~~~--~~~------------~~~-----------~~~~~Dl~~~i~~l~~~~~--~~~i~lvGhSmGG~ial~y 250 (578)
||+|.|... ... ... ....+|+.++++++.++.. ..+++++||||||.+++.+
T Consensus 130 rG~g~s~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~la~~~ 209 (337)
T 1vlq_A 130 RGQGSGWLKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAV 209 (337)
T ss_dssp TTCCCSSSCCCCCBCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHH
T ss_pred CCCCCcccCCCCcccccccCCCCCCcccccCCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeCHHHHHHHHH
Confidence 999966432 111 000 0235799999999987642 3589999999999999999
Q ss_pred HhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhh
Q 008093 251 LGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHAT 330 (578)
Q Consensus 251 a~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~ 330 (578)
+...+ +++++|++++..+............ .+. .+..+.... .....++.
T Consensus 210 a~~~p---~v~~~vl~~p~~~~~~~~~~~~~~~---~~~-----~~~~~~~~~---------------~~~~~~~~---- 259 (337)
T 1vlq_A 210 SALSK---KAKALLCDVPFLCHFRRAVQLVDTH---PYA-----EITNFLKTH---------------RDKEEIVF---- 259 (337)
T ss_dssp HHHCS---SCCEEEEESCCSCCHHHHHHHCCCT---THH-----HHHHHHHHC---------------TTCHHHHH----
T ss_pred HhcCC---CccEEEECCCcccCHHHHHhcCCCc---chH-----HHHHHHHhC---------------chhHHHHH----
Confidence 99887 4899998887554321100000000 000 000000000 00000000
Q ss_pred hccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccH
Q 008093 331 CLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWW 410 (578)
Q Consensus 331 ~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~ 410 (578)
..+...++...+.++++|+|+++|++|+++|.+...........++++.+++++||....+ ..
T Consensus 260 ----------~~~~~~~~~~~~~~i~~P~lii~G~~D~~~p~~~~~~~~~~l~~~~~~~~~~~~gH~~~~~-------~~ 322 (337)
T 1vlq_A 260 ----------RTLSYFDGVNFAARAKIPALFSVGLMDNICPPSTVFAAYNYYAGPKEIRIYPYNNHEGGGS-------FQ 322 (337)
T ss_dssp ----------HHHHTTCHHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCCSSEEEEEETTCCTTTTHH-------HH
T ss_pred ----------HhhhhccHHHHHHHcCCCEEEEeeCCCCCCCchhHHHHHHhcCCCcEEEEcCCCCCCCcch-------hh
Confidence 0111223445567889999999999999999875444333444468999999999985332 24
Q ss_pred HHHHHHHHHhhcC
Q 008093 411 VRAVNEYLGVLHS 423 (578)
Q Consensus 411 ~~~v~eFL~~~~~ 423 (578)
.+.+.+||.+...
T Consensus 323 ~~~~~~fl~~~l~ 335 (337)
T 1vlq_A 323 AVEQVKFLKKLFE 335 (337)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHh
Confidence 5788888887653
|
| >2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.4e-19 Score=194.61 Aligned_cols=107 Identities=19% Similarity=0.135 Sum_probs=76.3
Q ss_pred CCcEEEEECCCCCCCcc--HHHHHHHH---HHHhCCceEEEEeCCC--CCCCCCCCC-----CC--C-------C-CCch
Q 008093 159 TTPIAIVIPGLTSDSAA--SYIRHLVF---NTAKRGWNVVVSNHRG--LGGVSITSD-----CF--Y-------N-AGWT 216 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~--~yi~~l~~---~l~~~Gy~Vvv~D~RG--~G~S~~~~~-----~~--~-------~-~~~~ 216 (578)
..|+||++||+++++.. +| ..++. .|...||+|+++|+|| +|.|..... .. | . ..+.
T Consensus 108 ~~p~vvllHG~~~~~~~~~~w-~~~~~~~~~L~~~~~~Vi~~D~~G~~~G~S~~~~~~~~~~~~~~~~~~f~~~t~~~~a 186 (444)
T 2vat_A 108 RDNCVIVCHTLTSSAHVTSWW-PTLFGQGRAFDTSRYFIICLNYLGSPFGSAGPCSPDPDAEGQRPYGAKFPRTTIRDDV 186 (444)
T ss_dssp SCCEEEEECCTTCCSCGGGTC-GGGBSTTSSBCTTTCEEEEECCTTCSSSSSSTTSBCTTTC--CBCGGGCCCCCHHHHH
T ss_pred CCCeEEEECCCCcccchhhHH-HHhcCccchhhccCCEEEEecCCCCCCCCCCCCCCCcccccccccccccccccHHHHH
Confidence 45789999999776654 24 44543 4557899999999999 687753211 00 1 1 1223
Q ss_pred HHHHHHHHHHHHHCCCCc-EEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcch
Q 008093 217 EDAREVIGYLHHEYPKAP-LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~~~~-i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~ 272 (578)
+|+.++++++ +..+ ++++||||||.+++.+|.++|+ +|+++|+++++...
T Consensus 187 ~dl~~ll~~l----~~~~~~~lvGhSmGG~ial~~A~~~p~--~v~~lVli~~~~~~ 237 (444)
T 2vat_A 187 RIHRQVLDRL----GVRQIAAVVGASMGGMHTLEWAFFGPE--YVRKIVPIATSCRQ 237 (444)
T ss_dssp HHHHHHHHHH----TCCCEEEEEEETHHHHHHHHHGGGCTT--TBCCEEEESCCSBC
T ss_pred HHHHHHHHhc----CCccceEEEEECHHHHHHHHHHHhChH--hhheEEEEeccccC
Confidence 4555555444 3457 9999999999999999999998 89999999987654
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.9e-19 Score=182.76 Aligned_cols=101 Identities=17% Similarity=0.254 Sum_probs=75.2
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCC----CC-CCchHHHHHHHHHHHHHCCCCc
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCF----YN-AGWTEDAREVIGYLHHEYPKAP 234 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~----~~-~~~~~Dl~~~i~~l~~~~~~~~ 234 (578)
.|+||++||+++ +...| +.++..|. .+|+|+++|+||||.|....... |. ....+|+.++++ ..+..+
T Consensus 25 g~~~vllHG~~~-~~~~w-~~~~~~l~-~~~~vi~~Dl~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~----~l~~~~ 97 (291)
T 3qyj_A 25 GAPLLLLHGYPQ-THVMW-HKIAPLLA-NNFTVVATDLRGYGDSSRPASVPHHINYSKRVMAQDQVEVMS----KLGYEQ 97 (291)
T ss_dssp SSEEEEECCTTC-CGGGG-TTTHHHHT-TTSEEEEECCTTSTTSCCCCCCGGGGGGSHHHHHHHHHHHHH----HTTCSS
T ss_pred CCeEEEECCCCC-CHHHH-HHHHHHHh-CCCEEEEEcCCCCCCCCCCCCCccccccCHHHHHHHHHHHHH----HcCCCC
Confidence 467999999965 45555 66777775 58999999999999997543321 11 112244444443 344568
Q ss_pred EEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCC
Q 008093 235 LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSP 269 (578)
Q Consensus 235 i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p 269 (578)
++++||||||.+++.++..+|+ +|+++|+++++
T Consensus 98 ~~l~GhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~ 130 (291)
T 3qyj_A 98 FYVVGHDRGARVAHRLALDHPH--RVKKLALLDIA 130 (291)
T ss_dssp EEEEEETHHHHHHHHHHHHCTT--TEEEEEEESCC
T ss_pred EEEEEEChHHHHHHHHHHhCch--hccEEEEECCC
Confidence 9999999999999999999999 89999999864
|
| >4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.4e-18 Score=184.27 Aligned_cols=123 Identities=12% Similarity=0.107 Sum_probs=92.0
Q ss_pred EEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhC---------CceEEE
Q 008093 124 LFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKR---------GWNVVV 194 (578)
Q Consensus 124 ~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~---------Gy~Vvv 194 (578)
..+.-||..+++....++ .++.++||++||++|+... | ..++..|.+. ||+|++
T Consensus 71 ~~~~i~g~~i~~~~~~~~---------------~~~~~plll~HG~~~s~~~-~-~~~~~~L~~~~~~~~~~~~~~~vi~ 133 (388)
T 4i19_A 71 FTTEIDGATIHFLHVRSP---------------EPDATPMVITHGWPGTPVE-F-LDIIGPLTDPRAHGGDPADAFHLVI 133 (388)
T ss_dssp EEEEETTEEEEEEEECCS---------------STTCEEEEEECCTTCCGGG-G-HHHHHHHHCGGGGTSCGGGCEEEEE
T ss_pred EEEEECCeEEEEEEccCC---------------CCCCCeEEEECCCCCCHHH-H-HHHHHHHhCcccccCCCCCCeEEEE
Confidence 444558988886554332 2456789999999765554 4 5778888776 999999
Q ss_pred EeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcC
Q 008093 195 SNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICS 268 (578)
Q Consensus 195 ~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~ 268 (578)
+|+||||.|+......+. .+++.+.+..+.+..+..+++++||||||.+++.++.++|+ +|++++++++
T Consensus 134 ~dl~G~G~S~~~~~~~~~---~~~~a~~~~~l~~~lg~~~~~l~G~S~Gg~ia~~~a~~~p~--~v~~lvl~~~ 202 (388)
T 4i19_A 134 PSLPGFGLSGPLKSAGWE---LGRIAMAWSKLMASLGYERYIAQGGDIGAFTSLLLGAIDPS--HLAGIHVNLL 202 (388)
T ss_dssp ECCTTSGGGCCCSSCCCC---HHHHHHHHHHHHHHTTCSSEEEEESTHHHHHHHHHHHHCGG--GEEEEEESSC
T ss_pred EcCCCCCCCCCCCCCCCC---HHHHHHHHHHHHHHcCCCcEEEEeccHHHHHHHHHHHhChh--hceEEEEecC
Confidence 999999999765432222 34555555555555566789999999999999999999998 8999999985
|
| >3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.8e-19 Score=180.80 Aligned_cols=235 Identities=14% Similarity=0.096 Sum_probs=153.9
Q ss_pred CCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECC--CCCCCccHHHHHHHHHHHhCCceEEEE
Q 008093 118 FSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPG--LTSDSAASYIRHLVFNTAKRGWNVVVS 195 (578)
Q Consensus 118 ~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHG--l~G~s~~~yi~~l~~~l~~~Gy~Vvv~ 195 (578)
.+.+...+...||..+.++.+ ++... ....+...|+||++|| +.+++...| ..++..|+++||+|+++
T Consensus 17 ~~~~~v~~~~~~g~~~~~~~y-p~~~~--------~~~~~~~~p~vv~lHGgg~~~~~~~~~-~~~~~~l~~~G~~v~~~ 86 (283)
T 3bjr_A 17 FQGMQVIKQKLTATCAQLTGY-LHQPD--------TNAHQTNLPAIIIVPGGSYTHIPVAQA-ESLAMAFAGHGYQAFYL 86 (283)
T ss_dssp CCSSEEEEEECTTSSCEEEEE-EC----------------CCEEEEEEECCSTTTCCCHHHH-HHHHHHHHTTTCEEEEE
T ss_pred CCCcceEEeecCCCceeEEEe-cCCcc--------ccccCCCCcEEEEECCCccccCCcccc-HHHHHHHHhCCcEEEEE
Confidence 344666777788888888888 53210 0012356799999999 434454445 77889999999999999
Q ss_pred eCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC-----CCCcEEEEEEchHHHHHHHHHhhcCCC-----------CC
Q 008093 196 NHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY-----PKAPLFAIGTSIGANILVKYLGEEGEK-----------TP 259 (578)
Q Consensus 196 D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~-----~~~~i~lvGhSmGG~ial~ya~~~p~~-----------~~ 259 (578)
|+||+|.+.. ......+|+.++++++.+.. +..+++++||||||.+++.++..+++. .+
T Consensus 87 d~~g~~~~~~-----~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~ 161 (283)
T 3bjr_A 87 EYTLLTDQQP-----LGLAPVLDLGRAVNLLRQHAAEWHIDPQQITPAGFSVGGHIVALYNDYWATRVATELNVTPAMLK 161 (283)
T ss_dssp ECCCTTTCSS-----CBTHHHHHHHHHHHHHHHSHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTTHHHHHHTCCHHHHC
T ss_pred eccCCCcccc-----CchhHHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHHHHHHHHHHhhccccchhhcCCCcCCCC
Confidence 9999988630 01234578999999887632 234899999999999999999998862 13
Q ss_pred ccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCH
Q 008093 260 VAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETV 339 (578)
Q Consensus 260 V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~ 339 (578)
++++|++++..+....... .. ..+... .+
T Consensus 162 ~~~~v~~~p~~~~~~~~~~-------~~-----------------~~~~~~-----------------------~~---- 190 (283)
T 3bjr_A 162 PNNVVLGYPVISPLLGFPK-------DD-----------------ATLATW-----------------------TP---- 190 (283)
T ss_dssp CSSEEEESCCCCTTSBC--------------------------------CC-----------------------CC----
T ss_pred ccEEEEcCCcccccccccc-------cc-----------------chHHHH-----------------------HH----
Confidence 8899999887764321000 00 000000 00
Q ss_pred HHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcch---HHHhcCCCEEEEEeCCCCccccccccc---------cCc
Q 008093 340 DTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPW---DECRANKNVVLATTWHGGHLAFFEGLT---------AAG 407 (578)
Q Consensus 340 ~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~---~~~~~~~~~~l~~~~~GGH~~~~eg~~---------~~~ 407 (578)
.+...+....+.++++|+|+++|++|+++|.+.... .......++++.+++++||....+... +..
T Consensus 191 --~~~~~~~~~~~~~~~~P~lii~G~~D~~~p~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~ 268 (283)
T 3bjr_A 191 --TPNELAADQHVNSDNQPTFIWTTADDPIVPATNTLAYATALATAKIPYELHVFKHGPHGLALANAQTAWKPDANQPHV 268 (283)
T ss_dssp --CGGGGCGGGSCCTTCCCEEEEEESCCTTSCTHHHHHHHHHHHHTTCCEEEEEECCCSHHHHHHHHHHSCC-------C
T ss_pred --HhHhcCHHHhccCCCCCEEEEEcCCCCCCChHHHHHHHHHHHHCCCCeEEEEeCCCCcccccccccccccccccchhH
Confidence 011223345577889999999999999999764332 223445678999999999966554210 112
Q ss_pred ccHHHHHHHHHHh
Q 008093 408 MWWVRAVNEYLGV 420 (578)
Q Consensus 408 ~w~~~~v~eFL~~ 420 (578)
..+.+.+.+||++
T Consensus 269 ~~~~~~i~~fl~~ 281 (283)
T 3bjr_A 269 AHWLTLALEWLAD 281 (283)
T ss_dssp CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh
Confidence 3567788899875
|
| >3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba} | Back alignment and structure |
|---|
Probab=99.80 E-value=7e-19 Score=179.80 Aligned_cols=173 Identities=13% Similarity=0.083 Sum_probs=136.8
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH------C--
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHE------Y-- 230 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~------~-- 230 (578)
..|+||++||+++ +...| ..++..|.++||.|+++|+||+|.++. ...+|+.++++++... .
T Consensus 95 ~~p~vv~~HG~~~-~~~~~-~~~~~~la~~G~~vv~~d~~g~g~s~~--------~~~~d~~~~~~~l~~~~~~~~~~~~ 164 (306)
T 3vis_A 95 TYGAIAISPGYTG-TQSSI-AWLGERIASHGFVVIAIDTNTTLDQPD--------SRARQLNAALDYMLTDASSAVRNRI 164 (306)
T ss_dssp CEEEEEEECCTTC-CHHHH-HHHHHHHHTTTEEEEEECCSSTTCCHH--------HHHHHHHHHHHHHHHTSCHHHHTTE
T ss_pred CCCEEEEeCCCcC-CHHHH-HHHHHHHHhCCCEEEEecCCCCCCCcc--------hHHHHHHHHHHHHHhhcchhhhccC
Confidence 5789999999954 45555 789999999999999999999998742 2347889999998875 2
Q ss_pred CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhccccccc
Q 008093 231 PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRL 310 (578)
Q Consensus 231 ~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~ 310 (578)
+..+++++||||||.+++.++..+++ ++++|++++...
T Consensus 165 ~~~~v~l~G~S~GG~~a~~~a~~~p~---v~~~v~~~~~~~--------------------------------------- 202 (306)
T 3vis_A 165 DASRLAVMGHSMGGGGTLRLASQRPD---LKAAIPLTPWHL--------------------------------------- 202 (306)
T ss_dssp EEEEEEEEEETHHHHHHHHHHHHCTT---CSEEEEESCCCS---------------------------------------
T ss_pred CcccEEEEEEChhHHHHHHHHhhCCC---eeEEEEeccccC---------------------------------------
Confidence 34689999999999999999999876 899998865321
Q ss_pred CCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCC-CcchHHHhcCC--CEE
Q 008093 311 ANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVE-AIPWDECRANK--NVV 387 (578)
Q Consensus 311 ~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~-~~~~~~~~~~~--~~~ 387 (578)
...+.++++|+|+++|++|+++|.+ ........... +++
T Consensus 203 --------------------------------------~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~l~~~~~~~ 244 (306)
T 3vis_A 203 --------------------------------------NKSWRDITVPTLIIGAEYDTIASVTLHSKPFYNSIPSPTDKA 244 (306)
T ss_dssp --------------------------------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHTCCTTSCEE
T ss_pred --------------------------------------ccccccCCCCEEEEecCCCcccCcchhHHHHHHHhccCCCce
Confidence 1235677899999999999999987 34433333333 688
Q ss_pred EEEeCCCCccccccccccCcccHHHHHHHHHHhhcCCC
Q 008093 388 LATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSSP 425 (578)
Q Consensus 388 l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~~~ 425 (578)
+.+++++||..+.+. ...+.+.+.+||++.....
T Consensus 245 ~~~~~g~gH~~~~~~----~~~~~~~i~~fl~~~l~~~ 278 (306)
T 3vis_A 245 YLELDGASHFAPNIT----NKTIGMYSVAWLKRFVDED 278 (306)
T ss_dssp EEEETTCCTTGGGSC----CHHHHHHHHHHHHHHHSCC
T ss_pred EEEECCCCccchhhc----hhHHHHHHHHHHHHHccCc
Confidence 999999999988772 2358889999999887654
|
| >4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1.4e-18 Score=173.53 Aligned_cols=211 Identities=15% Similarity=0.108 Sum_probs=133.0
Q ss_pred CCeeEEEEEe-cCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEe
Q 008093 118 FSYRRQLFRL-SDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSN 196 (578)
Q Consensus 118 ~~y~r~~l~~-~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D 196 (578)
+..+.+.++. .||.+|....+.|.+ ....|+||++||.+++....++..+++.|+++||.|+++|
T Consensus 27 ~~~~e~~~~~~~dG~~i~g~l~~P~~--------------~~~~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D 92 (259)
T 4ao6_A 27 LSVQERGFSLEVDGRTVPGVYWSPAE--------------GSSDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAID 92 (259)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEEESS--------------SCCSEEEEEEC--------CHHHHHHHHHHHTTEEEEEEC
T ss_pred CCceEEEEEEeeCCeEEEEEEEeCCC--------------CCCCCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeec
Confidence 3444444544 599999876666533 2456999999999665444455888999999999999999
Q ss_pred CCCCCCCCCCCCCCCCC-------------------CchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCC
Q 008093 197 HRGLGGVSITSDCFYNA-------------------GWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEK 257 (578)
Q Consensus 197 ~RG~G~S~~~~~~~~~~-------------------~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~ 257 (578)
+||||.+.......... ....|..++++++....+..++.++|+||||.+++.+++..|.
T Consensus 93 ~rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~l~~l~~~~d~~rv~~~G~S~GG~~a~~~a~~~pr- 171 (259)
T 4ao6_A 93 GPGHGERASVQAGREPTDVVGLDAFPRMWHEGGGTAAVIADWAAALDFIEAEEGPRPTGWWGLSMGTMMGLPVTASDKR- 171 (259)
T ss_dssp CCC-------------CCGGGSTTHHHHHHHTTHHHHHHHHHHHHHHHHHHHHCCCCEEEEECTHHHHHHHHHHHHCTT-
T ss_pred cCCCCCCCCcccccccchhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHhhhccCCceEEEEeechhHHHHHHHHhcCCc-
Confidence 99999886542211100 0124677778888777777899999999999999999998875
Q ss_pred CCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCC
Q 008093 258 TPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFE 337 (578)
Q Consensus 258 ~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~ 337 (578)
++++|+.......... .
T Consensus 172 --i~Aav~~~~~~~~~~~-----------------------------------------------~-------------- 188 (259)
T 4ao6_A 172 --IKVALLGLMGVEGVNG-----------------------------------------------E-------------- 188 (259)
T ss_dssp --EEEEEEESCCTTSTTH-----------------------------------------------H--------------
T ss_pred --eEEEEEeccccccccc-----------------------------------------------c--------------
Confidence 8887765433221100 0
Q ss_pred CHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcch-HHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHH
Q 008093 338 TVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPW-DECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNE 416 (578)
Q Consensus 338 ~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~-~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~e 416 (578)
+....+.+|++|+|+++|++|+++|.+.... ......+...+.+++ |||..... ....+.+.+
T Consensus 189 ---------~~~~~a~~i~~P~Li~hG~~D~~vp~~~~~~l~~al~~~~k~l~~~~-G~H~~~p~------~e~~~~~~~ 252 (259)
T 4ao6_A 189 ---------DLVRLAPQVTCPVRYLLQWDDELVSLQSGLELFGKLGTKQKTLHVNP-GKHSAVPT------WEMFAGTVD 252 (259)
T ss_dssp ---------HHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCCSSEEEEEES-SCTTCCCH------HHHTHHHHH
T ss_pred ---------chhhhhccCCCCEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEeC-CCCCCcCH------HHHHHHHHH
Confidence 0012245678999999999999999875433 233345677777777 57754322 135578889
Q ss_pred HHHhhc
Q 008093 417 YLGVLH 422 (578)
Q Consensus 417 FL~~~~ 422 (578)
||++-+
T Consensus 253 fl~~hL 258 (259)
T 4ao6_A 253 YLDQRL 258 (259)
T ss_dssp HHHHHC
T ss_pred HHHHhc
Confidence 998753
|
| >2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.80 E-value=6.1e-19 Score=183.14 Aligned_cols=103 Identities=17% Similarity=0.233 Sum_probs=82.9
Q ss_pred CCcEEEEECCCCCCCcc-HHHHHHHHHHHhCCceEEEEe----CCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCC
Q 008093 159 TTPIAIVIPGLTSDSAA-SYIRHLVFNTAKRGWNVVVSN----HRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKA 233 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~-~yi~~l~~~l~~~Gy~Vvv~D----~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~ 233 (578)
.+|+||++||++++... .|+..++..| +.||+|+++| +||||.|... ...+|+.++++++.+..+..
T Consensus 37 ~~~~vvllHG~~~~~~~~~~~~~l~~~L-~~g~~Vi~~Dl~~D~~G~G~S~~~-------~~~~d~~~~~~~l~~~l~~~ 108 (335)
T 2q0x_A 37 ARRCVLWVGGQTESLLSFDYFTNLAEEL-QGDWAFVQVEVPSGKIGSGPQDHA-------HDAEDVDDLIGILLRDHCMN 108 (335)
T ss_dssp SSSEEEEECCTTCCTTCSTTHHHHHHHH-TTTCEEEEECCGGGBTTSCSCCHH-------HHHHHHHHHHHHHHHHSCCC
T ss_pred CCcEEEEECCCCccccchhHHHHHHHHH-HCCcEEEEEeccCCCCCCCCcccc-------CcHHHHHHHHHHHHHHcCCC
Confidence 45789999999654432 3447788888 6799999994 6999998531 24589999999998877788
Q ss_pred cEEEEEEchHHHHHHHHHhh--cCCCCCccEEEEEcCCcc
Q 008093 234 PLFAIGTSIGANILVKYLGE--EGEKTPVAGAAAICSPWD 271 (578)
Q Consensus 234 ~i~lvGhSmGG~ial~ya~~--~p~~~~V~~~Vlis~p~d 271 (578)
+++++||||||.+++.++.+ +|+ +|+++|++++..+
T Consensus 109 ~~~LvGhSmGG~iAl~~A~~~~~p~--rV~~lVL~~~~~~ 146 (335)
T 2q0x_A 109 EVALFATSTGTQLVFELLENSAHKS--SITRVILHGVVCD 146 (335)
T ss_dssp CEEEEEEGGGHHHHHHHHHHCTTGG--GEEEEEEEEECCC
T ss_pred cEEEEEECHhHHHHHHHHHhccchh--ceeEEEEECCccc
Confidence 99999999999999999984 576 8999999987543
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P | Back alignment and structure |
|---|
Probab=99.80 E-value=1.6e-18 Score=177.51 Aligned_cols=107 Identities=18% Similarity=0.229 Sum_probs=80.7
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHh-CCceEEEEeCCCCCCCCCCCCCCCC-CCchHHHHHHHHHHHHHCCCCcEE
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAK-RGWNVVVSNHRGLGGVSITSDCFYN-AGWTEDAREVIGYLHHEYPKAPLF 236 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~-~Gy~Vvv~D~RG~G~S~~~~~~~~~-~~~~~Dl~~~i~~l~~~~~~~~i~ 236 (578)
.+|+||++||++ ++...| ..++..|.+ .+|+|+++|+||||.|+......++ ..+.+|+.++++.+.... ..+++
T Consensus 37 ~~p~lvllHG~~-~~~~~w-~~~~~~L~~~~~~~via~Dl~GhG~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~-~~~~~ 113 (316)
T 3c5v_A 37 EGPVLLLLHGGG-HSALSW-AVFTAAIISRVQCRIVALDLRSHGETKVKNPEDLSAETMAKDVGNVVEAMYGDL-PPPIM 113 (316)
T ss_dssp SSCEEEEECCTT-CCGGGG-HHHHHHHHTTBCCEEEEECCTTSTTCBCSCTTCCCHHHHHHHHHHHHHHHHTTC-CCCEE
T ss_pred CCcEEEEECCCC-cccccH-HHHHHHHhhcCCeEEEEecCCCCCCCCCCCccccCHHHHHHHHHHHHHHHhccC-CCCeE
Confidence 357899999995 455556 678888876 3899999999999999764333333 345688888888875322 15899
Q ss_pred EEEEchHHHHHHHHHhhcCCCCCccEEEEEcCC
Q 008093 237 AIGTSIGANILVKYLGEEGEKTPVAGAAAICSP 269 (578)
Q Consensus 237 lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p 269 (578)
++||||||.+++.+|.++... .|+++|++++.
T Consensus 114 lvGhSmGG~ia~~~A~~~~~p-~v~~lvl~~~~ 145 (316)
T 3c5v_A 114 LIGHSMGGAIAVHTASSNLVP-SLLGLCMIDVV 145 (316)
T ss_dssp EEEETHHHHHHHHHHHTTCCT-TEEEEEEESCC
T ss_pred EEEECHHHHHHHHHHhhccCC-CcceEEEEccc
Confidence 999999999999999874211 39999999764
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1.2e-18 Score=186.45 Aligned_cols=244 Identities=15% Similarity=0.114 Sum_probs=151.4
Q ss_pred CeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCC
Q 008093 119 SYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHR 198 (578)
Q Consensus 119 ~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~R 198 (578)
+.++..++. ||+.+....+.|.+ +.+.|+||++||++++....| ..++..+.++||+|+++|+|
T Consensus 167 ~~~~v~i~~-~g~~l~~~~~~P~~--------------~~~~P~vv~~hG~~~~~~~~~-~~~~~~l~~~G~~V~~~D~~ 230 (415)
T 3mve_A 167 IIKQLEIPF-EKGKITAHLHLTNT--------------DKPHPVVIVSAGLDSLQTDMW-RLFRDHLAKHDIAMLTVDMP 230 (415)
T ss_dssp EEEEEEEEC-SSSEEEEEEEESCS--------------SSCEEEEEEECCTTSCGGGGH-HHHHHTTGGGTCEEEEECCT
T ss_pred CeEEEEEEE-CCEEEEEEEEecCC--------------CCCCCEEEEECCCCccHHHHH-HHHHHHHHhCCCEEEEECCC
Confidence 445556665 78888877776533 246799999999965545555 56778888899999999999
Q ss_pred CCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhh
Q 008093 199 GLGGVSITSDCFYNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGD 276 (578)
Q Consensus 199 G~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~ 276 (578)
|+|.|..... ...+......+++++.... +..+++++||||||++++.++..+++ +|+++|+++++.+.....
T Consensus 231 G~G~s~~~~~---~~~~~~~~~~v~~~l~~~~~vd~~~i~l~G~S~GG~~a~~~a~~~~~--~v~~~v~~~~~~~~~~~~ 305 (415)
T 3mve_A 231 SVGYSSKYPL---TEDYSRLHQAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQE--KIKACVILGAPIHDIFAS 305 (415)
T ss_dssp TSGGGTTSCC---CSCTTHHHHHHHHHGGGCTTEEEEEEEEEEETHHHHHHHHHHHHTTT--TCCEEEEESCCCSHHHHC
T ss_pred CCCCCCCCCC---CCCHHHHHHHHHHHHHhCcCCCCCcEEEEEECHHHHHHHHHHHhCCc--ceeEEEEECCcccccccc
Confidence 9999865321 1223345566777776543 24689999999999999999998887 899999999986543221
Q ss_pred HHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCc
Q 008093 277 RFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVS 356 (578)
Q Consensus 277 ~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~ 356 (578)
....... ...+...+ ....... .....++..... .+... ...... +.+++
T Consensus 306 ~~~~~~~-~~~~~~~~----~~~~g~~---------------~~~~~~~~~~~~----~~~~~-----~~~~~~-~~~i~ 355 (415)
T 3mve_A 306 PQKLQQM-PKMYLDVL----ASRLGKS---------------VVDIYSLSGQMA----AWSLK-----VQGFLS-SRKTK 355 (415)
T ss_dssp HHHHTTS-CHHHHHHH----HHHTTCS---------------SBCHHHHHHHGG----GGCTT-----TTTTTT-SSCBS
T ss_pred HHHHHHh-HHHHHHHH----HHHhCCC---------------ccCHHHHHHHHh----hcCcc-----cccccc-cCCCC
Confidence 1110000 00000000 0000000 001111111110 00000 000001 46889
Q ss_pred cceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCC-CccccccccccCcccHHHHHHHHHHhhc
Q 008093 357 IPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHG-GHLAFFEGLTAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 357 vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~G-GH~~~~eg~~~~~~w~~~~v~eFL~~~~ 422 (578)
+|+|+++|++|+++|.+.... .....++.++.+++++ +|.. . ..+.+.+.+||++..
T Consensus 356 ~PvLii~G~~D~~vp~~~~~~-l~~~~~~~~l~~i~g~~~h~~-~-------~~~~~~i~~fL~~~L 413 (415)
T 3mve_A 356 VPILAMSLEGDPVSPYSDNQM-VAFFSTYGKAKKISSKTITQG-Y-------EQSLDLAIKWLEDEL 413 (415)
T ss_dssp SCEEEEEETTCSSSCHHHHHH-HHHTBTTCEEEEECCCSHHHH-H-------HHHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCCCCCCHHHHHH-HHHhCCCceEEEecCCCcccc-h-------HHHHHHHHHHHHHHh
Confidence 999999999999999875543 4456788999999983 3321 1 136788899998754
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1.2e-18 Score=193.28 Aligned_cols=241 Identities=15% Similarity=0.100 Sum_probs=165.4
Q ss_pred CeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCC-ccHHHHHHHHHHHhCCceEEEEeC
Q 008093 119 SYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDS-AASYIRHLVFNTAKRGWNVVVSNH 197 (578)
Q Consensus 119 ~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s-~~~yi~~l~~~l~~~Gy~Vvv~D~ 197 (578)
+.++..++..||..+....+.|.+. +...|+||++||.+++. ...| ..++..|+++||.|+++|+
T Consensus 332 ~~~~~~~~~~~g~~i~~~~~~p~~~-------------~~~~p~vv~~HG~~~~~~~~~~-~~~~~~l~~~G~~v~~~d~ 397 (582)
T 3o4h_A 332 GSRLVWVESFDGSRVPTYVLESGRA-------------PTPGPTVVLVHGGPFAEDSDSW-DTFAASLAAAGFHVVMPNY 397 (582)
T ss_dssp EEEEEEEECTTSCEEEEEEEEETTS-------------CSSEEEEEEECSSSSCCCCSSC-CHHHHHHHHTTCEEEEECC
T ss_pred cceEEEEECCCCCEEEEEEEcCCCC-------------CCCCcEEEEECCCccccccccc-CHHHHHHHhCCCEEEEecc
Confidence 3456677788999998888776431 23679999999975543 2233 6788899999999999999
Q ss_pred CC---CCCCCCCC-CCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchh
Q 008093 198 RG---LGGVSITS-DCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL 273 (578)
Q Consensus 198 RG---~G~S~~~~-~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~ 273 (578)
|| +|.+.... ...+.....+|+.++++++.++....+++++||||||.+++.++..+++ +++++|++++..+..
T Consensus 398 rG~~~~G~s~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~i~l~G~S~GG~~a~~~a~~~p~--~~~~~v~~~~~~~~~ 475 (582)
T 3o4h_A 398 RGSTGYGEEWRLKIIGDPCGGELEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTMKPG--LFKAGVAGASVVDWE 475 (582)
T ss_dssp TTCSSSCHHHHHTTTTCTTTHHHHHHHHHHHHHHHTTCEEEEEEEEETHHHHHHHHHHHHSTT--TSSCEEEESCCCCHH
T ss_pred CCCCCCchhHHhhhhhhcccccHHHHHHHHHHHHhCCCcceEEEEEECHHHHHHHHHHhcCCC--ceEEEEEcCCccCHH
Confidence 99 55442111 1112223468999999999887432389999999999999999999888 899999999877653
Q ss_pred hhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccC
Q 008093 274 IGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVG 353 (578)
Q Consensus 274 ~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~ 353 (578)
........ .+. .+.+.. .+ ...+.+...++...+.
T Consensus 476 ~~~~~~~~-----~~~----------------------------------~~~~~~----~~--~~~~~~~~~sp~~~~~ 510 (582)
T 3o4h_A 476 EMYELSDA-----AFR----------------------------------NFIEQL----TG--GSREIMRSRSPINHVD 510 (582)
T ss_dssp HHHHTCCH-----HHH----------------------------------HHHHHH----TT--TCHHHHHHTCGGGGGG
T ss_pred HHhhcccc-----hhH----------------------------------HHHHHH----cC--cCHHHHHhcCHHHHHh
Confidence 21100000 000 000000 01 1223445566777888
Q ss_pred CCccceEEEEeCCCCCCCCCCcch---HHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcC
Q 008093 354 NVSIPLLCISSLDDPVCTVEAIPW---DECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHS 423 (578)
Q Consensus 354 ~I~vPvLiI~g~dDpivp~~~~~~---~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~ 423 (578)
++++|+|+++|++|+++|.+.... .......++++.+++++||..+.. .....+.+.+.+||++...
T Consensus 511 ~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~---~~~~~~~~~i~~fl~~~l~ 580 (582)
T 3o4h_A 511 RIKEPLALIHPQNASRTPLKPLLRLMGELLARGKTFEAHIIPDAGHAINTM---EDAVKILLPAVFFLATQRE 580 (582)
T ss_dssp GCCSCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEETTCCSSCCBH---HHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEEecCCCCCcCHHHHHHHHHHHHhCCCCEEEEEECCCCCCCCCh---HHHHHHHHHHHHHHHHHcC
Confidence 999999999999999999764332 233445679999999999987622 1223577899999987653
|
| >2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon} | Back alignment and structure |
|---|
Probab=99.80 E-value=1e-18 Score=178.17 Aligned_cols=252 Identities=13% Similarity=0.003 Sum_probs=152.6
Q ss_pred CCCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCC--CCCccHHHHHHHHHHHhC-CceEE
Q 008093 117 CFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLT--SDSAASYIRHLVFNTAKR-GWNVV 193 (578)
Q Consensus 117 ~~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~--G~s~~~yi~~l~~~l~~~-Gy~Vv 193 (578)
....++..+..+|| .+..+++.|.. ....|+||++||.+ .++...| ..++..+++. ||+|+
T Consensus 45 ~~~~~~~~i~~~~g-~i~~~~~~p~~--------------~~~~p~vv~~HGgg~~~g~~~~~-~~~~~~la~~~g~~v~ 108 (311)
T 2c7b_A 45 IAETRDVHIPVSGG-SIRARVYFPKK--------------AAGLPAVLYYHGGGFVFGSIETH-DHICRRLSRLSDSVVV 108 (311)
T ss_dssp CSEEEEEEEEETTE-EEEEEEEESSS--------------CSSEEEEEEECCSTTTSCCTGGG-HHHHHHHHHHHTCEEE
T ss_pred cceEEEEEecCCCC-cEEEEEEecCC--------------CCCCcEEEEECCCcccCCChhhh-HHHHHHHHHhcCCEEE
Confidence 34566667777777 88888887643 23468999999974 0344445 6778888775 99999
Q ss_pred EEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC-----CCCcEEEEEEchHHHHHHHHHhhcCCC--CCccEEEEE
Q 008093 194 VSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY-----PKAPLFAIGTSIGANILVKYLGEEGEK--TPVAGAAAI 266 (578)
Q Consensus 194 v~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~-----~~~~i~lvGhSmGG~ial~ya~~~p~~--~~V~~~Vli 266 (578)
++|+||+|.+... ...+|+.++++++.+.. +..+++++||||||++++.++...++. ..++++|++
T Consensus 109 ~~d~rg~g~~~~~-------~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~ 181 (311)
T 2c7b_A 109 SVDYRLAPEYKFP-------TAVEDAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAAVVSILDRNSGEKLVKKQVLI 181 (311)
T ss_dssp EECCCCTTTSCTT-------HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEE
T ss_pred EecCCCCCCCCCC-------ccHHHHHHHHHHHHhhHHHhCCCchhEEEEecCccHHHHHHHHHHHHhcCCCCceeEEEE
Confidence 9999999987432 24578888888887642 235899999999999999998876542 258999999
Q ss_pred cCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhC
Q 008093 267 CSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNC 346 (578)
Q Consensus 267 s~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~ 346 (578)
++..+........... +. .. .... ..... ...+...+... ...... ...
T Consensus 182 ~p~~~~~~~~~~~~~~-----~~--------~~----~~~~---~~~~~------~~~~~~~~~~~---~~~~~~--~~~ 230 (311)
T 2c7b_A 182 YPVVNMTGVPTASLVE-----FG--------VA----ETTS---LPIEL------MVWFGRQYLKR---PEEAYD--FKA 230 (311)
T ss_dssp SCCCCCSSCCCHHHHH-----HH--------HC----TTCS---SCHHH------HHHHHHHHCSS---TTGGGS--TTT
T ss_pred CCccCCccccccCCcc-----HH--------Hh----ccCC---CCHHH------HHHHHHHhCCC---CccccC--ccc
Confidence 9887631100000000 00 00 0000 00000 00000000000 000000 001
Q ss_pred Cc-ccccCCCccceEEEEeCCCCCCCCCC-cchHHHhcCCCEEEEEeCCCCcccccc-ccccCcccHHHHHHHHHHhhcC
Q 008093 347 SS-STYVGNVSIPLLCISSLDDPVCTVEA-IPWDECRANKNVVLATTWHGGHLAFFE-GLTAAGMWWVRAVNEYLGVLHS 423 (578)
Q Consensus 347 s~-~~~l~~I~vPvLiI~g~dDpivp~~~-~~~~~~~~~~~~~l~~~~~GGH~~~~e-g~~~~~~w~~~~v~eFL~~~~~ 423 (578)
++ ...+..+. |+|+++|++|++++... ..........++++.+++++||..... +..+....+.+.+.+||++...
T Consensus 231 ~p~~~~l~~~~-P~lii~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 309 (311)
T 2c7b_A 231 SPLLADLGGLP-PALVVTAEYDPLRDEGELYAYKMKASGSRAVAVRFAGMVHGFVSFYPFVDAGREALDLAAASIRSGLQ 309 (311)
T ss_dssp CGGGSCCTTCC-CEEEEEETTCTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHTC
T ss_pred CcccccccCCC-cceEEEcCCCCchHHHHHHHHHHHHCCCCEEEEEeCCCccccccccccCHHHHHHHHHHHHHHHHHhc
Confidence 11 12344454 99999999999987431 222344567789999999999976521 1112234577889999987653
|
| >4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.79 E-value=3e-19 Score=170.46 Aligned_cols=187 Identities=12% Similarity=0.082 Sum_probs=115.2
Q ss_pred cEEEEECCCCCCCccHHHHHHHHHHHhC--CceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEE
Q 008093 161 PIAIVIPGLTSDSAASYIRHLVFNTAKR--GWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAI 238 (578)
Q Consensus 161 PiVVllHGl~G~s~~~yi~~l~~~l~~~--Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lv 238 (578)
|+||++||++|+..+.....+...+.+. ||+|+++|+||+|.+ ..+.++.+....+..+++++
T Consensus 3 ptIl~lHGf~ss~~s~k~~~l~~~~~~~~~~~~v~~pdl~~~g~~---------------~~~~l~~~~~~~~~~~i~l~ 67 (202)
T 4fle_A 3 STLLYIHGFNSSPSSAKATTFKSWLQQHHPHIEMQIPQLPPYPAE---------------AAEMLESIVMDKAGQSIGIV 67 (202)
T ss_dssp CEEEEECCTTCCTTCHHHHHHHHHHHHHCTTSEEECCCCCSSHHH---------------HHHHHHHHHHHHTTSCEEEE
T ss_pred cEEEEeCCCCCCCCccHHHHHHHHHHHcCCCcEEEEeCCCCCHHH---------------HHHHHHHHHHhcCCCcEEEE
Confidence 7899999997766655446666777665 499999999999842 22333333333456799999
Q ss_pred EEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhc
Q 008093 239 GTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKK 318 (578)
Q Consensus 239 GhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~ 318 (578)
|+||||.+++.+|.+++. .+..++...++.+.... ............ .
T Consensus 68 G~SmGG~~a~~~a~~~~~--~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~---~ 115 (202)
T 4fle_A 68 GSSLGGYFATWLSQRFSI--PAVVVNPAVRPFELLSD---------------------------YLGENQNPYTGQ---K 115 (202)
T ss_dssp EETHHHHHHHHHHHHTTC--CEEEESCCSSHHHHGGG---------------------------GCEEEECTTTCC---E
T ss_pred EEChhhHHHHHHHHHhcc--cchheeeccchHHHHHH---------------------------hhhhhccccccc---c
Confidence 999999999999999987 44444333222111000 000000000000 0
Q ss_pred cCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccc
Q 008093 319 SRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLA 398 (578)
Q Consensus 319 ~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~ 398 (578)
... ..............+.++++|+|+|+|++|.+||.+... +..++.++.++++|||.
T Consensus 116 ~~~----------------~~~~~~~~~~~~~~~~~~~~P~LiihG~~D~~Vp~~~s~----~l~~~~~l~i~~g~~H~- 174 (202)
T 4fle_A 116 YVL----------------ESRHIYDLKAMQIEKLESPDLLWLLQQTGDEVLDYRQAV----AYYTPCRQTVESGGNHA- 174 (202)
T ss_dssp EEE----------------CHHHHHHHHTTCCSSCSCGGGEEEEEETTCSSSCHHHHH----HHTTTSEEEEESSCCTT-
T ss_pred ccc----------------hHHHHHHHHhhhhhhhccCceEEEEEeCCCCCCCHHHHH----HHhhCCEEEEECCCCcC-
Confidence 000 000001111233557788999999999999999976432 23467899999999993
Q ss_pred cccccccCcccHHHHHHHHHHh
Q 008093 399 FFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 399 ~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
+ ++ .+ .+.+.|.+||+-
T Consensus 175 ~-~~--~~--~~~~~I~~FL~~ 191 (202)
T 4fle_A 175 F-VG--FD--HYFSPIVTFLGL 191 (202)
T ss_dssp C-TT--GG--GGHHHHHHHHTC
T ss_pred C-CC--HH--HHHHHHHHHHhh
Confidence 3 32 22 356789999973
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.4e-18 Score=197.66 Aligned_cols=238 Identities=17% Similarity=0.116 Sum_probs=163.4
Q ss_pred CeeEEEEEecCC-cEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCC--ccHHH-H---HHHHHHHhCCce
Q 008093 119 SYRRQLFRLSDG-GMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDS--AASYI-R---HLVFNTAKRGWN 191 (578)
Q Consensus 119 ~y~r~~l~~~DG-~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s--~~~yi-~---~l~~~l~~~Gy~ 191 (578)
..+...++..|| ..+.+.++.|.+. ......|+||++||.+++. ...|. . .++..|+++||.
T Consensus 486 ~~~~~~~~~~~g~~~l~~~~~~P~~~-----------~~~~~~p~vv~~hG~~~~~~~~~~~~~~~~~~~~~~l~~~G~~ 554 (741)
T 2ecf_A 486 PVEFGTLTAADGKTPLNYSVIKPAGF-----------DPAKRYPVAVYVYGGPASQTVTDSWPGRGDHLFNQYLAQQGYV 554 (741)
T ss_dssp CEEEEEEECTTSSCEEEEEEECCSSC-----------CTTSCEEEEEECCCSTTCCSCSSCCCCSHHHHHHHHHHHTTCE
T ss_pred CcEEEEEEcCCCCEEEEEEEEeCCCC-----------CCCCCcCEEEEEcCCCCcccccccccccchhHHHHHHHhCCCE
Confidence 456667888899 8999888776431 0124568999999986653 12231 0 467888899999
Q ss_pred EEEEeCCCCCCCCCCCCCC----CCCCchHHHHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEE
Q 008093 192 VVVSNHRGLGGVSITSDCF----YNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAA 265 (578)
Q Consensus 192 Vvv~D~RG~G~S~~~~~~~----~~~~~~~Dl~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vl 265 (578)
|+++|+||+|.+....... +.....+|+.++++++.++. +..+++++||||||.+++.++..+|+ +++++|+
T Consensus 555 v~~~d~rG~g~s~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~--~~~~~v~ 632 (741)
T 2ecf_A 555 VFSLDNRGTPRRGRDFGGALYGKQGTVEVADQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKASD--SYACGVA 632 (741)
T ss_dssp EEEECCTTCSSSCHHHHHTTTTCTTTHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCTT--TCSEEEE
T ss_pred EEEEecCCCCCCChhhhHHHhhhcccccHHHHHHHHHHHHhcCCCChhhEEEEEEChHHHHHHHHHHhCCC--ceEEEEE
Confidence 9999999999975321111 11123589999999998753 34689999999999999999999988 8999999
Q ss_pred EcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHh
Q 008093 266 ICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRN 345 (578)
Q Consensus 266 is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~ 345 (578)
+++..+...... .+.. .+.. ... ...+.|..
T Consensus 633 ~~~~~~~~~~~~---------~~~~-------~~~~---------~~~------------------------~~~~~~~~ 663 (741)
T 2ecf_A 633 GAPVTDWGLYDS---------HYTE-------RYMD---------LPA------------------------RNDAGYRE 663 (741)
T ss_dssp ESCCCCGGGSBH---------HHHH-------HHHC---------CTG------------------------GGHHHHHH
T ss_pred cCCCcchhhhcc---------ccch-------hhcC---------Ccc------------------------cChhhhhh
Confidence 998776432110 0000 0000 000 00122333
Q ss_pred CCcccccCCCccceEEEEeCCCCCCCCCCcchH---HHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhc
Q 008093 346 CSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWD---ECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 346 ~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~---~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~ 422 (578)
.++...+.++++|+|+++|++|+++|.+..... ......++++.+++++||..+.+. + ..+.+.+.+||++.+
T Consensus 664 ~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~--~--~~~~~~i~~fl~~~l 739 (741)
T 2ecf_A 664 ARVLTHIEGLRSPLLLIHGMADDNVLFTNSTSLMSALQKRGQPFELMTYPGAKHGLSGAD--A--LHRYRVAEAFLGRCL 739 (741)
T ss_dssp HCSGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCSSCCHHH--H--HHHHHHHHHHHHHHH
T ss_pred cCHHHHHhhCCCCEEEEccCCCCCCCHHHHHHHHHHHHHCCCceEEEEECCCCCCCCCCc--h--hHHHHHHHHHHHHhc
Confidence 455667888999999999999999998743321 223445679999999999887663 2 357889999998754
|
| >1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.79 E-value=7.8e-19 Score=169.70 Aligned_cols=183 Identities=15% Similarity=0.078 Sum_probs=129.3
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEE-------------------eCCCCCCCCCCCCCCCCCCchHH
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVS-------------------NHRGLGGVSITSDCFYNAGWTED 218 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~-------------------D~RG~G~S~~~~~~~~~~~~~~D 218 (578)
..+|+||++||+++ +...| ..++..+.+.||+|+++ |+||+ .+.............+|
T Consensus 21 ~~~~~vv~lHG~~~-~~~~~-~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~w~d~~g~-~~~~~~~~~~~~~~~~~ 97 (232)
T 1fj2_A 21 KATAAVIFLHGLGD-TGHGW-AEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGL-SPDSQEDESGIKQAAEN 97 (232)
T ss_dssp CCSEEEEEECCSSS-CHHHH-HHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCC-STTCCBCHHHHHHHHHH
T ss_pred CCCceEEEEecCCC-ccchH-HHHHHHHhcCCcEEEecCCCccccccccccccccccccccC-CcccccccHHHHHHHHH
Confidence 56789999999954 44445 77888888889999998 66766 22211111111233467
Q ss_pred HHHHHHHHHHHCC--CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhH
Q 008093 219 AREVIGYLHHEYP--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGL 296 (578)
Q Consensus 219 l~~~i~~l~~~~~--~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l 296 (578)
+.++++++.+ ++ ..+++++||||||.+++.++..+++ +++++|++++..+....
T Consensus 98 ~~~~i~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~--~v~~~i~~~~~~~~~~~--------------------- 153 (232)
T 1fj2_A 98 IKALIDQEVK-NGIPSNRIILGGFSQGGALSLYTALTTQQ--KLAGVTALSCWLPLRAS--------------------- 153 (232)
T ss_dssp HHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHTTCSS--CCSEEEEESCCCTTGGG---------------------
T ss_pred HHHHHHHHhc-CCCCcCCEEEEEECHHHHHHHHHHHhCCC--ceeEEEEeecCCCCCcc---------------------
Confidence 7788887765 43 3689999999999999999999887 89999999876543110
Q ss_pred HHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcc
Q 008093 297 QDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIP 376 (578)
Q Consensus 297 ~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~ 376 (578)
+. .....+.++++|+|+++|++|++++.+...
T Consensus 154 ----------~~--------------------------------------~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~ 185 (232)
T 1fj2_A 154 ----------FP--------------------------------------QGPIGGANRDISILQCHGDCDPLVPLMFGS 185 (232)
T ss_dssp ----------SC--------------------------------------SSCCCSTTTTCCEEEEEETTCSSSCHHHHH
T ss_pred ----------cc--------------------------------------ccccccccCCCCEEEEecCCCccCCHHHHH
Confidence 00 011245678899999999999999976433
Q ss_pred h---HHHhcC--CCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcC
Q 008093 377 W---DECRAN--KNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHS 423 (578)
Q Consensus 377 ~---~~~~~~--~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~ 423 (578)
. ...... +++++.+++++||..+.+ ..+.+.+||++...
T Consensus 186 ~~~~~l~~~~~~~~~~~~~~~~~~H~~~~~--------~~~~i~~~l~~~l~ 229 (232)
T 1fj2_A 186 LTVEKLKTLVNPANVTFKTYEGMMHSSCQQ--------EMMDVKQFIDKLLP 229 (232)
T ss_dssp HHHHHHHHHSCGGGEEEEEETTCCSSCCHH--------HHHHHHHHHHHHSC
T ss_pred HHHHHHHHhCCCCceEEEEeCCCCcccCHH--------HHHHHHHHHHHhcC
Confidence 2 122223 569999999999987544 33789999987654
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A | Back alignment and structure |
|---|
Probab=99.78 E-value=1.8e-18 Score=162.09 Aligned_cols=169 Identities=13% Similarity=0.104 Sum_probs=125.1
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCc---eEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEE
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGW---NVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLF 236 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy---~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~ 236 (578)
+|+||++||++++ ...| ..++..|.+.|| +|+++|+||+|.+.. ...+++.+.+..+.+.++..+++
T Consensus 3 ~~~vv~~HG~~~~-~~~~-~~~~~~l~~~G~~~~~v~~~d~~g~g~s~~--------~~~~~~~~~~~~~~~~~~~~~~~ 72 (181)
T 1isp_A 3 HNPVVMVHGIGGA-SFNF-AGIKSYLVSQGWSRDKLYAVDFWDKTGTNY--------NNGPVLSRFVQKVLDETGAKKVD 72 (181)
T ss_dssp CCCEEEECCTTCC-GGGG-HHHHHHHHHTTCCGGGEEECCCSCTTCCHH--------HHHHHHHHHHHHHHHHHCCSCEE
T ss_pred CCeEEEECCcCCC-HhHH-HHHHHHHHHcCCCCccEEEEecCCCCCchh--------hhHHHHHHHHHHHHHHcCCCeEE
Confidence 4679999999654 4455 688999999998 799999999998742 12245555555555555667899
Q ss_pred EEEEchHHHHHHHHHhhc--CCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHH
Q 008093 237 AIGTSIGANILVKYLGEE--GEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWE 314 (578)
Q Consensus 237 lvGhSmGG~ial~ya~~~--p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~ 314 (578)
++||||||.+++.++.++ ++ +++++|+++++...... ..+
T Consensus 73 lvG~S~Gg~~a~~~~~~~~~~~--~v~~~v~~~~~~~~~~~-----------------------------~~~------- 114 (181)
T 1isp_A 73 IVAHSMGGANTLYYIKNLDGGN--KVANVVTLGGANRLTTG-----------------------------KAL------- 114 (181)
T ss_dssp EEEETHHHHHHHHHHHHSSGGG--TEEEEEEESCCGGGTCS-----------------------------BCC-------
T ss_pred EEEECccHHHHHHHHHhcCCCc--eEEEEEEEcCccccccc-----------------------------ccC-------
Confidence 999999999999999887 55 89999999987543110 000
Q ss_pred HHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCC
Q 008093 315 GIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHG 394 (578)
Q Consensus 315 ~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~G 394 (578)
.+ .....++|+|+++|++|+++|.+. ...++.++.+++++
T Consensus 115 -------------------~~---------------~~~~~~~p~l~i~G~~D~~v~~~~------~~~~~~~~~~~~~~ 154 (181)
T 1isp_A 115 -------------------PG---------------TDPNQKILYTSIYSSADMIVMNYL------SRLDGARNVQIHGV 154 (181)
T ss_dssp -------------------CC---------------SCTTCCCEEEEEEETTCSSSCHHH------HCCBTSEEEEESSC
T ss_pred -------------------CC---------------CCCccCCcEEEEecCCCccccccc------ccCCCCcceeeccC
Confidence 00 001235799999999999998752 23577899999999
Q ss_pred CccccccccccCcccHHHHHHHHHHhh
Q 008093 395 GHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 395 GH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
||+.+.+. + .+.+.+.+||++.
T Consensus 155 gH~~~~~~--~---~~~~~i~~fl~~~ 176 (181)
T 1isp_A 155 GHIGLLYS--S---QVNSLIKEGLNGG 176 (181)
T ss_dssp CTGGGGGC--H---HHHHHHHHHHTTT
T ss_pred chHhhccC--H---HHHHHHHHHHhcc
Confidence 99998873 2 4888999998764
|
| >4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A | Back alignment and structure |
|---|
Probab=99.78 E-value=1.8e-19 Score=183.43 Aligned_cols=225 Identities=13% Similarity=0.122 Sum_probs=146.9
Q ss_pred eEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCC--CCCccHHHHHHHHHHHhCCceEEEEeCC
Q 008093 121 RRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLT--SDSAASYIRHLVFNTAKRGWNVVVSNHR 198 (578)
Q Consensus 121 ~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~--G~s~~~yi~~l~~~l~~~Gy~Vvv~D~R 198 (578)
.+..+... +..+.++++.|.+. ....|+||++||.+ +++...| ..++..++++||.|+++|+|
T Consensus 57 ~~~~i~y~-~~~~~~~~~~p~~~-------------~~~~p~vv~~HGgg~~~~~~~~~-~~~~~~l~~~G~~v~~~d~r 121 (303)
T 4e15_A 57 TVDHLRYG-EGRQLVDVFYSEKT-------------TNQAPLFVFVHGGYWQEMDMSMS-CSIVGPLVRRGYRVAVMDYN 121 (303)
T ss_dssp EEEEEECS-STTCEEEEEECTTC-------------CTTCCEEEEECCSTTTSCCGGGS-CTTHHHHHHTTCEEEEECCC
T ss_pred ceeeeccC-CCCcEEEEEecCCC-------------CCCCCEEEEECCCcCcCCChhHH-HHHHHHHHhCCCEEEEecCC
Confidence 34455555 66667788776431 35679999999932 2344444 56788888999999999999
Q ss_pred CCCCCCCCCCCCCCCCchHHHHHHHHHHHH---HCCCCcEEEEEEchHHHHHHHHHhhcCCC-----CCccEEEEEcCCc
Q 008093 199 GLGGVSITSDCFYNAGWTEDAREVIGYLHH---EYPKAPLFAIGTSIGANILVKYLGEEGEK-----TPVAGAAAICSPW 270 (578)
Q Consensus 199 G~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~---~~~~~~i~lvGhSmGG~ial~ya~~~p~~-----~~V~~~Vlis~p~ 270 (578)
|+|.+.. ....+|+.++++++.+ .++..+++++||||||.+++.++...... .+++++|++++.+
T Consensus 122 ~~~~~~~-------~~~~~d~~~~~~~l~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~~~~~ 194 (303)
T 4e15_A 122 LCPQVTL-------EQLMTQFTHFLNWIFDYTEMTKVSSLTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFLCGVY 194 (303)
T ss_dssp CTTTSCH-------HHHHHHHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHGGGGGCTTTSCHHHHHTEEEEEEESCCC
T ss_pred CCCCCCh-------hHHHHHHHHHHHHHHHHhhhcCCCeEEEEeecHHHHHHHHHHhccccccCcccccccEEEEEeeee
Confidence 9987532 1345899999999876 56677999999999999999998765421 1699999999988
Q ss_pred chhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcc-
Q 008093 271 DLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSS- 349 (578)
Q Consensus 271 d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~- 349 (578)
+....... .......... .. .+.+...++.
T Consensus 195 ~~~~~~~~------------------------~~~~~~~~~~-------~~------------------~~~~~~~sp~~ 225 (303)
T 4e15_A 195 DLRELSNL------------------------ESVNPKNILG-------LN------------------ERNIESVSPML 225 (303)
T ss_dssp CCHHHHTC------------------------TTTSGGGTTC-------CC------------------TTTTTTTCGGG
T ss_pred ccHhhhcc------------------------cccchhhhhc-------CC------------------HHHHHHcCchh
Confidence 76321000 0000000000 00 0000122233
Q ss_pred cccCCC----ccceEEEEeCCCCCCCCCCcch---HHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHh
Q 008093 350 TYVGNV----SIPLLCISSLDDPVCTVEAIPW---DECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 350 ~~l~~I----~vPvLiI~g~dDpivp~~~~~~---~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
..+.++ ++|+|+++|++|++++.+.... .......++++.+++++||+.+++.... ....+.+||.+
T Consensus 226 ~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~----~~~~l~~~l~~ 299 (303)
T 4e15_A 226 WEYTDVTVWNSTKIYVVAAEHDSTTFIEQSRHYADVLRKKGYKASFTLFKGYDHFDIIEETAI----DDSDVSRFLRN 299 (303)
T ss_dssp CCCCCGGGGTTSEEEEEEEEESCHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETTHHHHGGGS----TTSHHHHHHHH
T ss_pred hcccccccCCCCCEEEEEeCCCCCCchHHHHHHHHHHHHCCCceEEEEeCCCCchHHHHHHhC----CCcHHHHHHHH
Confidence 344544 8999999999999988763332 2334456789999999999999986433 23445555543
|
| >2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.78 E-value=6.2e-19 Score=166.93 Aligned_cols=181 Identities=16% Similarity=0.066 Sum_probs=120.0
Q ss_pred CCcEEEEECCCCCCC--ccHHHHHHHHHHHhC-CceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCC-Cc
Q 008093 159 TTPIAIVIPGLTSDS--AASYIRHLVFNTAKR-GWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPK-AP 234 (578)
Q Consensus 159 ~~PiVVllHGl~G~s--~~~yi~~l~~~l~~~-Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~-~~ 234 (578)
++|+||++||++++. ...|...++..+.+. ||+|+++|+||++. ....+|+.++++ ..+. .+
T Consensus 3 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~d~~g~~~----------~~~~~~~~~~~~----~l~~~~~ 68 (194)
T 2qs9_A 3 SPSKAVIVPGNGGGDVTTHGWYGWVKKELEKIPGFQCLAKNMPDPIT----------ARESIWLPFMET----ELHCDEK 68 (194)
T ss_dssp CCCEEEEECCSSSSCTTTSTTHHHHHHHHTTSTTCCEEECCCSSTTT----------CCHHHHHHHHHH----TSCCCTT
T ss_pred CCCEEEEECCCCCCCcccchHHHHHHHHHhhccCceEEEeeCCCCCc----------ccHHHHHHHHHH----HhCcCCC
Confidence 457899999997763 233435578888887 99999999999642 123345554444 3344 68
Q ss_pred EEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHH
Q 008093 235 LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWE 314 (578)
Q Consensus 235 i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~ 314 (578)
++++||||||.+++.++.++| ++++|+++++........ . .. ...+....
T Consensus 69 ~~lvG~S~Gg~ia~~~a~~~p----v~~lvl~~~~~~~~~~~~-----------~-----~~-------~~~~~~~~--- 118 (194)
T 2qs9_A 69 TIIIGHSSGAIAAMRYAETHR----VYAIVLVSAYTSDLGDEN-----------E-----RA-------SGYFTRPW--- 118 (194)
T ss_dssp EEEEEETHHHHHHHHHHHHSC----CSEEEEESCCSSCTTCHH-----------H-----HH-------TSTTSSCC---
T ss_pred EEEEEcCcHHHHHHHHHHhCC----CCEEEEEcCCccccchhh-----------h-----HH-------Hhhhcccc---
Confidence 999999999999999999875 899999998764321100 0 00 00000000
Q ss_pred HHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCC
Q 008093 315 GIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHG 394 (578)
Q Consensus 315 ~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~G 394 (578)
.. ..+.++..|+|+++|++|+++|.+......... +.++.+++++
T Consensus 119 -----------------------~~----------~~~~~~~~p~lii~G~~D~~vp~~~~~~~~~~~--~~~~~~~~~~ 163 (194)
T 2qs9_A 119 -----------------------QW----------EKIKANCPYIVQFGSTDDPFLPWKEQQEVADRL--ETKLHKFTDC 163 (194)
T ss_dssp -----------------------CH----------HHHHHHCSEEEEEEETTCSSSCHHHHHHHHHHH--TCEEEEESSC
T ss_pred -----------------------cH----------HHHHhhCCCEEEEEeCCCCcCCHHHHHHHHHhc--CCeEEEeCCC
Confidence 00 112234679999999999999987554433333 6789999999
Q ss_pred CccccccccccCcccHHHHHHHHHHhhcC
Q 008093 395 GHLAFFEGLTAAGMWWVRAVNEYLGVLHS 423 (578)
Q Consensus 395 GH~~~~eg~~~~~~w~~~~v~eFL~~~~~ 423 (578)
||+.+.+. + ..+. .+.+||++...
T Consensus 164 gH~~~~~~--p--~~~~-~~~~fl~~~~~ 187 (194)
T 2qs9_A 164 GHFQNTEF--H--ELIT-VVKSLLKVPAL 187 (194)
T ss_dssp TTSCSSCC--H--HHHH-HHHHHHTCCCC
T ss_pred CCccchhC--H--HHHH-HHHHHHHhhhh
Confidence 99988772 2 2344 45599987543
|
| >1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31 | Back alignment and structure |
|---|
Probab=99.78 E-value=1.9e-18 Score=162.98 Aligned_cols=170 Identities=15% Similarity=0.126 Sum_probs=112.4
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEE
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAI 238 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lv 238 (578)
..|+||++||++++....|...+...|.++||+|+++|+|. +.. + ....+.+|+.++++. . ..+++++
T Consensus 3 g~p~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~~---~~~--~--~~~~~~~~~~~~~~~----~-~~~~~l~ 70 (192)
T 1uxo_A 3 GTKQVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMPN---PLQ--P--RLEDWLDTLSLYQHT----L-HENTYLV 70 (192)
T ss_dssp -CCEEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCSC---TTS--C--CHHHHHHHHHTTGGG----C-CTTEEEE
T ss_pred CCCEEEEEcCCCCCcchhHHHHHHHHHHhCCcEEEEecCCC---CCC--C--CHHHHHHHHHHHHHh----c-cCCEEEE
Confidence 35779999999766553453444456878899999999992 211 1 111233344433333 3 4689999
Q ss_pred EEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhc
Q 008093 239 GTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKK 318 (578)
Q Consensus 239 GhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~ 318 (578)
||||||.+++.++.++++..+++++|+++++....... +.+
T Consensus 71 G~S~Gg~~a~~~a~~~~~~~~v~~~v~~~~~~~~~~~~----------------------------~~~----------- 111 (192)
T 1uxo_A 71 AHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPTL----------------------------QML----------- 111 (192)
T ss_dssp EETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTTC----------------------------GGG-----------
T ss_pred EeCccHHHHHHHHHHhcccCCccEEEEeccCCCccccc----------------------------hhh-----------
Confidence 99999999999999988644699999998765432100 000
Q ss_pred cCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccc
Q 008093 319 SRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLA 398 (578)
Q Consensus 319 ~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~ 398 (578)
..|.. .. .....+.++++|+|+++|++|+++|.+.... ..... +.++.+++++||..
T Consensus 112 ----~~~~~--------~~---------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~-~~~~~-~~~~~~~~~~gH~~ 168 (192)
T 1uxo_A 112 ----DEFTQ--------GS---------FDHQKIIESAKHRAVIASKDDQIVPFSFSKD-LAQQI-DAALYEVQHGGHFL 168 (192)
T ss_dssp ----GGGTC--------SC---------CCHHHHHHHEEEEEEEEETTCSSSCHHHHHH-HHHHT-TCEEEEETTCTTSC
T ss_pred ----hhhhh--------cC---------CCHHHHHhhcCCEEEEecCCCCcCCHHHHHH-HHHhc-CceEEEeCCCcCcc
Confidence 00000 00 0012345667899999999999999875543 33334 78999999999999
Q ss_pred cccc
Q 008093 399 FFEG 402 (578)
Q Consensus 399 ~~eg 402 (578)
+.+.
T Consensus 169 ~~~~ 172 (192)
T 1uxo_A 169 EDEG 172 (192)
T ss_dssp GGGT
T ss_pred cccc
Confidence 8874
|
| >3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=1.1e-19 Score=182.11 Aligned_cols=105 Identities=13% Similarity=-0.007 Sum_probs=74.3
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEE
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAI 238 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lv 238 (578)
.+|+||++||+++ +...| ..++..|.+ ||+|+++|+||||.|...... ....+.+.++++.+....+..+++++
T Consensus 50 ~~~~lvllHG~~~-~~~~~-~~l~~~L~~-~~~v~~~D~~G~G~S~~~~~~---~~~~~~a~~~~~~l~~~~~~~~~~lv 123 (280)
T 3qmv_A 50 APLRLVCFPYAGG-TVSAF-RGWQERLGD-EVAVVPVQLPGRGLRLRERPY---DTMEPLAEAVADALEEHRLTHDYALF 123 (280)
T ss_dssp CSEEEEEECCTTC-CGGGG-TTHHHHHCT-TEEEEECCCTTSGGGTTSCCC---CSHHHHHHHHHHHHHHTTCSSSEEEE
T ss_pred CCceEEEECCCCC-ChHHH-HHHHHhcCC-CceEEEEeCCCCCCCCCCCCC---CCHHHHHHHHHHHHHHhCCCCCEEEE
Confidence 4488999999965 44456 678888876 999999999999998654221 12233333444444443366799999
Q ss_pred EEchHHHHHHHHHhhcCCCC--CccEEEEEcCC
Q 008093 239 GTSIGANILVKYLGEEGEKT--PVAGAAAICSP 269 (578)
Q Consensus 239 GhSmGG~ial~ya~~~p~~~--~V~~~Vlis~p 269 (578)
||||||.+++.+|.++++.. .+.++++++.+
T Consensus 124 G~S~Gg~va~~~a~~~p~~~~~~~~~l~l~~~~ 156 (280)
T 3qmv_A 124 GHSMGALLAYEVACVLRRRGAPRPRHLFVSGSR 156 (280)
T ss_dssp EETHHHHHHHHHHHHHHHTTCCCCSCEEEESCC
T ss_pred EeCHhHHHHHHHHHHHHHcCCCCceEEEEECCC
Confidence 99999999999999987621 12367766643
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=6.1e-18 Score=191.43 Aligned_cols=237 Identities=14% Similarity=0.089 Sum_probs=158.6
Q ss_pred CeeEEEEEecCC-cEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCc--cHHHHH---HHHHHHhCCceE
Q 008093 119 SYRRQLFRLSDG-GMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSA--ASYIRH---LVFNTAKRGWNV 192 (578)
Q Consensus 119 ~y~r~~l~~~DG-~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~--~~yi~~---l~~~l~~~Gy~V 192 (578)
..+...+...|| ..+....+.|++. ..+...|+||++||..++.. ..|... ++..|+++||+|
T Consensus 454 ~~~~~~~~~~~g~~~~~~~~~~P~~~-----------~~~~~~p~iv~~HGg~~~~~~~~~~~~~~~~~~~~la~~G~~v 522 (706)
T 2z3z_A 454 EIRTGTIMAADGQTPLYYKLTMPLHF-----------DPAKKYPVIVYVYGGPHAQLVTKTWRSSVGGWDIYMAQKGYAV 522 (706)
T ss_dssp CEEEEEEECTTSSSEEEEEEECCTTC-----------CTTSCEEEEEECCCCTTCCCCCSCC----CCHHHHHHHTTCEE
T ss_pred CcEEEEEEcCCCCEEEEEEEEeCCCC-----------CCCCCccEEEEecCCCCceeeccccccCchHHHHHHHhCCcEE
Confidence 345667778898 8888877766431 01234689999999755432 223222 678888899999
Q ss_pred EEEeCCCCCCCCCCCCC----CCCCCchHHHHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEE
Q 008093 193 VVSNHRGLGGVSITSDC----FYNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAI 266 (578)
Q Consensus 193 vv~D~RG~G~S~~~~~~----~~~~~~~~Dl~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vli 266 (578)
+++|+||+|.+...... .+.....+|+.++++++.+.. +..+++++||||||.+++.++..+|+ +++++|++
T Consensus 523 ~~~d~rG~g~s~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~--~~~~~v~~ 600 (706)
T 2z3z_A 523 FTVDSRGSANRGAAFEQVIHRRLGQTEMADQMCGVDFLKSQSWVDADRIGVHGWSYGGFMTTNLMLTHGD--VFKVGVAG 600 (706)
T ss_dssp EEECCTTCSSSCHHHHHTTTTCTTHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTT--TEEEEEEE
T ss_pred EEEecCCCcccchhHHHHHhhccCCccHHHHHHHHHHHHhCCCCCchheEEEEEChHHHHHHHHHHhCCC--cEEEEEEc
Confidence 99999999987532111 111123489999999987543 24589999999999999999999988 89999999
Q ss_pred cCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhC
Q 008093 267 CSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNC 346 (578)
Q Consensus 267 s~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~ 346 (578)
++..+...... .+.. .+.. .+ ....+.|...
T Consensus 601 ~~~~~~~~~~~---------~~~~-------~~~~--~~-------------------------------~~~~~~~~~~ 631 (706)
T 2z3z_A 601 GPVIDWNRYAI---------MYGE-------RYFD--AP-------------------------------QENPEGYDAA 631 (706)
T ss_dssp SCCCCGGGSBH---------HHHH-------HHHC--CT-------------------------------TTCHHHHHHH
T ss_pred CCccchHHHHh---------hhhh-------hhcC--Cc-------------------------------ccChhhhhhC
Confidence 88766432111 0000 0000 00 0001122334
Q ss_pred CcccccCCCccceEEEEeCCCCCCCCCCcch---HHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 347 SSSTYVGNVSIPLLCISSLDDPVCTVEAIPW---DECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 347 s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~---~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
++...+.++++|+|+++|++|+++|.+.... .......++++.+++++||..+.+ ....+.+.+.+||++.
T Consensus 632 ~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~----~~~~~~~~i~~fl~~~ 705 (706)
T 2z3z_A 632 NLLKRAGDLKGRLMLIHGAIDPVVVWQHSLLFLDACVKARTYPDYYVYPSHEHNVMGP----DRVHLYETITRYFTDH 705 (706)
T ss_dssp CGGGGGGGCCSEEEEEEETTCSSSCTHHHHHHHHHHHHHTCCCEEEEETTCCSSCCTT----HHHHHHHHHHHHHHHH
T ss_pred CHhHhHHhCCCCEEEEeeCCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcc----cHHHHHHHHHHHHHHh
Confidence 4566778899999999999999999874332 223345678999999999987665 1235788999999764
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.77 E-value=1.2e-17 Score=187.53 Aligned_cols=251 Identities=19% Similarity=0.141 Sum_probs=163.6
Q ss_pred eeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCC
Q 008093 120 YRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRG 199 (578)
Q Consensus 120 y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG 199 (578)
.++..+...||..+...++.|.+.. ...+.+...|+||++||.+++.....+..++..|+++||.|+++|+||
T Consensus 391 ~~~~~~~~~dg~~i~~~~~~P~~~~-------~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG 463 (662)
T 3azo_A 391 PQIRTFTAPDGREIHAHIYPPHSPD-------FTGPADELPPYVVMAHGGPTSRVPAVLDLDVAYFTSRGIGVADVNYGG 463 (662)
T ss_dssp CEEEEEECTTSCEEEEEEECCCCSS-------EECCTTCCCCEEEEECSSSSSCCCCSCCHHHHHHHTTTCEEEEEECTT
T ss_pred ceEEEEEcCCCCEEEEEEECCCCcc-------ccCCCCCCccEEEEECCCCCccCcccchHHHHHHHhCCCEEEEECCCC
Confidence 3566677789999988777664310 000012457999999998655442222567888899999999999999
Q ss_pred ---CCCCCCCC-CCCCCCCchHHHHHHHHHHHHH--CCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchh
Q 008093 200 ---LGGVSITS-DCFYNAGWTEDAREVIGYLHHE--YPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL 273 (578)
Q Consensus 200 ---~G~S~~~~-~~~~~~~~~~Dl~~~i~~l~~~--~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~ 273 (578)
+|.+.... ...+.....+|+.++++++.++ .+..+++++||||||.+++.++.. ++ +++++|++++..+..
T Consensus 464 ~~~~G~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~~~~-~~--~~~~~v~~~~~~~~~ 540 (662)
T 3azo_A 464 STGYGRAYRERLRGRWGVVDVEDCAAVATALAEEGTADRARLAVRGGSAGGWTAASSLVS-TD--VYACGTVLYPVLDLL 540 (662)
T ss_dssp CSSSCHHHHHTTTTTTTTHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHH-CC--CCSEEEEESCCCCHH
T ss_pred CCCccHHHHHhhccccccccHHHHHHHHHHHHHcCCcChhhEEEEEECHHHHHHHHHHhC-cC--ceEEEEecCCccCHH
Confidence 66542211 1111123358999999999887 355689999999999999998875 66 899999998877653
Q ss_pred hhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccC
Q 008093 274 IGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVG 353 (578)
Q Consensus 274 ~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~ 353 (578)
..... ....+. . .+...+ ........+.|...++...+.
T Consensus 541 ~~~~~------------------------~~~~~~-----------~---~~~~~~---~~~~~~~~~~~~~~sp~~~~~ 579 (662)
T 3azo_A 541 GWADG------------------------GTHDFE-----------S---RYLDFL---IGSFEEFPERYRDRAPLTRAD 579 (662)
T ss_dssp HHHTT------------------------CSCGGG-----------T---THHHHH---TCCTTTCHHHHHHTCGGGGGG
T ss_pred HHhcc------------------------cccchh-----------h---HhHHHH---hCCCccchhHHHhhChHhHhc
Confidence 21000 000000 0 000000 000112234455567778889
Q ss_pred CCccceEEEEeCCCCCCCCCCcchH---HHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcCC
Q 008093 354 NVSIPLLCISSLDDPVCTVEAIPWD---ECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSS 424 (578)
Q Consensus 354 ~I~vPvLiI~g~dDpivp~~~~~~~---~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~~ 424 (578)
++++|+|+++|++|+++|.+..... +.....++++.+++++||..... .....+.+.+.+||.+.+..
T Consensus 580 ~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~---~~~~~~~~~~~~fl~~~l~~ 650 (662)
T 3azo_A 580 RVRVPFLLLQGLEDPVCPPEQCDRFLEAVAGCGVPHAYLSFEGEGHGFRRK---ETMVRALEAELSLYAQVFGV 650 (662)
T ss_dssp GCCSCEEEEEETTCSSSCTHHHHHHHHHHTTSCCCEEEEEETTCCSSCCSH---HHHHHHHHHHHHHHHHHTTC
T ss_pred cCCCCEEEEeeCCCCCCCHHHHHHHHHHHHHcCCCEEEEEECCCCCCCCCh---HHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999998743322 22233467999999999975332 12235778999999987643
|
| >1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=3.9e-18 Score=176.33 Aligned_cols=183 Identities=10% Similarity=0.035 Sum_probs=125.6
Q ss_pred CCcEEEEECCCCCCCccHHHH------HHHHHHHhCCceEEEEeCCCCCCCCCCCCCCC----------------C----
Q 008093 159 TTPIAIVIPGLTSDSAASYIR------HLVFNTAKRGWNVVVSNHRGLGGVSITSDCFY----------------N---- 212 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~------~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~----------------~---- 212 (578)
.+++||++||++ .+...|.. .++..|.++||+|+++|+||||.|........ .
T Consensus 61 ~~~~vvl~HG~g-~~~~~~~~~pdg~~~~~~~l~~~G~~V~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (328)
T 1qlw_A 61 KRYPITLIHGCC-LTGMTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKLGKAPASSLPDLFAAGHE 139 (328)
T ss_dssp CSSCEEEECCTT-CCGGGGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHHHHTTSSCGGGSCCCBCCCHH
T ss_pred CCccEEEEeCCC-CCCCccccCCCCchHHHHHHHHCCCeEEEECCCCcccCCCCCcccccccccccCcccccceeccchh
Confidence 457799999995 45555622 48889999999999999999999975432100 0
Q ss_pred -------CC--c-------------hHH------------------HHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHh
Q 008093 213 -------AG--W-------------TED------------------AREVIGYLHHEYPKAPLFAIGTSIGANILVKYLG 252 (578)
Q Consensus 213 -------~~--~-------------~~D------------------l~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~ 252 (578)
.+ | .++ +.+.+..+.++.+ +++++||||||.+++.++.
T Consensus 140 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~--~~~lvGhS~GG~~a~~~a~ 217 (328)
T 1qlw_A 140 AAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIKLD--GTVLLSHSQSGIYPFQTAA 217 (328)
T ss_dssp HHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHHHT--SEEEEEEGGGTTHHHHHHH
T ss_pred hhhhHhhhcccCCccCcCccCCHHHHHHHHHHhCccccccCCChhHHHHHHHHHHHHhC--CceEEEECcccHHHHHHHH
Confidence 00 0 111 3333334433332 8999999999999999999
Q ss_pred hcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhc
Q 008093 253 EEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCL 332 (578)
Q Consensus 253 ~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~ 332 (578)
.+|+ +|+++|++++... .
T Consensus 218 ~~p~--~v~~~v~~~p~~~---------------------------------------~--------------------- 235 (328)
T 1qlw_A 218 MNPK--GITAIVSVEPGEC---------------------------------------P--------------------- 235 (328)
T ss_dssp HCCT--TEEEEEEESCSCC---------------------------------------C---------------------
T ss_pred hChh--heeEEEEeCCCCC---------------------------------------C---------------------
Confidence 9988 8999999976430 0
Q ss_pred cCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCC-----CCcchH---HHhcCCCEEEEEeCCCC-----cccc
Q 008093 333 VGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTV-----EAIPWD---ECRANKNVVLATTWHGG-----HLAF 399 (578)
Q Consensus 333 ~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~-----~~~~~~---~~~~~~~~~l~~~~~GG-----H~~~ 399 (578)
........+++|+|+++|++|+++|. +..... ......++++.+++++| |+.+
T Consensus 236 --------------~~~~~~~~~~~PvLii~G~~D~~~p~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~gi~G~~H~~~ 301 (328)
T 1qlw_A 236 --------------KPEDVKPLTSIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAAGGKGQLMSLPALGVHGNSHMMM 301 (328)
T ss_dssp --------------CGGGCGGGTTSCEEEEECSSCTTCTTTHHHHHHHHHHHHHHHHTTCCEEEEEGGGGTCCCCCTTGG
T ss_pred --------------CHHHHhhccCCCEEEEeccCCccccchhhHHHHHHHHHHHHHHhCCCceEEEcCCCCcCCCcccch
Confidence 00011123578999999999999996 432221 22233589999999666 9998
Q ss_pred ccccccCcccHHHHHHHHHHhhcC
Q 008093 400 FEGLTAAGMWWVRAVNEYLGVLHS 423 (578)
Q Consensus 400 ~eg~~~~~~w~~~~v~eFL~~~~~ 423 (578)
.+. +...+.+.+.+||++...
T Consensus 302 ~~~---~~~~~~~~i~~fl~~~~~ 322 (328)
T 1qlw_A 302 QDR---NNLQVADLILDWIGRNTA 322 (328)
T ss_dssp GST---THHHHHHHHHHHHHHTCC
T ss_pred hcc---CHHHHHHHHHHHHHhccc
Confidence 882 234688999999987643
|
| >3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=4.4e-17 Score=173.83 Aligned_cols=117 Identities=13% Similarity=0.055 Sum_probs=83.0
Q ss_pred cCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHh------CCceEEEEeCCCCC
Q 008093 128 SDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAK------RGWNVVVSNHRGLG 201 (578)
Q Consensus 128 ~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~------~Gy~Vvv~D~RG~G 201 (578)
-||..|.+....++ .++.++||++||++|+... | ..++..|.+ .||+|+++|+||||
T Consensus 92 i~g~~i~~~~~~~~---------------~~~~~pllllHG~~~s~~~-~-~~~~~~L~~~~~~~~~gf~vv~~DlpG~G 154 (408)
T 3g02_A 92 IEGLTIHFAALFSE---------------REDAVPIALLHGWPGSFVE-F-YPILQLFREEYTPETLPFHLVVPSLPGYT 154 (408)
T ss_dssp ETTEEEEEEEECCS---------------CTTCEEEEEECCSSCCGGG-G-HHHHHHHHHHCCTTTCCEEEEEECCTTST
T ss_pred ECCEEEEEEEecCC---------------CCCCCeEEEECCCCCcHHH-H-HHHHHHHhcccccccCceEEEEECCCCCC
Confidence 38988887655432 2456779999999765444 5 577788876 58999999999999
Q ss_pred CCCCCC-CCCCCCCchHHHHHHHHHHHHHCCCC-cEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEc
Q 008093 202 GVSITS-DCFYNAGWTEDAREVIGYLHHEYPKA-PLFAIGTSIGANILVKYLGEEGEKTPVAGAAAIC 267 (578)
Q Consensus 202 ~S~~~~-~~~~~~~~~~Dl~~~i~~l~~~~~~~-~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis 267 (578)
.|+... ...++ .+++.+.+..+.+..+.. +++++||||||.+++.+|.++++ +.++++..
T Consensus 155 ~S~~~~~~~~~~---~~~~a~~~~~l~~~lg~~~~~~lvG~S~Gg~ia~~~A~~~p~---~~~~~l~~ 216 (408)
T 3g02_A 155 FSSGPPLDKDFG---LMDNARVVDQLMKDLGFGSGYIIQGGDIGSFVGRLLGVGFDA---CKAVHLNF 216 (408)
T ss_dssp TSCCSCSSSCCC---HHHHHHHHHHHHHHTTCTTCEEEEECTHHHHHHHHHHHHCTT---EEEEEESC
T ss_pred CCCCCCCCCCCC---HHHHHHHHHHHHHHhCCCCCEEEeCCCchHHHHHHHHHhCCC---ceEEEEeC
Confidence 998654 22222 244444444444445555 89999999999999999999955 55555544
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.75 E-value=3.1e-18 Score=184.83 Aligned_cols=226 Identities=14% Similarity=0.013 Sum_probs=136.0
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCC--CCcE
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYP--KAPL 235 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~--~~~i 235 (578)
...|+||++||.+++... + .+..|+++||+|+++|+||+|+++.... ....+|+.++++++..... ..++
T Consensus 172 ~~~P~Vv~lhG~~~~~~~-~---~a~~La~~Gy~Vla~D~rG~~~~~~~~~----~~~~~d~~~a~~~l~~~~~vd~~~i 243 (446)
T 3hlk_A 172 GPFPGIVDMFGTGGGLLE-Y---RASLLAGKGFAVMALAYYNYEDLPKTME----TLHLEYFEEAMNYLLSHPEVKGPGV 243 (446)
T ss_dssp CCBCEEEEECCSSCSCCC-H---HHHHHHTTTCEEEEECCSSSTTSCSCCS----EEEHHHHHHHHHHHHTSTTBCCSSE
T ss_pred CCCCEEEEECCCCcchhh-H---HHHHHHhCCCEEEEeccCCCCCCCcchh----hCCHHHHHHHHHHHHhCCCCCCCCE
Confidence 456899999999664443 3 3778889999999999999998754321 1236899999999987643 3689
Q ss_pred EEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHH
Q 008093 236 FAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEG 315 (578)
Q Consensus 236 ~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~ 315 (578)
+++||||||.+++.++..+++ ++++|+++++............ ...+.+. .+...
T Consensus 244 ~l~G~S~GG~lAl~~A~~~p~---v~a~V~~~~~~~~~~~~~~~~~--------------------~~~~~~~--~~~~~ 298 (446)
T 3hlk_A 244 GLLGISKGGELCLSMASFLKG---ITAAVVINGSVANVGGTLRYKG--------------------ETLPPVG--VNRNR 298 (446)
T ss_dssp EEEEETHHHHHHHHHHHHCSC---EEEEEEESCCSBCCSSEEEETT--------------------EEECCCC--BCGGG
T ss_pred EEEEECHHHHHHHHHHHhCCC---ceEEEEEcCcccccCCCccccC--------------------ccCCccc--cchhc
Confidence 999999999999999999886 9999999876533211000000 0000000 00000
Q ss_pred Hhc-cCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCc----chHHHhcC-CCEEEE
Q 008093 316 IKK-SRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAI----PWDECRAN-KNVVLA 389 (578)
Q Consensus 316 i~~-~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~----~~~~~~~~-~~~~l~ 389 (578)
... ......+... +...... ........+.++++|+|+++|++|+++|.+.. ........ +++++.
T Consensus 299 ~~~~~~~~~~~~~~-------~~~~~~~-~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~~l~~~g~~~~~l~ 370 (446)
T 3hlk_A 299 IKVTKDGYADIVDV-------LNSPLEG-PDQKSFIPVERAESTFLFLVGQDDHNWKSEFYANEACKRLQAHGRRKPQII 370 (446)
T ss_dssp CEECSSSCEECTTC-------BCCTTSG-GGGGGBCCGGGCCSEEEEEEETTCCSSCHHHHHHHHHHHHHHTTCCCCEEE
T ss_pred cccccchHHHHHHH-------Hhchhhc-cccccccCHHHCCCCEEEEEeCCCCCcChHHHHHHHHHHHHHcCCCCcEEE
Confidence 000 0000000000 0000000 00112234678899999999999999998422 11222333 348999
Q ss_pred EeCCCCccccccc-------------------cc-----cCcccHHHHHHHHHHhhcCC
Q 008093 390 TTWHGGHLAFFEG-------------------LT-----AAGMWWVRAVNEYLGVLHSS 424 (578)
Q Consensus 390 ~~~~GGH~~~~eg-------------------~~-----~~~~w~~~~v~eFL~~~~~~ 424 (578)
+++++||...... .. .......+.+.+||++.+..
T Consensus 371 ~~pgagH~~~~p~~P~~~~~~~~~~~~~~~~gG~~~~~~~a~~~~~~~i~~Fl~~~L~~ 429 (446)
T 3hlk_A 371 CYPETGHYIEPPYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQTFFHKHLGG 429 (446)
T ss_dssp EETTBCSCCCSTTCCCCCBC-------CBBCCBCHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred EECCCCCeECCCCCCCChhhcccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 9999999863110 00 00123568899999987654
|
| >2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=3.3e-17 Score=170.50 Aligned_cols=260 Identities=12% Similarity=0.007 Sum_probs=148.5
Q ss_pred EEEEecCCcEEEEEEecCCCCCC----CccccccccCCCCCCcEEEEECCCC---CCCccHHHHHHHHHHH-hCCceEEE
Q 008093 123 QLFRLSDGGMIALDWLMGSTGPG----DVFHANNFISKDDTTPIAIVIPGLT---SDSAASYIRHLVFNTA-KRGWNVVV 194 (578)
Q Consensus 123 ~~l~~~DG~~i~ldw~~~~~~~~----~~~~~~~~~~~~~~~PiVVllHGl~---G~s~~~yi~~l~~~l~-~~Gy~Vvv 194 (578)
+.+...++..+.++++.|..... ..+..+. ...+...|+||++||.+ |+........++..|+ +.||.|++
T Consensus 73 ~dv~~~~~~~l~~~~~~P~~~~~~~~~~~~~~~~-~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~g~~vv~ 151 (351)
T 2zsh_A 73 FDVLIDRRINLLSRVYRPAYADQEQPPSILDLEK-PVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVS 151 (351)
T ss_dssp EEEEEETTTTEEEEEEEECCTTCSSCCCTTSTTC-CCCSSSCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTSEEEE
T ss_pred EEEEecCCCCeEEEEEecCCcccccccccccccc-ccCCCCceEEEEECCCcCcCCCCcchhHHHHHHHHHHHcCCEEEE
Confidence 34445556667777777644200 0000000 00124679999999942 2223322367888888 78999999
Q ss_pred EeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH------CCCC-cEEEEEEchHHHHHHHHHhhcCCC-CCccEEEEE
Q 008093 195 SNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHE------YPKA-PLFAIGTSIGANILVKYLGEEGEK-TPVAGAAAI 266 (578)
Q Consensus 195 ~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~------~~~~-~i~lvGhSmGG~ial~ya~~~p~~-~~V~~~Vli 266 (578)
+|+||++.+... ...+|+.++++++.+. .+.. +++++||||||++++.++.+.++. .+++++|++
T Consensus 152 ~d~rg~~~~~~~-------~~~~D~~~~~~~l~~~~~~~~~~d~~~~i~l~G~S~GG~la~~~a~~~~~~~~~v~~~vl~ 224 (351)
T 2zsh_A 152 VNYRRAPENPYP-------CAYDDGWIALNWVNSRSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGESGIDVLGNILL 224 (351)
T ss_dssp ECCCCTTTSCTT-------HHHHHHHHHHHHHHTCGGGCCTTTSSCEEEEEEETHHHHHHHHHHHHHHTTTCCCCEEEEE
T ss_pred ecCCCCCCCCCc-------hhHHHHHHHHHHHHhCchhhcCCCCCCcEEEEEeCcCHHHHHHHHHHhhccCCCeeEEEEE
Confidence 999998765321 3468999999999864 2345 899999999999999999887642 269999999
Q ss_pred cCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhC
Q 008093 267 CSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNC 346 (578)
Q Consensus 267 s~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~ 346 (578)
++.++...............+.... .+..+.....+. ..+ .+.....+. .
T Consensus 225 ~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~~------------~~~~~~~~~------------~ 274 (351)
T 2zsh_A 225 NPMFGGNERTESEKSLDGKYFVTVR---DRDWYWKAFLPE---GED------------REHPACNPF------------S 274 (351)
T ss_dssp SCCCCCSSCCHHHHHHTTTSSCCHH---HHHHHHHHHSCT---TCC------------TTSTTTCTT------------S
T ss_pred CCccCCCcCChhhhhcCCCcccCHH---HHHHHHHHhCCC---CCC------------CCCcccCCC------------C
Confidence 8876643221110000000000000 000000000000 000 000000000 0
Q ss_pred CcccccCCCcc-ceEEEEeCCCCCCCCC-CcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHh
Q 008093 347 SSSTYVGNVSI-PLLCISSLDDPVCTVE-AIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 347 s~~~~l~~I~v-PvLiI~g~dDpivp~~-~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
.....+.++++ |+|+++|++|++++.. .+.........++++.+++++||..+..........+.+.+.+||++
T Consensus 275 ~~~~~l~~i~~pP~Lii~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~g~gH~~~~~~~~~~~~~~~~~i~~Fl~~ 350 (351)
T 2zsh_A 275 PRGKSLEGVSFPKSLVVVAGLDLIRDWQLAYAEGLKKAGQEVKLMHLEKATVGFYLLPNNNHFHNVMDEISAFVNA 350 (351)
T ss_dssp TTSCCCTTCCCCEEEEEEETTSTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTTTSSSCSHHHHHHHHHHHHHHHC
T ss_pred CCccchhhCCCCCEEEEEcCCCcchHHHHHHHHHHHHcCCCEEEEEECCCcEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 11245667777 9999999999998732 12222334556899999999999877621001223578889999864
|
| >2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.75 E-value=1e-17 Score=164.74 Aligned_cols=177 Identities=18% Similarity=0.191 Sum_probs=126.4
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEE--eCCCCCCCCCCCCCC---CC-CC---chHHHHHHHHHHHH
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVS--NHRGLGGVSITSDCF---YN-AG---WTEDAREVIGYLHH 228 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~--D~RG~G~S~~~~~~~---~~-~~---~~~Dl~~~i~~l~~ 228 (578)
...|+||++||+++ +...| ..++..+++ +|+|+++ |+||+|++....... +. .. ..+|+.++++++.+
T Consensus 60 ~~~p~vv~~HG~~~-~~~~~-~~~~~~l~~-~~~v~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 136 (251)
T 2r8b_A 60 AGAPLFVLLHGTGG-DENQF-FDFGARLLP-QATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGKMADFIKANRE 136 (251)
T ss_dssp TTSCEEEEECCTTC-CHHHH-HHHHHHHST-TSEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCCC-CHhHH-HHHHHhcCC-CceEEEecCCcCCCCCcccccCCCCCcCCHHHHHHHHHHHHHHHHHHHh
Confidence 46789999999954 45445 678888876 5999999 899999875432111 11 11 24677777777777
Q ss_pred HCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhccccc
Q 008093 229 EYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYS 308 (578)
Q Consensus 229 ~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~ 308 (578)
+++..+++++||||||.+++.++..+++ +++++|++++..+...
T Consensus 137 ~~~~~~i~l~G~S~Gg~~a~~~a~~~p~--~v~~~v~~~~~~~~~~---------------------------------- 180 (251)
T 2r8b_A 137 HYQAGPVIGLGFSNGANILANVLIEQPE--LFDAAVLMHPLIPFEP---------------------------------- 180 (251)
T ss_dssp HHTCCSEEEEEETHHHHHHHHHHHHSTT--TCSEEEEESCCCCSCC----------------------------------
T ss_pred ccCCCcEEEEEECHHHHHHHHHHHhCCc--ccCeEEEEecCCCccc----------------------------------
Confidence 6677899999999999999999999988 8999999987654310
Q ss_pred ccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHh-c--CCC
Q 008093 309 RLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECR-A--NKN 385 (578)
Q Consensus 309 ~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~-~--~~~ 385 (578)
......+++|+|+++|++|+++|.+........ . ...
T Consensus 181 ----------------------------------------~~~~~~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~~~~~ 220 (251)
T 2r8b_A 181 ----------------------------------------KISPAKPTRRVLITAGERDPICPVQLTKALEESLKAQGGT 220 (251)
T ss_dssp ----------------------------------------CCCCCCTTCEEEEEEETTCTTSCHHHHHHHHHHHHHHSSE
T ss_pred ----------------------------------------cccccccCCcEEEeccCCCccCCHHHHHHHHHHHHHcCCe
Confidence 011234689999999999999997644332211 1 333
Q ss_pred EEEEEeCCCCccccccccccCcccHHHHHHHHHHhhc
Q 008093 386 VVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 386 ~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~ 422 (578)
+.+ .++++||..+.+ ..+.+.+||++..
T Consensus 221 ~~~-~~~~~gH~~~~~--------~~~~~~~~l~~~l 248 (251)
T 2r8b_A 221 VET-VWHPGGHEIRSG--------EIDAVRGFLAAYG 248 (251)
T ss_dssp EEE-EEESSCSSCCHH--------HHHHHHHHHGGGC
T ss_pred EEE-EecCCCCccCHH--------HHHHHHHHHHHhc
Confidence 444 677889987555 3477888988754
|
| >1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32 | Back alignment and structure |
|---|
Probab=99.75 E-value=1.9e-17 Score=165.27 Aligned_cols=206 Identities=15% Similarity=0.024 Sum_probs=133.5
Q ss_pred CCCcEEEEECCCC--C--CCccHHHHHHHHHH----HhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH
Q 008093 158 DTTPIAIVIPGLT--S--DSAASYIRHLVFNT----AKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHE 229 (578)
Q Consensus 158 ~~~PiVVllHGl~--G--~s~~~yi~~l~~~l----~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~ 229 (578)
...|+||++||.+ . ++...| ..++..| .+.||+|+++|+||.+.... ....+|+.++++++.++
T Consensus 39 ~~~p~vv~lHGgg~~~g~~~~~~~-~~~~~~L~~~a~~~g~~vi~~d~r~~~~~~~-------~~~~~d~~~~~~~l~~~ 110 (273)
T 1vkh_A 39 NTREAVIYIHGGAWNDPENTPNDF-NQLANTIKSMDTESTVCQYSIEYRLSPEITN-------PRNLYDAVSNITRLVKE 110 (273)
T ss_dssp TCCEEEEEECCSTTTCTTCCGGGG-HHHHHHHHHHCTTCCEEEEEECCCCTTTSCT-------THHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCcccCCcCChHHH-HHHHHHHhhhhccCCcEEEEeecccCCCCCC-------CcHHHHHHHHHHHHHHh
Confidence 5678999999943 2 233445 6788887 67899999999998775421 13468999999999888
Q ss_pred CCCCcEEEEEEchHHHHHHHHHhhc-----------------CCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHH
Q 008093 230 YPKAPLFAIGTSIGANILVKYLGEE-----------------GEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRAL 292 (578)
Q Consensus 230 ~~~~~i~lvGhSmGG~ial~ya~~~-----------------p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l 292 (578)
++..+++++||||||.+++.++... ++ +++++|++++.++......... .+...+
T Consensus 111 ~~~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~--~v~~~v~~~~~~~~~~~~~~~~------~~~~~~ 182 (273)
T 1vkh_A 111 KGLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQ--IVKRVFLLDGIYSLKELLIEYP------EYDCFT 182 (273)
T ss_dssp HTCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHT--TEEEEEEESCCCCHHHHHHHCG------GGHHHH
T ss_pred CCcCcEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCc--ccceeeeecccccHHHhhhhcc------cHHHHH
Confidence 7778999999999999999999885 44 7999999998876542211000 000000
Q ss_pred HHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCC
Q 008093 293 TIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTV 372 (578)
Q Consensus 293 ~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~ 372 (578)
. .........+ ....... ..+.. ..+.++++|+|+++|++|+++|.
T Consensus 183 ~----~~~~~~~~~~-----------~~~~~~~--------------~~~~~-----~~~~~~~~P~lii~G~~D~~vp~ 228 (273)
T 1vkh_A 183 R----LAFPDGIQMY-----------EEEPSRV--------------MPYVK-----KALSRFSIDMHLVHSYSDELLTL 228 (273)
T ss_dssp H----HHCTTCGGGC-----------CCCHHHH--------------HHHHH-----HHHHHHTCEEEEEEETTCSSCCT
T ss_pred H----HHhcccccch-----------hhccccc--------------Chhhh-----hcccccCCCEEEEecCCcCCCCh
Confidence 0 0000000000 0000000 01110 01223689999999999999987
Q ss_pred CCcch---HHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHH
Q 008093 373 EAIPW---DECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYL 418 (578)
Q Consensus 373 ~~~~~---~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL 418 (578)
+.... .......++++.+++++||..+++. ..+.+.+.+||
T Consensus 229 ~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~-----~~~~~~i~~fl 272 (273)
T 1vkh_A 229 RQTNCLISCLQDYQLSFKLYLDDLGLHNDVYKN-----GKVAKYIFDNI 272 (273)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECCCSGGGGGGC-----HHHHHHHHHTC
T ss_pred HHHHHHHHHHHhcCCceEEEEeCCCcccccccC-----hHHHHHHHHHc
Confidence 74332 2233456799999999999988872 24667777765
|
| >1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=2.1e-18 Score=164.99 Aligned_cols=179 Identities=13% Similarity=0.086 Sum_probs=122.8
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHh--CCceEEEEeCC-------------------CCCCCCCCCCCCCCCCch
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAK--RGWNVVVSNHR-------------------GLGGVSITSDCFYNAGWT 216 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~--~Gy~Vvv~D~R-------------------G~G~S~~~~~~~~~~~~~ 216 (578)
..+|+||++||++++.. .| ..++..+.+ .||+|+++|+| |+|.+.... ........
T Consensus 12 ~~~~~vv~~HG~~~~~~-~~-~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~~-~~~~~~~~ 88 (218)
T 1auo_A 12 PADACVIWLHGLGADRY-DF-MPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSIS-LEELEVSA 88 (218)
T ss_dssp CCSEEEEEECCTTCCTT-TT-HHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEEC-HHHHHHHH
T ss_pred CCCcEEEEEecCCCChh-hH-HHHHHHHhhcCCceEEEeCCCCCccccCCCCCcccceecCcCCCcccccc-hHHHHHHH
Confidence 56799999999965444 45 678888988 89999998765 444321110 00011234
Q ss_pred HHHHHHHHHHHHH-CCCCcEEEEEEchHHHHHHHHHh-hcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHH
Q 008093 217 EDAREVIGYLHHE-YPKAPLFAIGTSIGANILVKYLG-EEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTI 294 (578)
Q Consensus 217 ~Dl~~~i~~l~~~-~~~~~i~lvGhSmGG~ial~ya~-~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~ 294 (578)
+|+.++++++.+. .+..+++++||||||.+++.++. ++++ +++++|++++..+..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~--~~~~~v~~~~~~~~~--------------------- 145 (218)
T 1auo_A 89 KMVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQG--PLGGVIALSTYAPTF--------------------- 145 (218)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCS--CCCEEEEESCCCTTC---------------------
T ss_pred HHHHHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCCC--CccEEEEECCCCCCc---------------------
Confidence 6777777777552 23458999999999999999999 8887 899999998765330
Q ss_pred hHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCC
Q 008093 295 GLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEA 374 (578)
Q Consensus 295 ~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~ 374 (578)
.+.. .+ ...++++|+|+++|++|+++|.+.
T Consensus 146 -----------~~~~-------------------------~~--------------~~~~~~~P~l~i~G~~D~~~~~~~ 175 (218)
T 1auo_A 146 -----------GDEL-------------------------EL--------------SASQQRIPALCLHGQYDDVVQNAM 175 (218)
T ss_dssp -----------CTTC-------------------------CC--------------CHHHHTCCEEEEEETTCSSSCHHH
T ss_pred -----------hhhh-------------------------hh--------------hhcccCCCEEEEEeCCCceecHHH
Confidence 0000 00 013457899999999999999774
Q ss_pred cchHH---HhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 375 IPWDE---CRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 375 ~~~~~---~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
..... .....++++.+++ +||..+.+ ..+.+.+||.+.
T Consensus 176 ~~~~~~~l~~~g~~~~~~~~~-~gH~~~~~--------~~~~~~~~l~~~ 216 (218)
T 1auo_A 176 GRSAFEHLKSRGVTVTWQEYP-MGHEVLPQ--------EIHDIGAWLAAR 216 (218)
T ss_dssp HHHHHHHHHTTTCCEEEEEES-CSSSCCHH--------HHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCceEEEEec-CCCccCHH--------HHHHHHHHHHHH
Confidence 43322 2223369999999 99987665 346778887764
|
| >3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A | Back alignment and structure |
|---|
Probab=99.75 E-value=1.9e-17 Score=170.49 Aligned_cols=224 Identities=13% Similarity=-0.001 Sum_probs=134.9
Q ss_pred CCcE-EEEECCCC--CCCccHHHHHHHHHHHh-CCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH-CCCC
Q 008093 159 TTPI-AIVIPGLT--SDSAASYIRHLVFNTAK-RGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHE-YPKA 233 (578)
Q Consensus 159 ~~Pi-VVllHGl~--G~s~~~yi~~l~~~l~~-~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~-~~~~ 233 (578)
..|+ ||++||.+ .++...| ..++..+++ .||+|+++|+||++..+.. ...+|+.++++++.+. .+..
T Consensus 78 ~~~~~vv~~HGgg~~~g~~~~~-~~~~~~la~~~g~~v~~~dyr~~~~~~~~-------~~~~d~~~a~~~l~~~~~~~~ 149 (322)
T 3k6k_A 78 AGAAHILYFHGGGYISGSPSTH-LVLTTQLAKQSSATLWSLDYRLAPENPFP-------AAVDDCVAAYRALLKTAGSAD 149 (322)
T ss_dssp CCSCEEEEECCSTTTSCCHHHH-HHHHHHHHHHHTCEEEEECCCCTTTSCTT-------HHHHHHHHHHHHHHHHHSSGG
T ss_pred CCCeEEEEEcCCcccCCChHHH-HHHHHHHHHhcCCEEEEeeCCCCCCCCCc-------hHHHHHHHHHHHHHHcCCCCc
Confidence 3455 99999942 2445555 667777775 4999999999998865422 3468999999999887 5667
Q ss_pred cEEEEEEchHHHHHHHHHhhcCCC--CCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccC
Q 008093 234 PLFAIGTSIGANILVKYLGEEGEK--TPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLA 311 (578)
Q Consensus 234 ~i~lvGhSmGG~ial~ya~~~p~~--~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~ 311 (578)
+++++|+||||++++.++...++. ..++++|++++..+............ .... ..
T Consensus 150 ~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~------------------~~~~----~~ 207 (322)
T 3k6k_A 150 RIIIAGDSAGGGLTTASMLKAKEDGLPMPAGLVMLSPFVDLTLSRWSNSNLA------------------DRDF----LA 207 (322)
T ss_dssp GEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCSHHHHHTG------------------GGCS----SS
T ss_pred cEEEEecCccHHHHHHHHHHHHhcCCCCceEEEEecCCcCcccCccchhhcc------------------CCCC----cC
Confidence 999999999999999998876542 24899999998877643221110000 0000 00
Q ss_pred CHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCC-CcchHHHhcCCCEEEEE
Q 008093 312 NWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVE-AIPWDECRANKNVVLAT 390 (578)
Q Consensus 312 d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~-~~~~~~~~~~~~~~l~~ 390 (578)
.... +..+...+..... ... ...++.....+...|+|+++|++|++++.. .+.........++++.+
T Consensus 208 ~~~~------~~~~~~~~~~~~~-~~~-----~~~sp~~~~~~~~pP~li~~G~~D~~~~~~~~~~~~l~~~g~~~~l~~ 275 (322)
T 3k6k_A 208 EPDT------LGEMSELYVGGED-RKN-----PLISPVYADLSGLPEMLIHVGSEEALLSDSTTLAERAGAAGVSVELKI 275 (322)
T ss_dssp CHHH------HHHHHHHHHTTSC-TTC-----TTTCGGGSCCTTCCCEEEEEESSCTTHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CHHH------HHHHHHHhcCCCC-CCC-----CcCCcccccccCCCcEEEEECCcCccHHHHHHHHHHHHHCCCCEEEEE
Confidence 0000 0000000000000 000 001111111223369999999999985422 11223445567899999
Q ss_pred eCCCCccccccc-cccCcccHHHHHHHHHHhhcCC
Q 008093 391 TWHGGHLAFFEG-LTAAGMWWVRAVNEYLGVLHSS 424 (578)
Q Consensus 391 ~~~GGH~~~~eg-~~~~~~w~~~~v~eFL~~~~~~ 424 (578)
++++||...... ..+....+.+.+.+||++....
T Consensus 276 ~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~~ 310 (322)
T 3k6k_A 276 WPDMPHVFQMYGKFVNAADISIKEICHWISARISK 310 (322)
T ss_dssp ETTCCTTGGGGTTTCHHHHHHHHHHHHHHHTTCC-
T ss_pred ECCCccccccccccChHHHHHHHHHHHHHHHHHhc
Confidence 999999765431 1122345778999999886543
|
| >3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A | Back alignment and structure |
|---|
Probab=99.75 E-value=3.5e-17 Score=168.94 Aligned_cols=247 Identities=12% Similarity=-0.023 Sum_probs=149.8
Q ss_pred CCCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECC---CCCCCccHHHHHHHHHHHh-CCceE
Q 008093 117 CFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPG---LTSDSAASYIRHLVFNTAK-RGWNV 192 (578)
Q Consensus 117 ~~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHG---l~G~s~~~yi~~l~~~l~~-~Gy~V 192 (578)
.+..+...+..+|| .+.++++.|.. ....|+||++|| +.| +...| ..++..|++ .||+|
T Consensus 62 ~~~~~~~~i~~~~~-~i~~~iy~P~~--------------~~~~p~vv~~HGGg~~~g-~~~~~-~~~~~~La~~~g~~V 124 (323)
T 3ain_A 62 VGKIEDITIPGSET-NIKARVYYPKT--------------QGPYGVLVYYHGGGFVLG-DIESY-DPLCRAITNSCQCVT 124 (323)
T ss_dssp CSEEEEEEEECSSS-EEEEEEEECSS--------------CSCCCEEEEECCSTTTSC-CTTTT-HHHHHHHHHHHTSEE
T ss_pred ccEEEEEEecCCCC-eEEEEEEecCC--------------CCCCcEEEEECCCccccC-ChHHH-HHHHHHHHHhcCCEE
Confidence 44556666776676 88888887643 245789999999 434 44445 577888875 49999
Q ss_pred EEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC----CCCcEEEEEEchHHHHHHHHHhhcCCCC-CccEEEEEc
Q 008093 193 VVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY----PKAPLFAIGTSIGANILVKYLGEEGEKT-PVAGAAAIC 267 (578)
Q Consensus 193 vv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~----~~~~i~lvGhSmGG~ial~ya~~~p~~~-~V~~~Vlis 267 (578)
+++|+||+|.++.. ...+|+.++++++.+.. +..+++++||||||++++.++...++.. +.+++|+++
T Consensus 125 v~~Dyrg~~~~~~p-------~~~~d~~~~~~~l~~~~~~lgd~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~vl~~ 197 (323)
T 3ain_A 125 ISVDYRLAPENKFP-------AAVVDSFDALKWVYNNSEKFNGKYGIAVGGDSAGGNLAAVTAILSKKENIKLKYQVLIY 197 (323)
T ss_dssp EEECCCCTTTSCTT-------HHHHHHHHHHHHHHHTGGGGTCTTCEEEEEETHHHHHHHHHHHHHHHTTCCCSEEEEES
T ss_pred EEecCCCCCCCCCc-------chHHHHHHHHHHHHHhHHHhCCCceEEEEecCchHHHHHHHHHHhhhcCCCceeEEEEe
Confidence 99999999986432 34588999999987654 4568999999999999999998876521 118899998
Q ss_pred CCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCC
Q 008093 268 SPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCS 347 (578)
Q Consensus 268 ~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s 347 (578)
+..+........... . .... ..... +..+...+..... ...+ ...+
T Consensus 198 p~~~~~~~~~~~~~~----------~---------~~~~----l~~~~------~~~~~~~~~~~~~---~~~~--~~~s 243 (323)
T 3ain_A 198 PAVSFDLITKSLYDN----------G---------EGFF----LTREH------IDWFGQQYLRSFA---DLLD--FRFS 243 (323)
T ss_dssp CCCSCCSCCHHHHHH----------S---------SSSS----SCHHH------HHHHHHHHCSSGG---GGGC--TTTC
T ss_pred ccccCCCCCccHHHh----------c---------cCCC----CCHHH------HHHHHHHhCCCCc---ccCC--cccC
Confidence 876643221110000 0 0000 00000 0000000000000 0000 0001
Q ss_pred cc-cccCCCccceEEEEeCCCCCCCCC-CcchHHHhcCCCEEEEEeCCCCcccccccc-ccCcccHHHHHHHHHHhhc
Q 008093 348 SS-TYVGNVSIPLLCISSLDDPVCTVE-AIPWDECRANKNVVLATTWHGGHLAFFEGL-TAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 348 ~~-~~l~~I~vPvLiI~g~dDpivp~~-~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~-~~~~~w~~~~v~eFL~~~~ 422 (578)
+. ..+..+. |+|+++|++|++++.. .+.........++++.+++++||..+.... .+....+.+.+.+||++..
T Consensus 244 p~~~~l~~l~-P~lii~G~~D~l~~~~~~~a~~l~~ag~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l 320 (323)
T 3ain_A 244 PILADLNDLP-PALIITAEHDPLRDQGEAYANKLLQSGVQVTSVGFNNVIHGFVSFFPFIEQGRDAIGLIGYVLRKVF 320 (323)
T ss_dssp GGGSCCTTCC-CEEEEEETTCTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHH
T ss_pred cccCcccCCC-HHHEEECCCCccHHHHHHHHHHHHHcCCCEEEEEECCCccccccccCcCHHHHHHHHHHHHHHHHHh
Confidence 11 1233333 9999999999998421 222233455678999999999998765421 1122357788999998754
|
| >3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=7.5e-18 Score=163.08 Aligned_cols=179 Identities=11% Similarity=0.069 Sum_probs=123.9
Q ss_pred CCCCcEEEEECCCCCCCccHHHHHHHHHHHh--CCceEEEEeCC-------------------CCCCCCCCCCCCCCCCc
Q 008093 157 DDTTPIAIVIPGLTSDSAASYIRHLVFNTAK--RGWNVVVSNHR-------------------GLGGVSITSDCFYNAGW 215 (578)
Q Consensus 157 ~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~--~Gy~Vvv~D~R-------------------G~G~S~~~~~~~~~~~~ 215 (578)
+...|+||++||+++ +...| ..++..+++ .||+|+++|+| |+|.+.... .......
T Consensus 21 ~~~~~~vv~lHG~~~-~~~~~-~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~~-~~~~~~~ 97 (226)
T 3cn9_A 21 PNADACIIWLHGLGA-DRTDF-KPVAEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPARAID-EDQLNAS 97 (226)
T ss_dssp TTCCEEEEEECCTTC-CGGGG-HHHHHHHHHHCTTEEEEECCCCEEECGGGTSCEEECSSCBCCSSSTTCBC-HHHHHHH
T ss_pred CCCCCEEEEEecCCC-ChHHH-HHHHHHHhhcCCCcEEEeecCCCCccccCCCCcccccccccccccccccc-chhHHHH
Confidence 456799999999965 44445 678888887 89999997766 555332111 0001123
Q ss_pred hHHHHHHHHHHHH-HCCCCcEEEEEEchHHHHHHHHHh-hcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHH
Q 008093 216 TEDAREVIGYLHH-EYPKAPLFAIGTSIGANILVKYLG-EEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALT 293 (578)
Q Consensus 216 ~~Dl~~~i~~l~~-~~~~~~i~lvGhSmGG~ial~ya~-~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~ 293 (578)
.+|+.++++.+.+ ..+..+++++||||||.+++.++. .+++ +++++|++++..+....
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~--~~~~~v~~~~~~~~~~~------------------ 157 (226)
T 3cn9_A 98 ADQVIALIDEQRAKGIAAERIILAGFSQGGAVVLHTAFRRYAQ--PLGGVLALSTYAPTFDD------------------ 157 (226)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHTCSS--CCSEEEEESCCCGGGGG------------------
T ss_pred HHHHHHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCcc--CcceEEEecCcCCCchh------------------
Confidence 4566666666654 223468999999999999999999 8888 79999999876533100
Q ss_pred HhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCC
Q 008093 294 IGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVE 373 (578)
Q Consensus 294 ~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~ 373 (578)
+ + + ...++++|+|+++|++|+++|.+
T Consensus 158 -------------~----------------~-----------~--------------~~~~~~~P~lii~G~~D~~~~~~ 183 (226)
T 3cn9_A 158 -------------L----------------A-----------L--------------DERHKRIPVLHLHGSQDDVVDPA 183 (226)
T ss_dssp -------------C----------------C-----------C--------------CTGGGGCCEEEEEETTCSSSCHH
T ss_pred -------------h----------------h-----------h--------------cccccCCCEEEEecCCCCccCHH
Confidence 0 0 0 01456899999999999999976
Q ss_pred CcchH---HHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 374 AIPWD---ECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 374 ~~~~~---~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
..... ......++++.+++ +||..+.+ ..+.+.+||++.
T Consensus 184 ~~~~~~~~l~~~g~~~~~~~~~-~gH~~~~~--------~~~~i~~~l~~~ 225 (226)
T 3cn9_A 184 LGRAAHDALQAQGVEVGWHDYP-MGHEVSLE--------EIHDIGAWLRKR 225 (226)
T ss_dssp HHHHHHHHHHHTTCCEEEEEES-CCSSCCHH--------HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCceeEEEec-CCCCcchh--------hHHHHHHHHHhh
Confidence 43322 22233478999999 99987655 346788888764
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.74 E-value=8.6e-18 Score=179.79 Aligned_cols=226 Identities=14% Similarity=0.014 Sum_probs=137.5
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC--CCCcE
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY--PKAPL 235 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~--~~~~i 235 (578)
...|+||++||.+++... + .+..|+++||+|+++|+||+|+++.... ....+|+.++++++.+.. ...++
T Consensus 156 ~~~P~Vv~~hG~~~~~~~-~---~a~~La~~Gy~V~a~D~rG~g~~~~~~~----~~~~~d~~~~~~~l~~~~~v~~~~i 227 (422)
T 3k2i_A 156 GPFPGIIDIFGIGGGLLE-Y---RASLLAGHGFATLALAYYNFEDLPNNMD----NISLEYFEEAVCYMLQHPQVKGPGI 227 (422)
T ss_dssp CCBCEEEEECCTTCSCCC-H---HHHHHHTTTCEEEEEECSSSTTSCSSCS----CEETHHHHHHHHHHHTSTTBCCSSE
T ss_pred CCcCEEEEEcCCCcchhH-H---HHHHHHhCCCEEEEEccCCCCCCCCCcc----cCCHHHHHHHHHHHHhCcCcCCCCE
Confidence 457899999999664333 3 4778889999999999999998754322 234689999999998764 34699
Q ss_pred EEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHH
Q 008093 236 FAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEG 315 (578)
Q Consensus 236 ~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~ 315 (578)
+++||||||.+++.++..+++ ++++|+++++........... ....+.+. .+...
T Consensus 228 ~l~G~S~GG~lAl~~a~~~p~---v~a~V~~~~~~~~~~~~~~~~--------------------~~~~~~~~--~~~~~ 282 (422)
T 3k2i_A 228 GLLGISLGADICLSMASFLKN---VSATVSINGSGISGNTAINYK--------------------HSSIPPLG--YDLRR 282 (422)
T ss_dssp EEEEETHHHHHHHHHHHHCSS---EEEEEEESCCSBCCSSCEEET--------------------TEEECCCC--BCGGG
T ss_pred EEEEECHHHHHHHHHHhhCcC---ccEEEEEcCcccccCCchhhc--------------------CCcCCCcc--cchhh
Confidence 999999999999999999886 999999987753321100000 00000000 00000
Q ss_pred Hhcc-CCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcc-h---HHHhcC-CCEEEE
Q 008093 316 IKKS-RSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIP-W---DECRAN-KNVVLA 389 (578)
Q Consensus 316 i~~~-~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~-~---~~~~~~-~~~~l~ 389 (578)
.... .....+... +..... .........+.++++|+|+|+|++|+++|.+... . ...... +++++.
T Consensus 283 ~~~~~~~~~~~~~~-------~~~~~~-~~~~~~~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~~l~~~g~~~~~l~ 354 (422)
T 3k2i_A 283 IKVAFSGLVDIVDI-------RNALVG-GYKNPSMIPIEKAQGPILLIVGQDDHNWRSELYAQTVSERLQAHGKEKPQII 354 (422)
T ss_dssp CEECTTSCEECTTC-------BCCCTT-GGGSTTBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHHHHHHHTTCCCCEEE
T ss_pred cccCcchhHHHHHH-------Hhhhhh-cccccccccHHHCCCCEEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCCCEEE
Confidence 0000 000000000 000000 0112233457788999999999999999976332 1 122223 348999
Q ss_pred EeCCCCcccccccc-----------------------c-cCcccHHHHHHHHHHhhcCC
Q 008093 390 TTWHGGHLAFFEGL-----------------------T-AAGMWWVRAVNEYLGVLHSS 424 (578)
Q Consensus 390 ~~~~GGH~~~~eg~-----------------------~-~~~~w~~~~v~eFL~~~~~~ 424 (578)
+++++||....... . .....+.+.+.+||++.+..
T Consensus 355 ~~~gagH~~~~p~~p~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~i~~Fl~~~L~~ 413 (422)
T 3k2i_A 355 CYPGTGHYIEPPYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCKHLGG 413 (422)
T ss_dssp EETTCCSCCCSTTCCCCCEEEETTTTEEEECCCCHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred EECCCCCEECCCCCCcchhhhccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999998632100 0 01123568899999987653
|
| >1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A | Back alignment and structure |
|---|
Probab=99.74 E-value=7.5e-18 Score=173.10 Aligned_cols=253 Identities=14% Similarity=0.016 Sum_probs=150.3
Q ss_pred CCCeeEEEEEecCCc-EEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCC--CCCccHHHHHHHHHHHh-CCceE
Q 008093 117 CFSYRRQLFRLSDGG-MIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLT--SDSAASYIRHLVFNTAK-RGWNV 192 (578)
Q Consensus 117 ~~~y~r~~l~~~DG~-~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~--G~s~~~yi~~l~~~l~~-~Gy~V 192 (578)
.+..+...+...||. .+.++++.|... ....|+||++||.+ .++...| ..++..+++ .||+|
T Consensus 48 ~~~~~~~~i~~~~g~~~l~~~~~~P~~~-------------~~~~p~vv~~HGgg~~~g~~~~~-~~~~~~la~~~G~~V 113 (323)
T 1lzl_A 48 GVSLRELSAPGLDGDPEVKIRFVTPDNT-------------AGPVPVLLWIHGGGFAIGTAESS-DPFCVEVARELGFAV 113 (323)
T ss_dssp TEEEEEEEECCSTTCCCEEEEEEEESSC-------------CSCEEEEEEECCSTTTSCCGGGG-HHHHHHHHHHHCCEE
T ss_pred CceEEEEEecCCCCCceeEEEEEecCCC-------------CCCCcEEEEECCCccccCChhhh-HHHHHHHHHhcCcEE
Confidence 455666677777886 788888876431 24568999999974 1344445 566777776 59999
Q ss_pred EEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH---C--CCCcEEEEEEchHHHHHHHHHhhcCC--CCCccEEEE
Q 008093 193 VVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHE---Y--PKAPLFAIGTSIGANILVKYLGEEGE--KTPVAGAAA 265 (578)
Q Consensus 193 vv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~---~--~~~~i~lvGhSmGG~ial~ya~~~p~--~~~V~~~Vl 265 (578)
+++|+||+|.++.. ...+|+.++++++.+. + +..+++++||||||++++.++...++ ...++++|+
T Consensus 114 v~~d~rg~~~~~~~-------~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl 186 (323)
T 1lzl_A 114 ANVEYRLAPETTFP-------GPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFL 186 (323)
T ss_dssp EEECCCCTTTSCTT-------HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEE
T ss_pred EEecCCCCCCCCCC-------chHHHHHHHHHHHHhhHHHcCCChhheEEEecCchHHHHHHHHHHHhhcCCCCeeEEEE
Confidence 99999999987532 3457888889888763 2 23589999999999999999877543 125899999
Q ss_pred EcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCC---CCHHHH
Q 008093 266 ICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKF---ETVDTY 342 (578)
Q Consensus 266 is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~---~~~~~y 342 (578)
+++..+.......... +. .... ..... ...+...+....... ....
T Consensus 187 ~~p~~~~~~~~~~~~~-----------------~~--~~~~----~~~~~------~~~~~~~~~~~~~~~~~~~~~~-- 235 (323)
T 1lzl_A 187 EIPELDDRLETVSMTN-----------------FV--DTPL----WHRPN------AILSWKYYLGESYSGPEDPDVS-- 235 (323)
T ss_dssp ESCCCCTTCCSHHHHH-----------------CS--SCSS----CCHHH------HHHHHHHHHCTTCCCTTCSCCC--
T ss_pred ECCccCCCcCchhHHH-----------------hc--cCCC----CCHHH------HHHHHHHhCCCCcccccccCCC--
Confidence 9987765432111000 00 0000 00000 000000000000000 0000
Q ss_pred HHhCCccc--ccCCCccceEEEEeCCCCCCCCC-CcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHH
Q 008093 343 YRNCSSST--YVGNVSIPLLCISSLDDPVCTVE-AIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 343 y~~~s~~~--~l~~I~vPvLiI~g~dDpivp~~-~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
...++.. .+.. ..|+|+++|++|++++.. .+.........++++.+++++||.-.+....+....+.+.+.+||+
T Consensus 236 -~~~sp~~~~~~~~-~~P~li~~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~i~~fl~ 313 (323)
T 1lzl_A 236 -IYAAPSRATDLTG-LPPTYLSTMELDPLRDEGIEYALRLLQAGVSVELHSFPGTFHGSALVATAAVSERGAAEALTAIR 313 (323)
T ss_dssp -TTTCGGGCSCCTT-CCCEEEEEETTCTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSTTSHHHHHHHHHHHHHHH
T ss_pred -cccCcccCcccCC-CChhheEECCcCCchHHHHHHHHHHHHcCCCEEEEEeCcCccCcccCccCHHHHHHHHHHHHHHH
Confidence 0001111 1111 269999999999998421 1222234456789999999999974322111112357788999998
Q ss_pred hhcC
Q 008093 420 VLHS 423 (578)
Q Consensus 420 ~~~~ 423 (578)
+...
T Consensus 314 ~~l~ 317 (323)
T 1lzl_A 314 RGLR 317 (323)
T ss_dssp HHTC
T ss_pred HHhc
Confidence 8654
|
| >3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A | Back alignment and structure |
|---|
Probab=99.74 E-value=2.3e-17 Score=184.11 Aligned_cols=282 Identities=11% Similarity=0.014 Sum_probs=165.2
Q ss_pred eEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCcc--HHHHHHH-HHHHhCCceEEEEeC
Q 008093 121 RRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAA--SYIRHLV-FNTAKRGWNVVVSNH 197 (578)
Q Consensus 121 ~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~--~yi~~l~-~~l~~~Gy~Vvv~D~ 197 (578)
+...|++.||..|..+++.|.+ ....|+||++||++..... .| ...+ ..++++||.|+++|+
T Consensus 10 ~~v~i~~~DG~~L~~~~~~P~~--------------~~~~P~vv~~~~~g~~~~~~~~y-~~~~~~~la~~Gy~vv~~D~ 74 (587)
T 3i2k_A 10 SNVMVPMRDGVRLAVDLYRPDA--------------DGPVPVLLVRNPYDKFDVFAWST-QSTNWLEFVRDGYAVVIQDT 74 (587)
T ss_dssp EEEEEECTTSCEEEEEEEEECC--------------SSCEEEEEEEESSCTTCHHHHHT-TTCCTHHHHHTTCEEEEEEC
T ss_pred EEEEEECCCCCEEEEEEEECCC--------------CCCeeEEEEECCcCCCccccccc-hhhHHHHHHHCCCEEEEEcC
Confidence 3456899999999999987643 2356899999998544321 12 1123 788899999999999
Q ss_pred CCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH-CCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCC-cchhhh
Q 008093 198 RGLGGVSITSDCFYNAGWTEDAREVIGYLHHE-YPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSP-WDLLIG 275 (578)
Q Consensus 198 RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~-~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p-~d~~~~ 275 (578)
||+|+|+.....+ ....+|+.++++++.++ ..+.++.++|+||||++++.+|++.++ .++++|+++++ +|....
T Consensus 75 RG~G~S~g~~~~~--~~~~~D~~~~i~~l~~~~~~~~~v~l~G~S~GG~~a~~~a~~~~~--~l~a~v~~~~~~~d~~~~ 150 (587)
T 3i2k_A 75 RGLFASEGEFVPH--VDDEADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVG--GLKAIAPSMASADLYRAP 150 (587)
T ss_dssp TTSTTCCSCCCTT--TTHHHHHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCT--TEEEBCEESCCSCTCCCC
T ss_pred CCCCCCCCccccc--cchhHHHHHHHHHHHhCCCCCCeEEEEeeCHHHHHHHHHHhhCCC--ccEEEEEeCCcccccccc
Confidence 9999998654332 34678999999999765 234689999999999999999999887 79999999998 776532
Q ss_pred hHH----HhhHHHHHHHHHHHHHhHH--HHH------hhhcccccccCCHHHHhccCCHHHHHh-----hhhhcc-CCCC
Q 008093 276 DRF----IGRRLIQKIYDRALTIGLQ--DYA------QLHEPRYSRLANWEGIKKSRSIRDFDS-----HATCLV-GKFE 337 (578)
Q Consensus 276 ~~~----l~~~~~~~~~~~~l~~~l~--~~~------~~~~~~l~~~~d~~~i~~~~s~~efd~-----~~~~~~-~g~~ 337 (578)
... +..... ..+...+..... ... ...........++........+.+++. .+.... ....
T Consensus 151 ~~~~gG~~~~~~~-~~w~~~~~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (587)
T 3i2k_A 151 WYGPGGALSVEAL-LGWSALIGTGLITSRSDARPEDAADFVQLAAILNDVAGAASVTPLAEQPLLGRLIPWVIDQVVDHP 229 (587)
T ss_dssp CSCTTCCCCHHHH-HHHHHHHHHHHHHHSSSCCTTHHHHHHHHHHHHTCHHHHHTCSSTTCCHHHHHHCTHHHHTTTTCC
T ss_pred eeecCCccccchH-HHHHHHhhhhcccccccCCccchhhhhhhhhhhhHHHHHHhcCCcccchhccccchhHHhhhhcCC
Confidence 100 000000 000000000000 000 000000000001111111111111110 000111 2344
Q ss_pred CHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCC-EEEEEeCCCCccccccc-----cccC-cccH
Q 008093 338 TVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKN-VVLATTWHGGHLAFFEG-----LTAA-GMWW 410 (578)
Q Consensus 338 ~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~-~~l~~~~~GGH~~~~eg-----~~~~-~~w~ 410 (578)
..++||+..+....+++|++|+|+++|.+|+.++.. +.......... ..+++-+ ..|..+... ..+. ...+
T Consensus 230 ~~d~yw~~~s~~~~l~~I~vPvL~v~Gw~D~~~~~~-~~~~~~l~~~~~~~L~iGP-w~H~~~~~~~g~~~~g~~~~~~~ 307 (587)
T 3i2k_A 230 DNDESWQSISLFERLGGLATPALITAGWYDGFVGES-LRTFVAVKDNADARLVVGP-WSHSNLTGRNADRKFGIAATYPI 307 (587)
T ss_dssp SCCHHHHTTCCHHHHTTCCCCEEEEEEEECTTHHHH-HHHHHHHTTTSCEEEEEEE-EETTBCSSEETTEECCGGGSCCH
T ss_pred CCChHHhcCChhhhhccCCCCEEEEccCCCccchHH-HHHHHHHhhcCCCEEEECC-ccccCccccCCCcccCCcccccc
Confidence 567899999988999999999999999999886542 32222222222 2455444 356543210 0011 1124
Q ss_pred H---HHHHHHHHhhcCC
Q 008093 411 V---RAVNEYLGVLHSS 424 (578)
Q Consensus 411 ~---~~v~eFL~~~~~~ 424 (578)
. +...+|++..++.
T Consensus 308 ~~~~~~~~~wFD~~Lkg 324 (587)
T 3i2k_A 308 QEATTMHKAFFDRHLRG 324 (587)
T ss_dssp HHHHHHHHHHHHHHHSC
T ss_pred chhhHHHHHHHHHHhcC
Confidence 4 7888999887754
|
| >2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.74 E-value=1.9e-17 Score=159.86 Aligned_cols=176 Identities=18% Similarity=0.162 Sum_probs=124.4
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEE--eCCCCCCCCCCCC---CCCC-CCch---HHHHHHHHHHHH
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVS--NHRGLGGVSITSD---CFYN-AGWT---EDAREVIGYLHH 228 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~--D~RG~G~S~~~~~---~~~~-~~~~---~Dl~~~i~~l~~ 228 (578)
...|+||++||++++.. .| ..++..+.+ ||.|+++ |+||+|.+..... ..+. .... +|+.++++.+..
T Consensus 36 ~~~~~vv~~HG~~~~~~-~~-~~~~~~l~~-g~~v~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 112 (226)
T 2h1i_A 36 TSKPVLLLLHGTGGNEL-DL-LPLAEIVDS-EASVLSVRGNVLENGMPRFFRRLAEGIFDEEDLIFRTKELNEFLDEAAK 112 (226)
T ss_dssp TTSCEEEEECCTTCCTT-TT-HHHHHHHHT-TSCEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEecCCCChh-HH-HHHHHHhcc-CceEEEecCcccCCcchhhccccCccCcChhhHHHHHHHHHHHHHHHHh
Confidence 46789999999965444 45 678888887 9999999 9999998743211 1111 1222 345555666666
Q ss_pred HC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhccc
Q 008093 229 EY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPR 306 (578)
Q Consensus 229 ~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~ 306 (578)
++ +..+++++||||||.+++.++..+++ +++++|+++++.+...
T Consensus 113 ~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~--~~~~~v~~~~~~~~~~-------------------------------- 158 (226)
T 2h1i_A 113 EYKFDRNNIVAIGYSNGANIAASLLFHYEN--ALKGAVLHHPMVPRRG-------------------------------- 158 (226)
T ss_dssp HTTCCTTCEEEEEETHHHHHHHHHHHHCTT--SCSEEEEESCCCSCSS--------------------------------
T ss_pred hcCCCcccEEEEEEChHHHHHHHHHHhChh--hhCEEEEeCCCCCcCc--------------------------------
Confidence 66 55799999999999999999999987 7999999987653210
Q ss_pred ccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchH---HHhcC
Q 008093 307 YSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWD---ECRAN 383 (578)
Q Consensus 307 l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~---~~~~~ 383 (578)
......+++|+++++|++|++++.+..... .....
T Consensus 159 ------------------------------------------~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~ 196 (226)
T 2h1i_A 159 ------------------------------------------MQLANLAGKSVFIAAGTNDPICSSAESEELKVLLENAN 196 (226)
T ss_dssp ------------------------------------------CCCCCCTTCEEEEEEESSCSSSCHHHHHHHHHHHHTTT
T ss_pred ------------------------------------------cccccccCCcEEEEeCCCCCcCCHHHHHHHHHHHHhcC
Confidence 011233589999999999999997643322 11223
Q ss_pred CCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 384 KNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 384 ~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
.++.+ +++++||....+ ..+.+.+||++.
T Consensus 197 ~~~~~-~~~~~gH~~~~~--------~~~~~~~~l~~~ 225 (226)
T 2h1i_A 197 ANVTM-HWENRGHQLTMG--------EVEKAKEWYDKA 225 (226)
T ss_dssp CEEEE-EEESSTTSCCHH--------HHHHHHHHHHHH
T ss_pred CeEEE-EeCCCCCCCCHH--------HHHHHHHHHHHh
Confidence 35666 899999987543 457888888764
|
| >2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A | Back alignment and structure |
|---|
Probab=99.74 E-value=1.5e-17 Score=169.54 Aligned_cols=247 Identities=14% Similarity=0.003 Sum_probs=149.7
Q ss_pred CCCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECC---CCCCCccHHHHHHHHHHHhC-CceE
Q 008093 117 CFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPG---LTSDSAASYIRHLVFNTAKR-GWNV 192 (578)
Q Consensus 117 ~~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHG---l~G~s~~~yi~~l~~~l~~~-Gy~V 192 (578)
.+..++..+...|| .+..+++.|.+. ....|+||++|| +.|+.. .| ..++..++++ ||+|
T Consensus 45 ~~~~~~~~i~~~~g-~l~~~~~~P~~~-------------~~~~p~vv~~HGGg~~~g~~~-~~-~~~~~~la~~~g~~v 108 (310)
T 2hm7_A 45 VAEVREFDMDLPGR-TLKVRMYRPEGV-------------EPPYPALVYYHGGSWVVGDLE-TH-DPVCRVLAKDGRAVV 108 (310)
T ss_dssp CSEEEEEEEEETTE-EEEEEEEECTTC-------------CSSEEEEEEECCSTTTSCCTT-TT-HHHHHHHHHHHTSEE
T ss_pred cceEEEEEeccCCC-eEEEEEEecCCC-------------CCCCCEEEEECCCccccCChh-Hh-HHHHHHHHHhcCCEE
Confidence 45566667777777 898888876431 245789999999 655443 44 5778888775 9999
Q ss_pred EEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC-----CCCcEEEEEEchHHHHHHHHHhhcCCC--CCccEEEE
Q 008093 193 VVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY-----PKAPLFAIGTSIGANILVKYLGEEGEK--TPVAGAAA 265 (578)
Q Consensus 193 vv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~-----~~~~i~lvGhSmGG~ial~ya~~~p~~--~~V~~~Vl 265 (578)
+++|+||+|.+... ...+|+.++++++.+.. +..+++++||||||++++.++...++. ..++++|+
T Consensus 109 ~~~d~rg~~~~~~~-------~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~v~~~vl 181 (310)
T 2hm7_A 109 FSVDYRLAPEHKFP-------AAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLL 181 (310)
T ss_dssp EEECCCCTTTSCTT-------HHHHHHHHHHHHHHHTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCCCEEE
T ss_pred EEeCCCCCCCCCCC-------ccHHHHHHHHHHHHhhHHHhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCceEEEE
Confidence 99999999976432 34689999999998764 235899999999999999998876541 26999999
Q ss_pred EcCCcchh--hhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHH
Q 008093 266 ICSPWDLL--IGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYY 343 (578)
Q Consensus 266 is~p~d~~--~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy 343 (578)
+++..+.. ........ . .... ...... ...+...+.........
T Consensus 182 ~~p~~~~~~~~~~~~~~~-----------------~---~~~~---~~~~~~------~~~~~~~~~~~~~~~~~----- 227 (310)
T 2hm7_A 182 IYPSTGYDPAHPPASIEE-----------------N---AEGY---LLTGGM------MLWFRDQYLNSLEELTH----- 227 (310)
T ss_dssp ESCCCCCCTTSCCHHHHH-----------------T---SSSS---SSCHHH------HHHHHHHHCSSGGGGGC-----
T ss_pred EcCCcCCCcccCCcchhh-----------------c---CCCC---CCCHHH------HHHHHHHhCCCCCccCC-----
Confidence 99877654 11100000 0 0000 000000 00000000000000000
Q ss_pred HhCCcc--cccCCCccceEEEEeCCCCCCCCC-CcchHHHhcCCCEEEEEeCCCCccccc-cccccCcccHHHHHHHHHH
Q 008093 344 RNCSSS--TYVGNVSIPLLCISSLDDPVCTVE-AIPWDECRANKNVVLATTWHGGHLAFF-EGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 344 ~~~s~~--~~l~~I~vPvLiI~g~dDpivp~~-~~~~~~~~~~~~~~l~~~~~GGH~~~~-eg~~~~~~w~~~~v~eFL~ 419 (578)
...++. ..+..+. |+|+++|++|++++.. .+.........++++.+++++||.... ....+....+.+.+.+||+
T Consensus 228 ~~~~p~~~~~l~~~~-P~lii~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~ 306 (310)
T 2hm7_A 228 PWFSPVLYPDLSGLP-PAYIATAQYDPLRDVGKLYAEALNKAGVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLR 306 (310)
T ss_dssp TTTCGGGCSCCTTCC-CEEEEEEEECTTHHHHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHH
T ss_pred ccCCCCcCccccCCC-CEEEEEecCCCchHHHHHHHHHHHHCCCCEEEEEeCCCccchhhhcccChHHHHHHHHHHHHHH
Confidence 000111 1233443 9999999999998321 111223345567999999999995543 2111222357788999987
Q ss_pred hh
Q 008093 420 VL 421 (578)
Q Consensus 420 ~~ 421 (578)
+.
T Consensus 307 ~~ 308 (310)
T 2hm7_A 307 DA 308 (310)
T ss_dssp HH
T ss_pred HH
Confidence 64
|
| >1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.74 E-value=7.4e-18 Score=189.13 Aligned_cols=279 Identities=15% Similarity=0.110 Sum_probs=165.3
Q ss_pred eEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCC-----c-cHHHHHHH---HHHHhCCce
Q 008093 121 RRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDS-----A-ASYIRHLV---FNTAKRGWN 191 (578)
Q Consensus 121 ~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s-----~-~~yi~~l~---~~l~~~Gy~ 191 (578)
+...+++.||..|..+++.|.+ ....|+||++||+++.. . ..|...+. ..|+++||.
T Consensus 26 ~~v~i~~~DG~~L~~~~~~P~~--------------~~~~P~vl~~hgyg~~~~~~~~~~~~~~~~~~~~~~~la~~Gy~ 91 (615)
T 1mpx_A 26 REVMIPMRDGVKLHTVIVLPKG--------------AKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYI 91 (615)
T ss_dssp EEEEEECTTSCEEEEEEEEETT--------------CCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCE
T ss_pred EEEEEECCCCCEEEEEEEeCCC--------------CCCeeEEEEEcCCCCccccccccccccccccchhHHHHHhCCeE
Confidence 4446778899999988887643 13568999999985431 1 12312233 778899999
Q ss_pred EEEEeCCCCCCCCCCCCCC------CCC---CchHHHHHHHHHHHHH--CCCCcEEEEEEchHHHHHHHHHhhcCCCCCc
Q 008093 192 VVVSNHRGLGGVSITSDCF------YNA---GWTEDAREVIGYLHHE--YPKAPLFAIGTSIGANILVKYLGEEGEKTPV 260 (578)
Q Consensus 192 Vvv~D~RG~G~S~~~~~~~------~~~---~~~~Dl~~~i~~l~~~--~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V 260 (578)
|+++|+||+|+|....... +.. ...+|+.++++++.++ +.+.++.++|+||||++++.+|+..++ .+
T Consensus 92 Vv~~D~RG~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~~~rv~l~G~S~GG~~al~~a~~~~~--~l 169 (615)
T 1mpx_A 92 RVFQDVRGKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHP--AL 169 (615)
T ss_dssp EEEEECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCT--TE
T ss_pred EEEECCCCCCCCCCccccccccccccccccccHHHHHHHHHHHHHhcCCCCCCeEEEEecCHHHHHHHHHhhcCCC--ce
Confidence 9999999999997654332 122 5678999999999987 334589999999999999999988777 89
Q ss_pred cEEEEEcCCcchhh-hhH----HHhhHHHHHHHHHHHHHhHHHHHhhhcccccc--cCCHHHHhccCCHHHHHhhh----
Q 008093 261 AGAAAICSPWDLLI-GDR----FIGRRLIQKIYDRALTIGLQDYAQLHEPRYSR--LANWEGIKKSRSIRDFDSHA---- 329 (578)
Q Consensus 261 ~~~Vlis~p~d~~~-~~~----~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~--~~d~~~i~~~~s~~efd~~~---- 329 (578)
+++|+++++.|... ... ..........+. +. ..+.....+.. ...+..........+++..+
T Consensus 170 ~a~v~~~~~~d~~~~~~~~~~G~~~l~~~~~~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 242 (615)
T 1mpx_A 170 KVAVPESPMIDGWMGDDWFNYGAFRQVNFDYFTG--QL-----SKRGKGAGIARQGHDDYSNFLQAGSAGDFAKAAGLEQ 242 (615)
T ss_dssp EEEEEESCCCCTTTTSSSEETTEEBGGGHHHHHH--HH-----SSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGG
T ss_pred EEEEecCCccccccccccccCCeehhhhHHHHHH--hh-----cccCCcccccccchhHHHHHhhcCCccchhhhhcccc
Confidence 99999999888543 100 000000000000 00 00000000000 00011111111112221110
Q ss_pred ---hhccCCCCCHHHHHHhCCcccccCC--CccceEEEEeCCCCCCCCC-CcchH--HHhc-CC--CEEEEEeCCCCccc
Q 008093 330 ---TCLVGKFETVDTYYRNCSSSTYVGN--VSIPLLCISSLDDPVCTVE-AIPWD--ECRA-NK--NVVLATTWHGGHLA 398 (578)
Q Consensus 330 ---~~~~~g~~~~~~yy~~~s~~~~l~~--I~vPvLiI~g~dDpivp~~-~~~~~--~~~~-~~--~~~l~~~~~GGH~~ 398 (578)
..........++||+..++...+++ |++|+|+++|.+|+. +.. ..... +... .+ ...+++.+. +|..
T Consensus 243 ~~~~~~~~~~~~~d~~w~~~Sp~~~~~~~~I~~P~Lii~G~~D~~-~~~~~~~~~~aL~~~g~p~~~~~lvigp~-~H~~ 320 (615)
T 1mpx_A 243 LPWWHKLTEHAAYDAFWQEQALDKVMARTPLKVPTMWLQGLWDQE-DMWGAIHSYAAMEPRDKRNTLNYLVMGPW-RHSQ 320 (615)
T ss_dssp SHHHHHHHHTCSSCHHHHTTCHHHHHHTSCCCSCEEEEEETTCSS-CSSHHHHHHHHHGGGCTTSSSEEEEEESC-CTTG
T ss_pred chHHHHHHhCCCcChhhhhcChhhhhhccCCCCCEEEeecccCcc-ccccHHHHHHHHHhhcCCCcCCEEEECCC-CCCC
Confidence 0000011123589999999889999 999999999999997 543 33222 2222 22 367777776 6876
Q ss_pred ccc-c--cc------c-CcccHHHHHHHHHHhhcCC
Q 008093 399 FFE-G--LT------A-AGMWWVRAVNEYLGVLHSS 424 (578)
Q Consensus 399 ~~e-g--~~------~-~~~w~~~~v~eFL~~~~~~ 424 (578)
+.+ + .. + ...+..+.+.+|++..+..
T Consensus 321 ~~~~~~~~~~~~f~~~~~~~~~~~~~~~wfd~~Lkg 356 (615)
T 1mpx_A 321 VNYDGSALGALNFEGDTARQFRHDVLRPFFDQYLVD 356 (615)
T ss_dssp GGSCCSEETTEECSSCHHHHHHHHTHHHHHHHHHST
T ss_pred ccccccccCccccCcccchhhhhhHHHHHHHHHhcC
Confidence 431 0 00 0 1113357788898887654
|
| >1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.74 E-value=2e-17 Score=173.20 Aligned_cols=260 Identities=15% Similarity=0.008 Sum_probs=153.0
Q ss_pred CCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCC---CCCcc-HHHHHHHHHHHhCCceEE
Q 008093 118 FSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLT---SDSAA-SYIRHLVFNTAKRGWNVV 193 (578)
Q Consensus 118 ~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~---G~s~~-~yi~~l~~~l~~~Gy~Vv 193 (578)
+..++..+...||..+.++++.+... ....|+||++||.+ |+... .| ..++..|++.||.|+
T Consensus 80 ~~~~~~~~~~~~g~~l~~~v~~p~~~-------------~~~~p~vv~iHGgg~~~g~~~~~~~-~~~~~~la~~g~~vv 145 (361)
T 1jkm_A 80 VETSTETILGVDGNEITLHVFRPAGV-------------EGVLPGLVYTHGGGMTILTTDNRVH-RRWCTDLAAAGSVVV 145 (361)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEETTC-------------CSCEEEEEEECCSTTTSSCSSSHHH-HHHHHHHHHTTCEEE
T ss_pred ceeeeeeeecCCCCeEEEEEEeCCCC-------------CCCCeEEEEEcCCccccCCCcccch-hHHHHHHHhCCCEEE
Confidence 44566677788888899988876431 12569999999964 43331 45 678888888999999
Q ss_pred EEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH---CCCCcEEEEEEchHHHHHHHHHhh-----cCCCCCccEEEE
Q 008093 194 VSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHE---YPKAPLFAIGTSIGANILVKYLGE-----EGEKTPVAGAAA 265 (578)
Q Consensus 194 v~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~---~~~~~i~lvGhSmGG~ial~ya~~-----~p~~~~V~~~Vl 265 (578)
++|+||+|++.... ......+|+.++++++.+. ++..+++++|||+||.+++.++.. .++ .++++|+
T Consensus 146 ~~d~r~~gg~~~~~---~~~~~~~D~~~~~~~v~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~p~--~i~~~il 220 (361)
T 1jkm_A 146 MVDFRNAWTAEGHH---PFPSGVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLD--AIDGVYA 220 (361)
T ss_dssp EEECCCSEETTEEC---CTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGG--GCSEEEE
T ss_pred EEecCCCCCCCCCC---CCCccHHHHHHHHHHHHhhHHhcCCCeEEEEEECHHHHHHHHHHHHHHhcCCCc--CcceEEE
Confidence 99999998664221 1123457888889888764 233499999999999999999887 454 6999999
Q ss_pred EcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHh
Q 008093 266 ICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRN 345 (578)
Q Consensus 266 is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~ 345 (578)
+++..+........... . ....+... ... ...... ...+...+......... .+...
T Consensus 221 ~~~~~~~~~~~~~~~~~---~-----~~~~~~~~---~~~----~~~~~~------~~~~~~~~~~~~~~~~~--~~~~p 277 (361)
T 1jkm_A 221 SIPYISGGYAWDHERRL---T-----ELPSLVEN---DGY----FIENGG------MALLVRAYDPTGEHAED--PIAWP 277 (361)
T ss_dssp ESCCCCCCTTSCHHHHH---H-----HCTHHHHT---TTS----SSCHHH------HHHHHHHHSSSSTTTTC--TTTCG
T ss_pred ECCcccccccccccccc---c-----cCcchhhc---cCc----ccCHHH------HHHHHHHhCCCCCCCCC--cccCc
Confidence 99887652110000000 0 00000000 000 000000 00011111000000000 00000
Q ss_pred -CCcccccCCCccceEEEEeCCCCCCCCCC--cchHHHhcCCCEEEEEeCCCCcccc-ccc-cccCc-ccHHHHHHHHHH
Q 008093 346 -CSSSTYVGNVSIPLLCISSLDDPVCTVEA--IPWDECRANKNVVLATTWHGGHLAF-FEG-LTAAG-MWWVRAVNEYLG 419 (578)
Q Consensus 346 -~s~~~~l~~I~vPvLiI~g~dDpivp~~~--~~~~~~~~~~~~~l~~~~~GGH~~~-~eg-~~~~~-~w~~~~v~eFL~ 419 (578)
......+.++. |+|+++|++|++++ +. +.........++++.+++++||..+ ... ..++. ..+.+.+.+||+
T Consensus 278 ~~~~~~~l~~l~-P~Lii~G~~D~~~~-~~~~~~~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~i~~fl~ 355 (361)
T 1jkm_A 278 YFASEDELRGLP-PFVVAVNELDPLRD-EGIAFARRLARAGVDVAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAA 355 (361)
T ss_dssp GGCCHHHHTTCC-CEEEEEETTCTTHH-HHHHHHHHHHHTTCCEEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHH
T ss_pred cccChhhHcCCC-ceEEEEcCcCcchh-hHHHHHHHHHHcCCCEEEEEeCCCccCccccccccccHHHHHHHHHHHHHHH
Confidence 00112456666 99999999999998 32 1122334567889999999999776 321 01222 346788999998
Q ss_pred hh
Q 008093 420 VL 421 (578)
Q Consensus 420 ~~ 421 (578)
+.
T Consensus 356 ~~ 357 (361)
T 1jkm_A 356 DR 357 (361)
T ss_dssp HH
T ss_pred Hh
Confidence 65
|
| >1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.73 E-value=1.9e-17 Score=169.57 Aligned_cols=247 Identities=13% Similarity=0.005 Sum_probs=147.8
Q ss_pred CCCC-CeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCC--CCccHHHHHHHHHHH-hCCc
Q 008093 115 PPCF-SYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTS--DSAASYIRHLVFNTA-KRGW 190 (578)
Q Consensus 115 ~~~~-~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G--~s~~~yi~~l~~~l~-~~Gy 190 (578)
.+.+ ..++..+..+|| .+.++++ + . ....|+||++||.+. ++...| ..++..++ +.||
T Consensus 50 ~~~~~~~~~~~i~~~~g-~i~~~~y-~-~--------------~~~~p~vv~~HGgg~~~g~~~~~-~~~~~~la~~~g~ 111 (311)
T 1jji_A 50 HERVERVEDRTIKGRNG-DIRVRVY-Q-Q--------------KPDSPVLVYYHGGGFVICSIESH-DALCRRIARLSNS 111 (311)
T ss_dssp TSCCSEEEEEEEEETTE-EEEEEEE-E-S--------------SSSEEEEEEECCSTTTSCCTGGG-HHHHHHHHHHHTS
T ss_pred CCCcceEEEEEecCCCC-cEEEEEE-c-C--------------CCCceEEEEECCcccccCChhHh-HHHHHHHHHHhCC
Confidence 3345 467777888887 7888887 3 1 145689999999851 344445 56778887 5799
Q ss_pred eEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH---C--CCCcEEEEEEchHHHHHHHHHhhcCCC--CCccEE
Q 008093 191 NVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHE---Y--PKAPLFAIGTSIGANILVKYLGEEGEK--TPVAGA 263 (578)
Q Consensus 191 ~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~---~--~~~~i~lvGhSmGG~ial~ya~~~p~~--~~V~~~ 263 (578)
+|+++|+||+|.++.. ...+|+.++++++.+. + +..+++++||||||++++.++...++. .+++++
T Consensus 112 ~Vv~~dyrg~g~~~~p-------~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~ 184 (311)
T 1jji_A 112 TVVSVDYRLAPEHKFP-------AAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQ 184 (311)
T ss_dssp EEEEEECCCTTTSCTT-------HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred EEEEecCCCCCCCCCC-------CcHHHHHHHHHHHHhhHHHhCCCchhEEEEEeCHHHHHHHHHHHHHHhcCCCCceEE
Confidence 9999999999987542 2357888888888653 1 234899999999999999998876541 249999
Q ss_pred EEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHH
Q 008093 264 AAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYY 343 (578)
Q Consensus 264 Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy 343 (578)
|++++..+........... ....+ ...... ...+...+.........
T Consensus 185 vl~~p~~~~~~~~~~~~~~--------------------~~~~~--~~~~~~------~~~~~~~~~~~~~~~~~----- 231 (311)
T 1jji_A 185 ILIYPVVNFVAPTPSLLEF--------------------GEGLW--ILDQKI------MSWFSEQYFSREEDKFN----- 231 (311)
T ss_dssp EEESCCCCSSSCCHHHHHT--------------------SSSCS--SCCHHH------HHHHHHHHCSSGGGGGC-----
T ss_pred EEeCCccCCCCCCccHHHh--------------------cCCCc--cCCHHH------HHHHHHHhCCCCccCCC-----
Confidence 9999887654321110000 00000 000000 00000000000000000
Q ss_pred HhCCcc-cccCCCccceEEEEeCCCCCCCCC-CcchHHHhcCCCEEEEEeCCCCccccccc-cccCcccHHHHHHHHHHh
Q 008093 344 RNCSSS-TYVGNVSIPLLCISSLDDPVCTVE-AIPWDECRANKNVVLATTWHGGHLAFFEG-LTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 344 ~~~s~~-~~l~~I~vPvLiI~g~dDpivp~~-~~~~~~~~~~~~~~l~~~~~GGH~~~~eg-~~~~~~w~~~~v~eFL~~ 420 (578)
...++. ..+..+ .|+|+++|++|++++.. .+.........++++.+++++||..+... ..+....+.+.+.+||++
T Consensus 232 ~~~~p~~~~l~~~-~P~li~~G~~D~l~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 310 (311)
T 1jji_A 232 PLASVIFADLENL-PPALIITAEYDPLRDEGEVFGQMLRRAGVEASIVRYRGVLHGFINYYPVLKAARDAINQIAALLVF 310 (311)
T ss_dssp TTTSGGGSCCTTC-CCEEEEEEEECTTHHHHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHC
T ss_pred cccCcccccccCC-ChheEEEcCcCcchHHHHHHHHHHHHcCCCEEEEEECCCCeeccccCCcCHHHHHHHHHHHHHHhh
Confidence 000111 123333 49999999999998632 12233445667899999999999765432 112223466778888764
|
| >2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A | Back alignment and structure |
|---|
Probab=99.73 E-value=1.8e-17 Score=171.15 Aligned_cols=260 Identities=12% Similarity=0.055 Sum_probs=148.3
Q ss_pred eeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCC---CCCccHHHHHHHHHHH-hCCceEEEE
Q 008093 120 YRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLT---SDSAASYIRHLVFNTA-KRGWNVVVS 195 (578)
Q Consensus 120 y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~---G~s~~~yi~~l~~~l~-~~Gy~Vvv~ 195 (578)
+..+.+...+|..+.++.+.|... ...+...|+||++||.+ ++........++..++ +.||.|+++
T Consensus 53 v~~~~v~~~~~~~~~~~~~~P~~~----------~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vv~~ 122 (338)
T 2o7r_A 53 VLTKDLALNPLHNTFVRLFLPRHA----------LYNSAKLPLVVYFHGGGFILFSAASTIFHDFCCEMAVHAGVVIASV 122 (338)
T ss_dssp EEEEEEEEETTTTEEEEEEEEGGG----------GGSSCCEEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTCEEEEE
T ss_pred EEEEEEEecCCCCeEEEEEeCCCC----------CcCCCCceEEEEEcCCcCcCCCCCchhHHHHHHHHHHHCCcEEEEe
Confidence 455556666677777777766331 00124679999999964 2222222267788887 789999999
Q ss_pred eCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCC--------CCcEEEEEEchHHHHHHHHHhhcCC------CCCcc
Q 008093 196 NHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYP--------KAPLFAIGTSIGANILVKYLGEEGE------KTPVA 261 (578)
Q Consensus 196 D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~--------~~~i~lvGhSmGG~ial~ya~~~p~------~~~V~ 261 (578)
|+||++..... ...+|+.++++++..... ..+++++||||||++++.++.++++ ..+++
T Consensus 123 d~rg~~~~~~~-------~~~~d~~~~~~~l~~~~~~~~~~~~d~~~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~ 195 (338)
T 2o7r_A 123 DYRLAPEHRLP-------AAYDDAMEALQWIKDSRDEWLTNFADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLKIK 195 (338)
T ss_dssp ECCCTTTTCTT-------HHHHHHHHHHHHHHTCCCHHHHHHEEEEEEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEE
T ss_pred cCCCCCCCCCc-------hHHHHHHHHHHHHHhCCcchhhccCCcceEEEEEeCccHHHHHHHHHHhccccccCCCCcee
Confidence 99998765321 346899999999986522 2589999999999999999988764 12699
Q ss_pred EEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHH
Q 008093 262 GAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDT 341 (578)
Q Consensus 262 ~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~ 341 (578)
++|++++.++..................... ...+.....+. ..+. +.....+......
T Consensus 196 ~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~---~~~~------------~~~~~~~~~~~~~--- 254 (338)
T 2o7r_A 196 GLVLDEPGFGGSKRTGSELRLANDSRLPTFV---LDLIWELSLPM---GADR------------DHEYCNPTAESEP--- 254 (338)
T ss_dssp EEEEESCCCCCSSCCHHHHHTTTCSSSCHHH---HHHHHHHHSCT---TCCT------------TSTTTCCC----C---
T ss_pred EEEEECCccCCCcCChhhhccCCCcccCHHH---HHHHHHHhCCC---CCCC------------CCcccCCCCCCcc---
Confidence 9999998765533211100000000000000 00000000000 0000 0000000000000
Q ss_pred HHHhCCcccccCCCccceEEEEeCCCCCCCCCC-cchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHh
Q 008093 342 YYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEA-IPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 342 yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~-~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
......+.++.+|+|+++|++|++++... +...+.....++++.+++++||..+++.. .....+.+.+.+||++
T Consensus 255 ----~~~~~~l~~~~~P~Lvi~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~g~gH~~~~~~~-~~~~~~~~~i~~Fl~~ 329 (338)
T 2o7r_A 255 ----LYSFDKIRSLGWRVMVVGCHGDPMIDRQMELAERLEKKGVDVVAQFDVGGYHAVKLEDP-EKAKQFFVILKKFVVD 329 (338)
T ss_dssp ----CTHHHHHHHHTCEEEEEEETTSTTHHHHHHHHHHHHHTTCEEEEEEESSCCTTGGGTCH-HHHHHHHHHHHHHHC-
T ss_pred ----cccHhhhcCCCCCEEEEECCCCcchHHHHHHHHHHHHCCCcEEEEEECCCceEEeccCh-HHHHHHHHHHHHHHHh
Confidence 00012233456799999999999987431 12223445678999999999998776521 1113577889999876
Q ss_pred hc
Q 008093 421 LH 422 (578)
Q Consensus 421 ~~ 422 (578)
..
T Consensus 330 ~~ 331 (338)
T 2o7r_A 330 SC 331 (338)
T ss_dssp --
T ss_pred hc
Confidence 43
|
| >3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043} | Back alignment and structure |
|---|
Probab=99.72 E-value=7.4e-17 Score=152.15 Aligned_cols=172 Identities=16% Similarity=0.226 Sum_probs=118.0
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEE
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAI 238 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lv 238 (578)
++|+||++||++++....| ......+.. .++.+|.+|++... ...+.+|+.+++++ .+ .+++++
T Consensus 16 ~~~~vv~~HG~~~~~~~~~-~~~~~~~~~---~~~~v~~~~~~~~~-------~~~~~~~~~~~~~~----~~-~~~~l~ 79 (191)
T 3bdv_A 16 QQLTMVLVPGLRDSDDEHW-QSHWERRFP---HWQRIRQREWYQAD-------LDRWVLAIRRELSV----CT-QPVILI 79 (191)
T ss_dssp TTCEEEEECCTTCCCTTSH-HHHHHHHCT---TSEECCCSCCSSCC-------HHHHHHHHHHHHHT----CS-SCEEEE
T ss_pred CCceEEEECCCCCCchhhH-HHHHHHhcC---CeEEEeccCCCCcC-------HHHHHHHHHHHHHh----cC-CCeEEE
Confidence 4688999999976664555 334443333 34567888875311 11234455444443 34 689999
Q ss_pred EEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhc
Q 008093 239 GTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKK 318 (578)
Q Consensus 239 GhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~ 318 (578)
||||||.+++.++.++++ +++++|+++++...... +..
T Consensus 80 G~S~Gg~~a~~~a~~~p~--~v~~lvl~~~~~~~~~~-------------------------------~~~--------- 117 (191)
T 3bdv_A 80 GHSFGALAACHVVQQGQE--GIAGVMLVAPAEPMRFE-------------------------------IDD--------- 117 (191)
T ss_dssp EETHHHHHHHHHHHTTCS--SEEEEEEESCCCGGGGT-------------------------------CTT---------
T ss_pred EEChHHHHHHHHHHhcCC--CccEEEEECCCcccccc-------------------------------Ccc---------
Confidence 999999999999999987 89999999887643200 000
Q ss_pred cCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccc
Q 008093 319 SRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLA 398 (578)
Q Consensus 319 ~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~ 398 (578)
...+.++++|+|+++|++|+++|.+......... +.++.+++++||+.
T Consensus 118 ------------------------------~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~ 165 (191)
T 3bdv_A 118 ------------------------------RIQASPLSVPTLTFASHNDPLMSFTRAQYWAQAW--DSELVDVGEAGHIN 165 (191)
T ss_dssp ------------------------------TSCSSCCSSCEEEEECSSBTTBCHHHHHHHHHHH--TCEEEECCSCTTSS
T ss_pred ------------------------------ccccccCCCCEEEEecCCCCcCCHHHHHHHHHhc--CCcEEEeCCCCccc
Confidence 0346778999999999999999977544322222 78999999999999
Q ss_pred cccccccCcccHHHHHHHHHHhh
Q 008093 399 FFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 399 ~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
+.++....+ ...+.+.+|++++
T Consensus 166 ~~~~~~~~~-~~~~~i~~fl~~~ 187 (191)
T 3bdv_A 166 AEAGFGPWE-YGLKRLAEFSEIL 187 (191)
T ss_dssp GGGTCSSCH-HHHHHHHHHHHTT
T ss_pred ccccchhHH-HHHHHHHHHHHHh
Confidence 886421112 2448889999876
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.72 E-value=4.6e-18 Score=192.68 Aligned_cols=238 Identities=14% Similarity=0.123 Sum_probs=154.3
Q ss_pred CeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCC--ccHH-HHHHHHHHHhCCceEEEE
Q 008093 119 SYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDS--AASY-IRHLVFNTAKRGWNVVVS 195 (578)
Q Consensus 119 ~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s--~~~y-i~~l~~~l~~~Gy~Vvv~ 195 (578)
..+...++..|| .+...++.|++. ......|+||++||.+++. ...| .......++++||+|+++
T Consensus 467 ~~~~~~~~~~~g-~l~~~~~~P~~~-----------~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~vv~~ 534 (723)
T 1xfd_A 467 KVEYRDIEIDDY-NLPMQILKPATF-----------TDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKC 534 (723)
T ss_dssp BCCBCCEEETTE-EECCBEEBCSSC-----------CSSSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEECC
T ss_pred CceEEEEEcCCc-eEEEEEEeCCCC-----------CCCCccCEEEEEcCCCCccccCccccccHHHHHhhcCCEEEEEE
Confidence 345556777888 888777766431 1124568999999986542 1111 123455677789999999
Q ss_pred eCCCCCCCCCC----CCCCCCCCchHHHHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhhc----CCCCCccEEEE
Q 008093 196 NHRGLGGVSIT----SDCFYNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEE----GEKTPVAGAAA 265 (578)
Q Consensus 196 D~RG~G~S~~~----~~~~~~~~~~~Dl~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~----p~~~~V~~~Vl 265 (578)
|+||+|++... ....+.....+|+.++++++.+.. +..+++++||||||.+++.++.++ |+ +++++|+
T Consensus 535 d~rG~g~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~p~--~~~~~v~ 612 (723)
T 1xfd_A 535 DGRGSGFQGTKLLHEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQ--TFTCGSA 612 (723)
T ss_dssp CCTTCSSSHHHHHHTTTTCTTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCC--CCSEEEE
T ss_pred CCCCCccccHHHHHHHHhccCcccHHHHHHHHHHHHhCCCcChhhEEEEEECHHHHHHHHHHHhccccCCC--eEEEEEE
Confidence 99999985211 011111234589999999987653 245899999999999999999988 77 8999999
Q ss_pred EcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHh
Q 008093 266 ICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRN 345 (578)
Q Consensus 266 is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~ 345 (578)
+++..+...... .+.. .+.. .+. .. .. .|..
T Consensus 613 ~~~~~~~~~~~~---------~~~~-------~~~~--~~~----~~--------------------~~-------~~~~ 643 (723)
T 1xfd_A 613 LSPITDFKLYAS---------AFSE-------RYLG--LHG----LD--------------------NR-------AYEM 643 (723)
T ss_dssp ESCCCCTTSSBH---------HHHH-------HHHC--CCS----SC--------------------CS-------STTT
T ss_pred ccCCcchHHhhh---------hccH-------hhcC--Ccc----CC--------------------hh-------HHHh
Confidence 998776532110 0000 0000 000 00 00 1112
Q ss_pred CCcccccCCCc-cceEEEEeCCCCCCCCCCcch---HHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 346 CSSSTYVGNVS-IPLLCISSLDDPVCTVEAIPW---DECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 346 ~s~~~~l~~I~-vPvLiI~g~dDpivp~~~~~~---~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
.+....+.+++ +|+|+++|++|+++|.+.... .......++++.+++++||..... .....+.+.+.+||++.
T Consensus 644 ~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~---~~~~~~~~~i~~fl~~~ 720 (723)
T 1xfd_A 644 TKVAHRVSALEEQQFLIIHPTADEKIHFQHTAELITQLIRGKANYSLQIYPDESHYFTSS---SLKQHLYRSIINFFVEC 720 (723)
T ss_dssp TCTHHHHTSCCSCEEEEEEETTCSSSCHHHHHHHHHHHHHTTCCCEEEEETTCCSSCCCH---HHHHHHHHHHHHHHTTT
T ss_pred cChhhHHhhcCCCCEEEEEeCCCCCcCHhHHHHHHHHHHHCCCCeEEEEECCCCcccccC---cchHHHHHHHHHHHHHH
Confidence 23345677888 899999999999999764332 233445788999999999986332 12235778899999764
Q ss_pred c
Q 008093 422 H 422 (578)
Q Consensus 422 ~ 422 (578)
+
T Consensus 721 l 721 (723)
T 1xfd_A 721 F 721 (723)
T ss_dssp T
T ss_pred h
Confidence 3
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.72 E-value=8.2e-17 Score=184.20 Aligned_cols=235 Identities=13% Similarity=0.021 Sum_probs=157.1
Q ss_pred ecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCc--cHHHHHHHHHHH-hCCceEEEEeCCCCCCC
Q 008093 127 LSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSA--ASYIRHLVFNTA-KRGWNVVVSNHRGLGGV 203 (578)
Q Consensus 127 ~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~--~~yi~~l~~~l~-~~Gy~Vvv~D~RG~G~S 203 (578)
..||..+....+.|++. ......|+||++||.+++.. ..|...+...++ ++||.|+++|+||+|.+
T Consensus 480 ~~dg~~l~~~~~~P~~~-----------~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~l~~~~G~~Vv~~D~rG~g~~ 548 (740)
T 4a5s_A 480 ILNETKFWYQMILPPHF-----------DKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQ 548 (740)
T ss_dssp EETTEEEEEEEEECTTC-----------CTTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEEECCTTCSSS
T ss_pred ccCCeEEEEEEEeCCCC-----------CCCCCccEEEEECCCCcccccccccCcCHHHHHHhcCCeEEEEEcCCCCCcC
Confidence 67898898888877542 11345799999999866521 112112234444 58999999999999976
Q ss_pred CCCCC----CCCCCCchHHHHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhH
Q 008093 204 SITSD----CFYNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDR 277 (578)
Q Consensus 204 ~~~~~----~~~~~~~~~Dl~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~ 277 (578)
..... ..+.....+|+.++++++.+.. +..+++++||||||.+++.++.++++ .++++|++++..+......
T Consensus 549 g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~--~~~~~v~~~p~~~~~~~~~ 626 (740)
T 4a5s_A 549 GDKIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSG--VFKCGIAVAPVSRWEYYDS 626 (740)
T ss_dssp CHHHHGGGTTCTTSHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHTTTCS--CCSEEEEESCCCCGGGSBH
T ss_pred ChhHHHHHHhhhCcccHHHHHHHHHHHHhcCCcCCccEEEEEECHHHHHHHHHHHhCCC--ceeEEEEcCCccchHHhhh
Confidence 43211 1111223689999999998542 23689999999999999999999988 8999999998876532211
Q ss_pred HHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCcc
Q 008093 278 FIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSI 357 (578)
Q Consensus 278 ~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~v 357 (578)
.+.. .+.. .+ ......+.|...++...+.+++.
T Consensus 627 ---------~~~~-------~~~~--~p-----------------------------~~~~~~~~~~~~~~~~~~~~i~~ 659 (740)
T 4a5s_A 627 ---------VYTE-------RYMG--LP-----------------------------TPEDNLDHYRNSTVMSRAENFKQ 659 (740)
T ss_dssp ---------HHHH-------HHHC--CS-----------------------------STTTTHHHHHHSCSGGGGGGGGG
T ss_pred ---------HHHH-------HHcC--CC-----------------------------CccccHHHHHhCCHHHHHhcCCC
Confidence 0000 0000 00 00111234455666777888887
Q ss_pred -ceEEEEeCCCCCCCCCCcch---HHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcCC
Q 008093 358 -PLLCISSLDDPVCTVEAIPW---DECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSS 424 (578)
Q Consensus 358 -PvLiI~g~dDpivp~~~~~~---~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~~ 424 (578)
|+|+++|++|+.+|.+.... .+.....++++.+++++||...... ....+.+.+.+||++.+..
T Consensus 660 ~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~H~~~~~~---~~~~~~~~i~~fl~~~l~~ 727 (740)
T 4a5s_A 660 VEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASST---AHQHIYTHMSHFIKQCFSL 727 (740)
T ss_dssp SEEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTCCSHH---HHHHHHHHHHHHHHHHTTC
T ss_pred CcEEEEEcCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCcCCCCc---cHHHHHHHHHHHHHHHcCC
Confidence 99999999999999874332 2334566789999999999864331 2235778999999987654
|
| >3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.72 E-value=8.2e-17 Score=165.67 Aligned_cols=245 Identities=9% Similarity=-0.045 Sum_probs=149.8
Q ss_pred CCCCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCC---CCCccHHHHHHHHHHHh-CCce
Q 008093 116 PCFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLT---SDSAASYIRHLVFNTAK-RGWN 191 (578)
Q Consensus 116 ~~~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~---G~s~~~yi~~l~~~l~~-~Gy~ 191 (578)
+.+..++..++..|| .+..+++.|.+ ...|+||++||.+ |+ ...| ..++..+++ .||.
T Consensus 59 ~~~~~~~~~~~~~~g-~i~~~~~~p~~---------------~~~p~vv~~HGgg~~~g~-~~~~-~~~~~~la~~~g~~ 120 (326)
T 3ga7_A 59 PSMTTRTCAVPTPYG-DVTTRLYSPQP---------------TSQATLYYLHGGGFILGN-LDTH-DRIMRLLARYTGCT 120 (326)
T ss_dssp CCCEEEEEEECCTTS-CEEEEEEESSS---------------SCSCEEEEECCSTTTSCC-TTTT-HHHHHHHHHHHCSE
T ss_pred CCcceEEEEeecCCC-CeEEEEEeCCC---------------CCCcEEEEECCCCcccCC-hhhh-HHHHHHHHHHcCCE
Confidence 344445556666777 78888887643 2349999999975 44 3344 567777777 7999
Q ss_pred EEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC-----CCCcEEEEEEchHHHHHHHHHhhcCCC----CCccE
Q 008093 192 VVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY-----PKAPLFAIGTSIGANILVKYLGEEGEK----TPVAG 262 (578)
Q Consensus 192 Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~-----~~~~i~lvGhSmGG~ial~ya~~~p~~----~~V~~ 262 (578)
|+++|+|+.+.... ....+|+.++++++.+.. +..+++++|+||||++++.++...++. ..+++
T Consensus 121 V~~~dyr~~p~~~~-------~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~ 193 (326)
T 3ga7_A 121 VIGIDYSLSPQARY-------PQAIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRCGNVIA 193 (326)
T ss_dssp EEEECCCCTTTSCT-------THHHHHHHHHHHHHHHTTTTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHTCCSSEEEE
T ss_pred EEEeeCCCCCCCCC-------CcHHHHHHHHHHHHHHhHHHhCCChhheEEEEeCHHHHHHHHHHHHHHhcCCCccCceE
Confidence 99999998765432 134589999999998753 346899999999999999998776541 13889
Q ss_pred EEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhc----cCCCCC
Q 008093 263 AAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCL----VGKFET 338 (578)
Q Consensus 263 ~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~----~~g~~~ 338 (578)
++++++..+.......... ..... ..... .+..+...+... ...+..
T Consensus 194 ~vl~~~~~~~~~~~~~~~~----------------------~~~~~-~l~~~------~~~~~~~~~~~~~~~~~~~~~~ 244 (326)
T 3ga7_A 194 ILLWYGLYGLQDSVSRRLF----------------------GGAWD-GLTRE------DLDMYEKAYLRNDEDRESPWYC 244 (326)
T ss_dssp EEEESCCCSCSCCHHHHHC----------------------CCTTT-TCCHH------HHHHHHHHHCSSGGGGGCTTTS
T ss_pred EEEeccccccCCChhHhhh----------------------cCCCC-CCCHH------HHHHHHHHhCCCCCccCCcccC
Confidence 9988877655322110000 00000 00000 000000000000 000000
Q ss_pred HHHHHHhCCcccccCCCccceEEEEeCCCCCCCCC-CcchHHHhcCCCEEEEEeCCCCccccccc-cccCcccHHHHHHH
Q 008093 339 VDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVE-AIPWDECRANKNVVLATTWHGGHLAFFEG-LTAAGMWWVRAVNE 416 (578)
Q Consensus 339 ~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~-~~~~~~~~~~~~~~l~~~~~GGH~~~~eg-~~~~~~w~~~~v~e 416 (578)
.....+.+...|+|+++|++|++++.. .+...+......+++.+++++||..+... ..+....+.+.+.+
T Consensus 245 --------~~~~~~~~~~~P~li~~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~ 316 (326)
T 3ga7_A 245 --------LFNNDLTRDVPPCFIASAEFDPLIDDSRLLHQTLQAHQQPCEYKMYPGTLHAFLHYSRMMTIADDALQDGAR 316 (326)
T ss_dssp --------GGGSCCSSCCCCEEEEEETTCTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHH
T ss_pred --------CCcchhhcCCCCEEEEecCcCcCHHHHHHHHHHHHHCCCcEEEEEeCCCccchhhhcCccHHHHHHHHHHHH
Confidence 011234456679999999999998522 11223345566899999999999664432 11222457788999
Q ss_pred HHHhhc
Q 008093 417 YLGVLH 422 (578)
Q Consensus 417 FL~~~~ 422 (578)
||++..
T Consensus 317 fl~~~l 322 (326)
T 3ga7_A 317 FFMARM 322 (326)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 998764
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.72 E-value=7.3e-17 Score=183.13 Aligned_cols=238 Identities=10% Similarity=0.008 Sum_probs=157.0
Q ss_pred eeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCc--cHHHHHHHHHH-HhCCceEEEEe
Q 008093 120 YRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSA--ASYIRHLVFNT-AKRGWNVVVSN 196 (578)
Q Consensus 120 y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~--~~yi~~l~~~l-~~~Gy~Vvv~D 196 (578)
.+...++..| ..+...++.|++. ......|+||++||.+++.. ..|...+...+ +++||.|+++|
T Consensus 468 ~~~~~~~~~~-~~l~~~~~~P~~~-----------~~~~~~p~vl~~hG~~~~~~~~~~~~~~~~~~l~~~~G~~v~~~d 535 (719)
T 1z68_A 468 EEIKKLEVDE-ITLWYKMILPPQF-----------DRSKKYPLLIQVYGGPCSQSVRSVFAVNWISYLASKEGMVIALVD 535 (719)
T ss_dssp EEEEEEEETT-EEEEEEEEECTTC-----------CSSSCEEEEEEECCCTTBCCCCCCCCCCHHHHHHHTTCCEEEEEE
T ss_pred eEEEEEecCC-eEEEEEEEeCCCC-----------CCCCCccEEEEECCCCCcCcccccchhhHHHHHHhcCCeEEEEEc
Confidence 3555677777 8888877776431 11245689999999866532 12211234444 47899999999
Q ss_pred CCCCCCCCCCCCCC----CCCCchHHHHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 197 HRGLGGVSITSDCF----YNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 197 ~RG~G~S~~~~~~~----~~~~~~~Dl~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
+||+|.+....... +.....+|+.++++++.++. +..+++++||||||.+++.++..+|+ +++++|++++..
T Consensus 536 ~rG~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~--~~~~~v~~~~~~ 613 (719)
T 1z68_A 536 GRGTAFQGDKLLYAVYRKLGVYEVEDQITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLALASGTG--LFKCGIAVAPVS 613 (719)
T ss_dssp CTTBSSSCHHHHGGGTTCTTHHHHHHHHHHHHHHHTTSCEEEEEEEEEEETHHHHHHHHHHTTSSS--CCSEEEEESCCC
T ss_pred CCCCCCCchhhHHHHhhccCcccHHHHHHHHHHHHhcCCCCCceEEEEEECHHHHHHHHHHHhCCC--ceEEEEEcCCcc
Confidence 99999875321110 11124579999999998753 23589999999999999999999987 899999999887
Q ss_pred chhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCccc
Q 008093 271 DLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSST 350 (578)
Q Consensus 271 d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~ 350 (578)
+...... .+.. .+.. .+. .....+.|...++..
T Consensus 614 ~~~~~~~---------~~~~-------~~~g--~~~-----------------------------~~~~~~~~~~~~~~~ 646 (719)
T 1z68_A 614 SWEYYAS---------VYTE-------RFMG--LPT-----------------------------KDDNLEHYKNSTVMA 646 (719)
T ss_dssp CTTTSBH---------HHHH-------HHHC--CSS-----------------------------TTTTHHHHHHTCSGG
T ss_pred ChHHhcc---------ccch-------hhcC--Ccc-----------------------------cccchhhhhhCCHhH
Confidence 6532210 0000 0000 000 000112334455667
Q ss_pred ccCCCcc-ceEEEEeCCCCCCCCCCcch---HHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhc
Q 008093 351 YVGNVSI-PLLCISSLDDPVCTVEAIPW---DECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 351 ~l~~I~v-PvLiI~g~dDpivp~~~~~~---~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~ 422 (578)
.+.++++ |+|+++|++|+++|.+.... .+.....++++.+++++||....+ ....+.+.+.+||++.+
T Consensus 647 ~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~----~~~~~~~~i~~fl~~~l 718 (719)
T 1z68_A 647 RAEYFRNVDYLLIHGTADDNVHFQNSAQIAKALVNAQVDFQAMWYSDQNHGLSGL----STNHLYTHMTHFLKQCF 718 (719)
T ss_dssp GGGGGTTSEEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTCCTH----HHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCCcEEEEEeCCCCCcCHHHHHHHHHHHHHCCCceEEEEECcCCCCCCcc----cHHHHHHHHHHHHHHhh
Confidence 7788888 89999999999999874332 223345678899999999987333 22357889999998653
|
| >2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.6e-16 Score=157.73 Aligned_cols=169 Identities=16% Similarity=0.074 Sum_probs=123.9
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC--------
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY-------- 230 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~-------- 230 (578)
..|+||++||+++ +...| ..++..|+++||+|+++|+||. ...+|+..+++++....
T Consensus 48 ~~p~vv~~HG~~~-~~~~~-~~~~~~l~~~G~~v~~~d~~~s-------------~~~~~~~~~~~~l~~~~~~~~~~~~ 112 (258)
T 2fx5_A 48 RHPVILWGNGTGA-GPSTY-AGLLSHWASHGFVVAAAETSNA-------------GTGREMLACLDYLVRENDTPYGTYS 112 (258)
T ss_dssp CEEEEEEECCTTC-CGGGG-HHHHHHHHHHTCEEEEECCSCC-------------TTSHHHHHHHHHHHHHHHSSSSTTT
T ss_pred CceEEEEECCCCC-CchhH-HHHHHHHHhCCeEEEEecCCCC-------------ccHHHHHHHHHHHHhcccccccccc
Confidence 5689999999965 45555 7889999999999999999953 12356666777665431
Q ss_pred ---CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccc
Q 008093 231 ---PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRY 307 (578)
Q Consensus 231 ---~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l 307 (578)
+..+++++||||||.+++.++. ++ ++++++++++....
T Consensus 113 ~~~~~~~i~l~G~S~GG~~a~~~a~--~~--~v~~~v~~~~~~~~----------------------------------- 153 (258)
T 2fx5_A 113 GKLNTGRVGTSGHSQGGGGSIMAGQ--DT--RVRTTAPIQPYTLG----------------------------------- 153 (258)
T ss_dssp TTEEEEEEEEEEEEHHHHHHHHHTT--ST--TCCEEEEEEECCSS-----------------------------------
T ss_pred cccCccceEEEEEChHHHHHHHhcc--Cc--CeEEEEEecCcccc-----------------------------------
Confidence 2358999999999999998872 33 68999988642210
Q ss_pred cccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCC-cchHHHhcCCCE
Q 008093 308 SRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEA-IPWDECRANKNV 386 (578)
Q Consensus 308 ~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~-~~~~~~~~~~~~ 386 (578)
..+ ....+.++++|+|+++|++|+++|.+. ..........++
T Consensus 154 --------------------------~~~-----------~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~ 196 (258)
T 2fx5_A 154 --------------------------LGH-----------DSASQRRQQGPMFLMSGGGDTIAFPYLNAQPVYRRANVPV 196 (258)
T ss_dssp --------------------------TTC-----------CGGGGGCCSSCEEEEEETTCSSSCHHHHTHHHHHHCSSCE
T ss_pred --------------------------ccc-----------chhhhccCCCCEEEEEcCCCcccCchhhHHHHHhccCCCe
Confidence 000 012456789999999999999999764 433333344679
Q ss_pred EEEEeCCCCccccccccccCcccHHHHHHHHHHhhc
Q 008093 387 VLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 387 ~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~ 422 (578)
++.+++++||+.+.+. ...+.+.+.+||+...
T Consensus 197 ~~~~~~g~~H~~~~~~----~~~~~~~i~~fl~~~l 228 (258)
T 2fx5_A 197 FWGERRYVSHFEPVGS----GGAYRGPSTAWFRFQL 228 (258)
T ss_dssp EEEEESSCCTTSSTTT----CGGGHHHHHHHHHHHH
T ss_pred EEEEECCCCCccccch----HHHHHHHHHHHHHHHh
Confidence 9999999999998873 2358899999999655
|
| >3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.71 E-value=9e-17 Score=153.98 Aligned_cols=175 Identities=16% Similarity=0.060 Sum_probs=119.9
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEe-------------CCCCCCCCCCCCCCC-CCCchHHHHHHH
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSN-------------HRGLGGVSITSDCFY-NAGWTEDAREVI 223 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D-------------~RG~G~S~~~~~~~~-~~~~~~Dl~~~i 223 (578)
...| ||++||++++.. .| ..++..+. .||+|+++| +||+|.+........ .....+++.+++
T Consensus 15 ~~~p-vv~lHG~g~~~~-~~-~~~~~~l~-~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~ 90 (209)
T 3og9_A 15 DLAP-LLLLHSTGGDEH-QL-VEIAEMIA-PSHPILSIRGRINEQGVNRYFKLRGLGGFTKENFDLESLDEETDWLTDEV 90 (209)
T ss_dssp TSCC-EEEECCTTCCTT-TT-HHHHHHHS-TTCCEEEECCSBCGGGCCBSSCBCSCTTCSGGGBCHHHHHHHHHHHHHHH
T ss_pred CCCC-EEEEeCCCCCHH-HH-HHHHHhcC-CCceEEEecCCcCCCCcccceecccccccccCCCCHHHHHHHHHHHHHHH
Confidence 4678 999999965444 44 57777777 799999999 777776532211000 012235666667
Q ss_pred HHHHHHCC--CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHh
Q 008093 224 GYLHHEYP--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQ 301 (578)
Q Consensus 224 ~~l~~~~~--~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~ 301 (578)
+.+..+++ ..+++++||||||.+++.++.++++ +++++|++++.....
T Consensus 91 ~~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~--~~~~~v~~~~~~~~~---------------------------- 140 (209)
T 3og9_A 91 SLLAEKHDLDVHKMIAIGYSNGANVALNMFLRGKI--NFDKIIAFHGMQLED---------------------------- 140 (209)
T ss_dssp HHHHHHHTCCGGGCEEEEETHHHHHHHHHHHTTSC--CCSEEEEESCCCCCC----------------------------
T ss_pred HHHHHhcCCCcceEEEEEECHHHHHHHHHHHhCCc--ccceEEEECCCCCCc----------------------------
Confidence 66666553 3689999999999999999999998 899999987644210
Q ss_pred hhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcch---H
Q 008093 302 LHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPW---D 378 (578)
Q Consensus 302 ~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~---~ 378 (578)
.......+++|+|+++|++|+++|.+.... .
T Consensus 141 ----------------------------------------------~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~ 174 (209)
T 3og9_A 141 ----------------------------------------------FEQTVQLDDKHVFLSYAPNDMIVPQKNFGDLKGD 174 (209)
T ss_dssp ----------------------------------------------CCCCCCCTTCEEEEEECTTCSSSCHHHHHHHHHH
T ss_pred ----------------------------------------------ccccccccCCCEEEEcCCCCCccCHHHHHHHHHH
Confidence 000123467899999999999999764322 2
Q ss_pred HHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 379 ECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 379 ~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
......++++.+++ +||....+ ..+.+.+||++.
T Consensus 175 l~~~~~~~~~~~~~-~gH~~~~~--------~~~~~~~~l~~~ 208 (209)
T 3og9_A 175 LEDSGCQLEIYESS-LGHQLTQE--------EVLAAKKWLTET 208 (209)
T ss_dssp HHHTTCEEEEEECS-STTSCCHH--------HHHHHHHHHHHH
T ss_pred HHHcCCceEEEEcC-CCCcCCHH--------HHHHHHHHHHhh
Confidence 33444567888887 89954322 457788888763
|
| >3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP} | Back alignment and structure |
|---|
Probab=99.70 E-value=2e-15 Score=155.50 Aligned_cols=220 Identities=15% Similarity=0.098 Sum_probs=129.5
Q ss_pred CCCcEEEEECCC-CCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEE
Q 008093 158 DTTPIAIVIPGL-TSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLF 236 (578)
Q Consensus 158 ~~~PiVVllHGl-~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~ 236 (578)
..+|+||++||+ .+++...| ..++..| ..||+|+++|+||||.++... ....+.+.++++.+....+..+++
T Consensus 79 ~~~~~lv~lhG~~~~~~~~~~-~~~~~~L-~~~~~v~~~d~~G~G~~~~~~-----~~~~~~~~~~~~~l~~~~~~~~~~ 151 (319)
T 3lcr_A 79 QLGPQLILVCPTVMTTGPQVY-SRLAEEL-DAGRRVSALVPPGFHGGQALP-----ATLTVLVRSLADVVQAEVADGEFA 151 (319)
T ss_dssp CSSCEEEEECCSSTTCSGGGG-HHHHHHH-CTTSEEEEEECTTSSTTCCEE-----SSHHHHHHHHHHHHHHHHTTSCEE
T ss_pred CCCCeEEEECCCCcCCCHHHH-HHHHHHh-CCCceEEEeeCCCCCCCCCCC-----CCHHHHHHHHHHHHHHhcCCCCEE
Confidence 456889999997 34455556 7788888 679999999999999865331 122333444455555544567999
Q ss_pred EEEEchHHHHHHHHHhhc---CCCCCccEEEEEcCCcchhh--hhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccC
Q 008093 237 AIGTSIGANILVKYLGEE---GEKTPVAGAAAICSPWDLLI--GDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLA 311 (578)
Q Consensus 237 lvGhSmGG~ial~ya~~~---p~~~~V~~~Vlis~p~d~~~--~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~ 311 (578)
++||||||.+++.++.+. ++ +++++|+++++..... ....+. ..+....+ ... . .+.. .
T Consensus 152 lvGhS~Gg~vA~~~A~~~~~~~~--~v~~lvl~~~~~~~~~~~~~~~~~----~~~~~~~~----~~~-~----~~~~-~ 215 (319)
T 3lcr_A 152 LAGHSSGGVVAYEVARELEARGL--APRGVVLIDSYSFDGDGGRPEELF----RSALNERF----VEY-L----RLTG-G 215 (319)
T ss_dssp EEEETHHHHHHHHHHHHHHHTTC--CCSCEEEESCCCCCSSCCHHHHHH----HHHHHHHH----HHH-H----HHHC-C
T ss_pred EEEECHHHHHHHHHHHHHHhcCC--CccEEEEECCCCCCccchhhHHHH----HHHHHHHH----hhh-h----cccC-C
Confidence 999999999999999887 66 7999999987543322 111111 11111100 000 0 0000 0
Q ss_pred CHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEe
Q 008093 312 NWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATT 391 (578)
Q Consensus 312 d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~ 391 (578)
+ .+.+... ....++..... .....|++|+|+|+|++| +++................++++
T Consensus 216 ~--------~~~~~l~----------~~~~~~~~~~~-~~~~~i~~PvLli~g~~~-~~~~~~~~~~~~~~~~~~~~~~~ 275 (319)
T 3lcr_A 216 G--------NLSQRIT----------AQVWCLELLRG-WRPEGLTAPTLYVRPAQP-LVEQEKPEWRGDVLAAMGQVVEA 275 (319)
T ss_dssp C--------CHHHHHH----------HHHHHHHHTTT-CCCCCCSSCEEEEEESSC-SSSCCCTHHHHHHHHTCSEEEEE
T ss_pred C--------chhHHHH----------HHHHHHHHHhc-CCCCCcCCCEEEEEeCCC-CCCcccchhhhhcCCCCceEEEe
Confidence 0 0000000 01112211111 123678999999999985 45544333323333345666666
Q ss_pred CCCCccccccccccCcccHHHHHHHHHHhhcC
Q 008093 392 WHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHS 423 (578)
Q Consensus 392 ~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~ 423 (578)
+ |||+.+++. +....+.+.|.+||++...
T Consensus 276 ~-g~H~~~~~~--~~~~~va~~i~~fL~~~~~ 304 (319)
T 3lcr_A 276 P-GDHFTIIEG--EHVASTAHIVGDWLREAHA 304 (319)
T ss_dssp S-SCTTGGGST--TTHHHHHHHHHHHHHHHHC
T ss_pred C-CCcHHhhCc--ccHHHHHHHHHHHHHhccc
Confidence 6 588888862 2334689999999998643
|
| >2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A | Back alignment and structure |
|---|
Probab=99.70 E-value=3.6e-17 Score=184.53 Aligned_cols=278 Identities=17% Similarity=0.129 Sum_probs=165.2
Q ss_pred eEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCC-------ccHHHHHH--H-HHHHhCCc
Q 008093 121 RRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDS-------AASYIRHL--V-FNTAKRGW 190 (578)
Q Consensus 121 ~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s-------~~~yi~~l--~-~~l~~~Gy 190 (578)
+...+++.||..|..+++.|.+ ....|+||++||+++.. ...|...+ . ..|+++||
T Consensus 38 ~~v~i~~~DG~~L~~~l~~P~~--------------~~~~PvIl~~hpyg~~~~~~~~~~~~~~~~~~~~~~~~la~~Gy 103 (652)
T 2b9v_A 38 REVMVPMRDGVKLYTVIVIPKN--------------ARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGY 103 (652)
T ss_dssp EEEEEECTTSCEEEEEEEEETT--------------CCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTC
T ss_pred EEEEEECCCCcEEEEEEEecCC--------------CCCccEEEEECCCCCCcccccccccccccccccchHHHHHhCCC
Confidence 4456788899999999887643 13568999999885321 01121112 2 77889999
Q ss_pred eEEEEeCCCCCCCCCCCCCC------CC---CCchHHHHHHHHHHHHHCC--CCcEEEEEEchHHHHHHHHHhhcCCCCC
Q 008093 191 NVVVSNHRGLGGVSITSDCF------YN---AGWTEDAREVIGYLHHEYP--KAPLFAIGTSIGANILVKYLGEEGEKTP 259 (578)
Q Consensus 191 ~Vvv~D~RG~G~S~~~~~~~------~~---~~~~~Dl~~~i~~l~~~~~--~~~i~lvGhSmGG~ial~ya~~~p~~~~ 259 (578)
.|+++|+||+|+|....... +. ....+|+.++++++.++++ +.++.++|+||||++++.+|++.++ .
T Consensus 104 aVv~~D~RG~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~d~rvgl~G~SyGG~~al~~a~~~~~--~ 181 (652)
T 2b9v_A 104 IRVFQDIRGKYGSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHP--A 181 (652)
T ss_dssp EEEEEECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCT--T
T ss_pred EEEEEecCcCCCCCCcccccccccccccccccchhhHHHHHHHHHHhcCCCCCCCEEEEecCHHHHHHHHHHhcCCC--c
Confidence 99999999999997654332 12 1566899999999988733 4589999999999999999988877 8
Q ss_pred ccEEEEEcCCcchhhhhHHHhhHHH-HHHHHHHHHHhHHHHHhhhccccccc--CCHHHHhccCCHHH------------
Q 008093 260 VAGAAAICSPWDLLIGDRFIGRRLI-QKIYDRALTIGLQDYAQLHEPRYSRL--ANWEGIKKSRSIRD------------ 324 (578)
Q Consensus 260 V~~~Vlis~p~d~~~~~~~l~~~~~-~~~~~~~l~~~l~~~~~~~~~~l~~~--~d~~~i~~~~s~~e------------ 324 (578)
++++|.++++.|...+........+ ...+...... ...+.....+... ..+..........+
T Consensus 182 lka~v~~~~~~d~~~~d~~~~~G~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 258 (652)
T 2b9v_A 182 LKVAAPESPMVDGWMGDDWFHYGAFRQGAFDYFVSQ---MTARGGGNDIPRRDADDYTNFLKAGSAGSFATQAGLDQYPF 258 (652)
T ss_dssp EEEEEEEEECCCTTTBSSSEETTEEBTTHHHHHHHH---HSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGCHH
T ss_pred eEEEEecccccccccccceecCCchhhhhHHHHHHh---hhcccCcccccccchHHHHHHhhcCchhhHHHhhccccchH
Confidence 9999999998886531100000000 0000110000 0000000000000 00111011111111
Q ss_pred HHhhhhhccCCCCCHHHHHHhCCcccccCC--CccceEEEEeCCCCCCCCC-Ccch--HHHhcC--CCEEEEEeCCCCcc
Q 008093 325 FDSHATCLVGKFETVDTYYRNCSSSTYVGN--VSIPLLCISSLDDPVCTVE-AIPW--DECRAN--KNVVLATTWHGGHL 397 (578)
Q Consensus 325 fd~~~~~~~~g~~~~~~yy~~~s~~~~l~~--I~vPvLiI~g~dDpivp~~-~~~~--~~~~~~--~~~~l~~~~~GGH~ 397 (578)
|++.+. ....++||+..++...+++ |++|+|+++|.+|+. +.. .... .+.... ....+++.+. +|.
T Consensus 259 ~~~~~~-----~p~~d~yw~~~Sp~~~~~~~~I~~PvLiv~G~~D~~-~~~~~~~~~~aL~~~g~~~~~~lvigp~-~H~ 331 (652)
T 2b9v_A 259 WQRMHA-----HPAYDAFWQGQALDKILAQRKPTVPMLWEQGLWDQE-DMWGAIHAWQALKDADVKAPNTLVMGPW-RHS 331 (652)
T ss_dssp HHHHHH-----CCSSSHHHHTTCHHHHHHHHCCCSCEEEEEETTCSS-CSSHHHHHHHHHHHTTCSSCEEEEEESC-CTT
T ss_pred HHHHHh-----CCCCChHHhcCChhhhhhcCCCCCCEEEEeecCCcc-ccccHHHHHHHHHhcCCCCCCEEEECCC-CCC
Confidence 122211 2234689999898888999 999999999999997 433 3222 222333 4467777665 787
Q ss_pred ccccc-ccc---------CcccHHHHHHHHHHhhcCC
Q 008093 398 AFFEG-LTA---------AGMWWVRAVNEYLGVLHSS 424 (578)
Q Consensus 398 ~~~eg-~~~---------~~~w~~~~v~eFL~~~~~~ 424 (578)
.+.+. ..+ ...+..+.+.+|++..+..
T Consensus 332 ~~~~~~~~~~~~~f~~~~~~~~~~~~~~~wfd~~Lkg 368 (652)
T 2b9v_A 332 GVNYNGSTLGPLEFEGDTAHQYRRDVFRPFFDEYLKP 368 (652)
T ss_dssp GGGSCCSEETTEECSSCHHHHHHHHTHHHHHHHHHST
T ss_pred CcccccccCCccccccccchhhhhhHHHHHHHHHhCC
Confidence 64310 000 0123467788898887654
|
| >3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A | Back alignment and structure |
|---|
Probab=99.70 E-value=3.1e-16 Score=161.59 Aligned_cols=236 Identities=14% Similarity=0.077 Sum_probs=142.8
Q ss_pred EEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCC--CCCccHHHHHHHHHHHh-CCceEEEEeCCCCCCCCCCCC
Q 008093 132 MIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLT--SDSAASYIRHLVFNTAK-RGWNVVVSNHRGLGGVSITSD 208 (578)
Q Consensus 132 ~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~--G~s~~~yi~~l~~~l~~-~Gy~Vvv~D~RG~G~S~~~~~ 208 (578)
.+.++|+.|.. ....|+||++||.+ .++...| ..++..+++ .||.|+++|+|+.+..+.
T Consensus 66 ~i~~~~~~p~~--------------~~~~p~vv~~HGGg~~~g~~~~~-~~~~~~la~~~g~~vv~~dyr~~p~~~~--- 127 (322)
T 3fak_A 66 GCAAEWVRAPG--------------CQAGKAILYLHGGGYVMGSINTH-RSMVGEISRASQAAALLLDYRLAPEHPF--- 127 (322)
T ss_dssp TEEEEEEECTT--------------CCTTCEEEEECCSTTTSCCHHHH-HHHHHHHHHHHTSEEEEECCCCTTTSCT---
T ss_pred CeEEEEEeCCC--------------CCCccEEEEEcCCccccCChHHH-HHHHHHHHHhcCCEEEEEeCCCCCCCCC---
Confidence 47888887643 24579999999953 1344445 456666665 699999999998765432
Q ss_pred CCCCCCchHHHHHHHHHHHHH-CCCCcEEEEEEchHHHHHHHHHhhcCCC--CCccEEEEEcCCcchhhhhHHHhhHHHH
Q 008093 209 CFYNAGWTEDAREVIGYLHHE-YPKAPLFAIGTSIGANILVKYLGEEGEK--TPVAGAAAICSPWDLLIGDRFIGRRLIQ 285 (578)
Q Consensus 209 ~~~~~~~~~Dl~~~i~~l~~~-~~~~~i~lvGhSmGG~ial~ya~~~p~~--~~V~~~Vlis~p~d~~~~~~~l~~~~~~ 285 (578)
....+|+.++++++.+. .+..+++++|+|+||++++.++...++. ..++++|++++..+...........
T Consensus 128 ----~~~~~D~~~a~~~l~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~--- 200 (322)
T 3fak_A 128 ----PAAVEDGVAAYRWLLDQGFKPQHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADMTCTNDSFKTR--- 200 (322)
T ss_dssp ----THHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTHHHHT---
T ss_pred ----CcHHHHHHHHHHHHHHcCCCCceEEEEEcCcCHHHHHHHHHHHHhcCCCCceEEEEECCEecCcCCCcCHHHh---
Confidence 13468999999999987 5567899999999999999998776541 2489999999887764321111000
Q ss_pred HHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcc-cccCCCccceEEEEe
Q 008093 286 KIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSS-TYVGNVSIPLLCISS 364 (578)
Q Consensus 286 ~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~-~~l~~I~vPvLiI~g 364 (578)
....+.+ ....+..+...+........ ...++. ..+.. ..|+|+++|
T Consensus 201 ---------------~~~~~~~----------~~~~~~~~~~~~~~~~~~~~------~~~sp~~~~~~~-~pP~li~~g 248 (322)
T 3fak_A 201 ---------------AEADPMV----------APGGINKMAARYLNGADAKH------PYASPNFANLKG-LPPLLIHVG 248 (322)
T ss_dssp ---------------TTTCCSC----------CSSHHHHHHHHHHTTSCTTC------TTTCGGGSCCTT-CCCEEEEEE
T ss_pred ---------------CccCccc----------CHHHHHHHHHHhcCCCCCCC------cccCCCcccccC-CChHhEEEc
Confidence 0000000 00001111111110000000 001111 11222 249999999
Q ss_pred CCCCCCCCC-CcchHHHhcCCCEEEEEeCCCCccccccc-cccCcccHHHHHHHHHHhhcCC
Q 008093 365 LDDPVCTVE-AIPWDECRANKNVVLATTWHGGHLAFFEG-LTAAGMWWVRAVNEYLGVLHSS 424 (578)
Q Consensus 365 ~dDpivp~~-~~~~~~~~~~~~~~l~~~~~GGH~~~~eg-~~~~~~w~~~~v~eFL~~~~~~ 424 (578)
++|++++.. .+.........++++.++++++|...... ..+....+.+.+.+||++.+..
T Consensus 249 ~~D~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~~ 310 (322)
T 3fak_A 249 RDEVLLDDSIKLDAKAKADGVKSTLEIWDDMIHVWHAFHPMLPEGKQAIVRVGEFMREQWAA 310 (322)
T ss_dssp TTSTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHHC
T ss_pred CcCccHHHHHHHHHHHHHcCCCEEEEEeCCceeehhhccCCCHHHHHHHHHHHHHHHHHHhc
Confidence 999986422 12223445667899999999999554321 1122345778999999987654
|
| >4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.9e-16 Score=179.64 Aligned_cols=246 Identities=13% Similarity=0.007 Sum_probs=162.6
Q ss_pred eeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCcc-HHHHHHHHHHHhCCceEEEEeCC
Q 008093 120 YRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAA-SYIRHLVFNTAKRGWNVVVSNHR 198 (578)
Q Consensus 120 y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~-~yi~~l~~~l~~~Gy~Vvv~D~R 198 (578)
.++..++..||..+....+.|.+. ..+.+.|+||++||..+.+.. .|.......++++||.|+++|+|
T Consensus 449 ~e~v~~~s~DG~~i~~~l~~P~~~-----------~~~~~~P~vl~~HGG~~~~~~~~~~~~~~q~la~~Gy~Vv~~d~R 517 (711)
T 4hvt_A 449 LEQKEATSFDGVKIPYFLVYKKGI-----------KFDGKNPTLLEAYGGFQVINAPYFSRIKNEVWVKNAGVSVLANIR 517 (711)
T ss_dssp EEEEEEECTTSCEEEEEEEEETTC-----------CCSSCCCEEEECCCCTTCCCCCCCCHHHHHHTGGGTCEEEEECCT
T ss_pred eEEEEEECCCCeEEEEEEEecCCC-----------CCCCCccEEEEECCCCCCCCCCcccHHHHHHHHHCCCEEEEEeCC
Confidence 355667888999999888776542 113567999999997555443 23122234778899999999999
Q ss_pred CCCCCCCC----CCCCCCCCchHHHHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcch
Q 008093 199 GLGGVSIT----SDCFYNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (578)
Q Consensus 199 G~G~S~~~----~~~~~~~~~~~Dl~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~ 272 (578)
|+|+.... ..........+|+.++++++.++. ...+++++|+|+||.+++.++..+|+ .++++|+.++..|+
T Consensus 518 Gsg~~G~~~~~~~~~~~~~~~~~D~~aav~~L~~~~~~d~~rI~i~G~S~GG~la~~~a~~~pd--~f~a~V~~~pv~D~ 595 (711)
T 4hvt_A 518 GGGEFGPEWHKSAQGIKRQTAFNDFFAVSEELIKQNITSPEYLGIKGGSNGGLLVSVAMTQRPE--LFGAVACEVPILDM 595 (711)
T ss_dssp TSSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGG--GCSEEEEESCCCCT
T ss_pred CCCCcchhHHHhhhhccCcCcHHHHHHHHHHHHHcCCCCcccEEEEeECHHHHHHHHHHHhCcC--ceEEEEEeCCccch
Confidence 99876321 011111123479999999998763 23589999999999999999999888 89999999988876
Q ss_pred hhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCccccc
Q 008093 273 LIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYV 352 (578)
Q Consensus 273 ~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l 352 (578)
.......... .+ ..++. .+ ......+++...++...+
T Consensus 596 ~~~~~~~~~~-----------------------------~~--------~~~~G----~p--~~~~~~~~l~~~SP~~~v 632 (711)
T 4hvt_A 596 IRYKEFGAGH-----------------------------SW--------VTEYG----DP--EIPNDLLHIKKYAPLENL 632 (711)
T ss_dssp TTGGGSTTGG-----------------------------GG--------HHHHC----CT--TSHHHHHHHHHHCGGGSC
T ss_pred hhhhccccch-----------------------------HH--------HHHhC----CC--cCHHHHHHHHHcCHHHHH
Confidence 4321100000 00 00000 00 000123455666788889
Q ss_pred CCCcc--ceEEEEeCCCCCCCCCCcch---HH-HhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcC
Q 008093 353 GNVSI--PLLCISSLDDPVCTVEAIPW---DE-CRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHS 423 (578)
Q Consensus 353 ~~I~v--PvLiI~g~dDpivp~~~~~~---~~-~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~ 423 (578)
.++++ |+|+++|.+|+.||+..... .+ ......+.+.+++++||...... .........+.+||.+...
T Consensus 633 ~~i~~~pPvLii~G~~D~~Vp~~~s~~~~~aL~~~~g~pv~l~~~p~~gHg~~~~~--~~~~~~~~~i~~FL~~~Lg 707 (711)
T 4hvt_A 633 SLTQKYPTVLITDSVLDQRVHPWHGRIFEYVLAQNPNTKTYFLESKDSGHGSGSDL--KESANYFINLYTFFANALK 707 (711)
T ss_dssp CTTSCCCEEEEEEETTCCSSCTHHHHHHHHHHTTCTTCCEEEEEESSCCSSSCSSH--HHHHHHHHHHHHHHHHHHT
T ss_pred hhcCCCCCEEEEecCCCCcCChHHHHHHHHHHHHHcCCCEEEEEECCCCCcCcCCc--chHHHHHHHHHHHHHHHhC
Confidence 99987 99999999999999874332 12 23346789999999999643321 1122455678899987654
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.4e-16 Score=181.02 Aligned_cols=247 Identities=14% Similarity=0.063 Sum_probs=159.4
Q ss_pred eeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCC
Q 008093 120 YRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRG 199 (578)
Q Consensus 120 y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG 199 (578)
.++..++..||..+.+..+.|.+. ..+...|+||++||..+.+...........++++||.|+++|+||
T Consensus 417 ~~~~~~~~~dg~~i~~~~~~p~~~-----------~~~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG 485 (695)
T 2bkl_A 417 VEQVFYASKDGTKVPMFVVHRKDL-----------KRDGNAPTLLYGYGGFNVNMEANFRSSILPWLDAGGVYAVANLRG 485 (695)
T ss_dssp EEEEEEECTTSCEEEEEEEEETTC-----------CCSSCCCEEEECCCCTTCCCCCCCCGGGHHHHHTTCEEEEECCTT
T ss_pred EEEEEEECCCCCEEEEEEEECCCC-----------CCCCCccEEEEECCCCccccCCCcCHHHHHHHhCCCEEEEEecCC
Confidence 455567778999998887776431 113467999999996555543211334456778899999999999
Q ss_pred CCCCCCC---CC-CCCCCCchHHHHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchh
Q 008093 200 LGGVSIT---SD-CFYNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL 273 (578)
Q Consensus 200 ~G~S~~~---~~-~~~~~~~~~Dl~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~ 273 (578)
+|++... .. ........+|+.++++++.++. ...+++++|+||||.+++.++.++|+ .++++|+.++..++.
T Consensus 486 ~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~~~~~p~--~~~~~v~~~~~~d~~ 563 (695)
T 2bkl_A 486 GGEYGKAWHDAGRLDKKQNVFDDFHAAAEYLVQQKYTQPKRLAIYGGSNGGLLVGAAMTQRPE--LYGAVVCAVPLLDMV 563 (695)
T ss_dssp SSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGG--GCSEEEEESCCCCTT
T ss_pred CCCcCHHHHHhhHhhcCCCcHHHHHHHHHHHHHcCCCCcccEEEEEECHHHHHHHHHHHhCCc--ceEEEEEcCCccchh
Confidence 9876321 00 0111123489999999998764 34589999999999999999999888 899999999887764
Q ss_pred hhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccC
Q 008093 274 IGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVG 353 (578)
Q Consensus 274 ~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~ 353 (578)
.......... + ..++. .+ ......+++...++...+.
T Consensus 564 ~~~~~~~~~~-----------------------------~--------~~~~g----~~--~~~~~~~~~~~~sp~~~~~ 600 (695)
T 2bkl_A 564 RYHLFGSGRT-----------------------------W--------IPEYG----TA--EKPEDFKTLHAYSPYHHVR 600 (695)
T ss_dssp TGGGSTTGGG-----------------------------G--------HHHHC----CT--TSHHHHHHHHHHCGGGCCC
T ss_pred hccccCCCcc-----------------------------h--------HHHhC----CC--CCHHHHHHHHhcChHhhhh
Confidence 3211000000 0 00000 00 0001112334456667777
Q ss_pred CCc--cceEEEEeCCCCCCCCCCcchHH---Hh---cCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcCC
Q 008093 354 NVS--IPLLCISSLDDPVCTVEAIPWDE---CR---ANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSS 424 (578)
Q Consensus 354 ~I~--vPvLiI~g~dDpivp~~~~~~~~---~~---~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~~ 424 (578)
+++ .|+|+++|.+|+.||+....... .. ...++.+.+++++||...... .....+...+.+||.+....
T Consensus 601 ~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~--~~~~~~~~~~~~fl~~~l~~ 677 (695)
T 2bkl_A 601 PDVRYPALLMMAADHDDRVDPMHARKFVAAVQNSPGNPATALLRIEANAGHGGADQV--AKAIESSVDLYSFLFQVLDV 677 (695)
T ss_dssp SSCCCCEEEEEEETTCSSSCTHHHHHHHHHHHTSTTCCSCEEEEEETTCBTTBCSCH--HHHHHHHHHHHHHHHHHTTC
T ss_pred hcCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhhccCCCCEEEEEeCCCCcCCCCCH--HHHHHHHHHHHHHHHHHcCC
Confidence 766 69999999999999987433221 12 245689999999999763210 11223567799999887654
|
| >3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.69 E-value=9.7e-17 Score=165.35 Aligned_cols=222 Identities=9% Similarity=-0.008 Sum_probs=131.2
Q ss_pred CCCcEEEEECCCC--CCCccHHHHHHHHHHH-hCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCc
Q 008093 158 DTTPIAIVIPGLT--SDSAASYIRHLVFNTA-KRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAP 234 (578)
Q Consensus 158 ~~~PiVVllHGl~--G~s~~~yi~~l~~~l~-~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~ 234 (578)
...|+||++||.+ +++...| ..++..++ +.||+|+++|+||.+.... ....+|+.++++++.+..+..+
T Consensus 94 ~~~p~vv~lHGgg~~~~~~~~~-~~~~~~la~~~g~~vi~~D~r~~~~~~~-------~~~~~d~~~~~~~l~~~~~~~~ 165 (326)
T 3d7r_A 94 QIDKKILYIHGGFNALQPSPFH-WRLLDKITLSTLYEVVLPIYPKTPEFHI-------DDTFQAIQRVYDQLVSEVGHQN 165 (326)
T ss_dssp CCSSEEEEECCSTTTSCCCHHH-HHHHHHHHHHHCSEEEEECCCCTTTSCH-------HHHHHHHHHHHHHHHHHHCGGG
T ss_pred CCCeEEEEECCCcccCCCCHHH-HHHHHHHHHHhCCEEEEEeCCCCCCCCc-------hHHHHHHHHHHHHHHhccCCCc
Confidence 3568999999942 2344445 55677776 4599999999998664221 1245899999999988777779
Q ss_pred EEEEEEchHHHHHHHHHhhcCCC--CCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCC
Q 008093 235 LFAIGTSIGANILVKYLGEEGEK--TPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLAN 312 (578)
Q Consensus 235 i~lvGhSmGG~ial~ya~~~p~~--~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d 312 (578)
++++||||||.+++.++...++. ..++++|++++..+............ . .. ... ..
T Consensus 166 i~l~G~S~GG~lAl~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~-~---~~-------------~~~----~~ 224 (326)
T 3d7r_A 166 VVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDATLSNKDISDAL-I---EQ-------------DAV----LS 224 (326)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTTCCHHH-H---HH-------------CSS----CC
T ss_pred EEEEEECHHHHHHHHHHHHHHhcCCCCCCeEEEECcccccCcCChhHHhhh-c---cc-------------Ccc----cC
Confidence 99999999999999999877651 24999999998776532211100000 0 00 000 00
Q ss_pred HHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcc-cccCCCccceEEEEeCCCCCCCCC-CcchHHHhcCCCEEEEE
Q 008093 313 WEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSS-TYVGNVSIPLLCISSLDDPVCTVE-AIPWDECRANKNVVLAT 390 (578)
Q Consensus 313 ~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~-~~l~~I~vPvLiI~g~dDpivp~~-~~~~~~~~~~~~~~l~~ 390 (578)
... +..+...+.... .... ...++. ..+.. ..|+|+++|++|++++.. ...........++++.+
T Consensus 225 ~~~------~~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~-~~P~lii~G~~D~~~~~~~~~~~~l~~~~~~~~~~~ 291 (326)
T 3d7r_A 225 QFG------VNEIMKKWANGL-PLTD-----KRISPINGTIEG-LPPVYMFGGGREMTHPDMKLFEQMMLQHHQYIEFYD 291 (326)
T ss_dssp HHH------HHHHHHHHHTTS-CTTS-----TTTSGGGSCCTT-CCCEEEEEETTSTTHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHH------HHHHHHHhcCCC-CCCC-----CeECcccCCccc-CCCEEEEEeCcccchHHHHHHHHHHHHCCCcEEEEE
Confidence 000 000000000000 0000 000011 11222 259999999999765422 12222345567899999
Q ss_pred eCCCCccccccccccCcccHHHHHHHHHHhhc
Q 008093 391 TWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 391 ~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~ 422 (578)
++++||...... .++...+.+.+.+||++..
T Consensus 292 ~~g~~H~~~~~~-~~~~~~~~~~i~~fl~~~l 322 (326)
T 3d7r_A 292 YPKMVHDFPIYP-IRQSHKAIKQIAKSIDEDV 322 (326)
T ss_dssp ETTCCTTGGGSS-SHHHHHHHHHHHHHHTSCC
T ss_pred eCCCcccccccC-CHHHHHHHHHHHHHHHHHh
Confidence 999999887731 1123357788999987654
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=2.2e-16 Score=179.78 Aligned_cols=246 Identities=15% Similarity=0.073 Sum_probs=158.6
Q ss_pred eeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHh-CCceEEEEeCC
Q 008093 120 YRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAK-RGWNVVVSNHR 198 (578)
Q Consensus 120 y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~-~Gy~Vvv~D~R 198 (578)
.++..++..||..+.+..+.|.+. ..+...|+||++||..+.+...........+++ +||.|+++|+|
T Consensus 437 ~~~~~~~~~dg~~i~~~~~~p~~~-----------~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~~G~~v~~~d~r 505 (710)
T 2xdw_A 437 TVQIFYPSKDGTKIPMFIVHKKGI-----------KLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIR 505 (710)
T ss_dssp EEEEEEECTTSCEEEEEEEEETTC-----------CCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCT
T ss_pred EEEEEEEcCCCCEEEEEEEecCCC-----------CCCCCccEEEEEcCCCCCcCCCcccHHHHHHHHhCCcEEEEEccC
Confidence 355567778999998877776441 113467999999998665543211333445666 89999999999
Q ss_pred CCCCCCCCC----CCCCCCCchHHHHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcch
Q 008093 199 GLGGVSITS----DCFYNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (578)
Q Consensus 199 G~G~S~~~~----~~~~~~~~~~Dl~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~ 272 (578)
|+|++.... .........+|+.++++++.++. ...+++++|+||||.+++.++.++|+ +++++|+.++..++
T Consensus 506 G~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~a~~~p~--~~~~~v~~~~~~d~ 583 (710)
T 2xdw_A 506 GGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPD--LFGCVIAQVGVMDM 583 (710)
T ss_dssp TSSTTHHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGG--GCSEEEEESCCCCT
T ss_pred CCCCCChHHHHhhhhhcCCchHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHHhCcc--ceeEEEEcCCcccH
Confidence 999763210 00111123479999999998763 34589999999999999999999988 89999999988776
Q ss_pred hhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCccccc
Q 008093 273 LIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYV 352 (578)
Q Consensus 273 ~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l 352 (578)
.......... .+ ..++. .+ ......+++...++...+
T Consensus 584 ~~~~~~~~~~-----------------------------~~--------~~~~g----~~--~~~~~~~~~~~~sp~~~~ 620 (710)
T 2xdw_A 584 LKFHKYTIGH-----------------------------AW--------TTDYG----CS--DSKQHFEWLIKYSPLHNV 620 (710)
T ss_dssp TTGGGSTTGG-----------------------------GG--------HHHHC----CT--TSHHHHHHHHHHCGGGCC
T ss_pred hhccccCCCh-----------------------------hH--------HHhCC----CC--CCHHHHHHHHHhCcHhhh
Confidence 4321100000 00 00000 00 000111233344566667
Q ss_pred C-----CCcc-ceEEEEeCCCCCCCCCCcch---HHHhc-------CCCEEEEEeCCCCccccccccccCcccHHHHHHH
Q 008093 353 G-----NVSI-PLLCISSLDDPVCTVEAIPW---DECRA-------NKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNE 416 (578)
Q Consensus 353 ~-----~I~v-PvLiI~g~dDpivp~~~~~~---~~~~~-------~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~e 416 (578)
. ++++ |+|+++|.+|+.||+..... .+... ...+.+.+++++||...... .....+.+.+.+
T Consensus 621 ~~~~~~~~~~pP~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~--~~~~~~~~~~~~ 698 (710)
T 2xdw_A 621 KLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHVDTKAGHGAGKPT--AKVIEEVSDMFA 698 (710)
T ss_dssp CCCSSTTCCCCEEEEEEETTCCSSCTHHHHHHHHHHHHHTTTSTTCCSCEEEEEESSCCSSTTCCH--HHHHHHHHHHHH
T ss_pred cccccccCCCCcEEEEEeCCCCccChhHHHHHHHHHHhhhccccCCCcCEEEEEeCCCCcCCCCCH--HHHHHHHHHHHH
Confidence 7 7887 99999999999999864322 12223 45689999999999764321 112246678899
Q ss_pred HHHhhcC
Q 008093 417 YLGVLHS 423 (578)
Q Consensus 417 FL~~~~~ 423 (578)
||.+...
T Consensus 699 fl~~~l~ 705 (710)
T 2xdw_A 699 FIARCLN 705 (710)
T ss_dssp HHHHHHT
T ss_pred HHHHHcC
Confidence 9987654
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.69 E-value=2.4e-16 Score=180.38 Aligned_cols=245 Identities=15% Similarity=0.083 Sum_probs=154.4
Q ss_pred eeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCC
Q 008093 120 YRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRG 199 (578)
Q Consensus 120 y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG 199 (578)
.++..++..||..+.+..+.|.+. +...|+||++||..+.+...........++++||.|+++|+||
T Consensus 461 ~~~~~~~~~dg~~i~~~~~~p~~~-------------~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG 527 (741)
T 1yr2_A 461 VEQVFYPSKDGTKVPMFIVRRKDA-------------KGPLPTLLYGYGGFNVALTPWFSAGFMTWIDSGGAFALANLRG 527 (741)
T ss_dssp EEEEEEECTTSCEEEEEEEEETTC-------------CSCCCEEEECCCCTTCCCCCCCCHHHHHHHTTTCEEEEECCTT
T ss_pred EEEEEEEcCCCCEEEEEEEecCCC-------------CCCCcEEEEECCCCCccCCCCcCHHHHHHHHCCcEEEEEecCC
Confidence 455667778999998877766431 2467999999998665543222344557788999999999999
Q ss_pred CCCCCCCC----CCCCCCCchHHHHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchh
Q 008093 200 LGGVSITS----DCFYNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL 273 (578)
Q Consensus 200 ~G~S~~~~----~~~~~~~~~~Dl~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~ 273 (578)
+|++.... .........+|+.++++++.++. ...+++++|+||||.+++.++.++|+ .++++|+.++..++.
T Consensus 528 ~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~ri~i~G~S~GG~la~~~~~~~p~--~~~~~v~~~~~~d~~ 605 (741)
T 1yr2_A 528 GGEYGDAWHDAGRRDKKQNVFDDFIAAGEWLIANGVTPRHGLAIEGGSNGGLLIGAVTNQRPD--LFAAASPAVGVMDML 605 (741)
T ss_dssp SSTTHHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHHCGG--GCSEEEEESCCCCTT
T ss_pred CCCCCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHEEEEEECHHHHHHHHHHHhCch--hheEEEecCCccccc
Confidence 99863110 00111123589999999998763 34689999999999999999999988 899999998887664
Q ss_pred hhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccC
Q 008093 274 IGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVG 353 (578)
Q Consensus 274 ~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~ 353 (578)
......... .+ ..++. .+ .-....+++...++...+.
T Consensus 606 ~~~~~~~~~-----------------------------~~--------~~~~g----~~--~~~~~~~~~~~~sp~~~~~ 642 (741)
T 1yr2_A 606 RFDQFTAGR-----------------------------YW--------VDDYG----YP--EKEADWRVLRRYSPYHNVR 642 (741)
T ss_dssp SGGGSTTGG-----------------------------GG--------HHHHC----CT--TSHHHHHHHHTTCGGGCCC
T ss_pred cccCCCCCc-----------------------------hh--------HHHcC----CC--CCHHHHHHHHHcCchhhhh
Confidence 311000000 00 00000 00 0001123445566777788
Q ss_pred C-Ccc-ceEEEEeCCCCCCCCCCcchH---HHh---cCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcCC
Q 008093 354 N-VSI-PLLCISSLDDPVCTVEAIPWD---ECR---ANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSS 424 (578)
Q Consensus 354 ~-I~v-PvLiI~g~dDpivp~~~~~~~---~~~---~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~~ 424 (578)
+ +++ |+|+++|.+|+.||+...... +.. ....+.+.+++++||....+. .....+.+.+.+||......
T Consensus 643 ~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~g~~~~l~~~~~~gH~~~~~~--~~~~~~~~~~~~fl~~~l~~ 719 (741)
T 1yr2_A 643 SGVDYPAILVTTADTDDRVVPGHSFKYTAALQTAAIGPKPHLIRIETRAGHGSGKPI--DKQIEETADVQAFLAHFTGL 719 (741)
T ss_dssp TTSCCCEEEEEECSCCSSSCTHHHHHHHHHHHHSCCCSSCEEEEEC---------CH--HHHHHHHHHHHHHHHHHHTC
T ss_pred ccCCCCCEEEEeeCCCCCCChhHHHHHHHHHhhhhcCCCCEEEEEeCCCCcCCCCCH--HHHHHHHHHHHHHHHHHcCC
Confidence 7 885 999999999999998743321 223 345689999999999764321 11224667889999887644
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=2.8e-16 Score=178.69 Aligned_cols=248 Identities=16% Similarity=0.042 Sum_probs=156.4
Q ss_pred eeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCC
Q 008093 120 YRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRG 199 (578)
Q Consensus 120 y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG 199 (578)
.++..++..||..+.+..+.|.+. ..+...|+||++||..+.+...........++++||.|+++|+||
T Consensus 425 ~~~~~~~~~dg~~i~~~l~~p~~~-----------~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG 493 (693)
T 3iuj_A 425 SEQRFYQSKDGTRVPLIISYRKGL-----------KLDGSNPTILYGYGGFDVSLTPSFSVSVANWLDLGGVYAVANLRG 493 (693)
T ss_dssp EEEEEEECTTSCEEEEEEEEESSC-----------CCSSCCCEEEECCCCTTCCCCCCCCHHHHHHHHTTCEEEEECCTT
T ss_pred eEEEEEecCCCcEEEEEEEecCCC-----------CCCCCccEEEEECCCCCcCCCCccCHHHHHHHHCCCEEEEEeCCC
Confidence 355567778999998887776531 113467999999997665444322445567888999999999999
Q ss_pred CCCCCCCC----CCCCCCCchHHHHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchh
Q 008093 200 LGGVSITS----DCFYNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL 273 (578)
Q Consensus 200 ~G~S~~~~----~~~~~~~~~~Dl~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~ 273 (578)
+|+..... .........+|+.++++++.++. ...+++++|+|+||++++.++.++|+ .++++|+.++..|+.
T Consensus 494 ~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~~~~~p~--~~~a~v~~~~~~d~~ 571 (693)
T 3iuj_A 494 GGEYGQAWHLAGTQQNKQNVFDDFIAAAEYLKAEGYTRTDRLAIRGGSNGGLLVGAVMTQRPD--LMRVALPAVGVLDML 571 (693)
T ss_dssp SSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCTT--SCSEEEEESCCCCTT
T ss_pred CCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHhhCcc--ceeEEEecCCcchhh
Confidence 98653210 00111123479999999998763 33689999999999999999999998 899999999888764
Q ss_pred hhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccC
Q 008093 274 IGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVG 353 (578)
Q Consensus 274 ~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~ 353 (578)
......... ....++. .+ .......+++...++...+.
T Consensus 572 ~~~~~~~~~-------------------------------------~~~~~~g----~p-~~~~~~~~~~~~~sp~~~~~ 609 (693)
T 3iuj_A 572 RYHTFTAGT-------------------------------------GWAYDYG----TS-ADSEAMFDYLKGYSPLHNVR 609 (693)
T ss_dssp TGGGSGGGG-------------------------------------GCHHHHC----CT-TSCHHHHHHHHHHCHHHHCC
T ss_pred hhccCCCch-------------------------------------hHHHHcC----Cc-cCHHHHHHHHHhcCHHHhhc
Confidence 321100000 0000000 00 00000123445556777788
Q ss_pred C-Cccc-eEEEEeCCCCCCCCCCcch---HHHhc---CCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcCC
Q 008093 354 N-VSIP-LLCISSLDDPVCTVEAIPW---DECRA---NKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSS 424 (578)
Q Consensus 354 ~-I~vP-vLiI~g~dDpivp~~~~~~---~~~~~---~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~~ 424 (578)
+ +++| +|+++|.+|+.||+..... .+... ...+.+.+++++||...... .........+.+||......
T Consensus 610 ~~~~~Pp~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~--~~~~~~~~~~~~fl~~~l~~ 686 (693)
T 3iuj_A 610 PGVSYPSTMVTTADHDDRVVPAHSFKFAATLQADNAGPHPQLIRIETNAGHGAGTPV--AKLIEQSADIYAFTLYEMGY 686 (693)
T ss_dssp TTCCCCEEEEEEESSCSSSCTHHHHHHHHHHHHHCCSSSCEEEEEEC-------CHH--HHHHHHHHHHHHHHHHHTTC
T ss_pred ccCCCCceeEEecCCCCCCChhHHHHHHHHHHhhCCCCCCEEEEEeCCCCCCCcccH--HHHHHHHHHHHHHHHHHcCC
Confidence 8 8998 9999999999999874332 12222 24689999999999754310 11223567788999887643
|
| >3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.69 E-value=6.4e-16 Score=154.10 Aligned_cols=131 Identities=11% Similarity=0.094 Sum_probs=94.0
Q ss_pred cCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHH--HHHHHHhCCceEEEEeCCCCCCCCC
Q 008093 128 SDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRH--LVFNTAKRGWNVVVSNHRGLGGVSI 205 (578)
Q Consensus 128 ~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~--l~~~l~~~Gy~Vvv~D~RG~G~S~~ 205 (578)
.+|..+.++.+.|++. . +...|+||++||++++ ...|... +...+.+.||.|+++|+||+|.+..
T Consensus 24 ~~g~~~~~~v~~P~~~-----------~-~~~~p~vv~lHG~~~~-~~~~~~~~~~~~~~~~~g~~vv~~d~~g~G~s~~ 90 (278)
T 3e4d_A 24 TLKSEMTFAVYVPPKA-----------I-HEPCPVVWYLSGLTCT-HANVMEKGEYRRMASELGLVVVCPDTSPRGNDVP 90 (278)
T ss_dssp TTTEEEEEEEEECGGG-----------G-TSCEEEEEEECCTTCC-SHHHHHHSCCHHHHHHHTCEEEECCSSCCSTTSC
T ss_pred ccCCcceEEEEcCCCC-----------C-CCCCCEEEEEcCCCCC-ccchhhcccHHHHHhhCCeEEEecCCcccCcccc
Confidence 4688888888877431 0 3467999999999654 4444222 4555666799999999999998854
Q ss_pred CCCCCCC---------C----------CchHHH-HHHHHHHHHHCCC--CcEEEEEEchHHHHHHHHHhhcCCCCCccEE
Q 008093 206 TSDCFYN---------A----------GWTEDA-REVIGYLHHEYPK--APLFAIGTSIGANILVKYLGEEGEKTPVAGA 263 (578)
Q Consensus 206 ~~~~~~~---------~----------~~~~Dl-~~~i~~l~~~~~~--~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~ 263 (578)
.....+. . .+.+.+ .++++++.+.++. .+++++||||||.+++.++..+|+ .++++
T Consensus 91 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~--~~~~~ 168 (278)
T 3e4d_A 91 DELTNWQMGKGAGFYLDATEEPWSEHYQMYSYVTEELPALIGQHFRADMSRQSIFGHSMGGHGAMTIALKNPE--RFKSC 168 (278)
T ss_dssp CCTTCTTSBTTBCTTSBCCSTTTTTTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTT--TCSCE
T ss_pred cccccccccCCccccccCCcCcccchhhHHHHHHHHHHHHHHhhcCCCcCCeEEEEEChHHHHHHHHHHhCCc--ccceE
Confidence 4311111 0 112232 3577777777654 789999999999999999999998 89999
Q ss_pred EEEcCCcchh
Q 008093 264 AAICSPWDLL 273 (578)
Q Consensus 264 Vlis~p~d~~ 273 (578)
+++++..+..
T Consensus 169 v~~~~~~~~~ 178 (278)
T 3e4d_A 169 SAFAPIVAPS 178 (278)
T ss_dssp EEESCCSCGG
T ss_pred EEeCCccccc
Confidence 9999877654
|
| >3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.68 E-value=2.2e-16 Score=152.38 Aligned_cols=177 Identities=15% Similarity=-0.038 Sum_probs=121.4
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCC-----CCCCCCCCC----CCchHHHHHHHHHHHH
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGV-----SITSDCFYN----AGWTEDAREVIGYLHH 228 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S-----~~~~~~~~~----~~~~~Dl~~~i~~l~~ 228 (578)
..+|+||++||++++.. .| ..++..+.+ ||+|+++|.+|+... ......... ....+|+.++++++.+
T Consensus 28 ~~~p~vv~lHG~g~~~~-~~-~~~~~~l~~-~~~vv~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 104 (223)
T 3b5e_A 28 ESRECLFLLHGSGVDET-TL-VPLARRIAP-TATLVAARGRIPQEDGFRWFERIDPTRFEQKSILAETAAFAAFTNEAAK 104 (223)
T ss_dssp SCCCEEEEECCTTBCTT-TT-HHHHHHHCT-TSEEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEecCCCCHH-HH-HHHHHhcCC-CceEEEeCCCCCcCCccccccccCCCcccHHHHHHHHHHHHHHHHHHHH
Confidence 34589999999965444 45 567777775 999999998874211 000000000 1123577777777776
Q ss_pred HC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhccc
Q 008093 229 EY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPR 306 (578)
Q Consensus 229 ~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~ 306 (578)
++ +..+++++||||||.+++.++.++++ +++++|++++.....
T Consensus 105 ~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~--~~~~~v~~~~~~~~~--------------------------------- 149 (223)
T 3b5e_A 105 RHGLNLDHATFLGYSNGANLVSSLMLLHPG--IVRLAALLRPMPVLD--------------------------------- 149 (223)
T ss_dssp HHTCCGGGEEEEEETHHHHHHHHHHHHSTT--SCSEEEEESCCCCCS---------------------------------
T ss_pred HhCCCCCcEEEEEECcHHHHHHHHHHhCcc--ccceEEEecCccCcc---------------------------------
Confidence 64 34689999999999999999999988 899999998754220
Q ss_pred ccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcch--HHHhcCC
Q 008093 307 YSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPW--DECRANK 384 (578)
Q Consensus 307 l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~--~~~~~~~ 384 (578)
. ......+++|+|+++|++|+++|.+.... .......
T Consensus 150 ------------~-----------------------------~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~l~~~g~ 188 (223)
T 3b5e_A 150 ------------H-----------------------------VPATDLAGIRTLIIAGAADETYGPFVPALVTLLSRHGA 188 (223)
T ss_dssp ------------S-----------------------------CCCCCCTTCEEEEEEETTCTTTGGGHHHHHHHHHHTTC
T ss_pred ------------c-----------------------------cccccccCCCEEEEeCCCCCcCCHHHHHHHHHHHHCCC
Confidence 0 00123467999999999999999874432 1223344
Q ss_pred CEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhc
Q 008093 385 NVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 385 ~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~ 422 (578)
++++.+++ +||....+ ..+.+.+||++..
T Consensus 189 ~~~~~~~~-~gH~~~~~--------~~~~i~~~l~~~~ 217 (223)
T 3b5e_A 189 EVDARIIP-SGHDIGDP--------DAAIVRQWLAGPI 217 (223)
T ss_dssp EEEEEEES-CCSCCCHH--------HHHHHHHHHHCC-
T ss_pred ceEEEEec-CCCCcCHH--------HHHHHHHHHHhhh
Confidence 78999999 99976544 3468889988644
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.68 E-value=9e-16 Score=176.16 Aligned_cols=250 Identities=14% Similarity=0.054 Sum_probs=158.2
Q ss_pred eeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCC
Q 008093 120 YRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRG 199 (578)
Q Consensus 120 y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG 199 (578)
.++..++..||..+...++.+.+. ..+...|+||++||..+.+....+......|+++||.|+++|+||
T Consensus 480 ~~~~~~~s~dG~~i~~~l~~p~~~-----------~~~~~~P~vl~~HGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG 548 (751)
T 2xe4_A 480 VERRFATAPDQTKIPLSVVYHKDL-----------DMSQPQPCMLYGYGSYGLSMDPQFSIQHLPYCDRGMIFAIAHIRG 548 (751)
T ss_dssp EEEEEEECTTCCEEEEEEEEETTS-----------CTTSCCCEEEECCCCTTCCCCCCCCGGGHHHHTTTCEEEEECCTT
T ss_pred EEEEEEECCCCcEEEEEEEcCCCC-----------CCCCCccEEEEECCCCCcCCCCcchHHHHHHHhCCcEEEEEeeCC
Confidence 355567778999998877766431 112467999999997665442111334557788999999999999
Q ss_pred CCCCCCCC----CC-CCCCCchHHHHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcch
Q 008093 200 LGGVSITS----DC-FYNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (578)
Q Consensus 200 ~G~S~~~~----~~-~~~~~~~~Dl~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~ 272 (578)
+|++.... .. .......+|+.++++++.++. ...+++++|+|+||.+++.++..+|+ .++++|+.++..|+
T Consensus 549 ~g~~G~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~a~~~p~--~~~a~v~~~~~~d~ 626 (751)
T 2xe4_A 549 GSELGRAWYEIGAKYLTKRNTFSDFIAAAEFLVNAKLTTPSQLACEGRSAGGLLMGAVLNMRPD--LFKVALAGVPFVDV 626 (751)
T ss_dssp SCTTCTHHHHTTSSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGG--GCSEEEEESCCCCH
T ss_pred CCCcCcchhhccccccccCccHHHHHHHHHHHHHCCCCCcccEEEEEECHHHHHHHHHHHhCch--heeEEEEeCCcchH
Confidence 99753210 10 001123479999999998763 34689999999999999999999888 89999999888765
Q ss_pred hhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCccccc
Q 008093 273 LIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYV 352 (578)
Q Consensus 273 ~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l 352 (578)
..... .... +.. ...+.. +..+ .-....+++...++...+
T Consensus 627 ~~~~~--~~~~---------------------~~~--------------~~~~~~-~g~p--~~~~~~~~~~~~sp~~~~ 666 (751)
T 2xe4_A 627 MTTMC--DPSI---------------------PLT--------------TGEWEE-WGNP--NEYKYYDYMLSYSPMDNV 666 (751)
T ss_dssp HHHHT--CTTS---------------------TTH--------------HHHTTT-TCCT--TSHHHHHHHHHHCTGGGC
T ss_pred Hhhhc--ccCc---------------------ccc--------------hhhHHH-cCCC--CCHHHHHHHHhcChhhhh
Confidence 32100 0000 000 000000 0000 000112344556777888
Q ss_pred CCCccc-eEEEEeCCCCCCCCCCcch---HHHhc---CCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcCC
Q 008093 353 GNVSIP-LLCISSLDDPVCTVEAIPW---DECRA---NKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSS 424 (578)
Q Consensus 353 ~~I~vP-vLiI~g~dDpivp~~~~~~---~~~~~---~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~~ 424 (578)
.++++| +|+++|++|+.||...... .+... ...+.+.+++++||....+. ++.......+.+||.+....
T Consensus 667 ~~~~~Pp~Lii~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~--~~~~~~~~~~~~Fl~~~l~~ 743 (751)
T 2xe4_A 667 RAQEYPNIMVQCGLHDPRVAYWEPAKWVSKLRECKTDNNEILLNIDMESGHFSAKDR--YKFWKESAIQQAFVCKHLKS 743 (751)
T ss_dssp CSSCCCEEEEEEETTCSSSCTHHHHHHHHHHHHHCCSCCCEEEEEETTCCSSCCSSH--HHHHHHHHHHHHHHHHHTTC
T ss_pred ccCCCCceeEEeeCCCCCCCHHHHHHHHHHHHhcCCCCceEEEEECCCCCCCCcCCh--hHHHHHHHHHHHHHHHHhCC
Confidence 899997 9999999999999874322 12222 23345666699999765431 12222445789999887654
|
| >1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A | Back alignment and structure |
|---|
Probab=99.67 E-value=5.1e-16 Score=158.00 Aligned_cols=219 Identities=15% Similarity=0.080 Sum_probs=129.2
Q ss_pred CCCcEEEEECCCCCCCc-cHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEE
Q 008093 158 DTTPIAIVIPGLTSDSA-ASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLF 236 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~-~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~ 236 (578)
..+|+||++||++++.. ..| ..++..+. .+|+|+++|+||||.|+... ....+.+.++++.+....+..+++
T Consensus 65 ~~~~~lvllhG~~~~~~~~~~-~~~~~~l~-~~~~v~~~d~~G~G~s~~~~-----~~~~~~a~~~~~~l~~~~~~~~~~ 137 (300)
T 1kez_A 65 PGEVTVICCAGTAAISGPHEF-TRLAGALR-GIAPVRAVPQPGYEEGEPLP-----SSMAAVAAVQADAVIRTQGDKPFV 137 (300)
T ss_dssp SCSSEEEECCCSSTTCSTTTT-HHHHHHTS-SSCCBCCCCCTTSSTTCCBC-----SSHHHHHHHHHHHHHHHCSSCCEE
T ss_pred CCCCeEEEECCCcccCcHHHH-HHHHHhcC-CCceEEEecCCCCCCCCCCC-----CCHHHHHHHHHHHHHHhcCCCCEE
Confidence 45688999999976542 344 66777765 46999999999999975431 122233344444666667778999
Q ss_pred EEEEchHHHHHHHHHhhcCC-CCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHH
Q 008093 237 AIGTSIGANILVKYLGEEGE-KTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEG 315 (578)
Q Consensus 237 lvGhSmGG~ial~ya~~~p~-~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~ 315 (578)
++||||||.+++.++.++++ ..+++++|+++++..... ..+ ..+... + .. ..+.. ..
T Consensus 138 LvGhS~GG~vA~~~A~~~p~~g~~v~~lvl~~~~~~~~~--~~~-----~~~~~~-----~---~~---~~~~~-~~--- 195 (300)
T 1kez_A 138 VAGHSAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQ--DAM-----NAWLEE-----L---TA---TLFDR-ET--- 195 (300)
T ss_dssp EECCTHHHHHHHHHHHHTTTTTCCCSEEECBTCCCTTTC--HHH-----HHHHHH-----H---HG---GGCCC-CS---
T ss_pred EEEECHhHHHHHHHHHHHHhcCCCccEEEEECCCCCcch--hHH-----HHHHHH-----H---HH---HHHhC-cC---
Confidence 99999999999999999873 127999999987653321 011 111110 0 00 00000 00
Q ss_pred HhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCC
Q 008093 316 IKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGG 395 (578)
Q Consensus 316 i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GG 395 (578)
..+.+.. . .....|+..... ....++++|+|+|+|+ |++++.....+ ......+.++.++++ |
T Consensus 196 ----~~~~~~~--~-------~~~~~~~~~~~~-~~~~~i~~P~lii~G~-d~~~~~~~~~~-~~~~~~~~~~~~i~g-g 258 (300)
T 1kez_A 196 ----VRMDDTR--L-------TALGAYDRLTGQ-WRPRETGLPTLLVSAG-EPMGPWPDDSW-KPTWPFEHDTVAVPG-D 258 (300)
T ss_dssp ----SCCCHHH--H-------HHHHHHHHHTTT-CCCCCCSCCBEEEEES-SCSSCCCSSCC-SCCCSSCCEEEEESS-C
T ss_pred ----CccchHH--H-------HHHHHHHHHHhc-CCCCCCCCCEEEEEeC-CCCCCCcccch-hhhcCCCCeEEEecC-C
Confidence 0000000 0 001122222111 2357899999999995 55555443222 122233578889998 9
Q ss_pred ccccccccccCcccHHHHHHHHHHhhcCCC
Q 008093 396 HLAFFEGLTAAGMWWVRAVNEYLGVLHSSP 425 (578)
Q Consensus 396 H~~~~eg~~~~~~w~~~~v~eFL~~~~~~~ 425 (578)
|+.+++ .....+.+.|.+||++.....
T Consensus 259 H~~~~~---e~~~~~~~~i~~fl~~~~~~~ 285 (300)
T 1kez_A 259 HFTMVQ---EHADAIARHIDAWLGGGNSSS 285 (300)
T ss_dssp TTTSSS---SCSHHHHHHHHHHHTCC----
T ss_pred Chhhcc---ccHHHHHHHHHHHHHhccCCC
Confidence 999873 123468899999998765443
|
| >4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.67 E-value=2.6e-15 Score=158.37 Aligned_cols=254 Identities=12% Similarity=0.087 Sum_probs=138.7
Q ss_pred CCCcEEEEECCCCCCCcc--------HHHHHHHHHHH-hCCceEEEEeCCCCCCCCCCCCCCCCCCc--hHHHHHHHHHH
Q 008093 158 DTTPIAIVIPGLTSDSAA--------SYIRHLVFNTA-KRGWNVVVSNHRGLGGVSITSDCFYNAGW--TEDAREVIGYL 226 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~--------~yi~~l~~~l~-~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~--~~Dl~~~i~~l 226 (578)
...|+|++.||..++... .| .++..++ ++||+|+++|+||+|.|... ...|..+. ..|+.+.++.+
T Consensus 72 ~~~PvV~~~HG~~~~~~~~ps~~~~~~~--~~~~~lal~~Gy~Vv~~D~rG~G~s~~~-~~~~~~~~~~~~~~~D~~~a~ 148 (377)
T 4ezi_A 72 GQVGIISYQHGTRFERNDVPSRNNEKNY--IYLAAYGNSAGYMTVMPDYLGLGDNELT-LHPYVQAETLASSSIDMLFAA 148 (377)
T ss_dssp SCEEEEEEECCCCCSTTCSGGGCCGGGH--HHHHHHTTTTCCEEEEECCTTSTTCCCS-SCCTTCHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCcCCcccCCCcCcccch--HHHHHHHHhCCcEEEEeCCCCCCCCCCC-CcccccchhHHHHHHHHHHHH
Confidence 457999999998653221 12 3455677 89999999999999998752 22232211 12333333322
Q ss_pred ---HHHC---CCCcEEEEEEchHHHHHHHHHhhcCC---CCCccEEEEEcCCcchhhhhHHHhhHH--HHHHHHHHHHHh
Q 008093 227 ---HHEY---PKAPLFAIGTSIGANILVKYLGEEGE---KTPVAGAAAICSPWDLLIGDRFIGRRL--IQKIYDRALTIG 295 (578)
Q Consensus 227 ---~~~~---~~~~i~lvGhSmGG~ial~ya~~~p~---~~~V~~~Vlis~p~d~~~~~~~l~~~~--~~~~~~~~l~~~ 295 (578)
.... +..+++++||||||.+++.++...++ +..+.+++..++|.|+......+.... ....+..+....
T Consensus 149 ~~~~~~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~~~~~l~l~g~~~~~~p~dl~~~~~~~~~~~~~~~~~~~g~~~~~ 228 (377)
T 4ezi_A 149 KELANRLHYPISDKLYLAGYSEGGFSTIVMFEMLAKEYPDLPVSAVAPGSAPYGWEETMHFVMLEPGPRATAYLAYFFYS 228 (377)
T ss_dssp HHHHHHTTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTSCCCEEEEESCCCCHHHHHHHHHHSCCTTHHHHHHHHHHH
T ss_pred HHHhhccCCCCCCceEEEEECHHHHHHHHHHHHhhhhCCCCceEEEEecCcccCHHHHHHHHhcCCCcccchhHHHHHHH
Confidence 2222 24689999999999999988876543 236999999999999876654443210 000000111111
Q ss_pred HHHHHhhhcccccccCCH------HHHhc-cCCHHHH--------Hhhhhhcc------CCCCCHHHHHHhCCcccccCC
Q 008093 296 LQDYAQLHEPRYSRLANW------EGIKK-SRSIRDF--------DSHATCLV------GKFETVDTYYRNCSSSTYVGN 354 (578)
Q Consensus 296 l~~~~~~~~~~l~~~~d~------~~i~~-~~s~~ef--------d~~~~~~~------~g~~~~~~yy~~~s~~~~l~~ 354 (578)
+..+...+ +.+...... +.... .....+. ...+.... ..-..+...+.+.... -.+
T Consensus 229 ~~g~~~~y-p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~--~~~ 305 (377)
T 4ezi_A 229 LQTYKSYW-SGFDEIFAPPYNTLIPELMDGYHAVDEILQALPQDPLLIFQPKFSNGIISKTDRNTEILKINFNHY--DFK 305 (377)
T ss_dssp HHHHHCCS-SCHHHHBCTTHHHHHHHHTSSCSCHHHHHHHSCSSGGGGBCHHHHHHHHTTCSTTHHHHHHHHCCC--CSC
T ss_pred HHHHHHhc-cCHHHHhCHHHHHHHHHHhhcccchhhhhhccCCCHHHHhchhhhhhcccccchHHHHHHHHhccc--CCC
Confidence 22221111 111110000 00000 0011110 00000000 0112233333332221 236
Q ss_pred CccceEEEEeCCCCCCCCCCcch---HHHhcCCCEEEEEeCC--CCccccccccccCcccHHHHHHHHHHhhcCCC
Q 008093 355 VSIPLLCISSLDDPVCTVEAIPW---DECRANKNVVLATTWH--GGHLAFFEGLTAAGMWWVRAVNEYLGVLHSSP 425 (578)
Q Consensus 355 I~vPvLiI~g~dDpivp~~~~~~---~~~~~~~~~~l~~~~~--GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~~~ 425 (578)
+++|+|+++|.+|+++|.+.... ..+.... +++..+++ ++|..... .....+.+||+++....
T Consensus 306 ~~~Pvli~hG~~D~~Vp~~~~~~l~~~l~~~G~-v~~~~~~~~~~~H~~~~~-------~~~~~~~~wl~~~~~~~ 373 (377)
T 4ezi_A 306 PTAPLLLVGTKGDRDVPYAGAEMAYHSFRKYSD-FVWIKSVSDALDHVQAHP-------FVLKEQVDFFKQFERQE 373 (377)
T ss_dssp CSSCEEEEECTTCSSSCHHHHHHHHHHHHTTCS-CEEEEESCSSCCTTTTHH-------HHHHHHHHHHHHHHTSS
T ss_pred CCCCEEEEecCCCCCCCHHHHHHHHHHHHhcCC-EEEEEcCCCCCCccChHH-------HHHHHHHHHHHHhhcch
Confidence 79999999999999999874332 2334455 89999998 78865332 24578899999876643
|
| >3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A | Back alignment and structure |
|---|
Probab=99.67 E-value=7.7e-16 Score=153.85 Aligned_cols=230 Identities=13% Similarity=0.121 Sum_probs=141.0
Q ss_pred EEEEe-cCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHH--HHHHHHhCCceEEEEeCCC
Q 008093 123 QLFRL-SDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRH--LVFNTAKRGWNVVVSNHRG 199 (578)
Q Consensus 123 ~~l~~-~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~--l~~~l~~~Gy~Vvv~D~RG 199 (578)
..+.. .+|..+.++.+.|+.. ..+...|+||++||++++.. .|... +...+.+.||.|+++|.||
T Consensus 20 ~~~~s~~~g~~~~~~v~~P~~~-----------~~~~~~p~vv~lHG~~~~~~-~~~~~~~~~~~~~~~g~~vv~pd~~~ 87 (280)
T 3i6y_A 20 YSHVSNTLNCAMRFAIYLPPQA-----------STGAKVPVLYWLSGLTCSDE-NFMQKAGAQRLAAELGIAIVAPDTSP 87 (280)
T ss_dssp EEEEETTTTEEEEEEEEECGGG-----------GTTCCEEEEEEECCTTCCSS-HHHHHSCCHHHHHHHTCEEEEECSSC
T ss_pred EEEeccccCCeeEEEEEeCCCC-----------CCCCCccEEEEecCCCCChh-HHhhcccHHHHHhhCCeEEEEeCCcc
Confidence 33433 4788888888877431 11356799999999965444 44332 4566677899999999998
Q ss_pred CCCCCCCCCC--------CCCC----------CchHHH-HHHHHHHHHHCCC-CcEEEEEEchHHHHHHHHHhhcCCCCC
Q 008093 200 LGGVSITSDC--------FYNA----------GWTEDA-REVIGYLHHEYPK-APLFAIGTSIGANILVKYLGEEGEKTP 259 (578)
Q Consensus 200 ~G~S~~~~~~--------~~~~----------~~~~Dl-~~~i~~l~~~~~~-~~i~lvGhSmGG~ial~ya~~~p~~~~ 259 (578)
+|.+...... .|.. .+.+++ .+++.++.+.++. .+++++||||||.+++.++..+|+ .
T Consensus 88 ~g~~~~~~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~--~ 165 (280)
T 3i6y_A 88 RGEGVADDEGYDLGQGAGFYVNATQAPWNRHYQMYDYVVNELPELIESMFPVSDKRAIAGHSMGGHGALTIALRNPE--R 165 (280)
T ss_dssp CSTTCCCCSSTTSSTTCCTTCBCCSTTGGGTCBHHHHHHTHHHHHHHHHSSEEEEEEEEEETHHHHHHHHHHHHCTT--T
T ss_pred cccccCcccccccccCccccccccCCCccchhhHHHHHHHHHHHHHHHhCCCCCCeEEEEECHHHHHHHHHHHhCCc--c
Confidence 8765322110 0110 112233 4666777777765 789999999999999999999998 8
Q ss_pred ccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCH
Q 008093 260 VAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETV 339 (578)
Q Consensus 260 V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~ 339 (578)
+++++++++..+..... +....+. .+..... ..+.
T Consensus 166 ~~~~v~~s~~~~~~~~~------~~~~~~~--------~~~~~~~------------------~~~~------------- 200 (280)
T 3i6y_A 166 YQSVSAFSPINNPVNCP------WGQKAFT--------AYLGKDT------------------DTWR------------- 200 (280)
T ss_dssp CSCEEEESCCCCGGGSH------HHHHHHH--------HHHCSCG------------------GGTG-------------
T ss_pred ccEEEEeCCccccccCc------hHHHHHH--------HhcCCch------------------HHHH-------------
Confidence 99999999877654321 0001111 1110000 0000
Q ss_pred HHHHHhCCcccccCCC--ccceEEEEeCCCCCCCCC----CcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHH
Q 008093 340 DTYYRNCSSSTYVGNV--SIPLLCISSLDDPVCTVE----AIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRA 413 (578)
Q Consensus 340 ~~yy~~~s~~~~l~~I--~vPvLiI~g~dDpivp~~----~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~ 413 (578)
..++...+.++ .+|+|+++|++|++++.+ .....+.....++++.+++++||.-++- . .+.+.
T Consensus 201 -----~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~----~--~~~~~ 269 (280)
T 3i6y_A 201 -----EYDASLLMRAAKQYVPALVDQGEADNFLAEQLKPEVLEAAASSNNYPLELRSHEGYDHSYYFI----A--SFIED 269 (280)
T ss_dssp -----GGCHHHHHHHCSSCCCEEEEEETTCTTHHHHTCHHHHHHHHHHTTCCEEEEEETTCCSSHHHH----H--HHHHH
T ss_pred -----hcCHHHHHHhcCCCccEEEEEeCCCccccchhhHHHHHHHHHHcCCCceEEEeCCCCccHHHH----H--HhHHH
Confidence 00111111122 589999999999999863 2223344566789999999999953221 0 13455
Q ss_pred HHHHHHhhc
Q 008093 414 VNEYLGVLH 422 (578)
Q Consensus 414 v~eFL~~~~ 422 (578)
+.+|+.+.+
T Consensus 270 ~l~~~~~~l 278 (280)
T 3i6y_A 270 HLRFHSNYL 278 (280)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHhhc
Confidence 666766544
|
| >3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=2.1e-15 Score=158.34 Aligned_cols=264 Identities=14% Similarity=0.061 Sum_probs=148.8
Q ss_pred CCeeEEEEEecCCcEEEEEEec-CCCCCC---------CccccccccCCCCCCcEEEEECCCC---CCCccHHHHHHHHH
Q 008093 118 FSYRRQLFRLSDGGMIALDWLM-GSTGPG---------DVFHANNFISKDDTTPIAIVIPGLT---SDSAASYIRHLVFN 184 (578)
Q Consensus 118 ~~y~r~~l~~~DG~~i~ldw~~-~~~~~~---------~~~~~~~~~~~~~~~PiVVllHGl~---G~s~~~yi~~l~~~ 184 (578)
+.++...+...|| +.++.+. |..... ...+.......+...|+||++||.+ |+........++..
T Consensus 62 v~~~dv~~~~~~g--l~~~~~~~P~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Pvvv~~HGGg~~~g~~~~~~~~~~~~~ 139 (365)
T 3ebl_A 62 VSSFDHIIDQSVG--LEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRR 139 (365)
T ss_dssp EEEEEEEEETTTT--EEEEEEEEC----------------CGGGGSCCBSSCCEEEEEECCSTTTSCCTTBHHHHHHHHH
T ss_pred CceeeEEecCCCC--ceEEEEeCCCccccccccccccccccccccCCCCCCcceEEEEEcCCccccCCCchhhHHHHHHH
Confidence 4556666777777 6666665 532100 0000000001234679999999953 22233222677788
Q ss_pred HHhC-CceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC------CCC-cEEEEEEchHHHHHHHHHhhcCC
Q 008093 185 TAKR-GWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY------PKA-PLFAIGTSIGANILVKYLGEEGE 256 (578)
Q Consensus 185 l~~~-Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~------~~~-~i~lvGhSmGG~ial~ya~~~p~ 256 (578)
++++ ||.|+++|+|+.+.... ....+|+.++++++.++. +.. +++++|+||||++++.++...++
T Consensus 140 la~~~g~~Vv~~dyR~~p~~~~-------~~~~~D~~~a~~~l~~~~~~~~~~d~~~ri~l~G~S~GG~la~~~a~~~~~ 212 (365)
T 3ebl_A 140 FVKLSKGVVVSVNYRRAPEHRY-------PCAYDDGWTALKWVMSQPFMRSGGDAQARVFLSGDSSGGNIAHHVAVRAAD 212 (365)
T ss_dssp HHHHHTSEEEEECCCCTTTSCT-------THHHHHHHHHHHHHHHCTTTEETTTTEEEEEEEEETHHHHHHHHHHHHHHH
T ss_pred HHHHCCCEEEEeeCCCCCCCCC-------cHHHHHHHHHHHHHHhCchhhhCCCCCCcEEEEeeCccHHHHHHHHHHHHh
Confidence 8775 99999999998764322 134689999999998542 344 89999999999999999876543
Q ss_pred C-CCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCC
Q 008093 257 K-TPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGK 335 (578)
Q Consensus 257 ~-~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g 335 (578)
. .+++++|++++.++........... . ..+. ..... ...+...+......
T Consensus 213 ~~~~~~g~vl~~p~~~~~~~~~~~~~~------~-------------~~~~----~~~~~------~~~~~~~~~~~~~~ 263 (365)
T 3ebl_A 213 EGVKVCGNILLNAMFGGTERTESERRL------D-------------GKYF----VTLQD------RDWYWKAYLPEDAD 263 (365)
T ss_dssp TTCCCCEEEEESCCCCCSSCCHHHHHH------T-------------TTSS----CCHHH------HHHHHHHHSCTTCC
T ss_pred cCCceeeEEEEccccCCCcCChhhhhc------C-------------CCcc----cCHHH------HHHHHHHhCCCCCC
Confidence 1 2699999999887654322111000 0 0000 00000 00000000000000
Q ss_pred CCCHHHHHHhCC----cccccCCCc-cceEEEEeCCCCCCCCC-CcchHHHhcCCCEEEEEeCCCCccccccccccCccc
Q 008093 336 FETVDTYYRNCS----SSTYVGNVS-IPLLCISSLDDPVCTVE-AIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMW 409 (578)
Q Consensus 336 ~~~~~~yy~~~s----~~~~l~~I~-vPvLiI~g~dDpivp~~-~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w 409 (578)
... ...+ ....+..+. .|+|+++|++|++++.. .+...+.....++++.+++++||.-++....+....
T Consensus 264 ~~~-----~~~~p~~~~~~~l~~~~~pP~Li~~G~~D~l~~~~~~~~~~L~~~g~~v~l~~~~g~~H~f~~~~~~~~~~~ 338 (365)
T 3ebl_A 264 RDH-----PACNPFGPNGRRLGGLPFAKSLIIVSGLDLTCDRQLAYADALREDGHHVKVVQCENATVGFYLLPNTVHYHE 338 (365)
T ss_dssp TTS-----TTTCTTSTTCCCCTTSCCCCEEEEEETTSTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSSCSHHHHH
T ss_pred CCC-----cccCCCCCcchhhccCCCCCEEEEEcCcccchhHHHHHHHHHHHCCCCEEEEEECCCcEEEeccCCCHHHHH
Confidence 000 0001 112333333 48999999999887643 222234456678999999999997654311122235
Q ss_pred HHHHHHHHHHhhcCC
Q 008093 410 WVRAVNEYLGVLHSS 424 (578)
Q Consensus 410 ~~~~v~eFL~~~~~~ 424 (578)
+.+.+.+||++....
T Consensus 339 ~~~~i~~Fl~~~~~~ 353 (365)
T 3ebl_A 339 VMEEISDFLNANLYY 353 (365)
T ss_dssp HHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHhhhc
Confidence 778999999987644
|
| >3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.66 E-value=4.3e-15 Score=148.00 Aligned_cols=209 Identities=12% Similarity=0.135 Sum_probs=127.9
Q ss_pred ecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHH---HHHHHhCCceEEEEeC--CCCC
Q 008093 127 LSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHL---VFNTAKRGWNVVVSNH--RGLG 201 (578)
Q Consensus 127 ~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l---~~~l~~~Gy~Vvv~D~--RG~G 201 (578)
..+|..+.++.+.|+.. .+...|+||++||.+++.. .| ... ...+.++||.|+++|+ ||+|
T Consensus 24 ~~~~~~~~~~v~~P~~~------------~~~~~p~vv~lHG~~~~~~-~~-~~~~~~~~~~~~~g~~vv~~d~~~rG~~ 89 (282)
T 3fcx_A 24 VELNCKMKFAVYLPPKA------------ETGKCPALYWLSGLTCTEQ-NF-ISKSGYHQSASEHGLVVIAPDTSPRGCN 89 (282)
T ss_dssp TTTTEEEEEEEEECGGG------------GTSCEEEEEEECCTTCCSH-HH-HHHSCCHHHHHHHTCEEEEECSCSSCCC
T ss_pred hhcCCeeEEEEEcCCCC------------CCCCCCEEEEEcCCCCCcc-ch-hhcchHHHHhhcCCeEEEEeccccCccc
Confidence 34788899888887431 1246799999999965444 44 233 5677888999999999 8877
Q ss_pred CCCCCC-------CCCCCC----------CchH-HHHHHHHHHHHHCC--CCcEEEEEEchHHHHHHHHHhhcCCCCCcc
Q 008093 202 GVSITS-------DCFYNA----------GWTE-DAREVIGYLHHEYP--KAPLFAIGTSIGANILVKYLGEEGEKTPVA 261 (578)
Q Consensus 202 ~S~~~~-------~~~~~~----------~~~~-Dl~~~i~~l~~~~~--~~~i~lvGhSmGG~ial~ya~~~p~~~~V~ 261 (578)
.+.... ...|.. .+.+ ++.++++++.+.++ ..+++++||||||.+++.++..+|+ .++
T Consensus 90 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~--~~~ 167 (282)
T 3fcx_A 90 IKGEDESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPG--KYK 167 (282)
T ss_dssp C--------CCCCCCTTCBCCSTTHHHHCBHHHHHHTHHHHHHHHHSSEEEEEEEEEEETHHHHHHHHHHHTSTT--TSS
T ss_pred cccccccccccCCcccccccCcccccchhhHHHHHHHHHHHHHHHHcCCCccceEEEEECchHHHHHHHHHhCcc--cce
Confidence 543210 011110 1112 34466777776765 3589999999999999999999998 899
Q ss_pred EEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHH
Q 008093 262 GAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDT 341 (578)
Q Consensus 262 ~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~ 341 (578)
+++++++..+....... ...+. .+..... ..+. .. +...
T Consensus 168 ~~v~~s~~~~~~~~~~~------~~~~~--------~~~~~~~------~~~~---------~~------------~~~~ 206 (282)
T 3fcx_A 168 SVSAFAPICNPVLCPWG------KKAFS--------GYLGTDQ------SKWK---------AY------------DATH 206 (282)
T ss_dssp CEEEESCCCCGGGSHHH------HHHHH--------HHHC---------CCGG---------GG------------CHHH
T ss_pred EEEEeCCccCcccCchh------HHHHH--------HhcCCch------hhhh---------hc------------CHHH
Confidence 99999987765432100 01111 1100000 0000 00 0000
Q ss_pred HHHhCCcccccCCCccceEEEEeCCCCCCCCCCc-----chHHHhcCCCEEEEEeCCCCccc
Q 008093 342 YYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAI-----PWDECRANKNVVLATTWHGGHLA 398 (578)
Q Consensus 342 yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~-----~~~~~~~~~~~~l~~~~~GGH~~ 398 (578)
....+.++++|+|+++|++|+++|.... ...+.....++++.+++++||.-
T Consensus 207 ------~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~ 262 (282)
T 3fcx_A 207 ------LVKSYPGSQLDILIDQGKDDQFLLDGQLLPDNFIAACTEKKIPVVFRLQEDYDHSY 262 (282)
T ss_dssp ------HHTTCC---CCEEEEEETTCHHHHTTSSCHHHHHHHHHHTTCCEEEEEETTCCSSH
T ss_pred ------HHHhcccCCCcEEEEcCCCCcccccchhhHHHHHHHHHHcCCceEEEECCCCCcCH
Confidence 1123456689999999999999965531 22344566789999999999953
|
| >1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.66 E-value=2.1e-15 Score=172.76 Aligned_cols=228 Identities=11% Similarity=-0.017 Sum_probs=132.8
Q ss_pred HHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH----------------CCCCcEEEEEEchHH
Q 008093 181 LVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHE----------------YPKAPLFAIGTSIGA 244 (578)
Q Consensus 181 l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~----------------~~~~~i~lvGhSmGG 244 (578)
+...++++||.|+++|+||+|+|++.. ..+.....+|+.++++++..+ ..+.++.++|+||||
T Consensus 273 ~~~~la~~GYaVv~~D~RG~G~S~G~~-~~~~~~e~~D~~a~IdwL~~~~~~~~d~~~~~~v~q~~~~grVgl~G~SyGG 351 (763)
T 1lns_A 273 LNDYFLTRGFASIYVAGVGTRSSDGFQ-TSGDYQQIYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSYLG 351 (763)
T ss_dssp HHHHHHTTTCEEEEECCTTSTTSCSCC-CTTSHHHHHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETHHH
T ss_pred hHHHHHHCCCEEEEECCCcCCCCCCcC-CCCCHHHHHHHHHHHHHHhhcccccccccccccccccCCCCcEEEEEECHHH
Confidence 457788999999999999999998653 222234568999999999742 123589999999999
Q ss_pred HHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHH-----HhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhcc
Q 008093 245 NILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRF-----IGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKS 319 (578)
Q Consensus 245 ~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~-----l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~ 319 (578)
.+++.+|+.+++ .++++|.+++..+....... .................+...... ... ....... .
T Consensus 352 ~ial~~Aa~~p~--~lkaiV~~~~~~d~~~~~~~~g~~~~~~g~~~~~~~~l~~~~~~~~~~~--g~~---~~~~~~~-~ 423 (763)
T 1lns_A 352 TMAYGAATTGVE--GLELILAEAGISSWYNYYRENGLVRSPGGFPGEDLDVLAALTYSRNLDG--ADF---LKGNAEY-E 423 (763)
T ss_dssp HHHHHHHTTTCT--TEEEEEEESCCSBHHHHHBSSSSBCCCTTCTTCCHHHHHHHHCGGGGSH--HHH---HHHHHHH-H
T ss_pred HHHHHHHHhCCc--ccEEEEEecccccHHHHhhhcchhhhcccCCchhhhHHhHHHHhhhcCc--chh---hhHHHHH-H
Confidence 999999999887 79999999887653221000 000000000000000000000000 000 0000000 0
Q ss_pred CCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhc--CCCEEEEEeCCCCcc
Q 008093 320 RSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRA--NKNVVLATTWHGGHL 397 (578)
Q Consensus 320 ~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~--~~~~~l~~~~~GGH~ 397 (578)
..+..+..... .......++|+..+....+++|++|+|+++|.+|.++|........... .....+ ++.++||.
T Consensus 424 ~~~~~~~~~~~---~~~~~~~~~w~~~s~~~~l~~I~~PvLii~G~~D~~vp~~~a~~l~~al~~~~~~~l-~i~~~gH~ 499 (763)
T 1lns_A 424 KRLAEMTAALD---RKSGDYNQFWHDRNYLINTDKVKADVLIVHGLQDWNVTPEQAYNFWKALPEGHAKHA-FLHRGAHI 499 (763)
T ss_dssp HHHHHHHHHHC---TTTCCCCHHHHTTBGGGGGGGCCSEEEEEEETTCCSSCTHHHHHHHHHSCTTCCEEE-EEESCSSC
T ss_pred HHHHHHHhhhh---hccCchhHHhhccChhhHhhcCCCCEEEEEECCCCCCChHHHHHHHHhhccCCCeEE-EEeCCccc
Confidence 00011110000 0111224677777777889999999999999999999876443322222 223444 45678998
Q ss_pred ccccccccCcccHHHHHHHHHHhhcCC
Q 008093 398 AFFEGLTAAGMWWVRAVNEYLGVLHSS 424 (578)
Q Consensus 398 ~~~eg~~~~~~w~~~~v~eFL~~~~~~ 424 (578)
.+.+. ....+.+.+.+||+..+..
T Consensus 500 ~~~~~---~~~~~~~~i~~Ffd~~Lkg 523 (763)
T 1lns_A 500 YMNSW---QSIDFSETINAYFVAKLLD 523 (763)
T ss_dssp CCTTB---SSCCHHHHHHHHHHHHHTT
T ss_pred Ccccc---chHHHHHHHHHHHHHHhcC
Confidence 75541 2234788999999987653
|
| >3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.9e-15 Score=150.91 Aligned_cols=102 Identities=20% Similarity=0.117 Sum_probs=74.4
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEE
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFA 237 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~l 237 (578)
..++.||++||++| +...| ..++. + ..+|+|+++|+||+|.++... ....+.+.++++.+....+..++++
T Consensus 19 ~~~~~lv~lhg~~~-~~~~~-~~~~~-l-~~~~~v~~~d~~G~~~~~~~~-----~~~~~~~~~~~~~i~~~~~~~~~~l 89 (265)
T 3ils_A 19 VARKTLFMLPDGGG-SAFSY-ASLPR-L-KSDTAVVGLNCPYARDPENMN-----CTHGAMIESFCNEIRRRQPRGPYHL 89 (265)
T ss_dssp TSSEEEEEECCTTC-CGGGG-TTSCC-C-SSSEEEEEEECTTTTCGGGCC-----CCHHHHHHHHHHHHHHHCSSCCEEE
T ss_pred CCCCEEEEECCCCC-CHHHH-HHHHh-c-CCCCEEEEEECCCCCCCCCCC-----CCHHHHHHHHHHHHHHhCCCCCEEE
Confidence 45678999999965 45456 56666 5 678999999999997654221 2233334445555555555669999
Q ss_pred EEEchHHHHHHHHHh---hcCCCCCccEEEEEcCCc
Q 008093 238 IGTSIGANILVKYLG---EEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 238 vGhSmGG~ial~ya~---~~p~~~~V~~~Vlis~p~ 270 (578)
+||||||.+++.++. +.+. ++.++|+++++.
T Consensus 90 ~GhS~Gg~ia~~~a~~l~~~~~--~v~~lvl~~~~~ 123 (265)
T 3ils_A 90 GGWSSGGAFAYVVAEALVNQGE--EVHSLIIIDAPI 123 (265)
T ss_dssp EEETHHHHHHHHHHHHHHHTTC--CEEEEEEESCCS
T ss_pred EEECHhHHHHHHHHHHHHhCCC--CceEEEEEcCCC
Confidence 999999999999988 5565 799999998754
|
| >2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A | Back alignment and structure |
|---|
Probab=99.65 E-value=1.6e-16 Score=155.66 Aligned_cols=214 Identities=16% Similarity=0.175 Sum_probs=119.4
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCC---CCc
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYP---KAP 234 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~---~~~ 234 (578)
..++.||++||++| +...| +.++..|.+ +|+|+++|+||||.|... ..+|+.++++.+.+... ..+
T Consensus 11 ~~~~~lv~lhg~g~-~~~~~-~~~~~~L~~-~~~vi~~Dl~GhG~S~~~--------~~~~~~~~~~~~~~~l~~~~~~~ 79 (242)
T 2k2q_B 11 SEKTQLICFPFAGG-YSASF-RPLHAFLQG-ECEMLAAEPPGHGTNQTS--------AIEDLEELTDLYKQELNLRPDRP 79 (242)
T ss_dssp TCCCEEESSCCCCH-HHHHH-HHHHHHHCC-SCCCEEEECCSSCCSCCC--------TTTHHHHHHHHTTTTCCCCCCSS
T ss_pred CCCceEEEECCCCC-CHHHH-HHHHHhCCC-CeEEEEEeCCCCCCCCCC--------CcCCHHHHHHHHHHHHHhhcCCC
Confidence 45677999999955 44455 778888764 799999999999998532 23577777776654432 358
Q ss_pred EEEEEEchHHHHHHHHHhh------cCCCCCccEEEEEc--CCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhccc
Q 008093 235 LFAIGTSIGANILVKYLGE------EGEKTPVAGAAAIC--SPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPR 306 (578)
Q Consensus 235 i~lvGhSmGG~ial~ya~~------~p~~~~V~~~Vlis--~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~ 306 (578)
++++||||||.+++.+|.+ +++ . +++.+ ++............ ..+.. ..... ..
T Consensus 80 ~~lvGhSmGG~iA~~~A~~~~~~~~~p~--~---v~l~~~~~~~~~~~~~~~~~~---~~~~~--------~~~~~--~~ 141 (242)
T 2k2q_B 80 FVLFGHSMGGMITFRLAQKLEREGIFPQ--A---VIISAIQPPHIQRKKVSHLPD---DQFLD--------HIIQL--GG 141 (242)
T ss_dssp CEEECCSSCCHHHHHHHHHHHHHHCSSC--S---EEEEEEECSCCCSCCCSSCTT---HHHHH--------TTCCT--TC
T ss_pred EEEEeCCHhHHHHHHHHHHHHHcCCCCC--E---EEEECCCCCCCCcccccCCCH---HHHHH--------HHHHh--CC
Confidence 9999999999999999976 344 2 22222 12110000000000 00000 00000 00
Q ss_pred ccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhC-C-cccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCC
Q 008093 307 YSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNC-S-SSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANK 384 (578)
Q Consensus 307 l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~-s-~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~ 384 (578)
..... ... .+.... -.......+... . ....+.+|++|+|+|+|++|++++.. .. ......+
T Consensus 142 ~~~~~-~~~-------~~~~~~------~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~-~~-~~~~~~~ 205 (242)
T 2k2q_B 142 MPAEL-VEN-------KEVMSF------FLPSFRSDYRALEQFELYDLAQIQSPVHVFNGLDDKKCIRD-AE-GWKKWAK 205 (242)
T ss_dssp CCCTT-THH-------HHTTTT------CCSCHHHHHHHHTCCCCSCCTTCCCSEEEEEECSSCCHHHH-HH-HHHTTCC
T ss_pred CChHH-hcC-------HHHHHH------HHHHHHHHHHHHHhcccCCCCccCCCEEEEeeCCCCcCHHH-HH-HHHHHhc
Confidence 00000 000 000000 001111111111 1 11227789999999999999986532 11 1233455
Q ss_pred CEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 385 NVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 385 ~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
+..+.+++ |||+.+.|. + ..+.+.|.+||++.
T Consensus 206 ~~~~~~~~-~gH~~~~e~--p--~~~~~~i~~fl~~~ 237 (242)
T 2k2q_B 206 DITFHQFD-GGHMFLLSQ--T--EEVAERIFAILNQH 237 (242)
T ss_dssp CSEEEEEE-CCCSHHHHH--C--HHHHHHHHHHHHTT
T ss_pred CCeEEEEe-CCceeEcCC--H--HHHHHHHHHHhhcc
Confidence 66677776 699998883 3 35889999999753
|
| >2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.65 E-value=2.8e-15 Score=150.45 Aligned_cols=256 Identities=10% Similarity=0.006 Sum_probs=139.6
Q ss_pred EEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCC--CCCccHHHHHHHHHHHhCCceEEEEeCCCC
Q 008093 123 QLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLT--SDSAASYIRHLVFNTAKRGWNVVVSNHRGL 200 (578)
Q Consensus 123 ~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~--G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~ 200 (578)
..++..+|..+ +++.+.. ...|+||++||.+ .++.+.+...+...+.+.||+|+++|||+.
T Consensus 7 ~~~~~~~~~~~--~~y~p~~---------------~~~p~iv~~HGGg~~~g~~~~~~~~~~~~l~~~g~~Vi~vdYrla 69 (274)
T 2qru_A 7 NNQTLANGATV--TIYPTTT---------------EPTNYVVYLHGGGMIYGTKSDLPEELKELFTSNGYTVLALDYLLA 69 (274)
T ss_dssp EEEECTTSCEE--EEECCSS---------------SSCEEEEEECCSTTTSCCGGGCCHHHHHHHHTTTEEEEEECCCCT
T ss_pred ccccccCCeeE--EEEcCCC---------------CCCcEEEEEeCccccCCChhhchHHHHHHHHHCCCEEEEeCCCCC
Confidence 45667777655 5565421 3568999999975 123332224466677888999999999986
Q ss_pred CCCCCCCCCCCCCCchHHHHHHHHHHHHHCC-CCcEEEEEEchHHHHHHHHHhh---cCCCCCccEEEEEcCCcchhhhh
Q 008093 201 GGVSITSDCFYNAGWTEDAREVIGYLHHEYP-KAPLFAIGTSIGANILVKYLGE---EGEKTPVAGAAAICSPWDLLIGD 276 (578)
Q Consensus 201 G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~-~~~i~lvGhSmGG~ial~ya~~---~p~~~~V~~~Vlis~p~d~~~~~ 276 (578)
+..+ + ....+|+.++++++.+... ..+++++|+|+||++++.++.. .+. .+++++++++..+.....
T Consensus 70 Pe~~------~-p~~~~D~~~al~~l~~~~~~~~~i~l~G~SaGG~lA~~~a~~~~~~~~--~~~~~vl~~~~~~~~~~~ 140 (274)
T 2qru_A 70 PNTK------I-DHILRTLTETFQLLNEEIIQNQSFGLCGRSAGGYLMLQLTKQLQTLNL--TPQFLVNFYGYTDLEFIK 140 (274)
T ss_dssp TTSC------H-HHHHHHHHHHHHHHHHHTTTTCCEEEEEETHHHHHHHHHHHHHHHTTC--CCSCEEEESCCSCSGGGG
T ss_pred CCCC------C-cHHHHHHHHHHHHHHhccccCCcEEEEEECHHHHHHHHHHHHHhcCCC--CceEEEEEcccccccccC
Confidence 5321 1 1346899999999987764 5689999999999999998872 344 688999888766521110
Q ss_pred HHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCC--HHH---HhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccc
Q 008093 277 RFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLAN--WEG---IKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTY 351 (578)
Q Consensus 277 ~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d--~~~---i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~ 351 (578)
....... ..... ..+.... ...+....... ... ...... +. .+... ........ .......
T Consensus 141 ~~~~~~~--~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~-~~~~~~~~---~~~~~~~ 206 (274)
T 2qru_A 141 EPRKLLK--QAISA---KEIAAID-QTKPVWDDPFLSRYLLYHYSIQQAL---LP-HFYGL-PENGDWSA---YALSDET 206 (274)
T ss_dssp SCCCSCS--SCCCS---GGGTTSC-CSSCCSCCTTCTTHHHHHHHHHTTC---HH-HHHTC-CTTSCCGG---GCCCHHH
T ss_pred Cchhhcc--ccccH---HHHhhhc-ccCCCCCCccccchhhhhhhhhhcc---hh-hccCc-cccccccc---CCCChhh
Confidence 0000000 00000 0000000 00000000000 000 000000 00 00000 00000000 0000113
Q ss_pred cCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHh
Q 008093 352 VGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 352 l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
+.++ .|+|+++|++|++++..... .+.+..+++++.++++++|....+...+....+.+.+.+||++
T Consensus 207 l~~l-pP~li~~G~~D~~~~~~~~~-~l~~~~~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~fl~~ 273 (274)
T 2qru_A 207 LKTF-PPCFSTASSSDEEVPFRYSK-KIGRTIPESTFKAVYYLEHDFLKQTKDPSVITLFEQLDSWLKE 273 (274)
T ss_dssp HHTS-CCEEEEEETTCSSSCTHHHH-HHHHHSTTCEEEEECSCCSCGGGGTTSHHHHHHHHHHHHHHHT
T ss_pred hcCC-CCEEEEEecCCCCcCHHHHH-HHHHhCCCcEEEEcCCCCcCCccCcCCHHHHHHHHHHHHHHhh
Confidence 4556 79999999999998765332 2455667889999999999865553222222356778888864
|
| >3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.65 E-value=6.4e-15 Score=143.21 Aligned_cols=185 Identities=12% Similarity=0.039 Sum_probs=121.2
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhC-----CceEEEEeCCCCCCCCCC--------------CCCCCC----CC
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKR-----GWNVVVSNHRGLGGVSIT--------------SDCFYN----AG 214 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~-----Gy~Vvv~D~RG~G~S~~~--------------~~~~~~----~~ 214 (578)
+..|+||++||+++ +...| ..++..+.++ ||+|+++|.++++.+... ...... ..
T Consensus 21 ~~~p~vv~lHG~g~-~~~~~-~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 98 (239)
T 3u0v_A 21 RHSASLIFLHGSGD-SGQGL-RMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKITNDCPEHLESIDV 98 (239)
T ss_dssp CCCEEEEEECCTTC-CHHHH-HHHHHHHHTSCCCCSSEEEEEECCCEEECGGGTTCEEECSSCCSSSSSSSCCCHHHHHH
T ss_pred CCCcEEEEEecCCC-chhhH-HHHHHHHhhcccCCCceEEEeCCCCccccccCCCCccccceeccCCCcccccchhhHHH
Confidence 56799999999954 55445 5677777764 699999998754211100 000000 01
Q ss_pred chHHHHHHHHHHHHH-CCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHH
Q 008093 215 WTEDAREVIGYLHHE-YPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALT 293 (578)
Q Consensus 215 ~~~Dl~~~i~~l~~~-~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~ 293 (578)
..+|+.++++.+.+. .+..+++++||||||.+++.++.++++ +++++|++++..+..... +..
T Consensus 99 ~~~~l~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~--~~~~~v~~~~~~~~~~~~-----------~~~--- 162 (239)
T 3u0v_A 99 MCQVLTDLIDEEVKSGIKKNRILIGGFSMGGCMAMHLAYRNHQ--DVAGVFALSSFLNKASAV-----------YQA--- 162 (239)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHHCT--TSSEEEEESCCCCTTCHH-----------HHH---
T ss_pred HHHHHHHHHHHHHHhCCCcccEEEEEEChhhHHHHHHHHhCcc--ccceEEEecCCCCchhHH-----------HHH---
Confidence 123444555444322 245789999999999999999999998 899999998876542110 000
Q ss_pred HhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccc-eEEEEeCCCCCCCC
Q 008093 294 IGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIP-LLCISSLDDPVCTV 372 (578)
Q Consensus 294 ~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vP-vLiI~g~dDpivp~ 372 (578)
+ ......+| +|+++|++|+++|.
T Consensus 163 -------------------------------~-------------------------~~~~~~~pp~li~~G~~D~~v~~ 186 (239)
T 3u0v_A 163 -------------------------------L-------------------------QKSNGVLPELFQCHGTADELVLH 186 (239)
T ss_dssp -------------------------------H-------------------------HHCCSCCCCEEEEEETTCSSSCH
T ss_pred -------------------------------H-------------------------HhhccCCCCEEEEeeCCCCccCH
Confidence 0 01123456 99999999999997
Q ss_pred CCcch---HHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcCC
Q 008093 373 EAIPW---DECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSS 424 (578)
Q Consensus 373 ~~~~~---~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~~ 424 (578)
+.... .......++++.+++++||....+ ..+.+.+||++....
T Consensus 187 ~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~--------~~~~~~~~l~~~l~~ 233 (239)
T 3u0v_A 187 SWAEETNSMLKSLGVTTKFHSFPNVYHELSKT--------ELDILKLWILTKLPG 233 (239)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEETTCCSSCCHH--------HHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHcCCcEEEEEeCCCCCcCCHH--------HHHHHHHHHHHhCCC
Confidence 53322 233445679999999999976532 567888999887643
|
| >3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.65 E-value=8.6e-16 Score=157.86 Aligned_cols=246 Identities=11% Similarity=-0.041 Sum_probs=150.0
Q ss_pred CCCCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCC--CCCccHHHHHHHHHHH-hCCceE
Q 008093 116 PCFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLT--SDSAASYIRHLVFNTA-KRGWNV 192 (578)
Q Consensus 116 ~~~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~--G~s~~~yi~~l~~~l~-~~Gy~V 192 (578)
+.+..+...+...||..+.++++.|.. ...|+||++||.+ .++...| ..++..++ +.||.|
T Consensus 56 ~~~~~~~~~i~~~~G~~i~~~~~~P~~---------------~~~p~vv~~HGgG~~~g~~~~~-~~~~~~la~~~g~~v 119 (317)
T 3qh4_A 56 AGVAVADDVVTGEAGRPVPVRIYRAAP---------------TPAPVVVYCHAGGFALGNLDTD-HRQCLELARRARCAV 119 (317)
T ss_dssp HCCEEEEEEEECTTSCEEEEEEEECSC---------------SSEEEEEEECCSTTTSCCTTTT-HHHHHHHHHHHTSEE
T ss_pred CcceEEEEEecCCCCCeEEEEEEecCC---------------CCCcEEEEECCCcCccCChHHH-HHHHHHHHHHcCCEE
Confidence 356778888899999899999987632 4578999999753 2344445 45666666 569999
Q ss_pred EEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH-----CCCCcEEEEEEchHHHHHHHHHhhcCC--CCCccEEEE
Q 008093 193 VVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHE-----YPKAPLFAIGTSIGANILVKYLGEEGE--KTPVAGAAA 265 (578)
Q Consensus 193 vv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~-----~~~~~i~lvGhSmGG~ial~ya~~~p~--~~~V~~~Vl 265 (578)
+++|+|+.+.... ....+|+.++++++.+. .+..+++++|+|+||++++.++...++ ...++++++
T Consensus 120 v~~dyr~~p~~~~-------p~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl 192 (317)
T 3qh4_A 120 VSVDYRLAPEHPY-------PAALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIFQLL 192 (317)
T ss_dssp EEECCCCTTTSCT-------THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSCCCCEEEE
T ss_pred EEecCCCCCCCCC-------chHHHHHHHHHHHHHhhHHhhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCeeEEEE
Confidence 9999998775432 23468999999998874 234589999999999999999876543 225899999
Q ss_pred EcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHh
Q 008093 266 ICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRN 345 (578)
Q Consensus 266 is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~ 345 (578)
+++..+.... ...... . ..+. ..... ...+...+..... .. ..
T Consensus 193 ~~p~~~~~~~-~~~~~~------~-------------~~~~----~~~~~------~~~~~~~~~~~~~-~~------~~ 235 (317)
T 3qh4_A 193 HQPVLDDRPT-ASRSEF------R-------------ATPA----FDGEA------ASLMWRHYLAGQT-PS------PE 235 (317)
T ss_dssp ESCCCCSSCC-HHHHHT------T-------------TCSS----SCHHH------HHHHHHHHHTTCC-CC------TT
T ss_pred ECceecCCCC-cCHHHh------c-------------CCCC----cCHHH------HHHHHHHhcCCCC-CC------cc
Confidence 9988776411 100000 0 0000 00000 0000000000000 00 00
Q ss_pred CCcc--cccCCCccceEEEEeCCCCCCCCC-CcchHHHhcCCCEEEEEeCCCCccccccc-cccCcccHHHHHHHHHHhh
Q 008093 346 CSSS--TYVGNVSIPLLCISSLDDPVCTVE-AIPWDECRANKNVVLATTWHGGHLAFFEG-LTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 346 ~s~~--~~l~~I~vPvLiI~g~dDpivp~~-~~~~~~~~~~~~~~l~~~~~GGH~~~~eg-~~~~~~w~~~~v~eFL~~~ 421 (578)
.++. ..+.. -.|+|+++|++|++++.. .....+.....++++.++++++|.-.... ..+....+.+.+.+||++.
T Consensus 236 ~~p~~~~~l~~-lpP~li~~G~~D~~~~~~~~~a~~l~~~g~~~~l~~~~g~~H~f~~~~~~~~~~~~~~~~~~~~l~~~ 314 (317)
T 3qh4_A 236 SVPGRRGQLAG-LPATLITCGEIDPFRDEVLDYAQRLLGAGVSTELHIFPRACHGFDSLLPEWTTSQRLFAMQGHALADA 314 (317)
T ss_dssp TCGGGCSCCTT-CCCEEEEEEEESTTHHHHHHHHHHHHHTTCCEEEEEEEEEETTHHHHCTTSHHHHHHHHHHHHHHHHH
T ss_pred cCCCcccccCC-CCceeEEecCcCCCchhHHHHHHHHHHcCCCEEEEEeCCCccchhhhcCCchHHHHHHHHHHHHHHHH
Confidence 0010 11111 239999999999998722 12223455677899999999999643221 1112235778889998875
Q ss_pred c
Q 008093 422 H 422 (578)
Q Consensus 422 ~ 422 (578)
+
T Consensus 315 l 315 (317)
T 3qh4_A 315 F 315 (317)
T ss_dssp H
T ss_pred h
Confidence 4
|
| >3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A | Back alignment and structure |
|---|
Probab=99.63 E-value=9.1e-15 Score=153.98 Aligned_cols=206 Identities=18% Similarity=0.173 Sum_probs=139.1
Q ss_pred CeeEEEEEec-CCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHH----------HHHHHh
Q 008093 119 SYRRQLFRLS-DGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHL----------VFNTAK 187 (578)
Q Consensus 119 ~y~r~~l~~~-DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l----------~~~l~~ 187 (578)
.++...+... ||..+.+..+.|... ......|+||++||.+++....+...+ ......
T Consensus 143 ~~~~~~~~~~~dg~~l~~~v~~P~~~-----------~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~g~~~~~~~~~~~~ 211 (380)
T 3doh_A 143 DFLAFTFKDPETGVEIPYRLFVPKDV-----------NPDRKYPLVVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVV 211 (380)
T ss_dssp GEEEEEEECTTTCCEEEEEEECCSSC-----------CTTSCEEEEEEECCGGGCSSSSSHHHHSSTTTTGGGSHHHHTT
T ss_pred cccceeeccCCCCcEEEEEEEcCCCC-----------CCCCCccEEEEECCCCCCCCchhhhhhccccceeecCcccccc
Confidence 4566677788 999999988877431 113456999999998654333221111 122345
Q ss_pred CCceEEEEeCCCCCCCCCCCC----CCCCCCchHHHHHHHHHHHHHCCC--CcEEEEEEchHHHHHHHHHhhcCCCCCcc
Q 008093 188 RGWNVVVSNHRGLGGVSITSD----CFYNAGWTEDAREVIGYLHHEYPK--APLFAIGTSIGANILVKYLGEEGEKTPVA 261 (578)
Q Consensus 188 ~Gy~Vvv~D~RG~G~S~~~~~----~~~~~~~~~Dl~~~i~~l~~~~~~--~~i~lvGhSmGG~ial~ya~~~p~~~~V~ 261 (578)
.|+.|+++|+||.+....... ........+|+.++++++.++++. .+++++||||||.+++.++..+++ .++
T Consensus 212 ~~~~vv~pd~~g~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~--~~~ 289 (380)
T 3doh_A 212 HPCFVLAPQCPPNSSWSTLFTDRENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPE--LFA 289 (380)
T ss_dssp SCCEEEEECCCTTCCSBTTTTCSSCTTSBCHHHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTT--TCS
T ss_pred CCEEEEEecCCCCCcccccccccccccCCcchHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHHhCCc--cce
Confidence 688999999998765422100 111123457888889998888763 379999999999999999999988 899
Q ss_pred EEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHH
Q 008093 262 GAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDT 341 (578)
Q Consensus 262 ~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~ 341 (578)
+++++++..+.
T Consensus 290 ~~v~~sg~~~~--------------------------------------------------------------------- 300 (380)
T 3doh_A 290 AAIPICGGGDV--------------------------------------------------------------------- 300 (380)
T ss_dssp EEEEESCCCCG---------------------------------------------------------------------
T ss_pred EEEEecCCCCh---------------------------------------------------------------------
Confidence 99999876410
Q ss_pred HHHhCCcccccCCC-ccceEEEEeCCCCCCCCCCcch---HHHhcCCCEEEEEeCCC--------CccccccccccCccc
Q 008093 342 YYRNCSSSTYVGNV-SIPLLCISSLDDPVCTVEAIPW---DECRANKNVVLATTWHG--------GHLAFFEGLTAAGMW 409 (578)
Q Consensus 342 yy~~~s~~~~l~~I-~vPvLiI~g~dDpivp~~~~~~---~~~~~~~~~~l~~~~~G--------GH~~~~eg~~~~~~w 409 (578)
..+.++ .+|+|+++|++|+++|.+.... .+.....++++.+++++ ||..+.+. +
T Consensus 301 --------~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~h~~h~~~~H~~~~~~------~ 366 (380)
T 3doh_A 301 --------SKVERIKDIPIWVFHAEDDPVVPVENSRVLVKKLAEIGGKVRYTEYEKGFMEKHGWDPHGSWIPT------Y 366 (380)
T ss_dssp --------GGGGGGTTSCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCEEEEEECTTHHHHTTCCTTCTHHHH------H
T ss_pred --------hhhhhccCCCEEEEecCCCCccCHHHHHHHHHHHHHCCCceEEEEecCCcccCCCCCCchhHHHh------c
Confidence 011222 3899999999999999764332 23445667999999999 55433321 1
Q ss_pred HHHHHHHHHHh
Q 008093 410 WVRAVNEYLGV 420 (578)
Q Consensus 410 ~~~~v~eFL~~ 420 (578)
-.+.+.+||.+
T Consensus 367 ~~~~i~~wL~~ 377 (380)
T 3doh_A 367 ENQEAIEWLFE 377 (380)
T ss_dssp TCHHHHHHHHT
T ss_pred CCHHHHHHHHh
Confidence 12377888875
|
| >3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.63 E-value=5.4e-16 Score=154.36 Aligned_cols=196 Identities=17% Similarity=0.208 Sum_probs=129.1
Q ss_pred cEEEEECCCCCCCccHHHHHHHHHHHhCC---ceEEEEeCCCCCCCC--CC----CCCC-----CC---C------CchH
Q 008093 161 PIAIVIPGLTSDSAASYIRHLVFNTAKRG---WNVVVSNHRGLGGVS--IT----SDCF-----YN---A------GWTE 217 (578)
Q Consensus 161 PiVVllHGl~G~s~~~yi~~l~~~l~~~G---y~Vvv~D~RG~G~S~--~~----~~~~-----~~---~------~~~~ 217 (578)
++|||+||++| +...| ..++..|.+.| ++|+++|.+++|.+. +. .... +. . .+.+
T Consensus 5 ~pvv~iHG~~~-~~~~~-~~~~~~L~~~~~~~~~vi~~~v~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~a~ 82 (250)
T 3lp5_A 5 APVIMVPGSSA-SQNRF-DSLITELGKETPKKHSVLKLTVQTDGTIKYSGSIAANDNEPFIVIGFANNRDGKANIDKQAV 82 (250)
T ss_dssp CCEEEECCCGG-GHHHH-HHHHHHHHHHSSSCCCEEEEEECTTSCEEEEECCCTTCSSCEEEEEESCCCCSHHHHHHHHH
T ss_pred CCEEEECCCCC-CHHHH-HHHHHHHHhcCCCCceEEEEEEecCCeEEEeeecCCCCcCCeEEEEeccCCCcccCHHHHHH
Confidence 34889999965 55556 78999999876 799998888887631 11 0000 00 1 2347
Q ss_pred HHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCC---CCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHH
Q 008093 218 DAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGE---KTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTI 294 (578)
Q Consensus 218 Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~---~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~ 294 (578)
|+.++++.+.++++..++++|||||||.+++.|+..++. ..+|.++|++++|++.......
T Consensus 83 ~l~~~~~~l~~~~~~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~g~~~~~~---------------- 146 (250)
T 3lp5_A 83 WLNTAFKALVKTYHFNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMESTSTT---------------- 146 (250)
T ss_dssp HHHHHHHHHHTTSCCSEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTTTTCCCSS----------------
T ss_pred HHHHHHHHHHHHcCCCCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCCccccccc----------------
Confidence 899999999999988999999999999999999988732 1279999999999876421100
Q ss_pred hHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeC----CCCCC
Q 008093 295 GLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSL----DDPVC 370 (578)
Q Consensus 295 ~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~----dDpiv 370 (578)
..+ ..+. ++.. ....+++ ++|+|+|+|. +|.+|
T Consensus 147 ------------------------~~~-~~~~--------------~l~~---~~~~lp~-~vpvl~I~G~~~~~~Dg~V 183 (250)
T 3lp5_A 147 ------------------------AKT-SMFK--------------ELYR---YRTGLPE-SLTVYSIAGTENYTSDGTV 183 (250)
T ss_dssp ------------------------CCC-HHHH--------------HHHH---TGGGSCT-TCEEEEEECCCCCCTTTBC
T ss_pred ------------------------ccC-HHHH--------------HHHh---ccccCCC-CceEEEEEecCCCCCCcee
Confidence 000 0000 0000 1123333 7999999999 99999
Q ss_pred CCCCcchHHHh--c-CCCEEEEEe--CCCCccccccccccCcccHHHHHHHHHHhhc
Q 008093 371 TVEAIPWDECR--A-NKNVVLATT--WHGGHLAFFEGLTAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 371 p~~~~~~~~~~--~-~~~~~l~~~--~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~ 422 (578)
|.+........ . ........+ ++++|..+.+. + .+.+.|.+||....
T Consensus 184 p~~sa~~l~~l~~~~~~~~~~~~v~g~~a~H~~l~e~--~---~v~~~I~~FL~~~~ 235 (250)
T 3lp5_A 184 PYNSVNYGKYIFQDQVKHFTEITVTGANTAHSDLPQN--K---QIVSLIRQYLLAET 235 (250)
T ss_dssp CHHHHTTHHHHHTTTSSEEEEEECTTTTBSSCCHHHH--H---HHHHHHHHHTSCCC
T ss_pred eHHHHHHHHHHhcccccceEEEEEeCCCCchhcchhC--H---HHHHHHHHHHhccc
Confidence 98744331111 1 112222333 45789999983 2 48899999987543
|
| >3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.63 E-value=3.3e-15 Score=148.63 Aligned_cols=208 Identities=14% Similarity=0.109 Sum_probs=134.1
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCc--eEEEEeCCCCCCCCCCC--------CC---CCC----C---CchHH
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGW--NVVVSNHRGLGGVSITS--------DC---FYN----A---GWTED 218 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy--~Vvv~D~RG~G~S~~~~--------~~---~~~----~---~~~~D 218 (578)
+.++|||+||++| +...| +.++..|.+.|| +|+++|.+++|.+.... +- .+. . .+.++
T Consensus 5 ~~~pvvliHG~~~-~~~~~-~~l~~~L~~~g~~~~vi~~dv~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~~ 82 (249)
T 3fle_A 5 KTTATLFLHGYGG-SERSE-TFMVKQALNKNVTNEVITARVSSEGKVYFDKKLSEDAANPIVKVEFKDNKNGNFKENAYW 82 (249)
T ss_dssp CCEEEEEECCTTC-CGGGT-HHHHHHHHTTTSCSCEEEEEECSSCCEEESSCCC--CCSCEEEEEESSTTCCCHHHHHHH
T ss_pred CCCcEEEECCCCC-ChhHH-HHHHHHHHHcCCCceEEEEEECCCCCEEEccccccccCCCeEEEEcCCCCCccHHHHHHH
Confidence 4456889999965 55556 789999999986 79999999998753211 10 000 1 13578
Q ss_pred HHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCC---CCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHh
Q 008093 219 AREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEK---TPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIG 295 (578)
Q Consensus 219 l~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~---~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~ 295 (578)
+.++++.+.++++..++.+|||||||.+++.|+.+++.. .+|+.+|++++|++....... .
T Consensus 83 l~~~i~~l~~~~~~~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~---~------------- 146 (249)
T 3fle_A 83 IKEVLSQLKSQFGIQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNGILNMNE---N------------- 146 (249)
T ss_dssp HHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTCCTTTSS---C-------------
T ss_pred HHHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCCcccccC---C-------------
Confidence 899999999998888999999999999999999998742 269999999999876422000 0
Q ss_pred HHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCC-CCHHHHHHhC-CcccccCCCccceEEEEeC------CC
Q 008093 296 LQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKF-ETVDTYYRNC-SSSTYVGNVSIPLLCISSL------DD 367 (578)
Q Consensus 296 l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~-~~~~~yy~~~-s~~~~l~~I~vPvLiI~g~------dD 367 (578)
+.... ... .+- ......|+.. .....+++.++|+|.|+|. .|
T Consensus 147 ---------~~~~~-~~~--------------------~g~p~~~~~~~~~l~~~~~~~p~~~~~vl~I~G~~~~~~~sD 196 (249)
T 3fle_A 147 ---------VNEII-VDK--------------------QGKPSRMNAAYRQLLSLYKIYCGKEIEVLNIYGDLEDGSHSD 196 (249)
T ss_dssp ---------TTTSC-BCT--------------------TCCBSSCCHHHHHTGGGHHHHTTTTCEEEEEEEECCSSSCBS
T ss_pred ---------cchhh-hcc--------------------cCCCcccCHHHHHHHHHHhhCCccCCeEEEEeccCCCCCCCC
Confidence 00000 000 000 0000111111 1234566678999999998 68
Q ss_pred CCCCCCCcch--HHHh-cCCCEEEEEe--CCCCccccccccccCcccHHHHHHHHHH
Q 008093 368 PVCTVEAIPW--DECR-ANKNVVLATT--WHGGHLAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 368 pivp~~~~~~--~~~~-~~~~~~l~~~--~~GGH~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
.+||...... .... .....+..++ +++.|....+. + .+.+.|.+||-
T Consensus 197 G~V~~~Sa~~~~~l~~~~~~~y~e~~v~g~~a~Hs~l~~n--~---~V~~~I~~FLw 248 (249)
T 3fle_A 197 GRVSNSSSQSLQYLLRGSTKSYQEMKFKGAKAQHSQLHEN--K---DVANEIIQFLW 248 (249)
T ss_dssp SSSBHHHHHTHHHHSTTCSSEEEEEEEESGGGSTGGGGGC--H---HHHHHHHHHHT
T ss_pred CcccHHHHHHHHHHHhhCCCceEEEEEeCCCCchhccccC--H---HHHHHHHHHhc
Confidence 8998764322 1111 1222333444 45899998882 2 58899999983
|
| >1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=4.7e-15 Score=152.86 Aligned_cols=108 Identities=13% Similarity=0.001 Sum_probs=85.0
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEE
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAI 238 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lv 238 (578)
.+++|||+||++++....|...++..|.++||+|+++|+||||.++.. ...+|+.+.++.+.+..+..++++|
T Consensus 30 ~~~~VvllHG~~~~~~~~~~~~l~~~L~~~G~~v~~~d~~g~g~~~~~-------~~~~~l~~~i~~~~~~~g~~~v~lV 102 (317)
T 1tca_A 30 VSKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLNDTQ-------VNTEYMVNAITALYAGSGNNKLPVL 102 (317)
T ss_dssp CSSEEEEECCTTCCHHHHHTTTHHHHHHTTTCEEEEECCTTTTCSCHH-------HHHHHHHHHHHHHHHHTTSCCEEEE
T ss_pred CCCeEEEECCCCCCcchhhHHHHHHHHHhCCCEEEEECCCCCCCCcHH-------HHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 346799999996644433622788899989999999999999875321 2357888999999888877899999
Q ss_pred EEchHHHHHHHHHhhcC-CCCCccEEEEEcCCcchh
Q 008093 239 GTSIGANILVKYLGEEG-EKTPVAGAAAICSPWDLL 273 (578)
Q Consensus 239 GhSmGG~ial~ya~~~p-~~~~V~~~Vlis~p~d~~ 273 (578)
||||||.++..++...+ ...+|+++|+++++.+..
T Consensus 103 GhS~GG~va~~~~~~~~~~~~~v~~lV~l~~~~~g~ 138 (317)
T 1tca_A 103 TWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGT 138 (317)
T ss_dssp EETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTTCB
T ss_pred EEChhhHHHHHHHHHcCccchhhhEEEEECCCCCCC
Confidence 99999999998888765 112799999999987543
|
| >2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.2e-15 Score=150.34 Aligned_cols=143 Identities=12% Similarity=0.087 Sum_probs=89.6
Q ss_pred eeEEEEEec-CCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHH--HHHHHHHhCCceEEEEe
Q 008093 120 YRRQLFRLS-DGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIR--HLVFNTAKRGWNVVVSN 196 (578)
Q Consensus 120 y~r~~l~~~-DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~--~l~~~l~~~Gy~Vvv~D 196 (578)
.++..+..+ +|..+.++.+.|.+... ....+...|+||++||++++ ...|.. .+...+.+.||.|+.+|
T Consensus 7 ~~~~~~~s~~~~~~~~~~v~~P~~~~~-------~~~~~~~~p~vv~~HG~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~ 78 (263)
T 2uz0_A 7 VMKIEYYSQVLDMEWGVNVLYPDANRV-------EEPECEDIPVLYLLHGMSGN-HNSWLKRTNVERLLRGTNLIVVMPN 78 (263)
T ss_dssp EEEEEEEETTTTEEEEEEEEECC----------------CCBCEEEEECCTTCC-TTHHHHHSCHHHHTTTCCCEEEECC
T ss_pred EeEEEEechhhCCceeEEEEeCCCccc-------cCCcCCCCCEEEEECCCCCC-HHHHHhccCHHHHHhcCCeEEEEEC
Confidence 455555544 67788888887754100 00013467999999999654 444523 23344445799999999
Q ss_pred CCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchh
Q 008093 197 HRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL 273 (578)
Q Consensus 197 ~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~ 273 (578)
+++++.+.......+.....+|+.++++....+. +..+++++||||||.+++.++. +++ +++++|++++..+..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~-~~~--~~~~~v~~~~~~~~~ 154 (263)
T 2uz0_A 79 TSNGWYTDTQYGFDYYTALAEELPQVLKRFFPNMTSKREKTFIAGLSMGGYGCFKLAL-TTN--RFSHAASFSGALSFQ 154 (263)
T ss_dssp CTTSTTSBCTTSCBHHHHHHTHHHHHHHHHCTTBCCCGGGEEEEEETHHHHHHHHHHH-HHC--CCSEEEEESCCCCSS
T ss_pred CCCCccccCCCcccHHHHHHHHHHHHHHHHhccccCCCCceEEEEEChHHHHHHHHHh-Ccc--ccceEEEecCCcchh
Confidence 9988775433211111112234444444332211 2368999999999999999999 887 799999999887654
|
| >3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.62 E-value=1.6e-14 Score=144.14 Aligned_cols=232 Identities=13% Similarity=0.135 Sum_probs=138.0
Q ss_pred EEEe-cCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHH--HHHHHHHhCCceEEEEeCCCC
Q 008093 124 LFRL-SDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIR--HLVFNTAKRGWNVVVSNHRGL 200 (578)
Q Consensus 124 ~l~~-~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~--~l~~~l~~~Gy~Vvv~D~RG~ 200 (578)
.+.. .+|..+.++.+.|+.. ..+...|+||++||++++. ..|.. .+...+.+.||.|+++|.+|+
T Consensus 19 ~~~s~~~g~~~~~~v~~P~~~-----------~~~~~~P~vv~lHG~~~~~-~~~~~~~~~~~~~~~~g~~vv~~d~~~~ 86 (280)
T 3ls2_A 19 THSAVSTHCTMRFAVFLPPGA-----------SESNKVPVLYWLSGLTCTD-ENFMQKAGAFKKAAELGIAIVAPDTSPR 86 (280)
T ss_dssp EEEETTTTEEEEEEEEECTTC-----------BTTBCEEEEEEECCTTCCS-HHHHHHSCCHHHHHHHTCEEEECCSSCC
T ss_pred EEechhcCCceEEEEEcCCCC-----------CCCCCcCEEEEeCCCCCCh-hhhhcchhHHHHHhhCCeEEEEeCCccc
Confidence 3443 4688888888887541 1134679999999996544 34422 245566678999999999887
Q ss_pred CCCCCCCC--------CCCCC----------CchHHH-HHHHHHHHHHCCC-CcEEEEEEchHHHHHHHHHhhcCCCCCc
Q 008093 201 GGVSITSD--------CFYNA----------GWTEDA-REVIGYLHHEYPK-APLFAIGTSIGANILVKYLGEEGEKTPV 260 (578)
Q Consensus 201 G~S~~~~~--------~~~~~----------~~~~Dl-~~~i~~l~~~~~~-~~i~lvGhSmGG~ial~ya~~~p~~~~V 260 (578)
|.+..... ..|.. .+.+++ .+++.++.+.++. .+++++||||||.+++.++..+|+ .+
T Consensus 87 g~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~G~S~GG~~a~~~a~~~p~--~~ 164 (280)
T 3ls2_A 87 GDNVPNEDSYDFAQGAGFYVNATQAPYNTHFNMYDYVVNELPALIEQHFPVTSTKAISGHSMGGHGALMIALKNPQ--DY 164 (280)
T ss_dssp STTSCCCSCTTSSTTCCTTCBCCSTTTTTTCBHHHHHHTHHHHHHHHHSSEEEEEEEEEBTHHHHHHHHHHHHSTT--TC
T ss_pred ccccccccccccccCCccccccccccccccccHHHHHHHHHHHHHHhhCCCCCCeEEEEECHHHHHHHHHHHhCch--hh
Confidence 76532211 00110 112222 3566777777653 689999999999999999999998 89
Q ss_pred cEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHH
Q 008093 261 AGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVD 340 (578)
Q Consensus 261 ~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~ 340 (578)
++++++++..+..... +....+. .+..... . .+.. .+..
T Consensus 165 ~~~~~~s~~~~~~~~~------~~~~~~~--------~~~g~~~---------~---------~~~~---------~~~~ 203 (280)
T 3ls2_A 165 VSASAFSPIVNPINCP------WGVKAFT--------GYLGADK---------T---------TWAQ---------YDSC 203 (280)
T ss_dssp SCEEEESCCSCGGGSH------HHHHHHH--------HHHCSCG---------G---------GTGG---------GCHH
T ss_pred eEEEEecCccCcccCc------chhhHHH--------hhcCchH---------H---------HHHh---------cCHH
Confidence 9999999877654321 0001111 1110000 0 0000 0001
Q ss_pred HHHHhCCcccccCCCccceEEEEeCCCCCCCCCC----cchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHH
Q 008093 341 TYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEA----IPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNE 416 (578)
Q Consensus 341 ~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~----~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~e 416 (578)
.+..... ..+.+|+|+++|++|++++.+. ....+.....++++.+++++||.-++- . .+.+.+.+
T Consensus 204 ~~~~~~~-----~~~~~p~li~~G~~D~~v~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~----~--~~~~~~~~ 272 (280)
T 3ls2_A 204 KLMAKAE-----QSNYLPMLVSQGDADNFLDEQLKPQNLVAVAKQKDYPLTLEMQTGYDHSYFFI----S--SFIDQHLV 272 (280)
T ss_dssp HHHHTCC-----GGGCCCEEEEEETTCTTCCCCCCHHHHHHHHHHHTCCEEEEEETTCCSSHHHH----H--HHHHHHHH
T ss_pred HHHHhcc-----ccCCCcEEEEEeCCCcccCCchhHHHHHHHHHHhCCCceEEEeCCCCCchhhH----H--HHHHHHHH
Confidence 1111100 0136799999999999999742 222344566789999999999953221 0 13345556
Q ss_pred HHHhh
Q 008093 417 YLGVL 421 (578)
Q Consensus 417 FL~~~ 421 (578)
|+.+.
T Consensus 273 ~~~~~ 277 (280)
T 3ls2_A 273 FHHQY 277 (280)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76654
|
| >4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=99.60 E-value=3.7e-15 Score=144.33 Aligned_cols=181 Identities=13% Similarity=0.020 Sum_probs=118.1
Q ss_pred CCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCC--CCCCCchH----HHHHHHHHHHHH-
Q 008093 157 DDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDC--FYNAGWTE----DAREVIGYLHHE- 229 (578)
Q Consensus 157 ~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~--~~~~~~~~----Dl~~~i~~l~~~- 229 (578)
.+.+++||++||++ ++...+ ..+++.+...|+.|+++|.+|++.-+..... .......+ .+..+++.+...
T Consensus 19 ~~a~~~Vv~lHG~G-~~~~~~-~~l~~~l~~~~~~v~~P~~~g~~w~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 96 (210)
T 4h0c_A 19 QRAKKAVVMLHGRG-GTAADI-ISLQKVLKLDEMAIYAPQATNNSWYPYSFMAPVQQNQPALDSALALVGEVVAEIEAQG 96 (210)
T ss_dssp TTCSEEEEEECCTT-CCHHHH-HGGGGTSSCTTEEEEEECCGGGCSSSSCTTSCGGGGTTHHHHHHHHHHHHHHHHHHTT
T ss_pred ccCCcEEEEEeCCC-CCHHHH-HHHHHHhCCCCeEEEeecCCCCCccccccCCCcccchHHHHHHHHHHHHHHHHHHHhC
Confidence 35678999999994 455444 5677788778999999999987643221111 11111222 344444444433
Q ss_pred CCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccc
Q 008093 230 YPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSR 309 (578)
Q Consensus 230 ~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~ 309 (578)
.+..+++++|+|+||.+++.++.++|+ +++++|.+++.+.....
T Consensus 97 i~~~ri~l~G~S~Gg~~a~~~a~~~p~--~~~~vv~~sg~l~~~~~---------------------------------- 140 (210)
T 4h0c_A 97 IPAEQIYFAGFSQGACLTLEYTTRNAR--KYGGIIAFTGGLIGQEL---------------------------------- 140 (210)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHHTBS--CCSEEEEETCCCCSSSC----------------------------------
T ss_pred CChhhEEEEEcCCCcchHHHHHHhCcc--cCCEEEEecCCCCChhh----------------------------------
Confidence 245689999999999999999999998 89999998764311000
Q ss_pred cCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcch---HHHhcCCCE
Q 008093 310 LANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPW---DECRANKNV 386 (578)
Q Consensus 310 ~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~---~~~~~~~~~ 386 (578)
... ...-...++|+|++||++|++||.+.... .+.....++
T Consensus 141 --~~~----------------------------------~~~~~~~~~Pvl~~hG~~D~~vp~~~~~~~~~~L~~~g~~v 184 (210)
T 4h0c_A 141 --AIG----------------------------------NYKGDFKQTPVFISTGNPDPHVPVSRVQESVTILEDMNAAV 184 (210)
T ss_dssp --CGG----------------------------------GCCBCCTTCEEEEEEEESCTTSCHHHHHHHHHHHHHTTCEE
T ss_pred --hhh----------------------------------hhhhhccCCceEEEecCCCCccCHHHHHHHHHHHHHCCCCe
Confidence 000 00001125799999999999999874332 244566789
Q ss_pred EEEEeCCCCccccccccccCcccHHHHHHHHHH
Q 008093 387 VLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 387 ~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
++.++++.||-.-.+ -.+.+.+||.
T Consensus 185 ~~~~ypg~gH~i~~~--------el~~i~~wL~ 209 (210)
T 4h0c_A 185 SQVVYPGRPHTISGD--------EIQLVNNTIL 209 (210)
T ss_dssp EEEEEETCCSSCCHH--------HHHHHHHTTT
T ss_pred EEEEECCCCCCcCHH--------HHHHHHHHHc
Confidence 999999999943222 2356667764
|
| >3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=4.1e-15 Score=164.45 Aligned_cols=253 Identities=11% Similarity=0.059 Sum_probs=154.6
Q ss_pred eEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHH--HH-------------------
Q 008093 121 RRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASY--IR------------------- 179 (578)
Q Consensus 121 ~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~y--i~------------------- 179 (578)
+...|++.||.+|..+.+.|.+ ..+.|+||+.||+++.....+ +.
T Consensus 42 ~~v~i~~~DG~~L~a~l~~P~~--------------~~~~P~vl~~~pyg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 107 (560)
T 3iii_A 42 KDGTVEMRDGEKLYINIFRPNK--------------DGKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEES 107 (560)
T ss_dssp EEEEEECTTSCEEEEEEEECSS--------------SSCEEEEEEEESSCTTCCCC--CHHHHSGGGCCCCCCTTCCTTS
T ss_pred EEEEEECCCCcEEEEEEEecCC--------------CCCCCEEEEecCCCCCcccccccccccccccccccccccccccC
Confidence 4456888999999999888743 245799999999966532112 00
Q ss_pred HHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC-CCCcEEEEEEchHHHHHHHHHhhcCCCC
Q 008093 180 HLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY-PKAPLFAIGTSIGANILVKYLGEEGEKT 258 (578)
Q Consensus 180 ~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~-~~~~i~lvGhSmGG~ial~ya~~~p~~~ 258 (578)
..+..++++||.|+++|+||+|+|.+... .+.....+|+.++++++.++- .+.++.++|+||||.+++.+|+..++
T Consensus 108 ~~~~~la~~Gy~vv~~D~RG~G~S~G~~~-~~~~~~~~D~~~~i~~l~~~~~~~~~igl~G~S~GG~~al~~a~~~p~-- 184 (560)
T 3iii_A 108 PDPGFWVPNDYVVVKVALRGSDKSKGVLS-PWSKREAEDYYEVIEWAANQSWSNGNIGTNGVSYLAVTQWWVASLNPP-- 184 (560)
T ss_dssp CCHHHHGGGTCEEEEEECTTSTTCCSCBC-TTSHHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHTTCCT--
T ss_pred CCHHHHHhCCCEEEEEcCCCCCCCCCccc-cCChhHHHHHHHHHHHHHhCCCCCCcEEEEccCHHHHHHHHHHhcCCC--
Confidence 12578899999999999999999986532 222245689999999998652 23689999999999999999998887
Q ss_pred CccEEEEEcCCcchhhhhHH----HhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccC
Q 008093 259 PVAGAAAICSPWDLLIGDRF----IGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVG 334 (578)
Q Consensus 259 ~V~~~Vlis~p~d~~~~~~~----l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~ 334 (578)
.++++|..++..|....... ....+. .++...+. ... +......+. ..++..
T Consensus 185 ~l~aiv~~~~~~d~~~~~~~~gG~~~~~~~-~~w~~~~~-------~~~-~~~~~~~~~--------~~~~~~------- 240 (560)
T 3iii_A 185 HLKAMIPWEGLNDMYREVAFHGGIPDTGFY-RFWTQGIF-------ARW-TDNPNIEDL--------IQAQQE------- 240 (560)
T ss_dssp TEEEEEEESCCCBHHHHTTEETTEECCSHH-HHHHHHHH-------HHT-TTCTTBCCH--------HHHHHH-------
T ss_pred ceEEEEecCCcccccccceecCCCCchhHH-HHHHhhhc-------ccc-ccccchHHH--------HHHHHH-------
Confidence 79999999998886532100 000110 11100000 000 000000010 111111
Q ss_pred CCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCC-CCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHH
Q 008093 335 KFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVC-TVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRA 413 (578)
Q Consensus 335 g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpiv-p~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~ 413 (578)
....++||+..+. .+.+|++|+|+++|-.|..+ ....+.........+.-+.+ -.++|.+..- .. ...+.
T Consensus 241 -hp~~d~~W~~~~~--~~~~I~vPvl~v~Gw~D~~~~~~g~l~~y~~l~~~~k~l~i-h~~~~~~~~~---~~--~~~~~ 311 (560)
T 3iii_A 241 -HPLFDDFWKQRQV--PLSQIKTPLLTCASWSTQGLHNRGSFEGFKQAASEEKWLYV-HGRKEWESYY---AR--ENLER 311 (560)
T ss_dssp -CCSSCHHHHTTBC--CGGGCCSCEEEEEEGGGTTTTHHHHHHHHHHCCCSSEEEEE-ESSCHHHHHH---SH--HHHHH
T ss_pred -CCCcchHhhccCC--chhhCCCCEEEeCCcCCCcccchhHHHHHHhccccCcEEEE-CCCCCcCccc---Ch--hHHHH
Confidence 1223457776554 68899999999999999732 22333333333333444443 2234543221 11 14467
Q ss_pred HHHHHHhhcC
Q 008093 414 VNEYLGVLHS 423 (578)
Q Consensus 414 v~eFL~~~~~ 423 (578)
..+|++..++
T Consensus 312 ~~~wfD~~Lk 321 (560)
T 3iii_A 312 QKSFFDFYLK 321 (560)
T ss_dssp HHHHHHHHTS
T ss_pred HHHHHHHHhC
Confidence 7888888765
|
| >3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822} | Back alignment and structure |
|---|
Probab=99.58 E-value=2.6e-14 Score=145.23 Aligned_cols=127 Identities=12% Similarity=0.170 Sum_probs=92.9
Q ss_pred ecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCC--------
Q 008093 127 LSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHR-------- 198 (578)
Q Consensus 127 ~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~R-------- 198 (578)
..+|..+.+..+.|... +...|+||++||+++ +...|...++..+.+.||.|+++|+|
T Consensus 34 ~~~~~~l~~~~~~P~~~-------------~~~~p~vv~lHG~~~-~~~~~~~~~~~~l~~~g~~v~~~d~~~~~~p~~~ 99 (304)
T 3d0k_A 34 RNADRPFTLNTYRPYGY-------------TPDRPVVVVQHGVLR-NGADYRDFWIPAADRHKLLIVAPTFSDEIWPGVE 99 (304)
T ss_dssp -CTTCCEEEEEEECTTC-------------CTTSCEEEEECCTTC-CHHHHHHHTHHHHHHHTCEEEEEECCTTTSCHHH
T ss_pred CCCCceEEEEEEeCCCC-------------CCCCcEEEEeCCCCC-CHHHHHHHHHHHHHHCCcEEEEeCCccccCCCcc
Confidence 45778887766665331 245799999999955 44445466788888899999999999
Q ss_pred ----CC--CCCCCCCCCCCCCCchHHHHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 199 ----GL--GGVSITSDCFYNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 199 ----G~--G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
|+ |.|.... .......+|+.++++++.+++ +..+++++||||||.+++.++..+++. +++++|+.++++
T Consensus 100 ~~~~g~~~g~s~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~-~~~~~vl~~~~~ 176 (304)
T 3d0k_A 100 SYNNGRAFTAAGNPR--HVDGWTYALVARVLANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQPHA-PFHAVTAANPGW 176 (304)
T ss_dssp HTTTTTCBCTTSCBC--CGGGSTTHHHHHHHHHHHHTTSCCCSSEEEEEETHHHHHHHHHHHHSCST-TCSEEEEESCSS
T ss_pred ccccCccccccCCCC--cccchHHHHHHHHHHHHHhccCCCCCcEEEEEeChHHHHHHHHHHHCCCC-ceEEEEEecCcc
Confidence 55 5554321 111233478999999998864 357899999999999999999998742 688888777654
|
| >3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.8e-14 Score=143.34 Aligned_cols=206 Identities=14% Similarity=0.123 Sum_probs=125.8
Q ss_pred cEEEEECCCCCCCccHHHHHHHHHHHhCCc---eEEEEeCCCCCC------CC----CC-------CCCCCCCCchHHHH
Q 008093 161 PIAIVIPGLTSDSAASYIRHLVFNTAKRGW---NVVVSNHRGLGG------VS----IT-------SDCFYNAGWTEDAR 220 (578)
Q Consensus 161 PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy---~Vvv~D~RG~G~------S~----~~-------~~~~~~~~~~~Dl~ 220 (578)
++|||+||++++.. .| ..++..|.++++ .+++++.++.|. +. .. ........+.+|+.
T Consensus 4 ~pvvllHG~~~~~~-~~-~~l~~~L~~~~~~~~~~~~~~v~~~G~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~ 81 (254)
T 3ds8_A 4 IPIILIHGSGGNAS-SL-DKMADQLMNEYRSSNEALTMTVNSEGKIKFEGKLTKDAKRPIIKFGFEQNQATPDDWSKWLK 81 (254)
T ss_dssp CCEEEECCTTCCTT-TT-HHHHHHHHHTTCCCCCEEEEEEETTTEEEEESCCCTTCSSCEEEEEESSTTSCHHHHHHHHH
T ss_pred CCEEEECCCCCCcc-hH-HHHHHHHHHhcCCCceEEEEEEcCCCeEEEEEEeccCCCCCEEEEEecCCCCCHHHHHHHHH
Confidence 45889999966544 45 788999988764 344443333331 11 11 01111123457888
Q ss_pred HHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCC---CccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHH
Q 008093 221 EVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKT---PVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQ 297 (578)
Q Consensus 221 ~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~---~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~ 297 (578)
++++.+.++++..++++|||||||.+++.|+.++++.. +|+++|++++|++........
T Consensus 82 ~~i~~l~~~~~~~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~------------------ 143 (254)
T 3ds8_A 82 IAMEDLKSRYGFTQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDPNDNG------------------ 143 (254)
T ss_dssp HHHHHHHHHHCCSEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCSCHHHHC------------------
T ss_pred HHHHHHHHHhCCCceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCcccccccc------------------
Confidence 88899998888889999999999999999999988643 699999999998765321000
Q ss_pred HHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeC------CCCCCC
Q 008093 298 DYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSL------DDPVCT 371 (578)
Q Consensus 298 ~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~------dDpivp 371 (578)
..+ +.... .. .......+.. ....+.+ ++|+|.|+|. +|.+||
T Consensus 144 -------~~~----~~~~~--p~--------------~~~~~~~~~~---~~~~~~~-~~~vl~I~G~~~~~~~~Dg~Vp 192 (254)
T 3ds8_A 144 -------MDL----SFKKL--PN--------------STPQMDYFIK---NQTEVSP-DLEVLAIAGELSEDNPTDGIVP 192 (254)
T ss_dssp -------SCT----TCSSC--SS--------------CCHHHHHHHH---TGGGSCT-TCEEEEEEEESBTTBCBCSSSB
T ss_pred -------ccc----ccccC--Cc--------------chHHHHHHHH---HHhhCCC-CcEEEEEEecCCCCCCCCcEee
Confidence 000 00000 00 0000001111 1223333 7999999999 999999
Q ss_pred CCCcchHHHhcC---CCEEEEEeCC--CCccccccccccCcccHHHHHHHHHHhhc
Q 008093 372 VEAIPWDECRAN---KNVVLATTWH--GGHLAFFEGLTAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 372 ~~~~~~~~~~~~---~~~~l~~~~~--GGH~~~~eg~~~~~~w~~~~v~eFL~~~~ 422 (578)
............ ......++.+ ++|..+.+. + .+.+.|.+||+++.
T Consensus 193 ~~ss~~l~~~~~~~~~~~~~~~~~g~~a~Hs~l~~~--~---~v~~~i~~fL~~~~ 243 (254)
T 3ds8_A 193 TISSLATRLFMPGSAKAYIEDIQVGEDAVHQTLHET--P---KSIEKTYWFLEKFK 243 (254)
T ss_dssp HHHHTGGGGTSBTTBSEEEEEEEESGGGCGGGGGGS--H---HHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHhhccCcceEEEEEeCCCCchhcccCC--H---HHHHHHHHHHHHhc
Confidence 875433211111 2233344444 779988882 2 48899999999864
|
| >3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=2.4e-15 Score=158.56 Aligned_cols=188 Identities=15% Similarity=0.137 Sum_probs=125.1
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCC-----------CCC-C-----C--------
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITS-----------DCF-Y-----N-------- 212 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~-----------~~~-~-----~-------- 212 (578)
...|+||++||++++ ...| ..++..|+++||.|+++|+||+|.+.... ... + .
T Consensus 96 ~~~P~Vv~~HG~~~~-~~~~-~~~a~~La~~Gy~V~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 173 (383)
T 3d59_A 96 EKYPLVVFSHGLGAF-RTLY-SAIGIDLASHGFIVAAVEHRDRSASATYYFKDQSAAEIGDKSWLYLRTLKQEEETHIRN 173 (383)
T ss_dssp SCEEEEEEECCTTCC-TTTT-HHHHHHHHHTTCEEEEECCCSSCSSEEEECSSHHHHHHTCCEEEECCCCCHHHHHHHHH
T ss_pred CCCCEEEEcCCCCCC-chHH-HHHHHHHHhCceEEEEeccCCCCccceeecCCccccccCCceeeeccccCcccchhhhH
Confidence 467999999999654 4445 78899999999999999999998864210 000 0 0
Q ss_pred ---CCchHHHHHHHHHHHHH----------------------CCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEc
Q 008093 213 ---AGWTEDAREVIGYLHHE----------------------YPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAIC 267 (578)
Q Consensus 213 ---~~~~~Dl~~~i~~l~~~----------------------~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis 267 (578)
....+|+..+++++.+. .+..+++++||||||.+++.++...+ +++++|+++
T Consensus 174 ~~~~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~---~v~a~v~~~ 250 (383)
T 3d59_A 174 EQVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSEDQ---RFRCGIALD 250 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHHHHHHHCT---TCCEEEEES
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHHHHHhhCC---CccEEEEeC
Confidence 01136888888888652 12347999999999999999887754 599999886
Q ss_pred CCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCC
Q 008093 268 SPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCS 347 (578)
Q Consensus 268 ~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s 347 (578)
+..... .
T Consensus 251 ~~~~p~--------------------------------------~----------------------------------- 257 (383)
T 3d59_A 251 AWMFPL--------------------------------------G----------------------------------- 257 (383)
T ss_dssp CCCTTC--------------------------------------C-----------------------------------
T ss_pred CccCCC--------------------------------------c-----------------------------------
Confidence 532100 0
Q ss_pred cccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccc-----------------cccC--cc
Q 008093 348 SSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEG-----------------LTAA--GM 408 (578)
Q Consensus 348 ~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg-----------------~~~~--~~ 408 (578)
...+.++++|+|+++|++|..++....-........+.++.+++++||..+.+. ..+. ..
T Consensus 258 -~~~~~~i~~P~Lii~g~~D~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~ 336 (383)
T 3d59_A 258 -DEVYSRIPQPLFFINSEYFQYPANIIKMKKCYSPDKERKMITIRGSVHQNFADFTFATGKIIGHMLKLKGDIDSNVAID 336 (383)
T ss_dssp -GGGGGSCCSCEEEEEETTTCCHHHHHHHHTTCCTTSCEEEEEETTCCGGGGSGGGGSSCHHHHHHTTSSCSSCHHHHHH
T ss_pred -hhhhccCCCCEEEEecccccchhhHHHHHHHHhcCCceEEEEeCCCcCCCcccHhhhhhHHhhhhhcccCCcCHHHHHH
Confidence 011246789999999999985432100011122346789999999999886431 0111 02
Q ss_pred cHHHHHHHHHHhhcCC
Q 008093 409 WWVRAVNEYLGVLHSS 424 (578)
Q Consensus 409 w~~~~v~eFL~~~~~~ 424 (578)
.+.+.+.+||++.+..
T Consensus 337 ~~~~~~~~Fl~~~L~~ 352 (383)
T 3d59_A 337 LSNKASLAFLQKHLGL 352 (383)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHcCC
Confidence 3446788999987653
|
| >3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A | Back alignment and structure |
|---|
Probab=99.55 E-value=8.3e-14 Score=147.51 Aligned_cols=117 Identities=21% Similarity=0.150 Sum_probs=77.2
Q ss_pred CCCcEEEEECCCCCCCcc---------HHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCC-C---CchHHHHHHHH
Q 008093 158 DTTPIAIVIPGLTSDSAA---------SYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN-A---GWTEDAREVIG 224 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~---------~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~-~---~~~~Dl~~~i~ 224 (578)
...|+||++||+++.... .+...++..+.++||+|+++|+||||.|......... . ....|....+.
T Consensus 77 ~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~~~~~~~~~~~~~~~~d~~~~~~ 156 (397)
T 3h2g_A 77 GPYPLLGWGHPTEALRAQEQAKEIRDAKGDDPLVTRLASQGYVVVGSDYLGLGKSNYAYHPYLHSASEASATIDAMRAAR 156 (397)
T ss_dssp SCEEEEEEECCCCCBTTCCHHHHHHHTTTCSHHHHTTGGGTCEEEEECCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCcCCCCcccccccccccchHHHHHHHHHCCCEEEEecCCCCCCCCCCccchhhhhhHHHHHHHHHHHHH
Confidence 457899999999765432 0124577888899999999999999998643221111 0 11233333334
Q ss_pred HHHHHCC---CCcEEEEEEchHHHHHHHHHhhc----CCCCCccEEEEEcCCcchhh
Q 008093 225 YLHHEYP---KAPLFAIGTSIGANILVKYLGEE----GEKTPVAGAAAICSPWDLLI 274 (578)
Q Consensus 225 ~l~~~~~---~~~i~lvGhSmGG~ial~ya~~~----p~~~~V~~~Vlis~p~d~~~ 274 (578)
.+..+++ ..+++++||||||.+++.++... .....+.+++..+++.++..
T Consensus 157 ~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~ 213 (397)
T 3h2g_A 157 SVLQHLKTPLSGKVMLSGYSQGGHTAMATQREIEAHLSKEFHLVASAPISGPYALEQ 213 (397)
T ss_dssp HHHHHHTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTTSEEEEEEEESCCSSHHH
T ss_pred HHHHhcCCCCCCcEEEEEECHHHHHHHHHHHHhhhhcCcCcceEEEecccccccHHH
Confidence 4443333 25899999999999998776322 22235888888888888754
|
| >1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.55 E-value=2.3e-14 Score=140.29 Aligned_cols=200 Identities=12% Similarity=0.008 Sum_probs=116.0
Q ss_pred CCcEEEEECCCCCCCccHH---HHHHHHHHHhCCceEEEEeCCC---------------------CCCCCCCCCCCCCCC
Q 008093 159 TTPIAIVIPGLTSDSAASY---IRHLVFNTAKRGWNVVVSNHRG---------------------LGGVSITSDCFYNAG 214 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~y---i~~l~~~l~~~Gy~Vvv~D~RG---------------------~G~S~~~~~~~~~~~ 214 (578)
.+|.||++||+++ +...| +..+.+.|.+.||+|+++|+|+ +|.+..-.. .....
T Consensus 4 ~~~~vl~lHG~g~-~~~~~~~~~~~l~~~l~~~g~~v~~~d~p~~~~~~~~~~~~~~~~~~~~~g~g~~~~w~~-~~~~~ 81 (243)
T 1ycd_A 4 QIPKLLFLHGFLQ-NGKVFSEKSSGIRKLLKKANVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADVNRAWFY-HSEIS 81 (243)
T ss_dssp CCCEEEEECCTTC-CHHHHHHHTHHHHHHHHHTTCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTTCCEESSC-CCSSG
T ss_pred cCceEEEeCCCCc-cHHHHHHHHHHHHHHHhhcceEEEEcCCCeeCCCcCcccccccccccccCCCCCCccccc-CCCCc
Confidence 4688999999955 45444 2356777777799999999993 333210000 00111
Q ss_pred chHHHHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhhcCC----CCCccEEEEEcCCcchhhhhHHHhhHHHHHHH
Q 008093 215 WTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGE----KTPVAGAAAICSPWDLLIGDRFIGRRLIQKIY 288 (578)
Q Consensus 215 ~~~Dl~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~----~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~ 288 (578)
...|+.++++++.... ...+++++||||||.+++.++.+.+. ..++++++++++........
T Consensus 82 ~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~v~~~g~~~~~~~~------------ 149 (243)
T 1ycd_A 82 HELDISEGLKSVVDHIKANGPYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVISGYSFTEPDP------------ 149 (243)
T ss_dssp GGCCCHHHHHHHHHHHHHHCCCSEEEEETHHHHHHHHHHHHHHHHSTTCCCCSEEEEESCCCCEEECT------------
T ss_pred chhhHHHHHHHHHHHHHhcCCeeEEEEeChHHHHHHHHHHHHhhcccCCCCceEEEEecCCCCCCccc------------
Confidence 2245555555554422 13478999999999999999887531 12577888776543211000
Q ss_pred HHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCC
Q 008093 289 DRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDP 368 (578)
Q Consensus 289 ~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDp 368 (578)
. ..... .+... +. .....+.++++|+|+++|++|+
T Consensus 150 ---------~----~~~~~----------------~~~~~-------~~---------~~~~~~~~~~~P~l~i~G~~D~ 184 (243)
T 1ycd_A 150 ---------E----HPGEL----------------RITEK-------FR---------DSFAVKPDMKTKMIFIYGASDQ 184 (243)
T ss_dssp ---------T----STTCE----------------EECGG-------GT---------TTTCCCTTCCCEEEEEEETTCS
T ss_pred ---------c----ccccc----------------ccchh-------HH---------HhccCcccCCCCEEEEEeCCCC
Confidence 0 00000 00000 00 0112356789999999999999
Q ss_pred CCCCCCcchHHHh-cCC-----CEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcC
Q 008093 369 VCTVEAIPWDECR-ANK-----NVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHS 423 (578)
Q Consensus 369 ivp~~~~~~~~~~-~~~-----~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~ 423 (578)
++|.+........ ... .....+++++||....+ . .+.+.+.+||++...
T Consensus 185 ~vp~~~~~~~~~~~~~~~g~~~~~~~~~~~~~gH~~~~~----~--~~~~~i~~fl~~~~~ 239 (243)
T 1ycd_A 185 AVPSVRSKYLYDIYLKAQNGNKEKVLAYEHPGGHMVPNK----K--DIIRPIVEQITSSLQ 239 (243)
T ss_dssp SSCHHHHHHHHHHHHHHTTTCTTTEEEEEESSSSSCCCC----H--HHHHHHHHHHHHHHC
T ss_pred ccCHHHHHHHHHHhhhhccccccccEEEecCCCCcCCch----H--HHHHHHHHHHHHhhh
Confidence 9998744322111 111 12445677789975433 1 378899999987643
|
| >4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58} | Back alignment and structure |
|---|
Probab=99.54 E-value=4.1e-14 Score=141.78 Aligned_cols=207 Identities=13% Similarity=0.086 Sum_probs=124.5
Q ss_pred cCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHH--HHHHHHHhCCceEEEEeCCCCCCCCC
Q 008093 128 SDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIR--HLVFNTAKRGWNVVVSNHRGLGGVSI 205 (578)
Q Consensus 128 ~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~--~l~~~l~~~Gy~Vvv~D~RG~G~S~~ 205 (578)
.+|..+.++.+.|++. .+...|+||++||.+++.. .|.. .+...+.+.||.|+++|.+++|....
T Consensus 31 ~~~~~~~~~v~~P~~~------------~~~~~p~vv~lHG~~~~~~-~~~~~~~~~~~~~~~g~~vv~~d~~~rg~~~~ 97 (283)
T 4b6g_A 31 TLQCEMKFAVYLPNNP------------ENRPLGVIYWLSGLTCTEQ-NFITKSGFQRYAAEHQVIVVAPDTSPRGEQVP 97 (283)
T ss_dssp TTTEEEEEEEEECCCT------------TCCCEEEEEEECCTTCCSH-HHHHHSCTHHHHHHHTCEEEEECSSCCSTTSC
T ss_pred hhCCceEEEEEeCCCC------------CCCCCCEEEEEcCCCCCcc-chhhcccHHHHHhhCCeEEEEecccccccccc
Confidence 4688888888877541 1356799999999965444 3422 24556677899999999764443211
Q ss_pred CCC--------CCCC----------CCchHH-HHHHHHHHHHHCCC-CcEEEEEEchHHHHHHHHHhhcCCCCCccEEEE
Q 008093 206 TSD--------CFYN----------AGWTED-AREVIGYLHHEYPK-APLFAIGTSIGANILVKYLGEEGEKTPVAGAAA 265 (578)
Q Consensus 206 ~~~--------~~~~----------~~~~~D-l~~~i~~l~~~~~~-~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vl 265 (578)
... ..|. ..+.+. +.+++.++.+.++. .+++++||||||.+++.++.++|+ .++++++
T Consensus 98 ~~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~G~S~GG~~a~~~a~~~p~--~~~~~~~ 175 (283)
T 4b6g_A 98 NDDAYDLGQSAGFYLNATEQPWAANYQMYDYILNELPRLIEKHFPTNGKRSIMGHSMGGHGALVLALRNQE--RYQSVSA 175 (283)
T ss_dssp CCSSTTSBTTBCTTSBCCSTTGGGTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEETHHHHHHHHHHHHHGG--GCSCEEE
T ss_pred ccccccccCCCcccccCccCcccchhhHHHHHHHHHHHHHHHhCCCCCCeEEEEEChhHHHHHHHHHhCCc--cceeEEE
Confidence 100 0000 011222 23566677777653 689999999999999999999998 8999999
Q ss_pred EcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHh
Q 008093 266 ICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRN 345 (578)
Q Consensus 266 is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~ 345 (578)
+++..+..... +....+. .+..... ..+.. .+...+...
T Consensus 176 ~s~~~~~~~~~------~~~~~~~--------~~~g~~~------------------~~~~~---------~~~~~~~~~ 214 (283)
T 4b6g_A 176 FSPILSPSLVP------WGEKAFT--------AYLGKDR------------------EKWQQ---------YDANSLIQQ 214 (283)
T ss_dssp ESCCCCGGGSH------HHHHHHH--------HHHCSCG------------------GGGGG---------GCHHHHHHH
T ss_pred ECCccccccCc------chhhhHH--------hhcCCch------------------HHHHh---------cCHHHHHHh
Confidence 99877653211 0000011 1110000 00000 001111111
Q ss_pred CCcccccCCCccceEEEEeCCCCCCCCC----CcchHHHhcCCCEEEEEeCCCCcc
Q 008093 346 CSSSTYVGNVSIPLLCISSLDDPVCTVE----AIPWDECRANKNVVLATTWHGGHL 397 (578)
Q Consensus 346 ~s~~~~l~~I~vPvLiI~g~dDpivp~~----~~~~~~~~~~~~~~l~~~~~GGH~ 397 (578)
+ +...|+++++|++|++++.. .....+.....++++.+++++||-
T Consensus 215 ------~-~~~~p~li~~G~~D~~~~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~ 263 (283)
T 4b6g_A 215 ------G-YKVQGMRIDQGLEDEFLPTQLRTEDFIETCRAANQPVDVRFHKGYDHS 263 (283)
T ss_dssp ------T-CCCSCCEEEEETTCTTHHHHTCHHHHHHHHHHHTCCCEEEEETTCCSS
T ss_pred ------c-ccCCCEEEEecCCCccCcchhhHHHHHHHHHHcCCCceEEEeCCCCcC
Confidence 1 13569999999999999862 222234455677999999999995
|
| >1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=2.5e-13 Score=135.10 Aligned_cols=136 Identities=14% Similarity=0.102 Sum_probs=94.7
Q ss_pred eeEEEEEec-CCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHH-----HHHHHHHHHhC----C
Q 008093 120 YRRQLFRLS-DGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASY-----IRHLVFNTAKR----G 189 (578)
Q Consensus 120 y~r~~l~~~-DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~y-----i~~l~~~l~~~----G 189 (578)
.++..+... +|..+.++.+.|.+. ..+...|+||++||.+++...+. +..++..+.+. |
T Consensus 32 ~~~~~~~s~~~~~~~~~~v~~P~~~-----------~~~~~~P~vv~lHG~g~~~~~~~~~~~~~~~~~~~l~~~g~~~~ 100 (268)
T 1jjf_A 32 VVNISYFSTATNSTRPARVYLPPGY-----------SKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKP 100 (268)
T ss_dssp EEEEEEEETTTTEEEEEEEEECTTC-----------CTTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCC
T ss_pred EEEEEEeccccCCceEEEEEeCCCC-----------CCCCCccEEEEECCCCCCcchhhhccccHHHHHHHHHHcCCCCC
Confidence 345555544 677888888877541 11346799999999865433221 23456777766 5
Q ss_pred ceEEEEeCCCCCCCCCCCCCCCCCCchHH-HHHHHHHHHHHCCC----CcEEEEEEchHHHHHHHHHhhcCCCCCccEEE
Q 008093 190 WNVVVSNHRGLGGVSITSDCFYNAGWTED-AREVIGYLHHEYPK----APLFAIGTSIGANILVKYLGEEGEKTPVAGAA 264 (578)
Q Consensus 190 y~Vvv~D~RG~G~S~~~~~~~~~~~~~~D-l~~~i~~l~~~~~~----~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~V 264 (578)
|.|+.+|+||++.... ..+ ..+.+| +.++++++.++++. .+++++||||||.+++.++..+++ .+++++
T Consensus 101 ~~vv~~d~~~~~~~~~---~~~-~~~~~~~~~~~~~~l~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~--~~~~~v 174 (268)
T 1jjf_A 101 LIIVTPNTNAAGPGIA---DGY-ENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLD--KFAYIG 174 (268)
T ss_dssp CEEEEECCCCCCTTCS---CHH-HHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTT--TCSEEE
T ss_pred EEEEEeCCCCCCcccc---ccH-HHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEECHHHHHHHHHHHhCch--hhhheE
Confidence 9999999999875321 111 112233 56778888877753 689999999999999999999988 799999
Q ss_pred EEcCCcch
Q 008093 265 AICSPWDL 272 (578)
Q Consensus 265 lis~p~d~ 272 (578)
++++..+.
T Consensus 175 ~~s~~~~~ 182 (268)
T 1jjf_A 175 PISAAPNT 182 (268)
T ss_dssp EESCCTTS
T ss_pred EeCCCCCC
Confidence 99886543
|
| >2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A | Back alignment and structure |
|---|
Probab=99.51 E-value=4.1e-13 Score=137.86 Aligned_cols=219 Identities=14% Similarity=0.078 Sum_probs=123.8
Q ss_pred EEEEECCC-CCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEE
Q 008093 162 IAIVIPGL-TSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGT 240 (578)
Q Consensus 162 iVVllHGl-~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGh 240 (578)
.++++||+ .+++...| ..++..+. .+|+|+++|+||+|.+.............+-+.++++.+....+..+++++||
T Consensus 91 ~l~~~hg~g~~~~~~~~-~~l~~~L~-~~~~v~~~d~~G~g~~~~~~~~~~~~~~~~~a~~~~~~i~~~~~~~p~~l~G~ 168 (319)
T 2hfk_A 91 VLVGCTGTAANGGPHEF-LRLSTSFQ-EERDFLAVPLPGYGTGTGTGTALLPADLDTALDAQARAILRAAGDAPVVLLGH 168 (319)
T ss_dssp EEEEECCCCTTCSTTTT-HHHHHTTT-TTCCEEEECCTTCCBC---CBCCEESSHHHHHHHHHHHHHHHHTTSCEEEEEE
T ss_pred cEEEeCCCCCCCcHHHH-HHHHHhcC-CCCceEEecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 79999983 24444455 67777775 68999999999999862100000111222333344455544445678999999
Q ss_pred chHHHHHHHHHhhcCC--CCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhc
Q 008093 241 SIGANILVKYLGEEGE--KTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKK 318 (578)
Q Consensus 241 SmGG~ial~ya~~~p~--~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~ 318 (578)
||||.++..+|.+.++ ...|++++++++....... .+ ..++.. +.. ..... .+.. .
T Consensus 169 S~GG~vA~~~A~~l~~~~g~~v~~lvl~d~~~~~~~~--~~-----~~~~~~-l~~---~~~~~---~~~~-~------- 226 (319)
T 2hfk_A 169 AGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQE--PI-----EVWSRQ-LGE---GLFAG---ELEP-M------- 226 (319)
T ss_dssp THHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTSCH--HH-----HHTHHH-HHH---HHHHT---CSSC-C-------
T ss_pred CHHHHHHHHHHHHHHHhhCCCceEEEEeCCCCCCchh--HH-----HHHHHH-hhH---HHHHh---hccc-c-------
Confidence 9999999999987632 1279999999875322110 01 011110 000 00000 0000 0
Q ss_pred cCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCC-cchHHHhcCCCEEEEEeCCCCcc
Q 008093 319 SRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEA-IPWDECRANKNVVLATTWHGGHL 397 (578)
Q Consensus 319 ~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~-~~~~~~~~~~~~~l~~~~~GGH~ 397 (578)
...++. ....|..... ......+++|+++++| +|++++.+. ..........+..+..++ |||+
T Consensus 227 --~~~~~~-----------~~~~~~~~~~-~~~~~~i~~Pvl~i~g-~D~~~~~~~~~~~~~~~~~~~~~~~~v~-g~H~ 290 (319)
T 2hfk_A 227 --SDARLL-----------AMGRYARFLA-GPRPGRSSAPVLLVRA-SEPLGDWQEERGDWRAHWDLPHTVADVP-GDHF 290 (319)
T ss_dssp --CHHHHH-----------HHHHHHHHHH-SCCCCCCCSCEEEEEE-SSCSSCCCGGGCCCSCCCSSCSEEEEES-SCTT
T ss_pred --chHHHH-----------HHHHHHHHHH-hCCCCCcCCCEEEEEc-CCCCCCccccccchhhcCCCCCEEEEeC-CCcH
Confidence 000110 0011111100 1124788999999999 999988764 322222223467888888 7999
Q ss_pred ccccccccCcccHHHHHHHHHHhhcC
Q 008093 398 AFFEGLTAAGMWWVRAVNEYLGVLHS 423 (578)
Q Consensus 398 ~~~eg~~~~~~w~~~~v~eFL~~~~~ 423 (578)
.+++. ....+.+.|.+||+....
T Consensus 291 ~~~~e---~~~~~~~~i~~~L~~~~~ 313 (319)
T 2hfk_A 291 TMMRD---HAPAVAEAVLSWLDAIEG 313 (319)
T ss_dssp HHHHT---CHHHHHHHHHHHHHHHHC
T ss_pred HHHHH---hHHHHHHHHHHHHHhcCC
Confidence 87742 233588999999987543
|
| >4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=3.6e-13 Score=136.57 Aligned_cols=190 Identities=16% Similarity=0.128 Sum_probs=120.0
Q ss_pred CCCCcEEEEECCCCCCCccHHHHHHHHHHHhC--CceEEEEeCC------CCCCCCCCCCCCCCCC----------chHH
Q 008093 157 DDTTPIAIVIPGLTSDSAASYIRHLVFNTAKR--GWNVVVSNHR------GLGGVSITSDCFYNAG----------WTED 218 (578)
Q Consensus 157 ~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~--Gy~Vvv~D~R------G~G~S~~~~~~~~~~~----------~~~D 218 (578)
.+..|+||++||+ |++...+ ..+++.+... ++.+++++-+ |.|.+-.......... ..++
T Consensus 63 ~~~~plVI~LHG~-G~~~~~~-~~~~~~l~~~~~~~~~v~P~Ap~~~~~~~~G~~Wfd~~~~~~~~~~~~~~~~~~~~~~ 140 (285)
T 4fhz_A 63 GEATSLVVFLHGY-GADGADL-LGLAEPLAPHLPGTAFVAPDAPEPCRANGFGFQWFPIPWLDGSSETAAAEGMAAAARD 140 (285)
T ss_dssp TCCSEEEEEECCT-TBCHHHH-HTTHHHHGGGSTTEEEEEECCSEECTTSSSCEESSCCHHHHCCCHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEEcCC-CCCHHHH-HHHHHHHHHhCCCeEEEecCCCcccccCCCcccccccccccCcccchhhHHHHHHHHH
Confidence 4567999999999 4555555 5677777654 7888888754 2222100000000000 0235
Q ss_pred HHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhH
Q 008093 219 AREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGL 296 (578)
Q Consensus 219 l~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l 296 (578)
+.++++.+..++ +..+++++|+|+||.+++.++.++++ +++++|.+++.+.... . +
T Consensus 141 l~~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~--~~a~vv~~sG~l~~~~-----------~-----~---- 198 (285)
T 4fhz_A 141 LDAFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAE--EIAGIVGFSGRLLAPE-----------R-----L---- 198 (285)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSS--CCSEEEEESCCCSCHH-----------H-----H----
T ss_pred HHHHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCcc--cCceEEEeecCccCch-----------h-----h----
Confidence 556666665554 45689999999999999999999998 8999998875431100 0 0
Q ss_pred HHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcc
Q 008093 297 QDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIP 376 (578)
Q Consensus 297 ~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~ 376 (578)
. ...+.++|+|++||++|++||.+...
T Consensus 199 -----------------------------~------------------------~~~~~~~Pvl~~hG~~D~~Vp~~~~~ 225 (285)
T 4fhz_A 199 -----------------------------A------------------------EEARSKPPVLLVHGDADPVVPFADMS 225 (285)
T ss_dssp -----------------------------H------------------------HHCCCCCCEEEEEETTCSSSCTHHHH
T ss_pred -----------------------------h------------------------hhhhhcCcccceeeCCCCCcCHHHHH
Confidence 0 00123579999999999999987443
Q ss_pred h---HHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcCCCcccccc
Q 008093 377 W---DECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSSPYMHVRK 431 (578)
Q Consensus 377 ~---~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~~~~~~~~~ 431 (578)
. .+.....++++.++++.||-.-.+ ..+.+.+||++.+...+-+.++
T Consensus 226 ~~~~~L~~~g~~~~~~~y~g~gH~i~~~--------~l~~~~~fL~~~Lpd~~gr~~a 275 (285)
T 4fhz_A 226 LAGEALAEAGFTTYGHVMKGTGHGIAPD--------GLSVALAFLKERLPDACGRTRA 275 (285)
T ss_dssp HHHHHHHHTTCCEEEEEETTCCSSCCHH--------HHHHHHHHHHHHCC--------
T ss_pred HHHHHHHHCCCCEEEEEECCCCCCCCHH--------HHHHHHHHHHHHCcCCcccccc
Confidence 2 344566789999999999953222 3567899999987655444333
|
| >3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=2.5e-12 Score=138.22 Aligned_cols=251 Identities=13% Similarity=0.065 Sum_probs=141.4
Q ss_pred CCcEEEEECCCCCCCcc-------------------HHHHHHHHHH-HhCCceEEEEeCCCCCCCCCCCCCCCCCCch--
Q 008093 159 TTPIAIVIPGLTSDSAA-------------------SYIRHLVFNT-AKRGWNVVVSNHRGLGGVSITSDCFYNAGWT-- 216 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~-------------------~yi~~l~~~l-~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~-- 216 (578)
..|+|.+-||..|.... .|-..++..+ .++||.|+++|++|+|.+ |..+..
T Consensus 105 ~~pvvs~~hgt~g~~~~CaPS~~~~~~~~~~~~~~~~~e~~~~~~~~l~~G~~Vv~~Dy~G~G~~-------y~~~~~~~ 177 (462)
T 3guu_A 105 PPKIFSYQVYEDATALDCAPSYSYLTGLDQPNKVTAVLDTPIIIGWALQQGYYVVSSDHEGFKAA-------FIAGYEEG 177 (462)
T ss_dssp SCEEEEEECCCCCCSGGGCHHHHHBSCSCCTTGGGGSTHHHHHHHHHHHTTCEEEEECTTTTTTC-------TTCHHHHH
T ss_pred CCcEEEEeCCcccCCCCcCCccccccCCCccccchhhhhHHHHHHHHHhCCCEEEEecCCCCCCc-------ccCCcchh
Confidence 47999999998764221 1112345566 889999999999999962 222221
Q ss_pred HHHHHHHHHHHHHC---CCCcEEEEEEchHHHHHHHHHhhc---CCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHH
Q 008093 217 EDAREVIGYLHHEY---PKAPLFAIGTSIGANILVKYLGEE---GEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDR 290 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~---~~~~i~lvGhSmGG~ial~ya~~~---p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~ 290 (578)
.++.+.++..+... ...++.++|||+||..++..+... ..+..+.|++.+++|.|+......+.......++..
T Consensus 178 ~~vlD~vrAa~~~~~~~~~~~v~l~G~S~GG~aal~aa~~~~~yapel~~~g~~~~~~p~dl~~~~~~~~~~~~~g~~~~ 257 (462)
T 3guu_A 178 MAILDGIRALKNYQNLPSDSKVALEGYSGGAHATVWATSLAESYAPELNIVGASHGGTPVSAKDTFTFLNGGPFAGFALA 257 (462)
T ss_dssp HHHHHHHHHHHHHTTCCTTCEEEEEEETHHHHHHHHHHHHHHHHCTTSEEEEEEEESCCCBHHHHHHHHTTSTTHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCCCCEEEEeeCccHHHHHHHHHhChhhcCccceEEEEEecCCCCHHHHHHHhccchhHHHHHH
Confidence 23344444443331 357999999999999998766543 333469999999999998776555443322222111
Q ss_pred HHHHhHHHHHhhhcccccccCCH---HHHh--ccC--CHHHHHh---------hhh-hccCCCCCHHHHHHhCCccc---
Q 008093 291 ALTIGLQDYAQLHEPRYSRLANW---EGIK--KSR--SIRDFDS---------HAT-CLVGKFETVDTYYRNCSSST--- 350 (578)
Q Consensus 291 ~l~~~l~~~~~~~~~~l~~~~d~---~~i~--~~~--s~~efd~---------~~~-~~~~g~~~~~~yy~~~s~~~--- 350 (578)
.+ .++........+.+...... ..+. +.. .+.+... .++ .....-..+.+.+++.....
T Consensus 258 ~l-~Gl~~~yP~l~~~l~~~lt~~g~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~lg~~~~ 336 (462)
T 3guu_A 258 GV-SGLSLAHPDMESFIEARLNAKGQRTLKQIRGRGFCLPQVVLTYPFLNVFSLVNDTNLLNEAPIASILKQETVVQAEA 336 (462)
T ss_dssp HH-HHHHHHCHHHHHHHHTTBCHHHHHHHHHHTSTTCCHHHHHHHCTTCCGGGGBSCTTGGGSTTHHHHHHHSBCCTTTC
T ss_pred HH-HhHHhhCcchhHHHHHHhCHHHHHHHHHHHhcCcchHHHHHhhccCCHHHHcCCCccccCHHHHHHHHhhccccccc
Confidence 11 11111100000000000110 0011 111 2222111 111 00111233455555433211
Q ss_pred --ccCCCccceEEEEeCCCCCCCCCCcch---HHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcCC
Q 008093 351 --YVGNVSIPLLCISSLDDPVCTVEAIPW---DECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSS 424 (578)
Q Consensus 351 --~l~~I~vPvLiI~g~dDpivp~~~~~~---~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~~ 424 (578)
--.++++|+|++||.+|+++|.+.... ..+....++++.++++++|....+. -...+.+||++....
T Consensus 337 ~~g~~~~~~PvlI~hG~~D~vVP~~~s~~l~~~l~~~G~~V~~~~y~~~~H~~~~~~-------~~~d~l~WL~~r~~G 408 (462)
T 3guu_A 337 SYTVSVPKFPRFIWHAIPDEIVPYQPAATYVKEQCAKGANINFSPYPIAEHLTAEIF-------GLVPSLWFIKQAFDG 408 (462)
T ss_dssp SSCCCCCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEESSCCHHHHHHH-------THHHHHHHHHHHHHT
T ss_pred ccCCCCCCCCEEEEeCCCCCcCCHHHHHHHHHHHHHcCCCeEEEEECcCCccCchhh-------hHHHHHHHHHHHhCC
Confidence 235679999999999999999874332 2445567899999999999876541 145677888776543
|
| >1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A | Back alignment and structure |
|---|
Probab=99.47 E-value=5.2e-14 Score=142.34 Aligned_cols=107 Identities=13% Similarity=0.106 Sum_probs=77.5
Q ss_pred cEEEEECCCCCCCc--cHHHHHHHHHHHhC--CceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCC-CCcE
Q 008093 161 PIAIVIPGLTSDSA--ASYIRHLVFNTAKR--GWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYP-KAPL 235 (578)
Q Consensus 161 PiVVllHGl~G~s~--~~yi~~l~~~l~~~--Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~-~~~i 235 (578)
++||++||++++.. ..| ..+++.|.+. ||+|+++|+ |||.|...... +.....+++.++++.+..... ..++
T Consensus 6 ~pvVllHG~~~~~~~~~~~-~~~~~~L~~~~~g~~v~~~d~-G~g~s~~~~~~-~~~~~~~~~~~~~~~l~~~~~l~~~~ 82 (279)
T 1ei9_A 6 LPLVIWHGMGDSCCNPLSM-GAIKKMVEKKIPGIHVLSLEI-GKTLREDVENS-FFLNVNSQVTTVCQILAKDPKLQQGY 82 (279)
T ss_dssp CCEEEECCTTCCSCCTTTT-HHHHHHHHHHSTTCCEEECCC-SSSHHHHHHHH-HHSCHHHHHHHHHHHHHSCGGGTTCE
T ss_pred CcEEEECCCCCCCCCcccH-HHHHHHHHHHCCCcEEEEEEe-CCCCccccccc-cccCHHHHHHHHHHHHHhhhhccCCE
Confidence 34889999976542 345 6788888765 889999998 99976421111 112344667777777764211 2589
Q ss_pred EEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcc
Q 008093 236 FAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (578)
Q Consensus 236 ~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d 271 (578)
.+|||||||.++..|+.++|+ .+|+++|++++|..
T Consensus 83 ~lvGhSmGG~ia~~~a~~~~~-~~v~~lv~~~~p~~ 117 (279)
T 1ei9_A 83 NAMGFSQGGQFLRAVAQRCPS-PPMVNLISVGGQHQ 117 (279)
T ss_dssp EEEEETTHHHHHHHHHHHCCS-SCEEEEEEESCCTT
T ss_pred EEEEECHHHHHHHHHHHHcCC-cccceEEEecCccC
Confidence 999999999999999999986 24999999998764
|
| >1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22 | Back alignment and structure |
|---|
Probab=99.44 E-value=2.3e-12 Score=124.93 Aligned_cols=211 Identities=15% Similarity=0.166 Sum_probs=117.8
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEE
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAI 238 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lv 238 (578)
.++.|+++||++| +...| ..++..+.+ |+|+++|+||+|. ..+|+.+.++.+ .+..+++++
T Consensus 16 ~~~~l~~~hg~~~-~~~~~-~~~~~~l~~--~~v~~~d~~g~~~------------~~~~~~~~i~~~---~~~~~~~l~ 76 (230)
T 1jmk_C 16 QEQIIFAFPPVLG-YGLMY-QNLSSRLPS--YKLCAFDFIEEED------------RLDRYADLIQKL---QPEGPLTLF 76 (230)
T ss_dssp CSEEEEEECCTTC-CGGGG-HHHHHHCTT--EEEEEECCCCSTT------------HHHHHHHHHHHH---CCSSCEEEE
T ss_pred CCCCEEEECCCCC-chHHH-HHHHHhcCC--CeEEEecCCCHHH------------HHHHHHHHHHHh---CCCCCeEEE
Confidence 3577999999965 45556 677777754 9999999999874 235666665544 345689999
Q ss_pred EEchHHHHHHHHHhhcCC-CCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHh
Q 008093 239 GTSIGANILVKYLGEEGE-KTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIK 317 (578)
Q Consensus 239 GhSmGG~ial~ya~~~p~-~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~ 317 (578)
||||||.+++.++.+.+. ..++.++++++++...... ...... ....+....... +....... ..+
T Consensus 77 G~S~Gg~ia~~~a~~~~~~~~~v~~lvl~~~~~~~~~~-~~~~~~---------~~~~~~~~~~~~-~~~~~~~~-~~~- 143 (230)
T 1jmk_C 77 GYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVS-DLDGRT---------VESDVEALMNVN-RDNEALNS-EAV- 143 (230)
T ss_dssp EETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC------------------CCHHHHHHHT-TTCSGGGS-HHH-
T ss_pred EECHhHHHHHHHHHHHHHcCCCccEEEEECCCCCCccc-cccccc---------HHHHHHHHHhcC-hhhhhhhh-HHH-
Confidence 999999999999887642 1268999999865432110 000000 000000000000 00000000 000
Q ss_pred ccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCcc
Q 008093 318 KSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHL 397 (578)
Q Consensus 318 ~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~ 397 (578)
...+.... .....|... .....++++|+++++|++|++++.....+ .....++..+..+++ ||.
T Consensus 144 ----~~~~~~~~-------~~~~~~~~~---~~~~~~~~~P~l~i~g~~D~~~~~~~~~w-~~~~~~~~~~~~i~g-~H~ 207 (230)
T 1jmk_C 144 ----KHGLKQKT-------HAFYSYYVN---LISTGQVKADIDLLTSGADFDIPEWLASW-EEATTGAYRMKRGFG-THA 207 (230)
T ss_dssp ----HHHHHHHH-------HHHHHHHHH---CCCCSCBSSEEEEEECSSCCCCCTTEECS-GGGBSSCEEEEECSS-CGG
T ss_pred ----HHHHHHHH-------HHHHHHhhh---ccccccccccEEEEEeCCCCCCccccchH-HHhcCCCeEEEEecC-ChH
Confidence 00011000 011222221 12457889999999999999987443222 233445788999985 996
Q ss_pred ccccccccCcccHHHHHHHHHH
Q 008093 398 AFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 398 ~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
.++.. +....+.+.+.+||.
T Consensus 208 ~~~~~--~~~~~~~~~i~~~l~ 227 (230)
T 1jmk_C 208 EMLQG--ETLDRNAGILLEFLN 227 (230)
T ss_dssp GTTSH--HHHHHHHHHHHHHHT
T ss_pred HHcCc--HhHHHHHHHHHHHHh
Confidence 65542 112235566666654
|
| >2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=1.9e-12 Score=127.68 Aligned_cols=202 Identities=13% Similarity=0.101 Sum_probs=117.4
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEE
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAI 238 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lv 238 (578)
.++.|+++||++| +...| ..++..+. .+|+|+++|+||++. ..+|+.+.++. ..+..+++++
T Consensus 21 ~~~~l~~~hg~~~-~~~~~-~~~~~~l~-~~~~v~~~d~~g~~~------------~~~~~~~~i~~---~~~~~~~~l~ 82 (244)
T 2cb9_A 21 GGKNLFCFPPISG-FGIYF-KDLALQLN-HKAAVYGFHFIEEDS------------RIEQYVSRITE---IQPEGPYVLL 82 (244)
T ss_dssp CSSEEEEECCTTC-CGGGG-HHHHHHTT-TTSEEEEECCCCSTT------------HHHHHHHHHHH---HCSSSCEEEE
T ss_pred CCCCEEEECCCCC-CHHHH-HHHHHHhC-CCceEEEEcCCCHHH------------HHHHHHHHHHH---hCCCCCEEEE
Confidence 4567999999965 44455 67777775 589999999999742 34555555543 3345689999
Q ss_pred EEchHHHHHHHHHhhc---CCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHH
Q 008093 239 GTSIGANILVKYLGEE---GEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEG 315 (578)
Q Consensus 239 GhSmGG~ial~ya~~~---p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~ 315 (578)
||||||.+++.++.+. ++ ++.++++++++..... +..... ...+ .. ..+..
T Consensus 83 GhS~Gg~va~~~a~~~~~~~~--~v~~lvl~~~~~~~~~----~~~~~~----~~~~----~~-----------~~~~~- 136 (244)
T 2cb9_A 83 GYSAGGNLAFEVVQAMEQKGL--EVSDFIIVDAYKKDQS----ITADTE----NDDS----AA-----------YLPEA- 136 (244)
T ss_dssp EETHHHHHHHHHHHHHHHTTC--CEEEEEEESCCCCCSC----CCCC---------------C-----------CSCHH-
T ss_pred EECHhHHHHHHHHHHHHHcCC--CccEEEEEcCCCCccc----cccccc----HHHH----HH-----------HhHHH-
Confidence 9999999999999876 34 7999999987542110 000000 0000 00 00000
Q ss_pred HhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeC--CCCCCCCCCcchHHHhcCCCEEEEEeCC
Q 008093 316 IKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSL--DDPVCTVEAIPWDECRANKNVVLATTWH 393 (578)
Q Consensus 316 i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~--dDpivp~~~~~~~~~~~~~~~~l~~~~~ 393 (578)
+ ...+.... .....|+.. .....++++|+++++|+ +|++.+.....+ .....++..+..++
T Consensus 137 ~-----~~~~~~~~-------~~~~~~~~~---~~~~~~i~~Pvl~i~g~~~~D~~~~~~~~~w-~~~~~~~~~~~~i~- 199 (244)
T 2cb9_A 137 V-----RETVMQKK-------RCYQEYWAQ---LINEGRIKSNIHFIEAGIQTETSGAMVLQKW-QDAAEEGYAEYTGY- 199 (244)
T ss_dssp H-----HHHHTHHH-------HHHHHHHHH---CCCCSCBSSEEEEEECSBCSCCCHHHHTTSS-GGGBSSCEEEEECS-
T ss_pred H-----HHHHHHHH-------HHHHHHHHh---hccCCCcCCCEEEEEccCccccccccchhHH-HHhcCCCCEEEEec-
Confidence 0 00000000 001222221 12456789999999999 898532222122 22334578899998
Q ss_pred CCccccccccccCcccHHHHHHHHHHhhcC
Q 008093 394 GGHLAFFEGLTAAGMWWVRAVNEYLGVLHS 423 (578)
Q Consensus 394 GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~ 423 (578)
|||..++.. +....+.+.|.+||.....
T Consensus 200 ggH~~~~~~--~~~~~~~~~i~~~L~~~~~ 227 (244)
T 2cb9_A 200 GAHKDMLEG--EFAEKNANIILNILDKINS 227 (244)
T ss_dssp SBGGGTTSH--HHHHHHHHHHHHHHHTC--
T ss_pred CChHHHcCh--HHHHHHHHHHHHHHhcCcc
Confidence 599766642 1223477888888876543
|
| >3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A | Back alignment and structure |
|---|
Probab=99.41 E-value=4.1e-13 Score=138.64 Aligned_cols=103 Identities=17% Similarity=0.195 Sum_probs=76.4
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEE
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAI 238 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lv 238 (578)
.+|.|+++||++|+ ...| ..++..+ ..+|+|+++|+||+|.+.... ....+-+...++.+....+..+++++
T Consensus 100 ~~~~l~~lhg~~~~-~~~~-~~l~~~L-~~~~~v~~~d~~g~~~~~~~~-----~~~~~~a~~~~~~i~~~~~~~~~~l~ 171 (329)
T 3tej_A 100 NGPTLFCFHPASGF-AWQF-SVLSRYL-DPQWSIIGIQSPRPNGPMQTA-----ANLDEVCEAHLATLLEQQPHGPYYLL 171 (329)
T ss_dssp SSCEEEEECCTTSC-CGGG-GGGGGTS-CTTCEEEEECCCTTTSHHHHC-----SSHHHHHHHHHHHHHHHCSSSCEEEE
T ss_pred CCCcEEEEeCCccc-chHH-HHHHHhc-CCCCeEEEeeCCCCCCCCCCC-----CCHHHHHHHHHHHHHHhCCCCCEEEE
Confidence 45779999999664 4445 5677766 458999999999998764211 11222233446666666677799999
Q ss_pred EEchHHHHHHHHHhh---cCCCCCccEEEEEcCCcc
Q 008093 239 GTSIGANILVKYLGE---EGEKTPVAGAAAICSPWD 271 (578)
Q Consensus 239 GhSmGG~ial~ya~~---~p~~~~V~~~Vlis~p~d 271 (578)
||||||.++..++.+ .++ ++.+++++++...
T Consensus 172 G~S~Gg~ia~~~a~~L~~~~~--~v~~lvl~d~~~~ 205 (329)
T 3tej_A 172 GYSLGGTLAQGIAARLRARGE--QVAFLGLLDTWPP 205 (329)
T ss_dssp EETHHHHHHHHHHHHHHHTTC--CEEEEEEESCCCT
T ss_pred EEccCHHHHHHHHHHHHhcCC--cccEEEEeCCCCC
Confidence 999999999999988 887 8999999987543
|
| >3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=1.2e-12 Score=133.71 Aligned_cols=107 Identities=14% Similarity=0.019 Sum_probs=83.7
Q ss_pred CCcEEEEECCCCCCCccHHHH-HHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEE
Q 008093 159 TTPIAIVIPGLTSDSAASYIR-HLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFA 237 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~-~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~l 237 (578)
.++.|||+||+.++....| . .+++.|.++||+|+++|+||||.++.. ...+++.+.++.+.+..+..++.+
T Consensus 64 ~~~pVVLvHG~~~~~~~~w-~~~l~~~L~~~Gy~V~a~DlpG~G~~~~~-------~~~~~la~~I~~l~~~~g~~~v~L 135 (316)
T 3icv_A 64 VSKPILLVPGTGTTGPQSF-DSNWIPLSAQLGYTPCWISPPPFMLNDTQ-------VNTEYMVNAITTLYAGSGNNKLPV 135 (316)
T ss_dssp CSSEEEEECCTTCCHHHHH-TTTHHHHHHHTTCEEEEECCTTTTCSCHH-------HHHHHHHHHHHHHHHHTTSCCEEE
T ss_pred CCCeEEEECCCCCCcHHHH-HHHHHHHHHHCCCeEEEecCCCCCCCcHH-------HHHHHHHHHHHHHHHHhCCCceEE
Confidence 4567999999965433455 5 788999999999999999999965321 234788888888888877789999
Q ss_pred EEEchHHHHHHHHHhhcC-CCCCccEEEEEcCCcchh
Q 008093 238 IGTSIGANILVKYLGEEG-EKTPVAGAAAICSPWDLL 273 (578)
Q Consensus 238 vGhSmGG~ial~ya~~~p-~~~~V~~~Vlis~p~d~~ 273 (578)
|||||||.++..++..++ ...+|+++|++++|+...
T Consensus 136 VGHSmGGlvA~~al~~~p~~~~~V~~lV~lapp~~Gt 172 (316)
T 3icv_A 136 LTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGT 172 (316)
T ss_dssp EEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTTCB
T ss_pred EEECHHHHHHHHHHHhccccchhhceEEEECCCCCCc
Confidence 999999999976666653 122899999999998654
|
| >1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus} | Back alignment and structure |
|---|
Probab=99.35 E-value=4.4e-13 Score=144.59 Aligned_cols=111 Identities=14% Similarity=0.054 Sum_probs=85.6
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhC-CceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC--CCCc
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKR-GWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY--PKAP 234 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~-Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~--~~~~ 234 (578)
..+|+||++||++++....|...++..+.++ ||+|+++|+||||.|+............+|+.++++++.++. +..+
T Consensus 68 ~~~p~vvliHG~~~~~~~~w~~~~~~~l~~~~~~~Vi~~D~~g~G~S~~~~~~~~~~~~~~dl~~~i~~L~~~~g~~~~~ 147 (452)
T 1w52_X 68 SSRKTHFVIHGFRDRGEDSWPSDMCKKILQVETTNCISVDWSSGAKAEYTQAVQNIRIVGAETAYLIQQLLTELSYNPEN 147 (452)
T ss_dssp TTSCEEEEECCTTCCSSSSHHHHHHHHHHTTSCCEEEEEECHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred CCCCEEEEEcCCCCCCCchHHHHHHHHHHhhCCCEEEEEecccccccccHHHHHhHHHHHHHHHHHHHHHHHhcCCCccc
Confidence 5678999999997766345645577777765 999999999999998532111111233478899999987553 3678
Q ss_pred EEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 235 LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 235 i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
++++||||||.+++.++.++++ +|.++++++++.
T Consensus 148 i~LvGhSlGg~vA~~~a~~~p~--~v~~iv~ldpa~ 181 (452)
T 1w52_X 148 VHIIGHSLGAHTAGEAGRRLEG--RVGRVTGLDPAE 181 (452)
T ss_dssp EEEEEETHHHHHHHHHHHHTTT--CSSEEEEESCBC
T ss_pred EEEEEeCHHHHHHHHHHHhccc--ceeeEEeccccc
Confidence 9999999999999999999988 899999998754
|
| >1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.34 E-value=3e-11 Score=123.05 Aligned_cols=137 Identities=14% Similarity=0.098 Sum_probs=87.8
Q ss_pred CeeEEEEEecC-CcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCC-CCccHHHHH--HHHHHHhCCceEEE
Q 008093 119 SYRRQLFRLSD-GGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTS-DSAASYIRH--LVFNTAKRGWNVVV 194 (578)
Q Consensus 119 ~y~r~~l~~~D-G~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G-~s~~~yi~~--l~~~l~~~Gy~Vvv 194 (578)
..+...+..+. |..+.+. +.| . ....|+|+++||.++ ++...|... +...+.+.||.|++
T Consensus 8 ~v~~~~~~S~~~~~~i~v~-~~p-~--------------~~~~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~ 71 (304)
T 1sfr_A 8 PVEYLQVPSPSMGRDIKVQ-FQS-G--------------GANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVM 71 (304)
T ss_dssp CCEEEEEEETTTTEEEEEE-EEC-C--------------STTBCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEEE
T ss_pred eEEEEEEECccCCCceEEE-ECC-C--------------CCCCCEEEEeCCCCCCCCcchhhcCCCHHHHHhcCCeEEEE
Confidence 44556666664 5566654 332 2 145789999999942 334445332 34567778999999
Q ss_pred EeCCCCC-CCCCCCCCC-----CCCCchHHH-HHHHHHHHHHCCC--CcEEEEEEchHHHHHHHHHhhcCCCCCccEEEE
Q 008093 195 SNHRGLG-GVSITSDCF-----YNAGWTEDA-REVIGYLHHEYPK--APLFAIGTSIGANILVKYLGEEGEKTPVAGAAA 265 (578)
Q Consensus 195 ~D~RG~G-~S~~~~~~~-----~~~~~~~Dl-~~~i~~l~~~~~~--~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vl 265 (578)
+|.++.+ .++...+.. ....+.+.+ .+++.++.++++. .+++++|+||||.+++.++.++|+ .++++++
T Consensus 72 p~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~--~~~~~v~ 149 (304)
T 1sfr_A 72 PVGGQSSFYSDWYQPACGKAGCQTYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQ--QFVYAGA 149 (304)
T ss_dssp ECCCTTCTTCBCSSCEEETTEEECCBHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTT--TEEEEEE
T ss_pred ECCCCCccccccCCccccccccccccHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCcc--ceeEEEE
Confidence 9997642 221111100 011222222 4566666665543 389999999999999999999998 8999999
Q ss_pred EcCCcchh
Q 008093 266 ICSPWDLL 273 (578)
Q Consensus 266 is~p~d~~ 273 (578)
+++..+..
T Consensus 150 ~sg~~~~~ 157 (304)
T 1sfr_A 150 MSGLLDPS 157 (304)
T ss_dssp ESCCSCTT
T ss_pred ECCccCcc
Confidence 99876543
|
| >1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=6e-13 Score=143.54 Aligned_cols=111 Identities=11% Similarity=0.104 Sum_probs=85.6
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhC-CceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC--CCCc
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKR-GWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY--PKAP 234 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~-Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~--~~~~ 234 (578)
+.+|+||++||++++....|...++..+.++ ||+|+++|+||||.|.............+|+.++++++.++. +..+
T Consensus 68 ~~~p~vvliHG~~~~~~~~w~~~l~~~l~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~li~~L~~~~g~~~~~ 147 (452)
T 1bu8_A 68 LDRKTRFIVHGFIDKGEDGWLLDMCKKMFQVEKVNCICVDWRRGSRTEYTQASYNTRVVGAEIAFLVQVLSTEMGYSPEN 147 (452)
T ss_dssp TTSEEEEEECCSCCTTCTTHHHHHHHHHHTTCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred CCCCeEEEECCCCCCCCchHHHHHHHHHHhhCCCEEEEEechhcccCchhHhHhhHHHHHHHHHHHHHHHHHhcCCCccc
Confidence 5678999999997766355645577777764 999999999999998632111111234578999999997543 3478
Q ss_pred EEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 235 LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 235 i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
++++||||||.+++.++.++|+ +|.++++++++.
T Consensus 148 i~LvGhSlGg~vA~~~a~~~p~--~v~~iv~ldpa~ 181 (452)
T 1bu8_A 148 VHLIGHSLGAHVVGEAGRRLEG--HVGRITGLDPAE 181 (452)
T ss_dssp EEEEEETHHHHHHHHHHHHTTT--CSSEEEEESCBC
T ss_pred eEEEEEChhHHHHHHHHHhccc--ccceEEEecCCc
Confidence 9999999999999999999988 899999998754
|
| >1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.34 E-value=2.9e-11 Score=121.79 Aligned_cols=133 Identities=11% Similarity=0.132 Sum_probs=88.2
Q ss_pred CCeeEEEEEec-CCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCC-CCccHHHH--HHHHHHHhCCceEE
Q 008093 118 FSYRRQLFRLS-DGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTS-DSAASYIR--HLVFNTAKRGWNVV 193 (578)
Q Consensus 118 ~~y~r~~l~~~-DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G-~s~~~yi~--~l~~~l~~~Gy~Vv 193 (578)
...+...+..+ +|..+.+. +.| . . .|+|+++||+++ ++...|.. .+...+.+.||.|+
T Consensus 9 ~~~~~~~~~S~~~~~~~~~~-~~P-~---------------~-~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv 70 (280)
T 1r88_A 9 APYENLMVPSPSMGRDIPVA-FLA-G---------------G-PHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVV 70 (280)
T ss_dssp CCCEEEEEEETTTTEEEEEE-EEC-C---------------S-SSEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEE
T ss_pred CCEEEEEEECcccCCcceEE-EeC-C---------------C-CCEEEEECCCCCCCChhhhhhcccHHHHHhcCCeEEE
Confidence 34566667665 67777776 443 1 1 379999999952 33444523 24566778899999
Q ss_pred EEeCCCCC-CCCCCCCCCCCCCchH-HHHHHHHHHHHHCCC--CcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCC
Q 008093 194 VSNHRGLG-GVSITSDCFYNAGWTE-DAREVIGYLHHEYPK--APLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSP 269 (578)
Q Consensus 194 v~D~RG~G-~S~~~~~~~~~~~~~~-Dl~~~i~~l~~~~~~--~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p 269 (578)
++|.++.+ .+....+. ...+.+ -..+++.++.++++. .+++++|+||||.+++.++.++|+ .+++++++++.
T Consensus 71 ~pd~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~--~~~~~v~~sg~ 146 (280)
T 1r88_A 71 APAGGAYSMYTNWEQDG--SKQWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPD--RFGFAGSMSGF 146 (280)
T ss_dssp EECCCTTSTTSBCSSCT--TCBHHHHHHTHHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTT--TEEEEEEESCC
T ss_pred EECCCCCCccCCCCCCC--CCcHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCcc--ceeEEEEECCc
Confidence 99997643 11111111 012212 123555566555653 489999999999999999999998 89999999987
Q ss_pred cch
Q 008093 270 WDL 272 (578)
Q Consensus 270 ~d~ 272 (578)
.+.
T Consensus 147 ~~~ 149 (280)
T 1r88_A 147 LYP 149 (280)
T ss_dssp CCT
T ss_pred cCc
Confidence 664
|
| >3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A | Back alignment and structure |
|---|
Probab=99.33 E-value=4.6e-12 Score=127.71 Aligned_cols=95 Identities=11% Similarity=0.072 Sum_probs=66.2
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEE
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAI 238 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lv 238 (578)
.+|.||++||++|+ ...| ..++..|. ++|+++|++|... .....+-+.++++.+....+..+++++
T Consensus 23 ~~~~l~~~hg~~~~-~~~~-~~~~~~L~---~~v~~~d~~~~~~---------~~~~~~~a~~~~~~i~~~~~~~~~~l~ 88 (283)
T 3tjm_A 23 SERPLFLVHPIEGS-TTVF-HSLASRLS---IPTYGLQCTRAAP---------LDSIHSLAAYYIDCIRQVQPEGPYRVA 88 (283)
T ss_dssp SSCCEEEECCTTCC-SGGG-HHHHHHCS---SCEEEECCCTTSC---------CSCHHHHHHHHHHHHTTTCCSSCCEEE
T ss_pred CCCeEEEECCCCCC-HHHH-HHHHHhcC---ceEEEEecCCCCC---------CCCHHHHHHHHHHHHHHhCCCCCEEEE
Confidence 45678999999664 4455 67777774 9999999964211 112222233444444444455789999
Q ss_pred EEchHHHHHHHHHhhc---CCCCCcc---EEEEEcCC
Q 008093 239 GTSIGANILVKYLGEE---GEKTPVA---GAAAICSP 269 (578)
Q Consensus 239 GhSmGG~ial~ya~~~---p~~~~V~---~~Vlis~p 269 (578)
||||||.+++.+|.+. ++ ++. +++++++.
T Consensus 89 GhS~Gg~va~~~a~~~~~~~~--~v~~~~~lvlid~~ 123 (283)
T 3tjm_A 89 GYSYGACVAFEMCSQLQAQQS--PAPTHNSLFLFDGS 123 (283)
T ss_dssp EETHHHHHHHHHHHHHHHHHT--TSCCCCEEEEESCC
T ss_pred EECHhHHHHHHHHHHHHHcCC--CCCccceEEEEcCC
Confidence 9999999999998865 66 677 99999864
|
| >1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=7.4e-11 Score=118.34 Aligned_cols=111 Identities=14% Similarity=0.095 Sum_probs=73.6
Q ss_pred cEEEEECCCCC-CCccHHHHH--HHHHHHhCCceEEEEeCCCCC-CCCCCCCCC-----CCCCchHHH-HHHHHHHHHHC
Q 008093 161 PIAIVIPGLTS-DSAASYIRH--LVFNTAKRGWNVVVSNHRGLG-GVSITSDCF-----YNAGWTEDA-REVIGYLHHEY 230 (578)
Q Consensus 161 PiVVllHGl~G-~s~~~yi~~--l~~~l~~~Gy~Vvv~D~RG~G-~S~~~~~~~-----~~~~~~~Dl-~~~i~~l~~~~ 230 (578)
++|+++||+++ ++...|... +...+.+.||.|+++|.+|.+ .+....+.. ....+.+.+ .+++.++.+++
T Consensus 30 ~~v~llHG~~~~~~~~~w~~~~~~~~~l~~~~~~vv~pd~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~i~~~~ 109 (280)
T 1dqz_A 30 HAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQSSFYTDWYQPSQSNGQNYTYKWETFLTREMPAWLQANK 109 (280)
T ss_dssp SEEEECCCTTCCSSSCHHHHHSCHHHHHTTSSSEEEEECCCTTCTTSBCSSSCTTTTCCSCCBHHHHHHTHHHHHHHHHH
T ss_pred CEEEEECCCCCCCCcccccccCcHHHHHhcCCeEEEEECCCCCccccCCCCCCccccccccccHHHHHHHHHHHHHHHHc
Confidence 58999999963 344445221 335577789999999988642 222111110 111222222 45555565544
Q ss_pred CC--CcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchh
Q 008093 231 PK--APLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL 273 (578)
Q Consensus 231 ~~--~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~ 273 (578)
+. .+++++||||||.+++.++.++|+ .+.+++++++..+..
T Consensus 110 ~~~~~~~~l~G~S~GG~~al~~a~~~p~--~~~~~v~~sg~~~~~ 152 (280)
T 1dqz_A 110 GVSPTGNAAVGLSMSGGSALILAAYYPQ--QFPYAASLSGFLNPS 152 (280)
T ss_dssp CCCSSSCEEEEETHHHHHHHHHHHHCTT--TCSEEEEESCCCCTT
T ss_pred CCCCCceEEEEECHHHHHHHHHHHhCCc--hheEEEEecCccccc
Confidence 43 489999999999999999999998 899999999877653
|
| >4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.32 E-value=6.2e-12 Score=124.69 Aligned_cols=184 Identities=13% Similarity=0.059 Sum_probs=110.3
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHh--CCceEEEEeCCCC-----------CCCCCCC--C----CCCCCCch--
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAK--RGWNVVVSNHRGL-----------GGVSITS--D----CFYNAGWT-- 216 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~--~Gy~Vvv~D~RG~-----------G~S~~~~--~----~~~~~~~~-- 216 (578)
+.+++||++||++++ ...+ ..++..+.. .++++++++-+-. +.-+... + +.......
T Consensus 35 ~~~~~VI~LHG~G~~-~~dl-~~l~~~l~~~~~~~~~i~P~Ap~~~~~~~~~~~~~~Wf~~~~~~~~~~~~~~d~~~i~~ 112 (246)
T 4f21_A 35 QARFCVIWLHGLGAD-GHDF-VDIVNYFDVSLDEIRFIFPHADIIPVTINMGMQMRAWYDIKSLDANSLNRVVDVEGINS 112 (246)
T ss_dssp CCCEEEEEEEC--CC-CCCG-GGGGGGCCSCCTTEEEEEECGGGSCTTTHHHHHHHSCTTCCCC---CGGGGSCCC-CHH
T ss_pred cCCeEEEEEcCCCCC-HHHH-HHHHHHhhhcCCCeEEEeCCCCccccccCCCCCcccccccccccccchhhhhhHHHHHH
Confidence 567899999999554 4434 345555543 3678888875321 1101100 0 00001111
Q ss_pred --HHHHHHHHHHHHH-CCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHH
Q 008093 217 --EDAREVIGYLHHE-YPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALT 293 (578)
Q Consensus 217 --~Dl~~~i~~l~~~-~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~ 293 (578)
+.+..+++...+. .+..+++++|+|+||++++.++..+++ ++++++.+|+.......
T Consensus 113 ~~~~i~~li~~~~~~gi~~~ri~l~GfSqGg~~a~~~~~~~~~--~~a~~i~~sG~lp~~~~------------------ 172 (246)
T 4f21_A 113 SIAKVNKLIDSQVNQGIASENIILAGFSQGGIIATYTAITSQR--KLGGIMALSTYLPAWDN------------------ 172 (246)
T ss_dssp HHHHHHHHHHHHHHC-CCGGGEEEEEETTTTHHHHHHHTTCSS--CCCEEEEESCCCTTHHH------------------
T ss_pred HHHHHHHHHHHHHHcCCChhcEEEEEeCchHHHHHHHHHhCcc--ccccceehhhccCcccc------------------
Confidence 2233333333222 356789999999999999999999988 89999999864321100
Q ss_pred HhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCC
Q 008093 294 IGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVE 373 (578)
Q Consensus 294 ~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~ 373 (578)
+... . .-..-++|++++||++|++||.+
T Consensus 173 -------------------------------~~~~-----------------~----~~~~~~~Pvl~~HG~~D~vVp~~ 200 (246)
T 4f21_A 173 -------------------------------FKGK-----------------I----TSINKGLPILVCHGTDDQVLPEV 200 (246)
T ss_dssp -------------------------------HSTT-----------------C----CGGGTTCCEEEEEETTCSSSCHH
T ss_pred -------------------------------cccc-----------------c----cccccCCchhhcccCCCCccCHH
Confidence 0000 0 00012579999999999999987
Q ss_pred Ccch---HHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcC
Q 008093 374 AIPW---DECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHS 423 (578)
Q Consensus 374 ~~~~---~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~ 423 (578)
.... .+....-++++..+++.||-.-.+ -.+.+.+||++.++
T Consensus 201 ~~~~~~~~L~~~g~~v~~~~y~g~gH~i~~~--------~l~~~~~fL~k~l~ 245 (246)
T 4f21_A 201 LGHDLSDKLKVSGFANEYKHYVGMQHSVCME--------EIKDISNFIAKTFK 245 (246)
T ss_dssp HHHHHHHHHHTTTCCEEEEEESSCCSSCCHH--------HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHCCCCeEEEEECCCCCccCHH--------HHHHHHHHHHHHhC
Confidence 4332 244556678999999999954322 34678999987653
|
| >1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A | Back alignment and structure |
|---|
Probab=99.31 E-value=1e-12 Score=141.05 Aligned_cols=111 Identities=13% Similarity=0.099 Sum_probs=85.8
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHh-CCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCC--CCc
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAK-RGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYP--KAP 234 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~-~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~--~~~ 234 (578)
+.+|+||++||++++....|...++..+.+ .||+|+++|+||+|.|.............+|+.++++++.++.+ ..+
T Consensus 68 ~~~~~vvllHG~~~s~~~~w~~~~~~~l~~~~~~~Vi~~D~~g~g~s~~~~~~~~~~~~~~dl~~~i~~l~~~~g~~~~~ 147 (432)
T 1gpl_A 68 LNRKTRFIIHGFTDSGENSWLSDMCKNMFQVEKVNCICVDWKGGSKAQYSQASQNIRVVGAEVAYLVQVLSTSLNYAPEN 147 (432)
T ss_dssp TTSEEEEEECCTTCCTTSHHHHHHHHHHHHHCCEEEEEEECHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred CCCCeEEEECCCCCCCCchHHHHHHHHHHhcCCcEEEEEECccccCccchhhHhhHHHHHHHHHHHHHHHHHhcCCCccc
Confidence 467899999999776645664557788876 79999999999999876221111112334789999999976543 679
Q ss_pred EEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 235 LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 235 i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
++++||||||.+++.++.++++ ++.+++++++..
T Consensus 148 i~lvGhSlGg~vA~~~a~~~p~--~v~~iv~l~pa~ 181 (432)
T 1gpl_A 148 VHIIGHSLGAHTAGEAGKRLNG--LVGRITGLDPAE 181 (432)
T ss_dssp EEEEEETHHHHHHHHHHHTTTT--CSSEEEEESCBC
T ss_pred EEEEEeCHHHHHHHHHHHhccc--ccceeEEecccc
Confidence 9999999999999999998887 799999987653
|
| >2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A | Back alignment and structure |
|---|
Probab=99.30 E-value=1.6e-12 Score=134.95 Aligned_cols=113 Identities=14% Similarity=0.059 Sum_probs=86.1
Q ss_pred CCcEEEEECCCCCCCc--------cHHH----HHHHHHHHhCCce---EEEEeCCCCCCCCCCCCCCCCCCchHHHHHHH
Q 008093 159 TTPIAIVIPGLTSDSA--------ASYI----RHLVFNTAKRGWN---VVVSNHRGLGGVSITSDCFYNAGWTEDAREVI 223 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~--------~~yi----~~l~~~l~~~Gy~---Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i 223 (578)
.+++|||+||+.+++. ...+ +.+++.|.++||+ |+++|+||+|.|.............+|+.+.+
T Consensus 39 ~~~pVVlvHG~~~~~~~~~~~~~~~~~w~~~~~~l~~~L~~~Gy~~~~V~~~D~~g~G~S~~~~~~~~~~~~~~~l~~~I 118 (342)
T 2x5x_A 39 TKTPVIFIHGNGDNAISFDMPPGNVSGYGTPARSVYAELKARGYNDCEIFGVTYLSSSEQGSAQYNYHSSTKYAIIKTFI 118 (342)
T ss_dssp CSCCEEEECCTTCCGGGGGCCCCCCTTTCCCSSCHHHHHHHTTCCTTSEEEECCSCHHHHTCGGGCCBCHHHHHHHHHHH
T ss_pred CCCeEEEECCcCCCcccccccccccccccccHHHHHHHHHhCCCCCCeEEEEeCCCCCccCCccccCCHHHHHHHHHHHH
Confidence 4455999999976421 1123 5678889999998 99999999998753311111223357888888
Q ss_pred HHHHHHCCCCcEEEEEEchHHHHHHHHHhhc--CCCCCccEEEEEcCCcchh
Q 008093 224 GYLHHEYPKAPLFAIGTSIGANILVKYLGEE--GEKTPVAGAAAICSPWDLL 273 (578)
Q Consensus 224 ~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~--p~~~~V~~~Vlis~p~d~~ 273 (578)
+.+.+..+..++++|||||||.+++.++.++ ++ +|+++|++++|....
T Consensus 119 ~~l~~~~g~~~v~LVGHSmGG~iA~~~a~~~~~p~--~V~~lVlla~p~~G~ 168 (342)
T 2x5x_A 119 DKVKAYTGKSQVDIVAHSMGVSMSLATLQYYNNWT--SVRKFINLAGGIRGL 168 (342)
T ss_dssp HHHHHHHTCSCEEEEEETHHHHHHHHHHHHHTCGG--GEEEEEEESCCTTCC
T ss_pred HHHHHHhCCCCEEEEEECHHHHHHHHHHHHcCchh--hhcEEEEECCCcccc
Confidence 8888777777999999999999999999998 66 899999999987543
|
| >3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.30 E-value=5.8e-12 Score=133.63 Aligned_cols=136 Identities=13% Similarity=0.118 Sum_probs=96.4
Q ss_pred CCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHH-----------------HH
Q 008093 118 FSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYI-----------------RH 180 (578)
Q Consensus 118 ~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi-----------------~~ 180 (578)
+..++..+...||.++...++.|... ....|+||++||.++ ...... ..
T Consensus 90 ~~~e~v~~~~~~g~~l~~~l~~P~~~-------------~~~~P~Vv~~HG~g~-~~~~~~~~~g~~~~~~~~y~~~~~~ 155 (398)
T 3nuz_A 90 YRLEKWEFYPLPKCVSTFLVLIPDNI-------------NKPVPAILCIPGSGG-NKEGLAGEPGIAPKLNDRYKDPKLT 155 (398)
T ss_dssp EEEEEEEECCSTTBCEEEEEEEESSC-------------CSCEEEEEEECCTTC-CHHHHHTCCCSSSTTCCSTTCTTTC
T ss_pred EEEEEEEEEcCCCcEEEEEEEeCCCC-------------CCCccEEEEEcCCCC-CcccccccccccccccccccchHHH
Confidence 34455566677999998888776431 246799999999955 332211 14
Q ss_pred HHHHHHhCCceEEEEeCCCCCCCCCCCCCC----CC----------C------CchHHHHHHHHHHHHHC--CCCcEEEE
Q 008093 181 LVFNTAKRGWNVVVSNHRGLGGVSITSDCF----YN----------A------GWTEDAREVIGYLHHEY--PKAPLFAI 238 (578)
Q Consensus 181 l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~----~~----------~------~~~~Dl~~~i~~l~~~~--~~~~i~lv 238 (578)
++..|+++||.|+++|+||+|.+....... +. . ....|+.++++++..+. +..+|.++
T Consensus 156 ~a~~la~~Gy~Vl~~D~rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~ 235 (398)
T 3nuz_A 156 QALNFVKEGYIAVAVDNPAAGEASDLERYTLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVS 235 (398)
T ss_dssp HHHHHHTTTCEEEEECCTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEE
T ss_pred HHHHHHHCCCEEEEecCCCCCccccccccccccccchhhhhhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 788899999999999999999886432100 00 0 11268889999997653 23589999
Q ss_pred EEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 239 GTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 239 GhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
||||||.+++.+++..+ +|+++|++|...
T Consensus 236 G~S~GG~~a~~~aa~~~---~i~a~v~~~~~~ 264 (398)
T 3nuz_A 236 GFSLGTEPMMVLGTLDT---SIYAFVYNDFLC 264 (398)
T ss_dssp EEGGGHHHHHHHHHHCT---TCCEEEEESCBC
T ss_pred EECHhHHHHHHHHhcCC---cEEEEEEecccc
Confidence 99999999988777654 589998876544
|
| >3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482} | Back alignment and structure |
|---|
Probab=99.29 E-value=3.9e-12 Score=134.57 Aligned_cols=135 Identities=14% Similarity=0.092 Sum_probs=94.9
Q ss_pred eEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccH-------------H---HHHHHHH
Q 008093 121 RRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAAS-------------Y---IRHLVFN 184 (578)
Q Consensus 121 ~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~-------------y---i~~l~~~ 184 (578)
++..+...||..+...++.|... ..+.|+||++||.+++.... | ...++..
T Consensus 88 e~v~~~~~~g~~l~~~l~~P~~~-------------~~~~P~Vl~~HG~g~~~~~~~~~~~~~~~~~~~y~~~~~~~a~~ 154 (391)
T 3g8y_A 88 EKWEFYPFPKSVSTFLVLKPEHL-------------KGAVPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMALN 154 (391)
T ss_dssp EEEEECCSTTCCEEEEEEEETTC-------------CSCEEEEEEECCTTCCHHHHTTCCCSSGGGCCCTTSTTTCHHHH
T ss_pred EEEEEEcCCCCEEEEEEEeCCCC-------------CCCCCEEEEeCCCCCCchhhccccccccccchhhcchHHHHHHH
Confidence 34445556899998888776431 24579999999996543211 1 0156788
Q ss_pred HHhCCceEEEEeCCCCCCCCCCCCCC----CCC-C---------------chHHHHHHHHHHHHHC--CCCcEEEEEEch
Q 008093 185 TAKRGWNVVVSNHRGLGGVSITSDCF----YNA-G---------------WTEDAREVIGYLHHEY--PKAPLFAIGTSI 242 (578)
Q Consensus 185 l~~~Gy~Vvv~D~RG~G~S~~~~~~~----~~~-~---------------~~~Dl~~~i~~l~~~~--~~~~i~lvGhSm 242 (578)
++++||.|+++|+||+|.+....... +.. . ...|+.++++++..+. +..+|.++||||
T Consensus 155 la~~G~~Vl~~D~rg~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~S~ 234 (391)
T 3g8y_A 155 MVKEGYVAVAVDNAAAGEASDLECYDKGWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSL 234 (391)
T ss_dssp HHTTTCEEEECCCTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEEGG
T ss_pred HHHCCCEEEEecCCCccccCCcccccccccchHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEECh
Confidence 99999999999999999986542211 111 0 1268889999998654 235799999999
Q ss_pred HHHHHHHHHhhcCCCCCccEEEEEcCCcc
Q 008093 243 GANILVKYLGEEGEKTPVAGAAAICSPWD 271 (578)
Q Consensus 243 GG~ial~ya~~~p~~~~V~~~Vlis~p~d 271 (578)
||.+++.+++..+ +|+++|++++...
T Consensus 235 GG~~al~~a~~~~---~i~a~v~~~~~~~ 260 (391)
T 3g8y_A 235 GTEPMMVLGVLDK---DIYAFVYNDFLCQ 260 (391)
T ss_dssp GHHHHHHHHHHCT---TCCEEEEESCBCC
T ss_pred hHHHHHHHHHcCC---ceeEEEEccCCCC
Confidence 9999998777654 5999998876543
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E | Back alignment and structure |
|---|
Probab=99.29 E-value=9.7e-12 Score=128.13 Aligned_cols=109 Identities=18% Similarity=0.113 Sum_probs=83.5
Q ss_pred CCCcEEEEECCCCCCCc-----cHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCC
Q 008093 158 DTTPIAIVIPGLTSDSA-----ASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPK 232 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~-----~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~ 232 (578)
+++|+|||+||+.++.. ..| ..+++.|.++||+|+++|+||+|.+.... ...+++.+.++.+.+..+.
T Consensus 6 ~~~~~vVlvHG~~~~~~~~~~~~~w-~~l~~~L~~~G~~V~~~d~~g~g~s~~~~------~~~~~l~~~i~~~l~~~~~ 78 (320)
T 1ys1_X 6 ATRYPIILVHGLTGTDKYAGVLEYW-YGIQEDLQQRGATVYVANLSGFQSDDGPN------GRGEQLLAYVKTVLAATGA 78 (320)
T ss_dssp CCSSCEEEECCTTCCSEETTTEESS-TTHHHHHHHTTCCEEECCCCSSCCSSSTT------SHHHHHHHHHHHHHHHHCC
T ss_pred CCCCEEEEECCCCCCccccchHHHH-HHHHHHHHhCCCEEEEEcCCCCCCCCCCC------CCHHHHHHHHHHHHHHhCC
Confidence 45678999999976652 334 77899999999999999999999885431 1234444444444444455
Q ss_pred CcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhh
Q 008093 233 APLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIG 275 (578)
Q Consensus 233 ~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~ 275 (578)
.+++++||||||.++..++..+++ +|+++|++++|......
T Consensus 79 ~~v~lvGHS~GG~va~~~a~~~p~--~V~~lV~i~~p~~G~~~ 119 (320)
T 1ys1_X 79 TKVNLVGHSQGGLTSRYVAAVAPD--LVASVTTIGTPHRGSEF 119 (320)
T ss_dssp SCEEEEEETHHHHHHHHHHHHCGG--GEEEEEEESCCTTCCHH
T ss_pred CCEEEEEECHhHHHHHHHHHhChh--hceEEEEECCCCCCccH
Confidence 689999999999999999999887 89999999988655433
|
| >1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18 | Back alignment and structure |
|---|
Probab=99.28 E-value=4.5e-12 Score=128.41 Aligned_cols=106 Identities=14% Similarity=0.092 Sum_probs=80.9
Q ss_pred CCCcEEEEECCCCCCCc---cHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCc
Q 008093 158 DTTPIAIVIPGLTSDSA---ASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAP 234 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~---~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~ 234 (578)
.++|+||++||+.++.. ..++..+++.|.++||+|+++|+||+|.++. ..+++.+.++.+.+..+..+
T Consensus 5 ~~~~~vvlvHG~~~~~~~~~~~~~~~~~~~L~~~G~~v~~~d~~g~g~s~~---------~~~~~~~~i~~~~~~~~~~~ 75 (285)
T 1ex9_A 5 QTKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSEV---------RGEQLLQQVEEIVALSGQPK 75 (285)
T ss_dssp CCSSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCSSSCHHH---------HHHHHHHHHHHHHHHHCCSC
T ss_pred CCCCeEEEeCCCCCCccccccccHHHHHHHHHhCCCEEEEEeCCCCCCchh---------hHHHHHHHHHHHHHHhCCCC
Confidence 45678999999976543 2233678899999999999999999998641 12344444444444445569
Q ss_pred EEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhh
Q 008093 235 LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLI 274 (578)
Q Consensus 235 i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~ 274 (578)
++++||||||.++..++..+++ +|+++|++++|.....
T Consensus 76 v~lvGhS~GG~~a~~~a~~~p~--~v~~lv~i~~p~~g~~ 113 (285)
T 1ex9_A 76 VNLIGHSHGGPTIRYVAAVRPD--LIASATSVGAPHKGSD 113 (285)
T ss_dssp EEEEEETTHHHHHHHHHHHCGG--GEEEEEEESCCTTCCH
T ss_pred EEEEEECHhHHHHHHHHHhChh--heeEEEEECCCCCCch
Confidence 9999999999999999998887 8999999999765543
|
| >1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19 | Back alignment and structure |
|---|
Probab=99.25 E-value=3.6e-12 Score=137.05 Aligned_cols=111 Identities=11% Similarity=0.137 Sum_probs=82.9
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHH-hCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC--CCCc
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTA-KRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY--PKAP 234 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~-~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~--~~~~ 234 (578)
..+|+||++||++++....|...++..+. ..+|+|+++|+||||.+.............+|+.++++++.++. +..+
T Consensus 67 ~~~p~vvliHG~~~s~~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~y~~~~~~~~~v~~~la~ll~~L~~~~g~~~~~ 146 (449)
T 1hpl_A 67 TGRKTRFIIHGFIDKGEESWLSTMCQNMFKVESVNCICVDWKSGSRTAYSQASQNVRIVGAEVAYLVGVLQSSFDYSPSN 146 (449)
T ss_dssp TTSEEEEEECCCCCTTCTTHHHHHHHHHHHHCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred CCCCeEEEEecCCCCCCccHHHHHHHHHHhcCCeEEEEEeCCcccCCccHHHHHHHHHHHHHHHHHHHHHHHhcCCCccc
Confidence 56789999999977654456455666664 46899999999999987522110001123468888888886443 4568
Q ss_pred EEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 235 LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 235 i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
+++|||||||.+++.++..+++ +|.+++++++..
T Consensus 147 v~LIGhSlGg~vA~~~a~~~p~--~v~~iv~Ldpa~ 180 (449)
T 1hpl_A 147 VHIIGHSLGSHAAGEAGRRTNG--AVGRITGLDPAE 180 (449)
T ss_dssp EEEEEETHHHHHHHHHHHHTTT--CSSEEEEESCBC
T ss_pred EEEEEECHhHHHHHHHHHhcch--hcceeeccCccc
Confidence 9999999999999999999988 899999998654
|
| >3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.23 E-value=7.1e-11 Score=126.70 Aligned_cols=111 Identities=21% Similarity=0.213 Sum_probs=80.7
Q ss_pred CCCcEEEEECCCCCCCccHHHH--HHHHHHH-hCCceEEEEeCCCCCCCCCCCCCC--------C-C-CCchHHHHHHHH
Q 008093 158 DTTPIAIVIPGLTSDSAASYIR--HLVFNTA-KRGWNVVVSNHRGLGGVSITSDCF--------Y-N-AGWTEDAREVIG 224 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~--~l~~~l~-~~Gy~Vvv~D~RG~G~S~~~~~~~--------~-~-~~~~~Dl~~~i~ 224 (578)
+..| |+++||..|+.. .+.. .....++ +.|++|+++|+||||.|....... + + ....+|+.++++
T Consensus 37 ~g~P-i~l~~Ggeg~~~-~~~~~~g~~~~lA~~~~~~Vi~~DhRg~G~S~p~~~~~~~~~~~l~~lt~~q~~~Dl~~~~~ 114 (446)
T 3n2z_B 37 NGGS-ILFYTGNEGDII-WFCNNTGFMWDVAEELKAMLVFAEHRYYGESLPFGDNSFKDSRHLNFLTSEQALADFAELIK 114 (446)
T ss_dssp TTCE-EEEEECCSSCHH-HHHHHCHHHHHHHHHHTEEEEEECCTTSTTCCTTGGGGGSCTTTSTTCSHHHHHHHHHHHHH
T ss_pred CCCC-EEEEeCCCCcch-hhhhcccHHHHHHHHhCCcEEEEecCCCCCCCCCCccccccchhhccCCHHHHHHHHHHHHH
Confidence 3456 667788766433 2221 1222333 348899999999999996432211 1 1 234589999999
Q ss_pred HHHHHC---CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcch
Q 008093 225 YLHHEY---PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (578)
Q Consensus 225 ~l~~~~---~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~ 272 (578)
+++.++ +..|++++||||||++++.++.++|+ .|.|+|+.++|...
T Consensus 115 ~l~~~~~~~~~~p~il~GhS~GG~lA~~~~~~yP~--~v~g~i~ssapv~~ 163 (446)
T 3n2z_B 115 HLKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPH--MVVGALAASAPIWQ 163 (446)
T ss_dssp HHHHHSTTGGGCCEEEEEETHHHHHHHHHHHHCTT--TCSEEEEETCCTTC
T ss_pred HHHHhcccCCCCCEEEEEeCHHHHHHHHHHHhhhc--cccEEEEeccchhc
Confidence 999876 56799999999999999999999999 89999998877643
|
| >1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A | Back alignment and structure |
|---|
Probab=99.23 E-value=4.6e-12 Score=136.26 Aligned_cols=110 Identities=13% Similarity=0.131 Sum_probs=81.7
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhC-CceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC--CCCc
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKR-GWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY--PKAP 234 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~-Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~--~~~~ 234 (578)
..+|+||++||++++....|...++..+.++ +|+|+++|+||+|.+.............+|+.++++++.+++ +..+
T Consensus 68 ~~~p~vvliHG~~~s~~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~y~~~~~~~~~~a~~l~~ll~~L~~~~g~~~~~ 147 (450)
T 1rp1_A 68 TDKKTRFIIHGFIDKGEENWLLDMCKNMFKVEEVNCICVDWKKGSQTSYTQAANNVRVVGAQVAQMLSMLSANYSYSPSQ 147 (450)
T ss_dssp TTSEEEEEECCCCCTTCTTHHHHHHHHHTTTCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred CCCCeEEEEccCCCCCCcchHHHHHHHHHhcCCeEEEEEeCccccCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCChhh
Confidence 5678999999997766545656567776654 899999999999876421111011123468888898886443 4568
Q ss_pred EEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 235 LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 235 i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
+++|||||||.+++.++...++ |.+++++++..
T Consensus 148 v~LVGhSlGg~vA~~~a~~~p~---v~~iv~Ldpa~ 180 (450)
T 1rp1_A 148 VQLIGHSLGAHVAGEAGSRTPG---LGRITGLDPVE 180 (450)
T ss_dssp EEEEEETHHHHHHHHHHHTSTT---CCEEEEESCCC
T ss_pred EEEEEECHhHHHHHHHHHhcCC---cccccccCccc
Confidence 9999999999999999988875 89999888654
|
| >1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=9.5e-10 Score=111.79 Aligned_cols=129 Identities=12% Similarity=0.116 Sum_probs=87.6
Q ss_pred eEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHH-----HHHHHHHHHhCC----ce
Q 008093 121 RRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASY-----IRHLVFNTAKRG----WN 191 (578)
Q Consensus 121 ~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~y-----i~~l~~~l~~~G----y~ 191 (578)
+...+...+| .+.+..+.|++- ..+...|+|+++||.+++...++ +..++..+.+.| |.
T Consensus 42 ~~~~~~s~~~-~~~~~vy~P~~~-----------~~~~~~Pvlv~lHG~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~i 109 (297)
T 1gkl_A 42 VKETYTGING-TKSLNVYLPYGY-----------DPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLI 109 (297)
T ss_dssp EEEEEEETTE-EEEEEEEECTTC-----------CTTSCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHTTSSCCEE
T ss_pred EEEEEEcCCC-EEEEEEEeCCCC-----------CCCCCCCEEEEECCCCCCcchhhcccchHHHHHHHHHHcCCCCCEE
Confidence 4455666665 777777776431 11245789999999865433221 356677777664 99
Q ss_pred EEEEeCCCCCCCCCCCCCCCCCCchHH-HHHHHHHHHHHCCC--------------CcEEEEEEchHHHHHHHHHhhcCC
Q 008093 192 VVVSNHRGLGGVSITSDCFYNAGWTED-AREVIGYLHHEYPK--------------APLFAIGTSIGANILVKYLGEEGE 256 (578)
Q Consensus 192 Vvv~D~RG~G~S~~~~~~~~~~~~~~D-l~~~i~~l~~~~~~--------------~~i~lvGhSmGG~ial~ya~~~p~ 256 (578)
|+++|.+|- +.. ...+.++ +.+++.++...++. .+++++|+||||.+++.++..+|+
T Consensus 110 vv~pd~~~~--~~~------~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~p~ 181 (297)
T 1gkl_A 110 VVTPTFNGG--NCT------AQNFYQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLD 181 (297)
T ss_dssp EEECCSCST--TCC------TTTHHHHHHHTHHHHHHHHSCSSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTT
T ss_pred EEEecCcCC--ccc------hHHHHHHHHHHHHHHHHHhCCccccccccccccCCccceEEEEECHHHHHHHHHHHhCch
Confidence 999998862 211 1112222 34566677666542 369999999999999999999998
Q ss_pred CCCccEEEEEcCCcc
Q 008093 257 KTPVAGAAAICSPWD 271 (578)
Q Consensus 257 ~~~V~~~Vlis~p~d 271 (578)
.+++++++++...
T Consensus 182 --~f~~~v~~sg~~~ 194 (297)
T 1gkl_A 182 --YVAYFMPLSGDYW 194 (297)
T ss_dssp --TCCEEEEESCCCC
T ss_pred --hhheeeEeccccc
Confidence 8999999987653
|
| >2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=5.3e-12 Score=135.68 Aligned_cols=112 Identities=18% Similarity=0.182 Sum_probs=83.9
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCc---eEEEEeCCCCCCC-----CCCCCC--------------------
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGW---NVVVSNHRGLGGV-----SITSDC-------------------- 209 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy---~Vvv~D~RG~G~S-----~~~~~~-------------------- 209 (578)
..+++|||+||+++ +...| ..++..|.++|| +|+++|+||||.| +.+...
T Consensus 20 ~~~ppVVLlHG~g~-s~~~w-~~la~~La~~Gy~~~~Via~DlpG~G~S~~~~~Dv~~~G~~~~~G~n~~p~id~~~l~~ 97 (484)
T 2zyr_A 20 EDFRPVVFVHGLAG-SAGQF-ESQGMRFAANGYPAEYVKTFEYDTISWALVVETDMLFSGLGSEFGLNISQIIDPETLDK 97 (484)
T ss_dssp -CCCCEEEECCTTC-CGGGG-HHHHHHHHHTTCCGGGEEEECCCHHHHHHHTTTSTTTTTGGGHHHHHHGGGSCHHHHHH
T ss_pred CCCCEEEEECCCCC-CHHHH-HHHHHHHHHcCCCcceEEEEECCCCCccccccccccccccccccccccccccccccccc
Confidence 45677999999965 44455 789999999999 8999999999975 110000
Q ss_pred -------CCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCC-CCCccEEEEEcCCcc
Q 008093 210 -------FYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGE-KTPVAGAAAICSPWD 271 (578)
Q Consensus 210 -------~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~-~~~V~~~Vlis~p~d 271 (578)
.......+|+.+.++.+.++++..+++++||||||.+++.|+.++++ ..+|+++|+++++++
T Consensus 98 v~~~~~~~~~~~~~~dla~~L~~ll~~lg~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVlIapp~~ 167 (484)
T 2zyr_A 98 ILSKSRERLIDETFSRLDRVIDEALAESGADKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLILLDGVWG 167 (484)
T ss_dssp HHTSCHHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEEESCCCS
T ss_pred cccccccCchhhhHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHHCccchhhhCEEEEECCccc
Confidence 00012236777778888777777899999999999999999998861 116999999999875
|
| >2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus} | Back alignment and structure |
|---|
Probab=99.03 E-value=3.8e-11 Score=128.16 Aligned_cols=113 Identities=15% Similarity=0.189 Sum_probs=75.9
Q ss_pred CCCcEEEEECCCCCCCc------cHHHH----HHHHHHHhCCceEEEEeCCCCCCCCCCCCC------------------
Q 008093 158 DTTPIAIVIPGLTSDSA------ASYIR----HLVFNTAKRGWNVVVSNHRGLGGVSITSDC------------------ 209 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~------~~yi~----~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~------------------ 209 (578)
..+++|||+||++|... ..|+. .+++.|.++||+|+++|+||||.|......
T Consensus 50 ~~~~pVVLvHG~~g~~~~~~~~~~~~W~~~~~~l~~~L~~~Gy~Via~Dl~G~G~S~~~~~~l~~~i~~g~g~sg~~~~~ 129 (431)
T 2hih_A 50 KNKDPFVFVHGFTGFVGEVAAKGENYWGGTKANLRNHLRKAGYETYEASVSALASNHERAVELYYYLKGGRVDYGAAHSE 129 (431)
T ss_dssp SCSSCEEEECCTTCCCGGGSCTTCCTTTTTTCCHHHHHHHTTCCEEEECCCSSSCHHHHHHHHHHHHHCEEEECCHHHHH
T ss_pred CCCCeEEEECCCCCCcccccccchhhhhccHHHHHHHHHhCCCEEEEEcCCCCCCCccchHHhhhhhhhccccccccccc
Confidence 45667999999977422 23333 478888899999999999999987421100
Q ss_pred -CCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhh--------------------------cCCCCCccE
Q 008093 210 -FYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGE--------------------------EGEKTPVAG 262 (578)
Q Consensus 210 -~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~--------------------------~p~~~~V~~ 262 (578)
.....+.+|+.++++.+. +..++++|||||||.++..++.. +++ +|.+
T Consensus 130 ~~~~~~~a~dl~~ll~~l~---~~~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p~--~V~s 204 (431)
T 2hih_A 130 KYGHERYGKTYEGVLKDWK---PGHPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQDN--MVTS 204 (431)
T ss_dssp HHTCCSEEEEECCSCTTCB---TTBCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCCCS--CEEE
T ss_pred cCCHHHHHHHHHHHHHHhC---CCCCEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccCccc--ceeE
Confidence 001122233333333221 23689999999999999988765 344 7999
Q ss_pred EEEEcCCcchhhh
Q 008093 263 AAAICSPWDLLIG 275 (578)
Q Consensus 263 ~Vlis~p~d~~~~ 275 (578)
+|++++|......
T Consensus 205 lv~i~tP~~Gs~~ 217 (431)
T 2hih_A 205 ITTIATPHNGTHA 217 (431)
T ss_dssp EEEESCCTTCCHH
T ss_pred EEEECCCCCCchH
Confidence 9999998765443
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 | Back alignment and structure |
|---|
Probab=99.02 E-value=8.8e-10 Score=97.44 Aligned_cols=82 Identities=7% Similarity=0.113 Sum_probs=56.6
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEE
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIG 239 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG 239 (578)
+|+||++| ++. ..| ..+ +. .+|+|+++|+||||.|...... .+++.+.+..+.+..+..+++++|
T Consensus 22 ~~~vv~~H---~~~-~~~-~~~---l~-~~~~v~~~d~~G~G~s~~~~~~------~~~~~~~~~~~~~~~~~~~~~lvG 86 (131)
T 2dst_A 22 GPPVLLVA---EEA-SRW-PEA---LP-EGYAFYLLDLPGYGRTEGPRMA------PEELAHFVAGFAVMMNLGAPWVLL 86 (131)
T ss_dssp SSEEEEES---SSG-GGC-CSC---CC-TTSEEEEECCTTSTTCCCCCCC------HHHHHHHHHHHHHHTTCCSCEEEE
T ss_pred CCeEEEEc---CCH-HHH-HHH---Hh-CCcEEEEECCCCCCCCCCCCCC------HHHHHHHHHHHHHHcCCCccEEEE
Confidence 46799999 222 233 222 44 4699999999999998765332 333333333333344556899999
Q ss_pred EchHHHHHHHHHhhcCC
Q 008093 240 TSIGANILVKYLGEEGE 256 (578)
Q Consensus 240 hSmGG~ial~ya~~~p~ 256 (578)
|||||.+++.++.++|.
T Consensus 87 ~S~Gg~~a~~~a~~~p~ 103 (131)
T 2dst_A 87 RGLGLALGPHLEALGLR 103 (131)
T ss_dssp CGGGGGGHHHHHHTTCC
T ss_pred EChHHHHHHHHHhcCCc
Confidence 99999999999998764
|
| >2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A | Back alignment and structure |
|---|
Probab=98.98 E-value=5.3e-10 Score=117.68 Aligned_cols=109 Identities=12% Similarity=0.017 Sum_probs=73.7
Q ss_pred CCCcEEEEECCCCCCCcc-----HHHH----HHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHH---
Q 008093 158 DTTPIAIVIPGLTSDSAA-----SYIR----HLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGY--- 225 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~-----~yi~----~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~--- 225 (578)
.++++|||+||+.|+... .|+. .+++.|.++||+|+++|+||+|.+.. ...++.+.++.
T Consensus 4 ~~~~pVVLvHG~~g~~~~~~~~~~yW~~~~~~la~~L~~~G~~Via~Dl~g~G~s~~---------~a~~l~~~i~~~~v 74 (387)
T 2dsn_A 4 ANDAPIVLLHGFTGWGREEMFGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPLSSNWD---------RACEAYAQLVGGTV 74 (387)
T ss_dssp CCCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEEECCCSSBCHHH---------HHHHHHHHHHCEEE
T ss_pred CCCCcEEEECCCCCCCcccccccchhhhhhHHHHHHHHHCCCEEEEecCCCCCCccc---------cHHHHHHHHHhhhh
Confidence 345669999999775432 1223 45588888999999999999997631 11233333321
Q ss_pred -----HH-----------------HHCCCCcEEEEEEchHHHHHHHHHhh-------------------cC----CCCCc
Q 008093 226 -----LH-----------------HEYPKAPLFAIGTSIGANILVKYLGE-------------------EG----EKTPV 260 (578)
Q Consensus 226 -----l~-----------------~~~~~~~i~lvGhSmGG~ial~ya~~-------------------~p----~~~~V 260 (578)
+. ...+..++++|||||||.++..++.. +| ...+|
T Consensus 75 Dy~~~~a~~~~~~~~~~~l~~ll~~~~~~~kv~LVGHSmGG~va~~~a~~l~~~~~~e~~~~~~~~~~~~P~~~g~~~~V 154 (387)
T 2dsn_A 75 DYGAAHAAKHGHARFGRTYPGLLPELKRGGRIHIIAHSQGGQTARMLVSLLENGSQEEREYAKAHNVSLSPLFEGGHHFV 154 (387)
T ss_dssp ECCHHHHHHHTSCSEEEEECCSCGGGGTTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCE
T ss_pred hhhhhhhhhccchhhhhhHHHHHHHhcCCCceEEEEECHHHHHHHHHHHHhccccccccccccccccccCccccccccce
Confidence 11 11345789999999999999999872 12 01279
Q ss_pred cEEEEEcCCcchhhh
Q 008093 261 AGAAAICSPWDLLIG 275 (578)
Q Consensus 261 ~~~Vlis~p~d~~~~ 275 (578)
.++|++++|......
T Consensus 155 ~sLV~i~tP~~Gs~~ 169 (387)
T 2dsn_A 155 LSVTTIATPHDGTTL 169 (387)
T ss_dssp EEEEEESCCTTCCGG
T ss_pred eEEEEECCCCCCcHH
Confidence 999999998765443
|
| >2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=98.84 E-value=8.2e-09 Score=103.32 Aligned_cols=139 Identities=10% Similarity=0.026 Sum_probs=84.2
Q ss_pred CeeEEEEEec-CCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCC-CccHHHHHHHHHHHhCC---ceEE
Q 008093 119 SYRRQLFRLS-DGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSD-SAASYIRHLVFNTAKRG---WNVV 193 (578)
Q Consensus 119 ~y~r~~l~~~-DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~-s~~~yi~~l~~~l~~~G---y~Vv 193 (578)
..+...+..+ +|..+.+..+.|++- ..+..-|+|+++||.... ....+.+.+.....+.| +.|+
T Consensus 17 ~~~~~~~~s~~~g~~~~~~v~~P~~~-----------~~~~~~Pvl~~lhG~~~~~~~~~~~~~~~~~~~~~g~~~~ivV 85 (275)
T 2qm0_A 17 NTEQWKMYSKLEGKEYQIHISKPKQP-----------APDSGYPVIYVLDGNAFFQTFHEAVKIQSVRAEKTGVSPAIIV 85 (275)
T ss_dssp TEEEEEEECTTTCCEEEEEEECCSSC-----------CCTTCEEEEEEESHHHHHHHHHHHHHHHGGGHHHHCCCCCEEE
T ss_pred CceEEEEEecCCCCEEEEEEECCCCC-----------CCCCCccEEEEecChHHHHHHHHHHHHHhhcchhcCCCCeEEE
Confidence 3455556665 688888888877541 112456999999996310 01112121111123457 9999
Q ss_pred EEeCCCCCC----------CCCCCCC-C---------CCCC----chHHH-HHHHHHHHHHCCC--CcEEEEEEchHHHH
Q 008093 194 VSNHRGLGG----------VSITSDC-F---------YNAG----WTEDA-REVIGYLHHEYPK--APLFAIGTSIGANI 246 (578)
Q Consensus 194 v~D~RG~G~----------S~~~~~~-~---------~~~~----~~~Dl-~~~i~~l~~~~~~--~~i~lvGhSmGG~i 246 (578)
.+|+||.+. ++..... . ...+ +.+.+ .+++.++.++++. .+++++||||||.+
T Consensus 86 ~i~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~l~~~i~~~~~~~~~~~~~~G~S~GG~~ 165 (275)
T 2qm0_A 86 GVGYPIEGAFSGEERCYDFTPSVISKDAPLKPDGKPWPKTGGAHNFFTFIEEELKPQIEKNFEIDKGKQTLFGHXLGGLF 165 (275)
T ss_dssp EEECSCSSSCCHHHHHHHHCSSCCCC---------CCCCCCCHHHHHHHHHHTHHHHHHHHSCEEEEEEEEEEETHHHHH
T ss_pred EECCCCCCcCcccccccccCCCCccccCCccccCCcCCCCCChHHHHHHHHHHHHHHHHhhccCCCCCCEEEEecchhHH
Confidence 999987321 1110000 0 0111 11222 3456667777752 57999999999999
Q ss_pred HHHHHhhcCCCCCccEEEEEcCCc
Q 008093 247 LVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 247 al~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
++.++..+++ .+++++++++..
T Consensus 166 a~~~~~~~p~--~f~~~~~~s~~~ 187 (275)
T 2qm0_A 166 ALHILFTNLN--AFQNYFISSPSI 187 (275)
T ss_dssp HHHHHHHCGG--GCSEEEEESCCT
T ss_pred HHHHHHhCch--hhceeEEeCcee
Confidence 9999999888 799999988764
|
| >3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A* | Back alignment and structure |
|---|
Probab=98.80 E-value=8.2e-09 Score=109.58 Aligned_cols=134 Identities=10% Similarity=-0.003 Sum_probs=85.7
Q ss_pred eeEEEEEec-CCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCce----EEE
Q 008093 120 YRRQLFRLS-DGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWN----VVV 194 (578)
Q Consensus 120 y~r~~l~~~-DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~----Vvv 194 (578)
.++..+..+ .|....+..+.|++. .+...|+|+++||........+ ..++..|.++|+. |++
T Consensus 168 v~~~~~~S~~~g~~~~~~vy~P~~~------------~~~~~PvlvllHG~~~~~~~~~-~~~~~~l~~~g~~~p~iVV~ 234 (403)
T 3c8d_A 168 AKEIIWKSERLKNSRRVWIFTTGDV------------TAEERPLAVLLDGEFWAQSMPV-WPVLTSLTHRQQLPPAVYVL 234 (403)
T ss_dssp CEEEEEEETTTTEEEEEEEEEC-----------------CCCCEEEESSHHHHHHTSCC-HHHHHHHHHTTSSCSCEEEE
T ss_pred eEEEEEEccccCCcEEEEEEeCCCC------------CCCCCCEEEEeCCHHHhhcCcH-HHHHHHHHHcCCCCCeEEEE
Confidence 344555544 577778777776431 1246799999999411000011 3456777777875 999
Q ss_pred EeCCCCC-CCCCCCCCCCCCCchHHH-HHHHHHHHHHCCC----CcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcC
Q 008093 195 SNHRGLG-GVSITSDCFYNAGWTEDA-REVIGYLHHEYPK----APLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICS 268 (578)
Q Consensus 195 ~D~RG~G-~S~~~~~~~~~~~~~~Dl-~~~i~~l~~~~~~----~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~ 268 (578)
+|++|++ ++... .....+.+.+ .+++.++.++++. .+++++|+||||++++.++..+++ .+.+++++++
T Consensus 235 ~d~~~~~~r~~~~---~~~~~~~~~l~~el~~~i~~~~~~~~d~~~~~l~G~S~GG~~al~~a~~~p~--~f~~~~~~sg 309 (403)
T 3c8d_A 235 IDAIDTTHRAHEL---PCNADFWLAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPE--RFGCVLSQSG 309 (403)
T ss_dssp ECCCSHHHHHHHS---SSCHHHHHHHHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTT--TCCEEEEESC
T ss_pred ECCCCCccccccC---CChHHHHHHHHHHHHHHHHHHCCCCCCCCceEEEEECHHHHHHHHHHHhCch--hhcEEEEecc
Confidence 9998732 11100 0111122232 4677888887752 479999999999999999999998 8999999987
Q ss_pred Ccc
Q 008093 269 PWD 271 (578)
Q Consensus 269 p~d 271 (578)
.++
T Consensus 310 ~~~ 312 (403)
T 3c8d_A 310 SYW 312 (403)
T ss_dssp CTT
T ss_pred ccc
Confidence 653
|
| >2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.68 E-value=1e-07 Score=97.26 Aligned_cols=96 Identities=9% Similarity=0.105 Sum_probs=62.6
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHH-HHHHHHHHHHCCCCcEEE
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDA-REVIGYLHHEYPKAPLFA 237 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl-~~~i~~l~~~~~~~~i~l 237 (578)
.++.++++||.+|+ ...| ..++..+. ++|+++|++| .. + . .. .+++ .++++.+....+..++++
T Consensus 45 ~~~~l~~~hg~~g~-~~~~-~~~~~~l~---~~v~~~~~~~--~~----~-~--~~-~~~~a~~~~~~i~~~~~~~~~~l 109 (316)
T 2px6_A 45 SERPLFLVHPIEGS-TTVF-HSLASRLS---IPTYGLQCTR--AA----P-L--DS-IHSLAAYYIDCIRQVQPEGPYRV 109 (316)
T ss_dssp SSCCEEEECCTTCC-SGGG-HHHHHHCS---SCEEEECCCT--TS----C-T--TC-HHHHHHHHHHHHTTTCSSCCCEE
T ss_pred CCCeEEEECCCCCC-HHHH-HHHHHhcC---CCEEEEECCC--CC----C-c--CC-HHHHHHHHHHHHHHhCCCCCEEE
Confidence 45669999999654 4455 56666663 9999999993 11 1 1 11 2333 333444444334578999
Q ss_pred EEEchHHHHHHHHHhhcCC-CCC---ccEEEEEcCC
Q 008093 238 IGTSIGANILVKYLGEEGE-KTP---VAGAAAICSP 269 (578)
Q Consensus 238 vGhSmGG~ial~ya~~~p~-~~~---V~~~Vlis~p 269 (578)
+||||||.++..++.+.+. ... +.+++++++.
T Consensus 110 ~G~S~Gg~va~~~a~~l~~~g~~~p~v~~l~li~~~ 145 (316)
T 2px6_A 110 AGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGS 145 (316)
T ss_dssp EEETHHHHHHHHHHHHHHHHC---CCCCEEEEESCS
T ss_pred EEECHHHHHHHHHHHHHHHcCCcccccceEEEEcCC
Confidence 9999999999999876531 014 8889988764
|
| >1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A | Back alignment and structure |
|---|
Probab=98.45 E-value=2.6e-07 Score=100.44 Aligned_cols=110 Identities=15% Similarity=0.103 Sum_probs=74.2
Q ss_pred CCcEEEEECCCC---CCCccHHHHHHHHHHHhC-CceEEEEeCC----CCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC
Q 008093 159 TTPIAIVIPGLT---SDSAASYIRHLVFNTAKR-GWNVVVSNHR----GLGGVSITSDCFYNAGWTEDAREVIGYLHHEY 230 (578)
Q Consensus 159 ~~PiVVllHGl~---G~s~~~yi~~l~~~l~~~-Gy~Vvv~D~R----G~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~ 230 (578)
..|+||++||.+ |+..... .....++++ |+.|+.+|+| |++.+...........-..|..++++++++..
T Consensus 96 ~~PviV~iHGGg~~~g~~~~~~--~~~~~la~~g~~vvv~~nYRlg~~Gf~~~~~~~~~~~~n~gl~D~~~al~wv~~~i 173 (489)
T 1qe3_A 96 NLPVMVWIHGGAFYLGAGSEPL--YDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEAYSDNLGLLDQAAALKWVRENI 173 (489)
T ss_dssp SEEEEEEECCSTTTSCCTTSGG--GCCHHHHHHHTCEEEEECCCCHHHHSCCCTTTCTTSCSCHHHHHHHHHHHHHHHHG
T ss_pred CCCEEEEECCCccccCCCCCcc--cCHHHHHhcCCEEEEecCccCcccccCccccccccCCCCcchHHHHHHHHHHHHHH
Confidence 379999999942 3333211 124455555 4999999999 56554322111111223579999999998753
Q ss_pred -----CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 231 -----PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 231 -----~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
+..+|.++|+|+||.+++.++........++++|+.+++.
T Consensus 174 ~~fggDp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 218 (489)
T 1qe3_A 174 SAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGAS 218 (489)
T ss_dssp GGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCC
T ss_pred HHhCCCcceeEEEEechHHHHHHHHHhCccccchHHHHHHhCCCC
Confidence 2357999999999999988877643323799999999866
|
| >2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A | Back alignment and structure |
|---|
Probab=98.44 E-value=5.6e-07 Score=98.08 Aligned_cols=112 Identities=17% Similarity=0.092 Sum_probs=78.4
Q ss_pred CCCcEEEEECCCC---CCCccHHHHHHHHHHHhCC-ceEEEEeCC----CCCCCCCCCCCCCC---CCchHHHHHHHHHH
Q 008093 158 DTTPIAIVIPGLT---SDSAASYIRHLVFNTAKRG-WNVVVSNHR----GLGGVSITSDCFYN---AGWTEDAREVIGYL 226 (578)
Q Consensus 158 ~~~PiVVllHGl~---G~s~~~yi~~l~~~l~~~G-y~Vvv~D~R----G~G~S~~~~~~~~~---~~~~~Dl~~~i~~l 226 (578)
...|+||++||.+ |+..... .....|+++| +.|+.+||| |++.++........ ..-..|..++++++
T Consensus 97 ~~~Pviv~iHGGg~~~g~~~~~~--~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~~~~~~n~gl~D~~~al~wv 174 (498)
T 2ogt_A 97 KKRPVLFWIHGGAFLFGSGSSPW--YDGTAFAKHGDVVVVTINYRMNVFGFLHLGDSFGEAYAQAGNLGILDQVAALRWV 174 (498)
T ss_dssp CCEEEEEEECCSTTTSCCTTCGG--GCCHHHHHHHTCEEEEECCCCHHHHCCCCTTTTCGGGTTGGGHHHHHHHHHHHHH
T ss_pred CCCcEEEEEcCCccCCCCCCCCc--CCHHHHHhCCCEEEEeCCCcCchhhccCchhhccccccCCCCcccHHHHHHHHHH
Confidence 4579999999964 3333211 1245566655 999999999 88876543221111 12247999999999
Q ss_pred HHHC-----CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcc
Q 008093 227 HHEY-----PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (578)
Q Consensus 227 ~~~~-----~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d 271 (578)
++.. +..+|.++|+|.||.+++.++........++++|+.+++..
T Consensus 175 ~~~i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~ 224 (498)
T 2ogt_A 175 KENIAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAMLQSGSGS 224 (498)
T ss_dssp HHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred HHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcccccchhheeeeccCCcc
Confidence 8762 24579999999999999888776543337999999998765
|
| >4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A* | Back alignment and structure |
|---|
Probab=98.30 E-value=1.7e-05 Score=83.04 Aligned_cols=100 Identities=17% Similarity=0.056 Sum_probs=67.2
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeC-----------CCCCCCC-CCC-CCCCC--CCchHHHHHH
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH-----------RGLGGVS-ITS-DCFYN--AGWTEDAREV 222 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~-----------RG~G~S~-~~~-~~~~~--~~~~~Dl~~~ 222 (578)
.+.|+||.+||. +- ...+||.++.+|. ||.|.-- ... ..... ..|..|+..+
T Consensus 136 ~P~Pvii~~~~~--~~-----------~~~~G~A~i~f~~~~va~d~~~gsrG~g~f~~ly~~~~~~gal~aWAWg~~ra 202 (433)
T 4g4g_A 136 GPFPAIIGIGGA--SI-----------PIPSNVATITFNNDEFGAQMGSGSRGQGKFYDLFGRDHSAGSLTAWAWGVDRL 202 (433)
T ss_dssp CCEEEEEEESCC--CS-----------CCCTTSEEEEECHHHHSCCSSGGGTTCSHHHHHHCTTCSCCHHHHHHHHHHHH
T ss_pred CCccEEEEECCC--cc-----------ccCCCeEEEEeCCcccccccCCCcCCccccccccCCccchHHHHHHHHhHHHH
Confidence 445788888873 11 1467999999997 3333200 000 00000 1345689999
Q ss_pred HHHHHH----HC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchh
Q 008093 223 IGYLHH----EY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL 273 (578)
Q Consensus 223 i~~l~~----~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~ 273 (578)
++++.. +- +..+|.++|||+||..++..++..+ +|+++|..++..+..
T Consensus 203 iDyL~~~~~~~~~VD~~RIgv~G~S~gG~~Al~aaA~D~---Ri~~vi~~~sg~~G~ 256 (433)
T 4g4g_A 203 IDGLEQVGAQASGIDTKRLGVTGCSRNGKGAFITGALVD---RIALTIPQESGAGGA 256 (433)
T ss_dssp HHHHHHHCHHHHCEEEEEEEEEEETHHHHHHHHHHHHCT---TCSEEEEESCCTTTT
T ss_pred HHHHHhccccCCCcChhHEEEEEeCCCcHHHHHHHhcCC---ceEEEEEecCCCCch
Confidence 999987 32 3468999999999999998888775 599999998755443
|
| >2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A* | Back alignment and structure |
|---|
Probab=98.11 E-value=3.2e-06 Score=84.73 Aligned_cols=134 Identities=10% Similarity=-0.014 Sum_probs=75.3
Q ss_pred eeEEEEEecC-CcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHh-CCceEEEEeC
Q 008093 120 YRRQLFRLSD-GGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAK-RGWNVVVSNH 197 (578)
Q Consensus 120 y~r~~l~~~D-G~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~-~Gy~Vvv~D~ 197 (578)
.+...+..++ |..+.+..+.|++- ..+..-|+|+++||... ... ....+...+.+ .+.-||++++
T Consensus 13 ~~~~~~~S~~~~~~~~~~vylP~~y-----------~~~~~yPvly~l~G~~~-~~~-~~~~~~~~l~~~~~~ivV~v~~ 79 (278)
T 2gzs_A 13 FSATSFDSVDGTRHYRVWTAVPNTT-----------APASGYPILYMLDGNAV-MDR-LDDELLKQLSEKTPPVIVAVGY 79 (278)
T ss_dssp EEEEEEECTTSSCEEEEEEEEESSC-----------CCTTCEEEEEESSHHHH-HHH-CCHHHHHHHTTSCCCEEEEEEE
T ss_pred eEEEEEEcCCCCceEEEEEECCCCC-----------CCCCCCCEEEEeeChhH-HHH-HHHHHHHHhccCCCeEEEEEcC
Confidence 3445566665 56777777766441 11234577777777421 000 00123344544 5677888888
Q ss_pred CCCC----------CCCCCC---CC------CCCCCchHHHHH-----HHHHHHHHCCC--CcEEEEEEchHHHHHHHHH
Q 008093 198 RGLG----------GVSITS---DC------FYNAGWTEDARE-----VIGYLHHEYPK--APLFAIGTSIGANILVKYL 251 (578)
Q Consensus 198 RG~G----------~S~~~~---~~------~~~~~~~~Dl~~-----~i~~l~~~~~~--~~i~lvGhSmGG~ial~ya 251 (578)
++-. .++... +. ....+..+++.+ ++.++.++++. .+++++||||||.+++.++
T Consensus 80 ~~~~~~~~~~R~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~i~~~~~~~~~r~~i~G~S~GG~~a~~~~ 159 (278)
T 2gzs_A 80 QTNLPFDLNSRAYDYTPAAESRKTDLHSGRFSRKSGGSNNFRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGLFVLDSW 159 (278)
T ss_dssp SSSSSCCHHHHHHHTCCGGGGTTCSCC-----CCCCCHHHHHHHHHHTHHHHHTTTSCEEEEEEEEEEETHHHHHHHHHH
T ss_pred CCCCcCcccccccccCCCCccccccccccCcCCCcCCHHHHHHHHHHHHHHHHHHhccCCCCceEEEEECHHHHHHHHHH
Confidence 7521 111100 00 001122233322 33345555542 3699999999999999999
Q ss_pred hhcCCCCCccEEEEEcCC
Q 008093 252 GEEGEKTPVAGAAAICSP 269 (578)
Q Consensus 252 ~~~p~~~~V~~~Vlis~p 269 (578)
.. |+ .+.+++++++.
T Consensus 160 ~~-p~--~f~~~~~~s~~ 174 (278)
T 2gzs_A 160 LS-SS--YFRSYYSASPS 174 (278)
T ss_dssp HH-CS--SCSEEEEESGG
T ss_pred hC-cc--ccCeEEEeCcc
Confidence 99 88 89999988764
|
| >3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=98.10 E-value=1.5e-05 Score=82.44 Aligned_cols=99 Identities=16% Similarity=0.024 Sum_probs=66.2
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeC--------C---CCCCCC-CCC-CCCC--CCCchHHHHHH
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH--------R---GLGGVS-ITS-DCFY--NAGWTEDAREV 222 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~--------R---G~G~S~-~~~-~~~~--~~~~~~Dl~~~ 222 (578)
.+-|+||-+||.. - ...+||.++.+|. | |+|.-. ... .... ...|..|+..+
T Consensus 104 ~p~Pvii~i~~~~--~-----------~~~~G~a~~~~~~~~v~~~~~~gs~g~g~f~~ly~~~~~~gal~awaWg~~ra 170 (375)
T 3pic_A 104 APYPAIIGYGGGS--L-----------PAPAGVAMINFNNDNIAAQVNTGSRGQGKFYDLYGSSHSAGAMTAWAWGVSRV 170 (375)
T ss_dssp SSEEEEEEETTCS--S-----------CCCTTCEEEEECHHHHSCCSSGGGTTCSHHHHHHCTTCSCCHHHHHHHHHHHH
T ss_pred CCccEEEEECCCc--c-----------ccCCCeEEEEecccccccccCCCCccceecccccCCccchHHHHHHHHHHHHH
Confidence 3457788888831 1 1357999999986 2 333210 000 0000 01345699999
Q ss_pred HHHHHHHC----CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcch
Q 008093 223 IGYLHHEY----PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (578)
Q Consensus 223 i~~l~~~~----~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~ 272 (578)
++++..+- +..+|.++|||+||..++..++..+ +|+++|..++..+.
T Consensus 171 id~L~~~~~~~VD~~RIgv~G~S~gG~~al~~aA~D~---Ri~~~v~~~~g~~G 221 (375)
T 3pic_A 171 IDALELVPGARIDTTKIGVTGCSRNGKGAMVAGAFEK---RIVLTLPQESGAGG 221 (375)
T ss_dssp HHHHHHCGGGCEEEEEEEEEEETHHHHHHHHHHHHCT---TEEEEEEESCCTTT
T ss_pred HHHHHhCCccCcChhhEEEEEeCCccHHHHHHHhcCC---ceEEEEeccCCCCc
Confidence 99998752 2368999999999999998888775 69999998865544
|
| >4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A* | Back alignment and structure |
|---|
Probab=98.08 E-value=9.1e-05 Score=75.09 Aligned_cols=137 Identities=13% Similarity=0.137 Sum_probs=76.3
Q ss_pred CCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHH--HHHHHHhCCceEEEEeCCCCCCC--C
Q 008093 129 DGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRH--LVFNTAKRGWNVVVSNHRGLGGV--S 204 (578)
Q Consensus 129 DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~--l~~~l~~~Gy~Vvv~D~RG~G~S--~ 204 (578)
-|....+..+.|++-.. ...+.+..-|+|.++||+++ ..+.|+.. ..+.+.+.|..++..|-.-.+-. .
T Consensus 24 l~~~~~~~VyLPp~y~~------~~~~~~~~~PVLYlLhG~~~-~~~~w~~~~~~~~~~~~~~~~~v~p~~~p~~~~~~~ 96 (299)
T 4fol_A 24 TKTSMNVNIYLPKHYYA------QDFPRNKRIPTVFYLSGLTC-TPDNASEKAFWQFQADKYGFAIVFPDTSPRGDEVAN 96 (299)
T ss_dssp TSSEEEEEEEECGGGGC------C------CBCEEEEECCTTC-CHHHHHHHSCHHHHHHHHTCEEEEECSSCCSTTSCC
T ss_pred cCCceEEEEEcCCCCCc------cccccCCCcCEEEEECCCCC-ChHHHHHhchHhHHHHHcCchhhccCCCcceeecCC
Confidence 35666666666643100 00011234699999999965 55556432 33455667888998875322110 0
Q ss_pred C--------CCCCCCC----------CCchHH-HHHHHHHHHHHCCC---------CcEEEEEEchHHHHHHHHHhhcCC
Q 008093 205 I--------TSDCFYN----------AGWTED-AREVIGYLHHEYPK---------APLFAIGTSIGANILVKYLGEEGE 256 (578)
Q Consensus 205 ~--------~~~~~~~----------~~~~~D-l~~~i~~l~~~~~~---------~~i~lvGhSmGG~ial~ya~~~p~ 256 (578)
. .....|. ..+.+. +.+++.++.+.++. .+..+.||||||.-++.++.+++.
T Consensus 97 ~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~~l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~SMGG~gAl~~al~~~~ 176 (299)
T 4fol_A 97 DPEGSWDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGISMGGYGAICGYLKGYS 176 (299)
T ss_dssp CTTCCSSSBTTBCTTCBCCSHHHHTTCBHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEBTHHHHHHHHHHHHTGG
T ss_pred CcccccccccCCccccccccCccccCccHHHHHHHHhHHHHHHhcccccccccccccceEEEecCchHHHHHHHHHhCCC
Confidence 0 0001111 011111 23566666666642 358999999999999999988643
Q ss_pred CCCccEEEEEcCCcch
Q 008093 257 KTPVAGAAAICSPWDL 272 (578)
Q Consensus 257 ~~~V~~~Vlis~p~d~ 272 (578)
.....++.+.++..+.
T Consensus 177 ~~~~~~~~s~s~~~~p 192 (299)
T 4fol_A 177 GKRYKSCSAFAPIVNP 192 (299)
T ss_dssp GTCCSEEEEESCCCCG
T ss_pred CCceEEEEecccccCc
Confidence 2267777777766554
|
| >2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A* | Back alignment and structure |
|---|
Probab=98.05 E-value=5.6e-06 Score=91.09 Aligned_cols=110 Identities=15% Similarity=0.067 Sum_probs=72.4
Q ss_pred CCCcEEEEECCCC--CCCccHHHHHHHHHHHhCCceEEEEeCC----CCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC-
Q 008093 158 DTTPIAIVIPGLT--SDSAASYIRHLVFNTAKRGWNVVVSNHR----GLGGVSITSDCFYNAGWTEDAREVIGYLHHEY- 230 (578)
Q Consensus 158 ~~~PiVVllHGl~--G~s~~~yi~~l~~~l~~~Gy~Vvv~D~R----G~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~- 230 (578)
...|+||++||-+ .++...| .. ...+.+.|+.|+.+||| |++.+... ......-..|..++++++++..
T Consensus 113 ~~~Pv~v~iHGG~~~~g~~~~~-~~-~~la~~~g~vvv~~nYRlg~~gf~~~~~~--~~~~n~gl~D~~~al~wv~~ni~ 188 (542)
T 2h7c_A 113 NRLPVMVWIHGGGLMVGAASTY-DG-LALAAHENVVVVTIQYRLGIWGFFSTGDE--HSRGNWGHLDQVAALRWVQDNIA 188 (542)
T ss_dssp CCEEEEEEECCSTTTSCCSTTS-CC-HHHHHHHTCEEEEECCCCHHHHHCCCSST--TCCCCHHHHHHHHHHHHHHHHGG
T ss_pred CCCCEEEEECCCcccCCCcccc-CH-HHHHhcCCEEEEecCCCCccccCCCCCcc--cCccchhHHHHHHHHHHHHHHHH
Confidence 4579999999932 1222223 11 12233479999999999 44433211 1111122479999999998752
Q ss_pred --C--CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcc
Q 008093 231 --P--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (578)
Q Consensus 231 --~--~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d 271 (578)
+ ..+|.++|+|.||.++..++........++++|+.++...
T Consensus 189 ~fggDp~~Vtl~G~SaGg~~~~~~~~~~~~~~lf~~ai~~Sg~~~ 233 (542)
T 2h7c_A 189 SFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAL 233 (542)
T ss_dssp GGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred HcCCCccceEEEEechHHHHHHHHHhhhhhhHHHHHHhhhcCCcc
Confidence 2 3589999999999999988776422237999999987543
|
| >2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI} | Back alignment and structure |
|---|
Probab=98.04 E-value=3.1e-06 Score=93.31 Aligned_cols=105 Identities=11% Similarity=0.055 Sum_probs=72.2
Q ss_pred CcEEEEECCC---CCCCcc-HHHHHHHHHHHhCCceEEEEeCCC----CCCCCCCCCCCCCCCchHHHHHHHHHHHHH--
Q 008093 160 TPIAIVIPGL---TSDSAA-SYIRHLVFNTAKRGWNVVVSNHRG----LGGVSITSDCFYNAGWTEDAREVIGYLHHE-- 229 (578)
Q Consensus 160 ~PiVVllHGl---~G~s~~-~yi~~l~~~l~~~Gy~Vvv~D~RG----~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~-- 229 (578)
.|+||++||- .|+... .| ....+++.|+.|+.+|+|. +..++. .......-..|..++++++++.
T Consensus 115 ~Pviv~iHGGg~~~g~~~~~~~---~~~~l~~~g~vvv~~nYRl~~~Gf~~~~~--~~~~~n~gl~D~~~al~wv~~~i~ 189 (551)
T 2fj0_A 115 LPVLVFIHGGGFAFGSGDSDLH---GPEYLVSKDVIVITFNYRLNVYGFLSLNS--TSVPGNAGLRDMVTLLKWVQRNAH 189 (551)
T ss_dssp EEEEEEECCSTTTSCCSCTTTC---BCTTGGGGSCEEEEECCCCHHHHHCCCSS--SSCCSCHHHHHHHHHHHHHHHHTG
T ss_pred CCEEEEEcCCccccCCCccccc---CHHHHHhCCeEEEEeCCcCCccccccCcc--cCCCCchhHHHHHHHHHHHHHHHH
Confidence 6999999992 233332 22 3455677899999999995 222211 1111112358999999999876
Q ss_pred -C--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCC
Q 008093 230 -Y--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSP 269 (578)
Q Consensus 230 -~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p 269 (578)
+ +..+|.++|+|.||.+++.++........++++|+.++.
T Consensus 190 ~fggDp~~v~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~ 232 (551)
T 2fj0_A 190 FFGGRPDDVTLMGQSAGAAATHILSLSKAADGLFRRAILMSGT 232 (551)
T ss_dssp GGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCC
T ss_pred HhCCChhhEEEEEEChHHhhhhccccCchhhhhhhheeeecCC
Confidence 2 245799999999999999887664332379999999874
|
| >2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ... | Back alignment and structure |
|---|
Probab=98.01 E-value=6.5e-06 Score=90.57 Aligned_cols=108 Identities=18% Similarity=0.080 Sum_probs=71.1
Q ss_pred CCCcEEEEECCCC---CCCcc-HHHHHHHHHHHh-CCceEEEEeCC----CCCCCCCCCCCCCCCCchHHHHHHHHHHHH
Q 008093 158 DTTPIAIVIPGLT---SDSAA-SYIRHLVFNTAK-RGWNVVVSNHR----GLGGVSITSDCFYNAGWTEDAREVIGYLHH 228 (578)
Q Consensus 158 ~~~PiVVllHGl~---G~s~~-~yi~~l~~~l~~-~Gy~Vvv~D~R----G~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~ 228 (578)
...|+||++||-+ |+... .| ....+++ .|+.|+.+||| |++.++.. +......-..|..++++++++
T Consensus 110 ~~~Pviv~iHGGg~~~g~~~~~~~---~~~~la~~~g~vvv~~nYRlg~~Gf~~~~~~-~~~~~n~gl~D~~~al~wv~~ 185 (543)
T 2ha2_A 110 SPTPVLIWIYGGGFYSGAASLDVY---DGRFLAQVEGAVLVSMNYRVGTFGFLALPGS-REAPGNVGLLDQRLALQWVQE 185 (543)
T ss_dssp SCEEEEEEECCSTTTCCCTTSGGG---CTHHHHHHHCCEEEEECCCCHHHHHCCCTTC-SSCCSCHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCccccCCCCCCcC---ChHHHHhcCCEEEEEecccccccccccCCCC-CCCCCcccHHHHHHHHHHHHH
Confidence 3459999999942 32221 23 2234443 79999999999 34443211 111111235899999999987
Q ss_pred HC-----CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCC
Q 008093 229 EY-----PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSP 269 (578)
Q Consensus 229 ~~-----~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p 269 (578)
.. +..+|.++|+|.||.+++..+........++++|+.++.
T Consensus 186 ~i~~fggDp~~v~i~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~ 231 (543)
T 2ha2_A 186 NIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGT 231 (543)
T ss_dssp HGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCC
T ss_pred HHHHhCCChhheEEEeechHHHHHHHHHhCcccHHhHhhheeccCC
Confidence 52 245899999999999998776653222268999999873
|
| >1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ... | Back alignment and structure |
|---|
Probab=98.01 E-value=5.7e-06 Score=90.89 Aligned_cols=109 Identities=16% Similarity=0.070 Sum_probs=72.6
Q ss_pred CCCcEEEEECCC---CCCCcc-HHHHHHHHHHH-hCCceEEEEeCC----CCCCCCCCCCCCCCCCchHHHHHHHHHHHH
Q 008093 158 DTTPIAIVIPGL---TSDSAA-SYIRHLVFNTA-KRGWNVVVSNHR----GLGGVSITSDCFYNAGWTEDAREVIGYLHH 228 (578)
Q Consensus 158 ~~~PiVVllHGl---~G~s~~-~yi~~l~~~l~-~~Gy~Vvv~D~R----G~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~ 228 (578)
...|+||++||- .|+... .| ....|+ +.|+.|+.+||| |++.++.. +......-..|..++++++++
T Consensus 107 ~~~Pv~v~iHGG~~~~g~~~~~~~---~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~-~~~~~n~gl~D~~~al~wv~~ 182 (537)
T 1ea5_A 107 KSTTVMVWIYGGGFYSGSSTLDVY---NGKYLAYTEEVVLVSLSYRVGAFGFLALHGS-QEAPGNVGLLDQRMALQWVHD 182 (537)
T ss_dssp SSEEEEEEECCSTTTCCCTTCGGG---CTHHHHHHHTCEEEECCCCCHHHHHCCCTTC-SSSCSCHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCcccCCCCCCCcc---ChHHHHhcCCEEEEEeccCccccccccCCCC-CCCcCccccHHHHHHHHHHHH
Confidence 457999999993 233322 13 233444 679999999999 44433211 111111235899999999987
Q ss_pred HC-----CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 229 EY-----PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 229 ~~-----~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
.. +..+|.++|+|.||.++...+........++++|+.++..
T Consensus 183 ni~~fggdp~~vtl~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~ 229 (537)
T 1ea5_A 183 NIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSP 229 (537)
T ss_dssp HGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCT
T ss_pred HHHHhCCCccceEEEecccHHHHHHHHHhCccchhhhhhheeccCCc
Confidence 62 2458999999999999987776532222699999999754
|
| >1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ... | Back alignment and structure |
|---|
Probab=97.97 E-value=1.2e-05 Score=88.18 Aligned_cols=110 Identities=17% Similarity=0.104 Sum_probs=73.3
Q ss_pred CCCcEEEEECCCC---CCCcc-HHHHHHHHHHHh-CCceEEEEeCC----CCCCCCCCCCCCCCCCchHHHHHHHHHHHH
Q 008093 158 DTTPIAIVIPGLT---SDSAA-SYIRHLVFNTAK-RGWNVVVSNHR----GLGGVSITSDCFYNAGWTEDAREVIGYLHH 228 (578)
Q Consensus 158 ~~~PiVVllHGl~---G~s~~-~yi~~l~~~l~~-~Gy~Vvv~D~R----G~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~ 228 (578)
...|+||++||-+ |+... .| ....+++ .|+.||.+||| |++.++...... ...-..|..++++++++
T Consensus 105 ~~~Pv~v~iHGGg~~~g~~~~~~~---~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~-~n~gl~D~~~al~wv~~ 180 (529)
T 1p0i_A 105 KNATVLIWIYGGGFQTGTSSLHVY---DGKFLARVERVIVVSMNYRVGALGFLALPGNPEAP-GNMGLFDQQLALQWVQK 180 (529)
T ss_dssp SSEEEEEEECCSTTTSCCTTCGGG---CTHHHHHHHCCEEEEECCCCHHHHHCCCTTCTTSC-SCHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCccccCCCCcccc---ChHHHhccCCeEEEEecccccccccccCCCCCCCc-CcccHHHHHHHHHHHHH
Confidence 4579999999932 32222 23 2344444 69999999999 444432111111 11225799999999987
Q ss_pred HC---C--CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcc
Q 008093 229 EY---P--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (578)
Q Consensus 229 ~~---~--~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d 271 (578)
.. + ..+|.++|+|.||.+++..+........++++|+.++...
T Consensus 181 ~i~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~ 228 (529)
T 1p0i_A 181 NIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSFN 228 (529)
T ss_dssp HGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCTT
T ss_pred HHHHhCCChhheEEeeccccHHHHHHHHhCccchHHHHHHHHhcCccc
Confidence 52 2 3579999999999999887766433236899999998643
|
| >1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=97.96 E-value=7.3e-06 Score=89.76 Aligned_cols=113 Identities=19% Similarity=0.197 Sum_probs=71.1
Q ss_pred CCCcEEEEECCCC--CCCccHHH-HHHHHHHHhCCceEEEEeCC----CCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC
Q 008093 158 DTTPIAIVIPGLT--SDSAASYI-RHLVFNTAKRGWNVVVSNHR----GLGGVSITSDCFYNAGWTEDAREVIGYLHHEY 230 (578)
Q Consensus 158 ~~~PiVVllHGl~--G~s~~~yi-~~l~~~l~~~Gy~Vvv~D~R----G~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~ 230 (578)
...|+||++||-+ .++...|- ..++ ...+.|+.|+.+||| |++.++..........-..|..++++|+++..
T Consensus 100 ~~~Pviv~iHGGg~~~g~~~~~~~~~~~-~~~~~g~vvv~~nYRlg~~Gf~~~~~~~~~~~~n~gl~D~~~al~wv~~ni 178 (522)
T 1ukc_A 100 SKLPVWLFIQGGGYAENSNANYNGTQVI-QASDDVIVFVTFNYRVGALGFLASEKVRQNGDLNAGLLDQRKALRWVKQYI 178 (522)
T ss_dssp CCEEEEEEECCSTTTSCCSCSCCCHHHH-HHTTSCCEEEEECCCCHHHHHCCCHHHHHSSCTTHHHHHHHHHHHHHHHHG
T ss_pred CCCCEEEEECCCccccCCccccCcHHHH-HhcCCcEEEEEecccccccccccchhccccCCCChhHHHHHHHHHHHHHHH
Confidence 4569999999942 11222221 1111 113569999999999 44443211000001123589999999998753
Q ss_pred -----CCCcEEEEEEchHHHHHHHHHhhcCC--CCCccEEEEEcCCcc
Q 008093 231 -----PKAPLFAIGTSIGANILVKYLGEEGE--KTPVAGAAAICSPWD 271 (578)
Q Consensus 231 -----~~~~i~lvGhSmGG~ial~ya~~~p~--~~~V~~~Vlis~p~d 271 (578)
+..+|.++|+|.||..+...+..... ...+.++|+.++.+.
T Consensus 179 ~~fggDp~~v~i~G~SaGg~~v~~~l~~~~~~~~~lf~~~i~~sg~~~ 226 (522)
T 1ukc_A 179 EQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFWP 226 (522)
T ss_dssp GGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCCC
T ss_pred HHcCCCchhEEEEEEChHHHHHHHHHhCCCccccccchhhhhcCCCcC
Confidence 23579999999999887766655421 237899999988654
|
| >3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=97.83 E-value=8.3e-05 Score=76.47 Aligned_cols=137 Identities=9% Similarity=0.084 Sum_probs=79.9
Q ss_pred CeeEEEEEec-CCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHh------CCce
Q 008093 119 SYRRQLFRLS-DGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAK------RGWN 191 (578)
Q Consensus 119 ~y~r~~l~~~-DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~------~Gy~ 191 (578)
..++..+..+ -|....+..+.|++-. +.+..-|+|+++||.. ...-...+...+.. .++-
T Consensus 11 ~v~~~~~~S~~l~~~r~~~VylP~~y~----------~~~~~yPVlylldG~~---~f~~~~~~~~~l~~~~~~~~~~~I 77 (331)
T 3gff_A 11 EYQSKRLESRLLKETREYVIALPEGYA----------QSLEAYPVVYLLDGED---QFDHMASLLQFLSQGTMPQIPKVI 77 (331)
T ss_dssp CEEEEEEEETTTTEEEEEEEECCTTGG----------GSCCCEEEEEESSHHH---HHHHHHHHHHHHTCSSSCSSCCCE
T ss_pred eEEEEEEEecCCCCeEEEEEEeCCCCC----------CCCCCccEEEEecChh---hhHHHHHHHHHHHhhhhcCCCCEE
Confidence 3455666665 4677777777765410 1134569999999941 11112334455543 2467
Q ss_pred EEEEeCCC--CCCCCCCCCCC---------CC-CC----chHHH-HHHHHHHHHHCCC-CcEEEEEEchHHHHHHHHHhh
Q 008093 192 VVVSNHRG--LGGVSITSDCF---------YN-AG----WTEDA-REVIGYLHHEYPK-APLFAIGTSIGANILVKYLGE 253 (578)
Q Consensus 192 Vvv~D~RG--~G~S~~~~~~~---------~~-~~----~~~Dl-~~~i~~l~~~~~~-~~i~lvGhSmGG~ial~ya~~ 253 (578)
||.++..+ ...++...... +. .+ +.+.+ .+++.++.++++. ....++||||||..++.++..
T Consensus 78 vV~i~~~~R~~dytp~~~~~~~~G~~~~~~~~~~g~~~~~~~~l~~el~p~i~~~~~~~~~r~i~G~S~GG~~al~~~~~ 157 (331)
T 3gff_A 78 IVGIHNTNRMRDYTPTHTLVLPSGNKGNPQYQHTGGAGRFLDFIEKELAPSIESQLRTNGINVLVGHSFGGLVAMEALRT 157 (331)
T ss_dssp EEEECCSSHHHHSCSSCCSBCTTSSBCCGGGGGCCCHHHHHHHHHHTHHHHHHHHSCEEEEEEEEEETHHHHHHHHHHHT
T ss_pred EEEECCCCcccccCCCccccccccccccccCCCCCcHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEECHHHHHHHHHHHh
Confidence 77777521 00111100000 00 11 11222 3567778888752 234789999999999999999
Q ss_pred cCCCCCccEEEEEcCCc
Q 008093 254 EGEKTPVAGAAAICSPW 270 (578)
Q Consensus 254 ~p~~~~V~~~Vlis~p~ 270 (578)
+|+ .+.+++++|+.+
T Consensus 158 ~p~--~F~~~~~~S~~~ 172 (331)
T 3gff_A 158 DRP--LFSAYLALDTSL 172 (331)
T ss_dssp TCS--SCSEEEEESCCT
T ss_pred Cch--hhheeeEeCchh
Confidence 998 899999998864
|
| >2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A* | Back alignment and structure |
|---|
Probab=97.76 E-value=2.7e-05 Score=79.63 Aligned_cols=35 Identities=9% Similarity=0.074 Sum_probs=30.2
Q ss_pred CCcEEEEEEchHHHHHHHHHhhcCCCCCcc-EEEEEcC
Q 008093 232 KAPLFAIGTSIGANILVKYLGEEGEKTPVA-GAAAICS 268 (578)
Q Consensus 232 ~~~i~lvGhSmGG~ial~ya~~~p~~~~V~-~~Vlis~ 268 (578)
..+|++.|+|+||.+++.++..+++ .++ ++++++.
T Consensus 10 ~~RI~v~G~S~GG~mA~~~a~~~p~--~fa~g~~v~ag 45 (318)
T 2d81_A 10 PNSVSVSGLASGGYMAAQLGVAYSD--VFNVGFGVFAG 45 (318)
T ss_dssp EEEEEEEEETHHHHHHHHHHHHTTT--TSCSEEEEESC
T ss_pred cceEEEEEECHHHHHHHHHHHHCch--hhhccceEEec
Confidence 3589999999999999999999998 787 7777764
|
| >1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A* | Back alignment and structure |
|---|
Probab=97.75 E-value=4.1e-05 Score=84.93 Aligned_cols=110 Identities=17% Similarity=0.031 Sum_probs=71.1
Q ss_pred CCCcEEEEECCC---CCCCcc-HHHHHHHHHHH-hCCceEEEEeCC----CCCCCCCC-----CCCCCCCCchHHHHHHH
Q 008093 158 DTTPIAIVIPGL---TSDSAA-SYIRHLVFNTA-KRGWNVVVSNHR----GLGGVSIT-----SDCFYNAGWTEDAREVI 223 (578)
Q Consensus 158 ~~~PiVVllHGl---~G~s~~-~yi~~l~~~l~-~~Gy~Vvv~D~R----G~G~S~~~-----~~~~~~~~~~~Dl~~~i 223 (578)
...|+||++||- .|+... .| ....++ +.|+.|+.+||| |+...... ........-..|..+++
T Consensus 139 ~~~PV~v~iHGGg~~~g~~~~~~~---~~~~l~~~~~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~~~n~gl~D~~~al 215 (585)
T 1dx4_A 139 NGLPILIWIYGGGFMTGSATLDIY---NADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAI 215 (585)
T ss_dssp SSEEEEEEECCSTTTCCCTTCGGG---CCHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHH
T ss_pred CCCCEEEEECCCcccCCCCCCCCC---CchhhhccCCEEEEEecccccchhhcccccccccccCCCCCCcccHHHHHHHH
Confidence 457999999993 233322 23 123344 368999999999 44332110 01111111247999999
Q ss_pred HHHHHHC---C--CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 224 GYLHHEY---P--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 224 ~~l~~~~---~--~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
+|+++.. + ..+|.++|+|.||.++..++........++++|+.++..
T Consensus 216 ~wv~~ni~~fggDp~~vti~G~SaGg~~v~~~~~~~~~~~lf~~ai~~Sg~~ 267 (585)
T 1dx4_A 216 RWLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTM 267 (585)
T ss_dssp HHHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCT
T ss_pred HHHHHHHHHhCCCcceeEEeecchHHHHHHHHHhCCcccchhHhhhhhcccc
Confidence 9998752 2 357999999999999887776543333689999998753
|
| >1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A* | Back alignment and structure |
|---|
Probab=97.70 E-value=5.7e-05 Score=75.39 Aligned_cols=99 Identities=12% Similarity=0.088 Sum_probs=65.4
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEE-EeCCCCCCCCCCCCCCCC--CCchHHHHHHHHHHHHHCCCCcE
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVV-SNHRGLGGVSITSDCFYN--AGWTEDAREVIGYLHHEYPKAPL 235 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv-~D~RG~G~S~~~~~~~~~--~~~~~Dl~~~i~~l~~~~~~~~i 235 (578)
.+-+||.+||.. + +...+.+.++.++. .|++|.+.. . ..++. ....+|+.+.++.+.+++|..++
T Consensus 73 ~~~iVva~RGT~--~-------~~d~l~d~~~~~~~~~~~~~~~~v--h-~Gf~~~~~~~~~~~~~~~~~~~~~~~~~~i 140 (269)
T 1tib_A 73 NKLIVLSFRGSR--S-------IENWIGNLNFDLKEINDICSGCRG--H-DGFTSSWRSVADTLRQKVEDAVREHPDYRV 140 (269)
T ss_dssp TTEEEEEECCCS--C-------THHHHTCCCCCEEECTTTSTTCEE--E-HHHHHHHHHHHHHHHHHHHHHHHHCTTSEE
T ss_pred CCEEEEEEeCCC--C-------HHHHHHhcCeeeeecCCCCCCCEe--c-HHHHHHHHHHHHHHHHHHHHHHHHCCCceE
Confidence 456899999973 2 23455777887776 455542110 0 01110 01236888888999889999999
Q ss_pred EEEEEchHHHHHHHHHhhcCCC-CCccEEEEEcCCc
Q 008093 236 FAIGTSIGANILVKYLGEEGEK-TPVAGAAAICSPW 270 (578)
Q Consensus 236 ~lvGhSmGG~ial~ya~~~p~~-~~V~~~Vlis~p~ 270 (578)
+++||||||.+|..++.+.... .++. ++..++|.
T Consensus 141 ~l~GHSLGGalA~l~a~~l~~~~~~~~-~~tfg~P~ 175 (269)
T 1tib_A 141 VFTGHSLGGALATVAGADLRGNGYDID-VFSYGAPR 175 (269)
T ss_dssp EEEEETHHHHHHHHHHHHHTTSSSCEE-EEEESCCC
T ss_pred EEecCChHHHHHHHHHHHHHhcCCCeE-EEEeCCCC
Confidence 9999999999999998876542 1354 55566554
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=97.56 E-value=0.0011 Score=70.94 Aligned_cols=139 Identities=16% Similarity=0.152 Sum_probs=83.7
Q ss_pred CeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHH-----------HHH-
Q 008093 119 SYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVF-----------NTA- 186 (578)
Q Consensus 119 ~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~-----------~l~- 186 (578)
+-.--.++..++..+-+ |+..... ...++|+||++||-.|+|.. + -.+.+ .+.
T Consensus 20 ~~~sGyv~v~~~~~lfy-~f~~s~~------------~~~~~Pl~lwlnGGPG~Ss~-~-g~~~e~GP~~~~~~~~~l~~ 84 (452)
T 1ivy_A 20 RQYSGYLKSSGSKHLHY-WFVESQK------------DPENSPVVLWLNGGPGCSSL-D-GLLTEHGPFLVQPDGVTLEY 84 (452)
T ss_dssp CEEEEEEECSTTEEEEE-EEECCSS------------CGGGSCEEEEECCTTTBCTH-H-HHHTTTSSEEECTTSSCEEE
T ss_pred eeeEEEEeeCCCCeEEE-EEEEcCC------------CCCCCCEEEEECCCCcHHHH-H-HHHHhcCCcEEeCCCceeee
Confidence 33445777777666665 5544321 12468999999999987764 2 11211 000
Q ss_pred -----hCCceEEEEeC-CCCCCCCCCCCCCCCCC---chHHHHH-HHHHHHH--HCCCCcEEEEEEchHHHHHHHHHhhc
Q 008093 187 -----KRGWNVVVSNH-RGLGGVSITSDCFYNAG---WTEDARE-VIGYLHH--EYPKAPLFAIGTSIGANILVKYLGEE 254 (578)
Q Consensus 187 -----~~Gy~Vvv~D~-RG~G~S~~~~~~~~~~~---~~~Dl~~-~i~~l~~--~~~~~~i~lvGhSmGG~ial~ya~~~ 254 (578)
.+-.+++-+|. +|.|.|-.... .+... ..+|+.+ +.+++.. ++...+++++|+|+||..+..+|.+.
T Consensus 85 n~~sw~~~~~~lfiDqP~GtGfS~~~~~-~~~~~~~~~a~~~~~~l~~f~~~~p~~~~~~~~i~GeSYgG~y~p~la~~i 163 (452)
T 1ivy_A 85 NPYSWNLIANVLYLESPAGVGFSYSDDK-FYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLV 163 (452)
T ss_dssp CTTCGGGSSEEEEECCSTTSTTCEESSC-CCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHH
T ss_pred CCCcccccccEEEEecCCCCCcCCcCCC-CCcCCcHHHHHHHHHHHHHHHHhcHHhcCCCEEEEeeccceeehHHHHHHH
Confidence 13468999995 89999863322 22222 1234433 4444443 34467999999999999665555432
Q ss_pred C--CCCCccEEEEEcCCcchh
Q 008093 255 G--EKTPVAGAAAICSPWDLL 273 (578)
Q Consensus 255 p--~~~~V~~~Vlis~p~d~~ 273 (578)
- ....++|+++.++-.|..
T Consensus 164 ~~~~~~~l~g~~ign~~~d~~ 184 (452)
T 1ivy_A 164 MQDPSMNLQGLAVGNGLSSYE 184 (452)
T ss_dssp TTCTTSCEEEEEEESCCSBHH
T ss_pred HhcCccccceEEecCCccChh
Confidence 1 123799999888766643
|
| >1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A* | Back alignment and structure |
|---|
Probab=97.52 E-value=0.0015 Score=64.30 Aligned_cols=115 Identities=13% Similarity=0.128 Sum_probs=74.0
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHH-----------HHH------hCCceEEEEeC-CCCCCCCCCCCCCC-CCCch--
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVF-----------NTA------KRGWNVVVSNH-RGLGGVSITSDCFY-NAGWT-- 216 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~-----------~l~------~~Gy~Vvv~D~-RG~G~S~~~~~~~~-~~~~~-- 216 (578)
.++|+|++++|-.|+|...| -.+.+ .+. .+-.+++-+|. .|.|.|-......+ ..+..
T Consensus 46 ~~~Pl~lwlnGGPGcSS~~~-g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGtGfSy~~~~~~~~~~~~~~~ 124 (255)
T 1whs_A 46 QPAPLVLWLNGGPGCSSVAY-GASEELGAFRVKPRGAGLVLNEYRWNKVANVLFLDSPAGVGFSYTNTSSDIYTSGDNRT 124 (255)
T ss_dssp CSCCEEEEECCTTTBCTTTT-HHHHTSSSEEECGGGCCEEECTTCGGGTSEEEEECCSTTSTTCEESSGGGGGSCCHHHH
T ss_pred CCCCEEEEECCCCchHHHHH-HHHhccCCeEecCCCCeeeeCcccccccCCEEEEecCCCCccCCCcCccccccCCHHHH
Confidence 56899999999999887643 11110 000 12368999995 69998854433233 22223
Q ss_pred -HHHHHHHHHHHHHCC---CCcEEEEEEchHHHHHHHHHhhc----CCCCCccEEEEEcCCcchh
Q 008093 217 -EDAREVIGYLHHEYP---KAPLFAIGTSIGANILVKYLGEE----GEKTPVAGAAAICSPWDLL 273 (578)
Q Consensus 217 -~Dl~~~i~~l~~~~~---~~~i~lvGhSmGG~ial~ya~~~----p~~~~V~~~Vlis~p~d~~ 273 (578)
+|+.++++...+++| ..++++.|.|+||..+..+|.+- .....++|+++.++-.|..
T Consensus 125 a~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~inLkGi~ign~~~d~~ 189 (255)
T 1whs_A 125 AHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPVINLKGFMVGNGLIDDY 189 (255)
T ss_dssp HHHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHHHHHTCSSCEEEEEEEEEECCBHH
T ss_pred HHHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHHHHHcCCcccccceEEecCCccCHH
Confidence 455555555555554 56899999999999877666432 1224688998887766653
|
| >4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A* | Back alignment and structure |
|---|
Probab=97.50 E-value=0.0024 Score=68.83 Aligned_cols=110 Identities=23% Similarity=0.186 Sum_probs=78.4
Q ss_pred CCCcEEEEECCCCCCCccHHHHH---HHHHHHhCCceEEEEeCCCCCCCCCCCCCCC--------C-CCchHHHHHHHHH
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRH---LVFNTAKRGWNVVVSNHRGLGGVSITSDCFY--------N-AGWTEDAREVIGY 225 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~---l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~--------~-~~~~~Dl~~~i~~ 225 (578)
...|++|++-|= |. ...+... +...+.+.|=-++++.||=+|.|........ + .....|++.++.+
T Consensus 41 ~~gPIfl~~gGE-g~-~~~~~~~~g~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~st~~~nL~yLt~eQALaD~a~fi~~ 118 (472)
T 4ebb_A 41 GEGPIFFYTGNE-GD-VWAFANNSAFVAELAAERGALLVFAEHRYYGKSLPFGAQSTQRGHTELLTVEQALADFAELLRA 118 (472)
T ss_dssp TTCCEEEEECCS-SC-HHHHHHHCHHHHHHHHHHTCEEEEECCTTSTTCCTTGGGGGSTTSCTTCSHHHHHHHHHHHHHH
T ss_pred CCCcEEEEECCC-cc-ccccccCccHHHHHHHHhCCeEEEEecccccCCcCCCCCCccccccccCCHHHHHHHHHHHHHH
Confidence 347877777653 32 2222211 2233444577899999999999965322111 1 1223799999999
Q ss_pred HHHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcc
Q 008093 226 LHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (578)
Q Consensus 226 l~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d 271 (578)
++..+ ++.|.+++|-|.||+++.-+-.++|+ .+.|+++-++|..
T Consensus 119 ~k~~~~~~~~pwI~~GGSY~G~LaAW~R~kYP~--lv~ga~ASSApv~ 164 (472)
T 4ebb_A 119 LRRDLGAQDAPAIAFGGSYGGMLSAYLRMKYPH--LVAGALAASAPVL 164 (472)
T ss_dssp HHHHTTCTTCCEEEEEETHHHHHHHHHHHHCTT--TCSEEEEETCCTT
T ss_pred HHhhcCCCCCCEEEEccCccchhhHHHHhhCCC--eEEEEEecccceE
Confidence 99887 35799999999999999998899999 8999999988764
|
| >1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=97.47 E-value=7e-05 Score=82.32 Aligned_cols=112 Identities=19% Similarity=0.103 Sum_probs=68.8
Q ss_pred CCCcEEEEECCCC--CCCccHH-HHHHHHH-HH-hCCceEEEEeCCCC--CCCCCCC--CCCCCCCchHHHHHHHHHHHH
Q 008093 158 DTTPIAIVIPGLT--SDSAASY-IRHLVFN-TA-KRGWNVVVSNHRGL--GGVSITS--DCFYNAGWTEDAREVIGYLHH 228 (578)
Q Consensus 158 ~~~PiVVllHGl~--G~s~~~y-i~~l~~~-l~-~~Gy~Vvv~D~RG~--G~S~~~~--~~~~~~~~~~Dl~~~i~~l~~ 228 (578)
...|+||++||-+ .++...| ...++.. ++ ..|+.|+.+|||.- |.-.... .......-..|..++++++++
T Consensus 120 ~~~Pviv~iHGGg~~~g~~~~~~~~~l~~~~l~~~~~~vvv~~nYRl~~~gf~~~~~~~~~~~~n~gl~D~~~Al~wv~~ 199 (544)
T 1thg_A 120 AKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITAEGNTNAGLHDQRKGLEWVSD 199 (544)
T ss_dssp CCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEECCCccccCCccccCchHHHHHHhhcCCCEEEEeCCCCCCcccCCCcccccccCCCchhHHHHHHHHHHHHH
Confidence 4579999999942 1222222 0123322 22 35899999999962 2111000 000111235799999999987
Q ss_pred HC-----CCCcEEEEEEchHHHHHHHHHhhc-C-----CCCCccEEEEEcCC
Q 008093 229 EY-----PKAPLFAIGTSIGANILVKYLGEE-G-----EKTPVAGAAAICSP 269 (578)
Q Consensus 229 ~~-----~~~~i~lvGhSmGG~ial~ya~~~-p-----~~~~V~~~Vlis~p 269 (578)
.. +..+|.++|+|.||.+++..+... + ....++++|+.++.
T Consensus 200 ni~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~~Sg~ 251 (544)
T 1thg_A 200 NIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGG 251 (544)
T ss_dssp HGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCC
T ss_pred HHHHhCCChhHeEEEEECHHHHHHHHHHhCCCccccccccccccceEEeccc
Confidence 52 245899999999999988776652 1 12268999999863
|
| >1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A* | Back alignment and structure |
|---|
Probab=97.45 E-value=9.1e-05 Score=81.21 Aligned_cols=112 Identities=14% Similarity=0.057 Sum_probs=68.7
Q ss_pred CCCcEEEEECCCC--CCCccHHH-HHHHH-H-HHhCCceEEEEeCCCC--CCCCCCC--CCCCCCCchHHHHHHHHHHHH
Q 008093 158 DTTPIAIVIPGLT--SDSAASYI-RHLVF-N-TAKRGWNVVVSNHRGL--GGVSITS--DCFYNAGWTEDAREVIGYLHH 228 (578)
Q Consensus 158 ~~~PiVVllHGl~--G~s~~~yi-~~l~~-~-l~~~Gy~Vvv~D~RG~--G~S~~~~--~~~~~~~~~~Dl~~~i~~l~~ 228 (578)
...|+||++||-+ .++...|- ..++. . ..+.|+.|+.+|||.- |.-.... .......-..|..++++++++
T Consensus 112 ~~~Pv~v~iHGGg~~~g~~~~~~~~~l~~~~~~~~~~~vvv~~nYRl~~~gf~~~~~~~~~~~~n~gl~D~~~Al~wv~~ 191 (534)
T 1llf_A 112 ANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEGSGNAGLKDQRLGMQWVAD 191 (534)
T ss_dssp CCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEeCCCcccCCCcccCchHHHHHHHhcCCCEEEEEeCCCCCCCCCCCcccccccCCCchhHHHHHHHHHHHHH
Confidence 4569999999942 22222220 12222 2 2346899999999952 2111000 000111235799999999987
Q ss_pred H---C--CCCcEEEEEEchHHHHHHHHHhhc------CCCCCccEEEEEcCC
Q 008093 229 E---Y--PKAPLFAIGTSIGANILVKYLGEE------GEKTPVAGAAAICSP 269 (578)
Q Consensus 229 ~---~--~~~~i~lvGhSmGG~ial~ya~~~------p~~~~V~~~Vlis~p 269 (578)
. + +..+|.++|+|.||+.++..+... .....++++|+.++.
T Consensus 192 ni~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~~Sg~ 243 (534)
T 1llf_A 192 NIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGA 243 (534)
T ss_dssp HGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCC
T ss_pred HHHHhCCCcccEEEEEECHhHHHHHHHHcCCCccccccccchhHhHhhhccC
Confidence 5 2 245899999999998877666543 112268999999874
|
| >1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00033 Score=70.14 Aligned_cols=100 Identities=17% Similarity=0.112 Sum_probs=60.5
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCC--CCchHHHHHHHHHHHHHCCCCcEE
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN--AGWTEDAREVIGYLHHEYPKAPLF 236 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~--~~~~~Dl~~~i~~l~~~~~~~~i~ 236 (578)
.+.+||.+||.. +. ...+.+.++.....|....|.. ...++. ....+++.+.++.+.+++|..+++
T Consensus 73 ~~~iVvafRGT~--~~-------~d~~~d~~~~~~~~~~~~~~~v---h~Gf~~~~~~~~~~~~~~l~~~~~~~p~~~i~ 140 (279)
T 1tia_A 73 NSAVVLAFRGSY--SV-------RNWVADATFVHTNPGLCDGCLA---ELGFWSSWKLVRDDIIKELKEVVAQNPNYELV 140 (279)
T ss_pred CCEEEEEEeCcC--CH-------HHHHHhCCcEeecCCCCCCCcc---ChhHHHHHHHHHHHHHHHHHHHHHHCCCCeEE
Confidence 456899999983 22 2334455666655443211111 011111 012357777888888889989999
Q ss_pred EEEEchHHHHHHHHHhhcCCCC-CccEEEEEcCCc
Q 008093 237 AIGTSIGANILVKYLGEEGEKT-PVAGAAAICSPW 270 (578)
Q Consensus 237 lvGhSmGG~ial~ya~~~p~~~-~V~~~Vlis~p~ 270 (578)
++||||||.+|..++....... +...++..++|-
T Consensus 141 vtGHSLGGalA~l~a~~l~~~g~~~v~~~tfg~Pr 175 (279)
T 1tia_A 141 VVGHSLGAAVATLAATDLRGKGYPSAKLYAYASPR 175 (279)
T ss_pred EEecCHHHHHHHHHHHHHHhcCCCceeEEEeCCCC
Confidence 9999999999998887654321 212456666653
|
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00029 Score=85.41 Aligned_cols=92 Identities=14% Similarity=0.149 Sum_probs=60.9
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEE
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAI 238 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lv 238 (578)
..+.++++|+.+| ....| ..++..+. .+.+++++..+.. .. +...++.+....+..++.++
T Consensus 1057 ~~~~L~~l~~~~g-~~~~y-~~la~~L~--~~~v~~l~~~~~~------------~~---~~~~~~~i~~~~~~gp~~l~ 1117 (1304)
T 2vsq_A 1057 QEQIIFAFPPVLG-YGLMY-QNLSSRLP--SYKLCAFDFIEEE------------DR---LDRYADLIQKLQPEGPLTLF 1117 (1304)
T ss_dssp SCCEEECCCCTTC-BGGGG-HHHHTTCC--SCEEEECBCCCST------------TH---HHHHHHHHHHHCCSSCEEEE
T ss_pred cCCcceeeccccc-chHHH-HHHHhccc--ccceEeecccCHH------------HH---HHHHHHHHHHhCCCCCeEEE
Confidence 3456889999865 44456 55665554 6888887763221 11 22344555555667799999
Q ss_pred EEchHHHHHHHHHhhcCC-CCCccEEEEEcCC
Q 008093 239 GTSIGANILVKYLGEEGE-KTPVAGAAAICSP 269 (578)
Q Consensus 239 GhSmGG~ial~ya~~~p~-~~~V~~~Vlis~p 269 (578)
||||||.++..++.+... ...+..++++++.
T Consensus 1118 G~S~Gg~lA~e~A~~L~~~g~~v~~l~lld~~ 1149 (1304)
T 2vsq_A 1118 GYSAGCSLAFEAAKKLEEQGRIVQRIIMVDSY 1149 (1304)
T ss_dssp EETTHHHHHHHHHHHHHHSSCCEEEEEEESCC
T ss_pred EecCCchHHHHHHHHHHhCCCceeEEEEecCc
Confidence 999999999988765322 1268888888764
|
| >3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A* | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00041 Score=76.69 Aligned_cols=106 Identities=12% Similarity=0.052 Sum_probs=69.8
Q ss_pred CCCcEEEEECCCC--CCCccHHHHHHHHHHHh-CCceEEEEeCCC----CCCCCCCCCCCCCCCchHHHHHHHHHHHHH-
Q 008093 158 DTTPIAIVIPGLT--SDSAASYIRHLVFNTAK-RGWNVVVSNHRG----LGGVSITSDCFYNAGWTEDAREVIGYLHHE- 229 (578)
Q Consensus 158 ~~~PiVVllHGl~--G~s~~~yi~~l~~~l~~-~Gy~Vvv~D~RG----~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~- 229 (578)
...|+||++||-+ .++...| .. ..+++ .|+.||.+|||- +..++.. ......-..|..++++++++.
T Consensus 129 ~~~Pv~v~iHGGg~~~g~~~~~-~~--~~la~~~~~vvv~~~YRl~~~Gfl~~~~~--~~~~n~gl~D~~~al~wv~~ni 203 (574)
T 3bix_A 129 GPKPVMVYIHGGSYMEGTGNLY-DG--SVLASYGNVIVITVNYRLGVLGFLSTGDQ--AAKGNYGLLDLIQALRWTSENI 203 (574)
T ss_dssp CCEEEEEECCCSSSSSCCGGGS-CC--HHHHHHHTCEEEEECCCCHHHHHCCCSSS--SCCCCHHHHHHHHHHHHHHHHG
T ss_pred CCCcEEEEECCCcccCCCCCcc-Cc--hhhhccCCEEEEEeCCcCcccccCcCCCC--CCCCcccHHHHHHHHHHHHHHH
Confidence 3469999999932 2233333 11 23444 479999999993 3322211 111112358999999999875
Q ss_pred --C--CCCcEEEEEEchHHHHHHHHHhhcCCC-CCccEEEEEcC
Q 008093 230 --Y--PKAPLFAIGTSIGANILVKYLGEEGEK-TPVAGAAAICS 268 (578)
Q Consensus 230 --~--~~~~i~lvGhSmGG~ial~ya~~~p~~-~~V~~~Vlis~ 268 (578)
+ +..+|.++|+|.||+++..++...... ..+.++|+.++
T Consensus 204 ~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~glf~~aI~~Sg 247 (574)
T 3bix_A 204 GFFGGDPLRITVFGSGAGGSCVNLLTLSHYSEKGLFQRAIAQSG 247 (574)
T ss_dssp GGGTEEEEEEEEEEETHHHHHHHHHHTCTTSCTTSCCEEEEESC
T ss_pred HHhCCCchhEEEEeecccHHHHHHHhhCCCcchhHHHHHHHhcC
Confidence 2 235799999999999998887665443 46889998875
|
| >2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00047 Score=76.22 Aligned_cols=110 Identities=16% Similarity=0.079 Sum_probs=67.7
Q ss_pred CCCcEEEEECCCC---CCCcc-HHH---HHHHHHHH-hCCceEEEEeCC----CCCCCCCCCCCCCCCCchHHHHHHHHH
Q 008093 158 DTTPIAIVIPGLT---SDSAA-SYI---RHLVFNTA-KRGWNVVVSNHR----GLGGVSITSDCFYNAGWTEDAREVIGY 225 (578)
Q Consensus 158 ~~~PiVVllHGl~---G~s~~-~yi---~~l~~~l~-~~Gy~Vvv~D~R----G~G~S~~~~~~~~~~~~~~Dl~~~i~~ 225 (578)
...|+||++||-+ |+... .+. ......++ +.|+.|+.+||| |++.+.. .......-..|..++++|
T Consensus 96 ~~~PV~v~iHGGg~~~Gs~~~~~~~~~~~~~~~~la~~~~vvvV~~nYRLg~~Gfl~~~~--~~~pgn~gl~D~~~Al~w 173 (579)
T 2bce_A 96 HDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGD--SNLPGNYGLWDQHMAIAW 173 (579)
T ss_dssp CSEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHCCCSS--TTCCCCHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCcccCCCCCccccccccccChHHHhcCCCEEEEEeCCccccccCCcCCC--CCCCCccchHHHHHHHHH
Confidence 4569999999942 22211 000 00123333 457999999999 3433211 111111125799999999
Q ss_pred HHHH---CC--CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCC
Q 008093 226 LHHE---YP--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSP 269 (578)
Q Consensus 226 l~~~---~~--~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p 269 (578)
+++. ++ ..+|.++|+|.||.++...+........++++|+.++.
T Consensus 174 v~~ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~~~lf~~ai~~Sg~ 222 (579)
T 2bce_A 174 VKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGV 222 (579)
T ss_dssp HHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCC
T ss_pred HHHHHHHhCCCcccEEEecccccchheeccccCcchhhHHHHHHHhcCC
Confidence 9875 22 35799999999999998776543222368999998863
|
| >1tgl_A Triacyl-glycerol acylhydrolase; carboxylic esterase; 1.90A {Rhizomucor miehei} SCOP: c.69.1.17 PDB: 4tgl_A 5tgl_A* 3tgl_A | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0048 Score=61.27 Aligned_cols=79 Identities=11% Similarity=0.139 Sum_probs=47.7
Q ss_pred CceEEEEeCCCCCCCCCCCCCCCC--CCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhc----C--CCCCc
Q 008093 189 GWNVVVSNHRGLGGVSITSDCFYN--AGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEE----G--EKTPV 260 (578)
Q Consensus 189 Gy~Vvv~D~RG~G~S~~~~~~~~~--~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~----p--~~~~V 260 (578)
...+...+++|+.+.... ..++. ....+++.+.++.+.+++|..+++++||||||.+|..++.+. . ...++
T Consensus 91 d~~~~~~~~p~~~~~~vh-~gf~~~~~~l~~~~~~~l~~~~~~~p~~~i~~~GHSLGgalA~l~a~~l~~~~~~~~~~~v 169 (269)
T 1tgl_A 91 DLTFVPVSYPPVSGTKVH-KGFLDSYGEVQNELVATVLDQFKQYPSYKVAVTGHSLGGATALLCALDLYQREEGLSSSNL 169 (269)
T ss_pred hCceEeeeCCCCCCCEEc-HHHHHHHHHHHHHHHHHHHHHHHHCCCceEEEEeeCHHHHHHHHHHHHHhhhhhccCCCCe
Confidence 456677778774221111 11111 012245666666667778888899999999999999887665 3 12245
Q ss_pred cEEEEEcCC
Q 008093 261 AGAAAICSP 269 (578)
Q Consensus 261 ~~~Vlis~p 269 (578)
. ++..++|
T Consensus 170 ~-~~tfg~P 177 (269)
T 1tgl_A 170 F-LYTQGQP 177 (269)
T ss_pred E-EEEeCCC
Confidence 4 5555555
|
| >1lgy_A Lipase, triacylglycerol lipase; hydrolase (carboxylic ester); 2.20A {Rhizopus niveus} SCOP: c.69.1.17 PDB: 1tic_A | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0057 Score=60.75 Aligned_cols=53 Identities=13% Similarity=0.083 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhc----CC--CCCccEEEEEcCCc
Q 008093 217 EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEE----GE--KTPVAGAAAICSPW 270 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~----p~--~~~V~~~Vlis~p~ 270 (578)
+++.+.++.+.+++|..++++.||||||.+|..++... .. ..++ .++..++|-
T Consensus 121 ~~~~~~l~~~~~~~~~~~i~vtGHSLGGalA~l~a~~~~~~~~~~~~~~v-~~~tFg~Pr 179 (269)
T 1lgy_A 121 NDYFPVVQEQLTAHPTYKVIVTGHSLGGAQALLAGMDLYQREPRLSPKNL-SIFTVGGPR 179 (269)
T ss_dssp HHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHHHHHCTTCSTTTE-EEEEESCCC
T ss_pred HHHHHHHHHHHHHCCCCeEEEeccChHHHHHHHHHHHHHhhccccCCCCe-EEEEecCCC
Confidence 57777888888889989999999999999999887665 31 1134 566677664
|
| >1gxs_A P-(S)-hydroxymandelonitrIle lyase chain A; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=96.29 E-value=0.053 Score=53.60 Aligned_cols=113 Identities=12% Similarity=0.093 Sum_probs=69.0
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHH---H--------HH------hCCceEEEEe-CCCCCCCCCCCCCCCCCCc---h
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVF---N--------TA------KRGWNVVVSN-HRGLGGVSITSDCFYNAGW---T 216 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~---~--------l~------~~Gy~Vvv~D-~RG~G~S~~~~~~~~~~~~---~ 216 (578)
..+|+|++++|-.|+|...| -.+.+ . +. .+-.+++-+| ..|.|.|-......+..+. .
T Consensus 52 ~~~Pl~lWlnGGPGcSS~~~-g~~~E~GP~~v~~~~~~l~~N~~SW~~~anllfiDqPvGtGfSy~~~~~~~~~~d~~~a 130 (270)
T 1gxs_A 52 AAAPLVLWLNGGPGCSSIGL-GAMQELGAFRVHTNGESLLLNEYAWNKAANILFAESPAGVGFSYSNTSSDLSMGDDKMA 130 (270)
T ss_dssp GGSCEEEEEECTTTBCTTTT-HHHHTTSSEEECTTSSCEEECTTCGGGTSEEEEECCSTTSTTCEESSGGGGCCCHHHHH
T ss_pred CCCCEEEEecCCCcccchhh-hhHHhccCceecCCCCcceeCccchhccccEEEEeccccccccCCCCCccccCCcHHHH
Confidence 56899999999999887643 11211 0 00 1125789999 4799988544333333333 3
Q ss_pred HHHHHHHHHHHHHCC---CCcEEEEEEchHHHHHHHHH--hhcC---CCCCccEEEEEcCCcch
Q 008093 217 EDAREVIGYLHHEYP---KAPLFAIGTSIGANILVKYL--GEEG---EKTPVAGAAAICSPWDL 272 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~---~~~i~lvGhSmGG~ial~ya--~~~p---~~~~V~~~Vlis~p~d~ 272 (578)
+|+.+++....+++| ..++++.|.| |-.+..... .+.. ....++|+++.++-.|.
T Consensus 131 ~d~~~fl~~f~~~fp~~~~~~~yi~GES-G~yvP~la~~i~~~n~~~~~inLkGi~ign~~~d~ 193 (270)
T 1gxs_A 131 QDTYTFLVKWFERFPHYNYREFYIAGES-GHFIPQLSQVVYRNRNNSPFINFQGLLVSSGLTND 193 (270)
T ss_dssp HHHHHHHHHHHHHCGGGTTSEEEEEEEC-TTHHHHHHHHHHHTTTTCTTCEEEEEEEESCCCBH
T ss_pred HHHHHHHHHHHHhChhhcCCCEEEEeCC-CcchHHHHHHHHhccccccceeeeeEEEeCCccCh
Confidence 566666666556554 5689999999 655543221 1221 12468898887776665
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=96.27 E-value=0.045 Score=58.92 Aligned_cols=112 Identities=12% Similarity=0.059 Sum_probs=66.7
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHH---H-------H------HhCCceEEEEeC-CCCCCCCCCCCCC-------CCC
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVF---N-------T------AKRGWNVVVSNH-RGLGGVSITSDCF-------YNA 213 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~---~-------l------~~~Gy~Vvv~D~-RG~G~S~~~~~~~-------~~~ 213 (578)
..+|++|+++|-.|+|.. + -.+.+ . + -.+-.+++-+|. +|.|.|-...... +..
T Consensus 65 ~~~Pl~lwlnGGPG~SS~-~-g~~~e~GP~~~~~~~~l~~n~~sw~~~~n~lfiDqPvGtGfSy~~~~~~~~~~~~~~~~ 142 (483)
T 1ac5_A 65 VDRPLIIWLNGGPGCSSM-D-GALVESGPFRVNSDGKLYLNEGSWISKGDLLFIDQPTGTGFSVEQNKDEGKIDKNKFDE 142 (483)
T ss_dssp SSCCEEEEECCTTTBCTH-H-HHHHSSSSEEECTTSCEEECTTCGGGTSEEEEECCSTTSTTCSSCCSSGGGSCTTSSCC
T ss_pred cCCCEEEEECCCCchHhh-h-hhHhhcCCeEecCCCceeecccchhhcCCeEEEecCCCccccCCcCcccccccccccCC
Confidence 568999999999987764 2 11110 0 0 012257999996 7999885433211 222
Q ss_pred Cc---hHHHHHHHHHHHHHCC---CCcEEEEEEchHHHHHHHHHhhc------C----CCCCccEEEEEcCCcc
Q 008093 214 GW---TEDAREVIGYLHHEYP---KAPLFAIGTSIGANILVKYLGEE------G----EKTPVAGAAAICSPWD 271 (578)
Q Consensus 214 ~~---~~Dl~~~i~~l~~~~~---~~~i~lvGhSmGG~ial~ya~~~------p----~~~~V~~~Vlis~p~d 271 (578)
+. .+|+.+++.....++| ..++++.|+|+||..+..+|..- . ....++|+++-++-.|
T Consensus 143 ~~~~~a~~~~~fl~~~~~~fP~~~~~~~~i~GeSYgg~y~p~~a~~i~~~n~~~~~~~~~inLkGi~IGNg~~d 216 (483)
T 1ac5_A 143 DLEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAILNHNKFSKIDGDTYDLKALLIGNGWID 216 (483)
T ss_dssp SHHHHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHHHHHHHHHCCSTTSCCEEEEEEEEEECCC
T ss_pred CHHHHHHHHHHHHHHHHHhChhhcCCCEEEEeccccccccHHHHHHHHHhcccccccCcccceeeeEecCCccc
Confidence 22 2355555554445555 46899999999998877665321 1 1236888865544333
|
| >1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A* | Back alignment and structure |
|---|
Probab=96.12 E-value=0.13 Score=54.15 Aligned_cols=132 Identities=12% Similarity=0.133 Sum_probs=80.3
Q ss_pred CCeeEEEEEecC-CcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhC--------
Q 008093 118 FSYRRQLFRLSD-GGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKR-------- 188 (578)
Q Consensus 118 ~~y~r~~l~~~D-G~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~-------- 188 (578)
++-.--.++..+ |..+-+ |+..... ...++|++++++|-.|+|.. + .+ +.+.
T Consensus 14 ~~~ysGYv~v~~~~~~lfy-~f~~s~~------------~~~~~Pl~lwlnGGPG~SS~-~--g~---~~e~GP~~~~~~ 74 (421)
T 1cpy_A 14 VTQYTGYLDVEDEDKHFFF-WTFESRN------------DPAKDPVILWLNGGPGCSSL-T--GL---FFALGPSSIGPD 74 (421)
T ss_dssp SCCCEEEEEETTTTEEEEE-EEECCSS------------CTTTSCEEEEECCTTTBCTH-H--HH---TTTTSSEEEETT
T ss_pred CceeEEEEEcCCCCcEEEE-EEEEeCC------------CCCCCCEEEEECCCCchHhH-H--HH---HHccCCcEECCC
Confidence 333445677764 555555 5554331 13568999999999887763 2 11 1111
Q ss_pred ------------CceEEEEe-CCCCCCCCCCCCCCCCC-CchHHHHHHHHHHHHHCC---C--CcEEEEEEchHHHHHHH
Q 008093 189 ------------GWNVVVSN-HRGLGGVSITSDCFYNA-GWTEDAREVIGYLHHEYP---K--APLFAIGTSIGANILVK 249 (578)
Q Consensus 189 ------------Gy~Vvv~D-~RG~G~S~~~~~~~~~~-~~~~Dl~~~i~~l~~~~~---~--~~i~lvGhSmGG~ial~ 249 (578)
-.+++-+| ..|.|.|-......... ....|+.++++...+++| . .++++.|.|+||..+-.
T Consensus 75 ~~l~~n~~sW~~~an~lfiDqPvGtGfSy~~~~~~~~~~~~a~~~~~fl~~~~~~~p~~~~~~~~~yi~GESY~G~y~p~ 154 (421)
T 1cpy_A 75 LKPIGNPYSWNSNATVIFLDQPVNVGFSYSGSSGVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGASYAGHYIPV 154 (421)
T ss_dssp TEEEECTTCGGGGSEEECCCCSTTSTTCEESSCCCCSSHHHHHHHHHHHHHHHHHCTTSTTTTCCEEEEEETTHHHHHHH
T ss_pred CceeECCcccccccCEEEecCCCcccccCCCCCCCCChHHHHHHHHHHHHHHHHhCHHhcccCCCEEEEeecccccccHH
Confidence 24677778 56888874432211111 223577777776666665 3 68999999999998776
Q ss_pred HHhhcCC----CCCccEEEEEcC
Q 008093 250 YLGEEGE----KTPVAGAAAICS 268 (578)
Q Consensus 250 ya~~~p~----~~~V~~~Vlis~ 268 (578)
+|..--+ ...++|+++-++
T Consensus 155 ~a~~i~~~n~~~inLkGi~IGNg 177 (421)
T 1cpy_A 155 FASEILSHKDRNFNLTSVLIGNG 177 (421)
T ss_dssp HHHHHTTCSSCSSCCCEEEEESC
T ss_pred HHHHHHhccccccceeeEEecCc
Confidence 6654322 246888755444
|
| >1uwc_A Feruloyl esterase A; hydrolase, serine esterase, xylan degradation; HET: NAG FER; 1.08A {Aspergillus niger} SCOP: c.69.1.17 PDB: 1uza_A* 2hl6_A* 2ix9_A* 1usw_A* 2bjh_A* | Back alignment and structure |
|---|
Probab=96.07 E-value=0.0095 Score=58.86 Aligned_cols=53 Identities=17% Similarity=0.255 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCC-CCCccEEEEEcCCc
Q 008093 217 EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGE-KTPVAGAAAICSPW 270 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~-~~~V~~~Vlis~p~ 270 (578)
+++.+.++.+.+++|+.++++.||||||.+|..++..... ..++. ++..++|-
T Consensus 109 ~~~~~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l~~~~~~v~-~~tFg~Pr 162 (261)
T 1uwc_A 109 DQVESLVKQQASQYPDYALTVTGHSLGASMAALTAAQLSATYDNVR-LYTFGEPR 162 (261)
T ss_dssp HHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHHTTCSSEE-EEEESCCC
T ss_pred HHHHHHHHHHHHHCCCceEEEEecCHHHHHHHHHHHHHhccCCCeE-EEEecCCC
Confidence 5677778888888999999999999999999877765432 12565 66666664
|
| >3hc7_A Gene 12 protein, GP12; alpha/beta sandwich, cell adhesion; 2.00A {Mycobacterium phage D29} | Back alignment and structure |
|---|
Probab=95.96 E-value=0.023 Score=55.72 Aligned_cols=106 Identities=11% Similarity=-0.036 Sum_probs=66.1
Q ss_pred CCcEEEEECCCCCC--CccHHHHHHHHHHHhCCceEEEE-eCCCCCCCCCCCCCCCCC---CchHHHHHHHHHHHHHCCC
Q 008093 159 TTPIAIVIPGLTSD--SAASYIRHLVFNTAKRGWNVVVS-NHRGLGGVSITSDCFYNA---GWTEDAREVIGYLHHEYPK 232 (578)
Q Consensus 159 ~~PiVVllHGl~G~--s~~~yi~~l~~~l~~~Gy~Vvv~-D~RG~G~S~~~~~~~~~~---~~~~Dl~~~i~~l~~~~~~ 232 (578)
++|+|++.||.+.. ....+...++..+.++ +.+=-+ ||+-... .|.. .-..++...++....+.|+
T Consensus 2 ~~p~ii~ARGT~e~~~~GpG~~~~la~~l~~~-~~~q~Vg~YpA~~~-------~y~~S~~~G~~~~~~~i~~~~~~CP~ 73 (254)
T 3hc7_A 2 SKPWLFTVHGTGQPDPLGPGLPADTARDVLDI-YRWQPIGNYPAAAF-------PMWPSVEKGVAELILQIELKLDADPY 73 (254)
T ss_dssp CCCEEEEECCTTCCCTTSSSHHHHHHTTSTTT-SEEEECCSCCCCSS-------SCHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred CCCEEEEECCCCCCCCCCCCcHHHHHHHHHHh-cCCCccccccCccc-------CccchHHHHHHHHHHHHHHHHhhCCC
Confidence 47999999998432 1112345666665432 322222 3432210 1111 1235677777777778899
Q ss_pred CcEEEEEEchHHHHHHHHHhhc---C------CCCCccEEEEEcCCcch
Q 008093 233 APLFAIGTSIGANILVKYLGEE---G------EKTPVAGAAAICSPWDL 272 (578)
Q Consensus 233 ~~i~lvGhSmGG~ial~ya~~~---p------~~~~V~~~Vlis~p~d~ 272 (578)
.++++.|+|.||.++-..+... + ...+|+++++++.|...
T Consensus 74 tkiVL~GYSQGA~V~~~~l~~~i~~~~g~~~~~~~~V~avvlfGdP~r~ 122 (254)
T 3hc7_A 74 ADFAMAGYSQGAIVVGQVLKHHILPPTGRLHRFLHRLKKVIFWGNPMRQ 122 (254)
T ss_dssp CCEEEEEETHHHHHHHHHHHHHTSSTTCTTGGGGGGEEEEEEESCTTCC
T ss_pred CeEEEEeeCchHHHHHHHHHhhccCCCCCchhhhhhEEEEEEEeCCCCC
Confidence 9999999999999998887662 0 01268999999887643
|
| >4az3_A Lysosomal protective protein 32 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_A* | Back alignment and structure |
|---|
Probab=95.92 E-value=0.35 Score=48.41 Aligned_cols=138 Identities=15% Similarity=0.161 Sum_probs=81.8
Q ss_pred CCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHH------------
Q 008093 118 FSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNT------------ 185 (578)
Q Consensus 118 ~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l------------ 185 (578)
++-..-.++..++..+-+ |+..... ....+|+||++-|-.|+|... .+...+
T Consensus 21 ~~~ysGyv~v~~~~~lFy-wf~es~~------------~p~~~Pl~lWlnGGPGcSS~~---g~~~E~GP~~~~~~~~~l 84 (300)
T 4az3_A 21 FRQYSGYLKGSGSKHLHY-WFVESQK------------DPENSPVVLWLNGGPGCSSLD---GLLTEHGPFLVQPDGVTL 84 (300)
T ss_dssp SCEEEEEEECSTTEEEEE-EEECCSS------------CTTTSCEEEEECCTTTBCTHH---HHHHTTSSEEECTTSSCE
T ss_pred cceeeeeeecCCCCeEEE-EEEEcCC------------CCCCCCEEEEECCCCcHHHHH---HHHhcCCCceecCCCccc
Confidence 333445677777766665 5444331 135689999999998877642 222111
Q ss_pred H------hCCceEEEEeCC-CCCCCCCCCCCCCCCCc---hHHHHHHHHHHHHHCC---CCcEEEEEEchHHHHHHHHHh
Q 008093 186 A------KRGWNVVVSNHR-GLGGVSITSDCFYNAGW---TEDAREVIGYLHHEYP---KAPLFAIGTSIGANILVKYLG 252 (578)
Q Consensus 186 ~------~~Gy~Vvv~D~R-G~G~S~~~~~~~~~~~~---~~Dl~~~i~~l~~~~~---~~~i~lvGhSmGG~ial~ya~ 252 (578)
. .+-.+++-+|.+ |.|-|-..... +..+. ..|+..++...-+++| ..++++.|-|.||..+-.+|.
T Consensus 85 ~~N~~sW~~~an~lfiD~PvGtGfSy~~~~~-~~~~~~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GESY~G~yvP~~a~ 163 (300)
T 4az3_A 85 EYNPYSWNLIANVLYLESPAGVGFSYSDDKF-YATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAV 163 (300)
T ss_dssp EECTTCGGGSSEEEEECCSTTSTTCEETTCC-CCCBHHHHHHHHHHHHHHHHHHCGGGTTSCEEEEEETTHHHHHHHHHH
T ss_pred cccCccHHhhhcchhhcCCCcccccccCCCc-ccccchhhHHHHHHHHHHHHHhChhhcCCceEEEecCCceeeHHHHHH
Confidence 0 012478888855 77877443221 22222 2455555554445554 678999999999988877765
Q ss_pred hcCC--CCCccEEEEEcCCcch
Q 008093 253 EEGE--KTPVAGAAAICSPWDL 272 (578)
Q Consensus 253 ~~p~--~~~V~~~Vlis~p~d~ 272 (578)
.--+ ...++|+++-++-.|.
T Consensus 164 ~i~~~~~inLkG~~iGNg~~d~ 185 (300)
T 4az3_A 164 LVMQDPSMNLQGLAVGNGLSSY 185 (300)
T ss_dssp HHTTCTTSCEEEEEEESCCSBH
T ss_pred HHHhCCCcccccceecCCccCH
Confidence 4332 2368887765554444
|
| >3ngm_A Extracellular lipase; secret lipase, hydrolase; 2.80A {Gibberella zeae} | Back alignment and structure |
|---|
Probab=95.57 E-value=0.013 Score=59.66 Aligned_cols=53 Identities=17% Similarity=0.208 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCC-CCCccEEEEEcCCc
Q 008093 217 EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGE-KTPVAGAAAICSPW 270 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~-~~~V~~~Vlis~p~ 270 (578)
+++...++.+.+++|..++++.||||||.+|...+..... ...+. ++..++|-
T Consensus 120 ~~l~~~l~~~~~~~p~~~i~vtGHSLGGAlA~L~a~~l~~~~~~v~-~~TFG~Pr 173 (319)
T 3ngm_A 120 AAATAAVAKARKANPSFKVVSVGHSLGGAVATLAGANLRIGGTPLD-IYTYGSPR 173 (319)
T ss_dssp HHHHHHHHHHHHSSTTCEEEEEEETHHHHHHHHHHHHHHHTTCCCC-EEEESCCC
T ss_pred HHHHHHHHHHHhhCCCCceEEeecCHHHHHHHHHHHHHHhcCCCce-eeecCCCC
Confidence 4667777777788898999999999999998876654321 11444 55566553
|
| >1g66_A Acetyl xylan esterase II; serine hydrolase, acetyl xylopyranose, hydrolase; 0.90A {Penicillium purpurogenum} SCOP: c.69.1.30 PDB: 1bs9_A 2axe_A* | Back alignment and structure |
|---|
Probab=95.47 E-value=0.05 Score=51.72 Aligned_cols=109 Identities=15% Similarity=0.101 Sum_probs=65.2
Q ss_pred EEEEECCCCCCCccHHHHHHHHHHHhC--CceEEEEeCCCCC-CCCCCCCCCCCC---CchHHHHHHHHHHHHHCCCCcE
Q 008093 162 IAIVIPGLTSDSAASYIRHLVFNTAKR--GWNVVVSNHRGLG-GVSITSDCFYNA---GWTEDAREVIGYLHHEYPKAPL 235 (578)
Q Consensus 162 iVVllHGl~G~s~~~yi~~l~~~l~~~--Gy~Vvv~D~RG~G-~S~~~~~~~~~~---~~~~Dl~~~i~~l~~~~~~~~i 235 (578)
.||+..|.+-......+..++..+.++ |-.+..++|+-.. .+... ...|.. .-..|+...++....+.|+.++
T Consensus 6 ~vi~aRGT~E~~g~G~~g~~~~~l~~~~~g~~~~~V~YpA~~~~~~~~-~~~y~~S~~~G~~~~~~~i~~~~~~CP~tki 84 (207)
T 1g66_A 6 HVFGARETTASPGYGSSSTVVNGVLSAYPGSTAEAINYPACGGQSSCG-GASYSSSVAQGIAAVASAVNSFNSQCPSTKI 84 (207)
T ss_dssp EEEEECCTTCCSSCGGGHHHHHHHHHHSTTCEEEECCCCCCSSCGGGT-SCCHHHHHHHHHHHHHHHHHHHHHHSTTCEE
T ss_pred EEEEEeCCCCCCCCCcccHHHHHHHHhCCCCceEEeeccccccccccC-CcchhhhHHHHHHHHHHHHHHHHHhCCCCcE
Confidence 466777764221111122444444432 4467788888642 21100 111211 1136788888888889999999
Q ss_pred EEEEEchHHHHHHHHHhhc--------------CC--CCCccEEEEEcCCcc
Q 008093 236 FAIGTSIGANILVKYLGEE--------------GE--KTPVAGAAAICSPWD 271 (578)
Q Consensus 236 ~lvGhSmGG~ial~ya~~~--------------p~--~~~V~~~Vlis~p~d 271 (578)
+++|||.||.++-..+... +. ..+|+++++++.|..
T Consensus 85 vl~GYSQGA~V~~~~~~~~~~~~~~i~~~~~~l~~~~~~~V~avvlfGdP~~ 136 (207)
T 1g66_A 85 VLVGYSQGGEIMDVALCGGGDPNQGYTNTAVQLSSSAVNMVKAAIFMGDPMF 136 (207)
T ss_dssp EEEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESCTTC
T ss_pred EEEeeCchHHHHHHHHhcccccccccccCCCCCChhhhccEEEEEEEcCCCc
Confidence 9999999999998877421 10 015888898887753
|
| >1qoz_A AXE, acetyl xylan esterase; hydrolase, xylan degradation; HET: NAG; 1.90A {Trichoderma reesei} SCOP: c.69.1.30 | Back alignment and structure |
|---|
Probab=95.33 E-value=0.056 Score=51.34 Aligned_cols=110 Identities=19% Similarity=0.147 Sum_probs=65.5
Q ss_pred EEEEECCCCCCCccHHHHHHHHHHHhC--CceEEEEeCCCCCCCCCCCCCCCCC---CchHHHHHHHHHHHHHCCCCcEE
Q 008093 162 IAIVIPGLTSDSAASYIRHLVFNTAKR--GWNVVVSNHRGLGGVSITSDCFYNA---GWTEDAREVIGYLHHEYPKAPLF 236 (578)
Q Consensus 162 iVVllHGl~G~s~~~yi~~l~~~l~~~--Gy~Vvv~D~RG~G~S~~~~~~~~~~---~~~~Dl~~~i~~l~~~~~~~~i~ 236 (578)
.||+..|.+-.........++..+.++ |-++..++|+-..+........|.. .=..|+...++....+.|+.+++
T Consensus 6 ~vi~aRGT~E~~g~G~~g~~~~~l~~~~~g~~~~~V~YpA~~~~~~~~~~~y~~S~~~G~~~~~~~i~~~~~~CP~tkiv 85 (207)
T 1qoz_A 6 HVFGARETTVSQGYGSSATVVNLVIQAHPGTTSEAIVYPACGGQASCGGISYANSVVNGTNAAAAAINNFHNSCPDTQLV 85 (207)
T ss_dssp EEEEECCTTCCSSCGGGHHHHHHHHHHSTTEEEEECCSCCCSSCGGGTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEE
T ss_pred EEEEEecCCCCCCCCcchHHHHHHHHhcCCCceEEeeccccccccccCCccccccHHHHHHHHHHHHHHHHhhCCCCcEE
Confidence 466777763322111123444544432 4467778888642211000111111 11367888888888899999999
Q ss_pred EEEEchHHHHHHHHHhh--------------cCC--CCCccEEEEEcCCcc
Q 008093 237 AIGTSIGANILVKYLGE--------------EGE--KTPVAGAAAICSPWD 271 (578)
Q Consensus 237 lvGhSmGG~ial~ya~~--------------~p~--~~~V~~~Vlis~p~d 271 (578)
++|||.||.++...+.. .+. ..+|+++++++.|..
T Consensus 86 l~GYSQGA~V~~~~~~~~~~~~~~i~~~~~~l~~~~~~~V~avvlfGdP~~ 136 (207)
T 1qoz_A 86 LVGYSQGAQIFDNALCGGGDPGEGITNTAVPLTAGAVSAVKAAIFMGDPRN 136 (207)
T ss_dssp EEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESCTTC
T ss_pred EEEeCchHHHHHHHHhccCcccccccCCCCCCChHHhccEEEEEEEcCCcc
Confidence 99999999999887742 110 015888899887753
|
| >3qpa_A Cutinase; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted; HET: MIR; 0.85A {Nectria haematococca} PDB: 3qpc_A* 1cex_A 1oxm_A* 1cui_A 1cus_A 2cut_A 1cuj_A 1cuy_A 1xzl_A* 1xzk_A* 1xzm_A* 1cuh_A 1cuu_A 3esc_A* 1cua_A* 3esa_A* 3esb_A* 3ef3_A* 3esd_A* 1cux_A ... | Back alignment and structure |
|---|
Probab=95.07 E-value=0.057 Score=50.77 Aligned_cols=56 Identities=16% Similarity=0.217 Sum_probs=46.6
Q ss_pred hHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCC--CCCccEEEEEcCCcc
Q 008093 216 TEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGE--KTPVAGAAAICSPWD 271 (578)
Q Consensus 216 ~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~--~~~V~~~Vlis~p~d 271 (578)
..|+...++....+.|+.+++++|+|.|+.++-..+...+. ..+|.++++++.|..
T Consensus 80 ~~~~~~~i~~~~~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGdP~~ 137 (197)
T 3qpa_A 80 IREMLGLFQQANTKCPDATLIAGGYXQGAALAAASIEDLDSAIRDKIAGTVLFGYTKN 137 (197)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHSCHHHHTTEEEEEEESCTTT
T ss_pred HHHHHHHHHHHHHhCCCCcEEEEecccccHHHHHHHhcCCHhHHhheEEEEEeeCCcc
Confidence 47888888888899999999999999999999888776542 127999999987753
|
| >3o0d_A YALI0A20350P, triacylglycerol lipase; alpha/beta-hydrolase, lipids binding, glycosylation, extracellular, hydrolase; HET: NAG; 1.70A {Yarrowia lipolytica} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=95.00 E-value=0.031 Score=56.32 Aligned_cols=53 Identities=11% Similarity=0.137 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCC-CccEEEEEcCCc
Q 008093 217 EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKT-PVAGAAAICSPW 270 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~-~V~~~Vlis~p~ 270 (578)
+++...++.+.+++|..++++.||||||.+|...+....... .+ .++..++|-
T Consensus 138 ~~i~~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l~~~~~~~-~~~tfg~Pr 191 (301)
T 3o0d_A 138 NQIGPKLDSVIEQYPDYQIAVTGHSLGGAAALLFGINLKVNGHDP-LVVTLGQPI 191 (301)
T ss_dssp HHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHHHTTCCC-EEEEESCCC
T ss_pred HHHHHHHHHHHHHCCCceEEEeccChHHHHHHHHHHHHHhcCCCc-eEEeeCCCC
Confidence 355566677777889899999999999999987765432211 23 456666653
|
| >3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium expansum} | Back alignment and structure |
|---|
Probab=94.97 E-value=0.027 Score=55.48 Aligned_cols=51 Identities=18% Similarity=0.177 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhc----CCCCCccEEEEEcCC
Q 008093 217 EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEE----GEKTPVAGAAAICSP 269 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~----p~~~~V~~~Vlis~p 269 (578)
+++.+.++.+.+++|+.++++.||||||.+|...+... +. .++ .++..++|
T Consensus 108 ~~~~~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l~~~~~~-~~v-~~~tFg~P 162 (258)
T 3g7n_A 108 DTIITEVKALIAKYPDYTLEAVGHSLGGALTSIAHVALAQNFPD-KSL-VSNALNAF 162 (258)
T ss_dssp HHHHHHHHHHHHHSTTCEEEEEEETHHHHHHHHHHHHHHHHCTT-SCE-EEEEESCC
T ss_pred HHHHHHHHHHHHhCCCCeEEEeccCHHHHHHHHHHHHHHHhCCC-Cce-eEEEecCC
Confidence 46666777777889999999999999999998766542 22 134 34556555
|
| >3uue_A LIP1, secretory lipase (family 3); LID-domain, hydrolase; HET: NAG BMA MAN; 1.45A {Malassezia globosa} PDB: 3uuf_A* | Back alignment and structure |
|---|
Probab=94.83 E-value=0.027 Score=56.19 Aligned_cols=54 Identities=15% Similarity=0.089 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCC--CCCccEEEEEcCCc
Q 008093 217 EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGE--KTPVAGAAAICSPW 270 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~--~~~V~~~Vlis~p~ 270 (578)
+++.+.++.+.+++|..++++.||||||.+|...+..... ......++..++|-
T Consensus 122 ~~~~~~l~~~~~~~p~~~l~vtGHSLGGalA~l~a~~l~~~~~~~~~~~~tfg~Pr 177 (279)
T 3uue_A 122 DDIFTAVKKYKKEKNEKRVTVIGHSLGAAMGLLCAMDIELRMDGGLYKTYLFGLPR 177 (279)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHHHHHHHSTTCCSEEEEESCCC
T ss_pred HHHHHHHHHHHHhCCCceEEEcccCHHHHHHHHHHHHHHHhCCCCceEEEEecCCC
Confidence 4666677777778888999999999999999876654211 01344566676664
|
| >3dcn_A Cutinase, cutin hydrolase; catalytic triad, secreted, serine esterase; 1.90A {Glomerella cingulata} SCOP: c.69.1.0 PDB: 3dd5_A 3dea_A* | Back alignment and structure |
|---|
Probab=94.20 E-value=0.073 Score=50.20 Aligned_cols=56 Identities=16% Similarity=0.274 Sum_probs=46.0
Q ss_pred hHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCC--CCCccEEEEEcCCcc
Q 008093 216 TEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGE--KTPVAGAAAICSPWD 271 (578)
Q Consensus 216 ~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~--~~~V~~~Vlis~p~d 271 (578)
..|+...++....+.|+.+++++|+|.|+.++-..+...+. ..+|.++++++.|..
T Consensus 88 ~~~~~~~i~~~~~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGdP~~ 145 (201)
T 3dcn_A 88 INEARRLFTLANTKCPNAAIVSGGYSQGTAVMAGSISGLSTTIKNQIKGVVLFGYTKN 145 (201)
T ss_dssp HHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHTTSCHHHHHHEEEEEEETCTTT
T ss_pred HHHHHHHHHHHHHhCCCCcEEEEeecchhHHHHHHHhcCChhhhhheEEEEEeeCccc
Confidence 46888888888889999999999999999999887765442 116899999987753
|
| >3aja_A Putative uncharacterized protein; alpha-beta hydrolase, serine esterase, cutinase, lipase, HYD; 2.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=94.14 E-value=0.28 Score=49.19 Aligned_cols=84 Identities=15% Similarity=0.129 Sum_probs=55.4
Q ss_pred CCceEEEEeCCCCCCCCCC--CCCCCCCC---chHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcC------C
Q 008093 188 RGWNVVVSNHRGLGGVSIT--SDCFYNAG---WTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEG------E 256 (578)
Q Consensus 188 ~Gy~Vvv~D~RG~G~S~~~--~~~~~~~~---~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p------~ 256 (578)
....++.++|+-.-.-... ....|... =+.++...++....+.|+.+++++|+|.|+.++-..+...+ .
T Consensus 83 ~~v~v~~V~YPA~~~~~~~~~~~~~Y~~S~~~G~~~~~~~i~~~~~~CP~TkiVL~GYSQGA~V~~~~~~~i~~g~~~~~ 162 (302)
T 3aja_A 83 DRLQVYTTPYTAQFHNPFAADKQMSYNDSRAEGMRTTVKAMTDMNDRCPLTSYVIAGFSQGAVIAGDIASDIGNGRGPVD 162 (302)
T ss_dssp TTEEEEECCCCCCCCCTTTTCCCCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHHHTTCSSSC
T ss_pred CcceEEeccccccccccccccccccccccHHHHHHHHHHHHHHHHhhCCCCcEEEEeeCchHHHHHHHHHhccCCCCCCC
Confidence 3466778888764321110 01112111 13577777888888899999999999999999988775422 1
Q ss_pred CCCccEEEEEcCCcc
Q 008093 257 KTPVAGAAAICSPWD 271 (578)
Q Consensus 257 ~~~V~~~Vlis~p~d 271 (578)
..+|+++++++.|..
T Consensus 163 ~~~V~aVvLfGdP~r 177 (302)
T 3aja_A 163 EDLVLGVTLIADGRR 177 (302)
T ss_dssp GGGEEEEEEESCTTC
T ss_pred hHHEEEEEEEeCCCC
Confidence 126999999997754
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=93.82 E-value=0.011 Score=75.73 Aligned_cols=94 Identities=11% Similarity=0.081 Sum_probs=0.0
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHH-HHHHHHHHHHCCCCcEEEE
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDA-REVIGYLHHEYPKAPLFAI 238 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl-~~~i~~l~~~~~~~~i~lv 238 (578)
++.++++|+.+| +...| ..++..+. ..|+.+.++|. . +. ...+++ ...++.++...|..|..++
T Consensus 2242 ~~~Lfc~~~agG-~~~~y-~~l~~~l~---~~v~~lq~pg~--~----~~----~~i~~la~~~~~~i~~~~p~gpy~L~ 2306 (2512)
T 2vz8_A 2242 ERPLFLVHPIEG-SITVF-HGLAAKLS---IPTYGLQCTGA--A----PL----DSIQSLASYYIECIRQVQPEGPYRIA 2306 (2512)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCeEEeCCccc-cHHHH-HHHHHhhC---CcEEEEecCCC--C----CC----CCHHHHHHHHHHHHHHhCCCCCEEEE
Confidence 356888998855 44445 56666653 67888888771 0 10 011112 2233444444456689999
Q ss_pred EEchHHHHHHHHHhhcCCC-CCcc---EEEEEcC
Q 008093 239 GTSIGANILVKYLGEEGEK-TPVA---GAAAICS 268 (578)
Q Consensus 239 GhSmGG~ial~ya~~~p~~-~~V~---~~Vlis~ 268 (578)
||||||.++..++.+.... ..+. .++++++
T Consensus 2307 G~S~Gg~lA~evA~~L~~~G~~v~~~~~L~llDg 2340 (2512)
T 2vz8_A 2307 GYSYGACVAFEMCSQLQAQQSATPGNHSLFLFDG 2340 (2512)
T ss_dssp ----------------------------------
T ss_pred EECHhHHHHHHHHHHHHHcCCCCCccceEEEEeC
Confidence 9999999999887654321 1343 4555554
|
| >3qpd_A Cutinase 1; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted, phosphorylated Ser residue; HET: SEP; 1.57A {Aspergillus oryzae} PDB: 3gbs_A | Back alignment and structure |
|---|
Probab=93.77 E-value=0.097 Score=48.78 Aligned_cols=55 Identities=13% Similarity=0.177 Sum_probs=44.9
Q ss_pred hHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCC--CCCccEEEEEcCCc
Q 008093 216 TEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGE--KTPVAGAAAICSPW 270 (578)
Q Consensus 216 ~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~--~~~V~~~Vlis~p~ 270 (578)
.+++..+++....+.|+.+++++|+|.|+.++-..+...+. ..+|.++++++.|.
T Consensus 76 ~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGdP~ 132 (187)
T 3qpd_A 76 IAEAQGLFEQAVSKCPDTQIVAGGYSQGTAVMNGAIKRLSADVQDKIKGVVLFGYTR 132 (187)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHTTSCHHHHHHEEEEEEESCTT
T ss_pred HHHHHHHHHHHHHhCCCCcEEEEeeccccHHHHhhhhcCCHhhhhhEEEEEEeeCCc
Confidence 46777888888889999999999999999999888765542 12699999998775
|
| >2czq_A Cutinase-like protein; alpha/beta hydrolase fold, hydrolase; HET: CIT; 1.05A {Cryptococcus SP} | Back alignment and structure |
|---|
Probab=93.21 E-value=0.11 Score=49.22 Aligned_cols=101 Identities=22% Similarity=0.122 Sum_probs=63.8
Q ss_pred EEEEECCCCCCCcc--HHHHHHHHH-HHh-CCceEEEEeCCCCCCCCCCCCCCCC-CCchHHHHHHHHHHHHHCCCCcEE
Q 008093 162 IAIVIPGLTSDSAA--SYIRHLVFN-TAK-RGWNVVVSNHRGLGGVSITSDCFYN-AGWTEDAREVIGYLHHEYPKAPLF 236 (578)
Q Consensus 162 iVVllHGl~G~s~~--~yi~~l~~~-l~~-~Gy~Vvv~D~RG~G~S~~~~~~~~~-~~~~~Dl~~~i~~l~~~~~~~~i~ 236 (578)
.||+..|.+-.... .. ..++.. |.. .|-+...++|+-.-. |. ..-..|+...|+....+.|+.+++
T Consensus 10 ~vi~ARGT~E~~~~G~~g-~~~~~~vl~~~~g~~~~~V~YpA~~~--------y~S~~G~~~~~~~i~~~~~~CP~tkiv 80 (205)
T 2czq_A 10 VLINTRGTGEPQGQSAGF-RTMNSQITAALSGGTIYNTVYTADFS--------QNSAAGTADIIRRINSGLAANPNVCYI 80 (205)
T ss_dssp EEEEECCTTCCSSSCTTT-HHHHHHHHHHSSSEEEEECCSCCCTT--------CCCHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred EEEEecCCCCCCCCCccc-HHHHHHHHHhccCCCceeecccccCC--------CcCHHHHHHHHHHHHHHHhhCCCCcEE
Confidence 46666665322111 11 344444 433 243446666664211 21 122468888888888889999999
Q ss_pred EEEEchHHHHHHHHHhhc--CCC--CCccEEEEEcCCcc
Q 008093 237 AIGTSIGANILVKYLGEE--GEK--TPVAGAAAICSPWD 271 (578)
Q Consensus 237 lvGhSmGG~ial~ya~~~--p~~--~~V~~~Vlis~p~d 271 (578)
++|+|.|+.++-..+... +.. .+|.++++++.|..
T Consensus 81 l~GYSQGA~V~~~~~~~lg~~~~~~~~V~avvlfGdP~~ 119 (205)
T 2czq_A 81 LQGYSQGAAATVVALQQLGTSGAAFNAVKGVFLIGNPDH 119 (205)
T ss_dssp EEEETHHHHHHHHHHHHHCSSSHHHHHEEEEEEESCTTC
T ss_pred EEeeCchhHHHHHHHHhccCChhhhhhEEEEEEEeCCCc
Confidence 999999999998877665 321 15999999987753
|
| >2ory_A Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Photobacterium SP} | Back alignment and structure |
|---|
Probab=86.82 E-value=0.47 Score=48.60 Aligned_cols=24 Identities=21% Similarity=0.076 Sum_probs=19.8
Q ss_pred CCCCcEEEEEEchHHHHHHHHHhh
Q 008093 230 YPKAPLFAIGTSIGANILVKYLGE 253 (578)
Q Consensus 230 ~~~~~i~lvGhSmGG~ial~ya~~ 253 (578)
++..++++.|||+||.+|...+..
T Consensus 163 ~~~~~i~vtGHSLGGAlA~l~a~~ 186 (346)
T 2ory_A 163 EGKAKICVTGHSKGGALSSTLALW 186 (346)
T ss_dssp TCCEEEEEEEETHHHHHHHHHHHH
T ss_pred cCCceEEEecCChHHHHHHHHHHH
Confidence 346789999999999999876654
|
| >2yij_A Phospholipase A1-iigamma; hydrolase; 2.00A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=83.64 E-value=0.24 Score=51.92 Aligned_cols=38 Identities=18% Similarity=0.298 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHCCC--CcEEEEEEchHHHHHHHHHhhc
Q 008093 217 EDAREVIGYLHHEYPK--APLFAIGTSIGANILVKYLGEE 254 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~~--~~i~lvGhSmGG~ial~ya~~~ 254 (578)
+.+.+.++.+..++|+ .++++.|||+||.+|...+...
T Consensus 210 ~~Vl~~l~~ll~~yp~~~~~I~vTGHSLGGALA~L~A~~L 249 (419)
T 2yij_A 210 DQVLREVGRLLEKYKDEEVSITICGHSLGAALATLSATDI 249 (419)
Confidence 4556666666677765 6899999999999998766543
|
| >1whs_B Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1wht_B* 1bcs_B* 1bcr_B* 3sc2_B* | Back alignment and structure |
|---|
Probab=80.07 E-value=1.6 Score=38.97 Aligned_cols=61 Identities=15% Similarity=0.120 Sum_probs=42.1
Q ss_pred ccceEEEEeCCCCCCCCCCcchHHHhc-----------------------CCCEEEEEeCCCCccccccccccCcccHHH
Q 008093 356 SIPLLCISSLDDPVCTVEAIPWDECRA-----------------------NKNVVLATTWHGGHLAFFEGLTAAGMWWVR 412 (578)
Q Consensus 356 ~vPvLiI~g~dDpivp~~~~~~~~~~~-----------------------~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~ 412 (578)
.+++|+.+|..|-+|+.-......... ..+..++.+.++||+.-.+. | ....+
T Consensus 64 girvlIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~vaG~~~~~~~Ltf~~V~~AGHmVP~dq--P--~~a~~ 139 (153)
T 1whs_B 64 GLRIWVFSGDTDAVVPLTATRYSIGALGLPTTTSWYPWYDDQEVGGWSQVYKGLTLVSVRGAGHEVPLHR--P--RQALV 139 (153)
T ss_dssp TCEEEEEEETTCSSSCHHHHHHHHHTTTCCEEEEEEEEEETTEEEEEEEEETTEEEEEETTCCSSHHHHS--H--HHHHH
T ss_pred CceEEEEecCcCcccccHhHHHHHHhCCCCCcccccceeECCCccEEEEEeCeEEEEEECCCcccCcccC--H--HHHHH
Confidence 689999999999999864322211111 14789999999999987662 3 24566
Q ss_pred HHHHHHHh
Q 008093 413 AVNEYLGV 420 (578)
Q Consensus 413 ~v~eFL~~ 420 (578)
.+..||..
T Consensus 140 m~~~fl~~ 147 (153)
T 1whs_B 140 LFQYFLQG 147 (153)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHCC
Confidence 77777664
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 578 | ||||
| d1thta_ | 302 | c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase | 7e-06 | |
| d1brta_ | 277 | c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces au | 1e-04 | |
| d1tcaa_ | 317 | c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Cand | 2e-04 | |
| d1k8qa_ | 377 | c.69.1.6 (A:) Gastric lipase {Dog (Canis familiari | 7e-04 | |
| d1lnsa3 | 405 | c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopep | 0.004 |
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Score = 45.7 bits (107), Expect = 7e-06
Identities = 29/222 (13%), Positives = 61/222 (27%), Gaps = 33/222 (14%)
Query: 155 SKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN-A 213
+ ++ G + L + G++V + G+S S +
Sbjct: 27 NVPFKNNTILIASGFARRM--DHFAGLAEYLSTNGFHVFRYDSLHHVGLSSGSIDEFTMT 84
Query: 214 GWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL 273
V +L + + + I S+ A + + + + + +
Sbjct: 85 TGKNSLCTVYHWLQTKGTQ-NIGLIAASLSARVAYEVISDLELSFLITAVGVV------- 136
Query: 274 IGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLV 333
+ D DY L ++EG K + D
Sbjct: 137 ------------NLRDTLEKALGFDYLSLPIDELPNDLDFEGHKLGSEVFVRDCFEHHWD 184
Query: 334 GKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAI 375
T+D V N S+PL+ ++ +D E +
Sbjct: 185 TLDSTLD----------KVANTSVPLIAFTANNDDWVKQEEV 216
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Score = 41.8 bits (96), Expect = 1e-04
Identities = 30/241 (12%), Positives = 57/241 (23%), Gaps = 2/241 (0%)
Query: 161 PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAR 220
++I G G+ V+ + RG G S + + + D
Sbjct: 24 QPVVLIHGFPLSGH--SWERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAADLN 81
Query: 221 EVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIG 280
V+ L + F+ GT A + Y K + D
Sbjct: 82 TVLETLDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAP 141
Query: 281 RRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVD 340
+ I Y Y+ N ++R+ + A
Sbjct: 142 QEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAA 201
Query: 341 TYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFF 400
+ + +P L + D +E +A + H +
Sbjct: 202 PTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLW 261
Query: 401 E 401
Sbjct: 262 T 262
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Score = 41.3 bits (96), Expect = 2e-04
Identities = 15/115 (13%), Positives = 32/115 (27%), Gaps = 9/115 (7%)
Query: 157 DDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWT 216
+ PI +++PG + S+ + + + + G+ + +
Sbjct: 29 SVSKPI-LLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLNDTQVNT------- 80
Query: 217 EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTP-VAGAAAICSPW 270
E I L+ L + S G + L V A +
Sbjct: 81 EYMVNAITALYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDY 135
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} Length = 377 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Score = 39.7 bits (91), Expect = 7e-04
Identities = 36/305 (11%), Positives = 78/305 (25%), Gaps = 59/305 (19%)
Query: 161 PIAIVIPGLTSDSAA----SYIRHLVFNTAKRGWNVVVSNHRGLGGV------SITSDCF 210
P+A + GL + + L F A G++V + N RG S S F
Sbjct: 59 PVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNTWARRNLYYSPDSVEF 118
Query: 211 YNAGWTE----DAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAI 266
+ + E D I ++ + + L +G S G I +
Sbjct: 119 WAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYA 178
Query: 267 CSPWDLLIGDRFIGRRLIQKIYD---------------------RALTIGLQDYAQLHEP 305
+P + + +L+ + L
Sbjct: 179 LAPVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSN 238
Query: 306 RYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTY-------------- 351
+ ++ + + S D + V + + S +
Sbjct: 239 ALFIICGFDTMNLNMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMH 298
Query: 352 ----------VGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFE 401
+ ++ +P+ + +D + + + + HL F
Sbjct: 299 YHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVDLLLSKLPNLIYHRKIPPYNHLDFIW 358
Query: 402 GLTAA 406
+ A
Sbjct: 359 AMDAP 363
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} Length = 405 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Score = 37.2 bits (85), Expect = 0.004
Identities = 23/204 (11%), Positives = 41/204 (20%), Gaps = 23/204 (11%)
Query: 186 AKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAP----------- 234
RG+ + G S + VI +L+
Sbjct: 133 LTRGFASIYVAGVGTRS-SDGFQTSGDYQQIYSMTAVIDWLNGRARAYTSRKKTHEIKAS 191
Query: 235 -----LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYD 289
+ G S + E + A R G +
Sbjct: 192 WANGKVAMTGKSYLGTMAYGAATTGVE--GLELILAEAGISSWYNYYRENGLVRSPGGFP 249
Query: 290 RALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSS 349
L + + R L K + ++ + +
Sbjct: 250 GEDLDVLAALTYSRNLDGADFLKGNAEYEKR----LAEMTAALDRKSGDYNQFWHDRNYL 305
Query: 350 TYVGNVSIPLLCISSLDDPVCTVE 373
V +L + L D T E
Sbjct: 306 INTDKVKADVLIVHGLQDWNVTPE 329
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 578 | |||
| d1a8qa_ | 274 | Bromoperoxidase A1 {Streptomyces aureofaciens [Tax | 99.94 | |
| d1a88a_ | 275 | Chloroperoxidase L {Streptomyces lividans [TaxId: | 99.93 | |
| d1k8qa_ | 377 | Gastric lipase {Dog (Canis familiaris) [TaxId: 961 | 99.92 | |
| d1mtza_ | 290 | Tricorn interacting factor F1 {Archaeon Thermoplas | 99.92 | |
| d1a8sa_ | 273 | Chloroperoxidase F {Pseudomonas fluorescens [TaxId | 99.92 | |
| d1q0ra_ | 297 | Aclacinomycin methylesterase RdmC {Streptomyces pu | 99.92 | |
| d1brta_ | 277 | Bromoperoxidase A2 {Streptomyces aureofaciens [Tax | 99.91 | |
| d1zd3a2 | 322 | Mammalian epoxide hydrolase, C-terminal domain {Hu | 99.91 | |
| d1j1ia_ | 268 | Meta cleavage compound hydrolase CarC {Janthinobac | 99.91 | |
| d1va4a_ | 271 | Arylesterase {Pseudomonas fluorescens [TaxId: 294] | 99.91 | |
| d1hkha_ | 279 | Gamma-lactamase {Aureobacterium sp. [TaxId: 51671] | 99.91 | |
| d1bn7a_ | 291 | Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1 | 99.9 | |
| d1uk8a_ | 271 | Meta-cleavage product hydrolase CumD {Pseudomonas | 99.9 | |
| d1imja_ | 208 | Ccg1/TafII250-interacting factor B (Cib) {Human (H | 99.9 | |
| d1thta_ | 302 | Myristoyl-ACP-specific thioesterase {Vibrio harvey | 99.9 | |
| d1c4xa_ | 281 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 99.9 | |
| d1m33a_ | 256 | Biotin biosynthesis protein BioH {Escherichia coli | 99.9 | |
| d1ehya_ | 293 | Bacterial epoxide hydrolase {Agrobacterium radioba | 99.9 | |
| d1tqha_ | 242 | Carboxylesterase Est {Bacillus stearothermophilus | 99.89 | |
| d2rhwa1 | 283 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 99.89 | |
| d1azwa_ | 313 | Proline iminopeptidase {Xanthomonas campestris, pv | 99.89 | |
| d2fuka1 | 218 | XC6422 protein {Xanthomonas campestris [TaxId: 339 | 99.89 | |
| d3c70a1 | 256 | Hydroxynitrile lyase {Rubber tree (Hevea brasilien | 99.89 | |
| d1xkla_ | 258 | Salicylic acid-binding protein 2 (SABP2) {Common t | 99.88 | |
| d1r3da_ | 264 | Hypothetical protein VC1974 {Vibrio cholerae [TaxI | 99.87 | |
| d2jbwa1 | 360 | 2,6-dihydropseudooxynicotine hydrolase {Arthrobact | 99.87 | |
| d1b6ga_ | 310 | Haloalkane dehalogenase {Xanthobacter autotrophicu | 99.86 | |
| d1mj5a_ | 298 | Haloalkane dehalogenase {Sphingomonas paucimobilis | 99.85 | |
| d1wm1a_ | 313 | Proline aminopeptidase {Serratia marcescens [TaxId | 99.84 | |
| d1l7aa_ | 318 | Cephalosporin C deacetylase {Bacillus subtilis [Ta | 99.84 | |
| d2hu7a2 | 260 | Acylamino-acid-releasing enzyme, C-terminal donain | 99.83 | |
| d1vlqa_ | 322 | Acetyl xylan esterase TM0077 {Thermotoga maritima | 99.8 | |
| d1uxoa_ | 186 | Hypothetical protein YdeN {Bacillus subtilis [TaxI | 99.8 | |
| d1pjaa_ | 268 | Palmitoyl protein thioesterase 2 {Human (Homo sapi | 99.77 | |
| d1qo7a_ | 394 | Bacterial epoxide hydrolase {Aspergillus niger [Ta | 99.75 | |
| d2bgra2 | 258 | Dipeptidyl peptidase IV/CD26, C-terminal domain {P | 99.73 | |
| d2i3da1 | 218 | Hypothetical protein Atu1826 {Agrobacterium tumefa | 99.73 | |
| d1ufoa_ | 238 | Hypothetical protein TT1662 {Thermus thermophilus | 99.72 | |
| d1jmkc_ | 230 | Surfactin synthetase, SrfA {Bacillus subtilis [Tax | 99.69 | |
| d2h7xa1 | 283 | Picromycin polyketide synthase {Streptomyces venez | 99.68 | |
| d1jfra_ | 260 | Lipase {Streptomyces exfoliatus [TaxId: 1905]} | 99.68 | |
| d1ispa_ | 179 | Lipase A {Bacillus subtilis [TaxId: 1423]} | 99.67 | |
| d1ju3a2 | 347 | Bacterial cocaine esterase N-terminal domain {Rhod | 99.67 | |
| d1xfda2 | 258 | Dipeptidyl aminopeptidase-like protein 6, DPP6, C- | 99.64 | |
| d2pbla1 | 261 | Uncharacterized protein TM1040_2492 {Silicibacter | 99.62 | |
| d1dina_ | 233 | Dienelactone hydrolase {Pseudomonas sp., B13 [TaxI | 99.58 | |
| d1mpxa2 | 381 | Alpha-amino acid ester hydrolase {Xanthomonas citr | 99.57 | |
| d1vkha_ | 263 | Putative serine hydrolase Ydr428c {Baker's yeast ( | 99.57 | |
| d1xkta_ | 286 | Fatty acid synthase {Human (Homo sapiens) [TaxId: | 99.55 | |
| d2vata1 | 376 | Acetyl-CoA:deacetylcephalosporin C acetyltransfera | 99.51 | |
| d1qlwa_ | 318 | A novel bacterial esterase {Alcaligenes sp. [TaxId | 99.5 | |
| d2h1ia1 | 202 | Carboxylesterase {Bacillus cereus [TaxId: 1396]} | 99.49 | |
| d1fj2a_ | 229 | Acyl protein thioesterase 1 {Human (Homo sapiens) | 99.49 | |
| d2b61a1 | 357 | Homoserine O-acetyltransferase {Haemophilus influe | 99.49 | |
| d1tcaa_ | 317 | Triacylglycerol lipase {Yeast (Candida antarctica) | 99.45 | |
| d1lnsa3 | 405 | X-Prolyl dipeptidyl aminopeptidase PepX, middle do | 99.45 | |
| d2b9va2 | 385 | Alpha-amino acid ester hydrolase {Acetobacter past | 99.43 | |
| d3b5ea1 | 209 | Uncharacterized protein Mll8374 {Mesorhizobium lot | 99.43 | |
| d1lzla_ | 317 | Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | 99.42 | |
| d1mo2a_ | 255 | Erythromycin polyketide synthase {Saccharopolyspor | 99.41 | |
| d2pl5a1 | 362 | Homoserine O-acetyltransferase {Leptospira interro | 99.41 | |
| d2r8ba1 | 203 | Uncharacterized protein Atu2452 {Agrobacterium tum | 99.4 | |
| d1jkma_ | 358 | Carboxylesterase {Bacillus subtilis, brefeldin A e | 99.36 | |
| d1cvla_ | 319 | Lipase {Chromobacterium viscosum [TaxId: 42739]} | 99.36 | |
| d1jjia_ | 311 | Carboxylesterase {Archaeon Archaeoglobus fulgidus | 99.35 | |
| d1u4na_ | 308 | Carboxylesterase {Alicyclobacillus acidocaldarius | 99.29 | |
| d1ex9a_ | 285 | Lipase {Pseudomonas aeruginosa [TaxId: 287]} | 99.26 | |
| d1auoa_ | 218 | Carboxylesterase {Pseudomonas fluorescens [TaxId: | 99.24 | |
| d1qfma2 | 280 | Prolyl oligopeptidase, C-terminal domain {Pig (Sus | 99.23 | |
| d1jjfa_ | 255 | Feruloyl esterase domain of the cellulosomal xylan | 99.1 | |
| d2dsta1 | 122 | Hypothetical protein TTHA1544 {Thermus thermophilu | 99.06 | |
| d1sfra_ | 288 | Antigen 85a {Mycobacterium tuberculosis [TaxId: 17 | 98.95 | |
| d1r88a_ | 267 | Antigen pt51/mpb51 {Mycobacterium tuberculosis [Ta | 98.92 | |
| d1wb4a1 | 273 | Feruloyl esterase domain of the cellulosomal xylan | 98.8 | |
| d1dqza_ | 280 | Antigen 85c {Mycobacterium tuberculosis [TaxId: 17 | 98.78 | |
| d3c8da2 | 246 | Enterochelin esterase, catalytic domain {Shigella | 98.77 | |
| d1rp1a2 | 337 | Pancreatic lipase, N-terminal domain {Dog (Canis f | 98.7 | |
| d1bu8a2 | 338 | Pancreatic lipase, N-terminal domain {Rat (Rattus | 98.57 | |
| d1ei9a_ | 279 | Palmitoyl protein thioesterase 1 {Cow (Bos taurus) | 98.52 | |
| d1pv1a_ | 299 | Hypothetical esterase YJL068C {Baker's yeast (Sacc | 98.42 | |
| d2gzsa1 | 265 | Enterobactin and salmochelin hydrolase IroE {Esche | 98.35 | |
| d1ku0a_ | 388 | Lipase L1 {Bacillus stearothermophilus [TaxId: 142 | 97.78 | |
| d2d81a1 | 318 | Polyhydroxybutyrate depolymerase {Penicillium funi | 97.55 | |
| d1qe3a_ | 483 | Thermophilic para-nitrobenzyl esterase (PNB estera | 97.45 | |
| d2ha2a1 | 542 | Acetylcholinesterase {Mouse (Mus musculus) [TaxId: | 97.43 | |
| g1wht.1 | 409 | Serine carboxypeptidase II {Wheat (Triticum vulgar | 97.31 | |
| d2h7ca1 | 532 | Mammalian carboxylesterase (liver carboxylesterase | 97.27 | |
| d1p0ia_ | 526 | Butyryl cholinesterase {Human (Homo sapiens) [TaxI | 97.02 | |
| d1ea5a_ | 532 | Acetylcholinesterase {Pacific electric ray (Torped | 96.96 | |
| d1ukca_ | 517 | Esterase EstA {Aspergillus niger [TaxId: 5061]} | 96.79 | |
| d1llfa_ | 534 | Type-B carboxylesterase/lipase {Candida cylindrace | 96.75 | |
| d1thga_ | 544 | Type-B carboxylesterase/lipase {Fungus (Geotrichum | 96.52 | |
| d1wpxa1 | 421 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 96.42 | |
| d1dx4a_ | 571 | Acetylcholinesterase {Fruit fly (Drosophila melano | 96.37 | |
| d2bcea_ | 579 | Bile-salt activated lipase (cholesterol esterase) | 96.33 | |
| d1ivya_ | 452 | Human 'protective protein', HPP {Human (Homo sapie | 96.06 | |
| d1uwca_ | 261 | Feruloyl esterase A {Aspergillus niger [TaxId: 506 | 95.85 | |
| d1tiba_ | 269 | Triacylglycerol lipase {Thermomyces lanuginosus, f | 95.71 | |
| d1qoza_ | 207 | Acetylxylan esterase {Trichoderma reesei [TaxId: 5 | 95.01 | |
| d1tiaa_ | 271 | Triacylglycerol lipase {Penicillium camembertii [T | 94.91 | |
| d1lgya_ | 265 | Triacylglycerol lipase {Rhizopus niveus [TaxId: 48 | 94.7 | |
| d1g66a_ | 207 | Acetylxylan esterase {Penicillium purpurogenum [Ta | 94.67 | |
| d3tgla_ | 265 | Triacylglycerol lipase {Rhizomucor miehei [TaxId: | 94.5 | |
| d1cexa_ | 197 | Cutinase {Fungus (Fusarium solani), subsp. pisi [T | 94.12 | |
| d1ac5a_ | 483 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 90.47 | |
| g1gxs.1 | 425 | Hydroxynitrile lyase {Sorghum (Sorghum bicolor) [T | 90.2 |
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=99.94 E-value=2.4e-26 Score=224.97 Aligned_cols=261 Identities=15% Similarity=0.142 Sum_probs=154.6
Q ss_pred EEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCC
Q 008093 124 LFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGV 203 (578)
Q Consensus 124 ~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S 203 (578)
+++++||..+++.-. .+.|+||++||+++ +...| +.+++.|.++||+|+++|+||||.|
T Consensus 2 ~~~t~dG~~l~y~~~-------------------G~g~~ivlvHG~~~-~~~~~-~~~~~~l~~~g~~vi~~D~~G~G~S 60 (274)
T d1a8qa_ 2 ICTTRDGVEIFYKDW-------------------GQGRPVVFIHGWPL-NGDAW-QDQLKAVVDAGYRGIAHDRRGHGHS 60 (274)
T ss_dssp EEECTTSCEEEEEEE-------------------CSSSEEEEECCTTC-CGGGG-HHHHHHHHHTTCEEEEECCTTSTTS
T ss_pred eEECcCCCEEEEEEE-------------------CCCCeEEEECCCCC-CHHHH-HHHHHHHHHCCCEEEEEeCCCCccc
Confidence 578999988775422 12356899999965 44455 6788889999999999999999999
Q ss_pred CCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhc-CCCCCccEEEEEcCCcchhhh----hHH
Q 008093 204 SITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEE-GEKTPVAGAAAICSPWDLLIG----DRF 278 (578)
Q Consensus 204 ~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~-p~~~~V~~~Vlis~p~d~~~~----~~~ 278 (578)
+............+|+.++++.+ ...+++++||||||.+++.+++++ ++ +|++++++++....... ...
T Consensus 61 ~~~~~~~~~~~~~~dl~~~l~~l----~~~~~~lvGhS~Gg~~~~~~~a~~~p~--~v~~~~~~~~~~~~~~~~~~~~~~ 134 (274)
T d1a8qa_ 61 TPVWDGYDFDTFADDLNDLLTDL----DLRDVTLVAHSMGGGELARYVGRHGTG--RLRSAVLLSAIPPVMIKSDKNPDG 134 (274)
T ss_dssp CCCSSCCSHHHHHHHHHHHHHHT----TCCSEEEEEETTHHHHHHHHHHHHCST--TEEEEEEESCCCSCCBCCSSCTTS
T ss_pred ccccccccchhhHHHHHHHHHHh----hhhhhcccccccccchHHHHHHHhhhc--cceeEEEEeccCccchhhhhccch
Confidence 76533222223335555555443 456899999999999999988876 45 79999999863221110 000
Q ss_pred HhhHHHHHHHHHHHH---HhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhh----hccCCCCCHHHHHHhCCcccc
Q 008093 279 IGRRLIQKIYDRALT---IGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHAT----CLVGKFETVDTYYRNCSSSTY 351 (578)
Q Consensus 279 l~~~~~~~~~~~~l~---~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~----~~~~g~~~~~~yy~~~s~~~~ 351 (578)
........+...... .......... +..... .........+.... ....++......+...+....
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (274)
T d1a8qa_ 135 VPDEVFDALKNGVLTERSQFWKDTAEGF---FSANRP----GNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTED 207 (274)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHHHHHHH---TTTTST----TCCCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHCCCHHH
T ss_pred hhHHHHHHHHhhhhhhhHHHhhhhhhhh---hhcccc----chhhhhhHHHHHHHhhhccchhhhhhHHHHhhccchHHH
Confidence 000000111010000 0001111100 000000 00000000010000 000011112222334445567
Q ss_pred cCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHh
Q 008093 352 VGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 352 l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
+.+|++|+|+|+|++|+++|.+.......+..++.++.+++++||+.+++. .++..+.+.|.+||++
T Consensus 208 l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~~~--~~p~~~~~~i~~FL~k 274 (274)
T d1a8qa_ 208 LKKFDIPTLVVHGDDDQVVPIDATGRKSAQIIPNAELKVYEGSSHGIAMVP--GDKEKFNRDLLEFLNK 274 (274)
T ss_dssp HTTCCSCEEEEEETTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTTTTST--THHHHHHHHHHHHHTC
T ss_pred HHhccceeeeeccCCCCCcCHHHHHHHHHHhCCCCEEEEECCCCCcccccc--cCHHHHHHHHHHHHCc
Confidence 889999999999999999998755444556678999999999999988763 2334688999999874
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Probab=99.93 E-value=8.9e-26 Score=220.65 Aligned_cols=265 Identities=14% Similarity=0.082 Sum_probs=157.8
Q ss_pred EEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCC
Q 008093 124 LFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGV 203 (578)
Q Consensus 124 ~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S 203 (578)
++++.||.+|++..+.+ ++.|+|||+||+++ +...| ..++..|.++||+|+++|+||||.|
T Consensus 2 ~i~~~dG~~l~y~~~G~-----------------~~~~~vv~lHG~~~-~~~~~-~~~~~~l~~~g~~vi~~D~~G~G~s 62 (275)
T d1a88a_ 2 TVTTSDGTNIFYKDWGP-----------------RDGLPVVFHHGWPL-SADDW-DNQMLFFLSHGYRVIAHDRRGHGRS 62 (275)
T ss_dssp EEECTTSCEEEEEEESC-----------------TTSCEEEEECCTTC-CGGGG-HHHHHHHHHTTCEEEEECCTTSTTS
T ss_pred EEEecCCCEEEEEEecC-----------------CCCCeEEEECCCCC-CHHHH-HHHHHHHHhCCCEEEEEeccccccc
Confidence 57899999999887653 23467899999965 44455 6788899899999999999999999
Q ss_pred CCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchH-HHHHHHHHhhcCCCCCccEEEEEcCCcchhhh----hHH
Q 008093 204 SITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIG-ANILVKYLGEEGEKTPVAGAAAICSPWDLLIG----DRF 278 (578)
Q Consensus 204 ~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmG-G~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~----~~~ 278 (578)
+..........+.+|+.++++++. ..+++++|||+| |.+++.++..+|+ +|+++|+++++...... ...
T Consensus 63 ~~~~~~~~~~~~~~~~~~~l~~l~----~~~~~~vg~s~~G~~~~~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~ 136 (275)
T d1a88a_ 63 DQPSTGHDMDTYAADVAALTEALD----LRGAVHIGHSTGGGEVARYVARAEPG--RVAKAVLVSAVPPVMVKSDTNPDG 136 (275)
T ss_dssp CCCSSCCSHHHHHHHHHHHHHHHT----CCSEEEEEETHHHHHHHHHHHHSCTT--SEEEEEEESCCCSCCBCBTTBTTS
T ss_pred cccccccccccccccccccccccc----ccccccccccccccchhhcccccCcc--hhhhhhhhcccccccccchhhhhh
Confidence 765432222345567777777653 457899999985 5555666778888 89999999864321110 000
Q ss_pred HhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhh-ccCC---CCCHHHHHHhCCcccccCC
Q 008093 279 IGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATC-LVGK---FETVDTYYRNCSSSTYVGN 354 (578)
Q Consensus 279 l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~-~~~g---~~~~~~yy~~~s~~~~l~~ 354 (578)
........+...........+.......+.. .............+..... .... +......+........+.+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 213 (275)
T d1a88a_ 137 LPLEVFDEFRAALAANRAQFYIDVPSGPFYG---FNREGATVSQGLIDHWWLQGMMGAANAHYECIAAFSETDFTDDLKR 213 (275)
T ss_dssp BCHHHHHHHHHHHHHCHHHHHHHHHHTTTTT---TTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHH
T ss_pred hhhhhhhhhhhhhhhhhHHHHHhhhhhhhhh---cccchhhHHHHHHHHHHHhhcccchHHHHHHHHHhhhhhhhHHHHh
Confidence 0011111111110000000000000000000 0000000000000100000 0001 1111122233444456778
Q ss_pred CccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHh
Q 008093 355 VSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 355 I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
|++|+|+++|++|+++|.+.......+..+++++++++++||+.++|. |+ .+.+.|.+||++
T Consensus 214 i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~--p~--~~~~~i~~Fl~s 275 (275)
T d1a88a_ 214 IDVPVLVAHGTDDQVVPYADAAPKSAELLANATLKSYEGLPHGMLSTH--PE--VLNPDLLAFVKS 275 (275)
T ss_dssp CCSCEEEEEETTCSSSCSTTTHHHHHHHSTTEEEEEETTCCTTHHHHC--HH--HHHHHHHHHHHC
T ss_pred hccccceeecCCCCCcCHHHHHHHHHHhCCCCEEEEECCCCCchHHhC--HH--HHHHHHHHHHcC
Confidence 999999999999999998755444556678999999999999999983 33 588999999974
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.92 E-value=2.7e-26 Score=235.24 Aligned_cols=291 Identities=11% Similarity=0.076 Sum_probs=167.6
Q ss_pred CCCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHH----HHHHHHHHHhCCceE
Q 008093 117 CFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASY----IRHLVFNTAKRGWNV 192 (578)
Q Consensus 117 ~~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~y----i~~l~~~l~~~Gy~V 192 (578)
..+.+++.++++||..|.+.+....... ......+|+||++||+++++..+. ...++..|+++||+|
T Consensus 24 ~y~~e~h~v~t~DG~~l~~~ri~~~~~~---------~~~~~~~~~vlllHG~~~~~~~~~~~~~~~sla~~L~~~Gy~V 94 (377)
T d1k8qa_ 24 GYPAEEYEVVTEDGYILGIDRIPYGRKN---------SENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDV 94 (377)
T ss_dssp TCCCEEEEEECTTSEEEEEEEECSCSSC---------CTTTTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEE
T ss_pred CCCceEEEEEcCCCCEEEEEEecCCCCC---------CccCCCCCeEEEECCCccchhHHhhcCccchHHHHHHHCCCEE
Confidence 3566999999999999988765432210 122457789999999976655432 135889999999999
Q ss_pred EEEeCCCCCCCCCCCCCCCC------CC----chHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccE
Q 008093 193 VVSNHRGLGGVSITSDCFYN------AG----WTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAG 262 (578)
Q Consensus 193 vv~D~RG~G~S~~~~~~~~~------~~----~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~ 262 (578)
+++|+||||.|+........ .. ...|+.++++++.+..+..+++++||||||.+++.+|..+++ .+++
T Consensus 95 ~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~i~~i~~~~g~~~v~lvGhS~GG~ia~~~a~~~p~--~~~~ 172 (377)
T d1k8qa_ 95 WLGNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPK--LAKR 172 (377)
T ss_dssp EECCCTTSTTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCHH--HHTT
T ss_pred EEEcCCCCCCCCCCCCCCCcchhhccCCHHHHhhhhHHHHHHHHHHHcCCCCEEEEEecchHHHHHHHHHhhhh--hhhh
Confidence 99999999999754322111 11 135899999999999888999999999999999999999887 4544
Q ss_pred EEEEc---CCcchhhhh---HHHhhH------------------HHHHHHHHHH------HHhHHHHHhhhcccccccCC
Q 008093 263 AAAIC---SPWDLLIGD---RFIGRR------------------LIQKIYDRAL------TIGLQDYAQLHEPRYSRLAN 312 (578)
Q Consensus 263 ~Vlis---~p~d~~~~~---~~l~~~------------------~~~~~~~~~l------~~~l~~~~~~~~~~l~~~~d 312 (578)
+++++ ++....... ..+... .......... ...................+
T Consensus 173 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (377)
T d1k8qa_ 173 IKTFYALAPVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNLN 252 (377)
T ss_dssp EEEEEEESCCSCCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCGGGSC
T ss_pred ceeEeeccccccccchhhHHHHHHhcchhhhhhhhhhhhccchhHHHHhhhhhhcchhhhhHHHHhhhhhhcCCCccccc
Confidence 44433 222111100 000000 0000000000 00000000000000000000
Q ss_pred HHH---Hhc----c---CCHHHHHhhhhhcc-CCC--C----CHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCc
Q 008093 313 WEG---IKK----S---RSIRDFDSHATCLV-GKF--E----TVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAI 375 (578)
Q Consensus 313 ~~~---i~~----~---~s~~efd~~~~~~~-~g~--~----~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~ 375 (578)
... ... . .....+...+.... ..| . ....+.........+++|++|+|+|+|++|.+++++..
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~vPvL~i~G~~D~~~~~~~~ 332 (377)
T d1k8qa_ 253 MSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHDV 332 (377)
T ss_dssp GGGHHHHHTTCCCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSCHHHH
T ss_pred HHHhhhhhhcccccchHHHHHHHHHHHhcCcchhccchhhhhhhhhhcccCchhhhHhhCCCCEEEEEeCCCCccCHHHH
Confidence 000 000 0 01111211111110 011 1 11222222233456789999999999999999998866
Q ss_pred chHHHhcCCC-EEEEEeCCCCccccccccccCcccHHHHHHHHHHh
Q 008093 376 PWDECRANKN-VVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 376 ~~~~~~~~~~-~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
.. .....++ +...+++++||++++-+... ...+.+.|.+||++
T Consensus 333 ~~-l~~~lp~~~~~~~i~~~GH~d~~~~~~a-~~~v~~~I~~fl~~ 376 (377)
T d1k8qa_ 333 DL-LLSKLPNLIYHRKIPPYNHLDFIWAMDA-PQAVYNEIVSMMGT 376 (377)
T ss_dssp HH-HHTTCTTEEEEEEETTCCTTHHHHCTTH-HHHTHHHHHHHHHT
T ss_pred HH-HHHHCCCCeEEEEeCCCCCcchhhccch-HHHHHHHHHHHHhc
Confidence 54 3445555 47788999999988754322 23677889999974
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.92 E-value=4.4e-25 Score=216.34 Aligned_cols=266 Identities=12% Similarity=0.101 Sum_probs=155.1
Q ss_pred EEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCC
Q 008093 122 RQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLG 201 (578)
Q Consensus 122 r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G 201 (578)
..+++ -||.++++..+..+ +.+|+||++||++|++.. | ...+..+.++||+|+++|+||||
T Consensus 4 ~~~~~-~~g~~i~y~~~g~~----------------~~~~~iv~lHG~~g~~~~-~-~~~~~~~~~~~~~vi~~D~~G~G 64 (290)
T d1mtza_ 4 ENYAK-VNGIYIYYKLCKAP----------------EEKAKLMTMHGGPGMSHD-Y-LLSLRDMTKEGITVLFYDQFGCG 64 (290)
T ss_dssp EEEEE-ETTEEEEEEEECCS----------------SCSEEEEEECCTTTCCSG-G-GGGGGGGGGGTEEEEEECCTTST
T ss_pred cCeEE-ECCEEEEEEEcCCC----------------CCCCeEEEECCCCCchHH-H-HHHHHHHHHCCCEEEEEeCCCCc
Confidence 34454 48988887665432 356889999999776665 4 34555677889999999999999
Q ss_pred CCCCCCCCCCC-CCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHh
Q 008093 202 GVSITSDCFYN-AGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIG 280 (578)
Q Consensus 202 ~S~~~~~~~~~-~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~ 280 (578)
.|+......++ ..+.+|+.++++++. +..+++++||||||.+++.+|.++|+ +|+++++++++...........
T Consensus 65 ~S~~~~~~~~~~~~~~~~l~~ll~~l~---~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~ 139 (290)
T d1mtza_ 65 RSEEPDQSKFTIDYGVEEAEALRSKLF---GNEKVFLMGSSYGGALALAYAVKYQD--HLKGLIVSGGLSSVPLTVKEMN 139 (290)
T ss_dssp TSCCCCGGGCSHHHHHHHHHHHHHHHH---TTCCEEEEEETHHHHHHHHHHHHHGG--GEEEEEEESCCSBHHHHHHHHH
T ss_pred cccccccccccccchhhhhhhhhcccc---cccccceecccccchhhhhhhhcChh--hheeeeecccccCcccchhhhh
Confidence 99765444443 234567777766653 35689999999999999999999998 8999999987654332211111
Q ss_pred hHH------HHHHHHHHHHH----------hHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhh--hccCCCCCHHHH
Q 008093 281 RRL------IQKIYDRALTI----------GLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHAT--CLVGKFETVDTY 342 (578)
Q Consensus 281 ~~~------~~~~~~~~l~~----------~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~--~~~~g~~~~~~y 342 (578)
+.. ........... .......... .........+.+............ .....+.. ...
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 216 (290)
T d1mtza_ 140 RLIDELPAKYRDAIKKYGSSGSYENPEYQEAVNYFYHQHL--LRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTI-TGT 216 (290)
T ss_dssp HHHHTSCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHT--SCSSCCCHHHHHHHHHHHHSSHHHHHTCSBTTBC-CST
T ss_pred hhhhhhhHHHHHHHHHhhhhccccchhHHHHHHHHhhhhh--cccccchHHHHHHHHHHhhhhhhhhhcchhHHhH-hhh
Confidence 000 00000000000 0000000000 000000000000000000000000 00000000 000
Q ss_pred HHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHh
Q 008093 343 YRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 343 y~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
....+....+.++++|+|+++|++|+++|.. . ....+..++.++.+++++||+.++|. | ..+.+.|.+||++
T Consensus 217 ~~~~~~~~~~~~i~~P~l~i~G~~D~~~~~~-~-~~~~~~~~~~~~~~~~~~gH~~~~e~--p--~~~~~~i~~FL~~ 288 (290)
T d1mtza_ 217 IKDWDITDKISAIKIPTLITVGEYDEVTPNV-A-RVIHEKIAGSELHVFRDCSHLTMWED--R--EGYNKLLSDFILK 288 (290)
T ss_dssp TTTCBCTTTGGGCCSCEEEEEETTCSSCHHH-H-HHHHHHSTTCEEEEETTCCSCHHHHS--H--HHHHHHHHHHHHT
T ss_pred hhcccHHHHhhcccceEEEEEeCCCCCCHHH-H-HHHHHHCCCCEEEEECCCCCchHHhC--H--HHHHHHHHHHHHH
Confidence 1112233566788999999999999987632 2 23456678999999999999999983 3 3588999999986
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.92 E-value=1.7e-24 Score=211.08 Aligned_cols=258 Identities=16% Similarity=0.144 Sum_probs=152.5
Q ss_pred EEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCC
Q 008093 124 LFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGV 203 (578)
Q Consensus 124 ~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S 203 (578)
.+++.||..+.+.-. .++|+|||+||+++ +...| ..++..|.++||+|+++|+||||.|
T Consensus 2 ~f~~~dG~~i~y~~~-------------------G~g~pvvllHG~~~-~~~~~-~~~~~~l~~~~~~vi~~D~~G~G~S 60 (273)
T d1a8sa_ 2 TFTTRDGTQIYYKDW-------------------GSGQPIVFSHGWPL-NADSW-ESQMIFLAAQGYRVIAHDRRGHGRS 60 (273)
T ss_dssp EEECTTSCEEEEEEE-------------------SCSSEEEEECCTTC-CGGGG-HHHHHHHHHTTCEEEEECCTTSTTS
T ss_pred EEEeeCCcEEEEEEE-------------------CCCCeEEEECCCCC-CHHHH-HHHHHHHHhCCCEEEEEechhcCcc
Confidence 478899998877532 12356889999965 44456 6888899899999999999999999
Q ss_pred CCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhc-CCCCCccEEEEEcCCcchhhhh----HH
Q 008093 204 SITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEE-GEKTPVAGAAAICSPWDLLIGD----RF 278 (578)
Q Consensus 204 ~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~-p~~~~V~~~Vlis~p~d~~~~~----~~ 278 (578)
+..........+.+|+.++++.+ ...+.+++|||+||.+++.+++.+ |+ +|.+++++++........ ..
T Consensus 61 ~~~~~~~~~~~~~~~~~~~l~~l----~~~~~~lvg~s~gG~~~~~~~a~~~p~--~v~~~~l~~~~~~~~~~~~~~~~~ 134 (273)
T d1a8sa_ 61 SQPWSGNDMDTYADDLAQLIEHL----DLRDAVLFGFSTGGGEVARYIGRHGTA--RVAKAGLISAVPPLMLKTEANPGG 134 (273)
T ss_dssp CCCSSCCSHHHHHHHHHHHHHHT----TCCSEEEEEETHHHHHHHHHHHHHCST--TEEEEEEESCCCSCCBCCSSCTTS
T ss_pred ccccccccccchHHHHHHHHHhc----CccceeeeeeccCCccchhhhhhhhhh--ccceeEEEeccccccccccccccc
Confidence 76533222223445666655543 456789999999998887776654 55 799999998633211100 00
Q ss_pred HhhHHHHHHHHHHHHH---hHHHHHhhhcccccccCCHHHHhccCCHHHH-Hhhhhh-ccCCCC---CHHHHHHhCCccc
Q 008093 279 IGRRLIQKIYDRALTI---GLQDYAQLHEPRYSRLANWEGIKKSRSIRDF-DSHATC-LVGKFE---TVDTYYRNCSSST 350 (578)
Q Consensus 279 l~~~~~~~~~~~~l~~---~l~~~~~~~~~~l~~~~d~~~i~~~~s~~ef-d~~~~~-~~~g~~---~~~~yy~~~s~~~ 350 (578)
........+....... .+....... +..... ......... +..... ...... .....+...+...
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (273)
T d1a8sa_ 135 LPMEVFDGIRQASLADRSQLYKDLASGP---FFGFNQ----PGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSETDFTE 207 (273)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHHHHHTT---SSSTTS----TTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHH
T ss_pred chhhhhhhHHHHHHHHHHHHHHHHhhhh---hhhccc----chhhhhHHHHHHHHHhhcccchhhhhhhHHHhhhhhhhH
Confidence 0000001111100000 011111000 000000 000000110 100000 001111 1112233344556
Q ss_pred ccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHH
Q 008093 351 YVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 351 ~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
.+++|++|+|+|+|++|+++|.+..........++.++.+++++||+.++|. | ..+.+.|.+||+
T Consensus 208 ~~~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~--p--~~~~~~i~~Fl~ 272 (273)
T d1a8sa_ 208 DLKKIDVPTLVVHGDADQVVPIEASGIASAALVKGSTLKIYSGAPHGLTDTH--K--DQLNADLLAFIK 272 (273)
T ss_dssp HHHTCCSCEEEEEETTCSSSCSTTTHHHHHHHSTTCEEEEETTCCSCHHHHT--H--HHHHHHHHHHHH
T ss_pred HHHhhccceEEEecCCCCCCCHHHHHHHHHHhCCCCEEEEECCCCCchHHhC--H--HHHHHHHHHHcC
Confidence 7788999999999999999998866554556678899999999999999983 3 358899999986
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Probab=99.92 E-value=1.3e-23 Score=208.35 Aligned_cols=248 Identities=13% Similarity=0.031 Sum_probs=142.1
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEE
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFA 237 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~l 237 (578)
+++|+|||+||+++++. .|...++..|.++||+|+++|+||||.|+......... ..+|+.+-+..+.+..+..++++
T Consensus 20 ~~~p~vvl~HG~~~~~~-~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~-~~~~~~~d~~~ll~~l~~~~~~l 97 (297)
T d1q0ra_ 20 PADPALLLVMGGNLSAL-GWPDEFARRLADGGLHVIRYDHRDTGRSTTRDFAAHPY-GFGELAADAVAVLDGWGVDRAHV 97 (297)
T ss_dssp TTSCEEEEECCTTCCGG-GSCHHHHHHHHTTTCEEEEECCTTSTTSCCCCTTTSCC-CHHHHHHHHHHHHHHTTCSSEEE
T ss_pred CCCCEEEEECCCCcChh-HHHHHHHHHHHhCCCEEEEEeCCCCccccccccccccc-ccchhhhhhccccccccccceee
Confidence 45688999999965444 44366788899999999999999999997543322111 12333333333334445668999
Q ss_pred EEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHH------------HHHHHHHHHH---------hH
Q 008093 238 IGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLI------------QKIYDRALTI---------GL 296 (578)
Q Consensus 238 vGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~------------~~~~~~~l~~---------~l 296 (578)
+||||||.+++.+|..+|+ +|+++|+++++............... .......... ..
T Consensus 98 vGhS~Gg~~a~~~a~~~P~--~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (297)
T d1q0ra_ 98 VGLSMGATITQVIALDHHD--RLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQPFLDALALMNQPAEGRAAEV 175 (297)
T ss_dssp EEETHHHHHHHHHHHHCGG--GEEEEEEESCCCTTCCHHHHHHHHHHTCCCSSCSCCCCHHHHHHHHHHHSCCCSHHHHH
T ss_pred ccccccchhhhhhhccccc--ceeeeEEEccccccccchhhhHHHhhhhhhhhhhhhhhHHHHHHHHHhccccchhhHHH
Confidence 9999999999999999998 89999999876433221111100000 0000000000 00
Q ss_pred HHHHhhhccccc--ccCCHHHHhccCCHHHHHhhhhhccCCC-CCHHHHHHh----CCcccccCCCccceEEEEeCCCCC
Q 008093 297 QDYAQLHEPRYS--RLANWEGIKKSRSIRDFDSHATCLVGKF-ETVDTYYRN----CSSSTYVGNVSIPLLCISSLDDPV 369 (578)
Q Consensus 297 ~~~~~~~~~~l~--~~~d~~~i~~~~s~~efd~~~~~~~~g~-~~~~~yy~~----~s~~~~l~~I~vPvLiI~g~dDpi 369 (578)
............ ...+... ...+.........++ ......+.. .+....+++|++|+|+|+|++|++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~ 249 (297)
T d1q0ra_ 176 AKRVSKWRILSGTGVPFDDAE------YARWEERAIDHAGGVLAEPYAHYSLTLPPPSRAAELREVTVPTLVIQAEHDPI 249 (297)
T ss_dssp HHHHHHHHHHHCSSSCCCHHH------HHHHHHHHHHHTTTCCSCCCGGGGCCCCCGGGGGGGGGCCSCEEEEEETTCSS
T ss_pred HHHHHHHhhhccccccchHHH------HHHHHHHhhhhccccchhhhhhhhhhhccccchhhhhccCCceEEEEeCCCCC
Confidence 000000000000 0000000 000000000000000 000000000 112346788999999999999999
Q ss_pred CCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHh
Q 008093 370 CTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 370 vp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
+|++.... ..+..++.++.+++++||+.+.|. ++ .+.+.|.+||++
T Consensus 250 ~~~~~~~~-~~~~~p~~~~~~i~~~gH~~~~e~--p~--~~~~~i~~~l~~ 295 (297)
T d1q0ra_ 250 APAPHGKH-LAGLIPTARLAEIPGMGHALPSSV--HG--PLAEVILAHTRS 295 (297)
T ss_dssp SCTTHHHH-HHHTSTTEEEEEETTCCSSCCGGG--HH--HHHHHHHHHHHH
T ss_pred CCHHHHHH-HHHhCCCCEEEEECCCCCcchhhC--HH--HHHHHHHHHHHh
Confidence 99876544 556779999999999999988873 32 478888888875
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=99.91 E-value=5.2e-24 Score=208.16 Aligned_cols=256 Identities=14% Similarity=0.119 Sum_probs=147.9
Q ss_pred EEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCC
Q 008093 125 FRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVS 204 (578)
Q Consensus 125 l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~ 204 (578)
+...+|+.+.+.+... .+.|+|||+||++++ ...| +.++..+.++||+|+++|+||||.|+
T Consensus 5 ~~~~~~~~v~i~y~~~-----------------G~G~~ivllHG~~~~-~~~~-~~~~~~l~~~g~~vi~~D~~G~G~S~ 65 (277)
T d1brta_ 5 VGQENSTSIDLYYEDH-----------------GTGQPVVLIHGFPLS-GHSW-ERQSAALLDAGYRVITYDRRGFGQSS 65 (277)
T ss_dssp EEEETTEEEEEEEEEE-----------------CSSSEEEEECCTTCC-GGGG-HHHHHHHHHTTCEEEEECCTTSTTSC
T ss_pred EecCcCCcEEEEEEEE-----------------ccCCeEEEECCCCCC-HHHH-HHHHHHHHhCCCEEEEEeCCCCCccc
Confidence 4456777776654332 234679999999654 4445 67888898999999999999999997
Q ss_pred CCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHH-HhhcCCCCCccEEEEEcCCcchhhh-----hHH
Q 008093 205 ITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKY-LGEEGEKTPVAGAAAICSPWDLLIG-----DRF 278 (578)
Q Consensus 205 ~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~y-a~~~p~~~~V~~~Vlis~p~d~~~~-----~~~ 278 (578)
..........+.+|+.++++.+ +..+++++||||||.+++.+ +..+|+ +|+++|+++++...... ...
T Consensus 66 ~~~~~~~~~~~~~dl~~~l~~l----~~~~~~lvGhS~G~~~~~~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~ 139 (277)
T d1brta_ 66 QPTTGYDYDTFAADLNTVLETL----DLQDAVLVGFSTGTGEVARYVSSYGTA--RIAKVAFLASLEPFLLKTDDNPDGA 139 (277)
T ss_dssp CCSSCCSHHHHHHHHHHHHHHH----TCCSEEEEEEGGGHHHHHHHHHHHCST--TEEEEEEESCCCSCCBCBTTBTTCS
T ss_pred ccccccchhhhhhhhhhhhhcc----CcccccccccccchhhhhHHHHHhhhc--ccceEEEecCCCcccccchhhhhhh
Confidence 5433222234456776666665 34689999999997665555 555677 89999999864321110 000
Q ss_pred HhhHHHHHHHHHHHHH---hHHHHHhhh---cccccccCCHHHHhccCCHHHHHhhhhh-ccCCCCCHHHHH----HhCC
Q 008093 279 IGRRLIQKIYDRALTI---GLQDYAQLH---EPRYSRLANWEGIKKSRSIRDFDSHATC-LVGKFETVDTYY----RNCS 347 (578)
Q Consensus 279 l~~~~~~~~~~~~l~~---~l~~~~~~~---~~~l~~~~d~~~i~~~~s~~efd~~~~~-~~~g~~~~~~yy----~~~s 347 (578)
................ ......... ...+....... ........ ....+. ..+. ....
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 208 (277)
T d1brta_ 140 APQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEE---------AVRNSWNTAASGGFF--AAAAAPTTWYTD 208 (277)
T ss_dssp BCHHHHHHHHHHHHHCHHHHHHHHHHHHTTHHHHBTTTBCHH---------HHHHHHHHHHHSCHH--HHHHGGGGTTCC
T ss_pred hhhhHHHHHHHhhhccchhhhhhccccccccchhhhhhhhHH---------Hhhhhhcccchhhhh--hhhhhhhhhhhh
Confidence 0000001110000000 000000000 00000000000 00000000 000000 0000 0112
Q ss_pred cccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHh
Q 008093 348 SSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 348 ~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
....+.+|++|+++|+|++|++++.+.......+..++.++.+++++||+.+.|. | ..+.+.|.+||++
T Consensus 209 ~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~--p--~~~~~~i~~fL~k 277 (277)
T d1brta_ 209 FRADIPRIDVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLWTH--A--EEVNTALLAFLAK 277 (277)
T ss_dssp CTTTGGGCCSCEEEEEETTCSSSCGGGTHHHHHHHCTTSEEEEETTCCTTHHHHT--H--HHHHHHHHHHHHC
T ss_pred HHHHHHhcCccceeEeecCCCCcCHHHHHHHHHHhCCCCEEEEECCCCCchHHhC--H--HHHHHHHHHHHCc
Confidence 2346778999999999999999998755444556688999999999999999883 3 3588999999974
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=2.7e-23 Score=208.15 Aligned_cols=269 Identities=11% Similarity=0.099 Sum_probs=159.7
Q ss_pred CeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCC
Q 008093 119 SYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHR 198 (578)
Q Consensus 119 ~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~R 198 (578)
...+.+++++||..|++.-. .++|+|||+||+++ +...| +.++..|+++||+|+++|+|
T Consensus 10 ~~~~~~v~~~~g~~i~y~~~-------------------G~gp~vlllHG~~~-~~~~~-~~~~~~L~~~g~~vi~~D~~ 68 (322)
T d1zd3a2 10 DMSHGYVTVKPRVRLHFVEL-------------------GSGPAVCLCHGFPE-SWYSW-RYQIPALAQAGYRVLAMDMK 68 (322)
T ss_dssp GSEEEEEEEETTEEEEEEEE-------------------CCSSEEEEECCTTC-CGGGG-TTHHHHHHHTTCEEEEEECT
T ss_pred CCceeEEEECCCCEEEEEEE-------------------cCCCeEEEECCCCC-CHHHH-HHHHHHHHHCCCEEEEeccc
Confidence 45777899999988775421 13478999999955 45456 78899999999999999999
Q ss_pred CCCCCCCCCCC-CCC-CCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhh
Q 008093 199 GLGGVSITSDC-FYN-AGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGD 276 (578)
Q Consensus 199 G~G~S~~~~~~-~~~-~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~ 276 (578)
|||.|...... .+. ..+.+|+.++++.+ +..+++++||||||.+++.+|.++|+ ++.++|+++++.......
T Consensus 69 G~G~S~~~~~~~~~~~~~~~~~i~~l~~~l----~~~~~~lvGhS~Gg~va~~~a~~~p~--~v~~lvl~~~~~~~~~~~ 142 (322)
T d1zd3a2 69 GYGESSAPPEIEEYCMEVLCKEMVTFLDKL----GLSQAVFIGHDWGGMLVWYMALFYPE--RVRAVASLNTPFIPANPN 142 (322)
T ss_dssp TSTTSCCCSCGGGGSHHHHHHHHHHHHHHH----TCSCEEEEEETHHHHHHHHHHHHCTT--TEEEEEEESCCCCCCCSS
T ss_pred cccccccccccccccccccchhhhhhhhcc----cccccccccccchHHHHHHHHHhCCc--cccceEEEcccccccccc
Confidence 99998754321 122 12234555555443 45689999999999999999999999 899999998754321100
Q ss_pred -----HHHh--h----------HHHHHHHHHHHHHhHHHHHhhhcccccccCCHH-------------HHhccCCHHHH-
Q 008093 277 -----RFIG--R----------RLIQKIYDRALTIGLQDYAQLHEPRYSRLANWE-------------GIKKSRSIRDF- 325 (578)
Q Consensus 277 -----~~l~--~----------~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~-------------~i~~~~s~~ef- 325 (578)
.... . ..........+...+.................. ......+..+.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (322)
T d1zd3a2 143 MSPLESIKANPVFDYQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQ 222 (322)
T ss_dssp SCHHHHHHTCGGGHHHHHTTSTTHHHHHHHHTHHHHHHHHSCCTTSCCCCTTSHHHHTSSSTTSCSSCCCCTTCCHHHHH
T ss_pred cchhhhhhccchhhhHHhhhccchhhhhhhhhHHHHHHHHhhccchhhhhHHHHhhhhccccccccchhhhhhccHHHHH
Confidence 0000 0 000001111111111111100000000000000 00000000010
Q ss_pred --Hhhhh-----hccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccc
Q 008093 326 --DSHAT-----CLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLA 398 (578)
Q Consensus 326 --d~~~~-----~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~ 398 (578)
...+. .....+......+. ........+|++|+|+|+|++|++++.+.... ..+..++.++.+++++||+.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~-~~~~~~~~~~~~i~~~gH~~ 300 (322)
T d1zd3a2 223 FYVQQFKKSGFRGPLNWYRNMERNWK-WACKSLGRKILIPALMVTAEKDFVLVPQMSQH-MEDWIPHLKRGHIEDCGHWT 300 (322)
T ss_dssp HHHHHHHHHTTHHHHHTTSCHHHHHH-HHHTTTTCCCCSCEEEEEETTCSSSCGGGGTT-GGGTCTTCEEEEETTCCSCH
T ss_pred HHHHHHhhcccccccccccccccccc-cchhhhcccCCCCEEEEEeCCCCCCCHHHHHH-HHHhCCCCEEEEECCCCCch
Confidence 00000 00111222222221 12234567899999999999999999876543 45567899999999999999
Q ss_pred cccccccCcccHHHHHHHHHHh
Q 008093 399 FFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 399 ~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
++|. | ..+.+.|.+||++
T Consensus 301 ~~e~--p--~~v~~~i~~FL~~ 318 (322)
T d1zd3a2 301 QMDK--P--TEVNQILIKWLDS 318 (322)
T ss_dssp HHHS--H--HHHHHHHHHHHHH
T ss_pred HHhC--H--HHHHHHHHHHHhh
Confidence 9883 3 3689999999986
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Probab=99.91 E-value=8.5e-25 Score=213.37 Aligned_cols=261 Identities=14% Similarity=0.108 Sum_probs=149.4
Q ss_pred eeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHH-HHHHHHHHHhCCceEEEEeCC
Q 008093 120 YRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASY-IRHLVFNTAKRGWNVVVSNHR 198 (578)
Q Consensus 120 y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~y-i~~l~~~l~~~Gy~Vvv~D~R 198 (578)
|...+++. ||..+++. .. .+.|+|||+||++++....+ +..++..|. +||+|+++|+|
T Consensus 2 ~~~~~~~~-dg~~l~y~--~~-----------------G~g~~vvllHG~~~~~~~~~~~~~~~~~l~-~~~~v~~~D~~ 60 (268)
T d1j1ia_ 2 YVERFVNA-GGVETRYL--EA-----------------GKGQPVILIHGGGAGAESEGNWRNVIPILA-RHYRVIAMDML 60 (268)
T ss_dssp CEEEEEEE-TTEEEEEE--EE-----------------CCSSEEEEECCCSTTCCHHHHHTTTHHHHT-TTSEEEEECCT
T ss_pred CcCeEEEE-CCEEEEEE--EE-----------------cCCCeEEEECCCCCCccHHHHHHHHHHHHh-cCCEEEEEccc
Confidence 45666665 89887653 11 12356899999976554422 255666664 59999999999
Q ss_pred CCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHH
Q 008093 199 GLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRF 278 (578)
Q Consensus 199 G~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~ 278 (578)
|||.|+..........+.+|+.++++.+ ....+++++||||||.+++.++.++|+ +|+++|+++++.........
T Consensus 61 G~G~S~~~~~~~~~~~~~~~~~~~i~~l---~~~~~~~liG~S~Gg~ia~~~a~~~p~--~v~~lil~~~~~~~~~~~~~ 135 (268)
T d1j1ia_ 61 GFGKTAKPDIEYTQDRRIRHLHDFIKAM---NFDGKVSIVGNSMGGATGLGVSVLHSE--LVNALVLMGSAGLVVEIHED 135 (268)
T ss_dssp TSTTSCCCSSCCCHHHHHHHHHHHHHHS---CCSSCEEEEEEHHHHHHHHHHHHHCGG--GEEEEEEESCCBCCCC----
T ss_pred ccccccCCccccccccccccchhhHHHh---hhcccceeeeccccccccchhhccChH--hhheeeecCCCccccccchh
Confidence 9999976533322233445555555443 234579999999999999999999999 89999999875432221111
Q ss_pred HhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCC-CHHHHHHh---CCcccccCC
Q 008093 279 IGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFE-TVDTYYRN---CSSSTYVGN 354 (578)
Q Consensus 279 l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~-~~~~yy~~---~s~~~~l~~ 354 (578)
.............+......... ... . .... ..........+... . ..+. ....+... ......+.+
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~---~~~-~-~~~~-~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~l~~ 206 (268)
T d1j1ia_ 136 LRPIINYDFTREGMVHLVKALTN---DGF-K-IDDA-MINSRYTYATDEAT-R--KAYVATMQWIREQGGLFYDPEFIRK 206 (268)
T ss_dssp ------CCSCHHHHHHHHHHHSC---TTC-C-CCHH-HHHHHHHHHHSHHH-H--HHHHHHHHHHHHHTSSBCCHHHHTT
T ss_pred hhhhhhhhhhhhhhHHHHHHHhh---hhh-h-hhhh-hhHHHHHhhhhhhh-h--hhhhhhhhhhhccccccchhhhHhh
Confidence 10000000000000000000000 000 0 0000 00000000000000 0 0000 00011111 112245788
Q ss_pred CccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHh
Q 008093 355 VSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 355 I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
+++|+|+|+|++|+++|.+.... ..+..++.++.+++++||+.++|. |+ .+.+.|.+||+.
T Consensus 207 i~~P~l~i~G~~D~~~~~~~~~~-~~~~~~~~~~~~~~~~gH~~~~e~--p~--~~~~~i~~FL~~ 267 (268)
T d1j1ia_ 207 VQVPTLVVQGKDDKVVPVETAYK-FLDLIDDSWGYIIPHCGHWAMIEH--PE--DFANATLSFLSL 267 (268)
T ss_dssp CCSCEEEEEETTCSSSCHHHHHH-HHHHCTTEEEEEESSCCSCHHHHS--HH--HHHHHHHHHHHH
T ss_pred CCCCEEEEEeCCCCCCCHHHHHH-HHHhCCCCEEEEECCCCCchHHhC--HH--HHHHHHHHHHcC
Confidence 99999999999999999875443 556778999999999999999883 33 589999999975
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.91 E-value=5.4e-24 Score=206.69 Aligned_cols=261 Identities=14% Similarity=0.107 Sum_probs=150.4
Q ss_pred EEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCC
Q 008093 124 LFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGV 203 (578)
Q Consensus 124 ~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S 203 (578)
.+...||..+++.-. .+.|+||++||+++ +...| +.+++.|.++||+|+++|+||||.|
T Consensus 2 ~f~~~dG~~l~y~~~-------------------G~g~~vv~lHG~~~-~~~~~-~~~~~~l~~~g~~vi~~D~~G~G~S 60 (271)
T d1va4a_ 2 TFVAKDGTQIYFKDW-------------------GSGKPVLFSHGWLL-DADMW-EYQMEYLSSRGYRTIAFDRRGFGRS 60 (271)
T ss_dssp EEECTTSCEEEEEEE-------------------SSSSEEEEECCTTC-CGGGG-HHHHHHHHTTTCEEEEECCTTSTTS
T ss_pred EEEeECCeEEEEEEE-------------------cCCCeEEEECCCCC-CHHHH-HHHHHHHHhCCCEEEEEeccccccc
Confidence 356789988876432 12356889999965 44445 7888999999999999999999999
Q ss_pred CCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhh-cCCCCCccEEEEEcCCcchhhhhHH----
Q 008093 204 SITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGE-EGEKTPVAGAAAICSPWDLLIGDRF---- 278 (578)
Q Consensus 204 ~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~-~p~~~~V~~~Vlis~p~d~~~~~~~---- 278 (578)
+..........+.+|+.++++.+ +..+++++|||+||.+++.+++. +|+ ++.++++++++.........
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~vg~s~gG~~~~~~~a~~~p~--~v~~~v~~~~~~~~~~~~~~~~~~ 134 (271)
T d1va4a_ 61 DQPWTGNDYDTFADDIAQLIEHL----DLKEVTLVGFSMGGGDVARYIARHGSA--RVAGLVLLGAVTPLFGQKPDYPQG 134 (271)
T ss_dssp CCCSSCCSHHHHHHHHHHHHHHH----TCCSEEEEEETTHHHHHHHHHHHHCST--TEEEEEEESCCCSCCBCBTTBTTS
T ss_pred cccccccccccccccceeeeeec----CCCcceeeccccccccccccccccccc--eeeEEEeecccccccccchhhhhh
Confidence 76533221123334555544444 45689999999999887776554 566 89999999865432211000
Q ss_pred HhhHHHHHHHHHHH---HHhHHHHHhhhcccccccCCHHHHhccCCHHHHHh-hhhhccCCCCCHHHHHHhCCcccccCC
Q 008093 279 IGRRLIQKIYDRAL---TIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDS-HATCLVGKFETVDTYYRNCSSSTYVGN 354 (578)
Q Consensus 279 l~~~~~~~~~~~~l---~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~-~~~~~~~g~~~~~~yy~~~s~~~~l~~ 354 (578)
........+....+ ...+..................... ..... ........+......+........+.+
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 209 (271)
T d1va4a_ 135 VPLDVFARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQ-----TQTLQIALLASLKATVDCVTAFAETDFRPDMAK 209 (271)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGTCCCCHHHH-----HHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHH
T ss_pred hhhhHHHHHHHHhhhhhhhhhhhhcchhhcccchhhhhhhHH-----HHHHhhhhhhhhhhhhhcccccchhhhhhhhhh
Confidence 00000111111100 0001111000000000000000000 00000 000000000011122233344456788
Q ss_pred CccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHh
Q 008093 355 VSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 355 I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
+++|+|+++|++|+++|.+.......+..++.++.+++++||+.++|. |+ .+.+.|.+||++
T Consensus 210 i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~--p~--~~~~~i~~fL~k 271 (271)
T d1va4a_ 210 IDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAVTH--AQ--QLNEDLLAFLKR 271 (271)
T ss_dssp CCSCEEEEEETTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTHHHHT--HH--HHHHHHHHHHTC
T ss_pred cccceeecccCCCCCCCHHHHHHHHHHhCCCCEEEEECCCCCchHHhC--HH--HHHHHHHHHHCc
Confidence 999999999999999998866554555678899999999999999883 33 588999999874
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Probab=99.91 E-value=6.3e-24 Score=208.05 Aligned_cols=243 Identities=16% Similarity=0.194 Sum_probs=137.5
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEE
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIG 239 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG 239 (578)
.|+|||+||+++ +...| ..++..+.++||+|+++|+||||.|+..........+.+|+.++++.+ +..+++++|
T Consensus 23 g~~illlHG~~~-~~~~~-~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~di~~~i~~l----~~~~~~lvG 96 (279)
T d1hkha_ 23 GQPVVLIHGYPL-DGHSW-ERQTRELLAQGYRVITYDRRGFGGSSKVNTGYDYDTFAADLHTVLETL----DLRDVVLVG 96 (279)
T ss_dssp SEEEEEECCTTC-CGGGG-HHHHHHHHHTTEEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHH----TCCSEEEEE
T ss_pred CCeEEEECCCCC-CHHHH-HHHHHHHHHCCCEEEEEechhhCCccccccccchhhhhhhhhhhhhhc----CcCcccccc
Confidence 477999999965 44455 678888888999999999999999976533221233456777766655 345899999
Q ss_pred EchHHHHHHHH-HhhcCCCCCccEEEEEcCCcchhhhh----HHHhhHHHHHHHH-------HHHHHhHHHHHhhhcccc
Q 008093 240 TSIGANILVKY-LGEEGEKTPVAGAAAICSPWDLLIGD----RFIGRRLIQKIYD-------RALTIGLQDYAQLHEPRY 307 (578)
Q Consensus 240 hSmGG~ial~y-a~~~p~~~~V~~~Vlis~p~d~~~~~----~~l~~~~~~~~~~-------~~l~~~l~~~~~~~~~~l 307 (578)
|||||.+++.+ +..+|+ +|.++++++++....... ..+.......+.. ..+....+...... ...
T Consensus 97 hS~Gg~~~a~~~a~~~p~--~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 173 (279)
T d1hkha_ 97 FSMGTGELARYVARYGHE--RVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWFTDFYKNFYNLD-ENL 173 (279)
T ss_dssp ETHHHHHHHHHHHHHCST--TEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHTHH-HHB
T ss_pred ccccccchhhhhcccccc--ccceeEEeeccCCccccchhhhhhhhHHHHHHHHHhhhhhhhhhhhhhhhhhcccc-hhh
Confidence 99997655555 445577 899999998753221110 0000000000000 00000111110000 000
Q ss_pred cccCCHHHHhccCCHHHHHhhhhh-ccCCCCCHHHHHHhC-CcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCC
Q 008093 308 SRLANWEGIKKSRSIRDFDSHATC-LVGKFETVDTYYRNC-SSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKN 385 (578)
Q Consensus 308 ~~~~d~~~i~~~~s~~efd~~~~~-~~~g~~~~~~yy~~~-s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~ 385 (578)
........+. ..+...... ....+.....+.... .....+.++++|+|+++|++|++++.+.......+..++
T Consensus 174 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~p~ 248 (279)
T d1hkha_ 174 GSRISEQAVT-----GSWNVAIGSAPVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQAVPE 248 (279)
T ss_dssp TTTBCHHHHH-----HHHHHHHTSCTTHHHHTHHHHTCBCHHHHHHHHHHCCCEEEEEETTCSSSCTTTTHHHHHHHCTT
T ss_pred hhhhhhhhhh-----hhhhhhcccchhhhhhhhhhhhcccccchhhhcccCCceEEEEcCCCCccCHHHHHHHHHHhCCC
Confidence 0000000000 000000000 000000111110000 011345667899999999999999977554445666789
Q ss_pred EEEEEeCCCCccccccccccCcccHHHHHHHHHHh
Q 008093 386 VVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 386 ~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
.++.+++++||+.++|. | ..+.+.|.+||++
T Consensus 249 ~~~~~i~~~gH~~~~e~--p--~~v~~~i~~fl~k 279 (279)
T d1hkha_ 249 ADYVEVEGAPHGLLWTH--A--DEVNAALKTFLAK 279 (279)
T ss_dssp SEEEEETTCCTTHHHHT--H--HHHHHHHHHHHHC
T ss_pred CEEEEECCCCCchHHhC--H--HHHHHHHHHHHCc
Confidence 99999999999999983 3 3588999999974
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.90 E-value=8.9e-25 Score=215.56 Aligned_cols=271 Identities=10% Similarity=0.061 Sum_probs=153.5
Q ss_pred CCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeC
Q 008093 118 FSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 197 (578)
Q Consensus 118 ~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~ 197 (578)
.+++.++++. ||..+++.-..+ .++|+||++||++++ ...| +.+++.|. .||+|+++|+
T Consensus 5 ~p~~~~~i~~-~g~~i~y~~~G~-----------------~~~p~lvllHG~~~~-~~~~-~~~~~~L~-~~~~vi~~d~ 63 (291)
T d1bn7a_ 5 FPFDPHYVEV-LGERMHYVDVGP-----------------RDGTPVLFLHGNPTS-SYLW-RNIIPHVA-PSHRCIAPDL 63 (291)
T ss_dssp CCCCCEEEEE-TTEEEEEEEESC-----------------SSSSCEEEECCTTCC-GGGG-TTTHHHHT-TTSCEEEECC
T ss_pred CCCCCeEEEE-CCEEEEEEEeCC-----------------CCCCeEEEECCCCCC-HHHH-HHHHHHHh-cCCEEEEEeC
Confidence 4567777776 788887654332 345779999999654 4455 67788875 4999999999
Q ss_pred CCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhH
Q 008093 198 RGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDR 277 (578)
Q Consensus 198 RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~ 277 (578)
||||.|+..........+.+|+.++++ +.+..+++++||||||.+++.++..+|+ .++++++++++........
T Consensus 64 ~G~G~S~~~~~~~~~~~~~~~l~~~l~----~l~~~~~~lvGhS~Gg~ia~~~a~~~p~--~~~~li~~~~~~~~~~~~~ 137 (291)
T d1bn7a_ 64 IGMGKSDKPDLDYFFDDHVRYLDAFIE----ALGLEEVVLVIHDWGSALGFHWAKRNPE--RVKGIACMEFIRPIPTWDE 137 (291)
T ss_dssp TTSTTSCCCSCCCCHHHHHHHHHHHHH----HTTCCSEEEEEEHHHHHHHHHHHHHCGG--GEEEEEEEEECCCBCSGGG
T ss_pred CCCccccccccccchhHHHHHHhhhhh----hhccccccccccccccchhHHHHHhCCc--ceeeeeeeccccCCccchh
Confidence 999999754332222233345544444 4456789999999999999999999998 8999998875432221111
Q ss_pred H--HhhHHHHHH----HHHHHHHhHHHHHhhhccc-ccccCCHHHH---hc-c---CCHHHHHhhhhhccCCCCCHHHHH
Q 008093 278 F--IGRRLIQKI----YDRALTIGLQDYAQLHEPR-YSRLANWEGI---KK-S---RSIRDFDSHATCLVGKFETVDTYY 343 (578)
Q Consensus 278 ~--l~~~~~~~~----~~~~l~~~l~~~~~~~~~~-l~~~~d~~~i---~~-~---~s~~efd~~~~~~~~g~~~~~~yy 343 (578)
. ........+ .................+. .......... .. . .....+... ..............
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 216 (291)
T d1bn7a_ 138 WPEFARETFQAFRTADVGRELIIDQNAFIEGVLPKCVVRPLTEVEMDHYREPFLKPVDREPLWRF-PNEIPIAGEPANIV 216 (291)
T ss_dssp SCHHHHHHHHHHTSTTHHHHHHTTSCHHHHTHHHHTCSSCCCHHHHHHHHGGGSSGGGGHHHHHH-HHHSCBTTBSHHHH
T ss_pred hhhhhhhHHHHHhhhhhHHHhhhhhhhhHHhhhhhhccccchHHHHHHHHHHhcchhhhHHHHHH-HHHhhhhhhhchhh
Confidence 0 000000000 0000000000000000000 0000000000 00 0 000000000 00001111111100
Q ss_pred H-hCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 344 R-NCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 344 ~-~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
. .......+.++++|+|+++|++|+++|.+.... ..+..++.++++++++||+.+.|. | ..+.+.|.+||+.+
T Consensus 217 ~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~-~~~~~~~~~~~~i~~~gH~~~~e~--p--~~v~~~i~~fL~~l 290 (291)
T d1bn7a_ 217 ALVEAYMNWLHQSPVPKLLFWGTPGVLIPPAEAAR-LAESLPNCKTVDIGPGLHYLQEDN--P--DLIGSEIARWLPGL 290 (291)
T ss_dssp HHHHHHHHHHHHCCSCEEEEEEEECSSSCHHHHHH-HHHHSTTEEEEEEEEESSCGGGTC--H--HHHHHHHHHHSGGG
T ss_pred hhhhhhhhhhhcCCCCEEEEEeCCCCCcCHHHHHH-HHHHCCCCEEEEECCCCCchHHhC--H--HHHHHHHHHHHHhh
Confidence 0 001123457789999999999999999876543 456678999999999999998883 3 35889999999864
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.90 E-value=1.6e-23 Score=204.46 Aligned_cols=243 Identities=12% Similarity=0.027 Sum_probs=145.1
Q ss_pred CcEEEEECCCCCCCccHH-HHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEE
Q 008093 160 TPIAIVIPGLTSDSAASY-IRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAI 238 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~y-i~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lv 238 (578)
+|+|||+||++++..... +..++..|. .||+|+++|+||||.|....... ...++..+.+..+.+..+..+++++
T Consensus 23 G~pvvllHG~~~~~~~~~~~~~~~~~l~-~~~~vi~~Dl~G~G~S~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~lv 98 (271)
T d1uk8a_ 23 GQPVILIHGSGPGVSAYANWRLTIPALS-KFYRVIAPDMVGFGFTDRPENYN---YSKDSWVDHIIGIMDALEIEKAHIV 98 (271)
T ss_dssp SSEEEEECCCSTTCCHHHHHTTTHHHHT-TTSEEEEECCTTSTTSCCCTTCC---CCHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred CCeEEEECCCCCCccHHHHHHHHHHHHh-CCCEEEEEeCCCCCCcccccccc---ccccccchhhhhhhhhhcCCCceEe
Confidence 467889999976554422 244566664 59999999999999997543322 2345666666666666677799999
Q ss_pred EEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHH-HHHHHHHHHHhHHHHHhhhcccccccCCHHHH-
Q 008093 239 GTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLI-QKIYDRALTIGLQDYAQLHEPRYSRLANWEGI- 316 (578)
Q Consensus 239 GhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~-~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i- 316 (578)
||||||.+++.++.++|+ .+.++|+++++.........+..... ..... .+.......... .........
T Consensus 99 G~S~Gg~ia~~~a~~~p~--~~~~lil~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~-~~~~~~~~~~ 170 (271)
T d1uk8a_ 99 GNAFGGGLAIATALRYSE--RVDRMVLMGAAGTRFDVTEGLNAVWGYTPSIE-----NMRNLLDIFAYD-RSLVTDELAR 170 (271)
T ss_dssp EETHHHHHHHHHHHHCGG--GEEEEEEESCCCSCCCCCHHHHHHHTCCSCHH-----HHHHHHHHHCSC-GGGCCHHHHH
T ss_pred eccccceeehHHHHhhhc--cchheeecccCCCcccchhhhhhhhhccchhH-----HHHHHHHHHhhh-cccchhHHHH
Confidence 999999999999999998 89999998876433221111110000 00000 000000000000 000000000
Q ss_pred --hccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCC
Q 008093 317 --KKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHG 394 (578)
Q Consensus 317 --~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~G 394 (578)
........+.+.+... ........+.........+.++++|+|+|+|++|+++|.+.... ..+..++.++.+++++
T Consensus 171 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~-~~~~~~~~~~~~~~~~ 248 (271)
T d1uk8a_ 171 LRYEASIQPGFQESFSSM-FPEPRQRWIDALASSDEDIKTLPNETLIIHGREDQVVPLSSSLR-LGELIDRAQLHVFGRC 248 (271)
T ss_dssp HHHHHHTSTTHHHHHHTT-SCSSTHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCHHHHHH-HHHHCTTEEEEEESSC
T ss_pred HHHhhhhchhHHHHHHhh-cchhhhhhhhhccccHHHHHhhccceeEEecCCCCCcCHHHHHH-HHHhCCCCEEEEECCC
Confidence 0000000011111110 00111111222233446688999999999999999999875443 5566789999999999
Q ss_pred CccccccccccCcccHHHHHHHHHHh
Q 008093 395 GHLAFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 395 GH~~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
||+.++|. |+ .+.+.|.+||++
T Consensus 249 gH~~~~e~--p~--~~~~~i~~Fl~e 270 (271)
T d1uk8a_ 249 GHWTQIEQ--TD--RFNRLVVEFFNE 270 (271)
T ss_dssp CSCHHHHT--HH--HHHHHHHHHHHT
T ss_pred CCchHHHC--HH--HHHHHHHHHHhc
Confidence 99999983 33 589999999985
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=3.2e-24 Score=205.69 Aligned_cols=198 Identities=15% Similarity=0.215 Sum_probs=145.0
Q ss_pred eEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHH--HHHHHHhCCceEEEEeCC
Q 008093 121 RRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRH--LVFNTAKRGWNVVVSNHR 198 (578)
Q Consensus 121 ~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~--l~~~l~~~Gy~Vvv~D~R 198 (578)
+...+. -||..+.+....+.. ++.+|+|||+||+++ +...| +. .+..|+++||+|+++|+|
T Consensus 7 ~e~~i~-v~G~~i~y~~~~~~~--------------~~~~~~vvllHG~~~-~~~~w-~~~~~~~~la~~gy~via~D~~ 69 (208)
T d1imja_ 7 REGTIQ-VQGQALFFREALPGS--------------GQARFSVLLLHGIRF-SSETW-QNLGTLHRLAQAGYRAVAIDLP 69 (208)
T ss_dssp CCCCEE-ETTEEECEEEEECSS--------------SCCSCEEEECCCTTC-CHHHH-HHHTHHHHHHHTTCEEEEECCT
T ss_pred eEEEEE-ECCEEEEEEEecCCC--------------CCCCCeEEEECCCCC-ChhHH-hhhHHHHHHHHcCCeEEEeecc
Confidence 334454 489889887665532 356788999999965 44444 33 468899999999999999
Q ss_pred CCCCCCCCCCC-CCC-CCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhh
Q 008093 199 GLGGVSITSDC-FYN-AGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGD 276 (578)
Q Consensus 199 G~G~S~~~~~~-~~~-~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~ 276 (578)
|||.|+..... .+. ....+++.++++.+ +..+++++||||||.+++.++.++|+ +++++|++++.....
T Consensus 70 G~G~S~~~~~~~~~~~~~~~~~l~~~~~~l----~~~~~~lvG~S~Gg~~a~~~a~~~p~--~v~~lV~~~p~~~~~--- 140 (208)
T d1imja_ 70 GLGHSKEAAAPAPIGELAPGSFLAAVVDAL----ELGPPVVISPSLSGMYSLPFLTAPGS--QLPGFVPVAPICTDK--- 140 (208)
T ss_dssp TSGGGTTSCCSSCTTSCCCTHHHHHHHHHH----TCCSCEEEEEGGGHHHHHHHHTSTTC--CCSEEEEESCSCGGG---
T ss_pred cccCCCCCCcccccchhhhhhhhhhccccc----ccccccccccCcHHHHHHHHHHHhhh--hcceeeecCcccccc---
Confidence 99999765322 222 23345666666654 34588999999999999999999998 899999987642100
Q ss_pred HHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCc
Q 008093 277 RFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVS 356 (578)
Q Consensus 277 ~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~ 356 (578)
. ....+.+++
T Consensus 141 ----------------------------------~------------------------------------~~~~~~~i~ 150 (208)
T d1imja_ 141 ----------------------------------I------------------------------------NAANYASVK 150 (208)
T ss_dssp ----------------------------------S------------------------------------CHHHHHTCC
T ss_pred ----------------------------------c------------------------------------ccccccccc
Confidence 0 001234678
Q ss_pred cceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 357 IPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 357 vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
+|+|+|+|++|+++|.+. ......++.++.+++++||..+++. |+ .+.+.+.+||+.+
T Consensus 151 ~P~Lii~G~~D~~~~~~~---~~~~~~~~~~~~~i~~~gH~~~~~~--p~--~~~~~l~~Fl~~L 208 (208)
T d1imja_ 151 TPALIVYGDQDPMGQTSF---EHLKQLPNHRVLIMKGAGHPCYLDK--PE--EWHTGLLDFLQGL 208 (208)
T ss_dssp SCEEEEEETTCHHHHHHH---HHHTTSSSEEEEEETTCCTTHHHHC--HH--HHHHHHHHHHHTC
T ss_pred cccccccCCcCcCCcHHH---HHHHhCCCCeEEEECCCCCchhhhC--HH--HHHHHHHHHHhcC
Confidence 999999999999987542 2345678999999999999998883 43 4899999999864
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Probab=99.90 E-value=1.1e-23 Score=213.36 Aligned_cols=234 Identities=14% Similarity=0.113 Sum_probs=145.2
Q ss_pred eEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCC
Q 008093 121 RRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGL 200 (578)
Q Consensus 121 ~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~ 200 (578)
..+.+++.||..+.++++.|.. ..+..+++||++||++++ ...| ..+++.|+++||+|+++|+|||
T Consensus 5 ~~h~~~~~dg~~l~~w~~~p~~------------~~~~~~~~Vvi~HG~~~~-~~~~-~~~a~~L~~~G~~Vi~~D~rGh 70 (302)
T d1thta_ 5 IAHVLRVNNGQELHVWETPPKE------------NVPFKNNTILIASGFARR-MDHF-AGLAEYLSTNGFHVFRYDSLHH 70 (302)
T ss_dssp EEEEEEETTTEEEEEEEECCCT------------TSCCCSCEEEEECTTCGG-GGGG-HHHHHHHHTTTCCEEEECCCBC
T ss_pred eeeEEEcCCCCEEEEEEecCcC------------CCCCCCCEEEEeCCCcch-HHHH-HHHHHHHHHCCCEEEEecCCCC
Confidence 6788999999999988776643 123567899999999654 4445 7899999999999999999998
Q ss_pred -CCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHH
Q 008093 201 -GGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFI 279 (578)
Q Consensus 201 -G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l 279 (578)
|.|++.........+.+|+.+++++++... ..+++++||||||.+++.+|.+. +++++|+.++..+.....
T Consensus 71 ~G~S~g~~~~~~~~~~~~dl~~vi~~l~~~~-~~~i~lvG~SmGG~ial~~A~~~----~v~~li~~~g~~~~~~~~--- 142 (302)
T d1thta_ 71 VGLSSGSIDEFTMTTGKNSLCTVYHWLQTKG-TQNIGLIAASLSARVAYEVISDL----ELSFLITAVGVVNLRDTL--- 142 (302)
T ss_dssp C--------CCCHHHHHHHHHHHHHHHHHTT-CCCEEEEEETHHHHHHHHHTTTS----CCSEEEEESCCSCHHHHH---
T ss_pred CCCCCCcccCCCHHHHHHHHHHHHHhhhccC-CceeEEEEEchHHHHHHHHhccc----ccceeEeecccccHHHHH---
Confidence 777654333222356789999999998764 45899999999999999887642 588999988776543211
Q ss_pred hhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccce
Q 008093 280 GRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPL 359 (578)
Q Consensus 280 ~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPv 359 (578)
...+...... .............. .......|.... .......... ....+.+|++|+
T Consensus 143 ---------~~~~~~~~~~---~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~------~~~~~~~i~~Pv 200 (302)
T d1thta_ 143 ---------EKALGFDYLS---LPIDELPNDLDFEG--HKLGSEVFVRDC--FEHHWDTLDS------TLDKVANTSVPL 200 (302)
T ss_dssp ---------HHHHSSCGGG---SCGGGCCSEEEETT--EEEEHHHHHHHH--HHTTCSSHHH------HHHHHTTCCSCE
T ss_pred ---------HHHHhhccch---hhhhhccccccccc--cchhhHHHHHHH--HHhHHHHHHH------HHHHHhhcCCCE
Confidence 1100000000 00000000000000 000000111000 0011111111 234678999999
Q ss_pred EEEEeCCCCCCCCCCcchHHH-hcCCCEEEEEeCCCCccc
Q 008093 360 LCISSLDDPVCTVEAIPWDEC-RANKNVVLATTWHGGHLA 398 (578)
Q Consensus 360 LiI~g~dDpivp~~~~~~~~~-~~~~~~~l~~~~~GGH~~ 398 (578)
|+++|++|.+||.+....... ..+++.++.+++++||..
T Consensus 201 Lii~G~~D~~V~~~~~~~l~~~i~s~~~kl~~~~g~~H~l 240 (302)
T d1thta_ 201 IAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSHDL 240 (302)
T ss_dssp EEEEETTCTTSCHHHHHHHHTTCTTCCEEEEEETTCCSCT
T ss_pred EEEEeCCCCccCHHHHHHHHHhCCCCCceEEEecCCCccc
Confidence 999999999999875544332 245689999999999964
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Probab=99.90 E-value=2.3e-24 Score=212.68 Aligned_cols=246 Identities=15% Similarity=0.174 Sum_probs=139.8
Q ss_pred CCCcEEEEECCCCCCCccH-HHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCC-CCchHH-HHHHHHHHHHHCCCCc
Q 008093 158 DTTPIAIVIPGLTSDSAAS-YIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN-AGWTED-AREVIGYLHHEYPKAP 234 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~-yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~-~~~~~D-l~~~i~~l~~~~~~~~ 234 (578)
+++|+|||+||++++.... .++.++..|++ ||+|+++|+||||.|+........ ....++ +.++++.+. ..+..+
T Consensus 24 ~~~p~ivllHG~~~~~~~~~~~~~~~~~L~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~i~-~~~~~~ 101 (281)
T d1c4xa_ 24 PQSPAVVLLHGAGPGAHAASNWRPIIPDLAE-NFFVVAPDLIGFGQSEYPETYPGHIMSWVGMRVEQILGLMN-HFGIEK 101 (281)
T ss_dssp TTSCEEEEECCCSTTCCHHHHHGGGHHHHHT-TSEEEEECCTTSTTSCCCSSCCSSHHHHHHHHHHHHHHHHH-HHTCSS
T ss_pred CCCCEEEEECCCCCCCcHHHHHHHHHHHHhC-CCEEEEEeCCCCccccccccccccchhhHHHhhhhcccccc-cccccc
Confidence 5678999999996655432 22567777764 899999999999999765432221 111222 223333333 334568
Q ss_pred EEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhh-hHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCH
Q 008093 235 LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIG-DRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANW 313 (578)
Q Consensus 235 i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~-~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~ 313 (578)
++++||||||.+++.+|.++|+ +|+++|++++....... ...+.+.. ........ .............-......
T Consensus 102 ~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvli~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 177 (281)
T d1c4xa_ 102 SHIVGNSMGGAVTLQLVVEAPE--RFDKVALMGSVGAPMNARPPELARLL-AFYADPRL-TPYRELIHSFVYDPENFPGM 177 (281)
T ss_dssp EEEEEETHHHHHHHHHHHHCGG--GEEEEEEESCCSSCCSSCCHHHHHHH-TGGGSCCH-HHHHHHHHTTSSCSTTCTTH
T ss_pred ceeccccccccccccccccccc--cccceEEeccccCccccchhHHHHHH-Hhhhhccc-chhhhhhhhhcccccccchh
Confidence 9999999999999999999998 89999999874322111 11110000 00000000 00000000000000000000
Q ss_pred HHH-------hccCCHHHHHhhhh-hccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCC
Q 008093 314 EGI-------KKSRSIRDFDSHAT-CLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKN 385 (578)
Q Consensus 314 ~~i-------~~~~s~~efd~~~~-~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~ 385 (578)
... ........+..... .....+. ........+.+|++|+|+|+|++|+++|.+.... ..+..++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~-~~~~~~~ 250 (281)
T d1c4xa_ 178 EEIVKSRFEVANDPEVRRIQEVMFESMKAGME------SLVIPPATLGRLPHDVLVFHGRQDRIVPLDTSLY-LTKHLKH 250 (281)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCG------GGCCCHHHHTTCCSCEEEEEETTCSSSCTHHHHH-HHHHCSS
T ss_pred hhHHHHHhhhcccchhhhhhhhhhhHHhhhhh------hhccchhhhhhhccceEEEEeCCCCCcCHHHHHH-HHHHCCC
Confidence 000 00000000110000 0000110 1122234578899999999999999999875543 4566789
Q ss_pred EEEEEeCCCCccccccccccCcccHHHHHHHHHHh
Q 008093 386 VVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 386 ~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
.++.+++++||+.++|. | ..+.+.+.+||++
T Consensus 251 ~~~~~i~~~gH~~~~e~--p--~~~~~~i~~Fl~s 281 (281)
T d1c4xa_ 251 AELVVLDRCGHWAQLER--W--DAMGPMLMEHFRA 281 (281)
T ss_dssp EEEEEESSCCSCHHHHS--H--HHHHHHHHHHHHC
T ss_pred CEEEEECCCCCchHHhC--H--HHHHHHHHHHhCC
Confidence 99999999999999983 3 3589999999974
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Probab=99.90 E-value=1.2e-23 Score=204.64 Aligned_cols=239 Identities=11% Similarity=0.032 Sum_probs=141.2
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEE
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAI 238 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lv 238 (578)
..|+||++||+++ +...| +.+++.|. .||+|+++|+||||.|+.... ....|+ ++.+... ...+++++
T Consensus 10 g~~~lvllHG~~~-~~~~~-~~~~~~L~-~~~~vi~~D~~G~G~S~~~~~-----~~~~d~---~~~~~~~-~~~~~~l~ 77 (256)
T d1m33a_ 10 GNVHLVLLHGWGL-NAEVW-RCIDEELS-SHFTLHLVDLPGFGRSRGFGA-----LSLADM---AEAVLQQ-APDKAIWL 77 (256)
T ss_dssp CSSEEEEECCTTC-CGGGG-GGTHHHHH-TTSEEEEECCTTSTTCCSCCC-----CCHHHH---HHHHHTT-SCSSEEEE
T ss_pred CCCeEEEECCCCC-CHHHH-HHHHHHHh-CCCEEEEEeCCCCCCcccccc-----cccccc---ccccccc-cccceeee
Confidence 4467889999965 44445 67888886 589999999999999864422 122343 3333332 35689999
Q ss_pred EEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhh--hHHHhhHHHHHHHHHHHHHhHHHHHhhhccc-ccccCCHHH
Q 008093 239 GTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIG--DRFIGRRLIQKIYDRALTIGLQDYAQLHEPR-YSRLANWEG 315 (578)
Q Consensus 239 GhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~--~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~-l~~~~d~~~ 315 (578)
||||||.+++.+|.++|+ .+++++++++....... ...+.......+ ...+.............. .........
T Consensus 78 GhS~Gg~ia~~~a~~~p~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (256)
T d1m33a_ 78 GWSLGGLVASQIALTHPE--RVRALVTVASSPCFSARDEWPGIKPDVLAGF-QQQLSDDQQRTVERFLALQTMGTETARQ 154 (256)
T ss_dssp EETHHHHHHHHHHHHCGG--GEEEEEEESCCSCCBCBTTBCSBCHHHHHHH-HHHHHHHHHHHHHHHHHTTSTTSTTHHH
T ss_pred ecccchHHHHHHHHhCCc--ccceeeeeecccccccchhhhhhHHHHHHHH-HhhhhhhhHHHHHHHhhhhhccccchhh
Confidence 999999999999999998 78999888753221111 000111111111 111111111111100000 000000000
Q ss_pred HhccCCHHHHHhhhhhc-cC---CCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEe
Q 008093 316 IKKSRSIRDFDSHATCL-VG---KFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATT 391 (578)
Q Consensus 316 i~~~~s~~efd~~~~~~-~~---g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~ 391 (578)
....+....... .. .+......+...+....+++|++|+|+|+|++|+++|.+.... ..+..++.++.++
T Consensus 155 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~p~~~~~~-l~~~~~~~~~~~i 228 (256)
T d1m33a_ 155 -----DARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPM-LDKLWPHSESYIF 228 (256)
T ss_dssp -----HHHHHHHHHHTSCCCCHHHHHHHHHHHHHCCCTTGGGGCCSCEEEEEETTCSSSCGGGCC--CTTTCTTCEEEEE
T ss_pred -----HHHHHHHhhhhcchhhHHHHHhhhhhhcccchHHHHHhccCCccccccccCCCCCHHHHHH-HHHHCCCCEEEEE
Confidence 000011110000 00 0111223334445567788999999999999999999876554 4456788999999
Q ss_pred CCCCccccccccccCcccHHHHHHHHHHhhc
Q 008093 392 WHGGHLAFFEGLTAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 392 ~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~ 422 (578)
+++||+.++|. +..+.+.|.+|++++.
T Consensus 229 ~~~gH~~~~e~----p~~~~~~l~~fl~~ig 255 (256)
T d1m33a_ 229 AKAAHAPFISH----PAEFCHLLVALKQRVG 255 (256)
T ss_dssp TTCCSCHHHHS----HHHHHHHHHHHHTTSC
T ss_pred CCCCCchHHHC----HHHHHHHHHHHHHHcC
Confidence 99999999983 3469999999998763
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Probab=99.90 E-value=1.7e-23 Score=206.16 Aligned_cols=266 Identities=13% Similarity=0.090 Sum_probs=151.5
Q ss_pred CCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeC
Q 008093 118 FSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 197 (578)
Q Consensus 118 ~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~ 197 (578)
..|+...++.+ |..+++.-. .++|+|||+||+++ +...| ..++..|.+ ||+|+++|+
T Consensus 6 ~~~~~~~~~~~-~~~l~y~~~-------------------G~gp~vv~lHG~~~-~~~~~-~~~~~~l~~-~~~vi~~D~ 62 (293)
T d1ehya_ 6 EDFKHYEVQLP-DVKIHYVRE-------------------GAGPTLLLLHGWPG-FWWEW-SKVIGPLAE-HYDVIVPDL 62 (293)
T ss_dssp GGSCEEEEECS-SCEEEEEEE-------------------ECSSEEEEECCSSC-CGGGG-HHHHHHHHT-TSEEEEECC
T ss_pred CCCcceEEEEC-CEEEEEEEE-------------------CCCCeEEEECCCCC-CHHHH-HHHHHHHhc-CCEEEEecC
Confidence 45676777775 556765321 13578999999965 44455 678888865 899999999
Q ss_pred CCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhh--
Q 008093 198 RGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIG-- 275 (578)
Q Consensus 198 RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~-- 275 (578)
||||.|.............+++.+.+..+.+..+..+++++||||||.+++.++.++|+ ++.++|+++++......
T Consensus 63 ~G~G~s~~~~~~~~~~~~~~~~a~~~~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~ 140 (293)
T d1ehya_ 63 RGFGDSEKPDLNDLSKYSLDKAADDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSD--RVIKAAIFDPIQPDFGPVY 140 (293)
T ss_dssp TTSTTSCCCCTTCGGGGCHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHTGG--GEEEEEEECCSCTTC----
T ss_pred CcccCCccccccccccccchhhhhHHHhhhhhcCccccccccccccccchhcccccCcc--ccceeeeeeccCccccchh
Confidence 99999876544333323334555555555556677799999999999999999999998 89999999875321110
Q ss_pred --hHHHhhHHHHHHH-----HHHH---HHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccC--CCCCHHHHH
Q 008093 276 --DRFIGRRLIQKIY-----DRAL---TIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVG--KFETVDTYY 343 (578)
Q Consensus 276 --~~~l~~~~~~~~~-----~~~l---~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~--g~~~~~~yy 343 (578)
............. .... ......+............ .......+......... .......+|
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (293)
T d1ehya_ 141 FGLGHVHESWYSQFHQLDMAVEVVGSSREVCKKYFKHFFDHWSYRD------ELLTEEELEVHVDNCMKPDNIHGGFNYY 214 (293)
T ss_dssp -------CCHHHHHTTCHHHHHHHTSCHHHHHHHHHHHHHHTSSSS------CCSCHHHHHHHHHHHTSTTHHHHHHHHH
T ss_pred hhhhhhhhhhhhhhhccchhhhhhccchhHHHHHHHHhhhhccccc------ccccHHHHHhhhhccccchhhhhhhhhh
Confidence 0000000000000 0000 0000011100000000000 00000111111000000 000111222
Q ss_pred HhC-Cc------ccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHH
Q 008093 344 RNC-SS------STYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNE 416 (578)
Q Consensus 344 ~~~-s~------~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~e 416 (578)
+.. .. ......+++|+|+|+|++|+++|.+.......+..++.++.+++++||+.++|. | ..+.+.|.+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~--P--e~~~~~I~~ 290 (293)
T d1ehya_ 215 RANIRPDAALWTDLDHTMSDLPVTMIWGLGDTCVPYAPLIEFVPKYYSNYTMETIEDCGHFLMVEK--P--EIAIDRIKT 290 (293)
T ss_dssp HHHSSSSCCCCCTGGGSCBCSCEEEEEECCSSCCTTHHHHHHHHHHBSSEEEEEETTCCSCHHHHC--H--HHHHHHHHH
T ss_pred hhccccchhhhhhhhhhccCCceEEEEeCCCCCcCHHHHHHHHHHhCCCCEEEEECCCCCchHHHC--H--HHHHHHHHH
Confidence 211 00 112356789999999999999998755444556678999999999999999983 3 357777877
Q ss_pred HH
Q 008093 417 YL 418 (578)
Q Consensus 417 FL 418 (578)
||
T Consensus 291 Ff 292 (293)
T d1ehya_ 291 AF 292 (293)
T ss_dssp HC
T ss_pred hh
Confidence 75
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.89 E-value=1.3e-22 Score=191.58 Aligned_cols=228 Identities=12% Similarity=0.120 Sum_probs=139.5
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEE
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAI 238 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lv 238 (578)
+++.|||+||++|++ ..| +.+++.|+++||+|+++|+||||.|...........+.+|+..++..+... ...+++++
T Consensus 10 ~~~~vvliHG~~~~~-~~~-~~l~~~L~~~G~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~ 86 (242)
T d1tqha_ 10 GERAVLLLHGFTGNS-ADV-RMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQDVMNGYEFLKNK-GYEKIAVA 86 (242)
T ss_dssp SSCEEEEECCTTCCT-HHH-HHHHHHHHHTTCEEEECCCTTSSSCHHHHTTCCHHHHHHHHHHHHHHHHHH-TCCCEEEE
T ss_pred CCCeEEEECCCCCCH-HHH-HHHHHHHHHCCCEEEEEeCCCCccccccccccchhHHHHHHHHHHhhhhhc-ccCceEEE
Confidence 345688999996544 445 789999999999999999999998864322222223345566666655544 45689999
Q ss_pred EEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhc
Q 008093 239 GTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKK 318 (578)
Q Consensus 239 GhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~ 318 (578)
||||||.+++.++.+++. ...++++++............. ...... ......
T Consensus 87 G~S~Gg~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--------~~~~~~-------------- 138 (242)
T d1tqha_ 87 GLSLGGVFSLKLGYTVPI----EGIVTMCAPMYIKSEETMYEGV--LEYARE--------YKKREG-------------- 138 (242)
T ss_dssp EETHHHHHHHHHHTTSCC----SCEEEESCCSSCCCHHHHHHHH--HHHHHH--------HHHHHT--------------
T ss_pred EcchHHHHhhhhcccCcc----cccccccccccccchhHHHHHH--HHHHHH--------Hhhhcc--------------
Confidence 999999999999998865 3456666655433221111110 000000 000000
Q ss_pred cCCHHHHHhhhhh-ccCCCCCHHHHH-HhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHh-cCCCEEEEEeCCCC
Q 008093 319 SRSIRDFDSHATC-LVGKFETVDTYY-RNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECR-ANKNVVLATTWHGG 395 (578)
Q Consensus 319 ~~s~~efd~~~~~-~~~g~~~~~~yy-~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~-~~~~~~l~~~~~GG 395 (578)
............ ............ ........+.++++|+|+++|++|.++|.+........ .++++++++++++|
T Consensus 139 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 217 (242)
T d1tqha_ 139 -KSEEQIEQEMEKFKQTPMKTLKALQELIADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSG 217 (242)
T ss_dssp -CCHHHHHHHHHHHTTSCCTTHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHCCCSSEEEEEETTCC
T ss_pred -chhhhHHHHHhhhhhhccchhhcccccccccccccceeccccceeecccCCccCHHHHHHHHHHcCCCCcEEEEECCCC
Confidence 000000000000 000001111000 01112346778999999999999999998865543322 35789999999999
Q ss_pred ccccccccccCcccHHHHHHHHHHhh
Q 008093 396 HLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 396 H~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
|+.+++ .++..+.+.|.+||+++
T Consensus 218 H~~~~~---~~~~~~~~~i~~Fl~~l 240 (242)
T d1tqha_ 218 HVITLD---QEKDQLHEDIYAFLESL 240 (242)
T ss_dssp SSGGGS---TTHHHHHHHHHHHHHHS
T ss_pred CcCccc---cCHHHHHHHHHHHHHhC
Confidence 999887 23456899999999975
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Probab=99.89 E-value=2.8e-23 Score=204.66 Aligned_cols=241 Identities=12% Similarity=0.050 Sum_probs=138.8
Q ss_pred CcEEEEECCCCCCCccHHHHHH---HHHHHhCCceEEEEeCCCCCCCCCCCCCCCC-CCchHHHHHHHHHHHHHCCCCcE
Q 008093 160 TPIAIVIPGLTSDSAASYIRHL---VFNTAKRGWNVVVSNHRGLGGVSITSDCFYN-AGWTEDAREVIGYLHHEYPKAPL 235 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l---~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~-~~~~~Dl~~~i~~l~~~~~~~~i 235 (578)
.|+|||+||+++++.. | ..+ ...+.++||+|+++|+||||.|.......+. ..+.+|+.++++.+ +..++
T Consensus 30 G~~ivllHG~~~~~~~-~-~~~~~~l~~~~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~i~~li~~l----~~~~~ 103 (283)
T d2rhwa1 30 GETVIMLHGGGPGAGG-W-SNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDAL----DIDRA 103 (283)
T ss_dssp SSEEEEECCCSTTCCH-H-HHHTTTHHHHHHTTCEEEEECCTTSTTSCCCCCSSCHHHHHHHHHHHHHHHH----TCCCE
T ss_pred CCeEEEECCCCCChhH-H-HHHHHHHHHHHHCCCEEEEEeCCCCcccccccccccccchhhhhcccccccc----ccccc
Confidence 4779999999665443 3 222 3345678999999999999998765433222 23345666666655 34689
Q ss_pred EEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHH---HHhHHHHHhhhcccccccCC
Q 008093 236 FAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRAL---TIGLQDYAQLHEPRYSRLAN 312 (578)
Q Consensus 236 ~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l---~~~l~~~~~~~~~~l~~~~d 312 (578)
+++||||||.+++.++.++|+ +++++|+++++....................... .............. .....
T Consensus 104 ~lvGhS~Gg~ia~~~a~~~p~--~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 180 (283)
T d2rhwa1 104 HLVGNAMGGATALNFALEYPD--RIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQMLQVFLYD-QSLIT 180 (283)
T ss_dssp EEEEETHHHHHHHHHHHHCGG--GEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHHHCSC-GGGCC
T ss_pred ccccccchHHHHHHHHHHhhh--hcceEEEeCCCcCCcchhhhhhHHHHHHHHHHhhhhhhhhHHHHHHHhhcc-cccCc
Confidence 999999999999999999998 8999999987532111100000000011110000 00000000000000 00000
Q ss_pred HHHHhc-----cCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEE
Q 008093 313 WEGIKK-----SRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVV 387 (578)
Q Consensus 313 ~~~i~~-----~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~ 387 (578)
.+.... ............... .......+....+.+|++|+|+++|++|+++|.+.... ..+..++++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~-~~~~~~~~~ 253 (283)
T d2rhwa1 181 EELLQGRWEAIQRQPEHLKNFLISAQ------KAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLK-LLWNIDDAR 253 (283)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHH------HSCGGGGCCGGGGGGCCSCEEEEEETTCSSSCTHHHHH-HHHHSSSEE
T ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhh------hhhccccchHHHHhhCCCCEEEEEeCCCCCcCHHHHHH-HHHhCCCCE
Confidence 000000 000000000000000 00001112345678899999999999999999875543 455678999
Q ss_pred EEEeCCCCccccccccccCcccHHHHHHHHHHh
Q 008093 388 LATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 388 l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
+.+++++||+.++|. |+ .+.+.|.+||++
T Consensus 254 ~~~i~~~gH~~~~e~--p~--~~~~~i~~FLk~ 282 (283)
T d2rhwa1 254 LHVFSKCGHWAQWEH--AD--EFNRLVIDFLRH 282 (283)
T ss_dssp EEEESSCCSCHHHHT--HH--HHHHHHHHHHHH
T ss_pred EEEECCCCCchHHhC--HH--HHHHHHHHHHhC
Confidence 999999999999883 33 588999999975
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Probab=99.89 E-value=7.3e-23 Score=206.36 Aligned_cols=128 Identities=13% Similarity=0.110 Sum_probs=93.8
Q ss_pred CeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCC
Q 008093 119 SYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHR 198 (578)
Q Consensus 119 ~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~R 198 (578)
+|+...+++.||.++++.-+.. ++.|+||++||+.|++..++ . ...+...||+|+++|+|
T Consensus 10 P~~~~~i~~~dg~~i~y~~~G~-----------------~~g~pvvllHG~~g~~~~~~--~-~~~~l~~~~~Vi~~D~r 69 (313)
T d1azwa_ 10 PYQQGSLKVDDRHTLYFEQCGN-----------------PHGKPVVMLHGGPGGGCNDK--M-RRFHDPAKYRIVLFDQR 69 (313)
T ss_dssp CSEEEEEECSSSCEEEEEEEEC-----------------TTSEEEEEECSTTTTCCCGG--G-GGGSCTTTEEEEEECCT
T ss_pred CCCCCEEEeCCCcEEEEEEecC-----------------CCCCEEEEECCCCCCccchH--H-HhHHhhcCCEEEEEecc
Confidence 6799999999999998775432 34567889999987665544 2 23344679999999999
Q ss_pred CCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 199 GLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 199 G~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
|||.|+...... ....+|+.+.+..+.+..+.++++++||||||.+++.+|..+|+ +++++|++++..
T Consensus 70 G~G~S~~~~~~~--~~~~~~~~~dl~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lv~~~~~~ 137 (313)
T d1azwa_ 70 GSGRSTPHADLV--DNTTWDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQ--QVTELVLRGIFL 137 (313)
T ss_dssp TSTTSBSTTCCT--TCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGG--GEEEEEEESCCC
T ss_pred ccCCCCcccccc--chhHHHHHHHHHHHHHhhccccceeEEecCCcHHHHHHHHHhhh--ceeeeeEecccc
Confidence 999997542221 11123444444444444556789999999999999999999998 899999988654
|
| >d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: XC6422 protein species: Xanthomonas campestris [TaxId: 339]
Probab=99.89 E-value=1.1e-21 Score=189.26 Aligned_cols=204 Identities=16% Similarity=0.084 Sum_probs=150.4
Q ss_pred eEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECC---CCCCCccHHHHHHHHHHHhCCceEEEEeC
Q 008093 121 RRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPG---LTSDSAASYIRHLVFNTAKRGWNVVVSNH 197 (578)
Q Consensus 121 ~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHG---l~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~ 197 (578)
....|..++| .+...+..+... .....+++|++|+ .+|+....+++.+++.|+++||.|+.+|+
T Consensus 9 ~~l~i~gp~G-~l~~~~~~p~~~------------~~~~~~~~vl~Hph~~~GG~~~~~~~~~la~~l~~~G~~vlrfd~ 75 (218)
T d2fuka1 9 AALTLDGPVG-PLDVAVDLPEPD------------VAVQPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNF 75 (218)
T ss_dssp EEEEEEETTE-EEEEEEECCCTT------------SCCCSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECC
T ss_pred eEEEEeCCCc-cEEEEEEcCCCC------------CCCCCcEEEEECCCCCCCcCCCChHHHHHHHHHHHcCCeEEEeec
Confidence 3345667888 454444433221 1234567789984 34544556678899999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhH
Q 008093 198 RGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDR 277 (578)
Q Consensus 198 RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~ 277 (578)
||+|.|...... ..++.+|+.++++++.++++..+++++||||||.+++.++... +++++|+++++.+..
T Consensus 76 RG~G~S~g~~~~--~~~~~~D~~a~~~~~~~~~~~~~v~l~G~S~Gg~va~~~a~~~----~~~~lil~ap~~~~~---- 145 (218)
T d2fuka1 76 RSVGTSAGSFDH--GDGEQDDLRAVAEWVRAQRPTDTLWLAGFSFGAYVSLRAAAAL----EPQVLISIAPPAGRW---- 145 (218)
T ss_dssp TTSTTCCSCCCT--TTHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHH----CCSEEEEESCCBTTB----
T ss_pred CCCccCCCccCc--CcchHHHHHHHHHHHhhcccCceEEEEEEcccchhhhhhhccc----ccceEEEeCCcccch----
Confidence 999999875432 3467799999999999999889999999999999999988865 467999998764210
Q ss_pred HHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCcc
Q 008093 278 FIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSI 357 (578)
Q Consensus 278 ~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~v 357 (578)
+ + ...++.+
T Consensus 146 ----------------------------------~-----------------------~--------------~~~~~~~ 154 (218)
T d2fuka1 146 ----------------------------------D-----------------------F--------------SDVQPPA 154 (218)
T ss_dssp ----------------------------------C-----------------------C--------------TTCCCCS
T ss_pred ----------------------------------h-----------------------h--------------hcccccc
Confidence 0 0 0013457
Q ss_pred ceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcC
Q 008093 358 PLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHS 423 (578)
Q Consensus 358 PvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~ 423 (578)
|+|+|+|++|+++|.+.............+++++++++| +|.+ ....+.+.+.+|+++.+.
T Consensus 155 P~Lvi~G~~D~~vp~~~~~~l~~~~~~~~~l~~i~ga~H--~f~~---~~~~l~~~~~~~v~~~l~ 215 (218)
T d2fuka1 155 QWLVIQGDADEIVDPQAVYDWLETLEQQPTLVRMPDTSH--FFHR---KLIDLRGALQHGVRRWLP 215 (218)
T ss_dssp SEEEEEETTCSSSCHHHHHHHHTTCSSCCEEEEETTCCT--TCTT---CHHHHHHHHHHHHGGGCS
T ss_pred ceeeEecCCCcCcCHHHHHHHHHHccCCceEEEeCCCCC--CCCC---CHHHHHHHHHHHHHHhcC
Confidence 999999999999999866554445556688999999999 3553 223588999999987654
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Probab=99.89 E-value=1.9e-23 Score=200.35 Aligned_cols=243 Identities=13% Similarity=0.004 Sum_probs=142.2
Q ss_pred EEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCC-CCchHHHHHHHHHHHHHCCCCcEEEEEEc
Q 008093 163 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN-AGWTEDAREVIGYLHHEYPKAPLFAIGTS 241 (578)
Q Consensus 163 VVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~-~~~~~Dl~~~i~~l~~~~~~~~i~lvGhS 241 (578)
.||+||++++ ...| +.++..|.++||+|+++|+||||.|+......++ ..+.+|+.++ +.+.....+++++|||
T Consensus 5 ~vliHG~~~~-~~~w-~~~~~~L~~~g~~Via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~lvGhS 79 (256)
T d3c70a1 5 FVLIHTICHG-AWIW-HKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTF---LEALPPGEKVILVGES 79 (256)
T ss_dssp EEEECCTTCC-GGGG-TTHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHTHHHHHH---HHHSCTTCCEEEEEET
T ss_pred EEEeCCCCCC-HHHH-HHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhh---hhhhccccceeecccc
Confidence 5899999654 4445 7889999999999999999999999765333332 2223344333 3444456789999999
Q ss_pred hHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHH----HHhhhcccccccCCHHHHh
Q 008093 242 IGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQD----YAQLHEPRYSRLANWEGIK 317 (578)
Q Consensus 242 mGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~----~~~~~~~~l~~~~d~~~i~ 317 (578)
|||.+++.++..+|+ +++++|+++++............ ...... ....... ...................
T Consensus 80 ~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (256)
T d3c70a1 80 CGGLNIAIAADKYCE--KIAAAVFHNSVLPDTEHCPSYVV---DKLMEV-FPDWKDTTYFTYTKDGKEITGLKLGFTLLR 153 (256)
T ss_dssp THHHHHHHHHHHHGG--GEEEEEEESCCCCCSSSCTTHHH---HHHHHH-SCCCTTCEEEEEEETTEEEEEEECCHHHHH
T ss_pred hHHHHHHHHhhcCch--hhhhhheeccccCCcccchhhHh---hhhhhh-hhhhhhhHHHhhhccccccchhhhhhhhhh
Confidence 999999999999998 89999999875432211100000 000000 0000000 0000000000001111100
Q ss_pred c--cCCHHHHHhh-hhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCC
Q 008093 318 K--SRSIRDFDSH-ATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHG 394 (578)
Q Consensus 318 ~--~~s~~efd~~-~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~G 394 (578)
. .......+.. ..........................+++|+++|+|++|+++|.+.... ..+..++.++.+++++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~-~~~~~p~~~~~~i~~a 232 (256)
T d3c70a1 154 ENLYTLCGPEEYELAKMLTRKGSLFQNILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLW-QIENYKPDKVYKVEGG 232 (256)
T ss_dssp HHTSTTSCHHHHHHHHHHCCCBCCCHHHHTTSCCCCTTTGGGSCEEEEECTTCSSSCHHHHHH-HHHHSCCSEEEECCSC
T ss_pred hhhhhhcchhhHHHhhhhhhhhhHHHhhhhhcchhhhhhccccceeEEeecCCCCCCHHHHHH-HHHHCCCCEEEEECCC
Confidence 0 0000001111 0111111122222333333344556678999999999999999775443 4566789999999999
Q ss_pred CccccccccccCcccHHHHHHHHHHhh
Q 008093 395 GHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 395 GH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
||+.++|. |+ .+.+.+.+|++++
T Consensus 233 gH~~~~e~--P~--~~~~~l~~~~~~~ 255 (256)
T d3c70a1 233 DHKLQLTK--TK--EIAEILQEVADTY 255 (256)
T ss_dssp CSCHHHHS--HH--HHHHHHHHHHHHC
T ss_pred CCchHHhC--HH--HHHHHHHHHHHhc
Confidence 99999993 43 5889999998764
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=99.88 E-value=2.4e-23 Score=198.73 Aligned_cols=247 Identities=12% Similarity=-0.005 Sum_probs=148.2
Q ss_pred cEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEE
Q 008093 161 PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGT 240 (578)
Q Consensus 161 PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGh 240 (578)
+.|||+||++++ ...| +.+++.|.++||+|+++|+||||.|+......+ ...+...++...+.......+++++||
T Consensus 3 ~~vvllHG~~~~-~~~w-~~~~~~L~~~g~~vi~~Dl~G~G~S~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~lvgh 78 (258)
T d1xkla_ 3 KHFVLVHGACHG-GWSW-YKLKPLLEAAGHKVTALDLAASGTDLRKIEELR--TLYDYTLPLMELMESLSADEKVILVGH 78 (258)
T ss_dssp CEEEEECCTTCC-GGGG-TTHHHHHHHTTCEEEECCCTTSTTCCCCGGGCC--SHHHHHHHHHHHHHTSCSSSCEEEEEE
T ss_pred CcEEEECCCCCC-HHHH-HHHHHHHHhCCCEEEEecCCCCCCCCCCCCCCc--chHHHHHHHhhhhhccccccccccccc
Confidence 568999999654 4445 789999999999999999999999976433222 223444455555555556678999999
Q ss_pred chHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhh-----cccccccCCHHH
Q 008093 241 SIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLH-----EPRYSRLANWEG 315 (578)
Q Consensus 241 SmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~-----~~~l~~~~d~~~ 315 (578)
||||.+++.++..+|+ ++.++|++++.......... ...................... ............
T Consensus 79 S~Gg~va~~~a~~~p~--~~~~lil~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (258)
T d1xkla_ 79 SLGGMNLGLAMEKYPQ--KIYAAVFLAAFMPDSVHNSS---FVLEQYNERTPAENWLDTQFLPYGSPEEPLTSMFFGPKF 153 (258)
T ss_dssp TTHHHHHHHHHHHCGG--GEEEEEEESCCCCCSSSCTT---HHHHHHHHTSCTTTTTTCEEEECSCTTSCCEEEECCHHH
T ss_pred chhHHHHHHHhhhhcc--ccceEEEecccCCCcccchH---HHHHHHhhhhhhhhhhhhhhhhhhhhhhhcccccccHHH
Confidence 9999999999999999 89999999865422111100 0000000000000000000000 000000000000
Q ss_pred ---HhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeC
Q 008093 316 ---IKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTW 392 (578)
Q Consensus 316 ---i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~ 392 (578)
........+...........................+..+++|+++|+|++|.++|.+.... ..+..++.++++++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~-~~~~~~~~~~~~i~ 232 (258)
T d1xkla_ 154 LAHKLYQLCSPEDLALASSLVRPSSLFMEDLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRW-QIDNIGVTEAIEIK 232 (258)
T ss_dssp HHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHCCCCCTTTGGGSCEEEEEETTCTTTTHHHHHH-HHHHHCCSEEEEET
T ss_pred HHHHhhhcccHHHHHHhhhhhhhhhhhhhhhhhhhhcccccccccceeEeeecCCCCCCHHHHHH-HHHHCCCCEEEEEC
Confidence 00011111111111111122222333344445556677889999999999999999775443 44556889999999
Q ss_pred CCCccccccccccCcccHHHHHHHHHHhh
Q 008093 393 HGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 393 ~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
++||+.++|. |+ .+.+.|.||++++
T Consensus 233 ~~gH~~~~e~--P~--~~~~~l~e~~~k~ 257 (258)
T d1xkla_ 233 GADHMAMLCE--PQ--KLCASLLEIAHKY 257 (258)
T ss_dssp TCCSCHHHHS--HH--HHHHHHHHHHHHC
T ss_pred CCCCchHHhC--HH--HHHHHHHHHHHhc
Confidence 9999999983 43 5899999998864
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Probab=99.87 E-value=6.9e-22 Score=189.13 Aligned_cols=239 Identities=10% Similarity=0.071 Sum_probs=128.9
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEE
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFA 237 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~l 237 (578)
..+|+|||+||++++ ...| ..+++.|.+.||+|+++|+||||.|+......+. ..+.......+.......++++
T Consensus 14 ~~~P~ivllHG~~~~-~~~~-~~~~~~L~~~g~~vi~~Dl~G~G~s~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l 88 (264)
T d1r3da_ 14 ARTPLVVLVHGLLGS-GADW-QPVLSHLARTQCAALTLDLPGHGTNPERHCDNFA---EAVEMIEQTVQAHVTSEVPVIL 88 (264)
T ss_dssp TTBCEEEEECCTTCC-GGGG-HHHHHHHTTSSCEEEEECCTTCSSCC-------C---HHHHHHHHHHHTTCCTTSEEEE
T ss_pred CCCCeEEEeCCCCCC-HHHH-HHHHHHHHhCCCEEEEEecccccccccccccccc---hhhhhhhhcccccccccCceee
Confidence 467899999999654 4445 7899999999999999999999998655332211 1111111112223335678999
Q ss_pred EEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchh---hhhHHHhhH-HHHHHHHHHHHHhHHHHHhh-hcccccccCC
Q 008093 238 IGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL---IGDRFIGRR-LIQKIYDRALTIGLQDYAQL-HEPRYSRLAN 312 (578)
Q Consensus 238 vGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~---~~~~~l~~~-~~~~~~~~~l~~~l~~~~~~-~~~~l~~~~d 312 (578)
+||||||.+++.++..+++ .+.+++.++.+.... ......... .................... .......
T Consensus 89 vGhS~Gg~ia~~~a~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 163 (264)
T d1r3da_ 89 VGYSLGGRLIMHGLAQGAF--SRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPIEHVLSDWYQQAVFS--- 163 (264)
T ss_dssp EEETHHHHHHHHHHHHTTT--TTSEEEEEEEESCCCCCCSHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHTTSGGGT---
T ss_pred eeecchHHHHHHHHHhCch--hccccccccccCCCccccchhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhc---
Confidence 9999999999999999998 666666554322111 110000000 00000000000000000000 0000000
Q ss_pred HHHHhccCCHHHHHhhhhhccCC-CCCHHHHHHh------CCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCC
Q 008093 313 WEGIKKSRSIRDFDSHATCLVGK-FETVDTYYRN------CSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKN 385 (578)
Q Consensus 313 ~~~i~~~~s~~efd~~~~~~~~g-~~~~~~yy~~------~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~ 385 (578)
................. .......... ......+..+++|+++|+|++|+.+. . ....++
T Consensus 164 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~l~i~G~~D~~~~-----~--~~~~~~ 230 (264)
T d1r3da_ 164 ------SLNHEQRQTLIAQRSANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKFQ-----Q--LAESSG 230 (264)
T ss_dssp ------TCCHHHHHHHHHHHTTSCHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHHH-----H--HHHHHC
T ss_pred ------ccchHHHHHHHHHHhhhhhhhhHHhhhhccccccccchhhhhccCcceEEEEeCCcHHHH-----H--HHhcCC
Confidence 00000000000000000 0001111111 11224567889999999999996532 1 122357
Q ss_pred EEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcC
Q 008093 386 VVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHS 423 (578)
Q Consensus 386 ~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~ 423 (578)
.++.+++++||+.++|. | ..+.+.|.+||+++.+
T Consensus 231 ~~~~~i~~~gH~~~~e~--P--~~~~~~i~~fl~~l~~ 264 (264)
T d1r3da_ 231 LSYSQVAQAGHNVHHEQ--P--QAFAKIVQAMIHSIID 264 (264)
T ss_dssp SEEEEETTCCSCHHHHC--H--HHHHHHHHHHHHHHCC
T ss_pred CeEEEECCCCCchHHHC--H--HHHHHHHHHHHHhccC
Confidence 89999999999999983 3 3699999999998753
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=99.87 E-value=4e-21 Score=199.34 Aligned_cols=238 Identities=15% Similarity=0.127 Sum_probs=158.0
Q ss_pred CCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeC
Q 008093 118 FSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 197 (578)
Q Consensus 118 ~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~ 197 (578)
.++++..|+. ||.++...++.|.. +.+.|+||++||+.|.. +.+ ..++..|.++||+|+++|+
T Consensus 104 ~~~e~v~ip~-dg~~l~g~l~~P~~--------------~~~~P~Vi~~hG~~~~~-e~~-~~~~~~l~~~G~~vl~~D~ 166 (360)
T d2jbwa1 104 PPAERHELVV-DGIPMPVYVRIPEG--------------PGPHPAVIMLGGLESTK-EES-FQMENLVLDRGMATATFDG 166 (360)
T ss_dssp SCEEEEEEEE-TTEEEEEEEECCSS--------------SCCEEEEEEECCSSCCT-TTT-HHHHHHHHHTTCEEEEECC
T ss_pred CCeEEeecCc-CCcccceEEEecCC--------------CCCceEEEEeCCCCccH-HHH-HHHHHHHHhcCCEEEEEcc
Confidence 4567887776 78889877766533 35679999999996644 434 4678889999999999999
Q ss_pred CCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhh
Q 008093 198 RGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIG 275 (578)
Q Consensus 198 RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~ 275 (578)
||||.|..... ....+..++..+++++...- +..+|.++||||||.+++.+|+..+ +|+++|++++..+....
T Consensus 167 ~G~G~s~~~~~--~~~~~~~~~~~v~d~l~~~~~vd~~rI~l~G~S~GG~~Al~~A~~~p---ri~a~V~~~~~~~~~~~ 241 (360)
T d2jbwa1 167 PGQGEMFEYKR--IAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAACEP---RLAACISWGGFSDLDYW 241 (360)
T ss_dssp TTSGGGTTTCC--SCSCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT---TCCEEEEESCCSCSTTG
T ss_pred ccccccCcccc--ccccHHHHHHHHHHHHHhcccccccceeehhhhcccHHHHHHhhcCC---CcceEEEEcccccHHHH
Confidence 99999864422 12345567778888887653 2357999999999999999998776 49999999887766432
Q ss_pred hHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCC
Q 008093 276 DRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNV 355 (578)
Q Consensus 276 ~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I 355 (578)
... ... ....+ .+ ........+... ......+....+.+|
T Consensus 242 ~~~--~~~----~~~~~-----~~----------------~~~~~~~~~~~~-------------~~~~~~~~~~~~~~i 281 (360)
T d2jbwa1 242 DLE--TPL----TKESW-----KY----------------VSKVDTLEEARL-------------HVHAALETRDVLSQI 281 (360)
T ss_dssp GGS--CHH----HHHHH-----HH----------------HTTCSSHHHHHH-------------HHHHHTCCTTTGGGC
T ss_pred hhh--hhh----hhHHH-----HH----------------hccCCchHHHHH-------------HHHhhcchhhhHhhC
Confidence 111 000 00000 00 000111111111 111222344567889
Q ss_pred ccceEEEEeCCCCCCCCCCcchH-HHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcC
Q 008093 356 SIPLLCISSLDDPVCTVEAIPWD-ECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHS 423 (578)
Q Consensus 356 ~vPvLiI~g~dDpivp~~~~~~~-~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~ 423 (578)
++|+|+++|++|++ |.+..... .....+++.++++++|||+.+.. + ......+.+||.+.+.
T Consensus 282 ~~P~Lii~G~~D~v-p~~~~~~l~~~~~~~~~~l~~~~~g~H~~~~~---~--~~~~~~i~dWl~~~L~ 344 (360)
T d2jbwa1 282 ACPTYILHGVHDEV-PLSFVDTVLELVPAEHLNLVVEKDGDHCCHNL---G--IRPRLEMADWLYDVLV 344 (360)
T ss_dssp CSCEEEEEETTSSS-CTHHHHHHHHHSCGGGEEEEEETTCCGGGGGG---T--THHHHHHHHHHHHHHT
T ss_pred CCCEEEEEeCCCCc-CHHHHHHHHHhcCCCCeEEEEECCCCcCCCcC---h--HHHHHHHHHHHHHHhc
Confidence 99999999999985 66543332 22234567888889999986533 2 2467889999988764
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Probab=99.86 E-value=1.8e-22 Score=202.34 Aligned_cols=105 Identities=14% Similarity=0.090 Sum_probs=81.6
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCC-CCC-CCchHHHHHHHHHHHHHCCCCcE
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDC-FYN-AGWTEDAREVIGYLHHEYPKAPL 235 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~-~~~-~~~~~Dl~~~i~~l~~~~~~~~i 235 (578)
+..|+||++||+++++. .| ..++..+.++||+|+++|+||||.|...... .|. ..+.+|+.++++++ +..++
T Consensus 45 ~~~p~llllHG~~~~~~-~~-~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l----~~~~~ 118 (310)
T d1b6ga_ 45 DAEDVFLCLHGEPTWSY-LY-RKMIPVFAESGARVIAPDFFGFGKSDKPVDEEDYTFEFHRNFLLALIERL----DLRNI 118 (310)
T ss_dssp TCSCEEEECCCTTCCGG-GG-TTTHHHHHHTTCEEEEECCTTSTTSCEESCGGGCCHHHHHHHHHHHHHHH----TCCSE
T ss_pred CCCCEEEEECCCCCchH-HH-HHHHHHhhccCceEEEeeecCccccccccccccccccccccchhhhhhhc----ccccc
Confidence 35688999999966544 44 5778889999999999999999999754322 222 23335555555544 45689
Q ss_pred EEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 236 FAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 236 ~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
+++||||||.+++.||.++|+ +|+++|+++++.
T Consensus 119 ~lvGhS~Gg~ia~~~A~~~P~--~V~~lvl~~~~~ 151 (310)
T d1b6ga_ 119 TLVVQDWGGFLGLTLPMADPS--RFKRLIIMNACL 151 (310)
T ss_dssp EEEECTHHHHHHTTSGGGSGG--GEEEEEEESCCC
T ss_pred ccccceecccccccchhhhcc--ccceEEEEcCcc
Confidence 999999999999999999999 899999998764
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Probab=99.85 E-value=1.4e-20 Score=183.87 Aligned_cols=270 Identities=14% Similarity=0.053 Sum_probs=149.7
Q ss_pred eEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCC
Q 008093 121 RRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGL 200 (578)
Q Consensus 121 ~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~ 200 (578)
+.++++. ||..+++.-. .++|+|||+||++++ ...| +.++..|++ +|+|+++|+|||
T Consensus 9 ~~~fi~~-~g~~i~y~~~-------------------G~g~~vvllHG~~~~-~~~~-~~~~~~L~~-~~~vi~~Dl~G~ 65 (298)
T d1mj5a_ 9 EKKFIEI-KGRRMAYIDE-------------------GTGDPILFQHGNPTS-SYLW-RNIMPHCAG-LGRLIACDLIGM 65 (298)
T ss_dssp CCEEEEE-TTEEEEEEEE-------------------SCSSEEEEECCTTCC-GGGG-TTTGGGGTT-SSEEEEECCTTS
T ss_pred CCEEEEE-CCEEEEEEEE-------------------cCCCcEEEECCCCCC-HHHH-HHHHHHHhc-CCEEEEEeCCCC
Confidence 4456666 8888875422 134779999999654 4445 677777764 799999999999
Q ss_pred CCCCCCCCCCCCCCch-HHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHH
Q 008093 201 GGVSITSDCFYNAGWT-EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFI 279 (578)
Q Consensus 201 G~S~~~~~~~~~~~~~-~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l 279 (578)
|.|+............ .++..++..+.+.....+++++||||||.+++.++.++|+ .|.++++++++..........
T Consensus 66 G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~--~v~~l~~~~~~~~~~~~~~~~ 143 (298)
T d1mj5a_ 66 GDSDKLDPSGPERYAYAEHRDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRE--RVQGIAYMEAIAMPIEWADFP 143 (298)
T ss_dssp TTSCCCSSCSTTSSCHHHHHHHHHHHHHHTTCTTCEEEEEEHHHHHHHHHHHHHTGG--GEEEEEEEEECCSCBCGGGSC
T ss_pred CCCCCCccccccccccchhhhhhccccccccccccCeEEEecccchhHHHHHHHHHh--hhheeeccccccccccchhhh
Confidence 9997654433333333 3444555556666667799999999999999999999999 899999887643221111000
Q ss_pred hh--HHHHHHH---HHHHHHhHHHHHhhhccc-ccccCCHHH----H---hccC-CHHHHHhhhhhccCCCCCHHHHHHh
Q 008093 280 GR--RLIQKIY---DRALTIGLQDYAQLHEPR-YSRLANWEG----I---KKSR-SIRDFDSHATCLVGKFETVDTYYRN 345 (578)
Q Consensus 280 ~~--~~~~~~~---~~~l~~~l~~~~~~~~~~-l~~~~d~~~----i---~~~~-s~~efd~~~~~~~~g~~~~~~yy~~ 345 (578)
.. ....... .................. ......... . .... .........................
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (298)
T d1mj5a_ 144 EQDRDLFQAFRSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIA 223 (298)
T ss_dssp GGGHHHHHHHHSTTHHHHHTTTCHHHHTHHHHTSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHHHHHHH
T ss_pred hhhhhhhhhhhhhhhhhhhhhhhhhhhhhccccccccchhhhhhhhhhhhccchhhhhhhhhhhhhhhhcchhhhhhhhh
Confidence 00 0000000 000000000000000000 000000000 0 0000 0000000000000001111111111
Q ss_pred CCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhc
Q 008093 346 CSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 346 ~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~ 422 (578)
......+.++++|+|+++|++|.+.+.. . ....+..++..+++. +|||+.+.|. | ..+.+.|.+||+++.
T Consensus 224 ~~~~~~~~~~~~P~l~i~g~~d~~~~~~-~-~~~~~~~p~~~~~~~-~~GH~~~~e~--P--~~v~~~i~~fl~~~~ 293 (298)
T d1mj5a_ 224 RDYAGWLSESPIPKLFINAEPGALTTGR-M-RDFCRTWPNQTEITV-AGAHFIQEDS--P--DEIGAAIAAFVRRLR 293 (298)
T ss_dssp HHHHHHHTTCCSCEEEEEEEECSSSSHH-H-HHHHTTCSSEEEEEE-EESSCGGGTC--H--HHHHHHHHHHHHHHS
T ss_pred hhhhhhhhhcceeEEEEecCCCCcChHH-H-HHHHHHCCCCEEEEe-CCCCchHHhC--H--HHHHHHHHHHHhhhc
Confidence 1123457889999999999999877643 2 234566788877665 5799999983 3 369999999999874
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Probab=99.84 E-value=3.7e-20 Score=181.86 Aligned_cols=130 Identities=16% Similarity=0.091 Sum_probs=96.7
Q ss_pred CCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeC
Q 008093 118 FSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 197 (578)
Q Consensus 118 ~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~ 197 (578)
-+|+..++++.||.+|.+....+ ++.|+|||+||+++++.. | ..+...+ .+||+|+++|+
T Consensus 9 ~p~~~~~v~~~dG~~i~y~~~G~-----------------~~g~pvvllHG~~~~~~~-w-~~~~~~l-~~~~~vi~~D~ 68 (313)
T d1wm1a_ 9 AAYDSGWLDTGDGHRIYWELSGN-----------------PNGKPAVFIHGGPGGGIS-P-HHRQLFD-PERYKVLLFDQ 68 (313)
T ss_dssp CCSEEEEEECSSSCEEEEEEEEC-----------------TTSEEEEEECCTTTCCCC-G-GGGGGSC-TTTEEEEEECC
T ss_pred CCCcCCEEEeCCCcEEEEEEecC-----------------CCCCeEEEECCCCCcccc-h-HHHHHHh-hcCCEEEEEeC
Confidence 46788999999999998765542 345678999999765554 4 4555444 46999999999
Q ss_pred CCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcc
Q 008093 198 RGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (578)
Q Consensus 198 RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d 271 (578)
||||.|....... .....+..+.+..+....+..+++++|||+||.+++.++...++ ++.++++++.+..
T Consensus 69 rG~G~S~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~vg~s~g~~~~~~~a~~~~~--~v~~~v~~~~~~~ 138 (313)
T d1wm1a_ 69 RGCGRSRPHASLD--NNTTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPE--RVSEMVLRGIFTL 138 (313)
T ss_dssp TTSTTCBSTTCCT--TCSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGG--GEEEEEEESCCCC
T ss_pred CCccccccccccc--ccchhhHHHHHHhhhhccCCCcceeEeeecCCchhhHHHHHHhh--hheeeeecccccc
Confidence 9999996543221 11234444444555556677899999999999999999999998 8999999887543
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Probab=99.84 E-value=4.4e-20 Score=184.85 Aligned_cols=245 Identities=12% Similarity=-0.005 Sum_probs=155.3
Q ss_pred CCCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEe
Q 008093 117 CFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSN 196 (578)
Q Consensus 117 ~~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D 196 (578)
.+.+++..++..||.+|...++.|.+ ..+.|+||++||++|+.. .+ ...+..++++||+|+++|
T Consensus 53 ~~~~~~v~~~~~dg~~i~~~l~~P~~--------------~~~~P~vv~~HG~~~~~~-~~-~~~~~~la~~Gy~vi~~D 116 (318)
T d1l7aa_ 53 GVKVYRLTYKSFGNARITGWYAVPDK--------------EGPHPAIVKYHGYNASYD-GE-IHEMVNWALHGYATFGML 116 (318)
T ss_dssp SEEEEEEEEEEGGGEEEEEEEEEESS--------------CSCEEEEEEECCTTCCSG-GG-HHHHHHHHHTTCEEEEEC
T ss_pred CeEEEEEEEECCCCcEEEEEEEecCC--------------CCCceEEEEecCCCCCcc-ch-HHHHHHHHHCCCEEEEEe
Confidence 44556677888899999877776643 356799999999966554 44 567888999999999999
Q ss_pred CCCCCCCCCCCCCCCCCC------------------chHHHHHHHHHHHHHCC--CCcEEEEEEchHHHHHHHHHhhcCC
Q 008093 197 HRGLGGVSITSDCFYNAG------------------WTEDAREVIGYLHHEYP--KAPLFAIGTSIGANILVKYLGEEGE 256 (578)
Q Consensus 197 ~RG~G~S~~~~~~~~~~~------------------~~~Dl~~~i~~l~~~~~--~~~i~lvGhSmGG~ial~ya~~~p~ 256 (578)
+||||.|........... ...|...+++++..+.. ..++.++|+|+||..++..+...+.
T Consensus 117 ~rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~v~~~~i~~~G~s~Gg~~~~~~~~~~~~ 196 (318)
T d1l7aa_ 117 VRGQQRSEDTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI 196 (318)
T ss_dssp CTTTSSSCCCCCCSSCCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC
T ss_pred eCCCCCCCCCcccchhhhhcchhhchhhhhhhhhHHHHHHHHHHHHHHHhcccccCcceEEEeeccccHHHHHHhhcCcc
Confidence 999999976533221111 12466777777766542 3469999999999999998888765
Q ss_pred CCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCC
Q 008093 257 KTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKF 336 (578)
Q Consensus 257 ~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~ 336 (578)
+.++++..+..................... .+ .............
T Consensus 197 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~----------------~~~~~~~~~~~~~-------- 241 (318)
T d1l7aa_ 197 ---PKAAVADYPYLSNFERAIDVALEQPYLEIN--------SF----------------FRRNGSPETEVQA-------- 241 (318)
T ss_dssp ---CSEEEEESCCSCCHHHHHHHCCSTTTTHHH--------HH----------------HHHSCCHHHHHHH--------
T ss_pred ---cceEEEeccccccHHHHhhcccccccchhh--------hh----------------hhccccccccccc--------
Confidence 777776665443221100000000000000 00 0000000000000
Q ss_pred CCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHH
Q 008093 337 ETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNE 416 (578)
Q Consensus 337 ~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~e 416 (578)
............+++|++|+|+++|.+|+++|.+...........++++.+++++||...- .+.+.+.+
T Consensus 242 ---~~~~~~~~~~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~~~l~~~~~~gH~~~~--------~~~~~~~~ 310 (318)
T d1l7aa_ 242 ---MKTLSYFDIMNLADRVKVPVLMSIGLIDKVTPPSTVFAAYNHLETKKELKVYRYFGHEYIP--------AFQTEKLA 310 (318)
T ss_dssp ---HHHHHTTCHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCSSEEEEEETTCCSSCCH--------HHHHHHHH
T ss_pred ---cccccccccccccccCCCCEEEEEECCCCCcCHHHHHHHHHHcCCCcEEEEECCCCCCCcH--------HHHHHHHH
Confidence 0011122334556789999999999999999987554433445567899999999994321 26788999
Q ss_pred HHHhhcC
Q 008093 417 YLGVLHS 423 (578)
Q Consensus 417 FL~~~~~ 423 (578)
||++.++
T Consensus 311 fl~~~Lk 317 (318)
T d1l7aa_ 311 FFKQILK 317 (318)
T ss_dssp HHHHHHC
T ss_pred HHHHhCC
Confidence 9998764
|
| >d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acylamino-acid-releasing enzyme, C-terminal donain domain: Acylamino-acid-releasing enzyme, C-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=99.83 E-value=4.1e-20 Score=181.98 Aligned_cols=238 Identities=16% Similarity=0.110 Sum_probs=160.5
Q ss_pred eEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCC-ccHHHHHHHHHHHhCCceEEEEeCCC
Q 008093 121 RRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDS-AASYIRHLVFNTAKRGWNVVVSNHRG 199 (578)
Q Consensus 121 ~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s-~~~yi~~l~~~l~~~Gy~Vvv~D~RG 199 (578)
+...++..||..|....+.|++. +.+.|+||++||.++++ ...| ...+..++++||.|+++|+||
T Consensus 13 ~~v~~~s~dG~~i~~~l~~p~~~-------------~~~~Pviv~~HGG~~~~~~~~~-~~~~~~la~~G~~v~~~d~r~ 78 (260)
T d2hu7a2 13 RLVWVESFDGSRVPTYVLESGRA-------------PTPGPTVVLVHGGPFAEDSDSW-DTFAASLAAAGFHVVMPNYRG 78 (260)
T ss_dssp EEEEEECTTSCEEEEEEEEETTS-------------CSSEEEEEEECSSSSCCCCSSC-CHHHHHHHHHTCEEEEECCTT
T ss_pred EEEEEECCCCCEEEEEEEeCCCC-------------CCCceEEEEECCCCccCCCccc-cHHHHHHHhhccccccceeee
Confidence 34468889999998777766442 24568999999832222 2233 567788889999999999999
Q ss_pred CCCCCCCCCC----CCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhh
Q 008093 200 LGGVSITSDC----FYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIG 275 (578)
Q Consensus 200 ~G~S~~~~~~----~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~ 275 (578)
+|++...... .+.....+|+.++++++.+.....++.++|+|+||.+++..+..+++ .+++++..++..+....
T Consensus 79 ~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~g~s~gg~~~~~~~~~~~~--~~~a~i~~~~~~~~~~~ 156 (260)
T d2hu7a2 79 STGYGEEWRLKIIGDPCGGELEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTMKPG--LFKAGVAGASVVDWEEM 156 (260)
T ss_dssp CSSSCHHHHHTTTTCTTTHHHHHHHHHHHHHHHTTCEEEEEEEEETHHHHHHHHHHHHSTT--SSSEEEEESCCCCHHHH
T ss_pred ccccccccccccccccchhhhhhhcccccccccccccceeeccccccccccccchhccCCc--ccccccccccchhhhhh
Confidence 9876332111 11123357999999999988766789999999999999999999988 78999998887765321
Q ss_pred hHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCC
Q 008093 276 DRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNV 355 (578)
Q Consensus 276 ~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I 355 (578)
.... ... +.... ... .....+.+...++...++++
T Consensus 157 ~~~~-~~~----~~~~~----~~~------------------------------------~~~~~~~~~~~~~~~~~~~~ 191 (260)
T d2hu7a2 157 YELS-DAA----FRNFI----EQL------------------------------------TGGSREIMRSRSPINHVDRI 191 (260)
T ss_dssp HHTC-CHH----HHHHH----HHH------------------------------------HCSCHHHHHHTCGGGCGGGC
T ss_pred hccc-ccc----ccccc----ccc------------------------------------cccccccccccchhhccccc
Confidence 1100 000 00000 000 00112344556677888899
Q ss_pred ccceEEEEeCCCCCCCCCCcch---HHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhc
Q 008093 356 SIPLLCISSLDDPVCTVEAIPW---DECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 356 ~vPvLiI~g~dDpivp~~~~~~---~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~ 422 (578)
++|+|+++|++|++||.+.... .+...+.++++.+++++||.-... .+...+.+.+.+||.+.+
T Consensus 192 ~~P~liihG~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~---e~~~~~~~~~~~fl~~hl 258 (260)
T d2hu7a2 192 KEPLALIHPQNDSRTPLKPLLRLMGELLARGKTFEAHIIPDAGHAINTM---EDAVKILLPAVFFLATQR 258 (260)
T ss_dssp CSCEEEEEETTCSSSCSHHHHHHHHHHHHTTCCEEEEEETTCCSSCCBH---HHHHHHHHHHHHHHHHHH
T ss_pred CCCceeeecccCceecHHHHHHHHHHHHHCCCCeEEEEECcCCCCCCCh---HhHHHHHHHHHHHHHHHh
Confidence 9999999999999999874332 233456778999999999943221 122235567888998754
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Probab=99.80 E-value=5e-19 Score=178.42 Aligned_cols=243 Identities=12% Similarity=0.015 Sum_probs=152.7
Q ss_pred CCCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEe
Q 008093 117 CFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSN 196 (578)
Q Consensus 117 ~~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D 196 (578)
.+..++..++..||.+|...++.|.+. +.+.|+||++||+++++.. + .....++++||.|+++|
T Consensus 52 ~~~~~~v~~~s~dG~~l~~~l~~P~~~-------------~~~~P~Vv~~hG~~~~~~~-~--~~~~~~a~~G~~v~~~D 115 (322)
T d1vlqa_ 52 TVEAYDVTFSGYRGQRIKGWLLVPKLE-------------EEKLPCVVQYIGYNGGRGF-P--HDWLFWPSMGYICFVMD 115 (322)
T ss_dssp SEEEEEEEEECGGGCEEEEEEEEECCS-------------CSSEEEEEECCCTTCCCCC-G--GGGCHHHHTTCEEEEEC
T ss_pred CeEEEEEEEECCCCcEEEEEEEeccCC-------------CCCccEEEEecCCCCCcCc-H--HHHHHHHhCCCEEEEee
Confidence 345666778889999999888776431 2456899999998655443 2 23456788999999999
Q ss_pred CCCCCCCCCCCCCCC--C-----------------------CCchHHHHHHHHHHHHHCC--CCcEEEEEEchHHHHHHH
Q 008093 197 HRGLGGVSITSDCFY--N-----------------------AGWTEDAREVIGYLHHEYP--KAPLFAIGTSIGANILVK 249 (578)
Q Consensus 197 ~RG~G~S~~~~~~~~--~-----------------------~~~~~Dl~~~i~~l~~~~~--~~~i~lvGhSmGG~ial~ 249 (578)
+||+|.|........ . .....|+..+++++..+.. ..++.++|+|+||.+++.
T Consensus 116 ~rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~a~~~~~~~~~~d~~ri~~~G~S~GG~~a~~ 195 (322)
T d1vlqa_ 116 TRGQGSGWLKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALA 195 (322)
T ss_dssp CTTCCCSSSCCCCCBCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHH
T ss_pred ccccCCCCCCccccccccccccccccchhhhchhhhhhhhhHHHHHHHHHHHHHHHhcCCcCchhccccccccchHHHHH
Confidence 999999855421100 0 0113577888888876542 347999999999999998
Q ss_pred HHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhh
Q 008093 250 YLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHA 329 (578)
Q Consensus 250 ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~ 329 (578)
.++..+ +++++++.++................... ...+.... .....
T Consensus 196 ~~~~~~---~~~a~v~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~---------------~~~~~------ 243 (322)
T d1vlqa_ 196 VSALSK---KAKALLCDVPFLCHFRRAVQLVDTHPYAE--------ITNFLKTH---------------RDKEE------ 243 (322)
T ss_dssp HHHHCS---SCCEEEEESCCSCCHHHHHHHCCCTTHHH--------HHHHHHHC---------------TTCHH------
T ss_pred HHhcCC---CccEEEEeCCccccHHHHHhhccccchhh--------HHhhhhcC---------------cchhh------
Confidence 777765 48888887765543221110000000000 00000000 00000
Q ss_pred hhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCccc
Q 008093 330 TCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMW 409 (578)
Q Consensus 330 ~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w 409 (578)
...+.+...++...+.+|++|+|+++|.+|+++|++...........++++.+++++||-+-.+ .
T Consensus 244 --------~~~~~~~~~d~~~~a~~i~~P~Lv~~G~~D~~vp~~~~~~~~~~~~~~~~l~~~p~~~H~~~~~-------~ 308 (322)
T d1vlqa_ 244 --------IVFRTLSYFDGVNFAARAKIPALFSVGLMDNICPPSTVFAAYNYYAGPKEIRIYPYNNHEGGGS-------F 308 (322)
T ss_dssp --------HHHHHHHTTCHHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCCSSEEEEEETTCCTTTTHH-------H
T ss_pred --------hHHHHhhhhhHHHHHhcCCCCEEEEEeCCCCCcCHHHHHHHHHHCCCCeEEEEECCCCCCCccc-------c
Confidence 1112222334556678899999999999999999876544344556678999999999943111 2
Q ss_pred HHHHHHHHHHhhc
Q 008093 410 WVRAVNEYLGVLH 422 (578)
Q Consensus 410 ~~~~v~eFL~~~~ 422 (578)
-.+...+||++++
T Consensus 309 ~~~~~~~~l~~~l 321 (322)
T d1vlqa_ 309 QAVEQVKFLKKLF 321 (322)
T ss_dssp HHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHh
Confidence 3345678988875
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Probab=99.80 E-value=2.2e-19 Score=166.97 Aligned_cols=183 Identities=15% Similarity=0.159 Sum_probs=121.3
Q ss_pred EEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEc
Q 008093 162 IAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTS 241 (578)
Q Consensus 162 iVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhS 241 (578)
.||++||++|+..+.|++.++..|+++||+|+++|+||+|.+. .+|..+.++.+... ...+++++|||
T Consensus 3 ~V~~vHG~~~~~~~~~~~~l~~~L~~~G~~v~~~d~p~~~~~~-----------~~~~~~~l~~~~~~-~~~~~~lvGhS 70 (186)
T d1uxoa_ 3 QVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMPNPLQPR-----------LEDWLDTLSLYQHT-LHENTYLVAHS 70 (186)
T ss_dssp EEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCSCTTSCC-----------HHHHHHHHHTTGGG-CCTTEEEEEET
T ss_pred EEEEECCCCCCcchhHHHHHHHHHHhCCCEEEEeccCCCCcch-----------HHHHHHHHHHHHhc-cCCCcEEEEec
Confidence 4899999988766666688999999999999999999998642 23333333333333 35689999999
Q ss_pred hHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCC
Q 008093 242 IGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRS 321 (578)
Q Consensus 242 mGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s 321 (578)
|||.+++.++.+.+....+.+++.++++..........
T Consensus 71 ~Gg~~a~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~------------------------------------------ 108 (186)
T d1uxoa_ 71 LGCPAILRFLEHLQLRAALGGIILVSGFAKSLPTLQML------------------------------------------ 108 (186)
T ss_dssp THHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTTCGGG------------------------------------------
T ss_pred hhhHHHHHHHHhCCccceeeEEeecccccccchhhhhh------------------------------------------
Confidence 99999999999998765677777766554322110000
Q ss_pred HHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCcccccc
Q 008093 322 IRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFE 401 (578)
Q Consensus 322 ~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~e 401 (578)
..+ ...... .....+++.|+|+|+|++|+++|.+.... ..... ++++++++++||+...+
T Consensus 109 -~~~-------~~~~~~----------~~~~~~~~~p~lvi~g~~D~~vp~~~~~~-l~~~~-~~~~~~~~~~gH~~~~~ 168 (186)
T d1uxoa_ 109 -DEF-------TQGSFD----------HQKIIESAKHRAVIASKDDQIVPFSFSKD-LAQQI-DAALYEVQHGGHFLEDE 168 (186)
T ss_dssp -GGG-------TCSCCC----------HHHHHHHEEEEEEEEETTCSSSCHHHHHH-HHHHT-TCEEEEETTCTTSCGGG
T ss_pred -hhh-------hccccc----------ccccccCCCCEEEEecCCCCCCCHHHHHH-HHHHc-CCEEEEeCCCCCcCccc
Confidence 000 000000 01112346899999999999999875443 22222 57899999999976555
Q ss_pred ccccCcccHHHHHHHHHH
Q 008093 402 GLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 402 g~~~~~~w~~~~v~eFL~ 419 (578)
+...- ..+.+.+.+||+
T Consensus 169 ~~~~~-~~~~~~l~~~~~ 185 (186)
T d1uxoa_ 169 GFTSL-PIVYDVLTSYFS 185 (186)
T ss_dssp TCSCC-HHHHHHHHHHHH
T ss_pred cCccc-HHHHHHHHHHHc
Confidence 43221 146677777775
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.77 E-value=5.2e-19 Score=170.09 Aligned_cols=100 Identities=22% Similarity=0.143 Sum_probs=74.4
Q ss_pred EEEEECCCCCCCccHHHHHHHHHHHhC--CceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEE
Q 008093 162 IAIVIPGLTSDSAASYIRHLVFNTAKR--GWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIG 239 (578)
Q Consensus 162 iVVllHGl~G~s~~~yi~~l~~~l~~~--Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG 239 (578)
+||++||+++++ ..| +.++..|.+. ||+|+++|+||||.|..... + ..+++.+.+..+.++.+ .+++++|
T Consensus 4 PvvllHG~~~~~-~~~-~~~~~~l~~~~~~~~v~~~d~~G~g~S~~~~~--~---~~~~~~~~l~~~l~~l~-~~~~lvG 75 (268)
T d1pjaa_ 4 PVIVVHGLFDSS-YSF-RHLLEYINETHPGTVVTVLDLFDGRESLRPLW--E---QVQGFREAVVPIMAKAP-QGVHLIC 75 (268)
T ss_dssp CEEEECCTTCCG-GGG-HHHHHHHHHHSTTCCEEECCSSCSGGGGSCHH--H---HHHHHHHHHHHHHHHCT-TCEEEEE
T ss_pred CEEEECCCCCCH-HHH-HHHHHHHHhhCCCeEEEEeCCCCCCCCCCccc--c---CHHHHHHHHHHHHhccC-CeEEEEc
Confidence 377899996644 445 7888888875 89999999999999864321 1 12333333333333444 6899999
Q ss_pred EchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 240 TSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 240 hSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
|||||.+++.||.++|+. +|+++|++++|.
T Consensus 76 hS~GG~ia~~~a~~~p~~-~v~~lvl~~~~~ 105 (268)
T d1pjaa_ 76 YSQGGLVCRALLSVMDDH-NVDSFISLSSPQ 105 (268)
T ss_dssp ETHHHHHHHHHHHHCTTC-CEEEEEEESCCT
T ss_pred cccHHHHHHHHHHHCCcc-ccceEEEECCCC
Confidence 999999999999999862 599999999765
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Probab=99.75 E-value=4e-17 Score=170.47 Aligned_cols=124 Identities=11% Similarity=0.046 Sum_probs=92.5
Q ss_pred EEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCC------ceEEEEeC
Q 008093 124 LFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRG------WNVVVSNH 197 (578)
Q Consensus 124 ~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~G------y~Vvv~D~ 197 (578)
+.+.-||..|++--... . .++.++|||+||+.+++.+ | +.++..|++.| |+||++|+
T Consensus 85 f~~~i~G~~iHf~h~~~-~--------------~~~~~pLlLlHG~P~s~~~-w-~~vi~~La~~g~~~~~~f~VIaPDL 147 (394)
T d1qo7a_ 85 FTTEIEGLTIHFAALFS-E--------------REDAVPIALLHGWPGSFVE-F-YPILQLFREEYTPETLPFHLVVPSL 147 (394)
T ss_dssp EEEEETTEEEEEEEECC-S--------------CTTCEEEEEECCSSCCGGG-G-HHHHHHHHHHCCTTTCCEEEEEECC
T ss_pred eEEEECCEEEEEEEEec-c--------------CCCCCEEEEeccccccHHH-H-HHHHHhhccccCCcccceeeecccc
Confidence 33444898887643322 1 3567789999999775554 5 68999999988 99999999
Q ss_pred CCCCCCCCCCC-CCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCC
Q 008093 198 RGLGGVSITSD-CFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSP 269 (578)
Q Consensus 198 RG~G~S~~~~~-~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p 269 (578)
||+|.|+.... ..|. ..++.+.+..+....+..+.+++|||+||.++..+++.+++ .+.+++++..+
T Consensus 148 pG~G~S~~P~~~~~y~---~~~~a~~~~~l~~~lg~~~~~~vg~~~Gg~v~~~~a~~~p~--~~~~~~l~~~~ 215 (394)
T d1qo7a_ 148 PGYTFSSGPPLDKDFG---LMDNARVVDQLMKDLGFGSGYIIQGGDIGSFVGRLLGVGFD--ACKAVHLNLCA 215 (394)
T ss_dssp TTSTTSCCCCSSSCCC---HHHHHHHHHHHHHHTTCTTCEEEEECTHHHHHHHHHHHHCT--TEEEEEESCCC
T ss_pred cccCCCCCCCCCCccC---HHHHHHHHHHHHhhccCcceEEEEecCchhHHHHHHHHhhc--cccceeEeeec
Confidence 99999976432 2222 34555555566666667789999999999999999999998 78888777654
|
| >d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl peptidase IV/CD26, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.73 E-value=6.7e-17 Score=158.17 Aligned_cols=243 Identities=12% Similarity=0.028 Sum_probs=152.3
Q ss_pred CCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCC----CCCCccHHHHHHHHHHHhCCceEE
Q 008093 118 FSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGL----TSDSAASYIRHLVFNTAKRGWNVV 193 (578)
Q Consensus 118 ~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl----~G~s~~~yi~~l~~~l~~~Gy~Vv 193 (578)
+++++..+...||.++.++.+.|++-. .+..-|+||++||. .+.....+ ......++++||.|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~l~lP~~~~-----------~~kk~P~iv~~HGGp~~~~~~~~~~~-~~~~~~~a~~g~~V~ 68 (258)
T d2bgra2 1 MPSKKLDFIILNETKFWYQMILPPHFD-----------KSKKYPLLLDVYAGPCSQKADTVFRL-NWATYLASTENIIVA 68 (258)
T ss_dssp CCEEEEEEEEETTEEEEEEEEECTTCC-----------TTSCEEEEEECCCCTTCCCCCCCCCC-SHHHHHHHTTCCEEE
T ss_pred CCceeEEEEEeCCcEEEEEEEECCCcC-----------CCCCeeEEEEEcCCCCcccCCCccCc-CHHHHHHhcCCcEEE
Confidence 356788888999999999998886521 12344899999994 12222211 223445678999999
Q ss_pred EEeCCCCCCCCCCCC----CCCCCCchHHHHHHHHHHHHHCC--CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEc
Q 008093 194 VSNHRGLGGVSITSD----CFYNAGWTEDAREVIGYLHHEYP--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAIC 267 (578)
Q Consensus 194 v~D~RG~G~S~~~~~----~~~~~~~~~Dl~~~i~~l~~~~~--~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis 267 (578)
.+|+||.|....... ..+.....+|+.++++++.++.. ..++.++|+|+||.+++..+...++ ...+++..+
T Consensus 69 ~~d~rg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~i~i~G~S~GG~~~~~~~~~~~~--~~~~~~~~~ 146 (258)
T d2bgra2 69 SFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSG--VFKCGIAVA 146 (258)
T ss_dssp EECCTTCSSSCHHHHGGGTTCTTSHHHHHHHHHHHHHTTSSSEEEEEEEEEEETHHHHHHHHHHTTTCS--CCSEEEEES
T ss_pred eecccccCCcchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcccccccccccCcchhhcccccccccCCC--cceEEEEee
Confidence 999999876432110 11112234567777888776542 3479999999999999999999887 566666555
Q ss_pred CCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCC
Q 008093 268 SPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCS 347 (578)
Q Consensus 268 ~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s 347 (578)
............. .... .........+++...+
T Consensus 147 ~~~~~~~~~~~~~--------~~~~---------------------------------------~~~~~~~~~~~~~~~~ 179 (258)
T d2bgra2 147 PVSRWEYYDSVYT--------ERYM---------------------------------------GLPTPEDNLDHYRNST 179 (258)
T ss_dssp CCCCGGGSBHHHH--------HHHH---------------------------------------CCCSTTTTHHHHHHSC
T ss_pred ccccccccccccc--------chhc---------------------------------------ccccchhhHHHhhccc
Confidence 4332211110000 0000 0001112223344455
Q ss_pred cccccCCC-ccceEEEEeCCCCCCCCCCcch---HHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcC
Q 008093 348 SSTYVGNV-SIPLLCISSLDDPVCTVEAIPW---DECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHS 423 (578)
Q Consensus 348 ~~~~l~~I-~vPvLiI~g~dDpivp~~~~~~---~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~ 423 (578)
....+.++ ++|+|++||++|++||...... .+.....++++.+++++|| +|... .....+.+.+.+||++.++
T Consensus 180 ~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~l~~~g~~~~~~~~~g~~H-~~~~~--~~~~~~~~~i~~fl~~~l~ 256 (258)
T d2bgra2 180 VMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDH-GIASS--TAHQHIYTHMSHFIKQCFS 256 (258)
T ss_dssp SGGGGGGGGGSEEEEEEETTCSSSCTHHHHHHHHHHHHHTCCCEEEEETTCCT-TCCSH--HHHHHHHHHHHHHHHHHTT
T ss_pred ccccccccccCChheeeecCCCcccHHHHHHHHHHHHHCCCCEEEEEECCCCC-CCCCC--ccHHHHHHHHHHHHHHHhc
Confidence 56666666 4899999999999999864322 2345567889999999999 44331 1122467889999988664
Q ss_pred C
Q 008093 424 S 424 (578)
Q Consensus 424 ~ 424 (578)
.
T Consensus 257 ~ 257 (258)
T d2bgra2 257 L 257 (258)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: Hypothetical protein Atu1826 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.73 E-value=3.9e-16 Score=149.75 Aligned_cols=203 Identities=20% Similarity=0.237 Sum_probs=149.8
Q ss_pred EEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECC---CCCCCccHHHHHHHHHHHhCCceEEEEeCCC
Q 008093 123 QLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPG---LTSDSAASYIRHLVFNTAKRGWNVVVSNHRG 199 (578)
Q Consensus 123 ~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHG---l~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG 199 (578)
..|..++| .|...| .++. ...+|++|++|| ++|+.....+..+++.+.+.||.|+.+|+||
T Consensus 3 v~i~g~~G-~Le~~~-~~~~--------------~~~~~~~l~~Hp~p~~GG~~~~~~~~~~a~~l~~~G~~~lrfn~RG 66 (218)
T d2i3da1 3 VIFNGPAG-RLEGRY-QPSK--------------EKSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRS 66 (218)
T ss_dssp EEEEETTE-EEEEEE-ECCS--------------STTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTT
T ss_pred EEEeCCCc-cEEEEE-eCCC--------------CCCCCEEEEECCCcCcCCcCCcHHHHHHHHHHHhcCeeEEEEecCc
Confidence 46788888 677544 4332 246789999998 4555566666788999999999999999999
Q ss_pred CCCCCCCCCCCCCCCchHHHHHHHHHHHHHCC-CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHH
Q 008093 200 LGGVSITSDCFYNAGWTEDAREVIGYLHHEYP-KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRF 278 (578)
Q Consensus 200 ~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~-~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~ 278 (578)
.|.|.+..+. ..+..+|..++++++..+.+ ..+++++|+|+||.+++.++.+.+. +.+++++.++....
T Consensus 67 ~g~S~G~~~~--~~~e~~d~~aa~~~~~~~~~~~~~~~~~g~S~G~~~a~~~a~~~~~---~~~~~~~~~~~~~~----- 136 (218)
T d2i3da1 67 IGRSQGEFDH--GAGELSDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRPE---IEGFMSIAPQPNTY----- 136 (218)
T ss_dssp STTCCSCCCS--SHHHHHHHHHHHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHHCTT---EEEEEEESCCTTTS-----
T ss_pred cCCCcccccc--chhHHHHHHHHHhhhhcccccccceeEEeeehHHHHHHHHHHhhcc---ccceeecccccccc-----
Confidence 9999866432 23455899999999998874 4689999999999999999887664 67777776553210
Q ss_pred HhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccc
Q 008093 279 IGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIP 358 (578)
Q Consensus 279 l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vP 358 (578)
....+..+..|
T Consensus 137 ---------------------------------------------------------------------~~~~~~~~~~p 147 (218)
T d2i3da1 137 ---------------------------------------------------------------------DFSFLAPCPSS 147 (218)
T ss_dssp ---------------------------------------------------------------------CCTTCTTCCSC
T ss_pred ---------------------------------------------------------------------chhhccccCCC
Confidence 01223445789
Q ss_pred eEEEEeCCCCCCCCCCcchHHH----hcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcCCC
Q 008093 359 LLCISSLDDPVCTVEAIPWDEC----RANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSSP 425 (578)
Q Consensus 359 vLiI~g~dDpivp~~~~~~~~~----~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~~~ 425 (578)
+|+++|..|.+++.+....... ....+.++.++++++| ||.| ....+.+.+.+||++.+..+
T Consensus 148 ~l~i~g~~D~~~~~~~~~~l~~~~~~~~~~~~~~~vi~gAdH--fF~g---~~~~l~~~v~~~l~~~l~~~ 213 (218)
T d2i3da1 148 GLIINGDADKVAPEKDVNGLVEKLKTQKGILITHRTLPGANH--FFNG---KVDELMGECEDYLDRRLNGE 213 (218)
T ss_dssp EEEEEETTCSSSCHHHHHHHHHHHTTSTTCCEEEEEETTCCT--TCTT---CHHHHHHHHHHHHHHHHTTC
T ss_pred ceeeecccceecChHHHHHHHHHHhhccCCCccEEEeCCCCC--CCcC---CHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999775433221 2345679999999999 4554 22358899999999877654
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Probab=99.72 E-value=6.9e-17 Score=155.17 Aligned_cols=200 Identities=15% Similarity=0.073 Sum_probs=121.1
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCch----H----HHHHHHHHHHH-
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWT----E----DAREVIGYLHH- 228 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~----~----Dl~~~i~~l~~- 228 (578)
+++|+||++||++| +...| ..+++.|+++||.|+++|+||||.|............. . ++.++...+..
T Consensus 22 ~~~~~vl~lHG~~~-~~~~~-~~~~~~la~~G~~V~~~D~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (238)
T d1ufoa_ 22 APKALLLALHGLQG-SKEHI-LALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEA 99 (238)
T ss_dssp SCCEEEEEECCTTC-CHHHH-HHTSTTTGGGTEEEEECCCTTSTTSSCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEeCCCCC-CHHHH-HHHHHHHHHCCCEEEEecCCCCCCCcccccccccchhhhhhhhhHHhHHHHHHHHhhhc
Confidence 45799999999965 55555 67889999999999999999999987654433222221 1 12222222211
Q ss_pred -HCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccc
Q 008093 229 -EYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRY 307 (578)
Q Consensus 229 -~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l 307 (578)
.....++.++|+||||.+++.+++.++. +.+++.+.++.+...........
T Consensus 100 ~~~~~~~v~~~G~S~Gg~~a~~~~~~~p~---~~~~~~~~~~~~~~~~~~~~~~~------------------------- 151 (238)
T d1ufoa_ 100 ERRFGLPLFLAGGSLGAFVAHLLLAEGFR---PRGVLAFIGSGFPMKLPQGQVVE------------------------- 151 (238)
T ss_dssp HHHHCCCEEEEEETHHHHHHHHHHHTTCC---CSCEEEESCCSSCCCCCTTCCCC-------------------------
T ss_pred cccCCceEEEEEecccHHHHHHHHhcCcc---hhheeeeeeeccccccccccccc-------------------------
Confidence 1134689999999999999999998876 66666665544322110000000
Q ss_pred cccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHH---Hh--c
Q 008093 308 SRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDE---CR--A 382 (578)
Q Consensus 308 ~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~---~~--~ 382 (578)
. . .....+............++|+|+++|++|.++|.+...... .. .
T Consensus 152 ----~----------~--------------~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~l~~~~~ 203 (238)
T d1ufoa_ 152 ----D----------P--------------GVLALYQAPPATRGEAYGGVPLLHLHGSRDHIVPLARMEKTLEALRPHYP 203 (238)
T ss_dssp ----C----------H--------------HHHHHHHSCGGGCGGGGTTCCEEEEEETTCTTTTHHHHHHHHHHHGGGCT
T ss_pred ----c----------c--------------cccchhhhhhhhhhhhhcCCCeEEEEcCCCCccCHHHHHHHHHHHHhcCC
Confidence 0 0 000011111111222334689999999999999987433211 11 2
Q ss_pred CCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcC
Q 008093 383 NKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHS 423 (578)
Q Consensus 383 ~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~ 423 (578)
..++.+...+++||..--+ ..+.+.+|+++.++
T Consensus 204 ~~~~~~~~~~g~gH~~~~~--------~~~~~~~f~~~~l~ 236 (238)
T d1ufoa_ 204 EGRLARFVEEGAGHTLTPL--------MARVGLAFLEHWLE 236 (238)
T ss_dssp TCCEEEEEETTCCSSCCHH--------HHHHHHHHHHHHHH
T ss_pred CceEEEEEECCCCCccCHH--------HHHHHHHHHHHHhc
Confidence 2467888999999964322 44566777776543
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Probab=99.69 E-value=5.4e-17 Score=154.53 Aligned_cols=213 Identities=13% Similarity=0.103 Sum_probs=125.5
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEE
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFA 237 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~l 237 (578)
+.+++||++||++| +...| ..+++.|. +|.|+++|++|+|.+ .+| .++.+.+..+..++++
T Consensus 15 ~~~~~l~~lhg~~g-~~~~~-~~la~~L~--~~~v~~~~~~g~~~~------------a~~---~~~~i~~~~~~~~~~l 75 (230)
T d1jmkc_ 15 DQEQIIFAFPPVLG-YGLMY-QNLSSRLP--SYKLCAFDFIEEEDR------------LDR---YADLIQKLQPEGPLTL 75 (230)
T ss_dssp TCSEEEEEECCTTC-CGGGG-HHHHHHCT--TEEEEEECCCCSTTH------------HHH---HHHHHHHHCCSSCEEE
T ss_pred CCCCeEEEEcCCCC-CHHHH-HHHHHHCC--CCEEeccCcCCHHHH------------HHH---HHHHHHHhCCCCcEEE
Confidence 45688999999966 44556 78888884 799999999998742 344 4445556667789999
Q ss_pred EEEchHHHHHHHHHhhcCCCC-CccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHH
Q 008093 238 IGTSIGANILVKYLGEEGEKT-PVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGI 316 (578)
Q Consensus 238 vGhSmGG~ial~ya~~~p~~~-~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i 316 (578)
+||||||.+++.+|.+.++.. .+..++.+.++............ .......+....... ....+...
T Consensus 76 vGhS~GG~vA~~~A~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~----~~~~~~~~- 143 (230)
T d1jmkc_ 76 FGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSDLDGRT-------VESDVEALMNVNRDN----EALNSEAV- 143 (230)
T ss_dssp EEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC---------------CCHHHHHHHTTTC----SGGGSHHH-
T ss_pred EeeccChHHHHHHHHhhhhhCccceeeecccccCccchhhhhhhh-------hhhhhhhhhhccccc----cccccHHH-
Confidence 999999999999998766421 56667766654322211100000 000000000000000 00000000
Q ss_pred hccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCc
Q 008093 317 KKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGH 396 (578)
Q Consensus 317 ~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH 396 (578)
...+.. ....++..........++++|+++|+|++|+.++.....+ ......+..+.+++ |||
T Consensus 144 -----~~~~~~----------~~~~~~~~~~~~~~~~~i~~p~l~i~g~~D~~~~~~~~~w-~~~~~~~~~~~~i~-g~H 206 (230)
T d1jmkc_ 144 -----KHGLKQ----------KTHAFYSYYVNLISTGQVKADIDLLTSGADFDIPEWLASW-EEATTGAYRMKRGF-GTH 206 (230)
T ss_dssp -----HHHHHH----------HHHHHHHHHHHCCCCSCBSSEEEEEECSSCCCCCTTEECS-GGGBSSCEEEEECS-SCG
T ss_pred -----HHHHHH----------HHHHHHHhhhcccccccccCcceeeeecCCcccchhHHHH-HHhccCCcEEEEEc-CCC
Confidence 000110 0112222222234567889999999999999998764443 33445678888888 699
Q ss_pred cccccccccCcccHHHHHHHHHHh
Q 008093 397 LAFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 397 ~~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
..+++. +....+.+.|.+||++
T Consensus 207 ~~ml~~--~~~~~va~~I~~~L~~ 228 (230)
T d1jmkc_ 207 AEMLQG--ETLDRNAGILLEFLNT 228 (230)
T ss_dssp GGTTSH--HHHHHHHHHHHHHHTC
T ss_pred hhhcCC--ccHHHHHHHHHHHHhh
Confidence 999983 2223467777777764
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.68 E-value=3.1e-16 Score=156.52 Aligned_cols=222 Identities=14% Similarity=0.068 Sum_probs=131.7
Q ss_pred CCCCcEEEEECCCC-CCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHH-HHHHHHHHHCCCCc
Q 008093 157 DDTTPIAIVIPGLT-SDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAR-EVIGYLHHEYPKAP 234 (578)
Q Consensus 157 ~~~~PiVVllHGl~-G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~-~~i~~l~~~~~~~~ 234 (578)
.+.+|.++++||+. |++...| ..++..|.. +++|+++|++|||.++......... ..+++. .+++.+....+..|
T Consensus 57 ~~~~~~l~c~~~~~~~g~~~~y-~~la~~L~~-~~~V~al~~pG~~~~~~~~~~~~~~-s~~~~a~~~~~~i~~~~~~~P 133 (283)
T d2h7xa1 57 AEGRAVLVGCTGTAANGGPHEF-LRLSTSFQE-ERDFLAVPLPGYGTGTGTGTALLPA-DLDTALDAQARAILRAAGDAP 133 (283)
T ss_dssp -CCCCEEEEECCCCTTCSTTTT-HHHHHTTTT-TCCEEEECCTTCCBC---CBCCEES-SHHHHHHHHHHHHHHHHTTSC
T ss_pred CCCCceEEEeCCCCCCCCHHHH-HHHHHhcCC-CceEEEEeCCCCCCCCCCccccccC-CHHHHHHHHHHHHHHhcCCCc
Confidence 35678899999974 4444556 778888765 6999999999999887554332222 234443 45566777778889
Q ss_pred EEEEEEchHHHHHHHHHhhcCC--CCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCC
Q 008093 235 LFAIGTSIGANILVKYLGEEGE--KTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLAN 312 (578)
Q Consensus 235 i~lvGhSmGG~ial~ya~~~p~--~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d 312 (578)
++++||||||.+++.+|.+.++ ...+.++|+++++.......... +...+...+. . ..+. ..+
T Consensus 134 ~vL~GhS~GG~vA~e~A~~l~~~~g~~v~~LvL~d~~~~~~~~~~~~--------~~~~~~~~~~---~---~~~~-~~~ 198 (283)
T d2h7xa1 134 VVLLGHSGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEPIEV--------WSRQLGEGLF---A---GELE-PMS 198 (283)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTCCHHHHH--------THHHHHHHHH---H---TCSS-CCC
T ss_pred eEEEEeccchHHHHHHHHhhHHHcCCCceEEEEecCCccccccchhh--------hhhhhHHHhh---c---cccc-ccc
Confidence 9999999999999999876432 12799999998754322111000 0000000000 0 0000 011
Q ss_pred HHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeC
Q 008093 313 WEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTW 392 (578)
Q Consensus 313 ~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~ 392 (578)
...+. .+... ...+. ......+++|+++|+|++|+.++.+..............+..++
T Consensus 199 ~~~l~------a~~~~-----------~~~~~----~~~~~~~~~Pvl~i~g~~d~~~~~~~~~~w~~~~~~~~~~~~v~ 257 (283)
T d2h7xa1 199 DARLL------AMGRY-----------ARFLA----GPRPGRSSAPVLLVRASEPLGDWQEERGDWRAHWDLPHTVADVP 257 (283)
T ss_dssp HHHHH------HHHHH-----------HHHHH----SCCCCCCCSCEEEEEESSCSSCCCGGGCCCSCCCSSCSEEEEES
T ss_pred cHHHH------HHHHH-----------HHHHh----hccccccCCCeEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEEEc
Confidence 11110 00000 01111 12346789999999999999998774432222233446777777
Q ss_pred CCCccccccccccCcccHHHHHHHHHHhh
Q 008093 393 HGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 393 ~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
|||+.+++. +...+.+.|.+||+++
T Consensus 258 -G~H~~ml~e---~~~~vA~~i~~~L~~l 282 (283)
T d2h7xa1 258 -GDHFTMMRD---HAPAVAEAVLSWLDAI 282 (283)
T ss_dssp -SCTTHHHHT---THHHHHHHHHHHHHHH
T ss_pred -CCCcccccC---CHHHHHHHHHHHHHhc
Confidence 589887762 2335789999999875
|
| >d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Lipase domain: Lipase species: Streptomyces exfoliatus [TaxId: 1905]
Probab=99.68 E-value=1.3e-15 Score=149.93 Aligned_cols=174 Identities=14% Similarity=0.094 Sum_probs=130.7
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC------C
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY------P 231 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~------~ 231 (578)
...|+||++||++| +...| ..+++.|+++||.|+++|++|++..+ .....|+.++++++.... +
T Consensus 50 g~~P~Vv~~HG~~g-~~~~~-~~~a~~lA~~Gy~V~~~d~~~~~~~~--------~~~~~d~~~~~~~l~~~~~~~~~vD 119 (260)
T d1jfra_ 50 GTFGAVVISPGFTA-YQSSI-AWLGPRLASQGFVVFTIDTNTTLDQP--------DSRGRQLLSALDYLTQRSSVRTRVD 119 (260)
T ss_dssp CCEEEEEEECCTTC-CGGGT-TTHHHHHHTTTCEEEEECCSSTTCCH--------HHHHHHHHHHHHHHHHTSTTGGGEE
T ss_pred CCccEEEEECCCCC-CHHHH-HHHHHHHHhCCCEEEEEeeCCCcCCc--------hhhHHHHHHHHHHHHhhhhhhcccc
Confidence 34589999999965 44455 77899999999999999999887542 234578889999987753 2
Q ss_pred CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccC
Q 008093 232 KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLA 311 (578)
Q Consensus 232 ~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~ 311 (578)
..+|.++||||||.+++.++...+. +.++|.+++...
T Consensus 120 ~~rI~v~G~S~GG~~al~aa~~~~~---~~A~v~~~~~~~---------------------------------------- 156 (260)
T d1jfra_ 120 ATRLGVMGHSMGGGGSLEAAKSRTS---LKAAIPLTGWNT---------------------------------------- 156 (260)
T ss_dssp EEEEEEEEETHHHHHHHHHHHHCTT---CSEEEEESCCCS----------------------------------------
T ss_pred ccceEEEeccccchHHHHHHhhhcc---chhheeeecccc----------------------------------------
Confidence 4579999999999999998887764 888887754320
Q ss_pred CHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHH---hcCCCEEE
Q 008093 312 NWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDEC---RANKNVVL 388 (578)
Q Consensus 312 d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~---~~~~~~~l 388 (578)
...+.++++|+|+++|++|.++|.+....... .......+
T Consensus 157 -------------------------------------~~~~~~~~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~~~~~~~ 199 (260)
T d1jfra_ 157 -------------------------------------DKTWPELRTPTLVVGADGDTVAPVATHSKPFYESLPGSLDKAY 199 (260)
T ss_dssp -------------------------------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHHSCTTSCEEE
T ss_pred -------------------------------------cccccccccceeEEecCCCCCCCHHHHHHHHHHhcccCCCEEE
Confidence 01234578999999999999999874332222 23446788
Q ss_pred EEeCCCCccccccccccCcccHHHHHHHHHHhhcCCC
Q 008093 389 ATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSSP 425 (578)
Q Consensus 389 ~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~~~ 425 (578)
+++++++|..+.. ....+.+.+..||+..+...
T Consensus 200 ~~i~ga~H~~~~~----~~~~~~~~~~~wl~~~L~~d 232 (260)
T d1jfra_ 200 LELRGASHFTPNT----SDTTIAKYSISWLKRFIDSD 232 (260)
T ss_dssp EEETTCCTTGGGS----CCHHHHHHHHHHHHHHHSCC
T ss_pred EEECCCccCCCCC----ChHHHHHHHHHHHHHHhcCc
Confidence 9999999976544 23357888999999987665
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Probab=99.67 E-value=2.4e-16 Score=146.38 Aligned_cols=170 Identities=12% Similarity=0.066 Sum_probs=126.6
Q ss_pred EEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEch
Q 008093 163 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSI 242 (578)
Q Consensus 163 VVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSm 242 (578)
|||+||+++ +...| ..+++.|.++||+++.++.+|++.+..... ...+++.+.++.+.++.+..++.++||||
T Consensus 5 Vv~vHG~~~-~~~~~-~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~i~~~~~~~~~~~v~lvGHSm 77 (179)
T d1ispa_ 5 VVMVHGIGG-ASFNF-AGIKSYLVSQGWSRDKLYAVDFWDKTGTNY-----NNGPVLSRFVQKVLDETGAKKVDIVAHSM 77 (179)
T ss_dssp EEEECCTTC-CGGGG-HHHHHHHHHTTCCGGGEEECCCSCTTCCHH-----HHHHHHHHHHHHHHHHHCCSCEEEEEETH
T ss_pred EEEECCCCC-CHHHH-HHHHHHHHHcCCeEEEEecCCccccccccc-----hhhhhHHHHHHHHHHhcCCceEEEEeecC
Confidence 678999965 44445 789999999999999999999998754321 23467788888888777778999999999
Q ss_pred HHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCH
Q 008093 243 GANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSI 322 (578)
Q Consensus 243 GG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~ 322 (578)
||.++..|+.+++...+|+++|++++|....... .
T Consensus 78 GG~va~~~~~~~~~~~~V~~~V~l~~p~~g~~~~-----------------------------~---------------- 112 (179)
T d1ispa_ 78 GGANTLYYIKNLDGGNKVANVVTLGGANRLTTGK-----------------------------A---------------- 112 (179)
T ss_dssp HHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCSB-----------------------------C----------------
T ss_pred cCHHHHHHHHHcCCchhhCEEEEECCCCCCchhh-----------------------------h----------------
Confidence 9999999998875433799999999885321100 0
Q ss_pred HHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccc
Q 008093 323 RDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEG 402 (578)
Q Consensus 323 ~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg 402 (578)
.. .......+|++.|+|..|.++++.. ...+..+.+.+++.||.+.+..
T Consensus 113 ----------l~---------------~~~~~~~~~~~~i~~~~D~~v~~~~------~~l~~~~~~~~~~~~H~~l~~~ 161 (179)
T d1ispa_ 113 ----------LP---------------GTDPNQKILYTSIYSSADMIVMNYL------SRLDGARNVQIHGVGHIGLLYS 161 (179)
T ss_dssp ----------CC---------------CSCTTCCCEEEEEEETTCSSSCHHH------HCCBTSEEEEESSCCTGGGGGC
T ss_pred ----------cC---------------CcccccCceEEEEEecCCcccCchh------hcCCCceEEEECCCCchhhccC
Confidence 00 0112346899999999999998642 2345667788899999988762
Q ss_pred cccCcccHHHHHHHHHHh
Q 008093 403 LTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 403 ~~~~~~w~~~~v~eFL~~ 420 (578)
+ .+.+.+.+||+.
T Consensus 162 --~---~v~~~i~~~L~~ 174 (179)
T d1ispa_ 162 --S---QVNSLIKEGLNG 174 (179)
T ss_dssp --H---HHHHHHHHHHTT
T ss_pred --H---HHHHHHHHHHhc
Confidence 2 477888998864
|
| >d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Bacterial cocaine esterase N-terminal domain species: Rhodococcus sp. mb1 [TaxId: 51612]
Probab=99.67 E-value=1.2e-16 Score=163.58 Aligned_cols=283 Identities=12% Similarity=0.066 Sum_probs=164.1
Q ss_pred EEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHH--HHHHHHHHHhCCceEEEEeCCC
Q 008093 122 RQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASY--IRHLVFNTAKRGWNVVVSNHRG 199 (578)
Q Consensus 122 r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~y--i~~l~~~l~~~Gy~Vvv~D~RG 199 (578)
...|++.||.+|+.+.+.|.+ ..+-|+||+.||+++.....+ .......++++||.|+++|.||
T Consensus 7 ~v~ipmrDGv~L~~~vy~P~~--------------~~~~P~il~~~pyg~~~~~~~~~~~~~~~~~a~~GY~vv~~d~RG 72 (347)
T d1ju3a2 7 NVMVPMRDGVRLAVDLYRPDA--------------DGPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDTRG 72 (347)
T ss_dssp EEEEECTTSCEEEEEEEEECC--------------SSCEEEEEEEESSCTTCCHHHHTTSCCTHHHHHTTCEEEEEECTT
T ss_pred CeEEECCCCCEEEEEEEEcCC--------------CCCEEEEEEEcCCCCccccCcCcccHHHHHHHHCCCEEEEEeeCC
Confidence 357999999999999998843 245799999999854333221 1223567889999999999999
Q ss_pred CCCCCCCCCCCCCCCchHHHHHHHHHHHHHC-CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHH
Q 008093 200 LGGVSITSDCFYNAGWTEDAREVIGYLHHEY-PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRF 278 (578)
Q Consensus 200 ~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~-~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~ 278 (578)
+|.|++.... .....+|..++++++.++- .+.+|.++|+|+||.+++.+|+..++ .+++++..++..|.......
T Consensus 73 ~g~S~G~~~~--~~~~~~d~~d~i~w~~~q~~~~grVg~~G~SygG~~~~~~A~~~~~--~l~aiv~~~~~~d~~~~~~~ 148 (347)
T d1ju3a2 73 LFASEGEFVP--HVDDEADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVG--GLKAIAPSMASADLYRAPWY 148 (347)
T ss_dssp STTCCSCCCT--TTTHHHHHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCT--TEEEBCEESCCSCTCCCCCS
T ss_pred ccccCCcccc--ccchhhhHHHHHHHHHhhccCCcceEeeeccccccchhhhhhcccc--cceeeeeccccchhhhhhhh
Confidence 9999875422 2234478899999998653 34589999999999999999988877 79999999988775421100
Q ss_pred -----HhhHHHHHHHHHHHHHhHHHH------------Hh--hhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCH
Q 008093 279 -----IGRRLIQKIYDRALTIGLQDY------------AQ--LHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETV 339 (578)
Q Consensus 279 -----l~~~~~~~~~~~~l~~~l~~~------------~~--~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~ 339 (578)
+.... ...+...+....... .. ......................................
T Consensus 149 ~~gg~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (347)
T d1ju3a2 149 GPGGALSVEA-LLGWSALIGTGLITSRSDARPEDAADFVQLAAILNDVAGAASVTPLAEQPLLGRLIPWVIDQVVDHPDN 227 (347)
T ss_dssp CTTCCCCHHH-HHHHHHHHHHHHHTTSSSCCTTHHHHHHHHHHHHHCHHHHHTCSSTTCCTTHHHHCTHHHHTTTTCCSC
T ss_pred hcCCccchhh-HHHHHHHhhccccccccccCcchhhHHhhhhhhcccchhhhccCccccccccccchhhHHHHhhhcccc
Confidence 00000 000000000000000 00 00000000000000000011111111111112223345
Q ss_pred HHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCcccccc-------ccc--cCcccH
Q 008093 340 DTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFE-------GLT--AAGMWW 410 (578)
Q Consensus 340 ~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~e-------g~~--~~~~w~ 410 (578)
.+|+...+....+.+|++|+|+++|..|..++.........+...+..+++-+ ++|..+.. |.. .....+
T Consensus 228 ~~~w~~~~~~~~~~~i~vP~L~i~G~~D~~~~~~~~~~~~~~~~~~~~liigp-w~H~~~~~~~~~~~~g~~~~~~~~~~ 306 (347)
T d1ju3a2 228 DESWQSISLFERLGGLATPALITAGWYDGFVGESLRTFVAVKDNADARLVVGP-WSHSNLTGRNADRKFGIAATYPIQEA 306 (347)
T ss_dssp CHHHHTTCCHHHHTTCCCCEEEEEEEECTTHHHHHHHHHHHTTTSCEEEEEEE-EESSCCSSEETTEECCGGGSCCHHHH
T ss_pred hhhhhcCCHHHHhhcCCCCEEEeccccCCCcchhHHHHHHhhccCCceEEEcC-ccccCcccccCCCCCCccccccHHHH
Confidence 57888888888999999999999999998765432222222344455665554 46754321 000 001124
Q ss_pred HHHHHHHHHhhcCC
Q 008093 411 VRAVNEYLGVLHSS 424 (578)
Q Consensus 411 ~~~v~eFL~~~~~~ 424 (578)
.....+|++..++.
T Consensus 307 ~~~~l~wfD~~LKg 320 (347)
T d1ju3a2 307 TTMHKAFFDRHLRG 320 (347)
T ss_dssp HHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHhCC
Confidence 46678899988764
|
| >d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.64 E-value=8.4e-17 Score=157.59 Aligned_cols=240 Identities=15% Similarity=0.133 Sum_probs=139.0
Q ss_pred CCCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCC--ccHH-HHHHHHHHHhCCceEE
Q 008093 117 CFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDS--AASY-IRHLVFNTAKRGWNVV 193 (578)
Q Consensus 117 ~~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s--~~~y-i~~l~~~l~~~Gy~Vv 193 (578)
.++|+... .||..|....+.|.+.. ....-|+||++||.+++. ...| .......++++||.|+
T Consensus 2 ~v~~~~i~---~dg~~l~~~l~~P~~~~-----------~~~k~Pviv~~HGGp~~~~~~~~~~~~~~~~~la~~G~~vv 67 (258)
T d1xfda2 2 KVEYRDIE---IDDYNLPMQILKPATFT-----------DTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVV 67 (258)
T ss_dssp BCCBCCEE---ETTEEECCBEEBCSSCC-----------SSSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEE
T ss_pred ceEEEEEe---eCCeEEEEEEEECCCcC-----------CCCceeEEEEEcCCccccCcCCCcCcchHHHHHhcCCcEEE
Confidence 45554442 49999988877775421 123458999999942211 1111 1123456788999999
Q ss_pred EEeCCCCCCCCCC----CCCCCCCCchHHHHHHHHHHHHHCC--CCcEEEEEEchHHHHHHHHHhhcCCC--CCccEEEE
Q 008093 194 VSNHRGLGGVSIT----SDCFYNAGWTEDAREVIGYLHHEYP--KAPLFAIGTSIGANILVKYLGEEGEK--TPVAGAAA 265 (578)
Q Consensus 194 v~D~RG~G~S~~~----~~~~~~~~~~~Dl~~~i~~l~~~~~--~~~i~lvGhSmGG~ial~ya~~~p~~--~~V~~~Vl 265 (578)
++|+||.+..... ....+.....+|+.++++++.++.. ..+|.++|+|+||.+++.++...++. ..+.+.+.
T Consensus 68 ~~d~rGs~~~g~~~~~~~~~~~g~~~~~d~~~~i~~l~~~~~id~~ri~v~G~S~GG~~a~~~~~~~~~~~~~~~~~~~~ 147 (258)
T d1xfda2 68 KCDGRGSGFQGTKLLHEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSA 147 (258)
T ss_dssp CCCCTTCSSSHHHHHHTTTTCTTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEE
T ss_pred EeccccccccchhHhhhhhccchhHHHHHHHHhhhhhcccccccccceeccccCchHHHHHHHHhcCCcccceeeeeeec
Confidence 9999986543111 0111112235788899999987653 45799999999999998877665542 13555555
Q ss_pred EcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHh
Q 008093 266 ICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRN 345 (578)
Q Consensus 266 is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~ 345 (578)
+.+............ .. ... .+. .+. ..+..
T Consensus 148 ~~~~~~~~~~~~~~~--------~~--------~~~--~~~----~~~---------------------------~~~~~ 178 (258)
T d1xfda2 148 LSPITDFKLYASAFS--------ER--------YLG--LHG----LDN---------------------------RAYEM 178 (258)
T ss_dssp ESCCCCTTSSBHHHH--------HH--------HHC--CCS----SCC---------------------------SSTTT
T ss_pred cccceeeeccccccc--------cc--------ccc--ccc----cch---------------------------HHhhc
Confidence 554322211110000 00 000 000 000 00011
Q ss_pred CCcccccCCC-ccceEEEEeCCCCCCCCCCcc---hHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 346 CSSSTYVGNV-SIPLLCISSLDDPVCTVEAIP---WDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 346 ~s~~~~l~~I-~vPvLiI~g~dDpivp~~~~~---~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
.+....+.++ +.|+|+++|++|..+|.+... ..+.+.+.+.++.+++++||.- ... ....-+.+.+.+||++.
T Consensus 179 ~s~~~~~~~~~~~p~Li~hG~~D~~vp~~~s~~~~~~l~~~~~~~~~~~~p~~~H~~-~~~--~~~~~~~~~~~~f~~~~ 255 (258)
T d1xfda2 179 TKVAHRVSALEEQQFLIIHPTADEKIHFQHTAELITQLIRGKANYSLQIYPDESHYF-TSS--SLKQHLYRSIINFFVEC 255 (258)
T ss_dssp TCTHHHHTSCCSCEEEEEEETTCSSSCHHHHHHHHHHHHHTTCCCEEEEETTCCSSC-CCH--HHHHHHHHHHHHHHTTT
T ss_pred cchhhhhhhhhcccccccccCCCCCcCHHHHHHHHHHHHHCCCCEEEEEECCCCCCC-CCC--cCHHHHHHHHHHHHHHh
Confidence 2223333343 789999999999999876332 2244567788999999999943 221 11223558899999875
Q ss_pred c
Q 008093 422 H 422 (578)
Q Consensus 422 ~ 422 (578)
+
T Consensus 256 ~ 256 (258)
T d1xfda2 256 F 256 (258)
T ss_dssp T
T ss_pred h
Confidence 4
|
| >d2pbla1 c.69.1.2 (A:1-261) Uncharacterized protein TM1040_2492 {Silicibacter sp. tm1040 [TaxId: 292414]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Uncharacterized protein TM1040 2492 species: Silicibacter sp. tm1040 [TaxId: 292414]
Probab=99.62 E-value=1.9e-15 Score=149.11 Aligned_cols=213 Identities=14% Similarity=0.142 Sum_probs=141.1
Q ss_pred EEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCC--CCCccHHHHHHHHHHHhCCceEEEEeCCCCC
Q 008093 124 LFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLT--SDSAASYIRHLVFNTAKRGWNVVVSNHRGLG 201 (578)
Q Consensus 124 ~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~--G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G 201 (578)
-+...++..-.+|++.|.+ .+.|+||++||-. .++...| ..++..|+++||.|+.+|||..+
T Consensus 41 dv~Yg~~~~~~lDiy~P~~---------------~~~P~vv~iHGG~w~~g~~~~~-~~~a~~l~~~G~~Vv~~~YRl~p 104 (261)
T d2pbla1 41 NLSYGEGDRHKFDLFLPEG---------------TPVGLFVFVHGGYWMAFDKSSW-SHLAVGALSKGWAVAMPSYELCP 104 (261)
T ss_dssp EEESSSSTTCEEEEECCSS---------------SCSEEEEEECCSTTTSCCGGGC-GGGGHHHHHTTEEEEEECCCCTT
T ss_pred CcCCCCCcCeEEEEeccCC---------------CCCCeEEEECCCCCccCChhHh-hhHHHHHhcCCceeecccccccc
Confidence 4455566667889987643 4679999999931 2333344 56788899999999999999765
Q ss_pred CCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCC----CCCccEEEEEcCCcchhhhhH
Q 008093 202 GVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGE----KTPVAGAAAICSPWDLLIGDR 277 (578)
Q Consensus 202 ~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~----~~~V~~~Vlis~p~d~~~~~~ 277 (578)
.... ....+|+.++++++.+..+ .+|+++|||.||.+++..+..... ...+++++.+++..++.....
T Consensus 105 ~~~~-------p~~~~d~~~a~~~~~~~~~-~rI~l~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (261)
T d2pbla1 105 EVRI-------SEITQQISQAVTAAAKEID-GPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLR 176 (261)
T ss_dssp TSCH-------HHHHHHHHHHHHHHHHHSC-SCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGG
T ss_pred cccC-------chhHHHHHHHHHHHHhccc-CceEEEEcchHHHHHHHHhcCcccccchhhchhhhhccccccccchhhh
Confidence 5321 2346899999999999876 589999999999999876654322 125889999998887643210
Q ss_pred HHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCcc
Q 008093 278 FIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSI 357 (578)
Q Consensus 278 ~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~v 357 (578)
.. ....+ ....+-+...|+...+.+.+.
T Consensus 177 ~~--------~~~~~--------------------------------------------~~~~~~~~~~SP~~~~~~~~~ 204 (261)
T d2pbla1 177 TS--------MNEKF--------------------------------------------KMDADAAIAESPVEMQNRYDA 204 (261)
T ss_dssp ST--------THHHH--------------------------------------------CCCHHHHHHTCGGGCCCCCSC
T ss_pred hh--------hcccc--------------------------------------------cCCHHHHHHhCchhhcccCCC
Confidence 00 00000 000122234577788888999
Q ss_pred ceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHH
Q 008093 358 PLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAV 414 (578)
Q Consensus 358 PvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v 414 (578)
|+|+++|++|+.++.+......... +...+++++++|+..++++..+...+.+.|
T Consensus 205 P~li~~G~~D~~~~~~qs~~~~~~l--~~~~~~~~~~~HF~vi~~l~~~~~~l~~~i 259 (261)
T d2pbla1 205 KVTVWVGGAERPAFLDQAIWLVEAW--DADHVIAFEKHHFNVIEPLADPESDLVAVI 259 (261)
T ss_dssp EEEEEEETTSCHHHHHHHHHHHHHH--TCEEEEETTCCTTTTTGGGGCTTCHHHHHH
T ss_pred eEEEEEecCCCchHHHHHHHHHHHh--CCCceEeCCCCchhHHHhhcCCCcHHHHHH
Confidence 9999999999766544222212222 356778899999888876543333344433
|
| >d1dina_ c.69.1.9 (A:) Dienelactone hydrolase {Pseudomonas sp., B13 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Dienelactone hydrolase domain: Dienelactone hydrolase species: Pseudomonas sp., B13 [TaxId: 306]
Probab=99.58 E-value=9.4e-15 Score=141.12 Aligned_cols=205 Identities=14% Similarity=0.077 Sum_probs=133.6
Q ss_pred EEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCC
Q 008093 122 RQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLG 201 (578)
Q Consensus 122 r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G 201 (578)
+..++..||.++......|. +.+.|.||++||..|.. . +++.+++.++++||.|+++|+.|.+
T Consensus 5 ~v~~~~~dg~~~~a~~~~P~---------------~~~~P~vl~~h~~~G~~-~-~~~~~a~~lA~~Gy~vl~pd~~~~~ 67 (233)
T d1dina_ 5 GISIQSYDGHTFGALVGSPA---------------KAPAPVIVIAQEIFGVN-A-FMRETVSWLVDQGYAAVCPDLYARQ 67 (233)
T ss_dssp TCCEECTTSCEECEEEECCS---------------SSSEEEEEEECCTTBSC-H-HHHHHHHHHHHTTCEEEEECGGGGT
T ss_pred EEEEEcCCCCEEEEEEECCC---------------CCCceEEEEeCCCCCCC-H-HHHHHHHHHHhcCCcceeeeeccCC
Confidence 34577899999986554442 24679999999875533 3 3588899999999999999998765
Q ss_pred CCCCCCCCCC---------------CCCchHHHHHHHHHHHHHC-CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEE
Q 008093 202 GVSITSDCFY---------------NAGWTEDAREVIGYLHHEY-PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAA 265 (578)
Q Consensus 202 ~S~~~~~~~~---------------~~~~~~Dl~~~i~~l~~~~-~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vl 265 (578)
.......... ......|+..+++++...- ...++.++|+|+||.+++..+... .+.++++
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~aa~~~l~~~~~~~~~i~~~G~s~Gg~~a~~~a~~~----~~~~~~~ 143 (233)
T d1dina_ 68 APGTALDPQDERQREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYCLGGALAFLVAAKG----YVDRAVG 143 (233)
T ss_dssp STTCBCCTTSHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHHHT----CSSEEEE
T ss_pred CcCcccChHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHhCCCCCCceEEEEecccccceeeccccc----ccceecc
Confidence 5432211000 0112358888888886542 345899999999999998877653 3555554
Q ss_pred EcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHh
Q 008093 266 ICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRN 345 (578)
Q Consensus 266 is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~ 345 (578)
.-+.. ..
T Consensus 144 ~~~~~-~~------------------------------------------------------------------------ 150 (233)
T d1dina_ 144 YYGVG-LE------------------------------------------------------------------------ 150 (233)
T ss_dssp ESCSC-GG------------------------------------------------------------------------
T ss_pred ccccc-cc------------------------------------------------------------------------
Confidence 32110 00
Q ss_pred CCcccccCCCccceEEEEeCCCCCCCCCCcchH--HHhcCCCEEEEEeCCCCccccccccccC--c---ccHHHHHHHHH
Q 008093 346 CSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWD--ECRANKNVVLATTWHGGHLAFFEGLTAA--G---MWWVRAVNEYL 418 (578)
Q Consensus 346 ~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~--~~~~~~~~~l~~~~~GGH~~~~eg~~~~--~---~w~~~~v~eFL 418 (578)
+....+.+|++|+|+++|++|+.+|.+..... .....++.++.++++++|.-.... .+. + ....+++++||
T Consensus 151 -~~~~~~~~i~~Pvl~~~G~~D~~vp~e~~~~~~~~~~~~~~~~~~~y~ga~HgF~~~~-~~~y~~~aa~~a~~r~~~ff 228 (233)
T d1dina_ 151 -KQLNKVPEVKHPALFHMGGQDHFVPAPSRQLITEGFGANPLLQVHWYEEAGHSFARTS-SSGYVASAAALANERTLDFL 228 (233)
T ss_dssp -GGGGGGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHTTCTTEEEEEETTCCTTTTCTT-STTCCHHHHHHHHHHHHHHH
T ss_pred -cchhhhhccCCcceeeecccccCCCHHHHHHHHHHHhcCCCEEEEEECCCCcCCCCCC-CccCCHHHHHHHHHHHHHHH
Confidence 01123446789999999999999998754432 234567889999999999532221 011 0 01236778999
Q ss_pred Hhhc
Q 008093 419 GVLH 422 (578)
Q Consensus 419 ~~~~ 422 (578)
..+.
T Consensus 229 a~~~ 232 (233)
T d1dina_ 229 APLQ 232 (233)
T ss_dssp GGGC
T ss_pred HcCc
Confidence 8763
|
| >d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Xanthomonas citri [TaxId: 346]
Probab=99.57 E-value=8.5e-15 Score=152.22 Aligned_cols=279 Identities=13% Similarity=0.084 Sum_probs=161.1
Q ss_pred eEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCC---------ccHHHHHHHHHHHhCCce
Q 008093 121 RRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDS---------AASYIRHLVFNTAKRGWN 191 (578)
Q Consensus 121 ~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s---------~~~yi~~l~~~l~~~Gy~ 191 (578)
+...|++.||.+|+.+.+.|.+ ..+-|+||+.|+++++. .........+.++++||.
T Consensus 25 ~~v~i~~rDG~~L~~~v~~P~~--------------~~~~P~il~~~pYg~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~ 90 (381)
T d1mpxa2 25 REVMIPMRDGVKLHTVIVLPKG--------------AKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYI 90 (381)
T ss_dssp EEEEEECTTSCEEEEEEEEETT--------------CCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCE
T ss_pred EEEEEECCCCCEEEEEEEEeCC--------------CCCccEEEEEccCCCCCcccccccccccccchhHHHHHHhCCCE
Confidence 4557889999999999998854 24579999999874210 011112345678999999
Q ss_pred EEEEeCCCCCCCCCCCCCC---------CCCCchHHHHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCc
Q 008093 192 VVVSNHRGLGGVSITSDCF---------YNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPV 260 (578)
Q Consensus 192 Vvv~D~RG~G~S~~~~~~~---------~~~~~~~Dl~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V 260 (578)
|+++|.||.|.|.+.-... ......+|..++++++.++- .+.+|.++|+|+||.+++.+|...++ .+
T Consensus 91 vv~~d~RG~g~S~G~~~~~~~~~~~~~~~~~~~~~D~~~~i~w~~~~~~~~~~~vg~~G~SygG~~~~~~a~~~~~--~l 168 (381)
T d1mpxa2 91 RVFQDVRGKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHP--AL 168 (381)
T ss_dssp EEEEECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCT--TE
T ss_pred EEEEecCccCCCCCceeccchhhhhcccchhHHHHHHHHHHHHHhhcCCcCccceeeecccHHHHHHHHHHhcccc--cc
Confidence 9999999999997653211 11234689999999998774 34589999999999999998988877 79
Q ss_pred cEEEEEcCCcchhhhhHH-----HhhHHHHHHHHHHHHHhHHHHHhhhcccccc---cCCHHHHhccCCHHHHHhhhhhc
Q 008093 261 AGAAAICSPWDLLIGDRF-----IGRRLIQKIYDRALTIGLQDYAQLHEPRYSR---LANWEGIKKSRSIRDFDSHATCL 332 (578)
Q Consensus 261 ~~~Vlis~p~d~~~~~~~-----l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~---~~d~~~i~~~~s~~efd~~~~~~ 332 (578)
+++|..++..|....... ............ ......+.... ..+...........+++......
T Consensus 169 ~a~v~~~~~~d~~~~~~~~~gG~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (381)
T d1mpxa2 169 KVAVPESPMIDGWMGDDWFNYGAFRQVNFDYFTGQ--------LSKRGKGAGIARQGHDDYSNFLQAGSAGDFAKAAGLE 240 (381)
T ss_dssp EEEEEESCCCCTTTTSSSEETTEEBGGGHHHHHHH--------HSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGG
T ss_pred ceeeeeccccccccccccccCchhhhccHHHHHhh--------hhhccccchhhhhhhhhHHHHHhcccccccchhhccc
Confidence 999999887765321100 000000000000 00000000000 00111111112222222111100
Q ss_pred -------cCCCCCHHHHHHhCCccc--ccCCCccceEEEEeCCCCCCCCCCcchHH-----HhcCCCEEEEEeCCCCccc
Q 008093 333 -------VGKFETVDTYYRNCSSST--YVGNVSIPLLCISSLDDPVCTVEAIPWDE-----CRANKNVVLATTWHGGHLA 398 (578)
Q Consensus 333 -------~~g~~~~~~yy~~~s~~~--~l~~I~vPvLiI~g~dDpivp~~~~~~~~-----~~~~~~~~l~~~~~GGH~~ 398 (578)
.......++|+...+... ...+|++|+|++.|..|.......+.... .....+..+++-+ .+|.+
T Consensus 241 ~~~~~~~~~~~~~~d~~w~~~s~~~~~~~~~i~vP~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~~~~~LviGP-w~H~~ 319 (381)
T d1mpxa2 241 QLPWWHKLTEHAAYDAFWQEQALDKVMARTPLKVPTMWLQGLWDQEDMWGAIHSYAAMEPRDKRNTLNYLVMGP-WRHSQ 319 (381)
T ss_dssp GSHHHHHHHHTCSSCHHHHTTCHHHHHHTSCCCSCEEEEEETTCSSCSSHHHHHHHHHGGGCTTSSSEEEEEES-CCTTG
T ss_pred cchHHHHHhhCCCccchhhhcCchhhhhhccccCceEEEeccccCCccccHHHHHHHHHHhccccCCceEEEec-CcCCC
Confidence 000122346666655544 34679999999999888776654332211 1223556777766 47876
Q ss_pred cccccc--------cC--cccHHHHHHHHHHhhcCC
Q 008093 399 FFEGLT--------AA--GMWWVRAVNEYLGVLHSS 424 (578)
Q Consensus 399 ~~eg~~--------~~--~~w~~~~v~eFL~~~~~~ 424 (578)
+..... ++ ..++.+.+.+|++..++.
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~wFD~~LKg 355 (381)
T d1mpxa2 320 VNYDGSALGALNFEGDTARQFRHDVLRPFFDQYLVD 355 (381)
T ss_dssp GGSCCSEETTEECSSCHHHHHHHHTHHHHHHHHHST
T ss_pred CccCCCcCCccccccchhhhhHHHHHHHHHHHHhCC
Confidence 532100 01 123456678899987754
|
| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.57 E-value=1.3e-14 Score=141.31 Aligned_cols=92 Identities=16% Similarity=0.087 Sum_probs=70.4
Q ss_pred CCCcEEEEECCCC---C-CCccH---HHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC
Q 008093 158 DTTPIAIVIPGLT---S-DSAAS---YIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY 230 (578)
Q Consensus 158 ~~~PiVVllHGl~---G-~s~~~---yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~ 230 (578)
+++|+||++||.+ + .+... +...++..+.+.||.|+.+|||+.+.... ....+|+.++++++.+.+
T Consensus 29 ~~~~~vv~iHGGg~~~~~~~~~~~~~~~~~l~~~~~~~g~~v~~~dYrl~p~~~~-------~~~~~d~~~~~~~l~~~~ 101 (263)
T d1vkha_ 29 NTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEITN-------PRNLYDAVSNITRLVKEK 101 (263)
T ss_dssp TCCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTSCT-------THHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEECCCCccCCCCCcchHHHHHHHHHHHHHhCCeEEEEeccccCcchhh-------hHHHHhhhhhhhcccccc
Confidence 5779999999931 1 12222 23445666678999999999998765321 135689999999999998
Q ss_pred CCCcEEEEEEchHHHHHHHHHhhcCC
Q 008093 231 PKAPLFAIGTSIGANILVKYLGEEGE 256 (578)
Q Consensus 231 ~~~~i~lvGhSmGG~ial~ya~~~p~ 256 (578)
+..+++++|||+||.+++.++...+.
T Consensus 102 ~~~~i~l~G~S~Gg~lal~~a~~~~~ 127 (263)
T d1vkha_ 102 GLTNINMVGHSVGATFIWQILAALKD 127 (263)
T ss_dssp TCCCEEEEEETHHHHHHHHHHTGGGS
T ss_pred cccceeeeccCcHHHHHHHHHHhccC
Confidence 88899999999999999998876654
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.55 E-value=2.3e-14 Score=138.12 Aligned_cols=92 Identities=12% Similarity=0.106 Sum_probs=65.3
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEE
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAI 238 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lv 238 (578)
.+| |+++||++|++ ..| +.++..| +++|+++|+||+|.++.. .+.+...++.+.+..+..+++++
T Consensus 25 ~~P-l~l~Hg~~gs~-~~~-~~l~~~L---~~~v~~~d~~g~~~~~~~---------~~~a~~~~~~~~~~~~~~~~~lv 89 (286)
T d1xkta_ 25 ERP-LFLVHPIEGST-TVF-HSLASRL---SIPTYGLQCTRAAPLDSI---------HSLAAYYIDCIRQVQPEGPYRVA 89 (286)
T ss_dssp SCC-EEEECCTTCCC-GGG-HHHHHTC---SSCEEEECCCTTSCCSCH---------HHHHHHHHHHHHHHCCSSCCEEE
T ss_pred CCe-EEEECCCCccH-HHH-HHHHHHc---CCeEEEEeCCCCCCCCCH---------HHHHHHHHHHHHHhcCCCceEEe
Confidence 345 78999997655 456 6777766 689999999999986421 12233455666777788899999
Q ss_pred EEchHHHHHHHHHhhcCCCCCccEEEEEc
Q 008093 239 GTSIGANILVKYLGEEGEKTPVAGAAAIC 267 (578)
Q Consensus 239 GhSmGG~ial~ya~~~p~~~~V~~~Vlis 267 (578)
||||||.+++.+|.++|+ ++.+++.++
T Consensus 90 GhS~Gg~vA~~~A~~~p~--~~~~v~~l~ 116 (286)
T d1xkta_ 90 GYSYGACVAFEMCSQLQA--QQSPAPTHN 116 (286)
T ss_dssp EETHHHHHHHHHHHHHHH--C------CC
T ss_pred ecCCccHHHHHHHHHHHH--cCCCceeEE
Confidence 999999999999999987 555554443
|
| >d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG species: Acremonium chrysogenum [TaxId: 5044]
Probab=99.51 E-value=1.7e-13 Score=141.21 Aligned_cols=136 Identities=16% Similarity=0.081 Sum_probs=90.3
Q ss_pred EEEecCCcEEE-EEEecC--CCCCCCccccccccCCCCCCcEEEEECCCCCCCcc-HHHHHHH---HHHHhCCceEEEEe
Q 008093 124 LFRLSDGGMIA-LDWLMG--STGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAA-SYIRHLV---FNTAKRGWNVVVSN 196 (578)
Q Consensus 124 ~l~~~DG~~i~-ldw~~~--~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~-~yi~~l~---~~l~~~Gy~Vvv~D 196 (578)
.|++..|+++. +..... ... +....++||++|+++|++.. .|+..++ +.+--..|-|+++|
T Consensus 17 ~F~le~G~~l~~~~laY~t~G~l------------n~~~~NaVlv~h~ltg~~~~~~WW~~liG~g~alDt~kyfVI~~n 84 (376)
T d2vata1 17 LFTLESGVILRDVPVAYKSWGRM------------NVSRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLN 84 (376)
T ss_dssp EEECTTSCEEEEEEEEEEEESCC------------CTTSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEEC
T ss_pred cEEeCCCCCcCCceEEEEeeccc------------CCCCCCEEEEcCCCcCCccccccHHHhCCCCCccCccceEEEEec
Confidence 57788898872 333221 111 12446789999999998874 2223232 22333569999999
Q ss_pred CCCCCCC--CCCCCCC-------CC----CCchHHHHHHHHHHHHHCCCCcE-EEEEEchHHHHHHHHHhhcCCCCCccE
Q 008093 197 HRGLGGV--SITSDCF-------YN----AGWTEDAREVIGYLHHEYPKAPL-FAIGTSIGANILVKYLGEEGEKTPVAG 262 (578)
Q Consensus 197 ~RG~G~S--~~~~~~~-------~~----~~~~~Dl~~~i~~l~~~~~~~~i-~lvGhSmGG~ial~ya~~~p~~~~V~~ 262 (578)
..|.|.+ ...++.. |. .--..|+..+-..+.+..+-+++ .++|.||||+.++.+|..+|+ .|..
T Consensus 85 ~lG~~~gst~p~s~~p~~~~~~~yg~~FP~~ti~D~v~aq~~ll~~LGI~~l~aViG~SmGGmqal~wa~~~Pd--~v~~ 162 (376)
T d2vata1 85 YLGSPFGSAGPCSPDPDAEGQRPYGAKFPRTTIRDDVRIHRQVLDRLGVRQIAAVVGASMGGMHTLEWAFFGPE--YVRK 162 (376)
T ss_dssp CTTCSSSSSSTTSBCTTTC--CBCGGGCCCCCHHHHHHHHHHHHHHHTCCCEEEEEEETHHHHHHHHHGGGCTT--TBCC
T ss_pred cCCCCcCCCCCCCCCcccccCCcccccCCcchhHHHHHHHHHHHHHhCcceEEEeecccHHHHHHHHHHHhchH--HHhh
Confidence 9996532 2211111 11 11236777766666677777776 688999999999999999999 8999
Q ss_pred EEEEcCCcchh
Q 008093 263 AAAICSPWDLL 273 (578)
Q Consensus 263 ~Vlis~p~d~~ 273 (578)
+|.||+.....
T Consensus 163 li~Ia~~~~~s 173 (376)
T d2vata1 163 IVPIATSCRQS 173 (376)
T ss_dssp EEEESCCSBCC
T ss_pred hcccccccccc
Confidence 99999877543
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Probab=99.50 E-value=2.8e-17 Score=163.70 Aligned_cols=240 Identities=9% Similarity=-0.085 Sum_probs=117.3
Q ss_pred CcEEEEECCCCCCCccHHH------HHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCC
Q 008093 160 TPIAIVIPGLTSDSAASYI------RHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKA 233 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi------~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~ 233 (578)
+++|||+||+++++. .|. ..++..++++||+|+++|+||||.|...........+.+|+.+.++.+.. ...
T Consensus 58 ~~PvvllHG~~~~~~-~w~~~~~~~~~~~~~~~~~Gy~V~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~~~--~~~ 134 (318)
T d1qlwa_ 58 RYPITLIHGCCLTGM-TWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKLGKAPASSLPDLFA--AGH 134 (318)
T ss_dssp SSCEEEECCTTCCGG-GGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHHHHTTSSCGGGSCCCBC--CCH
T ss_pred CCcEEEECCCCCCcC-ccccCcccchhHHHHHHhCCCEEEEecCCCCCCCCCccccCCHHHHHHHHHHHHHHHhh--ccc
Confidence 444788999965444 331 13577889999999999999999996542211111112222222222211 123
Q ss_pred cEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCH
Q 008093 234 PLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANW 313 (578)
Q Consensus 234 ~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~ 313 (578)
+..++||||||.++..++...... .....++.+.......... ... ........ .+.................
T Consensus 135 ~~~~~g~s~G~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 207 (318)
T d1qlwa_ 135 EAAWAIFRFGPRYPDAFKDTQFPV-QAQAELWQQMVPDWLGSMP-TPN-PTVANLSK----LAIKLDGTVLLSHSQSGIY 207 (318)
T ss_dssp HHHHHHTTSSSBTTBCCTTCCSCG-GGHHHHHHHCCCBCGGGSC-SSC-HHHHHHHH----HHHHHTSEEEEEEGGGTTH
T ss_pred ccccccccchhHHHHHHhhhcCcc-ccceeeEeccccccccchh-hhh-hhHHHHHH----HHhhhccccchhhhcccch
Confidence 567789999999988777655431 1111111111111100000 000 00000000 0000000000000000000
Q ss_pred HHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcc--------hHHHhcCCC
Q 008093 314 EGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIP--------WDECRANKN 385 (578)
Q Consensus 314 ~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~--------~~~~~~~~~ 385 (578)
...... ...+.+... ..+.. +........+..+++|+|+++|++|+++|..... ....+...+
T Consensus 208 ~~~~~~----~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~P~Lii~G~~D~~~p~~~~~~~~~~~~~~~l~~~g~~ 278 (318)
T d1qlwa_ 208 PFQTAA----MNPKGITAI-VSVEP----GECPKPEDVKPLTSIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAAGGK 278 (318)
T ss_dssp HHHHHH----HCCTTEEEE-EEESC----SCCCCGGGCGGGTTSCEEEEECSSCTTCTTTHHHHHHHHHHHHHHHHTTCC
T ss_pred hhhhhh----hhhhHHHHH-Hhhhc----ccccchhhhhhhccCCEEEEecCcCcccChhhhHHHHHHHHHHHHHHhCCC
Confidence 000000 000000000 00000 0011234566778999999999999999975321 113345678
Q ss_pred EEEEEeC-----CCCccccccccccCcccHHHHHHHHHHhh
Q 008093 386 VVLATTW-----HGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 386 ~~l~~~~-----~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
++++.++ ++||+.+.| .+...+.+.|.+||++.
T Consensus 279 ~~~~~lp~~gi~G~gH~~~~e---~~~~~va~~i~~wL~~~ 316 (318)
T d1qlwa_ 279 GQLMSLPALGVHGNSHMMMQD---RNNLQVADLILDWIGRN 316 (318)
T ss_dssp EEEEEGGGGTCCCCCTTGGGS---TTHHHHHHHHHHHHHHT
T ss_pred cEEEEecccccCCCcCccccC---cCHHHHHHHHHHHHHhc
Confidence 8998866 567999998 33346889999999863
|
| >d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Bacillus cereus [TaxId: 1396]
Probab=99.49 E-value=3.3e-13 Score=126.32 Aligned_cols=177 Identities=18% Similarity=0.123 Sum_probs=115.7
Q ss_pred CCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCC--C-------chHHHHHHHHHHH
Q 008093 157 DDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNA--G-------WTEDAREVIGYLH 227 (578)
Q Consensus 157 ~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~--~-------~~~Dl~~~i~~l~ 227 (578)
++++|+||++||++|+ ...| ..+++.+. .++.|++++.+..+............ . ..+++..+++.+.
T Consensus 11 ~~~~P~vi~lHG~g~~-~~~~-~~~~~~l~-~~~~vv~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 87 (202)
T d2h1ia1 11 DTSKPVLLLLHGTGGN-ELDL-LPLAEIVD-SEASVLSVRGNVLENGMPRFFRRLAEGIFDEEDLIFRTKELNEFLDEAA 87 (202)
T ss_dssp CTTSCEEEEECCTTCC-TTTT-HHHHHHHH-TTSCEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCC-HHHH-HHHHHHhc-cCCceeeecccccCCCCccccccCCCCCCchHHHHHHHHHHHHHHHHHH
Confidence 4678999999999554 4444 56777776 48999998754433221110100000 1 1245666666666
Q ss_pred HHCC--CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcc
Q 008093 228 HEYP--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEP 305 (578)
Q Consensus 228 ~~~~--~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~ 305 (578)
+++. ..+++++|+|+||.+++.++..+++ .+.+++++++.....
T Consensus 88 ~~~~~d~~~i~~~G~S~Gg~~a~~la~~~~~--~~~~~~~~~~~~~~~-------------------------------- 133 (202)
T d2h1ia1 88 KEYKFDRNNIVAIGYSNGANIAASLLFHYEN--ALKGAVLHHPMVPRR-------------------------------- 133 (202)
T ss_dssp HHTTCCTTCEEEEEETHHHHHHHHHHHHCTT--SCSEEEEESCCCSCS--------------------------------
T ss_pred HhccccccceeeecccccchHHHHHHHhccc--cccceeeecCCCCcc--------------------------------
Confidence 6654 5689999999999999999999998 788888776432110
Q ss_pred cccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcch---HHHhc
Q 008093 306 RYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPW---DECRA 382 (578)
Q Consensus 306 ~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~---~~~~~ 382 (578)
..........|+++++|++|++||.+.... .+...
T Consensus 134 ------------------------------------------~~~~~~~~~~~~~i~~G~~D~~vp~~~~~~~~~~l~~~ 171 (202)
T d2h1ia1 134 ------------------------------------------GMQLANLAGKSVFIAAGTNDPICSSAESEELKVLLENA 171 (202)
T ss_dssp ------------------------------------------SCCCCCCTTCEEEEEEESSCSSSCHHHHHHHHHHHHTT
T ss_pred ------------------------------------------cccccccccchhhcccccCCCccCHHHHHHHHHHHHHC
Confidence 011223456899999999999999874332 23344
Q ss_pred CCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 383 NKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 383 ~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
+-++++..++ |||-.-. ...+.+.+||++.
T Consensus 172 g~~~~~~~~~-ggH~~~~--------~~~~~~~~wl~k~ 201 (202)
T d2h1ia1 172 NANVTMHWEN-RGHQLTM--------GEVEKAKEWYDKA 201 (202)
T ss_dssp TCEEEEEEES-STTSCCH--------HHHHHHHHHHHHH
T ss_pred CCCEEEEEEC-CCCcCCH--------HHHHHHHHHHHHh
Confidence 5578888887 5894311 2457889998763
|
| >d1fj2a_ c.69.1.14 (A:) Acyl protein thioesterase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Acyl protein thioesterase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.49 E-value=3.3e-13 Score=129.72 Aligned_cols=184 Identities=14% Similarity=0.062 Sum_probs=113.2
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCC--------CCCCCC---CCCCCchH-------HH
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGV--------SITSDC---FYNAGWTE-------DA 219 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S--------~~~~~~---~~~~~~~~-------Dl 219 (578)
+.+++||++||++ ++...| ..+...+...++.+++++-+.+... ..-... .......+ .+
T Consensus 19 ~~~~~VI~lHG~G-~~~~~~-~~~~~~l~~~~~~~v~p~Ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~i~~~~~~l 96 (229)
T d1fj2a_ 19 KATAAVIFLHGLG-DTGHGW-AEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPDSQEDESGIKQAAENI 96 (229)
T ss_dssp CCSEEEEEECCSS-SCHHHH-HHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCCSTTCCBCHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCC-CCHHHH-HHHHHHhcCCCCEEEeCCCCCCccccCCCcccccccccccccccchhhhHHHHHHHHHH
Confidence 4567899999994 455555 5566667778899999875432110 000000 00001112 23
Q ss_pred HHHHHHHHHH-CCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHH
Q 008093 220 REVIGYLHHE-YPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQD 298 (578)
Q Consensus 220 ~~~i~~l~~~-~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~ 298 (578)
..+++...+. .+..+++++|+|+||.+++.++..+++ +++|++++++......
T Consensus 97 ~~li~~~~~~~i~~~ri~l~GfS~Gg~~a~~~~~~~~~--~~~gvi~~sg~lp~~~------------------------ 150 (229)
T d1fj2a_ 97 KALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQ--KLAGVTALSCWLPLRA------------------------ 150 (229)
T ss_dssp HHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHTTCSS--CCSEEEEESCCCTTGG------------------------
T ss_pred HHHhhhhhhcCCCccceeeeecccchHHHHHHHHhhcc--ccCccccccccccccc------------------------
Confidence 3334433332 256789999999999999999999988 8999998875321100
Q ss_pred HHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcch-
Q 008093 299 YAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPW- 377 (578)
Q Consensus 299 ~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~- 377 (578)
.+.. ......+.++|+|++||.+|+++|.+....
T Consensus 151 -------~~~~--------------------------------------~~~~~~~~~~Pvli~hG~~D~~vp~~~~~~~ 185 (229)
T d1fj2a_ 151 -------SFPQ--------------------------------------GPIGGANRDISILQCHGDCDPLVPLMFGSLT 185 (229)
T ss_dssp -------GSCS--------------------------------------SCCCSTTTTCCEEEEEETTCSSSCHHHHHHH
T ss_pred -------cccc--------------------------------------cccccccccCceeEEEcCCCCeeCHHHHHHH
Confidence 0000 000111236899999999999999874332
Q ss_pred --HHHh--cCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhc
Q 008093 378 --DECR--ANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 378 --~~~~--~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~ 422 (578)
.+.. ...++++.+++++||-.-.+ ..+.+.+||++.+
T Consensus 186 ~~~L~~~~~~~~v~~~~~~g~gH~i~~~--------~~~~~~~wL~~~L 226 (229)
T d1fj2a_ 186 VEKLKTLVNPANVTFKTYEGMMHSSCQQ--------EMMDVKQFIDKLL 226 (229)
T ss_dssp HHHHHHHSCGGGEEEEEETTCCSSCCHH--------HHHHHHHHHHHHS
T ss_pred HHHHHhcCCCCceEEEEeCCCCCccCHH--------HHHHHHHHHHhHC
Confidence 1222 24578999999999943222 4567899999875
|
| >d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Haemophilus influenzae [TaxId: 727]
Probab=99.49 E-value=4.8e-13 Score=136.85 Aligned_cols=255 Identities=12% Similarity=0.018 Sum_probs=138.7
Q ss_pred CCCcEEEEECCCCCCCccH-------HHHHHH---HHHHhCCceEEEEeCCCCCCC-CCC-CCC-----CC----CCCch
Q 008093 158 DTTPIAIVIPGLTSDSAAS-------YIRHLV---FNTAKRGWNVVVSNHRGLGGV-SIT-SDC-----FY----NAGWT 216 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~-------yi~~l~---~~l~~~Gy~Vvv~D~RG~G~S-~~~-~~~-----~~----~~~~~ 216 (578)
...++||++|+++|++... |+..++ ..+-...|.|+++|..|.|.+ ..+ +.. .| ..--.
T Consensus 37 ~~~NaVlv~h~~tg~~~~~~~~~~~gWW~~liG~g~alDt~kyfVI~~n~lG~~~gSs~p~s~~p~tg~~~g~~FP~iti 116 (357)
T d2b61a1 37 EKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSINPQTGKPYGSQFPNIVV 116 (357)
T ss_dssp TCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTSBCTTTSSBCGGGCCCCCH
T ss_pred CCCCEEEEcCCCCccccccccCCCCCcHHHhcCCCCccCCCceEEEEecccCCccccCCcCCCCCCCCCCCCcccccchh
Confidence 3457899999999987641 223332 223335699999999996542 222 111 11 11124
Q ss_pred HHHHHHHHHHHHHCCCCcE-EEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHH-------
Q 008093 217 EDAREVIGYLHHEYPKAPL-FAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIY------- 288 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~~~~i-~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~------- 288 (578)
.|+..+...+.+..+-+++ .++|.||||++++.++..+|+ .+..+|.||+..........+.......+.
T Consensus 117 ~D~v~aq~~Ll~~LGI~~l~~viG~SmGGmqAl~wa~~~Pd--~v~~~i~i~~~a~~s~~~~~~~~~~~~aI~~Dp~~~~ 194 (357)
T d2b61a1 117 QDIVKVQKALLEHLGISHLKAIIGGSFGGMQANQWAIDYPD--FMDNIVNLCSSIYFSAEAIGFNHVMRQAVINDPNFNG 194 (357)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHSTT--SEEEEEEESCCSSCCHHHHHHHHHHHHHHHTSTTCGG
T ss_pred HHHHHHHHHHHHHhCcceEEEEecccHHHHHHHHHHHhhhH--HHhhhcccccccccchhHHHHHHHHHHHHHcCCCCCC
Confidence 6877777777788888887 667999999999999999999 899999999875433221111100000000
Q ss_pred -----------HHHHHHhHH--H------HHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHh----
Q 008093 289 -----------DRALTIGLQ--D------YAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRN---- 345 (578)
Q Consensus 289 -----------~~~l~~~l~--~------~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~---- 345 (578)
...++..+. . +..+.........+ .......+..+.++...+...--+...|...
T Consensus 195 G~Y~~~~~p~~GL~~Ar~~a~~ty~s~~~~~~~f~r~~~~~~~--~~~~~~~vesyL~~~g~kf~~rfDan~yl~l~~a~ 272 (357)
T d2b61a1 195 GDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGS--FWGDYFQVESYLSYQGKKFLERFDANSYLHLLRAL 272 (357)
T ss_dssp GCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCC--TTSCCBHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred CCcccCCCchhHHHHHHHHHHhhccCHHHHHHHhccccccccc--cccchhhHHHHHHHHHHHHHhhCCHHHHHHHHHHh
Confidence 000000000 0 00000000000000 0000000111111100000000122222211
Q ss_pred --C-------CcccccCCCccceEEEEeCCCCCCCCCCcch---HHHhcCCCEEEEEeCC-CCccccccccccCcccHHH
Q 008093 346 --C-------SSSTYVGNVSIPLLCISSLDDPVCTVEAIPW---DECRANKNVVLATTWH-GGHLAFFEGLTAAGMWWVR 412 (578)
Q Consensus 346 --~-------s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~---~~~~~~~~~~l~~~~~-GGH~~~~eg~~~~~~w~~~ 412 (578)
. +....+++|++|+|+|....|-+.|++.... .+.....++++.+++. -||.+|+-+ ...+.+
T Consensus 273 ~~~D~~~~~~~l~~aL~~I~a~vLvi~~~sD~lFpp~~~~~~a~~l~~~~~~v~~~~I~S~~GHdafL~e----~~~~~~ 348 (357)
T d2b61a1 273 DMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSGVDLHFYEFPSDYGHDAFLVD----YDQFEK 348 (357)
T ss_dssp HHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEECCTTGGGHHHHC----HHHHHH
T ss_pred hhcccccccccHHHHHhhcCCCEEEEEeCCccccCHHHHHHHHHHHHhcCCCeEEEEECCCCCccccCcC----HHHHHH
Confidence 1 1123478999999999999999999874332 2233456788888875 499998762 336889
Q ss_pred HHHHHHHh
Q 008093 413 AVNEYLGV 420 (578)
Q Consensus 413 ~v~eFL~~ 420 (578)
.|.+||+.
T Consensus 349 ~I~~fL~~ 356 (357)
T d2b61a1 349 RIRDGLAG 356 (357)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHcc
Confidence 99999874
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Probab=99.45 E-value=6.3e-13 Score=133.80 Aligned_cols=106 Identities=13% Similarity=-0.010 Sum_probs=87.3
Q ss_pred cEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEE
Q 008093 161 PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGT 240 (578)
Q Consensus 161 PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGh 240 (578)
+.|||+||++++....|...+++.|.+.||+|+.+|+||+|.++.. ...+++.+.++++.+..+..++.+|||
T Consensus 32 ~PVvlvHG~~~~~~~~~~~~~~~~L~~~Gy~v~~~d~~g~g~~d~~-------~sae~la~~i~~v~~~~g~~kV~lVGh 104 (317)
T d1tcaa_ 32 KPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLNDTQ-------VNTEYMVNAITALYAGSGNNKLPVLTW 104 (317)
T ss_dssp SEEEEECCTTCCHHHHHTTTHHHHHHTTTCEEEEECCTTTTCSCHH-------HHHHHHHHHHHHHHHHTTSCCEEEEEE
T ss_pred CcEEEECCCCCCCcchhHHHHHHHHHhCCCeEEEecCCCCCCCchH-------hHHHHHHHHHHHHHHhccCCceEEEEe
Confidence 4478999996555555546789999999999999999999876422 235789999999999988889999999
Q ss_pred chHHHHHHHHHhhcCCC-CCccEEEEEcCCcchh
Q 008093 241 SIGANILVKYLGEEGEK-TPVAGAAAICSPWDLL 273 (578)
Q Consensus 241 SmGG~ial~ya~~~p~~-~~V~~~Vlis~p~d~~ 273 (578)
||||.++..++..+|+. ..|..+|.+++++...
T Consensus 105 S~GG~~a~~~l~~~p~~~~~V~~~v~i~~~~~Gt 138 (317)
T d1tcaa_ 105 SQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGT 138 (317)
T ss_dssp THHHHHHHHHHHHCGGGTTTEEEEEEESCCTTCB
T ss_pred CchHHHHHHHHHHCCCcchheeEEEEeCCCCCCc
Confidence 99999999999988752 3799999999987654
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Probab=99.45 E-value=3.6e-13 Score=140.87 Aligned_cols=223 Identities=12% Similarity=-0.021 Sum_probs=135.4
Q ss_pred HHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC----------------CCCcEEEEEEchHH
Q 008093 181 LVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY----------------PKAPLFAIGTSIGA 244 (578)
Q Consensus 181 l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~----------------~~~~i~lvGhSmGG 244 (578)
....++++||.|+.+|.||.|+|++.. ..+.....+|..++|+++..+. .+.+|.++|+|+||
T Consensus 128 ~~~~~~~~GYavv~~D~RG~g~S~G~~-~~~~~~e~~D~~~~IeWl~~~~~~~~~~~~~~~~~q~WsnGkVGm~G~SY~G 206 (405)
T d1lnsa3 128 LNDYFLTRGFASIYVAGVGTRSSDGFQ-TSGDYQQIYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSYLG 206 (405)
T ss_dssp HHHHHHTTTCEEEEECCTTSTTSCSCC-CTTSHHHHHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETHHH
T ss_pred chHHHHhCCCEEEEECCCCCCCCCCcc-ccCChhhhhhHHHHHHHHHhcccccccccccccccccccCCeeEEEecCHHH
Confidence 446789999999999999999998753 2333345689999999997532 23479999999999
Q ss_pred HHHHHHHhhcCCCCCccEEEEEcCCcchhhhhH--------HHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHH
Q 008093 245 NILVKYLGEEGEKTPVAGAAAICSPWDLLIGDR--------FIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGI 316 (578)
Q Consensus 245 ~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~--------~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i 316 (578)
.+.+..|...++ .++++|..++..|...... ............... ... ..+....
T Consensus 207 ~~q~~aA~~~pp--~LkAivp~~~~~d~y~~~~~~G~~~~~~~~~~~~~~~~~~~~--------~~~------~~~~~~~ 270 (405)
T d1lnsa3 207 TMAYGAATTGVE--GLELILAEAGISSWYNYYRENGLVRSPGGFPGEDLDVLAALT--------YSR------NLDGADF 270 (405)
T ss_dssp HHHHHHHTTTCT--TEEEEEEESCCSBHHHHHBSSSSBCCCTTCTTCCHHHHHHHH--------CGG------GGSHHHH
T ss_pred HHHHHHHhcCCc--cceEEEecCccccHHHHhhcCCccccccchhhhhhhhhhccc--------ccc------ccccchh
Confidence 999999998887 7999999998887642100 000000000000000 000 0000000
Q ss_pred hccCC--HHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCC-CcchHHH-hcCCCEEEEEeC
Q 008093 317 KKSRS--IRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVE-AIPWDEC-RANKNVVLATTW 392 (578)
Q Consensus 317 ~~~~s--~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~-~~~~~~~-~~~~~~~l~~~~ 392 (578)
..... ...................+|++..+....+++|++|+|+++|..|..++.. ....... +......+++.+
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~w~~~s~~~~~~~I~vP~L~i~Gw~D~~v~~~~~~~~y~al~~~~~~~Lilgp 350 (405)
T d1lnsa3 271 LKGNAEYEKRLAEMTAALDRKSGDYNQFWHDRNYLINTDKVKADVLIVHGLQDWNVTPEQAYNFWKALPEGHAKHAFLHR 350 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTTCCCCHHHHTTBGGGGGGGCCSEEEEEEETTCCSSCTHHHHHHHHHSCTTCCEEEEEES
T ss_pred hhchhhhhhccchhhhhhhhccccchhhhhhcChhhhhhcCCCCEEEEEeccCCCCCHHHHHHHHHHHHhCCCcEEEEeC
Confidence 00000 0000000000111123345788888888999999999999999999998765 3333222 223446666655
Q ss_pred CCCccccccccccCcccHHHHHHHHHHhhcCC
Q 008093 393 HGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSS 424 (578)
Q Consensus 393 ~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~~ 424 (578)
++|+..... + ..-+.+.+.+|++..++.
T Consensus 351 -w~H~~~~~~--~-~~d~~~~~~~wFD~~LkG 378 (405)
T d1lnsa3 351 -GAHIYMNSW--Q-SIDFSETINAYFVAKLLD 378 (405)
T ss_dssp -CSSCCCTTB--S-SCCHHHHHHHHHHHHHTT
T ss_pred -CCCCCCccc--c-cchHHHHHHHHHHHHhCC
Confidence 689765432 1 224677888899988754
|
| >d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Acetobacter pasteurianus [TaxId: 438]
Probab=99.43 E-value=3.9e-13 Score=139.57 Aligned_cols=136 Identities=15% Similarity=0.087 Sum_probs=101.4
Q ss_pred EEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCC----------CccHHHHHHHHHHHhCCce
Q 008093 122 RQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSD----------SAASYIRHLVFNTAKRGWN 191 (578)
Q Consensus 122 r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~----------s~~~yi~~l~~~l~~~Gy~ 191 (578)
...|++.||.+|+.+.+.|.+ ..+.|+||+.|++... ............++++||.
T Consensus 30 ~v~ipmrDG~~L~~~v~~P~~--------------~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~ 95 (385)
T d2b9va2 30 EVMVPMRDGVKLYTVIVIPKN--------------ARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYI 95 (385)
T ss_dssp EEEEECTTSCEEEEEEEEETT--------------CCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCE
T ss_pred EEEEECCCCCEEEEEEEEcCC--------------CCceeEEEEEccCCCCCccccCCcccccccccchHHHHHHhCCcE
Confidence 446899999999999998854 2467888888866210 0111112345678999999
Q ss_pred EEEEeCCCCCCCCCCCCCC---------CCCCchHHHHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCc
Q 008093 192 VVVSNHRGLGGVSITSDCF---------YNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPV 260 (578)
Q Consensus 192 Vvv~D~RG~G~S~~~~~~~---------~~~~~~~Dl~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V 260 (578)
|+++|.||.|.|.+.-... +.....+|..++++++.++. .+.+|.++|+|+||.+++.+|...++ .+
T Consensus 96 vv~~d~RG~g~S~G~~~~~~~~~~~~~~~~~~e~~D~~~~i~w~~~q~~~~~g~vg~~G~SygG~~~~~~a~~~~~--~l 173 (385)
T d2b9va2 96 RVFQDIRGKYGSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHP--AL 173 (385)
T ss_dssp EEEEECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCT--TE
T ss_pred EEEEcCCcccCCCCceeeccccccccccchhhHHHHHHHHHHHHHhccCccccceeeccccHHHHHHHHHHhccCC--cc
Confidence 9999999999997643211 12235689999999998764 34589999999999999999988877 78
Q ss_pred cEEEEEcCCcchh
Q 008093 261 AGAAAICSPWDLL 273 (578)
Q Consensus 261 ~~~Vlis~p~d~~ 273 (578)
++++..++..+..
T Consensus 174 ~a~~~~~~~~d~~ 186 (385)
T d2b9va2 174 KVAAPESPMVDGW 186 (385)
T ss_dssp EEEEEEEECCCTT
T ss_pred eEEEEeccccccc
Confidence 8988888766543
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Probab=99.43 E-value=9.3e-13 Score=124.55 Aligned_cols=175 Identities=15% Similarity=-0.006 Sum_probs=112.5
Q ss_pred CCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCC--CC---CCCCCCCCCC-C---CchHHHHHHHHHHH
Q 008093 157 DDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGL--GG---VSITSDCFYN-A---GWTEDAREVIGYLH 227 (578)
Q Consensus 157 ~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~--G~---S~~~~~~~~~-~---~~~~Dl~~~i~~l~ 227 (578)
.+++|+||++||++|+.. .| ..+++.+.+ ++.+++++.+.- |. ........+. . ...+++.++|+.+.
T Consensus 20 ~~~~p~vv~lHG~g~~~~-~~-~~l~~~l~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 96 (209)
T d3b5ea1 20 KESRECLFLLHGSGVDET-TL-VPLARRIAP-TATLVAARGRIPQEDGFRWFERIDPTRFEQKSILAETAAFAAFTNEAA 96 (209)
T ss_dssp SSCCCEEEEECCTTBCTT-TT-HHHHHHHCT-TSEEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEcCCCCCHH-HH-HHHHHHhcc-CcEEEeeccCcCcccCccccccCCccccchhhHHHHHHHHHHHHHHHH
Confidence 467899999999965444 34 577787765 788888865421 11 0000000000 0 11244555666666
Q ss_pred HHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcc
Q 008093 228 HEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEP 305 (578)
Q Consensus 228 ~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~ 305 (578)
+++ +..+++++||||||.+++.++..+|+ .+++++++++.....
T Consensus 97 ~~~~id~~ri~l~G~S~Gg~~a~~~a~~~p~--~~~~~v~~~g~~~~~-------------------------------- 142 (209)
T d3b5ea1 97 KRHGLNLDHATFLGYSNGANLVSSLMLLHPG--IVRLAALLRPMPVLD-------------------------------- 142 (209)
T ss_dssp HHHTCCGGGEEEEEETHHHHHHHHHHHHSTT--SCSEEEEESCCCCCS--------------------------------
T ss_pred HHhCcccCCEEEEeeCChHHHHHHHHHhCCC--cceEEEEeCCccccc--------------------------------
Confidence 554 45689999999999999999999998 899999887632110
Q ss_pred cccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcc--hHHHhcC
Q 008093 306 RYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIP--WDECRAN 383 (578)
Q Consensus 306 ~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~--~~~~~~~ 383 (578)
........++|+++++|++|++++..... ..+....
T Consensus 143 ------------------------------------------~~~~~~~~~~p~~~~~G~~D~~~~~~~~~~~~~l~~~G 180 (209)
T d3b5ea1 143 ------------------------------------------HVPATDLAGIRTLIIAGAADETYGPFVPALVTLLSRHG 180 (209)
T ss_dssp ------------------------------------------SCCCCCCTTCEEEEEEETTCTTTGGGHHHHHHHHHHTT
T ss_pred ------------------------------------------cccccccccchheeeeccCCCccCHHHHHHHHHHHHCC
Confidence 00111234689999999999999854222 2234556
Q ss_pred CCEEEEEeCCCCccccccccccCcccHHHHHHHHHH
Q 008093 384 KNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 384 ~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
-++++.++++ ||-.- + ...+.+.+||.
T Consensus 181 ~~v~~~~~~g-gH~i~-----~---~~~~~~~~wl~ 207 (209)
T d3b5ea1 181 AEVDARIIPS-GHDIG-----D---PDAAIVRQWLA 207 (209)
T ss_dssp CEEEEEEESC-CSCCC-----H---HHHHHHHHHHH
T ss_pred CCeEEEEECC-CCCCC-----H---HHHHHHHHHhC
Confidence 6789999875 79331 1 24567788885
|
| >d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Heroin esterase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.42 E-value=4.6e-13 Score=134.70 Aligned_cols=133 Identities=17% Similarity=0.165 Sum_probs=87.5
Q ss_pred CCCeeEEEEEecCCc-EEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCC--CCCCccHHHHHHHHHHH-hCCceE
Q 008093 117 CFSYRRQLFRLSDGG-MIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGL--TSDSAASYIRHLVFNTA-KRGWNV 192 (578)
Q Consensus 117 ~~~y~r~~l~~~DG~-~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl--~G~s~~~yi~~l~~~l~-~~Gy~V 192 (578)
.+..++..+..+||+ .+.++++.|.+. +...|+||++||- ..++...+ ..++..++ +.||.|
T Consensus 47 ~v~~~~~~~~~~~g~~~i~~~~~~P~~~-------------~~~~Pvvv~iHGGG~~~g~~~~~-~~~~~~la~~~G~~V 112 (317)
T d1lzla_ 47 GVSLRELSAPGLDGDPEVKIRFVTPDNT-------------AGPVPVLLWIHGGGFAIGTAESS-DPFCVEVARELGFAV 112 (317)
T ss_dssp TEEEEEEEECCSTTCCCEEEEEEEESSC-------------CSCEEEEEEECCSTTTSCCGGGG-HHHHHHHHHHHCCEE
T ss_pred CceEEEEEEecCCCCceEEEEEECCCCC-------------CCCCcEEEEecCccccccccccc-chHHHhHHhhcCCcc
Confidence 455566667777886 589999987541 2456899999993 12334444 34555554 569999
Q ss_pred EEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC-----CCCcEEEEEEchHHHHHHHHHhhcCC--CCCccEEEE
Q 008093 193 VVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY-----PKAPLFAIGTSIGANILVKYLGEEGE--KTPVAGAAA 265 (578)
Q Consensus 193 vv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~-----~~~~i~lvGhSmGG~ial~ya~~~p~--~~~V~~~Vl 265 (578)
+.+|||..+.... ....+|+.+++.++.... +..+|+++|+|.||++++..+....+ .......++
T Consensus 113 ~~vdYrl~pe~~~-------~~~~~d~~~~~~~~~~~~~~~g~D~~rI~l~G~SaGg~la~~~~~~~~~~~~~~~~~~~~ 185 (317)
T d1lzla_ 113 ANVEYRLAPETTF-------PGPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFL 185 (317)
T ss_dssp EEECCCCTTTSCT-------THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEE
T ss_pred ccccccccccccc-------cccccccccchhHHHHHHHHhCCCHHHEEEEEeccccHHHHHHHhhhhhccccccccccc
Confidence 9999998765322 234678888888886532 23579999999999999877654321 113344444
Q ss_pred EcCCc
Q 008093 266 ICSPW 270 (578)
Q Consensus 266 is~p~ 270 (578)
.....
T Consensus 186 ~~~~~ 190 (317)
T d1lzla_ 186 EIPEL 190 (317)
T ss_dssp ESCCC
T ss_pred ccccc
Confidence 44443
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.41 E-value=5.9e-12 Score=122.95 Aligned_cols=210 Identities=14% Similarity=0.064 Sum_probs=124.4
Q ss_pred CCCcEEEEECCC-CCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHH-HHHHHHHHCCCCcE
Q 008093 158 DTTPIAIVIPGL-TSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDARE-VIGYLHHEYPKAPL 235 (578)
Q Consensus 158 ~~~PiVVllHGl-~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~-~i~~l~~~~~~~~i 235 (578)
..+|.++++||+ .|++...| ..++..|.. .+.|+++|++|+|.++.... ..+++.+ +++.|....+..|+
T Consensus 40 ~~~~~l~c~~~~~~gg~~~~y-~~La~~L~~-~~~V~al~~pG~~~~e~~~~------s~~~~a~~~~~~i~~~~~~~P~ 111 (255)
T d1mo2a_ 40 PGEVTVICCAGTAAISGPHEF-TRLAGALRG-IAPVRAVPQPGYEEGEPLPS------SMAAVAAVQADAVIRTQGDKPF 111 (255)
T ss_dssp SCSSEEEEECCCSSSCSGGGG-HHHHHHHTT-TCCEEEECCTTSSTTCCEES------SHHHHHHHHHHHHHHTTSSSCE
T ss_pred CCCCeEEEECCCCCCCCHHHH-HHHHHhcCC-CceEEEEeCCCcCCCCCCCC------CHHHHHHHHHHHHHHhCCCCCE
Confidence 456889999996 35555667 788888865 58999999999998643211 2344444 55677777788899
Q ss_pred EEEEEchHHHHHHHHHhhc---CCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCC
Q 008093 236 FAIGTSIGANILVKYLGEE---GEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLAN 312 (578)
Q Consensus 236 ~lvGhSmGG~ial~ya~~~---p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d 312 (578)
+++||||||.++..+|.+. +. ++.++++++++....... . ...... +. ...........+
T Consensus 112 ~L~GhS~Gg~vA~e~A~~l~~~g~--~v~~lvlld~~~p~~~~~--~-----~~~~~~-~~-------~~~~~~~~~~~~ 174 (255)
T d1mo2a_ 112 VVAGHSAGALMAYALATELLDRGH--PPRGVVLIDVYPPGHQDA--M-----NAWLEE-LT-------ATLFDRETVRMD 174 (255)
T ss_dssp EEEECSTTHHHHHHHHHHHHHHTC--CCSEEEEEECSCSSHHHH--H-----HHHHHH-HH-------TTCC----CCCC
T ss_pred EEEEeCCcHHHHHHHHHhhHhcCC--CccEEEEECCCCCCCccc--h-----hhHHHH-HH-------HHhhccccccCC
Confidence 9999999999999988754 44 688999998754221110 0 000010 00 000000000011
Q ss_pred HHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeC
Q 008093 313 WEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTW 392 (578)
Q Consensus 313 ~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~ 392 (578)
...+ ..+. .+++.. .......+.+|++++.+.+|....... .+ .........++.++
T Consensus 175 ~~~l------~a~~--------------~~~~~~-~~~~~~~~~~p~l~v~a~~~~~~~~~~-~w-~~~~~~~~~~~~v~ 231 (255)
T d1mo2a_ 175 DTRL------TALG--------------AYDRLT-GQWRPRETGLPTLLVSAGEPMGPWPDD-SW-KPTWPFEHDTVAVP 231 (255)
T ss_dssp HHHH------HHHH--------------HHHHHH-HHCCCCCCCCCEEEEECCSSSSCCTTC-CC-CCCCCSSCEEEECC
T ss_pred HHHH------HHHH--------------HHHHHH-hcCCCccccceEEEeecCCCCCcchhh-HH-HHhCCCCcEEEEEC
Confidence 1110 0111 111100 011235689999999999886544332 22 22234567777777
Q ss_pred CCCccccccccccCcccHHHHHHHHHH
Q 008093 393 HGGHLAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 393 ~GGH~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
|+|+.+++ +....+.+.|.+||.
T Consensus 232 -G~H~~ml~---~~~~~~A~~i~~~L~ 254 (255)
T d1mo2a_ 232 -GDHFTMVQ---EHADAIARHIDAWLG 254 (255)
T ss_dssp -SCCSSCSS---CCHHHHHHHHHHHHT
T ss_pred -CCCccccc---ccHHHHHHHHHHHhC
Confidence 69998887 233457788888874
|
| >d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase {Leptospira interrogans [TaxId: 173]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Leptospira interrogans [TaxId: 173]
Probab=99.41 E-value=7.5e-12 Score=128.09 Aligned_cols=114 Identities=14% Similarity=0.096 Sum_probs=80.0
Q ss_pred CCCcEEEEECCCCCCCcc-----------HHHHHHH---HHHHhCCceEEEEeCCCCCCCCCC--CCC-----C----CC
Q 008093 158 DTTPIAIVIPGLTSDSAA-----------SYIRHLV---FNTAKRGWNVVVSNHRGLGGVSIT--SDC-----F----YN 212 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~-----------~yi~~l~---~~l~~~Gy~Vvv~D~RG~G~S~~~--~~~-----~----~~ 212 (578)
+..++||++|+++|++.. .|+..++ +.+-...|.|+++|..|.|.++-. +.. . +.
T Consensus 40 ~~~NaVlv~h~~tG~~~~~g~~~~~~~~~gww~~liG~g~~lDt~~yfVI~~n~lG~~~~ss~~~s~~p~~~~~yg~~fP 119 (362)
T d2pl5a1 40 SKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSSGPLSIHPETSTPYGSRFP 119 (362)
T ss_dssp TSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSSSTTSBCTTTSSBCGGGSC
T ss_pred CCCCEEEECCCCCcchhccccCCccCCCcchHHHhcCCCCccCccccEEEeeccccCcccccCccccccccccccCcCCc
Confidence 345889999999987532 1212221 122334599999999997654221 111 0 11
Q ss_pred CCchHHHHHHHHHHHHHCCCCcEE-EEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchh
Q 008093 213 AGWTEDAREVIGYLHHEYPKAPLF-AIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL 273 (578)
Q Consensus 213 ~~~~~Dl~~~i~~l~~~~~~~~i~-lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~ 273 (578)
.--..|+.++-..+.+..+-+++. ++|.||||+.++.+|..+|+ .|..+|.||+.....
T Consensus 120 ~~t~~D~v~~~~~ll~~LGI~~l~~viG~SmGGmqAl~wA~~yPd--~v~~~v~ia~sa~~s 179 (362)
T d2pl5a1 120 FVSIQDMVKAQKLLVESLGIEKLFCVAGGSMGGMQALEWSIAYPN--SLSNCIVMASTAEHS 179 (362)
T ss_dssp CCCHHHHHHHHHHHHHHTTCSSEEEEEEETHHHHHHHHHHHHSTT--SEEEEEEESCCSBCC
T ss_pred cchhHHHHHHHHHHHHHhCcCeeEEEeehhHHHHHHHHHHHhCch--HhhhhcccccccccC
Confidence 122478888878888888877766 77999999999999999999 999999999876543
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.40 E-value=3.3e-12 Score=119.53 Aligned_cols=176 Identities=16% Similarity=0.095 Sum_probs=113.6
Q ss_pred CCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCC--Cch-------HHHHHHHHHHH
Q 008093 157 DDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNA--GWT-------EDAREVIGYLH 227 (578)
Q Consensus 157 ~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~--~~~-------~Dl~~~i~~l~ 227 (578)
.+.+|+||++||.++ +...| ..+++.+.+ ++.+++++.+..+............ ... +++.+.++...
T Consensus 14 ~~~~P~vi~lHG~G~-~~~~~-~~~~~~l~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 90 (203)
T d2r8ba1 14 VAGAPLFVLLHGTGG-DENQF-FDFGARLLP-QATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGKMADFIKANR 90 (203)
T ss_dssp CTTSCEEEEECCTTC-CHHHH-HHHHHHHST-TSEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCC-CHHHH-HHHHHHhcc-CCeEEEeccccccccccccccccCccccchhHHHHHHHHHHHHHHHhh
Confidence 457899999999954 44444 677777764 7888888776544332111111111 111 23333444444
Q ss_pred HHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccc
Q 008093 228 HEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRY 307 (578)
Q Consensus 228 ~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l 307 (578)
...+..+++++|+|+||.+++.++..++. .+.+++++++......
T Consensus 91 ~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~--~~~~~~~~~~~~~~~~--------------------------------- 135 (203)
T d2r8ba1 91 EHYQAGPVIGLGFSNGANILANVLIEQPE--LFDAAVLMHPLIPFEP--------------------------------- 135 (203)
T ss_dssp HHHTCCSEEEEEETHHHHHHHHHHHHSTT--TCSEEEEESCCCCSCC---------------------------------
T ss_pred hcCCCceEEEEEecCHHHHHHHHHHhhhh--cccceeeecccccccc---------------------------------
Confidence 45567799999999999999999999988 7888888875432100
Q ss_pred cccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcch---HHHhcCC
Q 008093 308 SRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPW---DECRANK 384 (578)
Q Consensus 308 ~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~---~~~~~~~ 384 (578)
.........|++++||++|++||.+.... .+.+..-
T Consensus 136 -----------------------------------------~~~~~~~~~~~~i~hG~~D~~vp~~~~~~~~~~L~~~g~ 174 (203)
T d2r8ba1 136 -----------------------------------------KISPAKPTRRVLITAGERDPICPVQLTKALEESLKAQGG 174 (203)
T ss_dssp -----------------------------------------CCCCCCTTCEEEEEEETTCTTSCHHHHHHHHHHHHHHSS
T ss_pred -----------------------------------------ccccccccchhhccccCCCCcccHHHHHHHHHHHHHCCC
Confidence 00112335799999999999999874332 2344566
Q ss_pred CEEEEEeCCCCccccccccccCcccHHHHHHHHHHh
Q 008093 385 NVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 385 ~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
++++.+++ |||-.-.+ ..+.+.+||.+
T Consensus 175 ~v~~~~~~-ggH~~~~~--------~~~~~~~wl~~ 201 (203)
T d2r8ba1 175 TVETVWHP-GGHEIRSG--------EIDAVRGFLAA 201 (203)
T ss_dssp EEEEEEES-SCSSCCHH--------HHHHHHHHHGG
T ss_pred CEEEEEEC-CCCcCCHH--------HHHHHHHHHHh
Confidence 78888887 57952111 34668888875
|
| >d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis, brefeldin A esterase [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Bacillus subtilis, brefeldin A esterase [TaxId: 1423]
Probab=99.36 E-value=6.5e-12 Score=128.87 Aligned_cols=140 Identities=15% Similarity=0.062 Sum_probs=98.3
Q ss_pred CCCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCC---CCCccHHHHHHHHHHHhCCceEE
Q 008093 117 CFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLT---SDSAASYIRHLVFNTAKRGWNVV 193 (578)
Q Consensus 117 ~~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~---G~s~~~yi~~l~~~l~~~Gy~Vv 193 (578)
.+..+...+...||..|.++.+.|.+. +...|+||++||-+ |+......+.++..++++|+.|+
T Consensus 76 ~v~~~~~~i~~~dg~~i~~~iy~P~~~-------------~~~~Pviv~~HGGG~~~gs~~~~~~~~~~~~la~~g~~Vv 142 (358)
T d1jkma_ 76 DVETSTETILGVDGNEITLHVFRPAGV-------------EGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVV 142 (358)
T ss_dssp CEEEEEEEEECTTSCEEEEEEEEETTC-------------CSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEE
T ss_pred CccEEEEEEeCCCCCEEEEEEEecCCC-------------CCCCCeEEEecCCeeeeccccccccchHHHHHHhhhheee
Confidence 355677788889999999999987542 24578999999941 22222222567888889999999
Q ss_pred EEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH---CCCCcEEEEEEchHHHHHHHHHhh---cCCCCCccEEEEEc
Q 008093 194 VSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHE---YPKAPLFAIGTSIGANILVKYLGE---EGEKTPVAGAAAIC 267 (578)
Q Consensus 194 v~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~---~~~~~i~lvGhSmGG~ial~ya~~---~p~~~~V~~~Vlis 267 (578)
.+|||..+... +........+|+.++++|+.+. ++..+++++|.|.||++++..+.. .+....+.+.+++.
T Consensus 143 svdYRla~~~~---pe~~~p~~l~D~~~a~~wl~~~~~~~~~~ri~i~G~SAGG~La~~~a~~~~~~~~~~~~~~~~~~~ 219 (358)
T d1jkma_ 143 MVDFRNAWTAE---GHHPFPSGVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASI 219 (358)
T ss_dssp EEECCCSEETT---EECCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEES
T ss_pred eeeeccccccc---ccCCCchhhHHHHHHHHHHHHhccccCCccceeecccCchHHHHHHHHHHhhcCCCcccccccccc
Confidence 99999874432 1111124568999999998753 455689999999999998766533 22222577888887
Q ss_pred CCcch
Q 008093 268 SPWDL 272 (578)
Q Consensus 268 ~p~d~ 272 (578)
+..+.
T Consensus 220 p~~~~ 224 (358)
T d1jkma_ 220 PYISG 224 (358)
T ss_dssp CCCCC
T ss_pred ceecc
Confidence 75544
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Probab=99.36 E-value=6.8e-13 Score=134.24 Aligned_cols=107 Identities=19% Similarity=0.133 Sum_probs=85.7
Q ss_pred CCcEEEEECCCCCCCccH----HHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCc
Q 008093 159 TTPIAIVIPGLTSDSAAS----YIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAP 234 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~----yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~ 234 (578)
++.+|||+||++|+.... |+..+.+.|.++||+|+++|+||+|.|+... ...+++.+.++.+.+..+..+
T Consensus 7 ~k~PvvlvHG~~g~~~~~~~~~~~~~~~~~L~~~G~~V~~~~~~g~g~s~~~~------~~~~~l~~~i~~~~~~~~~~~ 80 (319)
T d1cvla_ 7 TRYPVILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSDDGPN------GRGEQLLAYVKQVLAATGATK 80 (319)
T ss_dssp CSSCEEEECCTTBSSEETTTEESSTTHHHHHHHTTCCEEECCCBCSSCTTSTT------SHHHHHHHHHHHHHHHHCCSC
T ss_pred CCCCEEEECCCCCCcchhhhhhhHHHHHHHHHHCCCEEEEecCCCCCCCCCCc------ccHHHHHHHHHHHHHHhCCCC
Confidence 343367899998765532 2367889999999999999999999876432 235677777777777777789
Q ss_pred EEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchh
Q 008093 235 LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL 273 (578)
Q Consensus 235 i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~ 273 (578)
+++|||||||.++..++.++|+ .++++|++++|....
T Consensus 81 v~lvGhS~GG~~~~~~~~~~p~--~v~~vv~i~~p~~gs 117 (319)
T d1cvla_ 81 VNLIGHSQGGLTSRYVAAVAPQ--LVASVTTIGTPHRGS 117 (319)
T ss_dssp EEEEEETTHHHHHHHHHHHCGG--GEEEEEEESCCTTCC
T ss_pred EEEEeccccHHHHHHHHHHCcc--ccceEEEECCCCCCC
Confidence 9999999999999999999998 899999999986543
|
| >d1jjia_ c.69.1.2 (A:) Carboxylesterase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.35 E-value=4.1e-12 Score=127.68 Aligned_cols=242 Identities=12% Similarity=-0.007 Sum_probs=134.7
Q ss_pred CeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCC--CCCccHHHHHHHHHH-HhCCceEEEE
Q 008093 119 SYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLT--SDSAASYIRHLVFNT-AKRGWNVVVS 195 (578)
Q Consensus 119 ~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~--G~s~~~yi~~l~~~l-~~~Gy~Vvv~ 195 (578)
..+...+..+|| .+.++.|.|. ++.|+||++||-+ .++...+ ..++..+ .+.|+.|+.+
T Consensus 55 ~~~~~~i~~~~g-~i~~~iy~P~----------------~~~P~il~iHGGg~~~g~~~~~-~~~~~~l~~~~g~~Vv~v 116 (311)
T d1jjia_ 55 RVEDRTIKGRNG-DIRVRVYQQK----------------PDSPVLVYYHGGGFVICSIESH-DALCRRIARLSNSTVVSV 116 (311)
T ss_dssp EEEEEEEEETTE-EEEEEEEESS----------------SSEEEEEEECCSTTTSCCTGGG-HHHHHHHHHHHTSEEEEE
T ss_pred eEEEEEEeCCCC-cEEEEEEcCC----------------CCceEEEEEcCCCCccCChhhh-hhhhhhhhhcCCcEEEEe
Confidence 445667777777 7889988763 3459999999941 2333344 3455555 4469999999
Q ss_pred eCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC-----CCCcEEEEEEchHHHHHHHHHhhc--CCCCCccEEEEEcC
Q 008093 196 NHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY-----PKAPLFAIGTSIGANILVKYLGEE--GEKTPVAGAAAICS 268 (578)
Q Consensus 196 D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~-----~~~~i~lvGhSmGG~ial~ya~~~--p~~~~V~~~Vlis~ 268 (578)
|||....... ....+|..++++++.+.. ...+|+++|+|.||++++.++... .......+.+++++
T Consensus 117 ~Yrlap~~~~-------p~~~~d~~~a~~~~~~~~~~~~~d~~ri~v~G~SaGG~la~~~~~~~~~~~~~~~~~~~l~~p 189 (311)
T d1jjia_ 117 DYRLAPEHKF-------PAAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYP 189 (311)
T ss_dssp ECCCTTTSCT-------THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESC
T ss_pred cccccccccc-------chhhhhhhhhhhHHHHhHHHhCcChhHEEEEeeecCCcceeechhhhhhccccccceeeeecc
Confidence 9997643221 134578888888887632 235799999999999887665332 12235778888888
Q ss_pred CcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCc
Q 008093 269 PWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSS 348 (578)
Q Consensus 269 p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~ 348 (578)
..+........... .... ...+... ...+..... ....... ....++
T Consensus 190 ~~~~~~~~~~~~~~---------------------~~~~-~~~~~~~------~~~~~~~~~---~~~~~~~--~~~~sp 236 (311)
T d1jjia_ 190 VVNFVAPTPSLLEF---------------------GEGL-WILDQKI------MSWFSEQYF---SREEDKF--NPLASV 236 (311)
T ss_dssp CCCSSSCCHHHHHT---------------------SSSC-SSCCHHH------HHHHHHHHC---SSGGGGG--CTTTSG
T ss_pred eeeeccCccccccc---------------------cccc-ccccHHH------hhhhhhhcc---ccccccc--ccccch
Confidence 77654322111000 0000 0000000 000000000 0000000 001123
Q ss_pred ccccCCCccceEEEEeCCCCCCCCC-CcchHHHhcCCCEEEEEeCCCCcccc-ccccccCcccHHHHHHHHH
Q 008093 349 STYVGNVSIPLLCISSLDDPVCTVE-AIPWDECRANKNVVLATTWHGGHLAF-FEGLTAAGMWWVRAVNEYL 418 (578)
Q Consensus 349 ~~~l~~I~vPvLiI~g~dDpivp~~-~~~~~~~~~~~~~~l~~~~~GGH~~~-~eg~~~~~~w~~~~v~eFL 418 (578)
.....+...|+++++|++|++++.. .+...+.+..-.+++.++++++|.-+ +....+....+.+.+.+||
T Consensus 237 ~~~~~~~~pP~li~~g~~D~l~d~~~~~~~~L~~~Gv~v~~~~~~g~~H~F~~~~~~~~~a~~a~~~i~~fl 308 (311)
T d1jjia_ 237 IFADLENLPPALIITAEYDPLRDEGEVFGQMLRRAGVEASIVRYRGVLHGFINYYPVLKAARDAINQIAALL 308 (311)
T ss_dssp GGSCCTTCCCEEEEEEEECTTHHHHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHH
T ss_pred hhcccccCCCEEEEEcCCCCChHHHHHHHHHHHHCCCCEEEEEECCCCCccccCCCcCHHHHHHHHHHHHHh
Confidence 3333334579999999999887632 22233455667899999999999422 2211122223456677776
|
| >d1u4na_ c.69.1.2 (A:) Carboxylesterase {Alicyclobacillus acidocaldarius [TaxId: 405212]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Alicyclobacillus acidocaldarius [TaxId: 405212]
Probab=99.29 E-value=8.8e-12 Score=124.40 Aligned_cols=247 Identities=15% Similarity=0.005 Sum_probs=135.1
Q ss_pred CeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCC--CCCccHHHHHHHHHHHhC-CceEEEE
Q 008093 119 SYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLT--SDSAASYIRHLVFNTAKR-GWNVVVS 195 (578)
Q Consensus 119 ~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~--G~s~~~yi~~l~~~l~~~-Gy~Vvv~ 195 (578)
..+...+.. ||+++.++.+.|++. +.+.|+||++||-+ .++...+ ..++..++.+ |+.|+.+
T Consensus 45 ~~~~~~~~~-~g~~i~~~~y~P~~~-------------~~~~Pvvv~iHGGg~~~g~~~~~-~~~~~~~a~~~~~~v~~v 109 (308)
T d1u4na_ 45 EVREFDMDL-PGRTLKVRMYRPEGV-------------EPPYPALVYYHGGGWVVGDLETH-DPVCRVLAKDGRAVVFSV 109 (308)
T ss_dssp EEEEEEEEE-TTEEEEEEEEECTTC-------------CSSEEEEEEECCSTTTSCCTTTT-HHHHHHHHHHHTSEEEEE
T ss_pred cEEEEEEec-CCceEEEEEEecccc-------------CCCCCEEEEEecCeeeeeccccc-cchhhhhhhccccccccc
Confidence 345455554 799999999987542 24679999999931 2233344 4455565555 4678889
Q ss_pred eCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCC-----CCcEEEEEEchHHHHHHHHHhhcCC--CCCccEEEEEcC
Q 008093 196 NHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYP-----KAPLFAIGTSIGANILVKYLGEEGE--KTPVAGAAAICS 268 (578)
Q Consensus 196 D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~-----~~~i~lvGhSmGG~ial~ya~~~p~--~~~V~~~Vlis~ 268 (578)
|+|....... ....+|+.++++++.+... ..+++++|+|.||++++.++....+ ...+.+..++.+
T Consensus 110 ~Yrl~p~~~~-------p~~~~D~~~~~~~l~~~~~~~~~d~~ri~~~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~ 182 (308)
T d1u4na_ 110 DYRLAPEHKF-------PAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYP 182 (308)
T ss_dssp CCCCTTTSCT-------THHHHHHHHHHHHHHTTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHHTCCCCCCEEEESC
T ss_pred cccccccccc-------ccccchhhhhhhHHHHhHHhcCCCcceEEEeeccccchhHHHHHHhhhhccCCCccccccccc
Confidence 9996654321 2346899999999986542 3479999999999998877654322 124566666665
Q ss_pred CcchhhhhHHHhhHHHH---HHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHh
Q 008093 269 PWDLLIGDRFIGRRLIQ---KIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRN 345 (578)
Q Consensus 269 p~d~~~~~~~l~~~~~~---~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~ 345 (578)
..+.............. ......+......+. ....+... . .
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~-------~---------~ 227 (308)
T d1u4na_ 183 STGYDPAHPPASIEENAEGYLLTGGMSLWFLDQYL-------------------NSLEELTH-------P---------W 227 (308)
T ss_dssp CCCCCTTSCCHHHHHTSSSSSSCHHHHHHHHHHHC-------------------SSGGGGGC-------T---------T
T ss_pred ccccccccccchhhhccccccccchhhhhhhhccc-------------------Cccccccc-------h---------h
Confidence 54432211100000000 000000000000000 00000000 0 0
Q ss_pred CCcccccCCC-ccceEEEEeCCCCCCCCC-CcchHHHhcCCCEEEEEeCCCCccc-cccccccCcccHHHHHHHHHHhhc
Q 008093 346 CSSSTYVGNV-SIPLLCISSLDDPVCTVE-AIPWDECRANKNVVLATTWHGGHLA-FFEGLTAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 346 ~s~~~~l~~I-~vPvLiI~g~dDpivp~~-~~~~~~~~~~~~~~l~~~~~GGH~~-~~eg~~~~~~w~~~~v~eFL~~~~ 422 (578)
.+........ ..|+|+++|++|++++.. .+...+.+....+++.++++++|.- .+....+......+.+.+||++.+
T Consensus 228 ~s~~~~~d~~~~Pp~li~~g~~D~l~~~~~~~~~~L~~~G~~v~~~~~~g~~Hgf~~~~~~~~~a~~~~~~~~~fl~~~L 307 (308)
T d1u4na_ 228 FSPVLYPDLSGLPPAYIATAQYDPLRDVGKLYAEALNKAGVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDAL 307 (308)
T ss_dssp TCGGGCSCCTTCCCEEEEEEEECTTHHHHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTSHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhchhhcCCCCeeEEecCcCCchHHHHHHHHHHHHCCCCEEEEEECCCCEeCcccCCCCHHHHHHHHHHHHHHHHhh
Confidence 0111111111 248999999999887532 2222345567789999999999943 223222222345677888887643
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.26 E-value=3.8e-12 Score=126.61 Aligned_cols=102 Identities=15% Similarity=0.109 Sum_probs=83.0
Q ss_pred CcEEEEECCCCCCCcc---HHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEE
Q 008093 160 TPIAIVIPGLTSDSAA---SYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLF 236 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~---~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~ 236 (578)
.| |||+||+.|.+.. .|+..+.+.|.++||+|+++|++|+|.++ ...+++.+.|+.+.+..+..+++
T Consensus 8 ~P-vvlvHG~~g~~~~~~~~yw~~i~~~L~~~G~~v~~~~~~~~~~~~---------~~a~~l~~~i~~~~~~~g~~~v~ 77 (285)
T d1ex9a_ 8 YP-IVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSE---------VRGEQLLQQVEEIVALSGQPKVN 77 (285)
T ss_dssp SC-EEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCSSSCHH---------HHHHHHHHHHHHHHHHHCCSCEE
T ss_pred CC-EEEECCCCCCccccchhhHHHHHHHHHhCCCEEEEeCCCCCCCcH---------HHHHHHHHHHHHHHHHcCCCeEE
Confidence 35 8899999776543 23467899999999999999999998653 12356677777777777788999
Q ss_pred EEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchh
Q 008093 237 AIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL 273 (578)
Q Consensus 237 lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~ 273 (578)
+|||||||.++..++..+|+ +|+++|.+++|....
T Consensus 78 ligHS~GG~~~r~~~~~~p~--~v~~lv~i~tPh~Gs 112 (285)
T d1ex9a_ 78 LIGHSHGGPTIRYVAAVRPD--LIASATSVGAPHKGS 112 (285)
T ss_dssp EEEETTHHHHHHHHHHHCGG--GEEEEEEESCCTTCC
T ss_pred EEEECccHHHHHHHHHHCCc--cceeEEEECCCCCCC
Confidence 99999999999999999988 899999999986543
|
| >d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.24 E-value=3.2e-11 Score=114.39 Aligned_cols=181 Identities=13% Similarity=0.065 Sum_probs=101.7
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhC--CceEEEEeCCC--------CCCCCCCCCCCCC---CCchHHHHHHHH
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKR--GWNVVVSNHRG--------LGGVSITSDCFYN---AGWTEDAREVIG 224 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~--Gy~Vvv~D~RG--------~G~S~~~~~~~~~---~~~~~Dl~~~i~ 224 (578)
+.+++||++||++++ ...+ ..++..+... ++.+++++-+. .+........... ....+++.+..+
T Consensus 12 ~~~~~Vi~lHG~G~~-~~~~-~~~~~~l~~~~~~~~~i~p~ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 89 (218)
T d1auoa_ 12 PADACVIWLHGLGAD-RYDF-MPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEELEVSAK 89 (218)
T ss_dssp CCSEEEEEECCTTCC-TTTT-HHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEECHHHHHHHHH
T ss_pred CCCeEEEEEcCCCCC-hhhH-HHHHHHHHHhCCCcEEEccCCCccccccCCCcccCcccccccccccccchHHHHHHHHH
Confidence 456799999999554 4444 4667777654 45666555321 1000000000000 111223322222
Q ss_pred HHH------HHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhH
Q 008093 225 YLH------HEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGL 296 (578)
Q Consensus 225 ~l~------~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l 296 (578)
.+. .++ +..+++++|+||||.+++..+....+. .+.+++++++.......
T Consensus 90 ~v~~li~~~~~~~i~~~ri~l~GfSqGg~~a~~~~l~~~~~-~~~~~v~~~g~~~~~~~--------------------- 147 (218)
T d1auoa_ 90 MVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQG-PLGGVIALSTYAPTFGD--------------------- 147 (218)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCS-CCCEEEEESCCCTTCCT---------------------
T ss_pred HHHHHHHHHHHhCCCCcceEEeeeCcchHHHHHHHHhcccc-cceeeeeccccCccccc---------------------
Confidence 221 222 456899999999999999876544331 68888887653211000
Q ss_pred HHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcc
Q 008093 297 QDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIP 376 (578)
Q Consensus 297 ~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~ 376 (578)
. . . ..-...++|+|++||++|++||.+...
T Consensus 148 ---------~----~--------~-----------------------------~~~~~~~~pvl~~hG~~D~vvp~~~~~ 177 (218)
T d1auoa_ 148 ---------E----L--------E-----------------------------LSASQQRIPALCLHGQYDDVVQNAMGR 177 (218)
T ss_dssp ---------T----C--------C-----------------------------CCHHHHTCCEEEEEETTCSSSCHHHHH
T ss_pred ---------c----c--------c-----------------------------cchhccCCCEEEEecCCCCccCHHHHH
Confidence 0 0 0 000012579999999999999987433
Q ss_pred h---HHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 377 W---DECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 377 ~---~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
. .+...+.++++..++ +||-.-.+ ..+.+.+||.+.
T Consensus 178 ~~~~~L~~~g~~~~~~~~~-~gH~i~~~--------~~~~i~~wl~~~ 216 (218)
T d1auoa_ 178 SAFEHLKSRGVTVTWQEYP-MGHEVLPQ--------EIHDIGAWLAAR 216 (218)
T ss_dssp HHHHHHHTTTCCEEEEEES-CSSSCCHH--------HHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEEEEC-CCCccCHH--------HHHHHHHHHHHh
Confidence 2 234556688999986 78943222 456788888764
|
| >d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Prolyl oligopeptidase, C-terminal domain domain: Prolyl oligopeptidase, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.23 E-value=1.7e-10 Score=111.84 Aligned_cols=253 Identities=13% Similarity=0.019 Sum_probs=137.0
Q ss_pred eeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCcc-HHHHHHHHHHHhCCceEEEEeCC
Q 008093 120 YRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAA-SYIRHLVFNTAKRGWNVVVSNHR 198 (578)
Q Consensus 120 y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~-~yi~~l~~~l~~~Gy~Vvv~D~R 198 (578)
.++..++..||.+|..+.+.|++. ..+.+.|+||++||-.+.+.. .+.......+...|+.++..+.+
T Consensus 7 ~e~v~~~s~DG~~i~~~l~~P~~~-----------~~~~~~P~iv~~HGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (280)
T d1qfma2 7 TVQIFYPSKDGTKIPMFIVHKKGI-----------KLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIR 75 (280)
T ss_dssp EEEEEEECTTSCEEEEEEEEETTC-----------CCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCT
T ss_pred EEEEEEECCCCCEEEEEEEEcCCC-----------CCCCCeEEEEEECCCCcccCCCCcchhhhhhhcccceeeeccccc
Confidence 355667888999999888887642 113567999999995443222 11122333455567777777777
Q ss_pred CCCCCCCCCC----CCCCCCchHHHHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcch
Q 008093 199 GLGGVSITSD----CFYNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (578)
Q Consensus 199 G~G~S~~~~~----~~~~~~~~~Dl~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~ 272 (578)
+......... ......+.++..........+. ......++|.|.||..+...+...++ .+.+++..++..+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gg~~~~~~~~~~~~--~~~~~~~~~~~~~~ 153 (280)
T d1qfma2 76 GGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPD--LFGCVIAQVGVMDM 153 (280)
T ss_dssp TSSTTHHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGG--GCSEEEEESCCCCT
T ss_pred cccccchhhhhcccccccccccchhhhhhhhhhhhcccccccccccccccccchhhhhhhcccc--hhhheeeeccccch
Confidence 6554311111 1111112234444444444443 34579999999999999988888877 56777777766655
Q ss_pred hhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCccccc
Q 008093 273 LIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYV 352 (578)
Q Consensus 273 ~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l 352 (578)
............. .. .......+...... ....+...++...+
T Consensus 154 ~~~~~~~~~~~~~---~~--------------------------~~~~~~~~~~~~~~--------~~~~~~~~s~~~~~ 196 (280)
T d1qfma2 154 LKFHKYTIGHAWT---TD--------------------------YGCSDSKQHFEWLI--------KYSPLHNVKLPEAD 196 (280)
T ss_dssp TTGGGSTTGGGGH---HH--------------------------HCCTTSHHHHHHHH--------HHCGGGCCCCCSST
T ss_pred hhhccccccccce---ec--------------------------ccCCCccccccccc--------ccccccccchhhhc
Confidence 3321110000000 00 00000000000000 00001122333444
Q ss_pred CCCccceEEEEeCCCCCCCCCCcch---HHH-------hcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhc
Q 008093 353 GNVSIPLLCISSLDDPVCTVEAIPW---DEC-------RANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 353 ~~I~vPvLiI~g~dDpivp~~~~~~---~~~-------~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~ 422 (578)
.....|+|++||++|+.||...... .+. +.+..+++.+++++|| +|.... .+.......+.+||++.+
T Consensus 197 ~~~~pP~LiihG~~D~~Vp~~~s~~l~~aL~~~g~~~~~~~~~~~l~~~~~~gH-gf~~~~-~~~~~~~~~~~~fl~k~L 274 (280)
T d1qfma2 197 DIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHVDTKAGH-GAGKPT-AKVIEEVSDMFAFIARCL 274 (280)
T ss_dssp TCCCCEEEEEEETTCCSSCTHHHHHHHHHHHHHTTTSTTCCSCEEEEEESSCCS-STTCCH-HHHHHHHHHHHHHHHHHH
T ss_pred ccCCCceEEeecccCCCCCHHHHHHHHHHHHHhhhhhhcCCCcEEEEEeCcCCC-CCCCcH-HHHHHHHHHHHHHHHHhc
Confidence 4455689999999999999863221 111 1256789999999999 443210 111122335778998876
Q ss_pred CC
Q 008093 423 SS 424 (578)
Q Consensus 423 ~~ 424 (578)
+.
T Consensus 275 ~~ 276 (280)
T d1qfma2 275 NI 276 (280)
T ss_dssp TC
T ss_pred CC
Confidence 54
|
| >d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal xylanase z {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase z species: Clostridium thermocellum [TaxId: 1515]
Probab=99.10 E-value=6.1e-10 Score=107.53 Aligned_cols=212 Identities=12% Similarity=0.061 Sum_probs=123.5
Q ss_pred EEEEEe-cCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccH-----HHHHHHHHHHhCC-ceEEE
Q 008093 122 RQLFRL-SDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAAS-----YIRHLVFNTAKRG-WNVVV 194 (578)
Q Consensus 122 r~~l~~-~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~-----yi~~l~~~l~~~G-y~Vvv 194 (578)
...+.. .+|..+.+..+.|++- ..+..-|+|+++||.+++.... ............+ ...+.
T Consensus 24 ~~~~~S~~~g~~~~~~v~lP~~y-----------~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (255)
T d1jjfa_ 24 NISYFSTATNSTRPARVYLPPGY-----------SKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLI 92 (255)
T ss_dssp EEEEEETTTTEEEEEEEEECTTC-----------CTTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCE
T ss_pred EEEEEecCCCCEEEEEEEeCCCC-----------CCCCCCcEEEEEecCCCChHHhhhhhHHHHHHHHHHHhhccCCcce
Confidence 333444 3788888888887542 1234569999999986543321 1122223333322 22222
Q ss_pred EeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCC----CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 195 SNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYP----KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 195 ~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~----~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
....+.+.................+.+++.++.+.+. ..+++++|+||||..++.++.++|+ .+++++++|+..
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~i~~~~~~~~d~~~i~i~G~S~GG~~a~~~a~~~Pd--~F~~v~~~sg~~ 170 (255)
T d1jjfa_ 93 IVTPNTNAAGPGIADGYENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLD--KFAYIGPISAAP 170 (255)
T ss_dssp EEEECCCCCCTTCSCHHHHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTT--TCSEEEEESCCT
T ss_pred eeecccccccccccccccchHHHHHHHHHHHHHHhhccccccceeEeeeccchhHHHHHHHHhCCC--cccEEEEEccCc
Confidence 2222222211111111111122456667777777653 3469999999999999999999999 899999998765
Q ss_pred chhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCccc
Q 008093 271 DLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSST 350 (578)
Q Consensus 271 d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~ 350 (578)
+........ .. ...
T Consensus 171 ~~~~~~~~~---------------------------------------~~---------------------------~~~ 184 (255)
T d1jjfa_ 171 NTYPNERLF---------------------------------------PD---------------------------GGK 184 (255)
T ss_dssp TSCCHHHHC---------------------------------------TT---------------------------TTH
T ss_pred CCccccccc---------------------------------------cc---------------------------HHH
Confidence 432110000 00 000
Q ss_pred ccCCCccceEEEEeCCCCCCCCC-CcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 351 YVGNVSIPLLCISSLDDPVCTVE-AIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 351 ~l~~I~vPvLiI~g~dDpivp~~-~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
...+...|+++.+|++|++++.. .+...+.+..-+..+.++++|||-- .+|.+.+-+||.-.
T Consensus 185 ~~~~~~~~~~i~~G~~D~~~~~~~~~~~~L~~~g~~~~~~~~~~ggH~~---------~~W~~~l~~fl~~~ 247 (255)
T d1jjfa_ 185 AAREKLKLLFIACGTNDSLIGFGQRVHEYCVANNINHVYWLIQGGGHDF---------NVWKPGLWNFLQMA 247 (255)
T ss_dssp HHHHHCSEEEEEEETTCTTHHHHHHHHHHHHHTTCCCEEEEETTCCSSH---------HHHHHHHHHHHHHH
T ss_pred HhhccCCcceEEeCCCCCCchHHHHHHHHHHHCCCCEEEEEECCCCcCH---------HHHHHHHHHHHHHH
Confidence 01122478999999999988753 2223344566688999999999931 15677888888544
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Probab=99.06 E-value=3.9e-10 Score=97.08 Aligned_cols=101 Identities=8% Similarity=0.038 Sum_probs=67.2
Q ss_pred EEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCC
Q 008093 122 RQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLG 201 (578)
Q Consensus 122 r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G 201 (578)
|.-+.--+|..++++-. .+.|+||++||.. ..| .+. ..++|+|+++|+||||
T Consensus 2 r~~~~~~~G~~l~y~~~-------------------G~G~pvlllHG~~----~~w----~~~-L~~~yrvi~~DlpG~G 53 (122)
T d2dsta1 2 RAGYLHLYGLNLVFDRV-------------------GKGPPVLLVAEEA----SRW----PEA-LPEGYAFYLLDLPGYG 53 (122)
T ss_dssp EEEEEEETTEEEEEEEE-------------------CCSSEEEEESSSG----GGC----CSC-CCTTSEEEEECCTTST
T ss_pred CceEEEECCEEEEEEEE-------------------cCCCcEEEEeccc----ccc----ccc-ccCCeEEEEEeccccC
Confidence 34344447888877643 2457799999952 223 222 3569999999999999
Q ss_pred CCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCC
Q 008093 202 GVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGE 256 (578)
Q Consensus 202 ~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~ 256 (578)
.|+.. ........+|+.++++.+ +-.+.+++||||||.+++.+++....
T Consensus 54 ~S~~p--~~s~~~~a~~i~~ll~~L----~i~~~~viG~S~Gg~ia~~laa~~~~ 102 (122)
T d2dsta1 54 RTEGP--RMAPEELAHFVAGFAVMM----NLGAPWVLLRGLGLALGPHLEALGLR 102 (122)
T ss_dssp TCCCC--CCCHHHHHHHHHHHHHHT----TCCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred CCCCc--ccccchhHHHHHHHHHHh----CCCCcEEEEeCccHHHHHHHHhhccc
Confidence 99743 221223344555555444 45678999999999999999886543
|
| >d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85a species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.95 E-value=1.3e-08 Score=99.95 Aligned_cols=138 Identities=14% Similarity=0.082 Sum_probs=93.1
Q ss_pred CCeeEEEEEec-CCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCc-cHHHH--HHHHHHHhCCceEE
Q 008093 118 FSYRRQLFRLS-DGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSA-ASYIR--HLVFNTAKRGWNVV 193 (578)
Q Consensus 118 ~~y~r~~l~~~-DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~-~~yi~--~l~~~l~~~Gy~Vv 193 (578)
++-+...+..+ .|..+.+....+ ....|+|+++||.++... ..|.. .+...+.+.|+.++
T Consensus 7 ~~v~~~~~~s~~~~r~~~~~v~~p----------------~~~~Pvl~llhG~~~~~d~~~~~~~~~~~~~~~~~~~~~v 70 (288)
T d1sfra_ 7 LPVEYLQVPSPSMGRDIKVQFQSG----------------GANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVV 70 (288)
T ss_dssp CCCEEEEEEETTTTEEEEEEEECC----------------STTBCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEE
T ss_pred CEEEEEEEECCCCCcEEEEEEeCC----------------CCCceEEEEcCCCCCCCcchhhhhhccHHHHHHhCCCEEE
Confidence 34344445554 577777665433 246799999999865432 23422 24567778899999
Q ss_pred EEeCCCCCCCCCCC-CCCCC-----CCch-HHHHHHHHHHHHHCC--CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEE
Q 008093 194 VSNHRGLGGVSITS-DCFYN-----AGWT-EDAREVIGYLHHEYP--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAA 264 (578)
Q Consensus 194 v~D~RG~G~S~~~~-~~~~~-----~~~~-~Dl~~~i~~l~~~~~--~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~V 264 (578)
+++..+.+...... +.... ..+. .-+.+++.++.++|+ ..++.+.|+||||..++.++.++|+ .+.+++
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~i~~~~~~d~~r~~i~G~S~GG~~A~~~a~~~pd--~f~av~ 148 (288)
T d1sfra_ 71 MPVGGQSSFYSDWYQPACGKAGCQTYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQ--QFVYAG 148 (288)
T ss_dssp EECCCTTCTTCBCSSCEEETTEEECCBHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTT--TEEEEE
T ss_pred EeccCCCCCCccccCcccccccccchhHHHHHHHHhHHHHHHhcCCCCCceEEEEEccHHHHHHHHHHhccc--cccEEE
Confidence 99987765432211 10000 1111 235678888888875 3469999999999999999999999 899999
Q ss_pred EEcCCcchh
Q 008093 265 AICSPWDLL 273 (578)
Q Consensus 265 lis~p~d~~ 273 (578)
++++.++..
T Consensus 149 ~~Sg~~~~~ 157 (288)
T d1sfra_ 149 AMSGLLDPS 157 (288)
T ss_dssp EESCCSCTT
T ss_pred EecCccccc
Confidence 999887654
|
| >d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen pt51/mpb51 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.92 E-value=7.4e-08 Score=93.65 Aligned_cols=133 Identities=11% Similarity=0.117 Sum_probs=87.9
Q ss_pred CeeEEEEEecC-CcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCC-ccHHHH--HHHHHHHhCCceEEE
Q 008093 119 SYRRQLFRLSD-GGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDS-AASYIR--HLVFNTAKRGWNVVV 194 (578)
Q Consensus 119 ~y~r~~l~~~D-G~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s-~~~yi~--~l~~~l~~~Gy~Vvv 194 (578)
++++..+..+. |..+.+.... ...|+|.++||.+|+. ...|.+ .+.+.+.+.++.||.
T Consensus 3 ~~e~~~v~s~~~~r~~~~~v~~------------------~~~pvlylLhG~~g~~~~~~w~~~~~~~~~~~~~~~iVV~ 64 (267)
T d1r88a_ 3 PYENLMVPSPSMGRDIPVAFLA------------------GGPHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVA 64 (267)
T ss_dssp CCEEEEEEETTTTEEEEEEEEC------------------CSSSEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEE
T ss_pred ceEEEEEecccCCceeeEEEEC------------------CCCCEEEEcCCCCCCCCcchhhhccHHHHHHhhCCeEEEE
Confidence 45667777764 5556655432 2338999999986542 234533 245667788999999
Q ss_pred EeCCCCC-CCCCCCCCCCCCCchHHHH-HHHHHHHHHCC--CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 195 SNHRGLG-GVSITSDCFYNAGWTEDAR-EVIGYLHHEYP--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 195 ~D~RG~G-~S~~~~~~~~~~~~~~Dl~-~~i~~l~~~~~--~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
+|--+.+ .+.. +......+..-+. +++.+|.++|+ ..++.+.|+||||..+++++.++|+ .+++++++++.+
T Consensus 65 p~g~~~~~y~~~--~~~~~~~~~tfl~~eL~~~i~~~~~~d~~r~~i~G~SmGG~~Al~la~~~Pd--~F~av~~~SG~~ 140 (267)
T d1r88a_ 65 PAGGAYSMYTNW--EQDGSKQWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPD--RFGFAGSMSGFL 140 (267)
T ss_dssp ECCCTTSTTSBC--SSCTTCBHHHHHHTHHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTT--TEEEEEEESCCC
T ss_pred ECCCCCcCCccc--cccccccHHHHHHHHHHHHHHHhcCCCCCceEEEEEcchHHHHHHHHHhCcc--cccEEEEeCCcc
Confidence 8842111 1111 1111122333333 57778888875 3479999999999999999999999 899999999877
Q ss_pred chh
Q 008093 271 DLL 273 (578)
Q Consensus 271 d~~ 273 (578)
+..
T Consensus 141 ~~~ 143 (267)
T d1r88a_ 141 YPS 143 (267)
T ss_dssp CTT
T ss_pred CCC
Confidence 653
|
| >d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the cellulosomal xylanase y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase y species: Clostridium thermocellum [TaxId: 1515]
Probab=98.80 E-value=2.4e-07 Score=89.18 Aligned_cols=133 Identities=11% Similarity=0.102 Sum_probs=81.9
Q ss_pred CeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHH-----HHHHHHHHH----hCC
Q 008093 119 SYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASY-----IRHLVFNTA----KRG 189 (578)
Q Consensus 119 ~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~y-----i~~l~~~l~----~~G 189 (578)
..+...++..||. ..+..+.|++- ..+.+-|+|+++||.+|+....+ +..++..+. ..+
T Consensus 26 ~v~~~~~~~~~~~-r~~~vylP~~y-----------~~~k~yPvl~~lhG~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (273)
T d1wb4a1 26 RIVKETYTGINGT-KSLNVYLPYGY-----------DPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEP 93 (273)
T ss_dssp EEEEEEEEETTEE-EEEEEEECTTC-----------CTTSCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHHTSSCC
T ss_pred eEEEEEEecCCCe-EEEEEEeCCCC-----------CCCCCceEEEEEeCCCCCcchhhhhccchhHHHHhhhhhhccCC
Confidence 4456667777774 46667777541 11345699999999866544322 122223322 235
Q ss_pred ceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC--------------CCCcEEEEEEchHHHHHHHHHhhcC
Q 008093 190 WNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY--------------PKAPLFAIGTSIGANILVKYLGEEG 255 (578)
Q Consensus 190 y~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~--------------~~~~i~lvGhSmGG~ial~ya~~~p 255 (578)
+.++.++.++.+... .. + ......+....+...+ +..++.+.|+||||..++.++.++|
T Consensus 94 ~~v~~~~~~~~~~~~---~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~G~S~GG~~a~~~a~~~p 166 (273)
T d1wb4a1 94 LIVVTPTFNGGNCTA---QN-F---YQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCL 166 (273)
T ss_dssp EEEEECCSCSTTCCT---TT-H---HHHHHHTHHHHHHHHSCCSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHT
T ss_pred ceeeccccCCCCCcc---cc-c---hhcccccccchhhhhhhhhhhhhhhhcccCCccceEEEeeCCcchhhhhhhhcCC
Confidence 778888877643321 11 1 1122222232332222 3457999999999999999999999
Q ss_pred CCCCccEEEEEcCCcch
Q 008093 256 EKTPVAGAAAICSPWDL 272 (578)
Q Consensus 256 ~~~~V~~~Vlis~p~d~ 272 (578)
+ .+.+++++++.+..
T Consensus 167 d--~f~a~~~~sg~~~~ 181 (273)
T d1wb4a1 167 D--YVAYFMPLSGDYWY 181 (273)
T ss_dssp T--TCCEEEEESCCCCB
T ss_pred C--cceEEEEeCccccc
Confidence 9 89999999887644
|
| >d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.78 E-value=5.1e-07 Score=88.11 Aligned_cols=138 Identities=13% Similarity=0.091 Sum_probs=88.8
Q ss_pred CCCCeeEEEEEec-CCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCC-ccHHHH--HHHHHHHhCCce
Q 008093 116 PCFSYRRQLFRLS-DGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDS-AASYIR--HLVFNTAKRGWN 191 (578)
Q Consensus 116 ~~~~y~r~~l~~~-DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s-~~~yi~--~l~~~l~~~Gy~ 191 (578)
|.++-++..+..+ .|..+..... + .+.|+|.|+||.+|.. .+.|+. .+.+.+.+.|+.
T Consensus 2 ~~~~v~~~~~~s~~~~r~i~~~~~-~-----------------~~~p~lyllhG~~g~~d~~~W~~~~~~~~~~~~~~~i 63 (280)
T d1dqza_ 2 PGLPVEYLQVPSASMGRDIKVQFQ-G-----------------GGPHAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLS 63 (280)
T ss_dssp CSSCEEEEEEEETTTTEEEEEEEE-C-----------------CSSSEEEECCCTTCCSSSCHHHHHSCHHHHHTTSSSE
T ss_pred CCcEEEEEEEecccCCCcceEEee-C-----------------CCCCEEEECCCCCCCCccchhhhcchHHHHHHhCCcE
Confidence 3455566666655 4555655431 1 3458999999986642 345543 245677889999
Q ss_pred EEEEeCCCCCC-CCCCCCC-----CCCCCch-HHHHHHHHHHHHHCC--CCcEEEEEEchHHHHHHHHHhhcCCCCCccE
Q 008093 192 VVVSNHRGLGG-VSITSDC-----FYNAGWT-EDAREVIGYLHHEYP--KAPLFAIGTSIGANILVKYLGEEGEKTPVAG 262 (578)
Q Consensus 192 Vvv~D~RG~G~-S~~~~~~-----~~~~~~~-~Dl~~~i~~l~~~~~--~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~ 262 (578)
||.+|-...+. +....+. .....+. --+.+++.+|.++|+ ..++++.|+||||..++.++.++|+ .+++
T Consensus 64 vV~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~i~~~~~~d~~r~~i~G~SmGG~~Al~lA~~~Pd--~F~a 141 (280)
T d1dqza_ 64 VIMPVGGQSSFYTDWYQPSQSNGQNYTYKWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQ--QFPY 141 (280)
T ss_dssp EEEECCCTTCTTSBCSSSCTTTTCCSCCBHHHHHHTHHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTT--TCSE
T ss_pred EEEECCCCCCcCccccCCcccccCCcchhHHHHHHHHHHHHHHHhcCCCCCceEEEEechHHHHHHHHHHhCcC--ceeE
Confidence 99998432211 1100000 0011111 124567777777764 3468999999999999999999999 8999
Q ss_pred EEEEcCCcchh
Q 008093 263 AAAICSPWDLL 273 (578)
Q Consensus 263 ~Vlis~p~d~~ 273 (578)
++++++.++..
T Consensus 142 v~s~SG~~~~~ 152 (280)
T d1dqza_ 142 AASLSGFLNPS 152 (280)
T ss_dssp EEEESCCCCTT
T ss_pred EEEecCccCcc
Confidence 99999877654
|
| >d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic domain {Shigella flexneri 2a str. 2457T [TaxId: 198215]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Enterochelin esterase, catalytic domain species: Shigella flexneri 2a str. 2457T [TaxId: 198215]
Probab=98.77 E-value=3.2e-09 Score=102.01 Aligned_cols=218 Identities=10% Similarity=0.008 Sum_probs=119.9
Q ss_pred eEEEEEec-CCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCce-EEEEeCC
Q 008093 121 RRQLFRLS-DGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWN-VVVSNHR 198 (578)
Q Consensus 121 ~r~~l~~~-DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~-Vvv~D~R 198 (578)
+...++.+ .|+...+..+.|.+. .+...|+||++||-.. .....+......+.+.|+. ++++...
T Consensus 16 ~~~~~~S~~lg~~~~~~v~~P~~~------------~~~~~Pvvv~lhG~~~-~~~~~~~~~l~~l~~~~~~~~~i~v~~ 82 (246)
T d3c8da2 16 KEIIWKSERLKNSRRVWIFTTGDV------------TAEERPLAVLLDGEFW-AQSMPVWPVLTSLTHRQQLPPAVYVLI 82 (246)
T ss_dssp EEEEEEETTTTEEEEEEEEEC-----------------CCCCEEEESSHHHH-HHTSCCHHHHHHHHHTTSSCSCEEEEE
T ss_pred EEEEEECCCCCCEEEEEEEECCCC------------CCCCCCEEEEeCCcch-hccCcHHHHHHHHHHhCCCCceEEeec
Confidence 44455554 577888877777542 1345799999999421 1111123345556655532 2222221
Q ss_pred CCCCCCCCCC-CCCCCCchHH-HHHHHHHHHHHCC----CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcch
Q 008093 199 GLGGVSITSD-CFYNAGWTED-AREVIGYLHHEYP----KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (578)
Q Consensus 199 G~G~S~~~~~-~~~~~~~~~D-l~~~i~~l~~~~~----~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~ 272 (578)
..+....... ......+.+. ..+++..+...++ ..++.++|+||||..++.++..+|+ .+.+++++++.++.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~el~~~v~~~~~~~~d~~~~~i~G~S~GG~~al~~~~~~P~--~F~a~~~~sg~~~~ 160 (246)
T d3c8da2 83 DAIDTTHRAHELPCNADFWLAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPE--RFGCVLSQSGSYWW 160 (246)
T ss_dssp CCCSHHHHHHHSSSCHHHHHHHHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTT--TCCEEEEESCCTTT
T ss_pred ccccccccccccCccHHHHHHHHHHhhhHHHHhcccccCccceEEEecCchhHHHhhhhccCCc--hhcEEEcCCccccc
Confidence 1121110000 0001112222 2345555555553 2569999999999999999999999 89999999986543
Q ss_pred hhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCccccc
Q 008093 273 LIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYV 352 (578)
Q Consensus 273 ~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l 352 (578)
...... . . . .+.........
T Consensus 161 ~~~~~~--------------------------------~--------~-----------------~---~~~~~~~~~~~ 180 (246)
T d3c8da2 161 PHRGGQ--------------------------------Q--------E-----------------G---VLLEKLKAGEV 180 (246)
T ss_dssp TCTTSS--------------------------------S--------C-----------------C---HHHHHHHTTSS
T ss_pred ccCCcc--------------------------------c--------h-----------------H---HHHHHhhhhhh
Confidence 211000 0 0 0 00000112334
Q ss_pred CCCccceEEEEeCCCCCCCCCC--cchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcC
Q 008093 353 GNVSIPLLCISSLDDPVCTVEA--IPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHS 423 (578)
Q Consensus 353 ~~I~vPvLiI~g~dDpivp~~~--~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~ 423 (578)
.+..+|+++.+|.+|+.+.... +...+....-.+.+.+.++ ||-- .+|.+.+.++|..+..
T Consensus 181 ~~~~~~~~l~~G~~D~~~~~~~~~l~~~L~~~g~~~~~~~~~G-gH~~---------~~W~~~l~~~l~~l~~ 243 (246)
T d3c8da2 181 SAEGLRIVLEAGIREPMIMRANQALYAQLHPIKESIFWRQVDG-GHDA---------LCWRGGLMQGLIDLWQ 243 (246)
T ss_dssp CCCSCEEEEEEESSCHHHHHHHHHHHHHTGGGTTSEEEEEESC-CSCH---------HHHHHHHHHHHHHHHG
T ss_pred hccCCCeEEEecCCCcchhHHHHHHHHHHHHCCCCEEEEEeCC-CCCh---------HHHHHHHHHHHHHHHH
Confidence 5567899999999998664332 2222344566788888885 7821 2467888888876643
|
| >d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Dog (Canis familiaris) [TaxId: 9615]
Probab=98.70 E-value=5.1e-09 Score=105.05 Aligned_cols=107 Identities=14% Similarity=0.198 Sum_probs=78.3
Q ss_pred CCCCcEEEEECCCCCCCccHHHHHHHHHHHhC-CceEEEEeCCCCCCCCCCCCCCCC--CCch----HHHHHHHHHHHHH
Q 008093 157 DDTTPIAIVIPGLTSDSAASYIRHLVFNTAKR-GWNVVVSNHRGLGGVSITSDCFYN--AGWT----EDAREVIGYLHHE 229 (578)
Q Consensus 157 ~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~-Gy~Vvv~D~RG~G~S~~~~~~~~~--~~~~----~Dl~~~i~~l~~~ 229 (578)
+..+|++|++||+.++....|+..+...+.++ +++|+++|++..... .|. ...+ +++..+|+.+...
T Consensus 67 ~~~~pt~iiiHGw~~~~~~~~~~~~~~a~l~~~d~NVI~VDW~~~a~~------~Y~~a~~n~~~Vg~~ia~~i~~l~~~ 140 (337)
T d1rp1a2 67 QTDKKTRFIIHGFIDKGEENWLLDMCKNMFKVEEVNCICVDWKKGSQT------SYTQAANNVRVVGAQVAQMLSMLSAN 140 (337)
T ss_dssp CTTSEEEEEECCCCCTTCTTHHHHHHHHHTTTCCEEEEEEECHHHHSS------CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcCCCCcchHHHHHHHHHhcCCceEEEEeeccccCc------chHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 46789999999999888888878888777665 499999999753321 121 1111 5667777776655
Q ss_pred C--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcch
Q 008093 230 Y--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (578)
Q Consensus 230 ~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~ 272 (578)
+ +.+++++|||||||.+|. +++++-. ++..++.++|.-..
T Consensus 141 ~g~~~~~vhlIGhSLGAhvAG-~aG~~~~--~l~rItgLDPA~P~ 182 (337)
T d1rp1a2 141 YSYSPSQVQLIGHSLGAHVAG-EAGSRTP--GLGRITGLDPVEAS 182 (337)
T ss_dssp HCCCGGGEEEEEETHHHHHHH-HHHHTST--TCCEEEEESCCCTT
T ss_pred cCCChhheEEEeecHHHhhhH-HHHHhhc--cccceeccCCCccc
Confidence 3 457899999999999996 6666655 68888888876533
|
| >d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.57 E-value=2.8e-08 Score=99.39 Aligned_cols=108 Identities=13% Similarity=0.133 Sum_probs=78.5
Q ss_pred CCCCcEEEEECCCCCCCccHHHHHHHHHHHhC-CceEEEEeCCCCCCCCCCCCCCCC--CCch----HHHHHHHHHHHHH
Q 008093 157 DDTTPIAIVIPGLTSDSAASYIRHLVFNTAKR-GWNVVVSNHRGLGGVSITSDCFYN--AGWT----EDAREVIGYLHHE 229 (578)
Q Consensus 157 ~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~-Gy~Vvv~D~RG~G~S~~~~~~~~~--~~~~----~Dl~~~i~~l~~~ 229 (578)
+..+|++|++||+.++....|+..+...+.++ .++|+++|+...... .|. ...+ +.+..+|+.+...
T Consensus 67 ~~~~pt~iiiHG~~~~~~~~~~~~~~~a~l~~~d~NVi~VDW~~~a~~------~Y~~a~~n~~~Vg~~ia~~i~~l~~~ 140 (338)
T d1bu8a2 67 QLDRKTRFIVHGFIDKGEDGWLLDMCKKMFQVEKVNCICVDWRRGSRT------EYTQASYNTRVVGAEIAFLVQVLSTE 140 (338)
T ss_dssp CTTSEEEEEECCSCCTTCTTHHHHHHHHHHTTCCEEEEEEECHHHHSS------CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCceEEEeCcccCCCCcccHHHHHHHHHhcCCceEEEEechhhccc------chHHHHHhHHHHHHHHHHHHHHHHHh
Confidence 46789999999998888887878887777665 599999999764321 122 1112 4566677776554
Q ss_pred --CCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcch
Q 008093 230 --YPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (578)
Q Consensus 230 --~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~ 272 (578)
.+.+++++||||+||.++-......+. +|..++.++|....
T Consensus 141 ~g~~~~~vhlIGhSLGAhiaG~ag~~l~~--kigrItgLDPA~P~ 183 (338)
T d1bu8a2 141 MGYSPENVHLIGHSLGAHVVGEAGRRLEG--HVGRITGLDPAEPC 183 (338)
T ss_dssp HCCCGGGEEEEEETHHHHHHHHHHHHTTT--CSSEEEEESCBCTT
T ss_pred cCCCcceeEEEeccHHHHHHHHHHHhhcc--ccccccccccCcCc
Confidence 345789999999999999876666655 68888888876433
|
| >d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.52 E-value=3e-08 Score=96.96 Aligned_cols=110 Identities=12% Similarity=0.109 Sum_probs=69.5
Q ss_pred CCcEEEEECCCCCCCcc-HHHHHHHHHHHhC--CceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH-CCCCc
Q 008093 159 TTPIAIVIPGLTSDSAA-SYIRHLVFNTAKR--GWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHE-YPKAP 234 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~-~yi~~l~~~l~~~--Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~-~~~~~ 234 (578)
+.| ||++||++++... ..++.+...+.+. |+.|+++++.....+..... +.....+.+.++.+.+++. ....+
T Consensus 5 P~P-VVLvHGlg~s~~~~~~m~~l~~~l~~~~pG~~V~~l~~g~~~~~~~~~~--~~~~~~~~~e~v~~~I~~~~~~~~~ 81 (279)
T d1ei9a_ 5 PLP-LVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEIGKTLREDVENS--FFLNVNSQVTTVCQILAKDPKLQQG 81 (279)
T ss_dssp SCC-EEEECCTTCCSCCTTTTHHHHHHHHHHSTTCCEEECCCSSSHHHHHHHH--HHSCHHHHHHHHHHHHHSCGGGTTC
T ss_pred CCc-EEEECCCCCCCCChHHHHHHHHHHHHHCCCeEEEEEEcCCCcccccccc--hhhhHHHHHHHHHHHHHhccccccc
Confidence 345 7899999664321 2246777777665 89999998754332211000 0011113334444444431 12457
Q ss_pred EEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcch
Q 008093 235 LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (578)
Q Consensus 235 i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~ 272 (578)
+.+|||||||.++-.|+.+.+. .+|..+|.+++|...
T Consensus 82 v~lVGhSqGGLiaR~~i~~~~~-~~V~~lITLgsPH~G 118 (279)
T d1ei9a_ 82 YNAMGFSQGGQFLRAVAQRCPS-PPMVNLISVGGQHQG 118 (279)
T ss_dssp EEEEEETTHHHHHHHHHHHCCS-SCEEEEEEESCCTTC
T ss_pred eeEEEEccccHHHHHHHHHcCC-CCcceEEEECCCCCC
Confidence 9999999999999999988875 369999999988643
|
| >d1pv1a_ c.69.1.34 (A:) Hypothetical esterase YJL068C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical esterase YJL068C domain: Hypothetical esterase YJL068C species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.42 E-value=1.5e-05 Score=78.41 Aligned_cols=136 Identities=15% Similarity=0.166 Sum_probs=80.8
Q ss_pred CCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHH--HHHHHHhCCceEEEEeCCCCCCC-CC
Q 008093 129 DGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRH--LVFNTAKRGWNVVVSNHRGLGGV-SI 205 (578)
Q Consensus 129 DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~--l~~~l~~~Gy~Vvv~D~RG~G~S-~~ 205 (578)
-|....+..+.|++-. ....+.+..-|+|.++||++| ....|++. +...+.+.|..|+..+..+.+.. ..
T Consensus 24 l~~~~~~~VyLP~~y~------~~~~~~~~~yPVLYlLhG~~~-~~~~w~~~~~~~~~~~~~~~~vv~~~~~p~~~~~~~ 96 (299)
T d1pv1a_ 24 TKTSMNVNIYLPKHYY------AQDFPRNKRIPTVFYLSGLTC-TPDNASEKAFWQFQADKYGFAIVFPDTSPRGDEVAN 96 (299)
T ss_dssp SSSEEEEEEEECTTTT------SCCCSSCTTBCEEEEECCTTC-CHHHHHHHSCHHHHHHHHTCEEEECCSSCCSTTSCC
T ss_pred cCCceEEEEEeCCccc------ccCcccCCCCCEEEEcCCCCC-CHHHHHHhhhHHHHHHHcCCceecCCCcccccccCC
Confidence 4777777777775410 000112344699999999955 55555432 34455667888888875332110 00
Q ss_pred C---------CCCCCCC---------CchHH--HHHHHHHHHHHCCC---------CcEEEEEEchHHHHHHHHHhhc--
Q 008093 206 T---------SDCFYNA---------GWTED--AREVIGYLHHEYPK---------APLFAIGTSIGANILVKYLGEE-- 254 (578)
Q Consensus 206 ~---------~~~~~~~---------~~~~D--l~~~i~~l~~~~~~---------~~i~lvGhSmGG~ial~ya~~~-- 254 (578)
. ....|.. ...+| +.+++.++.+.|+. ....+.|+||||.-++.++.++
T Consensus 97 ~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~~i~~EL~p~i~~~~~~~~~r~~~~~~~~~I~G~SmGG~gAl~~al~~~~ 176 (299)
T d1pv1a_ 97 DPEGSWDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGHSMGGYGAICGYLKGYS 176 (299)
T ss_dssp CTTCCSSSSSSCCTTCBCCSHHHHTTCBHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEETHHHHHHHHHHHHTGG
T ss_pred cccccccccCCCccccccccCCcccccchHHHHHHHHHHHHHHhCCcccccccccccceEEEeecccHHHHHHHHHHhcC
Confidence 0 0011110 01122 34566777776642 3689999999999999998764
Q ss_pred CCCCCccEEEEEcCCcchh
Q 008093 255 GEKTPVAGAAAICSPWDLL 273 (578)
Q Consensus 255 p~~~~V~~~Vlis~p~d~~ 273 (578)
|+ ...+++++++..+..
T Consensus 177 p~--~f~~~~s~s~~~~~~ 193 (299)
T d1pv1a_ 177 GK--RYKSCSAFAPIVNPS 193 (299)
T ss_dssp GT--CCSEEEEESCCCCST
T ss_pred CC--ceEEEeeccCcCCcc
Confidence 55 788888888766543
|
| >d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: IroE-like domain: Enterobactin and salmochelin hydrolase IroE species: Escherichia coli [TaxId: 562]
Probab=98.35 E-value=5e-07 Score=86.75 Aligned_cols=134 Identities=11% Similarity=0.024 Sum_probs=76.6
Q ss_pred CeeEEEEEecCCc-EEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCC--CCccHHHHHHHHHHHhCCceEEEE
Q 008093 119 SYRRQLFRLSDGG-MIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTS--DSAASYIRHLVFNTAKRGWNVVVS 195 (578)
Q Consensus 119 ~y~r~~l~~~DG~-~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G--~s~~~yi~~l~~~l~~~Gy~Vvv~ 195 (578)
.++...+..+||+ .+.+..+.|..- ..+..-|+|+++||... .....+ ........|+.||++
T Consensus 12 ~~~~~~~~s~dg~~~~~~~v~~P~~~-----------~~~~~yPvi~~lhG~~~~~~~~~~~---~~~~~~~~~~~vV~v 77 (265)
T d2gzsa1 12 HFSATSFDSVDGTRHYRVWTAVPNTT-----------APASGYPILYMLDGNAVMDRLDDEL---LKQLSEKTPPVIVAV 77 (265)
T ss_dssp EEEEEEEECTTSSCEEEEEEEEESSC-----------CCTTCEEEEEESSHHHHHHHCCHHH---HHHHTTSCCCEEEEE
T ss_pred eeEEEEEEcCCCCEEEEEEEEcCCCC-----------CCCCCceEEEEecCcchhhhHHHHH---HHHHHhcCCCeEEEe
Confidence 4566678888986 566655555431 11345589999999310 011111 112334578999999
Q ss_pred eCCCCCCCCCC----------C--------CCCC-CCCch-----HHHHHHHHHHHHHCC--CCcEEEEEEchHHHHHHH
Q 008093 196 NHRGLGGVSIT----------S--------DCFY-NAGWT-----EDAREVIGYLHHEYP--KAPLFAIGTSIGANILVK 249 (578)
Q Consensus 196 D~RG~G~S~~~----------~--------~~~~-~~~~~-----~Dl~~~i~~l~~~~~--~~~i~lvGhSmGG~ial~ 249 (578)
++++...-... . .... ..+.. ....+++.++.+.+. ..++.++|+||||..++.
T Consensus 78 ~~~~~~~~~~~~r~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~d~~~~~i~G~S~GG~~a~~ 157 (265)
T d2gzsa1 78 GYQTNLPFDLNSRAYDYTPAAESRKTDLHSGRFSRKSGGSNNFRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGLFVLD 157 (265)
T ss_dssp EESSSSSCCHHHHHHHTCCGGGGTTCSCC-----CCCCCHHHHHHHHHHTHHHHHTTTSCEEEEEEEEEEETHHHHHHHH
T ss_pred cCCCCCcCcccccccccccccCcccccccccchhccccchHHHHHHHHHHHHHHHHHhcCCCcCceEEEeccHHHHHHHH
Confidence 99886431100 0 0000 01111 133345566666653 246899999999999997
Q ss_pred HHhhcCCCCCccEEEEEcCC
Q 008093 250 YLGEEGEKTPVAGAAAICSP 269 (578)
Q Consensus 250 ya~~~p~~~~V~~~Vlis~p 269 (578)
.+... + .+.+++++++.
T Consensus 158 ~~~~~-~--~f~~~~a~s~~ 174 (265)
T d2gzsa1 158 SWLSS-S--YFRSYYSASPS 174 (265)
T ss_dssp HHHHC-S--SCSEEEEESGG
T ss_pred HHHcC-c--ccCEEEEECCc
Confidence 66654 4 47777777654
|
| >d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase L1 species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.78 E-value=1.4e-05 Score=81.29 Aligned_cols=106 Identities=15% Similarity=0.102 Sum_probs=67.7
Q ss_pred EEEEECCCCCCCc-----cHHHHH----HHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHH---H
Q 008093 162 IAIVIPGLTSDSA-----ASYIRH----LVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHH---E 229 (578)
Q Consensus 162 iVVllHGl~G~s~-----~~yi~~----l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~---~ 229 (578)
.|||+||+.|-.. -.|+.. +.+.|.+.|++|++.+....+... +-..++..+|+. .
T Consensus 9 PIVLvHGl~Gf~~~~l~~~~YW~G~~~~I~~~L~~~G~~V~~~~V~p~~S~~------------~RA~eL~~~I~~~~~d 76 (388)
T d1ku0a_ 9 PIVLLHGFTGWGREEMLGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPLSSNW------------DRACEAYAQLVGGTVD 76 (388)
T ss_dssp CEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEECCCCSSBCHH------------HHHHHHHHHHHCEEEE
T ss_pred CEEEeCCcccCCccccCcccccCCchhhhHHHHHhCCCEEEEeccCCccCHH------------HHHHHHHHHHhhhhhh
Confidence 3789999977532 134333 677888999999998875443321 223334444431 1
Q ss_pred CC-------------------------CCcEEEEEEchHHHHHHHHHhhcC-----------------------CCCCcc
Q 008093 230 YP-------------------------KAPLFAIGTSIGANILVKYLGEEG-----------------------EKTPVA 261 (578)
Q Consensus 230 ~~-------------------------~~~i~lvGhSmGG~ial~ya~~~p-----------------------~~~~V~ 261 (578)
++ ..|+.+|||||||..+-.++...+ ....|+
T Consensus 77 ~G~~hs~~~~~~~~~r~y~g~~~~~~~~~kVnLIgHS~GGld~Ryl~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~V~ 156 (388)
T d1ku0a_ 77 YGAAHAAKHGHARFGRTYPGLLPELKRGGRVHIIAHSQGGQTARMLVSLLENGSQEEREYAKEHNVSLSPLFEGGHRFVL 156 (388)
T ss_dssp CCHHHHHHHTSCSEEEEECCSCGGGGGTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCEE
T ss_pred hhHhHHhhhcccccCccCcccccccccCCceeEeecccccHHHHHHHHHhccccccccccccccccccccccccCCcceE
Confidence 11 258999999999998865554221 122699
Q ss_pred EEEEEcCCcchhhhhHHH
Q 008093 262 GAAAICSPWDLLIGDRFI 279 (578)
Q Consensus 262 ~~Vlis~p~d~~~~~~~l 279 (578)
.++.|++|.+.......+
T Consensus 157 SvTTIsTPH~GS~~AD~v 174 (388)
T d1ku0a_ 157 SVTTIATPHDGTTLVNMV 174 (388)
T ss_dssp EEEEESCCTTCCGGGGST
T ss_pred EEEeccCCCCCcchhhhh
Confidence 999999998766554433
|
| >d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PHB depolymerase-like domain: Polyhydroxybutyrate depolymerase species: Penicillium funiculosum [TaxId: 28572]
Probab=97.55 E-value=7.1e-05 Score=73.98 Aligned_cols=45 Identities=13% Similarity=-0.032 Sum_probs=32.8
Q ss_pred CCccceEEEEeCCCCCCCCCCcchHHH---hc--CCCEEEEEeCCCCccc
Q 008093 354 NVSIPLLCISSLDDPVCTVEAIPWDEC---RA--NKNVVLATTWHGGHLA 398 (578)
Q Consensus 354 ~I~vPvLiI~g~dDpivp~~~~~~~~~---~~--~~~~~l~~~~~GGH~~ 398 (578)
....|++++||.+|..||+........ .. ..++.++..+++||--
T Consensus 88 ~~~~pvll~hG~~D~~Vpp~~s~~l~~~l~~~~~~~~v~yv~~~gagH~f 137 (318)
T d2d81a1 88 LGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTTTGAVHTF 137 (318)
T ss_dssp GGGCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEETTCCSSE
T ss_pred cCCCCEEEEecCCCCCcCHHHHHHHHHHHHcCcCCCceEEEEeCCCCCCC
Confidence 346899999999999999875443211 11 3368889999999943
|
| >d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB esterase) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Thermophilic para-nitrobenzyl esterase (PNB esterase) species: Bacillus subtilis [TaxId: 1423]
Probab=97.45 E-value=0.00012 Score=76.41 Aligned_cols=128 Identities=14% Similarity=0.103 Sum_probs=81.5
Q ss_pred cEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCC--CCCccHHHHHHHHHHHhCCceEEEEeCCC--CCCCCCC
Q 008093 131 GMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLT--SDSAASYIRHLVFNTAKRGWNVVVSNHRG--LGGVSIT 206 (578)
Q Consensus 131 ~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~--G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG--~G~S~~~ 206 (578)
.-+.|..+.|.. .....|++|++||-+ .++...+.......+.+.+.-||.+|||= +|--...
T Consensus 80 DCL~lni~~P~~-------------~~~~lPV~v~ihGG~~~~g~~~~~~~~~~~~~~~~~vVvV~~nYRlg~~GFl~~~ 146 (483)
T d1qe3a_ 80 DCLYVNVFAPDT-------------PSQNLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLS 146 (483)
T ss_dssp CCCEEEEEEECS-------------SCCSEEEEEEECCSTTTSCCTTSGGGCCHHHHHHHTCEEEEECCCCHHHHSCCCT
T ss_pred cCCEEEEEECCC-------------CCCCCceEEEEeecccccCCccccccccccccccCceEEEeecccccchhhcccc
Confidence 456777776632 134679999999842 22222221123344555689999999995 4432111
Q ss_pred C--CCCCCCCchHHHHHHHHHHHHHC---C--CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcc
Q 008093 207 S--DCFYNAGWTEDAREVIGYLHHEY---P--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (578)
Q Consensus 207 ~--~~~~~~~~~~Dl~~~i~~l~~~~---~--~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d 271 (578)
. ......--..|...+++|+++.- + ..+|.++|+|.||..+...+.....+..+.++|+.++...
T Consensus 147 ~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~~ 218 (483)
T d1qe3a_ 147 SFDEAYSDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGASR 218 (483)
T ss_dssp TTCTTSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCCC
T ss_pred ccccccccccccHHHHHHHHHHHHHHHHcCCCcccceeeccccccchhhhhhcccccCCcceeeccccCCcc
Confidence 1 11111112479999999998753 2 3579999999999998877665444447999999997653
|
| >d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.43 E-value=7.5e-05 Score=79.09 Aligned_cols=125 Identities=16% Similarity=0.086 Sum_probs=78.0
Q ss_pred EEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCC---CCCccHHHHHHHHHHHhCCceEEEEeCC----CCCCCC
Q 008093 132 MIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLT---SDSAASYIRHLVFNTAKRGWNVVVSNHR----GLGGVS 204 (578)
Q Consensus 132 ~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~---G~s~~~yi~~l~~~l~~~Gy~Vvv~D~R----G~G~S~ 204 (578)
-+.|+.+.|... .....|++|++||-+ |+..... ..-....++.+.-||.+||| |+-.++
T Consensus 96 CL~LnI~~P~~~------------~~~~lPV~v~ihGG~~~~gs~~~~~-~~~~~~~~~~~vvvVt~nYRlg~~Gfl~~~ 162 (542)
T d2ha2a1 96 CLYLNVWTPYPR------------PASPTPVLIWIYGGGFYSGAASLDV-YDGRFLAQVEGAVLVSMNYRVGTFGFLALP 162 (542)
T ss_dssp CCEEEEEEESSC------------CSSCEEEEEEECCSTTTCCCTTSGG-GCTHHHHHHHCCEEEEECCCCHHHHHCCCT
T ss_pred CCEEEEEecCCC------------CCCCCcEEEEEEECccccccCcccc-cCchhhhhhccceeEeeeeeccceeeeccc
Confidence 466666665431 134569999999832 2232222 11122334578999999999 432222
Q ss_pred CCCCCCCCCCchHHHHHHHHHHHHH---CC--CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 205 ITSDCFYNAGWTEDAREVIGYLHHE---YP--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 205 ~~~~~~~~~~~~~Dl~~~i~~l~~~---~~--~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
.......+. -..|...+++|+++. ++ ..+|.++|+|.||..+...+.....+..+.++|+.+...
T Consensus 163 ~~~~~~gN~-Gl~Dq~~AL~WV~~nI~~FGGDP~~VTi~G~SAGa~sv~~ll~sp~~~~LF~~aI~~SG~~ 232 (542)
T d2ha2a1 163 GSREAPGNV-GLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (542)
T ss_dssp TCSSCCSCH-HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred ccccCCCcC-CcccHHHHHHHHHHHHHHhhcCccccccccccccccchhhhhhhhhhhHHhhhheeecccc
Confidence 111111111 247999999999875 33 357999999999999887665543333789999988643
|
| >d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Mammalian carboxylesterase (liver carboxylesterase I) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.27 E-value=0.00022 Score=75.13 Aligned_cols=126 Identities=15% Similarity=0.088 Sum_probs=79.8
Q ss_pred EEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCC--CCCccHHHHHHHHHHHhCCceEEEEeCCC--CCCCCCCC
Q 008093 132 MIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLT--SDSAASYIRHLVFNTAKRGWNVVVSNHRG--LGGVSITS 207 (578)
Q Consensus 132 ~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~--G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG--~G~S~~~~ 207 (578)
-+.|..+.|... ..+...|++|++||-+ +++...| .-...+++++.-||.+|||- +|--....
T Consensus 96 CL~LnI~~P~~~-----------~~~~~lPV~v~ihGG~~~~gs~~~~--~~~~~~~~~~vIvVt~nYRLg~~GFl~~~~ 162 (532)
T d2h7ca1 96 CLYLNIYTPADL-----------TKKNRLPVMVWIHGGGLMVGAASTY--DGLALAAHENVVVVTIQYRLGIWGFFSTGD 162 (532)
T ss_dssp CCEEEEEECSCT-----------TSCCCEEEEEEECCSTTTSCCSTTS--CCHHHHHHHTCEEEEECCCCHHHHHCCCSS
T ss_pred CCEEEEEECCCC-----------CCCCCcEEEEEEeCCcccccccccC--CchhhhhcCceEEEEEeeccCCCccccccc
Confidence 456666666431 1234579999999832 2233333 12234467799999999995 34221111
Q ss_pred CCCCCCCchHHHHHHHHHHHHH---CC--CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 208 DCFYNAGWTEDAREVIGYLHHE---YP--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 208 ~~~~~~~~~~Dl~~~i~~l~~~---~~--~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
......--..|...+++|+++. ++ ..+|.++|+|.||..+...+.....+..+.++|+.++..
T Consensus 163 ~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG~~ 230 (532)
T d2h7ca1 163 EHSRGNWGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVA 230 (532)
T ss_dssp TTCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCT
T ss_pred cccccccccHHHHHHHHHHHHHHHHhcCCcceeeeeccccccchHHHHHhhhhccCcchhhhhhcccc
Confidence 1111111247999999999875 33 357999999999998887766544444789999998643
|
| >d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Butyryl cholinesterase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.02 E-value=0.00043 Score=72.70 Aligned_cols=113 Identities=16% Similarity=0.101 Sum_probs=70.0
Q ss_pred CCCcEEEEECCCC--CCCccHHHHHHHHHHHhCCceEEEEeCCC--CCCCCCC-CCCCCCCCchHHHHHHHHHHHHH---
Q 008093 158 DTTPIAIVIPGLT--SDSAASYIRHLVFNTAKRGWNVVVSNHRG--LGGVSIT-SDCFYNAGWTEDAREVIGYLHHE--- 229 (578)
Q Consensus 158 ~~~PiVVllHGl~--G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG--~G~S~~~-~~~~~~~~~~~Dl~~~i~~l~~~--- 229 (578)
...|++|++||-+ .++...+.........+.+.-||.+|||= +|--... ........-..|...+++|+++.
T Consensus 102 ~~~PV~v~ihGG~~~~gs~~~~~~~~~~~~~~~~vVvVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~ 181 (526)
T d1p0ia_ 102 KNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNPEAPGNMGLFDQQLALQWVQKNIAA 181 (526)
T ss_dssp SSEEEEEEECCSTTTSCCTTCGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCTTSCSCHHHHHHHHHHHHHHHHGGG
T ss_pred CCCceEEEEECCCcccccCcccccCccccccccceeEEecccccccccccCCCCcccccccccccchhhhhhhHHHHHHH
Confidence 4569999999832 11222111122223346789999999994 3321111 11111111247999999999875
Q ss_pred CC--CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 230 YP--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 230 ~~--~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
++ ..+|.++|+|.||..+...+.....+..+..+|+.++..
T Consensus 182 FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lf~~aI~~Sg~~ 224 (526)
T d1p0ia_ 182 FGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSF 224 (526)
T ss_dssp GTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCT
T ss_pred hhcCchheeehhhccccceeeccccCCcchhhhhhhhcccccc
Confidence 32 357999999999999876654433333688999888654
|
| >d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray (Torpedo californica) [TaxId: 7787]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Pacific electric ray (Torpedo californica) [TaxId: 7787]
Probab=96.96 E-value=0.0004 Score=73.17 Aligned_cols=124 Identities=15% Similarity=0.106 Sum_probs=78.7
Q ss_pred cEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCC---CCC-ccHHHHHHHHHHHhCCceEEEEeCCC--CCC--
Q 008093 131 GMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLT---SDS-AASYIRHLVFNTAKRGWNVVVSNHRG--LGG-- 202 (578)
Q Consensus 131 ~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~---G~s-~~~yi~~l~~~l~~~Gy~Vvv~D~RG--~G~-- 202 (578)
.-+.|..+.|... ....|++|++||-+ |+. ...| .....+.+.+.-||.+|||= +|-
T Consensus 90 DCL~LnI~~P~~~-------------~~~lPV~v~ihGG~~~~g~~~~~~~--~~~~~~~~~~vvvVt~nYRlg~~GFl~ 154 (532)
T d1ea5a_ 90 DCLYLNIWVPSPR-------------PKSTTVMVWIYGGGFYSGSSTLDVY--NGKYLAYTEEVVLVSLSYRVGAFGFLA 154 (532)
T ss_dssp CCCEEEEEECSSC-------------CSSEEEEEEECCSTTTCCCTTCGGG--CTHHHHHHHTCEEEECCCCCHHHHHCC
T ss_pred cCCEEEEEeCCCC-------------CCCCcEEEEEEcCCcccccCCcccc--CcchhhcccCccEEEEeeccccccccc
Confidence 3566777766331 24679999999842 222 2223 22334556799999999994 332
Q ss_pred CCCCCCCCCCCCchHHHHHHHHHHHHH---CC--CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 203 VSITSDCFYNAGWTEDAREVIGYLHHE---YP--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 203 S~~~~~~~~~~~~~~Dl~~~i~~l~~~---~~--~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
++.......+. -..|...+++|+++. ++ ..+|.++|+|.||..+...+.....+..+.++|+.+++.
T Consensus 155 ~~~~~~~~gN~-Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lF~~aI~~Sg~~ 226 (532)
T d1ea5a_ 155 LHGSQEAPGNV-GLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSP 226 (532)
T ss_dssp CTTCSSSCSCH-HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCT
T ss_pred cccccCCCCcc-cchhHHHHHHHHHHHHHhhcCCccceEeeeecccccchhhhccCccchhhhhhheeecccc
Confidence 21111111111 247999999999875 33 357999999999998877665433333689999988654
|
| >d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Esterase EstA species: Aspergillus niger [TaxId: 5061]
Probab=96.79 E-value=0.0008 Score=70.57 Aligned_cols=113 Identities=20% Similarity=0.218 Sum_probs=69.2
Q ss_pred CCCcEEEEECCCC--CCCccHHH-HHHHHHHHhCCceEEEEeCCC--CCCCCCCCCCCCC--CCchHHHHHHHHHHHHHC
Q 008093 158 DTTPIAIVIPGLT--SDSAASYI-RHLVFNTAKRGWNVVVSNHRG--LGGVSITSDCFYN--AGWTEDAREVIGYLHHEY 230 (578)
Q Consensus 158 ~~~PiVVllHGl~--G~s~~~yi-~~l~~~l~~~Gy~Vvv~D~RG--~G~S~~~~~~~~~--~~~~~Dl~~~i~~l~~~~ 230 (578)
...|++|++||.+ .++...|. ...+ ...+.+.-||.+|||= +|--......... ..-..|...+++|+++.-
T Consensus 95 ~~~PV~v~ihGG~~~~G~~~~~~~~~~~-~~~~~~vVvVt~nYRlg~~GFl~~~~~~~~~~~N~Gl~Dq~~AL~WV~~nI 173 (517)
T d1ukca_ 95 SKLPVWLFIQGGGYAENSNANYNGTQVI-QASDDVIVFVTFNYRVGALGFLASEKVRQNGDLNAGLLDQRKALRWVKQYI 173 (517)
T ss_dssp CCEEEEEEECCSTTTSCCSCSCCCHHHH-HHTTSCCEEEEECCCCHHHHHCCCHHHHHSSCTTHHHHHHHHHHHHHHHHG
T ss_pred CCceEEEEEcCCccccCCCccccchhhh-hhhccccceEEEEecccceeecCccccccccccchhHHHHHHHHHHHHHHH
Confidence 4569999999932 12222221 1222 2345678899999995 3322111100001 112479999999998753
Q ss_pred ---C--CCcEEEEEEchHHHHHHHHHhhc-C-CCCCccEEEEEcCCcc
Q 008093 231 ---P--KAPLFAIGTSIGANILVKYLGEE-G-EKTPVAGAAAICSPWD 271 (578)
Q Consensus 231 ---~--~~~i~lvGhSmGG~ial~ya~~~-p-~~~~V~~~Vlis~p~d 271 (578)
+ ..+|.++|+|.||..+...+... + ....+.++|+.++++.
T Consensus 174 ~~FGGDp~~VTl~G~SAGa~sv~~~l~s~~~~~~gLF~raI~qSg~~~ 221 (517)
T d1ukca_ 174 EQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFWP 221 (517)
T ss_dssp GGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCCC
T ss_pred HhhcCCcccccccccccchhhHHHHHhccccccccccceeeecccccc
Confidence 2 35799999999999887555432 2 2236999999987654
|
| >d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida cylindracea, cholesterol esterase [TaxId: 44322]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Candida cylindracea, cholesterol esterase [TaxId: 44322]
Probab=96.75 E-value=0.0014 Score=69.02 Aligned_cols=128 Identities=13% Similarity=0.091 Sum_probs=76.6
Q ss_pred cEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCC--CCCccHHH-HHHH--HHHHhCCceEEEEeCCC--CCCC
Q 008093 131 GMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLT--SDSAASYI-RHLV--FNTAKRGWNVVVSNHRG--LGGV 203 (578)
Q Consensus 131 ~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~--G~s~~~yi-~~l~--~~l~~~Gy~Vvv~D~RG--~G~S 203 (578)
.-+.|..+.|... ..+...|++|++||-+ .++...|- ..++ ..+..++.-||.+|||- +|--
T Consensus 96 DCL~LnI~~P~~~-----------~~~~~~PVlv~ihGG~f~~g~~~~~~~~~~~~~~~~~~~~vIvVt~nYRLg~~GFl 164 (534)
T d1llfa_ 96 DCLTINVVRPPGT-----------KAGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFL 164 (534)
T ss_dssp CCCEEEEEECTTC-----------CTTCCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHC
T ss_pred cCCEEEEEECCCC-----------CCCCCCeEEEEECCCccccCCCCCCCchhccchhhhccCCeEEEEeecCCCccccc
Confidence 4567777776432 1235689999999843 22332210 1122 23456789999999994 3322
Q ss_pred CCCCCCCCCCC--chHHHHHHHHHHHHHC---C--CCcEEEEEEchHHHHHHHH-HhhcCC-----CCCccEEEEEcCC
Q 008093 204 SITSDCFYNAG--WTEDAREVIGYLHHEY---P--KAPLFAIGTSIGANILVKY-LGEEGE-----KTPVAGAAAICSP 269 (578)
Q Consensus 204 ~~~~~~~~~~~--~~~Dl~~~i~~l~~~~---~--~~~i~lvGhSmGG~ial~y-a~~~p~-----~~~V~~~Vlis~p 269 (578)
..........+ -..|...+++|+++.- + ..+|.++|+|.||..+... +..... +..+.++|+.++.
T Consensus 165 ~~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~~~~~~~sp~s~gLF~raI~qSGs 243 (534)
T d1llfa_ 165 AGDDIKAEGSGNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGA 243 (534)
T ss_dssp CSHHHHHHTCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCC
T ss_pred CCcccccccccccchhHHHHHHHHHHhhhhhhccCCcceeeeeecchHHHHHHHHhccccccccchhhhhhhhhhccCc
Confidence 11100000011 2369999999998753 2 4579999999999866544 433221 1248899999864
|
| >d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]
Probab=96.52 E-value=0.0023 Score=67.46 Aligned_cols=127 Identities=19% Similarity=0.116 Sum_probs=75.3
Q ss_pred cEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCC--CccHH-HHHH-HH-HHHhCCceEEEEeCCC--CCCC
Q 008093 131 GMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSD--SAASY-IRHL-VF-NTAKRGWNVVVSNHRG--LGGV 203 (578)
Q Consensus 131 ~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~--s~~~y-i~~l-~~-~l~~~Gy~Vvv~D~RG--~G~S 203 (578)
.-+.|..+.|... ......|++|++||-+-. +...+ -..+ .. .+...+.-||.+|||= +|--
T Consensus 104 DCL~LnI~~P~~~-----------~~~~~lPV~V~ihGG~f~~G~~~~~~~~~~~~~~~~~~~~vIvVt~nYRlg~~Gfl 172 (544)
T d1thga_ 104 DCLYLNVFRPAGT-----------KPDAKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFL 172 (544)
T ss_dssp CCCEEEEEEETTC-----------CTTCCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHHHHHC
T ss_pred cCCEEEEEECCCC-----------CCCCCCCEEEEeccCCCccCCCccCCcchhhhhhhhccCCeEEEeccccccccccc
Confidence 3467777766432 113467999999994211 11110 0111 22 2356789999999993 3322
Q ss_pred CCCC---CCCCCCCchHHHHHHHHHHHHHC---C--CCcEEEEEEchHHHHHHHHHhhcC------CCCCccEEEEEcCC
Q 008093 204 SITS---DCFYNAGWTEDAREVIGYLHHEY---P--KAPLFAIGTSIGANILVKYLGEEG------EKTPVAGAAAICSP 269 (578)
Q Consensus 204 ~~~~---~~~~~~~~~~Dl~~~i~~l~~~~---~--~~~i~lvGhSmGG~ial~ya~~~p------~~~~V~~~Vlis~p 269 (578)
.... ....+. -..|...+++|+++.- + ..+|.++|+|-||..+...+.... .+..+.++|+.++.
T Consensus 173 ~~~~~~~~~~gN~-Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~sp~~~~~~~s~gLF~raI~qSG~ 251 (544)
T d1thga_ 173 GGDAITAEGNTNA-GLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGG 251 (544)
T ss_dssp CSHHHHHHTCTTH-HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCC
T ss_pred CCchhhccccccH-HHHHhhhhhhhhhhhhcccccCCCceEeeeeccchHHHHHHHhCcCCCcccchhhhhccccccccc
Confidence 1110 001111 2479999999998753 2 357999999999987765554321 11268899999863
|
| >d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.42 E-value=0.062 Score=54.01 Aligned_cols=142 Identities=12% Similarity=0.124 Sum_probs=88.1
Q ss_pred CCCCCeeEEEEEecC-CcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHH---------
Q 008093 115 PPCFSYRRQLFRLSD-GGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFN--------- 184 (578)
Q Consensus 115 ~~~~~y~r~~l~~~D-G~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~--------- 184 (578)
.|.++.-.-.++..| +..+.+ |+.++.. ....+|+||.+-|-.|+|.- + -.+.+.
T Consensus 11 ~~~~~~ysGyl~v~~~~~~lfy-w~~~s~~------------~~~~~Pl~~WlnGGPG~SS~-~-g~~~e~GP~~i~~~~ 75 (421)
T d1wpxa1 11 DPNVTQYTGYLDVEDEDKHFFF-WTFESRN------------DPAKDPVILWLNGGPGCSSL-T-GLFFELGPSSIGPDL 75 (421)
T ss_dssp SSSSCEEEEEEECTTSCCEEEE-EEECCSS------------CTTTSCEEEEECCTTTBCTH-H-HHHHTTSSEEECTTS
T ss_pred CCCCceeeeeeecCCCCceEEE-EEEEeCC------------CCCCCCEEEEECCCCcHHHH-H-HHHHhcCCcEECCCC
Confidence 444554456778765 455654 5554331 13567999999999987774 2 222210
Q ss_pred -HH--h----CCceEEEEe-CCCCCCCCCCCCCCCCC-CchHHHHHHHHHHHHHCC-----CCcEEEEEEchHHHHHHHH
Q 008093 185 -TA--K----RGWNVVVSN-HRGLGGVSITSDCFYNA-GWTEDAREVIGYLHHEYP-----KAPLFAIGTSIGANILVKY 250 (578)
Q Consensus 185 -l~--~----~Gy~Vvv~D-~RG~G~S~~~~~~~~~~-~~~~Dl~~~i~~l~~~~~-----~~~i~lvGhSmGG~ial~y 250 (578)
+. . +-.+++-+| ..|.|-|-...+..++. .-.+|+.+++...-+++| ..++++.|-|+||.-+-.+
T Consensus 76 ~~~~N~~sW~~~anllfiD~PvGtGfSy~~~~~~~~~~~~a~d~~~fl~~f~~~fp~~~~k~~~~yi~GESYgG~yvP~l 155 (421)
T d1wpxa1 76 KPIGNPYSWNSNATVIFLDQPVNVGFSYSGSSGVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGESYAGHYIPVF 155 (421)
T ss_dssp CEEECTTCGGGSSEEEEECCSTTSTTCBCSSCCCCSHHHHHHHHHHHHHHHHHHCTHHHHTCCCEEEEEETTHHHHHHHH
T ss_pred ccccCCcccccccCEEEEecCCCCCceecCCccccchHHHHHHHHHHHHHHHHhChhhhccCCCcEEeeecccccccHHH
Confidence 00 0 125899999 56999885443433332 223577777766666665 3589999999999877766
Q ss_pred Hhhc---C-CCCCccEEEEEcCCcc
Q 008093 251 LGEE---G-EKTPVAGAAAICSPWD 271 (578)
Q Consensus 251 a~~~---p-~~~~V~~~Vlis~p~d 271 (578)
|.+- . ....++|+++.++-.|
T Consensus 156 a~~i~~~~~~~inlkGi~iGng~~d 180 (421)
T d1wpxa1 156 ASEILSHKDRNFNLTSVLIGNGLTD 180 (421)
T ss_dssp HHHHHHCSSCSSCCCEEEEESCCCC
T ss_pred HHHHHHccCCCcceeeeEecCCccc
Confidence 5432 2 2346889887776544
|
| >d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.37 E-value=0.0033 Score=66.51 Aligned_cols=112 Identities=17% Similarity=0.053 Sum_probs=69.9
Q ss_pred CCCCcEEEEECCC---CCCCcc-HHHHHHHHHHHhCCceEEEEeCCC--CCCCCCCC-------CCCCCCCchHHHHHHH
Q 008093 157 DDTTPIAIVIPGL---TSDSAA-SYIRHLVFNTAKRGWNVVVSNHRG--LGGVSITS-------DCFYNAGWTEDAREVI 223 (578)
Q Consensus 157 ~~~~PiVVllHGl---~G~s~~-~yi~~l~~~l~~~Gy~Vvv~D~RG--~G~S~~~~-------~~~~~~~~~~Dl~~~i 223 (578)
....|++|++||- .|+... .| . -.....+.+.-||.+|||= +|--.... ......--..|...++
T Consensus 136 ~~~lPV~V~ihGG~f~~Gs~~~~~~-~-~~~l~~~~~vVvVtinYRlg~fGFl~~~~~~~~~~~~~~~gN~Gl~Dq~~AL 213 (571)
T d1dx4a_ 136 TNGLPILIWIYGGGFMTGSATLDIY-N-ADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAI 213 (571)
T ss_dssp CSSEEEEEEECCSTTTCCCTTCGGG-C-CHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHH
T ss_pred CCCCeEEEEEeCCCccCCCCccccc-c-hhhhhhcCCeeEEeecceeccccccccccccccccccCCCCcccchHHHHHH
Confidence 4567999999993 232222 23 1 1122234468889999994 33221110 0011111237999999
Q ss_pred HHHHHHC---C--CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 224 GYLHHEY---P--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 224 ~~l~~~~---~--~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
+|+++.- + ..+|.++|+|.||..+...+........+..+|+.+...
T Consensus 214 ~WV~~nI~~FGGDP~~VTl~G~SAGa~sv~~ll~sp~~~~lf~~aI~~Sg~~ 265 (571)
T d1dx4a_ 214 RWLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTM 265 (571)
T ss_dssp HHHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCT
T ss_pred HHHHHhhhhhccCCCceEeccccCccceeeeeeccccccccccccceecccc
Confidence 9998753 2 357999999999999887665544444688999887654
|
| >d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol esterase) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Bile-salt activated lipase (cholesterol esterase) species: Cow (Bos taurus) [TaxId: 9913]
Probab=96.33 E-value=0.0031 Score=66.85 Aligned_cols=129 Identities=16% Similarity=0.068 Sum_probs=75.7
Q ss_pred cEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCC---CCCcc-----HHHHHHHHHHHhCCceEEEEeCCC--C
Q 008093 131 GMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLT---SDSAA-----SYIRHLVFNTAKRGWNVVVSNHRG--L 200 (578)
Q Consensus 131 ~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~---G~s~~-----~yi~~l~~~l~~~Gy~Vvv~D~RG--~ 200 (578)
.-+.|..+.|.... ......|++|++||-+ |+... .++-.-...+.+.+.-||.+|||= +
T Consensus 79 DCL~LNI~~P~~~~----------~~~~~lPV~V~iHGG~f~~Gs~~~~~~~~~~~~dg~~la~~~~vIvVt~nYRlg~~ 148 (579)
T d2bcea_ 79 DCLYLNIWVPQGRK----------EVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPL 148 (579)
T ss_dssp CCCEEEEEEEECSS----------SCCCSEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHH
T ss_pred cCCEEEEEECCCCC----------CCCCCCcEEEEECCCcccCCCCCCcccCCccccchhhhhccCCEEEEeeccccccc
Confidence 34667776653211 1124579999999842 21111 000000122234569999999994 3
Q ss_pred CCCCCCCCCCCCCCchHHHHHHHHHHHHHC---C--CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCC
Q 008093 201 GGVSITSDCFYNAGWTEDAREVIGYLHHEY---P--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSP 269 (578)
Q Consensus 201 G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~---~--~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p 269 (578)
|-...........--..|...+++|+++.- + ..+|.++|+|.||..+...+........+.++|+.++.
T Consensus 149 GFl~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDP~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs 222 (579)
T d2bcea_ 149 GFLSTGDSNLPGNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGV 222 (579)
T ss_dssp HHCCCSSTTCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCC
T ss_pred ccccccccCCCccchhhHHHHHHHHHhhhhhhhccCcCceEeeecccccchhhhhhhhhcccCccccceeccCC
Confidence 322211111111112479999999998753 3 35799999999999888666544334479999999864
|
| >d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Human 'protective protein', HPP species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.06 E-value=0.062 Score=54.34 Aligned_cols=138 Identities=14% Similarity=0.113 Sum_probs=84.3
Q ss_pred eEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHH-----------HH---
Q 008093 121 RRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFN-----------TA--- 186 (578)
Q Consensus 121 ~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~-----------l~--- 186 (578)
..-.++..++..+-+ |+.++.. ...++|+++.+-|-.|+|.. + -.+.+. +.
T Consensus 22 ysGyl~~~~~~~lff-w~~~s~~------------~~~~~Pl~~wlnGGPG~SS~-~-g~~~e~GP~~v~~~~~~~~~N~ 86 (452)
T d1ivya_ 22 YSGYLKSSGSKHLHY-WFVESQK------------DPENSPVVLWLNGGPGCSSL-D-GLLTEHGPFLVQPDGVTLEYNP 86 (452)
T ss_dssp EEEEEECSTTEEEEE-EEECCSS------------CGGGSCEEEEECCTTTBCTH-H-HHHTTTSSEEECTTSSCEEECT
T ss_pred eeeeeecCCCceEEE-EEEEcCC------------CCCCCCEEEEECCCCcHHHH-H-HHHHccCCcEEcCCCCeeccCC
Confidence 345677777766654 5544331 12467999999999987764 2 222211 00
Q ss_pred ---hCCceEEEEeC-CCCCCCCCCCCCCCCC--CchHHHHHHHHHHHHHCC---CCcEEEEEEchHHHHHHHHHhhcC--
Q 008093 187 ---KRGWNVVVSNH-RGLGGVSITSDCFYNA--GWTEDAREVIGYLHHEYP---KAPLFAIGTSIGANILVKYLGEEG-- 255 (578)
Q Consensus 187 ---~~Gy~Vvv~D~-RG~G~S~~~~~~~~~~--~~~~Dl~~~i~~l~~~~~---~~~i~lvGhSmGG~ial~ya~~~p-- 255 (578)
.+-.+++-+|. -|.|-|-......... .-..|+.+++...-+++| ..++++.|-|+||.-+-.++...-
T Consensus 87 ~SW~~~anllfIDqPvGtGfS~~~~~~~~~~~~~~a~d~~~~l~~f~~~fp~~~~~~~yi~GESYgG~y~P~ia~~i~~~ 166 (452)
T d1ivya_ 87 YSWNLIANVLYLESPAGVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQD 166 (452)
T ss_dssp TCGGGSSEEEEECCSTTSTTCEESSCCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTC
T ss_pred cchhcccCEEEEecCCCcccccCCCCCCCCCcHHHHHHHHHHHHHHHHhchhhcCCceEEeeccccchhhHHHHHHHHhc
Confidence 01257889997 4999985543322111 123566555554445554 568999999999988776665422
Q ss_pred CCCCccEEEEEcCCcchh
Q 008093 256 EKTPVAGAAAICSPWDLL 273 (578)
Q Consensus 256 ~~~~V~~~Vlis~p~d~~ 273 (578)
....++|+++.++-.|..
T Consensus 167 ~~i~l~Gi~igng~~d~~ 184 (452)
T d1ivya_ 167 PSMNLQGLAVGNGLSSYE 184 (452)
T ss_dssp TTSCEEEEEEESCCSBHH
T ss_pred CcccccceEcCCCccCch
Confidence 224688988887766643
|
| >d1uwca_ c.69.1.17 (A:) Feruloyl esterase A {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Feruloyl esterase A species: Aspergillus niger [TaxId: 5061]
Probab=95.85 E-value=0.0065 Score=57.70 Aligned_cols=52 Identities=17% Similarity=0.269 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCC-CccEEEEEcCC
Q 008093 217 EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKT-PVAGAAAICSP 269 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~-~V~~~Vlis~p 269 (578)
+++...++.+..++|+.++++.||||||.+|...+....... .+ .++..++|
T Consensus 109 ~~i~~~i~~~~~~~~~~~i~vTGHSLGGAlA~L~a~~l~~~~~~~-~~~tFG~P 161 (261)
T d1uwca_ 109 DQVESLVKQQASQYPDYALTVTGHSLGASMAALTAAQLSATYDNV-RLYTFGEP 161 (261)
T ss_dssp HHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHHTTCSSE-EEEEESCC
T ss_pred HHHHHHHHHHHhhCCCcceEEeccchhHHHHHHHHHHHHhcCCCc-ceEEecCc
Confidence 567777888888999999999999999999987665432211 34 35666655
|
| >d1tiba_ c.69.1.17 (A:) Triacylglycerol lipase {Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]
Probab=95.71 E-value=0.0097 Score=56.68 Aligned_cols=52 Identities=13% Similarity=0.158 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCC-CCccEEEEEcCC
Q 008093 217 EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEK-TPVAGAAAICSP 269 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~-~~V~~~Vlis~p 269 (578)
+++...++.+.+++|..++++.||||||.+|..++...... .++. ++..++|
T Consensus 122 ~~v~~~v~~~~~~~~~~~i~vtGHSLGGalA~l~a~~l~~~~~~i~-~~tFG~P 174 (269)
T d1tiba_ 122 DTLRQKVEDAVREHPDYRVVFTGHSLGGALATVAGADLRGNGYDID-VFSYGAP 174 (269)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHHTTSSSCEE-EEEESCC
T ss_pred HHHHHHHHHHHHhCCCcceeeeccchHHHHHHHHHHHHHhccCcce-EEEecCC
Confidence 46777777777889999999999999999998877654332 1454 5566665
|
| >d1qoza_ c.69.1.30 (A:) Acetylxylan esterase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Trichoderma reesei [TaxId: 51453]
Probab=95.01 E-value=0.039 Score=50.17 Aligned_cols=109 Identities=20% Similarity=0.182 Sum_probs=65.1
Q ss_pred EEEEECCCCCCCccHHHHHHHHHHHh--CCceEEEEeCCCCCCCCCCCCCCCCC---CchHHHHHHHHHHHHHCCCCcEE
Q 008093 162 IAIVIPGLTSDSAASYIRHLVFNTAK--RGWNVVVSNHRGLGGVSITSDCFYNA---GWTEDAREVIGYLHHEYPKAPLF 236 (578)
Q Consensus 162 iVVllHGl~G~s~~~yi~~l~~~l~~--~Gy~Vvv~D~RG~G~S~~~~~~~~~~---~~~~Dl~~~i~~l~~~~~~~~i~ 236 (578)
.||+..|-+-......+..++..+.+ .|-.+..++|+..-.........|.. .=+.++...++....+.|+++++
T Consensus 6 ~vi~aRGT~E~~~~G~~~~~~~~~~~~~~~~~~~~v~YPA~~~~~~~~~~~y~~S~~~G~~~~~~~i~~~~~~CP~tkiv 85 (207)
T d1qoza_ 6 HVFGARETTVSQGYGSSATVVNLVIQAHPGTTSEAIVYPACGGQASCGGISYANSVVNGTNAAAAAINNFHNSCPDTQLV 85 (207)
T ss_dssp EEEEECCTTCCSSCGGGHHHHHHHHHHSTTEEEEECCSCCCSSCGGGTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEE
T ss_pred EEEEecCCCCCCCCCcchHHHHHHHHhCCCCeEEEeeecccccccccccccchhhHHHHHHHHHHHHHHHHHhCCCCeEE
Confidence 45666665322221222333333332 36677888888753321111111211 11357778888888889999999
Q ss_pred EEEEchHHHHHHHHHhhcCCC----------------CCccEEEEEcCCc
Q 008093 237 AIGTSIGANILVKYLGEEGEK----------------TPVAGAAAICSPW 270 (578)
Q Consensus 237 lvGhSmGG~ial~ya~~~p~~----------------~~V~~~Vlis~p~ 270 (578)
++|+|.|+.++-..+...+.. .+|.++++++.|-
T Consensus 86 l~GYSQGA~V~~~~l~~~g~~~~~~~~~~~~l~~~~~~~V~avvl~GdP~ 135 (207)
T d1qoza_ 86 LVGYSQGAQIFDNALCGGGDPGEGITNTAVPLTAGAVSAVKAAIFMGDPR 135 (207)
T ss_dssp EEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESCTT
T ss_pred EEeeccchHHHHHHHhccCccccccccCCCCCChhhhhcEEEEEEEeCCC
Confidence 999999999999887542210 1478888887664
|
| >d1tiaa_ c.69.1.17 (A:) Triacylglycerol lipase {Penicillium camembertii [TaxId: 5075]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Penicillium camembertii [TaxId: 5075]
Probab=94.91 E-value=0.015 Score=55.47 Aligned_cols=53 Identities=25% Similarity=0.291 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCC-CCccEEEEEcCC
Q 008093 217 EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEK-TPVAGAAAICSP 269 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~-~~V~~~Vlis~p 269 (578)
+++...++.+..++|..++++.||||||.+|..++...... .....++..++|
T Consensus 121 ~~i~~~i~~~~~~~~~~~i~iTGHSLGGAlA~L~a~~l~~~~~~~~~~~tfG~P 174 (271)
T d1tiaa_ 121 DDIIKELKEVVAQNPNYELVVVGHSLGAAVATLAATDLRGKGYPSAKLYAYASP 174 (271)
T ss_pred HHHHHHHHHHHHhCCCceEEEeccchHHHHHHHHHHHHHHcCCCcceEEEeCCC
Confidence 46777777777888999999999999999998776543221 122345555555
|
| >d1lgya_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizopus niveus [TaxId: 4844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizopus niveus [TaxId: 4844]
Probab=94.70 E-value=0.017 Score=54.86 Aligned_cols=54 Identities=13% Similarity=0.042 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhc----CCC-CCccEEEEEcCCc
Q 008093 217 EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEE----GEK-TPVAGAAAICSPW 270 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~----p~~-~~V~~~Vlis~p~ 270 (578)
+++...++.+.+++|+.++++.||||||.+|...+... +.. .....++..++|-
T Consensus 117 ~~i~~~v~~~~~~~~~~~i~vtGHSLGGAlA~L~a~~l~~~~~~~~~~~i~~~tFG~Pr 175 (265)
T d1lgya_ 117 NDYFPVVQEQLTAHPTYKVIVTGHSLGGAQALLAGMDLYQREPRLSPKNLSIFTVGGPR 175 (265)
T ss_dssp HHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHHHHHCTTCSTTTEEEEEESCCC
T ss_pred HHHHHHHHHHHhhCCCceEEEEecccchHHHHHHHHHHHHhCcccCCCcceEEEecCcc
Confidence 46666777777788999999999999999998766432 210 1123456666653
|
| >d1g66a_ c.69.1.30 (A:) Acetylxylan esterase {Penicillium purpurogenum [TaxId: 28575]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Penicillium purpurogenum [TaxId: 28575]
Probab=94.67 E-value=0.056 Score=49.04 Aligned_cols=109 Identities=17% Similarity=0.170 Sum_probs=64.6
Q ss_pred EEEEECCCCCCCccHHHHHHHHHHHh--CCceEEEEeCCCCCCCCCCCCCCCCCC---chHHHHHHHHHHHHHCCCCcEE
Q 008093 162 IAIVIPGLTSDSAASYIRHLVFNTAK--RGWNVVVSNHRGLGGVSITSDCFYNAG---WTEDAREVIGYLHHEYPKAPLF 236 (578)
Q Consensus 162 iVVllHGl~G~s~~~yi~~l~~~l~~--~Gy~Vvv~D~RG~G~S~~~~~~~~~~~---~~~Dl~~~i~~l~~~~~~~~i~ 236 (578)
.||+..|.+-......+..++..+.+ .|-.+..++|+............|... =+.++...|+...++.|+.+++
T Consensus 6 ~vi~arGT~E~~~~G~~~~~~~~~~~~~~~~~~~~v~YpA~~~~~~~~~~~y~~Sv~~G~~~~~~~i~~~~~~CP~tk~v 85 (207)
T d1g66a_ 6 HVFGARETTASPGYGSSSTVVNGVLSAYPGSTAEAINYPACGGQSSCGGASYSSSVAQGIAAVASAVNSFNSQCPSTKIV 85 (207)
T ss_dssp EEEEECCTTCCSSCGGGHHHHHHHHHHSTTCEEEECCCCCCSSCGGGTSCCHHHHHHHHHHHHHHHHHHHHHHSTTCEEE
T ss_pred EEEEeCCCCCCCCCCccHHHHHHHHHhcCCCeeEEecccccccccccccccccccHHHHHHHHHHHHHHHHHhCCCCcEE
Confidence 46666775321111122333333322 356778888886433211111122211 1256777888888889999999
Q ss_pred EEEEchHHHHHHHHHhhcCCC----------------CCccEEEEEcCCc
Q 008093 237 AIGTSIGANILVKYLGEEGEK----------------TPVAGAAAICSPW 270 (578)
Q Consensus 237 lvGhSmGG~ial~ya~~~p~~----------------~~V~~~Vlis~p~ 270 (578)
++|+|.|+.++..++...+.. .+|.+++++..|.
T Consensus 86 l~GYSQGA~V~~~~l~~~g~~~~~~~~~~~~l~~~~~~~v~avvl~GdP~ 135 (207)
T d1g66a_ 86 LVGYSQGGEIMDVALCGGGDPNQGYTNTAVQLSSSAVNMVKAAIFMGDPM 135 (207)
T ss_dssp EEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESCTT
T ss_pred EEeeccccHHHHHHHhccCCccccccccccCCCchhhhceeeEEEecCCC
Confidence 999999999998887542210 1477888887664
|
| >d3tgla_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizomucor miehei [TaxId: 4839]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizomucor miehei [TaxId: 4839]
Probab=94.50 E-value=0.019 Score=54.39 Aligned_cols=37 Identities=14% Similarity=0.220 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhh
Q 008093 217 EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGE 253 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~ 253 (578)
+++...+..+.+++|..++++.||||||.+|...+..
T Consensus 116 ~~i~~~i~~~~~~~~~~~i~vtGHSLGGAlA~L~a~~ 152 (265)
T d3tgla_ 116 NELVATVLDQFKQYPSYKVAVTGHSLGGATVLLCALD 152 (265)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCceEEEecccchHHHHHHHHHH
Confidence 4566666677778899999999999999999876643
|
| >d1cexa_ c.69.1.30 (A:) Cutinase {Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Cutinase species: Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]
Probab=94.12 E-value=0.031 Score=50.45 Aligned_cols=54 Identities=19% Similarity=0.225 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCC--CCCccEEEEEcCCc
Q 008093 217 EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGE--KTPVAGAAAICSPW 270 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~--~~~V~~~Vlis~p~ 270 (578)
.++...+.....+.|+.+++++|+|.||.++-..+...+. ..+|.++++++.|.
T Consensus 80 ~~~~~~i~~~a~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGDP~ 135 (197)
T d1cexa_ 80 REMLGLFQQANTKCPDATLIAGGYSQGAALAAASIEDLDSAIRDKIAGTVLFGYTK 135 (197)
T ss_dssp HHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHSCHHHHTTEEEEEEESCTT
T ss_pred HHHHHHHHHHHhhCCCCeEEEeeeccccHhhhcccccCChhhhhhEEEEEEEeCCC
Confidence 5778888888889999999999999999999988876542 12799999998764
|
| >d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]
Probab=90.47 E-value=2.1 Score=43.04 Aligned_cols=109 Identities=12% Similarity=0.124 Sum_probs=63.7
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCC--------------------ceEEEEeC-CCCCCCCCCCCCC------
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRG--------------------WNVVVSNH-RGLGGVSITSDCF------ 210 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~G--------------------y~Vvv~D~-RG~G~S~~~~~~~------ 210 (578)
.++|+||.+-|-.|+|... .+ +.+.| .+++-+|. .|.|-|-......
T Consensus 65 ~~~Pl~lWlnGGPGcSS~~---g~---f~E~GP~~v~~~~~l~~Np~SWn~~an~lfIDqPvGvGfSy~~~~~~~~~~~~ 138 (483)
T d1ac5a_ 65 VDRPLIIWLNGGPGCSSMD---GA---LVESGPFRVNSDGKLYLNEGSWISKGDLLFIDQPTGTGFSVEQNKDEGKIDKN 138 (483)
T ss_dssp SSCCEEEEECCTTTBCTHH---HH---HHSSSSEEECTTSCEEECTTCGGGTSEEEEECCSTTSTTCSSCCSSGGGSCTT
T ss_pred CCCCEEEEECCCCcHHHHH---HH---HHccCCeEECCCCceeeCCCcccccCCEEEEeCCCCcCeeecCCCCccccccc
Confidence 3569999999999987742 12 22222 47888886 5888885432211
Q ss_pred -CCCCc---hHHHHHHHHHHHHHCC---CCcEEEEEEchHHHHHHHHHhhc----------CCCCCccEEEEEcCCcch
Q 008093 211 -YNAGW---TEDAREVIGYLHHEYP---KAPLFAIGTSIGANILVKYLGEE----------GEKTPVAGAAAICSPWDL 272 (578)
Q Consensus 211 -~~~~~---~~Dl~~~i~~l~~~~~---~~~i~lvGhSmGG~ial~ya~~~----------p~~~~V~~~Vlis~p~d~ 272 (578)
+..+. ..|+.+++...-+++| ..++++.|-|+||.-+-.+|..- .....++++++.++-.|.
T Consensus 139 ~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yI~GESYgG~YvP~la~~i~~~n~~~~~~~~~inLkGi~IGNg~~d~ 217 (483)
T d1ac5a_ 139 KFDEDLEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAILNHNKFSKIDGDTYDLKALLIGNGWIDP 217 (483)
T ss_dssp SSCCSHHHHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHHHHHHHHHCCSTTSCCEEEEEEEEEECCCH
T ss_pred cccCCHHHHHHHHHHHHHHHHHhCcccccCCeEEeecccccchHHHHHHHHHHhccccccCCCcccceeeeecCCccCh
Confidence 11111 1233344443334554 46899999999997766555332 112358887765554443
|