Citrus Sinensis ID: 008112

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------
MAQVVATRSIQSSFMCPASGSAQERASEKLKPSSFASTVLSREEKKRVTLVRKSTKISAQKATRVEPEVVPVSPEDVPKRDGEFQHFGGLQQLGDTSVSMWTKPTVRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEVRSGDLPQPITLTSGQEFTFTIQRGVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTLGTSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDNALGLLQKQGMVKEGEEVALLQSGRQPIWRFQSTHNIQVRKV
cccEEEEcccccccccccccHHHHHHHHccccccccccccHHHHcccHHHHHccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccEEEEcccccccHHHHHHHHHHcccEEEEccccccHHHHHHHHHHHHHHHHHccccEEEEEEcccccEEEEEcccccEEEccccEEEEEEccccccccEEEEEccccccccccccEEEEEccEEEEEEEEEEccEEEEEEEEccEEccccccccccccccccccccccHHHHHHHHHccccEEEEcccccHHHHHHHHHHHHHccccccEEEccccHHccccHHHHHHHccEEEEEccccccccccccccHHHHHHHHHHHHccccEEEEcccHHHHcccccccccHHHHHHHHHHccccHHHccccccccccHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHcccEEEEEccccHHHHHHHcccccccEEEEcccHHHHHHHccccccEEEEEcccccHHHHHHHHHHHHHHccccccccEEEEEcccccccccccccEEEEEEEc
ccEEEEEEcccccccccccccHHHHHHHHcccccHHHHHcccccccccEEEEcccEEEcccccccccEEccccccccccHHHHHHHHHHHHHHHHcccccccccccccccEEEEEcccccccHHHHHHHHHHcEEEEEEEcccccHHHHHHHHHHHHHHHHHHcccccEEEEEccccccEEccccccEEEccccEEEEEEccccccccEEEEccccHHHHcccccEEEEccccEEEEEEEEcccEEEEEEcccEEcccccEEEccccccccccccHHHHHHHHHHHHccccEEEEcccccHHHHHHHHHHHcccccccEEEEEEcccHHHHcHHHHHHHccEEEEEHHHHHHHcccccHHHHHHHHHHHHHHHcccEEEEccccHHHHccccccHHHHHHHHHHHHHcccEEEEcHHHHccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccEEEEEccccHHHHHHHHccccccEEEEcccHHHHHHHHHHHcccEEEccccccHHHHHHHHHHHHHHccccccccEEEEEEcccccccccccccEEEEEEc
MAQVVATRSiqssfmcpasgsaqeraseklkpssfastvlSREEKKRVTLVRKSTKISAqkatrvepevvpvspedvpkrdgefqhfgglqqlgdtsvsmwtkptvrrktkivctigpstnTREMIWKLAEAGMNVARlnmshgdhashQKVIDLVKEYNAQSKDNVIAIMLdtkgpevrsgdlpqpitltsgqefTFTIqrgvgsaecvsvnyddfvndveVGDMLLVDGGMMSLLVKsktedsvkcevvdggelksrrhlnvrgksatlpsitekdwddikfgvdnkvdFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIesadsipnlhsiitasdgamvargdlgaelpieevplLQEEIIRTCRSMGKAVIVATNMLEsmivhptptraevSDIAIAVREGADAVmlsgetahgkfplkAVKVMHTVSLRteatitggamppnlgQAFKNHMSEMFAYHATMMSNTLGTSIVVFTRTGFMAILLshyrpsgtifafTNEKRIQQRLSLYQGvcpiymefsddaEETFDNALGLLQKQGMVKEGEEVALLqsgrqpiwrfqsthniqvrkv
maqvvatrsiqssfmcpasgsaqeraseklkpssfastvlsreekkrvtlvrkstkisaqkatrvepevvpvspedvPKRDGEFQHfgglqqlgdtsvsmwtkptvrrktkivctigpstntrEMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEVRSGDLPQPITLTSGQEFTFTIQRGVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSLLvksktedsvkcevvdggelksrrhlnvrgksatlpsitekdwddiKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGetahgkfplkAVKVMHTVSLRTeatitggamppNLGQAFKNHMSEMFAYHATMMSNTLGTSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDNALGLLQKQGMVKEGEEVALlqsgrqpiwrfqsthniqvrkv
MAQVVATRSIQSSFMCPASGSAQERASEKLKPSSFASTVLSREEKKRVTLVRKSTKISAQKATRvepevvpvspedvpKRDGEFQHFGGLQQLGDTSVSMWTKPTVRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEVRSGDLPQPITLTSGQEFTFTIQRGVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTLGTSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDNALGLLQKQGMVKEGEEVALLQSGRQPIWRFQSTHNIQVRKV
*************************************************************************************HFGGLQQLGDTSVSMWTKPTVRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTK***********PITLTSGQEFTFTIQRGVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSKTEDSVKCEVVDGG*******L*V****ATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTLGTSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDNALGLLQKQGMVKEGEEVALLQSGRQPIWRFQ**********
*************************************************************************************HFGGLQQLGDT*VSMWTKPTVRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEVRSGDLPQPITLTSGQEFTFTIQRGVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAM************SEMFAYHATMMSNTLGTSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDNALGLLQKQGMVKEGEEVALLQSGRQPIWRFQSTHNIQVRKV
**********QSSF*************************************************************DVPKRDGEFQHFGGLQQLGDTSVSMWTKPTVRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEVRSGDLPQPITLTSGQEFTFTIQRGVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTLGTSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDNALGLLQKQGMVKEGEEVALLQSGRQPIWRFQSTHNIQVRKV
**QVVATRSIQSSFMCPA**********KLKPSSFASTVLSREEKKRVTLVRKSTKISAQKATRVEPEVVPVSPEDVPKRDGEFQHFGGLQQLGDTSVSMWTKPTVRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEVRSGDLPQPITLTSGQEFTFTIQRGVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTLGTSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDNALGLLQKQGMVKEGEEVALLQSGRQPIWRFQSTHNIQVRKV
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MAQVVATRSIQSSFMCPASGSAQERASEKLKPSSFASTVLSREEKKRVTLVRKSTKISAQKATRVEPEVVPVSPEDVPKRDGEFQHFGGLQQLGDTSVSMWTKPTVRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEVRSGDLPQPITLTSGQEFTFTIQRGVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTLGTSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDNALGLLQKQGMVKEGEEVALLQSGRQPIWRFQSTHNIQVRKV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query577 2.2.26 [Sep-21-2011]
Q9FLW9579 Plastidial pyruvate kinas yes no 1.0 0.996 0.827 0.0
Q40546562 Pyruvate kinase isozyme G N/A no 0.814 0.836 0.789 0.0
Q93Z53571 Plastidial pyruvate kinas no no 0.814 0.823 0.785 0.0
P55964418 Pyruvate kinase isozyme G N/A no 0.720 0.995 0.794 0.0
Q9LIK0596 Plastidial pyruvate kinas no no 0.786 0.761 0.466 1e-108
Q43117583 Pyruvate kinase isozyme A N/A no 0.786 0.778 0.457 1e-107
Q40545593 Pyruvate kinase isozyme A N/A no 0.767 0.747 0.453 1e-106
Q6GG09 585 Pyruvate kinase OS=Staphy yes no 0.748 0.738 0.409 3e-93
Q7A0N4 585 Pyruvate kinase OS=Staphy yes no 0.748 0.738 0.409 3e-93
Q6G8M9 585 Pyruvate kinase OS=Staphy yes no 0.748 0.738 0.409 3e-93
>sp|Q9FLW9|PKP2_ARATH Plastidial pyruvate kinase 2 OS=Arabidopsis thaliana GN=PKP2 PE=1 SV=1 Back     alignment and function desciption
 Score = 1000 bits (2585), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 479/579 (82%), Positives = 519/579 (89%), Gaps = 2/579 (0%)

Query: 1   MAQVVATRSIQSSFMCPASGSAQERASEKLKPSSFASTVLSREEKKRVTLVRKSTKI--S 58
           MAQVVATRSIQ S + P  GS   R+ + LKP+SFA  VL  E K+   +  +S ++  +
Sbjct: 1   MAQVVATRSIQGSMLSPNGGSVSTRSEKLLKPASFAVKVLGNEAKRSGRVSVRSRRVVDT 60

Query: 59  AQKATRVEPEVVPVSPEDVPKRDGEFQHFGGLQQLGDTSVSMWTKPTVRRKTKIVCTIGP 118
             ++ RVE EV+PVSPEDVP R+ + +    +QQ GDTSV MW+KPTVRRKTKIVCT+GP
Sbjct: 61  TVRSARVETEVIPVSPEDVPNREEQLERLLEMQQFGDTSVGMWSKPTVRRKTKIVCTVGP 120

Query: 119 STNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPE 178
           STNTREMIWKLAEAGMNVAR+NMSHGDHASH+KVIDLVKEYNAQ+KDN IAIMLDTKGPE
Sbjct: 121 STNTREMIWKLAEAGMNVARMNMSHGDHASHKKVIDLVKEYNAQTKDNTIAIMLDTKGPE 180

Query: 179 VRSGDLPQPITLTSGQEFTFTIQRGVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSLLV 238
           VRSGDLPQPI L  GQEFTFTI+RGV +  CVSVNYDDFVNDVE GDMLLVDGGMMS +V
Sbjct: 181 VRSGDLPQPIMLDPGQEFTFTIERGVSTPSCVSVNYDDFVNDVEAGDMLLVDGGMMSFMV 240

Query: 239 KSKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFV 298
           KSKT+DSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDW+DIKFGV+NKVDFYAVSFV
Sbjct: 241 KSKTKDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWEDIKFGVENKVDFYAVSFV 300

Query: 299 KDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEE 358
           KDAQVVHELK YL++ GADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEE
Sbjct: 301 KDAQVVHELKKYLQNSGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEE 360

Query: 359 VPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGET 418
           VP+LQEEII  CRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGET
Sbjct: 361 VPILQEEIINLCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGET 420

Query: 419 AHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTLGTSI 478
           AHGKFPLKA  VMHTV+LRTEATIT G MPPNLGQAFKNHMSEMFAYHATMMSNTLGTS 
Sbjct: 421 AHGKFPLKAAGVMHTVALRTEATITSGEMPPNLGQAFKNHMSEMFAYHATMMSNTLGTST 480

Query: 479 VVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDNAL 538
           VVFTRTGFMAILLSHYRPSGTI+AFTNEK+IQQRL+LYQGVCPIYMEF+DDAEETF NAL
Sbjct: 481 VVFTRTGFMAILLSHYRPSGTIYAFTNEKKIQQRLALYQGVCPIYMEFTDDAEETFANAL 540

Query: 539 GLLQKQGMVKEGEEVALLQSGRQPIWRFQSTHNIQVRKV 577
             L KQGMVK+GEE+A++QSG QPIWR QSTHNIQVRKV
Sbjct: 541 ATLLKQGMVKKGEEIAIVQSGTQPIWRSQSTHNIQVRKV 579
Required for plastidial pyruvate kinase activity. Involved in seed oil accumulation, embryo development and seed storage compounds mobilization upon germination.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 4EC: 0
>sp|Q40546|KPYG_TOBAC Pyruvate kinase isozyme G, chloroplastic OS=Nicotiana tabacum PE=2 SV=1 Back     alignment and function description
>sp|Q93Z53|PKP3_ARATH Plastidial pyruvate kinase 3, chloroplastic OS=Arabidopsis thaliana GN=PKP3 PE=1 SV=1 Back     alignment and function description
>sp|P55964|KPYG_RICCO Pyruvate kinase isozyme G, chloroplastic (Fragment) OS=Ricinus communis PE=2 SV=1 Back     alignment and function description
>sp|Q9LIK0|PKP1_ARATH Plastidial pyruvate kinase 1, chloroplastic OS=Arabidopsis thaliana GN=PKP1 PE=1 SV=1 Back     alignment and function description
>sp|Q43117|KPYA_RICCO Pyruvate kinase isozyme A, chloroplastic OS=Ricinus communis PE=1 SV=1 Back     alignment and function description
>sp|Q40545|KPYA_TOBAC Pyruvate kinase isozyme A, chloroplastic OS=Nicotiana tabacum PE=2 SV=1 Back     alignment and function description
>sp|Q6GG09|KPYK_STAAR Pyruvate kinase OS=Staphylococcus aureus (strain MRSA252) GN=pyk PE=1 SV=1 Back     alignment and function description
>sp|Q7A0N4|KPYK_STAAW Pyruvate kinase OS=Staphylococcus aureus (strain MW2) GN=pyk PE=3 SV=1 Back     alignment and function description
>sp|Q6G8M9|KPYK_STAAS Pyruvate kinase OS=Staphylococcus aureus (strain MSSA476) GN=pyk PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query577
255545104580 pyruvate kinase, putative [Ricinus commu 0.994 0.989 0.883 0.0
225462665577 PREDICTED: pyruvate kinase isozyme G, ch 0.998 0.998 0.875 0.0
302143717576 unnamed protein product [Vitis vinifera] 0.996 0.998 0.877 0.0
147860666580 hypothetical protein VITISV_007675 [Viti 0.996 0.991 0.871 0.0
356576030575 PREDICTED: pyruvate kinase isozyme G, ch 0.996 1.0 0.852 0.0
356535816578 PREDICTED: pyruvate kinase isozyme G, ch 0.996 0.994 0.850 0.0
356559692577 PREDICTED: pyruvate kinase isozyme G, ch 0.996 0.996 0.848 0.0
356530788577 PREDICTED: pyruvate kinase isozyme G, ch 0.996 0.996 0.848 0.0
224118132582 predicted protein [Populus trichocarpa] 0.994 0.986 0.849 0.0
297792631579 hypothetical protein ARALYDRAFT_495356 [ 1.0 0.996 0.830 0.0
>gi|255545104|ref|XP_002513613.1| pyruvate kinase, putative [Ricinus communis] gi|223547521|gb|EEF49016.1| pyruvate kinase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score = 1074 bits (2778), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 515/583 (88%), Positives = 550/583 (94%), Gaps = 9/583 (1%)

Query: 1   MAQVVATRSIQSSFMCPASGSAQERASEKLKPSSFASTVLSREEKKR-----VTLVRKST 55
           MAQVVATRSI +S +CP SGS+ +  ++KLKPSSFAS +LSRE+ KR     +T+ R++T
Sbjct: 1   MAQVVATRSIHTSLLCPTSGSSLQDRADKLKPSSFASKLLSREDNKRNKNSSLTISRRNT 60

Query: 56  KI-SAQKATRVEPEVVPVSPEDVPKRDGEFQHFGGLQQLGDTSVSMWTKPTVRRKTKIVC 114
           +I +A ++TRVE EV+PVSPEDVP+R+ +  H   LQQLGDTSVSMW+KP VRRKTKIVC
Sbjct: 61  QIQAANRSTRVETEVIPVSPEDVPQREEQVLH---LQQLGDTSVSMWSKPVVRRKTKIVC 117

Query: 115 TIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDT 174
           TIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDT
Sbjct: 118 TIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDT 177

Query: 175 KGPEVRSGDLPQPITLTSGQEFTFTIQRGVGSAECVSVNYDDFVNDVEVGDMLLVDGGMM 234
           KGPEVRSGDLPQPI L+ GQEFTFTI+RGVG+A+CVSVNYDDFVNDVEVGDMLLVDGGMM
Sbjct: 178 KGPEVRSGDLPQPIMLSPGQEFTFTIRRGVGTADCVSVNYDDFVNDVEVGDMLLVDGGMM 237

Query: 235 SLLVKSKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYA 294
           SLLVKSKTEDSV+CEV+DGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYA
Sbjct: 238 SLLVKSKTEDSVRCEVIDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYA 297

Query: 295 VSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAEL 354
           VSFVKDAQVVHELKNYL+ CGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAEL
Sbjct: 298 VSFVKDAQVVHELKNYLQGCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAEL 357

Query: 355 PIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVML 414
           PIEEVPLLQEEIIR CRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREG+DAVML
Sbjct: 358 PIEEVPLLQEEIIRLCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGSDAVML 417

Query: 415 SGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTL 474
           SGETAHGKFPLKAVKVMHTV+LRTEATI GG MPPNLGQAFKNHMSEMFAYHATMMSNTL
Sbjct: 418 SGETAHGKFPLKAVKVMHTVALRTEATIVGGTMPPNLGQAFKNHMSEMFAYHATMMSNTL 477

Query: 475 GTSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETF 534
           GTSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRL+LYQGVCPIYM+FSDDAEETF
Sbjct: 478 GTSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLALYQGVCPIYMQFSDDAEETF 537

Query: 535 DNALGLLQKQGMVKEGEEVALLQSGRQPIWRFQSTHNIQVRKV 577
            NAL +L+ QGMVKEGEEVAL+QSGRQPIWRFQSTHNIQVRKV
Sbjct: 538 ANALSVLKNQGMVKEGEEVALVQSGRQPIWRFQSTHNIQVRKV 580

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225462665|ref|XP_002264485.1| PREDICTED: pyruvate kinase isozyme G, chloroplastic-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|302143717|emb|CBI22578.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147860666|emb|CAN81451.1| hypothetical protein VITISV_007675 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356576030|ref|XP_003556138.1| PREDICTED: pyruvate kinase isozyme G, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|356535816|ref|XP_003536439.1| PREDICTED: pyruvate kinase isozyme G, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|356559692|ref|XP_003548131.1| PREDICTED: pyruvate kinase isozyme G, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|356530788|ref|XP_003533962.1| PREDICTED: pyruvate kinase isozyme G, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|224118132|ref|XP_002317739.1| predicted protein [Populus trichocarpa] gi|222858412|gb|EEE95959.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297792631|ref|XP_002864200.1| hypothetical protein ARALYDRAFT_495356 [Arabidopsis lyrata subsp. lyrata] gi|297310035|gb|EFH40459.1| hypothetical protein ARALYDRAFT_495356 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query577
TAIR|locus:2176912579 PKP-BETA1 "plastidic pyruvate 1.0 0.996 0.808 2.8e-247
TAIR|locus:2033760571 PKp3 "plastidial pyruvate kina 0.814 0.823 0.785 6.3e-195
TAIR|locus:2084583596 PKP-ALPHA [Arabidopsis thalian 0.788 0.763 0.467 1.3e-98
TIGR_CMR|BA_4843 585 BA_4843 "pyruvate kinase" [Bac 0.809 0.798 0.386 3.9e-83
UNIPROTKB|P0AD61470 pykF "pyruvate kinase I monome 0.781 0.959 0.403 1.3e-82
UNIPROTKB|Q9KUN0470 VC_0485 "Pyruvate kinase" [Vib 0.774 0.951 0.401 4.5e-82
TIGR_CMR|CHY_1144 583 CHY_1144 "pyruvate kinase" [Ca 0.772 0.765 0.394 4.5e-82
TIGR_CMR|VC_0485470 VC_0485 "pyruvate kinase I" [V 0.774 0.951 0.401 4.5e-82
FB|FBgn0003178533 PyK "Pyruvate kinase" [Drosoph 0.783 0.848 0.394 4.2e-79
WB|WBGene00014001515 pyk-2 [Caenorhabditis elegans 0.811 0.908 0.374 4.8e-78
TAIR|locus:2176912 PKP-BETA1 "plastidic pyruvate kinase beta subunit 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2382 (843.6 bits), Expect = 2.8e-247, P = 2.8e-247
 Identities = 468/579 (80%), Positives = 506/579 (87%)

Query:     1 MAQVVATRSIQSSFMCPASGSAQERASEKLKPSSFASTVLSREEKK--RVTLVRKSTKIS 58
             MAQVVATRSIQ S + P  GS   R+ + LKP+SFA  VL  E K+  RV++  +    +
Sbjct:     1 MAQVVATRSIQGSMLSPNGGSVSTRSEKLLKPASFAVKVLGNEAKRSGRVSVRSRRVVDT 60

Query:    59 AQKATRXXXXXXXXXXXXXXKRDGEFQHFGGLQQLGDTSVSMWTKPTVRRKTKIVCTIGP 118
               ++ R               R+ + +    +QQ GDTSV MW+KPTVRRKTKIVCT+GP
Sbjct:    61 TVRSARVETEVIPVSPEDVPNREEQLERLLEMQQFGDTSVGMWSKPTVRRKTKIVCTVGP 120

Query:   119 STNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPE 178
             STNTREMIWKLAEAGMNVAR+NMSHGDHASH+KVIDLVKEYNAQ+KDN IAIMLDTKGPE
Sbjct:   121 STNTREMIWKLAEAGMNVARMNMSHGDHASHKKVIDLVKEYNAQTKDNTIAIMLDTKGPE 180

Query:   179 VRSGDLPQPITLTSGQEFTFTIQRGVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSLLV 238
             VRSGDLPQPI L  GQEFTFTI+RGV +  CVSVNYDDFVNDVE GDMLLVDGGMMS +V
Sbjct:   181 VRSGDLPQPIMLDPGQEFTFTIERGVSTPSCVSVNYDDFVNDVEAGDMLLVDGGMMSFMV 240

Query:   239 KSKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFV 298
             KSKT+DSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDW+DIKFGV+NKVDFYAVSFV
Sbjct:   241 KSKTKDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWEDIKFGVENKVDFYAVSFV 300

Query:   299 KDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEE 358
             KDAQVVHELK YL++ GADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEE
Sbjct:   301 KDAQVVHELKKYLQNSGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEE 360

Query:   359 VPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGET 418
             VP+LQEEII  CRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGET
Sbjct:   361 VPILQEEIINLCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGET 420

Query:   419 AHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTLGTSI 478
             AHGKFPLKA  VMHTV+LRTEATIT G MPPNLGQAFKNHMSEMFAYHATMMSNTLGTS 
Sbjct:   421 AHGKFPLKAAGVMHTVALRTEATITSGEMPPNLGQAFKNHMSEMFAYHATMMSNTLGTST 480

Query:   479 VVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDNAL 538
             VVFTRTGFMAILLSHYRPSGTI+AFTNEK+IQQRL+LYQGVCPIYMEF+DDAEETF NAL
Sbjct:   481 VVFTRTGFMAILLSHYRPSGTIYAFTNEKKIQQRLALYQGVCPIYMEFTDDAEETFANAL 540

Query:   539 GLLQKQGMVKEGEEVALLQSGRQPIWRFQSTHNIQVRKV 577
               L KQGMVK+GEE+A++QSG QPIWR QSTHNIQVRKV
Sbjct:   541 ATLLKQGMVKKGEEIAIVQSGTQPIWRSQSTHNIQVRKV 579
GO:0000287 "magnesium ion binding" evidence=IEA;IDA
GO:0003824 "catalytic activity" evidence=IEA
GO:0004743 "pyruvate kinase activity" evidence=IEA;ISS;IDA
GO:0006096 "glycolysis" evidence=IEA;ISS
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0030955 "potassium ion binding" evidence=IEA;IDA
GO:0005739 "mitochondrion" evidence=IDA
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0046686 "response to cadmium ion" evidence=IEP
GO:0010431 "seed maturation" evidence=IMP
GO:0006633 "fatty acid biosynthetic process" evidence=IMP
GO:0048316 "seed development" evidence=IMP
GO:0006629 "lipid metabolic process" evidence=IGI
GO:0005829 "cytosol" evidence=RCA
TAIR|locus:2033760 PKp3 "plastidial pyruvate kinase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2084583 PKP-ALPHA [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|BA_4843 BA_4843 "pyruvate kinase" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
UNIPROTKB|P0AD61 pykF "pyruvate kinase I monomer" [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KUN0 VC_0485 "Pyruvate kinase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_1144 CHY_1144 "pyruvate kinase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
TIGR_CMR|VC_0485 VC_0485 "pyruvate kinase I" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms
FB|FBgn0003178 PyK "Pyruvate kinase" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
WB|WBGene00014001 pyk-2 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q40546KPYG_TOBAC2, ., 7, ., 1, ., 4, 00.78930.81450.8362N/Ano
P14618KPYM_HUMAN2, ., 7, ., 1, ., 4, 00.36860.80930.8794yesno
P11980KPYM_RAT2, ., 7, ., 1, ., 4, 00.36710.81280.8832yesno
Q9FLW9PKP2_ARATH2, ., 7, ., 1, ., 4, 00.82721.00.9965yesno
Q5NVN0KPYM_PONAB2, ., 7, ., 1, ., 4, 00.36250.80930.8794yesno
O62619KPYK_DROME2, ., 7, ., 1, ., 4, 00.37860.83530.9043yesno
Q93Z53PKP3_ARATH2, ., 7, ., 1, ., 4, 00.78550.81450.8231nono
P11974KPYM_RABIT2, ., 7, ., 1, ., 4, 00.36100.81280.8832yesno
P55964KPYG_RICCO2, ., 7, ., 1, ., 4, 00.79420.72090.9952N/Ano
P00548KPYK_CHICK2, ., 7, ., 1, ., 4, 00.36410.81620.8886yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer2.7.1.400.991
3rd Layer2.7.10.976

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query577
PLN02623581 PLN02623, PLN02623, pyruvate kinase 0.0
PRK05826465 PRK05826, PRK05826, pyruvate kinase; Provisional 0.0
TIGR01064473 TIGR01064, pyruv_kin, pyruvate kinase 1e-172
COG0469477 COG0469, PykF, Pyruvate kinase [Carbohydrate trans 1e-170
PLN02762509 PLN02762, PLN02762, pyruvate kinase complex alpha 1e-162
cd00288480 cd00288, Pyruvate_Kinase, Pyruvate kinase (PK): La 1e-150
PRK06354 590 PRK06354, PRK06354, pyruvate kinase; Provisional 1e-137
pfam00224348 pfam00224, PK, Pyruvate kinase, barrel domain 1e-130
PRK09206470 PRK09206, PRK09206, pyruvate kinase; Provisional 1e-129
PRK06247476 PRK06247, PRK06247, pyruvate kinase; Provisional 1e-119
PTZ00066513 PTZ00066, PTZ00066, pyruvate kinase; Provisional 1e-113
PLN02461511 PLN02461, PLN02461, Probable pyruvate kinase 1e-111
PRK06739352 PRK06739, PRK06739, pyruvate kinase; Validated 9e-87
PTZ00300454 PTZ00300, PTZ00300, pyruvate kinase; Provisional 2e-79
PLN02765526 PLN02765, PLN02765, pyruvate kinase 1e-65
PRK08187493 PRK08187, PRK08187, pyruvate kinase; Validated 1e-34
PRK14725608 PRK14725, PRK14725, pyruvate kinase; Provisional 5e-29
pfam02887117 pfam02887, PK_C, Pyruvate kinase, alpha/beta domai 3e-22
PRK14725608 PRK14725, PRK14725, pyruvate kinase; Provisional 8e-07
>gnl|CDD|215334 PLN02623, PLN02623, pyruvate kinase Back     alignment and domain information 
 Score = 1071 bits (2770), Expect = 0.0
 Identities = 479/581 (82%), Positives = 513/581 (88%), Gaps = 7/581 (1%)

Query: 1   MAQVVATRSIQSSFMCPASGSAQERASEKLKPSSFASTVLSREEKKRVTLVRKSTKISAQ 60
            AQVVATRSI SS +  +SGS        L P SFAS VL  E + R  +  +   ++A 
Sbjct: 2   AAQVVATRSIDSSILSSSSGSVSLD---LLSPLSFASKVLGSEARARRRVAVRRRAVTAA 58

Query: 61  --KATRVEPEVVPVSPED--VPKRDGEFQHFGGLQQLGDTSVSMWTKPTVRRKTKIVCTI 116
             ++   E EV+PVSPED      +   +    +QQLG+T+V MW+KP+VRRKTKIVCTI
Sbjct: 59  SLRSKSQETEVIPVSPEDGGANFVEDNEEVLLEIQQLGETAVGMWSKPSVRRKTKIVCTI 118

Query: 117 GPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKG 176
           GPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKG
Sbjct: 119 GPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKG 178

Query: 177 PEVRSGDLPQPITLTSGQEFTFTIQRGVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSL 236
           PEVRSGDLPQPI L  GQEFTFTI+RGV + +CVSVNYDDFVNDVEVGDMLLVDGGMMSL
Sbjct: 179 PEVRSGDLPQPIMLEEGQEFTFTIKRGVSTEDCVSVNYDDFVNDVEVGDMLLVDGGMMSL 238

Query: 237 LVKSKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYAVS 296
            VKSKT DSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDW+DIKFGV+NKVDFYAVS
Sbjct: 239 AVKSKTSDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWEDIKFGVENKVDFYAVS 298

Query: 297 FVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPI 356
           FVKDAQVVHELK+YLKSC ADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPI
Sbjct: 299 FVKDAQVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPI 358

Query: 357 EEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSG 416
           EEVPLLQEEIIR CRSMGK VIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSG
Sbjct: 359 EEVPLLQEEIIRRCRSMGKPVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSG 418

Query: 417 ETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTLGT 476
           ETAHGKFPLKAVKVMHTV+LRTEAT+  G  PPNLGQAFKNHMSEMFA+HATMM+NTLGT
Sbjct: 419 ETAHGKFPLKAVKVMHTVALRTEATLPEGTTPPNLGQAFKNHMSEMFAFHATMMANTLGT 478

Query: 477 SIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDN 536
           SI+VFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRL+LYQGVCPIYM+FSDDAEETF  
Sbjct: 479 SIIVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLALYQGVCPIYMQFSDDAEETFAR 538

Query: 537 ALGLLQKQGMVKEGEEVALLQSGRQPIWRFQSTHNIQVRKV 577
           AL LL  +GMVKEGEEVAL+QSGRQPIWR +STH+IQVRKV
Sbjct: 539 ALSLLLNKGMVKEGEEVALVQSGRQPIWRSESTHHIQVRKV 579

Length = 581
>gnl|CDD|235619 PRK05826, PRK05826, pyruvate kinase; Provisional Back     alignment and domain information
>gnl|CDD|233257 TIGR01064, pyruv_kin, pyruvate kinase Back     alignment and domain information
>gnl|CDD|223545 COG0469, PykF, Pyruvate kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|215407 PLN02762, PLN02762, pyruvate kinase complex alpha subunit Back     alignment and domain information
>gnl|CDD|238178 cd00288, Pyruvate_Kinase, Pyruvate kinase (PK): Large allosteric enzyme that regulates glycolysis through binding of the substrate, phosphoenolpyruvate, and one or more allosteric effectors Back     alignment and domain information
>gnl|CDD|235784 PRK06354, PRK06354, pyruvate kinase; Provisional Back     alignment and domain information
>gnl|CDD|215802 pfam00224, PK, Pyruvate kinase, barrel domain Back     alignment and domain information
>gnl|CDD|181699 PRK09206, PRK09206, pyruvate kinase; Provisional Back     alignment and domain information
>gnl|CDD|180487 PRK06247, PRK06247, pyruvate kinase; Provisional Back     alignment and domain information
>gnl|CDD|173361 PTZ00066, PTZ00066, pyruvate kinase; Provisional Back     alignment and domain information
>gnl|CDD|215255 PLN02461, PLN02461, Probable pyruvate kinase Back     alignment and domain information
>gnl|CDD|180676 PRK06739, PRK06739, pyruvate kinase; Validated Back     alignment and domain information
>gnl|CDD|140321 PTZ00300, PTZ00300, pyruvate kinase; Provisional Back     alignment and domain information
>gnl|CDD|215409 PLN02765, PLN02765, pyruvate kinase Back     alignment and domain information
>gnl|CDD|236178 PRK08187, PRK08187, pyruvate kinase; Validated Back     alignment and domain information
>gnl|CDD|237804 PRK14725, PRK14725, pyruvate kinase; Provisional Back     alignment and domain information
>gnl|CDD|217269 pfam02887, PK_C, Pyruvate kinase, alpha/beta domain Back     alignment and domain information
>gnl|CDD|237804 PRK14725, PRK14725, pyruvate kinase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 577
PLN02623581 pyruvate kinase 100.0
PLN02762509 pyruvate kinase complex alpha subunit 100.0
PTZ00066513 pyruvate kinase; Provisional 100.0
PRK09206470 pyruvate kinase; Provisional 100.0
PRK06247476 pyruvate kinase; Provisional 100.0
COG0469477 PykF Pyruvate kinase [Carbohydrate transport and m 100.0
PLN02461511 Probable pyruvate kinase 100.0
PRK06354 590 pyruvate kinase; Provisional 100.0
PLN02765526 pyruvate kinase 100.0
cd00288480 Pyruvate_Kinase Pyruvate kinase (PK): Large allost 100.0
PRK05826465 pyruvate kinase; Provisional 100.0
PTZ00300454 pyruvate kinase; Provisional 100.0
TIGR01064473 pyruv_kin pyruvate kinase. This enzyme is a homote 100.0
KOG2323501 consensus Pyruvate kinase [Carbohydrate transport 100.0
PF00224348 PK: Pyruvate kinase, barrel domain; InterPro: IPR0 100.0
PRK06739352 pyruvate kinase; Validated 100.0
PRK14725608 pyruvate kinase; Provisional 100.0
PRK08187493 pyruvate kinase; Validated 100.0
PF02887117 PK_C: Pyruvate kinase, alpha/beta domain; InterPro 99.95
TIGR03239249 GarL 2-dehydro-3-deoxyglucarate aldolase. In E. co 99.68
PRK10558256 alpha-dehydro-beta-deoxy-D-glucarate aldolase; Pro 99.67
PRK10128267 2-keto-3-deoxy-L-rhamnonate aldolase; Provisional 99.62
COG3836255 HpcH 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldola 99.61
TIGR02311249 HpaI 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldola 99.56
PF03328221 HpcH_HpaI: HpcH/HpaI aldolase/citrate lyase family 99.42
TIGR01418782 PEP_synth phosphoenolpyruvate synthase. Also calle 99.24
PRK06464795 phosphoenolpyruvate synthase; Validated 99.22
TIGR01588288 citE citrate lyase, beta subunit. This is a model 99.19
TIGR01417565 PTS_I_fam phosphoenolpyruvate-protein phosphotrans 99.09
PRK11177575 phosphoenolpyruvate-protein phosphotransferase; Pr 98.96
COG2301283 CitE Citrate lyase beta subunit [Carbohydrate tran 98.54
cd00727511 malate_synt_A Malate synthase A (MSA), present in 98.42
cd00480511 malate_synt Malate synthase catalyzes the Claisen 98.38
PRK09255531 malate synthase; Validated 98.28
TIGR01344511 malate_syn_A malate synthase A. This model represe 98.27
PF02896293 PEP-utilizers_C: PEP-utilising enzyme, TIM barrel 98.23
PLN02626551 malate synthase 97.92
TIGR01828856 pyru_phos_dikin pyruvate, phosphate dikinase. This 96.92
PRK11061748 fused phosphoenolpyruvate-protein phosphotransfera 96.88
PRK08649368 inosine 5-monophosphate dehydrogenase; Validated 96.77
PF00478352 IMPDH: IMP dehydrogenase / GMP reductase domain; I 96.64
COG1080574 PtsA Phosphoenolpyruvate-protein kinase (PTS syste 96.32
cd00381325 IMPDH IMPDH: The catalytic domain of the inosine m 96.28
TIGR02751506 PEPCase_arch phosphoenolpyruvate carboxylase, arch 95.88
PRK09279879 pyruvate phosphate dikinase; Provisional 95.73
TIGR01304369 IMP_DH_rel_2 IMP dehydrogenase family protein. Thi 95.6
PRK13655494 phosphoenolpyruvate carboxylase; Provisional 95.35
PTZ00314495 inosine-5'-monophosphate dehydrogenase; Provisiona 94.7
PRK00009 911 phosphoenolpyruvate carboxylase; Reviewed 94.45
COG3605756 PtsP Signal transduction protein containing GAF an 94.43
PLN02274505 inosine-5'-monophosphate dehydrogenase 94.28
PRK07807479 inosine 5-monophosphate dehydrogenase; Validated 94.08
TIGR03151307 enACPred_II putative enoyl-(acyl-carrier-protein) 93.7
TIGR01302450 IMP_dehydrog inosine-5'-monophosphate dehydrogenas 93.57
PRK06843404 inosine 5-monophosphate dehydrogenase; Validated 93.49
PRK05096346 guanosine 5'-monophosphate oxidoreductase; Provisi 93.42
TIGR01305343 GMP_reduct_1 guanosine monophosphate reductase, eu 93.39
PRK13125244 trpA tryptophan synthase subunit alpha; Provisiona 92.81
cd00958235 DhnA Class I fructose-1,6-bisphosphate (FBP) aldol 92.7
cd03174265 DRE_TIM_metallolyase DRE-TIM metallolyase superfam 92.29
PTZ00398 974 phosphoenolpyruvate carboxylase; Provisional 92.22
PTZ00170228 D-ribulose-5-phosphate 3-epimerase; Provisional 91.99
cd04740296 DHOD_1B_like Dihydroorotate dehydrogenase (DHOD) c 91.98
PRK01130221 N-acetylmannosamine-6-phosphate 2-epimerase; Provi 91.85
cd04730236 NPD_like 2-Nitropropane dioxygenase (NPD), one of 91.72
cd00429211 RPE Ribulose-5-phosphate 3-epimerase (RPE). This e 91.27
PRK07107502 inosine 5-monophosphate dehydrogenase; Validated 91.23
COG0574740 PpsA Phosphoenolpyruvate synthase/pyruvate phospha 91.2
PRK08883220 ribulose-phosphate 3-epimerase; Provisional 91.16
cd04726202 KGPDC_HPS 3-Keto-L-gulonate 6-phosphate decarboxyl 91.15
TIGR01306321 GMP_reduct_2 guanosine monophosphate reductase, ba 90.87
PRK05458326 guanosine 5'-monophosphate oxidoreductase; Provisi 90.41
PRK08745223 ribulose-phosphate 3-epimerase; Provisional 89.92
TIGR01949258 AroFGH_arch predicted phospho-2-dehydro-3-deoxyhep 89.89
PF01959354 DHQS: 3-dehydroquinate synthase (EC 4.6.1.3); Inte 89.79
PRK09722229 allulose-6-phosphate 3-epimerase; Provisional 89.61
PRK02290344 3-dehydroquinate synthase; Provisional 89.51
cd04722200 TIM_phosphate_binding TIM barrel proteins share a 89.46
TIGR01303475 IMP_DH_rel_1 IMP dehydrogenase family protein. Thi 89.46
cd02940299 DHPD_FMN Dihydropyrimidine dehydrogenase (DHPD) FM 89.45
PRK05567486 inosine 5'-monophosphate dehydrogenase; Reviewed 89.03
PRK00286438 xseA exodeoxyribonuclease VII large subunit; Revie 88.97
PRK05581220 ribulose-phosphate 3-epimerase; Validated 88.85
PLN02334229 ribulose-phosphate 3-epimerase 88.76
PRK13813215 orotidine 5'-phosphate decarboxylase; Provisional 88.7
cd02810289 DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) 88.28
cd04729219 NanE N-acetylmannosamine-6-phosphate epimerase (Na 88.15
TIGR01163210 rpe ribulose-phosphate 3-epimerase. This family co 88.08
cd00945201 Aldolase_Class_I Class I aldolases. The class I al 87.91
PRK08318420 dihydropyrimidine dehydrogenase subunit B; Validat 87.77
PRK00694 606 4-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha 87.68
PF14010491 PEPcase_2: Phosphoenolpyruvate carboxylase; PDB: 3 87.63
COG2352 910 Ppc Phosphoenolpyruvate carboxylase [Energy produc 87.59
CHL00200263 trpA tryptophan synthase alpha subunit; Provisiona 87.57
PF00311 794 PEPcase: Phosphoenolpyruvate carboxylase; InterPro 87.4
cd00331217 IGPS Indole-3-glycerol phosphate synthase (IGPS); 87.4
cd07944266 DRE_TIM_HOA_like 4-hydroxy-2-oxovalerate aldolase- 87.34
PRK05718212 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphog 87.0
TIGR02090363 LEU1_arch isopropylmalate/citramalate/homocitrate 86.77
cd04732234 HisA HisA. Phosphoribosylformimino-5-aminoimidazol 86.75
PRK02048 611 4-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha 86.69
cd00452190 KDPG_aldolase KDPG and KHG aldolase. This family b 86.39
PRK15452 443 putative protease; Provisional 86.35
PRK11858378 aksA trans-homoaconitate synthase; Reviewed 86.26
cd00640244 Trp-synth-beta_II Tryptophan synthase beta superfa 86.15
cd00958235 DhnA Class I fructose-1,6-bisphosphate (FBP) aldol 86.12
PLN02591250 tryptophan synthase 85.89
PRK07695201 transcriptional regulator TenI; Provisional 85.69
PRK07565334 dihydroorotate dehydrogenase 2; Reviewed 85.67
cd07939259 DRE_TIM_NifV Streptomyces rubellomurinus FrbC and 85.43
PRK13307391 bifunctional formaldehyde-activating enzyme/3-hexu 85.38
cd04724242 Tryptophan_synthase_alpha Ttryptophan synthase (TR 85.24
TIGR03128206 RuMP_HxlA 3-hexulose-6-phosphate synthase. at the 85.15
cd07945280 DRE_TIM_CMS Leptospira interrogans citramalate syn 84.05
KOG2550503 consensus IMP dehydrogenase/GMP reductase [Nucleot 83.82
cd07948262 DRE_TIM_HCS Saccharomyces cerevisiae homocitrate s 83.69
PRK00915 513 2-isopropylmalate synthase; Validated 83.61
COG0826347 Collagenase and related proteases [Posttranslation 83.44
PF03102241 NeuB: NeuB family; InterPro: IPR013132 NeuB is the 83.3
PF04551359 GcpE: GcpE protein; InterPro: IPR004588 This prote 83.12
PRK05581220 ribulose-phosphate 3-epimerase; Validated 83.09
PRK09389 488 (R)-citramalate synthase; Provisional 82.93
PRK13210284 putative L-xylulose 5-phosphate 3-epimerase; Revie 82.89
PRK06015201 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphog 82.38
PRK15447301 putative protease; Provisional 82.31
PRK07028430 bifunctional hexulose-6-phosphate synthase/ribonuc 82.3
PLN02746347 hydroxymethylglutaryl-CoA lyase 82.15
PLN02925 733 4-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha 81.66
PRK08385278 nicotinate-nucleotide pyrophosphorylase; Provision 81.39
PRK06512221 thiamine-phosphate pyrophosphorylase; Provisional 81.35
PRK08005210 epimerase; Validated 80.97
PRK00043212 thiE thiamine-phosphate pyrophosphorylase; Reviewe 80.82
TIGR00612346 ispG_gcpE 1-hydroxy-2-methyl-2-(E)-butenyl 4-dipho 80.68
PRK04180293 pyridoxal biosynthesis lyase PdxS; Provisional 80.59
TIGR00262256 trpA tryptophan synthase, alpha subunit. Tryptopha 80.59
PRK07259301 dihydroorotate dehydrogenase 1B; Reviewed 80.56
PF03060330 NMO: Nitronate monooxygenase; InterPro: IPR004136 80.52
TIGR00237432 xseA exodeoxyribonuclease VII, large subunit. This 80.25
PRK04302223 triosephosphate isomerase; Provisional 80.18
PLN02826409 dihydroorotate dehydrogenase 80.15
TIGR00007230 phosphoribosylformimino-5-aminoimidazole carboxami 80.09
>PLN02623 pyruvate kinase Back     alignment and domain information 
Probab=100.00  E-value=5.4e-136  Score=1117.57  Aligned_cols=573  Identities=84%  Similarity=1.213  Sum_probs=525.4

Q ss_pred             hhhhhhhhhhccccccCCCchhhhhhhccCCCccccccccccccccccccccccccccc--cccCCCCceeecCCCCccc
Q 008112            2 AQVVATRSIQSSFMCPASGSAQERASEKLKPSSFASTVLSREEKKRVTLVRKSTKISAQ--KATRVEPEVVPVSPEDVPK   79 (577)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~   79 (577)
                      +|+..++|+.++++++.+|+...   +.+.|.+|+.+.+...++.+.+.+.+.......  ..++++.+++|+||||+..
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (581)
T PLN02623          3 AQVVATRSIDSSILSSSSGSVSL---DLLSPLSFASKVLGSEARARRRVAVRRRAVTAASLRSKSQETEVIPVSPEDGGA   79 (581)
T ss_pred             cccccccccccccccCCCCcccc---cccccccccccccCchhhhhccccccccchhhhhhhccccCcceeecccccccc
Confidence            45556678888888877776443   356888888887776666555544443333333  3778999999999999775


Q ss_pred             --ccccccccccccccccccccccCCCCCCCCcEEEEecCCCCCCHHHHHHHHHhCCcEEEEeccCCChHHHHHHHHHHH
Q 008112           80 --RDGEFQHFGGLQQLGDTSVSMWTKPTVRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVK  157 (577)
Q Consensus        80 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~tKIi~TiGPs~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir  157 (577)
                        ++++.+...+++.++.++.+||+.|..+|||||||||||+|+++|+|++|+++|||+||||||||++++|+++++++|
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rkTKIV~TiGPas~s~e~l~~li~aGmnv~RlNfSHg~~e~h~~~i~~vr  159 (581)
T PLN02623         80 NFVEDNEEVLLEIQQLGETAVGMWSKPSVRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVK  159 (581)
T ss_pred             ccccccccccchhhHHHhhhhhhcCCCCCCCCCeEEEEeCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHH
Confidence              788899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCeeEEEeecCCCeeEEeecCCcEEEcCCCEEEEEEecCCCCceEEeccccccccccCCCCEEEEeCCeEEEE
Q 008112          158 EYNAQSKDNVIAIMLDTKGPEVRSGDLPQPITLTSGQEFTFTIQRGVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSLL  237 (577)
Q Consensus       158 ~~~~~~~~~~i~I~~Dl~GpkiR~g~~~~~i~L~~G~~v~lt~~~~~~~~~~i~v~~~~~~~~v~~Gd~I~idDG~i~l~  237 (577)
                      +++++.++++++|++||||||||+|.+++++.|++||.|+|+.+...++++.+++||++|++++++||.||+|||+|.|+
T Consensus       160 ~~~~~~~~~~iaIl~Dl~GPkIRig~~~~~i~l~~G~~v~lt~~~~~g~~~~i~v~y~~l~~~v~~Gd~IlidDG~i~l~  239 (581)
T PLN02623        160 EYNAQSKDNVIAIMLDTKGPEVRSGDLPQPIMLEEGQEFTFTIKRGVSTEDCVSVNYDDFVNDVEVGDMLLVDGGMMSLA  239 (581)
T ss_pred             HHHHHcCCCceEEEecCCCCceecccCCCCEEecCCCEEEEecCccCCCCCEEeechHHHHhhCCCCCEEEEeCCeEEEE
Confidence            99999755899999999999999999988999999999999987666788899999999999999999999999999999


Q ss_pred             EEEEeCCeEEEEEeeCcEeccCceeeeCCCCCCCCCCCccCHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 008112          238 VKSKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGAD  317 (577)
Q Consensus       238 V~~v~~~~v~~~v~~gG~l~s~Kginlp~~~~~lp~ltekD~~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~~~  317 (577)
                      |++++++.++|+|++||.|+++||||+||+.+++|.|||||++||+|++++|+|||++|||++++||+++++|+...|.+
T Consensus       240 V~~~~~~~v~~~V~~gG~L~s~KgvNlpg~~~~lp~lTekD~~di~f~~~~~vD~ialSFVr~a~DV~~~r~~l~~~~~~  319 (581)
T PLN02623        240 VKSKTSDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWEDIKFGVENKVDFYAVSFVKDAQVVHELKDYLKSCNAD  319 (581)
T ss_pred             EEEEECCEEEEEEEeceEecCCCCCCCCCCcCCCCCCCHHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHHcCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ceEEEeecChhhHhhHHHHHHhcCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHh
Q 008112          318 IHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAE  397 (577)
Q Consensus       318 i~IiaKIEt~~gv~NldeIl~~sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAE  397 (577)
                      +.||+||||++||+|+|+|++.+|||||||||||+++|+++++.+|++|+++|+++|||+|+||||||||+.+|.|||||
T Consensus       320 ~~iiakIEt~eaVeNldeIl~g~DgImIgrgDLgvelg~~~v~~~qk~Ii~~~~~~gKpvivaTQMLESMi~~~~PTRAE  399 (581)
T PLN02623        320 IHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRRCRSMGKPVIVATNMLESMIVHPTPTRAE  399 (581)
T ss_pred             ceEEEEECCHHHHHhHHHHHHhCCEEEECcchhhhhcCcHHHHHHHHHHHHHHHHhCCCEEEECchhhhcccCCCCCchh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhccceEEeccccCCCCCHHHHHHHHHHHHHHHhccccCCCCCCCCCcccCCChhHHHHHHHHHHHhhcCce
Q 008112          398 VSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTLGTS  477 (577)
Q Consensus       398 v~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~~I~~~aE~~~~~~~~~~~l~~~~~~~~~~~ia~~a~~~a~~~~aa  477 (577)
                      ++|++|++.+|+|++|||+||+.|+||+|||++|++||.++|+.+++...+..+......+..+++|.+|+++|+.++++
T Consensus       400 v~Dva~av~dG~d~vmLs~Eta~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~ia~sA~~~A~~l~a~  479 (581)
T PLN02623        400 VSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTEATLPEGTTPPNLGQAFKNHMSEMFAFHATMMANTLGTS  479 (581)
T ss_pred             HHHHHHHHHcCCCEEEecchhhcCcCHHHHHHHHHHHHHHHHhhcccchhhhhhccccCCChHHHHHHHHHHHHHhcCCc
Confidence            99999999999999999999999999999999999999999987544322211111122356799999999999999999


Q ss_pred             EEEEcCChHHHHHHHhhCCCCeEEEEcCcHHHhhhhcccCCeeEEEeccCCCHHHHHHHHHHHHHHcCCCCCCCEEEEEe
Q 008112          478 IVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDNALGLLQKQGMVKEGEEVALLQ  557 (577)
Q Consensus       478 IiV~T~sG~tA~~is~~RP~~PIIAvT~~~~taR~L~L~~GV~Pvl~~~~~d~d~~i~~al~~l~e~Gllk~GD~VVvv~  557 (577)
                      ||+||+||+||+++|||||.|||||+|++++++|+|+|+|||+|+++++..+.+++++.+++++++.|++++||.|++++
T Consensus       480 Ivv~T~sG~tA~~lSr~RP~~pI~avT~~~~~aR~L~L~~GV~P~~~~~~~~~e~~i~~a~~~~~~~g~v~~GD~vviv~  559 (581)
T PLN02623        480 IIVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLALYQGVCPIYMQFSDDAEETFARALSLLLNKGMVKEGEEVALVQ  559 (581)
T ss_pred             EEEECCCcHHHHHHHhhCCCCCEEEECCCHHHHHHhhcccccEEEecCCCCCHHHHHHHHHHHHHHcCCCCCCCEEEEEe
Confidence            99999999999999999999999999999999999999999999999888899999999999999999999999999999


Q ss_pred             cCCCCCCCCCCcceEEEEEC
Q 008112          558 SGRQPIWRFQSTHNIQVRKV  577 (577)
Q Consensus       558 G~~~p~~~~G~tn~irv~~V  577 (577)
                      |+.+|.|..|.||+++|++|
T Consensus       560 g~~~p~~~~g~tn~i~V~~v  579 (581)
T PLN02623        560 SGRQPIWRSESTHHIQVRKV  579 (581)
T ss_pred             ccCCCCCCCCCCeEEEEEEe
Confidence            75457788899999999875

>PLN02762 pyruvate kinase complex alpha subunit Back     alignment and domain information
>PTZ00066 pyruvate kinase; Provisional Back     alignment and domain information
>PRK09206 pyruvate kinase; Provisional Back     alignment and domain information
>PRK06247 pyruvate kinase; Provisional Back     alignment and domain information
>COG0469 PykF Pyruvate kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02461 Probable pyruvate kinase Back     alignment and domain information
>PRK06354 pyruvate kinase; Provisional Back     alignment and domain information
>PLN02765 pyruvate kinase Back     alignment and domain information
>cd00288 Pyruvate_Kinase Pyruvate kinase (PK): Large allosteric enzyme that regulates glycolysis through binding of the substrate, phosphoenolpyruvate, and one or more allosteric effectors Back     alignment and domain information
>PRK05826 pyruvate kinase; Provisional Back     alignment and domain information
>PTZ00300 pyruvate kinase; Provisional Back     alignment and domain information
>TIGR01064 pyruv_kin pyruvate kinase Back     alignment and domain information
>KOG2323 consensus Pyruvate kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF00224 PK: Pyruvate kinase, barrel domain; InterPro: IPR015793 Pyruvate kinase (2 Back     alignment and domain information
>PRK06739 pyruvate kinase; Validated Back     alignment and domain information
>PRK14725 pyruvate kinase; Provisional Back     alignment and domain information
>PRK08187 pyruvate kinase; Validated Back     alignment and domain information
>PF02887 PK_C: Pyruvate kinase, alpha/beta domain; InterPro: IPR015795 Pyruvate kinase (2 Back     alignment and domain information
>TIGR03239 GarL 2-dehydro-3-deoxyglucarate aldolase Back     alignment and domain information
>PRK10558 alpha-dehydro-beta-deoxy-D-glucarate aldolase; Provisional Back     alignment and domain information
>PRK10128 2-keto-3-deoxy-L-rhamnonate aldolase; Provisional Back     alignment and domain information
>COG3836 HpcH 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR02311 HpaI 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase Back     alignment and domain information
>PF03328 HpcH_HpaI: HpcH/HpaI aldolase/citrate lyase family; InterPro: IPR005000 This family includes 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (4 Back     alignment and domain information
>TIGR01418 PEP_synth phosphoenolpyruvate synthase Back     alignment and domain information
>PRK06464 phosphoenolpyruvate synthase; Validated Back     alignment and domain information
>TIGR01588 citE citrate lyase, beta subunit Back     alignment and domain information
>TIGR01417 PTS_I_fam phosphoenolpyruvate-protein phosphotransferase Back     alignment and domain information
>PRK11177 phosphoenolpyruvate-protein phosphotransferase; Provisional Back     alignment and domain information
>COG2301 CitE Citrate lyase beta subunit [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd00727 malate_synt_A Malate synthase A (MSA), present in some bacteria, plants and fungi Back     alignment and domain information
>cd00480 malate_synt Malate synthase catalyzes the Claisen condensation of glyoxylate and acetyl-CoA to malyl-CoA , which hydrolyzes to malate and CoA Back     alignment and domain information
>PRK09255 malate synthase; Validated Back     alignment and domain information
>TIGR01344 malate_syn_A malate synthase A Back     alignment and domain information
>PF02896 PEP-utilizers_C: PEP-utilising enzyme, TIM barrel domain; InterPro: IPR000121 A number of enzymes that catalyze the transfer of a phosphoryl group from phosphoenolpyruvate (PEP) via a phospho-histidine intermediate have been shown to be structurally related [, , , ] Back     alignment and domain information
>PLN02626 malate synthase Back     alignment and domain information
>TIGR01828 pyru_phos_dikin pyruvate, phosphate dikinase Back     alignment and domain information
>PRK11061 fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain; Provisional Back     alignment and domain information
>PRK08649 inosine 5-monophosphate dehydrogenase; Validated Back     alignment and domain information
>PF00478 IMPDH: IMP dehydrogenase / GMP reductase domain; InterPro: IPR001093 Synonym(s): Inosine-5'-monophosphate dehydrogenase, Inosinic acid dehydrogenase; Synonym(s): Guanosine 5'-monophosphate oxidoreductase This entry contains two related enzymes IMP dehydrogenase and GMP reducatase Back     alignment and domain information
>COG1080 PtsA Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd00381 IMPDH IMPDH: The catalytic domain of the inosine monophosphate dehydrogenase Back     alignment and domain information
>TIGR02751 PEPCase_arch phosphoenolpyruvate carboxylase, archaeal type Back     alignment and domain information
>PRK09279 pyruvate phosphate dikinase; Provisional Back     alignment and domain information
>TIGR01304 IMP_DH_rel_2 IMP dehydrogenase family protein Back     alignment and domain information
>PRK13655 phosphoenolpyruvate carboxylase; Provisional Back     alignment and domain information
>PTZ00314 inosine-5'-monophosphate dehydrogenase; Provisional Back     alignment and domain information
>PRK00009 phosphoenolpyruvate carboxylase; Reviewed Back     alignment and domain information
>COG3605 PtsP Signal transduction protein containing GAF and PtsI domains [Signal transduction mechanisms] Back     alignment and domain information
>PLN02274 inosine-5'-monophosphate dehydrogenase Back     alignment and domain information
>PRK07807 inosine 5-monophosphate dehydrogenase; Validated Back     alignment and domain information
>TIGR03151 enACPred_II putative enoyl-(acyl-carrier-protein) reductase II Back     alignment and domain information
>TIGR01302 IMP_dehydrog inosine-5'-monophosphate dehydrogenase Back     alignment and domain information
>PRK06843 inosine 5-monophosphate dehydrogenase; Validated Back     alignment and domain information
>PRK05096 guanosine 5'-monophosphate oxidoreductase; Provisional Back     alignment and domain information
>TIGR01305 GMP_reduct_1 guanosine monophosphate reductase, eukaryotic Back     alignment and domain information
>PRK13125 trpA tryptophan synthase subunit alpha; Provisional Back     alignment and domain information
>cd00958 DhnA Class I fructose-1,6-bisphosphate (FBP) aldolases of the archaeal type (DhnA homologs) found in bacteria and archaea Back     alignment and domain information
>cd03174 DRE_TIM_metallolyase DRE-TIM metallolyase superfamily Back     alignment and domain information
>PTZ00398 phosphoenolpyruvate carboxylase; Provisional Back     alignment and domain information
>PTZ00170 D-ribulose-5-phosphate 3-epimerase; Provisional Back     alignment and domain information
>cd04740 DHOD_1B_like Dihydroorotate dehydrogenase (DHOD) class 1B FMN-binding domain Back     alignment and domain information
>PRK01130 N-acetylmannosamine-6-phosphate 2-epimerase; Provisional Back     alignment and domain information
>cd04730 NPD_like 2-Nitropropane dioxygenase (NPD), one of the nitroalkane oxidizing enzyme families, catalyzes oxidative denitrification of nitroalkanes to their corresponding carbonyl compounds and nitrites Back     alignment and domain information
>cd00429 RPE Ribulose-5-phosphate 3-epimerase (RPE) Back     alignment and domain information
>PRK07107 inosine 5-monophosphate dehydrogenase; Validated Back     alignment and domain information
>COG0574 PpsA Phosphoenolpyruvate synthase/pyruvate phosphate dikinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK08883 ribulose-phosphate 3-epimerase; Provisional Back     alignment and domain information
>cd04726 KGPDC_HPS 3-Keto-L-gulonate 6-phosphate decarboxylase (KGPDC) and D-arabino-3-hexulose-6-phosphate synthase (HPS) Back     alignment and domain information
>TIGR01306 GMP_reduct_2 guanosine monophosphate reductase, bacterial Back     alignment and domain information
>PRK05458 guanosine 5'-monophosphate oxidoreductase; Provisional Back     alignment and domain information
>PRK08745 ribulose-phosphate 3-epimerase; Provisional Back     alignment and domain information
>TIGR01949 AroFGH_arch predicted phospho-2-dehydro-3-deoxyheptonate aldolase Back     alignment and domain information
>PF01959 DHQS: 3-dehydroquinate synthase (EC 4 Back     alignment and domain information
>PRK09722 allulose-6-phosphate 3-epimerase; Provisional Back     alignment and domain information
>PRK02290 3-dehydroquinate synthase; Provisional Back     alignment and domain information
>cd04722 TIM_phosphate_binding TIM barrel proteins share a structurally conserved phosphate binding motif and in general share an eight beta/alpha closed barrel structure Back     alignment and domain information
>TIGR01303 IMP_DH_rel_1 IMP dehydrogenase family protein Back     alignment and domain information
>cd02940 DHPD_FMN Dihydropyrimidine dehydrogenase (DHPD) FMN-binding domain Back     alignment and domain information
>PRK05567 inosine 5'-monophosphate dehydrogenase; Reviewed Back     alignment and domain information
>PRK00286 xseA exodeoxyribonuclease VII large subunit; Reviewed Back     alignment and domain information
>PRK05581 ribulose-phosphate 3-epimerase; Validated Back     alignment and domain information
>PLN02334 ribulose-phosphate 3-epimerase Back     alignment and domain information
>PRK13813 orotidine 5'-phosphate decarboxylase; Provisional Back     alignment and domain information
>cd02810 DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) and Dihydropyrimidine dehydrogenase (DHPD) FMN-binding domain Back     alignment and domain information
>cd04729 NanE N-acetylmannosamine-6-phosphate epimerase (NanE) converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate Back     alignment and domain information
>TIGR01163 rpe ribulose-phosphate 3-epimerase Back     alignment and domain information
>cd00945 Aldolase_Class_I Class I aldolases Back     alignment and domain information
>PRK08318 dihydropyrimidine dehydrogenase subunit B; Validated Back     alignment and domain information
>PRK00694 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Validated Back     alignment and domain information
>PF14010 PEPcase_2: Phosphoenolpyruvate carboxylase; PDB: 3ODM_C Back     alignment and domain information
>COG2352 Ppc Phosphoenolpyruvate carboxylase [Energy production and conversion] Back     alignment and domain information
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional Back     alignment and domain information
>PF00311 PEPcase: Phosphoenolpyruvate carboxylase; InterPro: IPR021135 Phosphoenolpyruvate carboxylase (PEPCase), an enzyme found in all multicellular plants, catalyses the formation of oxaloacetate from phosphoenolpyruvate (PEP) and a hydrocarbonate ion [] Back     alignment and domain information
>cd00331 IGPS Indole-3-glycerol phosphate synthase (IGPS); an enzyme in the tryptophan biosynthetic pathway, catalyzing the ring closure reaction of 1-(o-carboxyphenylamino)-1-deoxyribulose-5-phosphate (CdRP) to indole-3-glycerol phosphate (IGP), accompanied by the release of carbon dioxide and water Back     alignment and domain information
>cd07944 DRE_TIM_HOA_like 4-hydroxy-2-oxovalerate aldolase-like, N-terminal catalytic TIM barrel domain Back     alignment and domain information
>PRK05718 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional Back     alignment and domain information
>TIGR02090 LEU1_arch isopropylmalate/citramalate/homocitrate synthases Back     alignment and domain information
>cd04732 HisA HisA Back     alignment and domain information
>PRK02048 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Provisional Back     alignment and domain information
>cd00452 KDPG_aldolase KDPG and KHG aldolase Back     alignment and domain information
>PRK15452 putative protease; Provisional Back     alignment and domain information
>PRK11858 aksA trans-homoaconitate synthase; Reviewed Back     alignment and domain information
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions Back     alignment and domain information
>cd00958 DhnA Class I fructose-1,6-bisphosphate (FBP) aldolases of the archaeal type (DhnA homologs) found in bacteria and archaea Back     alignment and domain information
>PLN02591 tryptophan synthase Back     alignment and domain information
>PRK07695 transcriptional regulator TenI; Provisional Back     alignment and domain information
>PRK07565 dihydroorotate dehydrogenase 2; Reviewed Back     alignment and domain information
>cd07939 DRE_TIM_NifV Streptomyces rubellomurinus FrbC and related proteins, catalytic TIM barrel domain Back     alignment and domain information
>PRK13307 bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase; Provisional Back     alignment and domain information
>cd04724 Tryptophan_synthase_alpha Ttryptophan synthase (TRPS) alpha subunit (TSA) Back     alignment and domain information
>TIGR03128 RuMP_HxlA 3-hexulose-6-phosphate synthase Back     alignment and domain information
>cd07945 DRE_TIM_CMS Leptospira interrogans citramalate synthase (CMS) and related proteins, N-terminal catalytic TIM barrel domain Back     alignment and domain information
>KOG2550 consensus IMP dehydrogenase/GMP reductase [Nucleotide transport and metabolism] Back     alignment and domain information
>cd07948 DRE_TIM_HCS Saccharomyces cerevisiae homocitrate synthase and related proteins, catalytic TIM barrel domain Back     alignment and domain information
>PRK00915 2-isopropylmalate synthase; Validated Back     alignment and domain information
>COG0826 Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF03102 NeuB: NeuB family; InterPro: IPR013132 NeuB is the prokaryotic N-acetylneuraminic acid synthase (Neu5Ac) Back     alignment and domain information
>PF04551 GcpE: GcpE protein; InterPro: IPR004588 This protein previously of unknown biochemical function is essential in Escherichia coli Back     alignment and domain information
>PRK05581 ribulose-phosphate 3-epimerase; Validated Back     alignment and domain information
>PRK09389 (R)-citramalate synthase; Provisional Back     alignment and domain information
>PRK13210 putative L-xylulose 5-phosphate 3-epimerase; Reviewed Back     alignment and domain information
>PRK06015 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional Back     alignment and domain information
>PRK15447 putative protease; Provisional Back     alignment and domain information
>PRK07028 bifunctional hexulose-6-phosphate synthase/ribonuclease regulator; Validated Back     alignment and domain information
>PLN02746 hydroxymethylglutaryl-CoA lyase Back     alignment and domain information
>PLN02925 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Back     alignment and domain information
>PRK08385 nicotinate-nucleotide pyrophosphorylase; Provisional Back     alignment and domain information
>PRK06512 thiamine-phosphate pyrophosphorylase; Provisional Back     alignment and domain information
>PRK08005 epimerase; Validated Back     alignment and domain information
>PRK00043 thiE thiamine-phosphate pyrophosphorylase; Reviewed Back     alignment and domain information
>TIGR00612 ispG_gcpE 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase Back     alignment and domain information
>PRK04180 pyridoxal biosynthesis lyase PdxS; Provisional Back     alignment and domain information
>TIGR00262 trpA tryptophan synthase, alpha subunit Back     alignment and domain information
>PRK07259 dihydroorotate dehydrogenase 1B; Reviewed Back     alignment and domain information
>PF03060 NMO: Nitronate monooxygenase; InterPro: IPR004136 2-Nitropropane dioxygenase (1 Back     alignment and domain information
>TIGR00237 xseA exodeoxyribonuclease VII, large subunit Back     alignment and domain information
>PRK04302 triosephosphate isomerase; Provisional Back     alignment and domain information
>PLN02826 dihydroorotate dehydrogenase Back     alignment and domain information
>TIGR00007 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query577
3t05_A 606 Crystal Structure Of S. Aureus Pyruvate Kinase Leng 2e-94
2e28_A 587 Crystal Structure Analysis Of Pyruvate Kinase From 1e-89
1pky_A470 Pyruvate Kinase From E. Coli In The T-State Length 1e-87
1e0u_A470 Structure R271l Mutant Of E. Coli Pyruvate Kinase L 2e-87
1e0t_A470 R292d Mutant Of E. Coli Pyruvate Kinase Length = 47 1e-86
1pkm_A530 The Refined Three-Dimensional Structure Of Cat Musc 3e-82
1pkn_A530 Structure Of Rabbit Muscle Pyruvate Kinase Complexe 1e-81
3srf_C551 Human M1 Pyruvate Kinase Length = 551 6e-81
3g2g_A533 S437y Mutant Of Human Muscle Pyruvate Kinase, Isofo 8e-81
1zjh_A548 Structure Of Human Muscle Pyruvate Kinase (Pkm2) Le 1e-80
4b2d_D548 Human Pkm2 With L-serine And Fbp Bound Length = 548 1e-80
3u2z_A533 Activator-Bound Structure Of Human Pyruvate Kinase 1e-80
3gqy_A550 Activator-Bound Structure Of Human Pyruvate Kinase 1e-80
4g1n_A518 Pkm2 In Complex With An Activator Length = 518 1e-80
3n25_A531 The Structure Of Muscle Pyruvate Kinase In Complex 1e-80
1f3x_A530 S402p Mutant Of Rabbit Muscle Pyruvate Kinase Lengt 1e-80
3srd_A551 Human M2 Pyruvate Kinase In Complex With Fructose 1 1e-80
1f3w_A530 Recombinant Rabbit Muscle Pyruvate Kinase Length = 1e-80
2g50_A530 The Location Of The Allosteric Amino Acid Binding S 1e-80
1aqf_A530 Pyruvate Kinase From Rabbit Muscle With Mg, K, And 3e-80
3ma8_A534 Crystal Structure Of Cgd1_2040, A Pyruvate Kinase F 3e-80
4drs_A526 Crystal Structure Of Cryptosporidium Parvum Pyruvat 4e-80
1t5a_A567 Human Pyruvate Kinase M2 Length = 567 7e-80
3bjf_A518 Pyruvate Kinase M2 Is A Phosphotyrosine Binding Pro 8e-80
3bjt_A530 Pyruvate Kinase M2 Is A Phosphotyrosine Binding Pro 8e-80
2vgg_A528 Human Erythrocyte Pyruvate Kinase: R479h Mutant Len 4e-78
2vgb_A528 Human Erythrocyte Pyruvate Kinase Length = 528 6e-78
4ip7_A543 Structure Of The S12d Variant Of Human Liver Pyruva 7e-78
2vgi_A528 Human Erythrocyte Pyruvate Kinase: R486w Mutant Len 8e-78
2vgf_A528 Human Erythrocyte Pyruvate Kinase: T384m Mutant Len 3e-77
4ima_A543 The Structure Of C436m-hlpyk In Complex With Citrat 4e-77
3khd_A520 Crystal Structure Of Pff1300w. Length = 520 3e-75
3qv9_A499 Crystal Structure Of Trypanosoma Cruzi Pyruvate Kin 3e-73
3pp7_A498 Crystal Structure Of Leishmania Mexicana Pyruvate K 6e-73
1pkl_A499 The Structure Of Leishmania Pyruvate Kinase Length 6e-73
3e0v_A539 Crystal Structure Of Pyruvate Kinase From Leishmani 7e-73
3eoe_A511 Crystal Structure Of Pyruvate Kinase From Toxoplasm 9e-73
1a3w_A500 Pyruvate Kinase From Saccharomyces Cerevisiae Compl 2e-71
3qtg_A461 Crystal Structure Of Pyruvate Kinase From Pyrobacul 9e-48
>pdb|3T05|A Chain A, Crystal Structure Of S. Aureus Pyruvate Kinase Length = 606 Back     alignment and structure 
Iteration: 1

 Score =  343 bits (880), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 188/459 (40%), Positives = 274/459 (59%), Gaps = 27/459 (5%)
Query: 108 RKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNV 167
           RKTKIVCTIGP++ + EMI KL  AGMNVARLN SHG H  H+  ID +++  A+  D +
Sbjct: 23  RKTKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHKGRIDTIRKV-AKRLDKI 81
Query: 168 IAIMLDTKGPEVRSGDLPQPIT-LTSGQEFTFTIQRGVGSAECVSVNYDDFVNDVEVGDM 226
           +AI+LDTKGPE+R+ ++   I  L  G E   ++    G+ E  SV Y++ +NDV+VG  
Sbjct: 82  VAILLDTKGPEIRTHNMKDGIIELERGNEVIVSMNEVEGTPEKFSVTYENLINDVQVGSY 141
Query: 227 LLVDGGMMSLLVKS--KTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKF 284
           +L+D G++ L VK     +  VKC++++ GELK+++ +N+ G   +LP ITEKD +DI+F
Sbjct: 142 ILLDDGLIELQVKDIDHAKKEVKCDILNSGELKNKKGVNLPGVRVSLPGITEKDAEDIRF 201
Query: 285 GVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAM 344
           G+   VDF A SFV+    V E++  L+   A+I V  KIE+ + I N+  I+  SDG M
Sbjct: 202 GIKENVDFIAASFVRRPSDVLEIREILEEQKANISVFPKIENQEGIDNIEEILEVSDGLM 261
Query: 345 VARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIA 404
           VARGD+G E+P E+VP++Q+++IR C  +GK VI AT ML+SM  +P  TRAE SD+A A
Sbjct: 262 VARGDMGVEIPPEKVPMVQKDLIRQCNKLGKPVITATQMLDSMQRNPRATRAEASDVANA 321
Query: 405 VREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFA 464
           + +G DAVMLSGETA G +P +AVK M  +++  EA            Q +K  +S+   
Sbjct: 322 IYDGTDAVMLSGETAAGLYPEEAVKTMRNIAVSAEA-----------AQDYKKLLSDRTK 370
Query: 465 YHATMMSNTLGTS------------IVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQR 512
              T + N +G S            IV  T +G  A  +S YRP   I A T  +   ++
Sbjct: 371 LVETSLVNAIGISVAHTALNLNVKAIVAATESGSTARTISKYRPHSDIIAVTPSEETARQ 430
Query: 513 LSLYQGVCPIYMEFSDDAEETFDNALGLLQKQGMVKEGE 551
            S+  GV P+  +     +   +NA+    + G V  G+
Sbjct: 431 CSIVWGVQPVVKKGRKSTDALLNNAVATAVETGRVTNGD 469
>pdb|2E28|A Chain A, Crystal Structure Analysis Of Pyruvate Kinase From Bacillus Stearothermophilus Length = 587 Back     alignment and structure
>pdb|1PKY|A Chain A, Pyruvate Kinase From E. Coli In The T-State Length = 470 Back     alignment and structure
>pdb|1E0U|A Chain A, Structure R271l Mutant Of E. Coli Pyruvate Kinase Length = 470 Back     alignment and structure
>pdb|1E0T|A Chain A, R292d Mutant Of E. Coli Pyruvate Kinase Length = 470 Back     alignment and structure
>pdb|1PKM|A Chain A, The Refined Three-Dimensional Structure Of Cat Muscle (M1) Pyruvate Kinase, At A Resolution Of 2.6 Angstroms Length = 530 Back     alignment and structure
>pdb|1PKN|A Chain A, Structure Of Rabbit Muscle Pyruvate Kinase Complexed With Mn2+, K+, And Pyruvate Length = 530 Back     alignment and structure
>pdb|3SRF|C Chain C, Human M1 Pyruvate Kinase Length = 551 Back     alignment and structure
>pdb|3G2G|A Chain A, S437y Mutant Of Human Muscle Pyruvate Kinase, Isoform M2 Length = 533 Back     alignment and structure
>pdb|1ZJH|A Chain A, Structure Of Human Muscle Pyruvate Kinase (Pkm2) Length = 548 Back     alignment and structure
>pdb|4B2D|D Chain D, Human Pkm2 With L-serine And Fbp Bound Length = 548 Back     alignment and structure
>pdb|3U2Z|A Chain A, Activator-Bound Structure Of Human Pyruvate Kinase M2 Length = 533 Back     alignment and structure
>pdb|3GQY|A Chain A, Activator-Bound Structure Of Human Pyruvate Kinase M2 Length = 550 Back     alignment and structure
>pdb|4G1N|A Chain A, Pkm2 In Complex With An Activator Length = 518 Back     alignment and structure
>pdb|3N25|A Chain A, The Structure Of Muscle Pyruvate Kinase In Complex With Proline, Pyruvate, And Mn2+ Length = 531 Back     alignment and structure
>pdb|1F3X|A Chain A, S402p Mutant Of Rabbit Muscle Pyruvate Kinase Length = 530 Back     alignment and structure
>pdb|3SRD|A Chain A, Human M2 Pyruvate Kinase In Complex With Fructose 1-6 Bisphosphate And Oxalate. Length = 551 Back     alignment and structure
>pdb|1F3W|A Chain A, Recombinant Rabbit Muscle Pyruvate Kinase Length = 530 Back     alignment and structure
>pdb|2G50|A Chain A, The Location Of The Allosteric Amino Acid Binding Site Of Muscle Pyruvate Kinase. Length = 530 Back     alignment and structure
>pdb|1AQF|A Chain A, Pyruvate Kinase From Rabbit Muscle With Mg, K, And L- Phospholactate Length = 530 Back     alignment and structure
>pdb|3MA8|A Chain A, Crystal Structure Of Cgd1_2040, A Pyruvate Kinase From Cryptosporidium Parvum Length = 534 Back     alignment and structure
>pdb|4DRS|A Chain A, Crystal Structure Of Cryptosporidium Parvum Pyruvate Kinase Length = 526 Back     alignment and structure
>pdb|1T5A|A Chain A, Human Pyruvate Kinase M2 Length = 567 Back     alignment and structure
>pdb|3BJF|A Chain A, Pyruvate Kinase M2 Is A Phosphotyrosine Binding Protein Length = 518 Back     alignment and structure
>pdb|3BJT|A Chain A, Pyruvate Kinase M2 Is A Phosphotyrosine Binding Protein Length = 530 Back     alignment and structure
>pdb|2VGG|A Chain A, Human Erythrocyte Pyruvate Kinase: R479h Mutant Length = 528 Back     alignment and structure
>pdb|2VGB|A Chain A, Human Erythrocyte Pyruvate Kinase Length = 528 Back     alignment and structure
>pdb|4IP7|A Chain A, Structure Of The S12d Variant Of Human Liver Pyruvate Kinase In Complex With Citrate And Fbp. Length = 543 Back     alignment and structure
>pdb|2VGI|A Chain A, Human Erythrocyte Pyruvate Kinase: R486w Mutant Length = 528 Back     alignment and structure
>pdb|2VGF|A Chain A, Human Erythrocyte Pyruvate Kinase: T384m Mutant Length = 528 Back     alignment and structure
>pdb|4IMA|A Chain A, The Structure Of C436m-hlpyk In Complex With Citrate/mn/atp/fru-1,6-bp Length = 543 Back     alignment and structure
>pdb|3KHD|A Chain A, Crystal Structure Of Pff1300w. Length = 520 Back     alignment and structure
>pdb|3QV9|A Chain A, Crystal Structure Of Trypanosoma Cruzi Pyruvate Kinase(Tcpyk)in Complex With Ponceau S. Length = 499 Back     alignment and structure
>pdb|3PP7|A Chain A, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase In Complex With The Drug Suramin, An Inhibitor Of Glycolysis. Length = 498 Back     alignment and structure
>pdb|1PKL|A Chain A, The Structure Of Leishmania Pyruvate Kinase Length = 499 Back     alignment and structure
>pdb|3E0V|A Chain A, Crystal Structure Of Pyruvate Kinase From Leishmania Mexicana In Complex With Sulphate Ions Length = 539 Back     alignment and structure
>pdb|3EOE|A Chain A, Crystal Structure Of Pyruvate Kinase From Toxoplasma Gondii, 55.M00007 Length = 511 Back     alignment and structure
>pdb|1A3W|A Chain A, Pyruvate Kinase From Saccharomyces Cerevisiae Complexed With Fbp, Pg, Mn2+ And K+ Length = 500 Back     alignment and structure
>pdb|3QTG|A Chain A, Crystal Structure Of Pyruvate Kinase From Pyrobaculum Aerophilum Length = 461 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query577
3gg8_A511 Pyruvate kinase; malaria, genomics, proteomics, gl 0.0
1e0t_A470 Pyruvate kinase, PK; phosphotransferase, glycolysi 0.0
3khd_A520 Pyruvate kinase; malaria, structural genomics, str 0.0
3t05_A 606 Pyruvate kinase, PK; tetramer, glycolysis, transfe 0.0
2e28_A 587 Pyruvate kinase, PK; allosteric, transferase; 2.40 0.0
3hqn_D499 Pyruvate kinase, PK; TIM barrel, T-state enzyme, t 0.0
1a3w_A500 Pyruvate kinase; allosteric regulation, tranferase 0.0
3ma8_A534 Pyruvate kinase; parasitology, pyruvate kiase, gly 0.0
3gr4_A550 Pyruvate kinase isozymes M1/M2; activator, acetyla 0.0
3qtg_A461 Pyruvate kinase, PK; TIM barrel, glycolysis, trans 0.0
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
3qz6_A261 HPCH/HPAI aldolase; structural genomics, PSI-biolo 9e-04
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A Length = 511 Back     alignment and structure
 Score =  551 bits (1422), Expect = 0.0
 Identities = 160/459 (34%), Positives = 248/459 (54%), Gaps = 7/459 (1%)

Query: 102 TKPTVRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNA 161
            +     +T+IVCT+GP+    + + K+ +AGMNV RLN SHGDH +H + +  ++E   
Sbjct: 30  EEDWTAHRTRIVCTMGPACWNVDTLVKMIDAGMNVCRLNFSHGDHETHARTVQNIQEAMK 89

Query: 162 QSKDNVIAIMLDTKGPEVRSGDLP--QPITLTSGQEFTFTIQRGV-GSAECVSVNYDDFV 218
           Q  +  +AI+LDTKGPE+R+G L   +PITL  G          + G    ++ +Y    
Sbjct: 90  QRPEARLAILLDTKGPEIRTGFLKDHKPITLQQGATLKIVTDYNLIGDETTIACSYGALP 149

Query: 219 NDVEVGDMLLVDGGMMSLLVKSKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKD 278
             V+ G+ +L+  G +S+ V     D V  +  +   +  R+++N+      LP I EKD
Sbjct: 150 QSVKPGNTILIADGSLSVKVVEVGSDYVITQAQNTATIGERKNMNLPNVKVQLPVIGEKD 209

Query: 279 WDDI-KFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSII 337
             DI  FG+    +F A SFV+ A  V  ++  L   G  I +I KIE+ + + N   I+
Sbjct: 210 KHDILNFGIPMGCNFIAASFVQSADDVRYIRGLLGPRGRHIRIIPKIENVEGLVNFDEIL 269

Query: 338 TASDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAE 397
             +DG M+ARGDLG E+P E+V L Q+ +I  C  +GK VI AT MLESMI +P PTRAE
Sbjct: 270 AEADGIMIARGDLGMEIPPEKVFLAQKMMIAKCNVVGKPVITATQMLESMIKNPRPTRAE 329

Query: 398 VSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKN 457
            +D+A AV +G D VMLSGETA+G+FP+  V+ M  +    E  +   A+   +  A   
Sbjct: 330 AADVANAVLDGTDCVMLSGETANGEFPVITVETMARICYEAETCVDYPALYRAMCLAVPP 389

Query: 458 HMS--EMFAYHATMMSNTLGTS-IVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLS 514
            +S  E  A  A   +  +  + I+  T TG  A L++ YRP   I A +  +   + L 
Sbjct: 390 PISTQEAVARAAVETAECVNAAIILALTETGQTARLIAKYRPMQPILALSASESTIKHLQ 449

Query: 515 LYQGVCPIYMEFSDDAEETFDNALGLLQKQGMVKEGEEV 553
           + +GV  + +      +    NA+ + +++ +V EGE +
Sbjct: 450 VIRGVTTMQVPSFQGTDHVIRNAIVVAKERELVTEGESI 488
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A Length = 470 Back     alignment and structure
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7} Length = 520 Back     alignment and structure
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* Length = 606 Back     alignment and structure
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus} Length = 587 Back     alignment and structure
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A* Length = 499 Back     alignment and structure
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A Length = 500 Back     alignment and structure
>3ma8_A Pyruvate kinase; parasitology, pyruvate kiase, glycol kinase, magnesium, transferase, structural genomi structural genomics consortium; HET: CIT; 2.64A {Cryptosporidium parvum} Length = 534 Back     alignment and structure
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 1zjh_A 3g2g_A 1t5a_A* 3bjt_A 3bjf_A* 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* 1aqf_A* 1pkm_A 2g50_A* 1pkn_A 2vgb_A* 2vgf_A* 2vgg_A* ... Length = 550 Back     alignment and structure
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum} Length = 461 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} Length = 261 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query577
3gr4_A550 Pyruvate kinase isozymes M1/M2; activator, acetyla 100.0
3khd_A520 Pyruvate kinase; malaria, structural genomics, str 100.0
4drs_A526 Pyruvate kinase; glycolysis, allosteric EN transfe 100.0
3hqn_D499 Pyruvate kinase, PK; TIM barrel, T-state enzyme, t 100.0
3gg8_A511 Pyruvate kinase; malaria, genomics, proteomics, gl 100.0
1e0t_A470 Pyruvate kinase, PK; phosphotransferase, glycolysi 100.0
3t05_A 606 Pyruvate kinase, PK; tetramer, glycolysis, transfe 100.0
2e28_A 587 Pyruvate kinase, PK; allosteric, transferase; 2.40 100.0
3qtg_A461 Pyruvate kinase, PK; TIM barrel, glycolysis, trans 100.0
1a3w_A500 Pyruvate kinase; allosteric regulation, tranferase 100.0
1izc_A339 Macrophomate synthase intermolecular diels-aldera; 99.74
2v5j_A287 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; l 99.66
2vws_A267 YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escher 99.66
3qz6_A261 HPCH/HPAI aldolase; structural genomics, PSI-biolo 99.64
1dxe_A256 2-dehydro-3-deoxy-galactarate aldolase; class II a 99.63
1sgj_A284 Citrate lyase, beta subunit; trimer, TIM barrel, s 99.55
2xz9_A324 Phosphoenolpyruvate-protein kinase (PTS system EI 99.29
3qll_A316 Citrate lyase; beta barrel; 2.45A {Yersinia pestis 99.19
1u5h_A273 CITE; TIM barrel, structural genomics, PSI, protei 99.13
3qqw_A332 Putative citrate lyase; TIM beta/alpha-barrel, str 99.09
2ols_A794 Phosphoenolpyruvate synthase; MC structural genomi 99.06
3r4i_A339 Citrate lyase; TIM beta/alpha-barrel, structural g 99.0
2hwg_A575 Phosphoenolpyruvate-protein phosphotransferase; en 98.92
2wqd_A572 Phosphoenolpyruvate-protein phosphotransferase; ki 98.92
3oyz_A433 Malate synthase; TIM barrel, transferase; HET: ACO 98.81
1vbg_A876 Pyruvate,orthophosphate dikinase; transferase, mai 98.33
1kbl_A873 PPDK, pyruvate phosphate dikinase; transferase, ph 98.19
3cuz_A532 MSA, malate synthase A; TIM barrel, cytoplasm, gly 97.82
3cux_A528 Malate synthase; TIM barrel, glyoxylate bypass, tr 97.66
1p7t_A731 MSG, malate synthase G; TIM barrel, glyoxylate cyc 97.5
1h6z_A913 Pyruvate phosphate dikinase; transferase, tropical 97.18
2x0s_A913 Pyruvate phosphate dikinase; transferase, tropical 96.21
4af0_A556 Inosine-5'-monophosphate dehydrogenase; oxidoreduc 95.24
3ffs_A400 Inosine-5-monophosphate dehydrogenase; beta-alpha 94.59
3f4w_A211 Putative hexulose 6 phosphate synthase; humps, mal 94.44
3odm_A 560 Pepcase, PEPC, phosphoenolpyruvate carboxylase; be 93.97
3usb_A511 Inosine-5'-monophosphate dehydrogenase; structural 93.84
1jqo_A 970 Phosphoenolpyruvate carboxylase; beta barrel, carb 93.55
4fxs_A496 Inosine-5'-monophosphate dehydrogenase; structural 93.52
4fo4_A366 Inosine 5'-monophosphate dehydrogenase; structural 93.41
3khj_A361 Inosine-5-monophosphate dehydrogenase; enzyme-inhi 92.87
3ovp_A228 Ribulose-phosphate 3-epimerase; iron binding, isom 92.58
4avf_A490 Inosine-5'-monophosphate dehydrogenase; oxidoreduc 92.44
1jqn_A 883 Pepcase, PEPC, phosphoenolpyruvate carboxylase; be 92.43
1h1y_A228 D-ribulose-5-phosphate 3-epimerase; oxidative pent 92.05
3igs_A232 N-acetylmannosamine-6-phosphate 2-epimerase 2; ene 92.04
1t57_A206 Conserved protein MTH1675; structural genomics, FM 91.83
2qjg_A273 Putative aldolase MJ0400; beta-alpha barrel, lyase 91.83
3inp_A246 D-ribulose-phosphate 3-epimerase; IDP02542, isomer 91.72
1ydn_A295 Hydroxymethylglutaryl-COA lyase; TIM-barrel protei 91.58
3q58_A229 N-acetylmannosamine-6-phosphate 2-epimerase; TIM b 91.52
1y0e_A223 Putative N-acetylmannosamine-6-phosphate 2-epimer; 91.45
3r2g_A361 Inosine 5'-monophosphate dehydrogenase; structural 91.19
1jcn_A514 Inosine monophosphate dehydrogenase I; IMPD, IMPDH 91.12
1vp8_A201 Hypothetical protein AF0103; putative pyruvate kin 90.98
2z6i_A332 Trans-2-enoyl-ACP reductase II; fatty acid synthes 90.81
3cu2_A237 Ribulose-5-phosphate 3-epimerase; YP_718263.1, rib 90.69
2c6q_A351 GMP reductase 2; TIM barrel, metal-binding, NADP, 90.53
2fli_A220 Ribulose-phosphate 3-epimerase; (beta/alpha)8-barr 90.42
3ctl_A231 D-allulose-6-phosphate 3-epimerase; D-glucitol 6-p 90.39
3bo9_A326 Putative nitroalkan dioxygenase; TM0800, structura 89.69
3ajx_A207 3-hexulose-6-phosphate synthase; HPS, OMPDC supraf 89.44
3ble_A337 Citramalate synthase from leptospira interrogans; 89.17
1w8s_A263 FBP aldolase, fructose-bisphosphate aldolase class 88.92
1tqj_A230 Ribulose-phosphate 3-epimerase; beta-alpha barrel 88.91
1eep_A404 Inosine 5'-monophosphate dehydrogenase; alpha-beta 88.66
3bw2_A369 2-nitropropane dioxygenase; TIM barrel, oxidoreduc 88.33
1gte_A1025 Dihydropyrimidine dehydrogenase; electron transfer 88.18
2ftp_A302 Hydroxymethylglutaryl-COA lyase; structural genomi 87.66
1vrd_A494 Inosine-5'-monophosphate dehydrogenase; TM1347, st 87.53
2gjl_A328 Hypothetical protein PA1024; 2-nitropropane dioxyg 86.5
1f76_A336 Dihydroorotate dehydrogenase; monomer, alpha-beta- 86.23
1h1y_A228 D-ribulose-5-phosphate 3-epimerase; oxidative pent 86.17
3eeg_A325 2-isopropylmalate synthase; 11106D, beta barrel, P 86.16
1tqx_A227 D-ribulose-5-phosphate 3-epimerase, putative; stru 85.21
2yw3_A207 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deox 85.08
1wbh_A214 KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} 84.76
1w8s_A263 FBP aldolase, fructose-bisphosphate aldolase class 84.56
4g9p_A406 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; 84.39
2qjg_A273 Putative aldolase MJ0400; beta-alpha barrel, lyase 84.24
1yad_A221 Regulatory protein TENI; TIM barrel, transcription 84.23
1ypf_A336 GMP reductase; GUAC, purines, pyrimidines, nucleos 84.14
3qja_A272 IGPS, indole-3-glycerol phosphate synthase; struct 83.85
1mxs_A225 KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate a 83.61
1ydo_A307 HMG-COA lyase; TIM-barrel protein, structural geno 83.58
1rpx_A230 Protein (ribulose-phosphate 3-epimerase); chloropl 83.41
3vnd_A267 TSA, tryptophan synthase alpha chain; psychrophili 83.16
1vhc_A224 Putative KHG/KDPG aldolase; structural genomics, u 83.08
2cw6_A298 Hydroxymethylglutaryl-COA lyase, mitochondrial; HM 82.87
3tsm_A272 IGPS, indole-3-glycerol phosphate synthase; struct 82.68
3nvt_A385 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; 82.43
2qr6_A393 IMP dehydrogenase/GMP reductase; NP_599840.1, G re 82.08
1geq_A248 Tryptophan synthase alpha-subunit; hyperthermophIl 81.94
4e38_A232 Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho 81.58
3jr2_A218 Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulon 81.5
1n7k_A234 Deoxyribose-phosphate aldolase; A.pernix, tetramer 80.62
1jub_A311 Dihydroorotate dehydrogenase A; homodimer, alpha-b 80.57
3g8r_A350 Probable spore coat polysaccharide biosynthesis P; 80.37
2cu0_A486 Inosine-5'-monophosphate dehydrogenase; structural 80.32
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ... Back     alignment and structure
Probab=100.00  E-value=8.8e-137  Score=1122.39  Aligned_cols=486  Identities=37%  Similarity=0.579  Sum_probs=458.5

Q ss_pred             ccccccccccccccccccccccCCCCCCCCcEEEEecCCCCCCHHHHHHHHHhCCcEEEEeccCCChHHHHHHHHHHHHH
Q 008112           80 RDGEFQHFGGLQQLGDTSVSMWTKPTVRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEY  159 (577)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~tKIi~TiGPs~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~  159 (577)
                      -+++|+|+|.|+.        +++|..+|||||||||||+|+++|+|++|+++||||||||||||++|+|+++|+++|++
T Consensus        42 ~~~~l~~~~~l~~--------~~~~~~~rkTKIV~TiGPas~~~e~l~~Li~aGmnv~RlNfSHG~~e~h~~~i~~iR~a  113 (550)
T 3gr4_A           42 ADTFLEHMCRLDI--------DSPPITARNTGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTA  113 (550)
T ss_dssp             CSSHHHHHHTCCT--------TSCCCSCCCSEEEEECSTTTCSHHHHHHHHHHTCCEEEEETTSSCHHHHHHHHHHHHHH
T ss_pred             cccHHHHhhccCC--------CCCCccCCCceEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHH
Confidence            4678999999987        67788899999999999999999999999999999999999999999999999999999


Q ss_pred             HHh------cCCCeeEEEeecCCCeeEEeecCC----cEEEcCCCEEEEEEecC---CCCceEEeccccccccccCCCCE
Q 008112          160 NAQ------SKDNVIAIMLDTKGPEVRSGDLPQ----PITLTSGQEFTFTIQRG---VGSAECVSVNYDDFVNDVEVGDM  226 (577)
Q Consensus       160 ~~~------~~~~~i~I~~Dl~GpkiR~g~~~~----~i~L~~G~~v~lt~~~~---~~~~~~i~v~~~~~~~~v~~Gd~  226 (577)
                      .++      ++ +||+||+||||||||+|.+.+    +++|++|+.|+|+.++.   .++.+.|++||++|+++|++||+
T Consensus       114 ~~~~~~~~~~~-~~vaIllDlkGPkIR~G~~~~~~~~~v~L~~G~~~~lt~~~~~~~~g~~~~i~v~y~~l~~~v~~Gd~  192 (550)
T 3gr4_A          114 TESFASDPILY-RPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSK  192 (550)
T ss_dssp             HHTTTTCTTTC-CCCEEEEECCCSCCBBCCBTTBTTCCEEECTTCEEEEECCGGGTTCBCSSEEEBSCTTHHHHCCTTCE
T ss_pred             HHhhccccccC-ceEEEEEeCCCCEEEEEecCCCCCCCeEEcCCCEEEEEeCCcccCCCCccEEecchHHHHhhcCCCCE
Confidence            998      77 999999999999999999963    79999999999998753   57888999999999999999999


Q ss_pred             EEEeCCeEEEEEEEEeCCeEEEEEeeCcEeccCceeeeCCCCCCCCCCCccCHHHHHHHHhcCCCEEEEcCCCCHHHHHH
Q 008112          227 LLVDGGMMSLLVKSKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHE  306 (577)
Q Consensus       227 I~idDG~i~l~V~~v~~~~v~~~v~~gG~l~s~Kginlp~~~~~lp~ltekD~~dI~~al~~gvD~I~~SfV~sa~dv~~  306 (577)
                      ||+|||+|.|+|++++++.+.|+|++||.|+++||||+||..+++|+|||||++||+|++++|+|||++|||++++|+.+
T Consensus       193 IlidDG~i~l~V~~v~~~~v~~~V~~gG~L~s~KgvNlPg~~l~lpalTekD~~dl~f~~~~~vD~ia~SfVr~a~Dv~~  272 (550)
T 3gr4_A          193 IYVDDGLISLQVKQKGADFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKASDVHE  272 (550)
T ss_dssp             EEETTTTEEEEEEEECSSEEEEEEEECEEECSSCBEECTTSCCCCCSSCHHHHHHHHHHHHTTCSEEEETTCCSHHHHHH
T ss_pred             EEEeCCEEEEEEEEEeCCEEEEEEEeCcEEcCCceeecCCCccCCCCCCHHHHHHHHHHHHcCCCEEEecCCCCHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCceEEEeecChhhHhhHHHHHHhcCEEEEcCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHh
Q 008112          307 LKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLES  386 (577)
Q Consensus       307 lr~~l~~~~~~i~IiaKIEt~~gv~NldeIl~~sDGImIaRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeS  386 (577)
                      +|+++.+.|.++.|||||||++||+|+|+|++++|||||||||||+|+|+++|+.+||+|+++|+++|||||+|||||||
T Consensus       273 ~r~~L~~~g~~i~IIAKIE~~eav~nldeIl~~sDgImVaRGDLgvei~~e~vp~~Qk~iI~~c~~agkpVi~ATQMLeS  352 (550)
T 3gr4_A          273 VRKVLGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNRAGKPVICATQMLES  352 (550)
T ss_dssp             HHHHHTTTTTTSEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSTTGG
T ss_pred             HHHHHHhcCCCceEEEEeCCHHHHHHHHHHHHhCCEEEEccchhcccCCHHHHHHHHHHHHHHHHHhCCCEEEEehhhHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHHHHHHHHHHHHHHHhccccCCCCCCCCCc--ccCCChhHHHH
Q 008112          387 MIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQ--AFKNHMSEMFA  464 (577)
Q Consensus       387 M~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~eaV~~m~~I~~~aE~~~~~~~~~~~l~~--~~~~~~~~~ia  464 (577)
                      |+++|+|||||++||||||+||+||+|||+|||.|+||+|||++|++||+++|+..++...+..+..  ....+..+++|
T Consensus       353 Mi~~p~PTRAEvsDVanAvldG~DavMLSgETA~G~yPveaV~~M~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia  432 (550)
T 3gr4_A          353 MIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHLIAREAEAAIYHLQLFEELRRLAPITSDPTEATA  432 (550)
T ss_dssp             GGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHSCCCCCHHHHHH
T ss_pred             hhcCCCccHHHHHHHHHHHHcCCcEEEEecCccCCCCHHHHHHHHHHHHHHHhhcchhHHHHHhhhhccCCCCChHHHHH
Confidence            9999999999999999999999999999999999999999999999999999988655332221111  12346889999


Q ss_pred             HHHHHHHhhcCc-eEEEEcCChHHHHHHHhhCCCCeEEEEcCcHHHhhhhcccCCeeEEEeccC------CCHHHHHHHH
Q 008112          465 YHATMMSNTLGT-SIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFS------DDAEETFDNA  537 (577)
Q Consensus       465 ~~a~~~a~~~~a-aIiV~T~sG~tA~~is~~RP~~PIIAvT~~~~taR~L~L~~GV~Pvl~~~~------~d~d~~i~~a  537 (577)
                      .+|+++|+++++ +||+||+||+||+++|||||+|||||+|++++++|||+|+|||+|++++..      .+.+++++.|
T Consensus       433 ~aa~~~A~~l~a~aIv~~T~SG~TA~~iSr~RP~~PIia~T~~~~~aR~l~L~~GV~P~~~~~~~~~~~~~~~d~~~~~a  512 (550)
T 3gr4_A          433 VGAVEASFKCCSGAIIVLTKSGRSAHQVARYRPRAPIIAVTRNPQTARQAHLYRGIFPVLCKDPVQEAWAEDVDLRVNFA  512 (550)
T ss_dssp             HHHHHHHHHTTCSCEEEECSSSHHHHHHHTTCCSSCEEEEESCHHHHHHGGGSTTEEEEECCSCCCSSHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCEEEEECCCcHHHHHHHhhCCCCCEEEEcCCHHHHHHHhccCCeEEEEecccccccccCCHHHHHHHH
Confidence            999999999999 999999999999999999999999999999999999999999999998653      4678899999


Q ss_pred             HHHHHHcCCCCCCCEEEEEecCCCCCCCCCCcceEEEEEC
Q 008112          538 LGLLQKQGMVKEGEEVALLQSGRQPIWRFQSTHNIQVRKV  577 (577)
Q Consensus       538 l~~l~e~Gllk~GD~VVvv~G~~~p~~~~G~tn~irv~~V  577 (577)
                      +++++++|++++||.||+++|.  |.+ +|.||++||..|
T Consensus       513 ~~~~~~~g~~~~GD~vVv~~G~--~~g-~G~TN~lrv~~v  549 (550)
T 3gr4_A          513 MNVGKARGFFKKGDVVIVLTGW--RPG-SGFTNTMRVVPV  549 (550)
T ss_dssp             HHHHHHTTSCCTTCEEEEEEES--SSS-TTCEEEEEEEEC
T ss_pred             HHHHHHcCCCCCcCEEEEEeCC--CCC-CCCCeEEEEEEc
Confidence            9999999999999999999996  655 899999999876
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7} Back     alignment and structure
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A* Back     alignment and structure
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A* Back     alignment and structure
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A Back     alignment and structure
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A Back     alignment and structure
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A* Back     alignment and structure
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus} Back     alignment and structure
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum} Back     alignment and structure
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A Back     alignment and structure
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5 Back     alignment and structure
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A Back     alignment and structure
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A Back     alignment and structure
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0 Back     alignment and structure
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A Back     alignment and structure
>1sgj_A Citrate lyase, beta subunit; trimer, TIM barrel, structural genomics, PSI, protein structure initiative; 1.84A {Deinococcus radiodurans} SCOP: c.1.12.5 Back     alignment and structure
>2xz9_A Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); thermophilic, PEP-utilising enzyme, transferase; 1.68A {Thermoanaerobacter tengcongensis} PDB: 2bg5_A 2xz7_A* Back     alignment and structure
>3qll_A Citrate lyase; beta barrel; 2.45A {Yersinia pestis} Back     alignment and structure
>1u5h_A CITE; TIM barrel, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC, lyase; 1.65A {Mycobacterium tuberculosis} SCOP: c.1.12.5 PDB: 1u5v_A* 1z6k_A Back     alignment and structure
>3qqw_A Putative citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 2.44A {Ralstonia eutropha} Back     alignment and structure
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis} Back     alignment and structure
>3r4i_A Citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.24A {Burkholderia xenovorans} Back     alignment and structure
>2hwg_A Phosphoenolpyruvate-protein phosphotransferase; enzyme I, phosphoenolpyruvate:sugar phosphotransferase system, PTS; HET: NEP; 2.70A {Escherichia coli} PDB: 2kx9_A 2xdf_A 2l5h_A Back     alignment and structure
>2wqd_A Phosphoenolpyruvate-protein phosphotransferase; kinase, cytoplasm, transport, magnesium, PEP- utilising enzyme, phosphotransferase system; 2.40A {Staphylococcus aureus} PDB: 2hro_A Back     alignment and structure
>3oyz_A Malate synthase; TIM barrel, transferase; HET: ACO; 1.95A {Haloferax volcanii} PDB: 3oyx_A* 3pug_A Back     alignment and structure
>1vbg_A Pyruvate,orthophosphate dikinase; transferase, maize, riken structural genomics/proteomics INI RSGI, structural genomics; 2.30A {Zea mays} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1vbh_A* Back     alignment and structure
>1kbl_A PPDK, pyruvate phosphate dikinase; transferase, phosphotransferase; 1.94A {Clostridium symbiosum} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1kc7_A* 1dik_A 1ggo_A 1jde_A 2dik_A 2r82_A 2fm4_A Back     alignment and structure
>3cuz_A MSA, malate synthase A; TIM barrel, cytoplasm, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.04A {Escherichia coli} PDB: 3cv1_A 3cv2_A* Back     alignment and structure
>3cux_A Malate synthase; TIM barrel, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.70A {Bacillus anthracis} Back     alignment and structure
>1p7t_A MSG, malate synthase G; TIM barrel, glyoxylate cycle, acetyl-COA, cysteine-sulfenic lyase; HET: ACO PG4; 1.95A {Escherichia coli str} SCOP: c.1.13.1 PDB: 1y8b_A 1d8c_A* 2jqx_A Back     alignment and structure
>1h6z_A Pyruvate phosphate dikinase; transferase, tropical parasite, trypanosome; 3.00A {Trypanosoma brucei} PDB: 2x0s_A Back     alignment and structure
>2x0s_A Pyruvate phosphate dikinase; transferase, tropical parasite; 3.00A {Trypanosoma brucei} Back     alignment and structure
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B* Back     alignment and structure
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum} Back     alignment and structure
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0 Back     alignment and structure
>3odm_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta-barrel, lyase; 2.95A {Clostridium perfringens} Back     alignment and structure
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A* Back     alignment and structure
>1jqo_A Phosphoenolpyruvate carboxylase; beta barrel, carbon dioxide fixation, lyase; 3.00A {Zea mays} SCOP: c.1.12.3 Back     alignment and structure
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor} Back     alignment and structure
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A Back     alignment and structure
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum} Back     alignment and structure
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A Back     alignment and structure
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa} Back     alignment and structure
>1jqn_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta barrel, Mn2+ and DCDP complex, lyase; HET: DCO; 2.35A {Escherichia coli} SCOP: c.1.12.3 PDB: 1fiy_A* 1qb4_A Back     alignment and structure
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A Back     alignment and structure
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0 Back     alignment and structure
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2 Back     alignment and structure
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A Back     alignment and structure
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp} Back     alignment and structure
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis} Back     alignment and structure
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp} Back     alignment and structure
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5 Back     alignment and structure
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp} Back     alignment and structure
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A* Back     alignment and structure
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2 Back     alignment and structure
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A* Back     alignment and structure
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus} Back     alignment and structure
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A* Back     alignment and structure
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2 Back     alignment and structure
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A* Back     alignment and structure
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8} Back     alignment and structure
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri} Back     alignment and structure
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A* Back     alignment and structure
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A Back     alignment and structure
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2 Back     alignment and structure
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1 Back     alignment and structure
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A* Back     alignment and structure
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A* Back     alignment and structure
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa} Back     alignment and structure
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1 Back     alignment and structure
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A* Back     alignment and structure
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1 Back     alignment and structure
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A Back     alignment and structure
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406} Back     alignment and structure
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2 Back     alignment and structure
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A Back     alignment and structure
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A* Back     alignment and structure
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A Back     alignment and structure
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A* Back     alignment and structure
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A Back     alignment and structure
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A* Back     alignment and structure
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A* Back     alignment and structure
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A* Back     alignment and structure
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1 Back     alignment and structure
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp} Back     alignment and structure
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2 Back     alignment and structure
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina} Back     alignment and structure
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1 Back     alignment and structure
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A* Back     alignment and structure
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0 Back     alignment and structure
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A* Back     alignment and structure
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032} Back     alignment and structure
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A Back     alignment and structure
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3} Back     alignment and structure
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A* Back     alignment and structure
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1 Back     alignment and structure
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A* Back     alignment and structure
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472} Back     alignment and structure
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 577
d1pkla2258 c.1.12.1 (A:1-87,A:187-357) Pyruvate kinase, N-ter 4e-56
d1pkla2258 c.1.12.1 (A:1-87,A:187-357) Pyruvate kinase, N-ter 9e-24
d2g50a2282 c.1.12.1 (A:12-115,A:218-395) Pyruvate kinase, N-t 2e-51
d2g50a2282 c.1.12.1 (A:12-115,A:218-395) Pyruvate kinase, N-t 3e-23
d1a3xa2265 c.1.12.1 (A:1-87,A:189-366) Pyruvate kinase, N-ter 1e-49
d1a3xa2265 c.1.12.1 (A:1-87,A:189-366) Pyruvate kinase, N-ter 2e-24
d1e0ta2246 c.1.12.1 (A:1-69,A:168-344) Pyruvate kinase, N-ter 1e-47
d1e0ta2246 c.1.12.1 (A:1-69,A:168-344) Pyruvate kinase, N-ter 2e-23
d2g50a1102 b.58.1.1 (A:116-217) Pyruvate kinase (PK) {Rabbit 7e-21
d1a3xa1101 b.58.1.1 (A:88-188) Pyruvate kinase (PK) {Baker's 5e-20
d1e0ta198 b.58.1.1 (A:70-167) Pyruvate kinase (PK) {Escheric 3e-19
d2vgba1102 b.58.1.1 (A:160-261) Pyruvate kinase (PK) {Human ( 1e-18
d1e0ta3117 c.49.1.1 (A:354-470) Pyruvate kinase, C-terminal d 1e-17
d1pkla199 b.58.1.1 (A:88-186) Pyruvate kinase (PK) {Leishman 1e-15
d1pkla3141 c.49.1.1 (A:358-498) Pyruvate kinase, C-terminal d 1e-14
d1a3xa3134 c.49.1.1 (A:367-500) Pyruvate kinase, C-terminal d 1e-14
d2vgba3134 c.49.1.1 (A:440-573) Pyruvate kinase, C-terminal d 1e-13
d2g50a3135 c.49.1.1 (A:396-530) Pyruvate kinase, C-terminal d 5e-12
>d1pkla2 c.1.12.1 (A:1-87,A:187-357) Pyruvate kinase, N-terminal domain {Leishmania mexicana [TaxId: 5665]} Length = 258 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Phosphoenolpyruvate/pyruvate domain
family: Pyruvate kinase
domain: Pyruvate kinase, N-terminal domain
species: Leishmania mexicana [TaxId: 5665]

 Score =  187 bits (477), Expect = 4e-56
 Identities = 83/186 (44%), Positives = 118/186 (63%)

Query: 257 KSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGA 316
           +   ++ +   +   P+++ KD  D++FGV+  VD    SF++ A+ V +++  L   G 
Sbjct: 73  ELGVNIAIALDTKGPPAVSAKDRVDLQFGVEQGVDMIFASFIRSAEQVGDVRKALGPKGR 132

Query: 317 DIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRTCRSMGKA 376
           DI +I KIE+   + N+ SII  SDG MVARGDLG E+P E+V + Q+ +I  C   GK 
Sbjct: 133 DIMIICKIENHQGVQNIDSIIEESDGIMVARGDLGVEIPAEKVVVAQKILISKCNVAGKP 192

Query: 377 VIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSL 436
           VI AT MLESM  +P PTRAEVSD+A AV  GAD VMLSGETA GK+P + V+ M  + L
Sbjct: 193 VICATQMLESMTYNPRPTRAEVSDVANAVFNGADCVMLSGETAKGKYPNEVVQYMARICL 252

Query: 437 RTEATI 442
             ++ +
Sbjct: 253 EAQSAL 258
>d1pkla2 c.1.12.1 (A:1-87,A:187-357) Pyruvate kinase, N-terminal domain {Leishmania mexicana [TaxId: 5665]} Length = 258 Back     information, alignment and structure
>d2g50a2 c.1.12.1 (A:12-115,A:218-395) Pyruvate kinase, N-terminal domain {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 282 Back     information, alignment and structure
>d2g50a2 c.1.12.1 (A:12-115,A:218-395) Pyruvate kinase, N-terminal domain {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 282 Back     information, alignment and structure
>d1a3xa2 c.1.12.1 (A:1-87,A:189-366) Pyruvate kinase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 265 Back     information, alignment and structure
>d1a3xa2 c.1.12.1 (A:1-87,A:189-366) Pyruvate kinase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 265 Back     information, alignment and structure
>d1e0ta2 c.1.12.1 (A:1-69,A:168-344) Pyruvate kinase, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 246 Back     information, alignment and structure
>d1e0ta2 c.1.12.1 (A:1-69,A:168-344) Pyruvate kinase, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 246 Back     information, alignment and structure
>d2g50a1 b.58.1.1 (A:116-217) Pyruvate kinase (PK) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 102 Back     information, alignment and structure
>d1a3xa1 b.58.1.1 (A:88-188) Pyruvate kinase (PK) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 101 Back     information, alignment and structure
>d1e0ta1 b.58.1.1 (A:70-167) Pyruvate kinase (PK) {Escherichia coli [TaxId: 562]} Length = 98 Back     information, alignment and structure
>d1e0ta3 c.49.1.1 (A:354-470) Pyruvate kinase, C-terminal domain {Escherichia coli [TaxId: 562]} Length = 117 Back     information, alignment and structure
>d1pkla1 b.58.1.1 (A:88-186) Pyruvate kinase (PK) {Leishmania mexicana [TaxId: 5665]} Length = 99 Back     information, alignment and structure
>d1pkla3 c.49.1.1 (A:358-498) Pyruvate kinase, C-terminal domain {Leishmania mexicana [TaxId: 5665]} Length = 141 Back     information, alignment and structure
>d1a3xa3 c.49.1.1 (A:367-500) Pyruvate kinase, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 134 Back     information, alignment and structure
>d2g50a3 c.49.1.1 (A:396-530) Pyruvate kinase, C-terminal domain {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 135 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query577
d1e0ta2246 Pyruvate kinase, N-terminal domain {Escherichia co 100.0
d1a3xa2265 Pyruvate kinase, N-terminal domain {Baker's yeast 100.0
d1pkla2258 Pyruvate kinase, N-terminal domain {Leishmania mex 100.0
d2g50a2282 Pyruvate kinase, N-terminal domain {Rabbit (Orycto 100.0
d1e0ta3117 Pyruvate kinase, C-terminal domain {Escherichia co 99.97
d2g50a3135 Pyruvate kinase, C-terminal domain {Rabbit (Orycto 99.96
d1pkla3141 Pyruvate kinase, C-terminal domain {Leishmania mex 99.96
d2vgba3134 Pyruvate kinase, C-terminal domain {Human (Homo sa 99.96
d1a3xa3134 Pyruvate kinase, C-terminal domain {Baker's yeast 99.95
d1e0ta198 Pyruvate kinase (PK) {Escherichia coli [TaxId: 562 99.87
d2vgba1102 Pyruvate kinase (PK) {Human (Homo sapiens) [TaxId: 99.87
d2g50a1102 Pyruvate kinase (PK) {Rabbit (Oryctolagus cuniculu 99.87
d1a3xa1101 Pyruvate kinase (PK) {Baker's yeast (Saccharomyces 99.86
d1pkla199 Pyruvate kinase (PK) {Leishmania mexicana [TaxId: 99.85
d1dxea_253 2-dehydro-3-deoxy-galactarate aldolase {Escherichi 99.69
d1izca_299 Macrophomate synthase {Macrophoma commelinae [TaxI 99.62
d1sgja_231 Citrate lyase, beta subunit {Deinococcus radiodura 98.79
d1u5ha_223 Citrate lyase, beta subunit {Mycobacterium tubercu 98.61
d1kbla1364 Pyruvate phosphate dikinase, C-terminal domain {Cl 97.44
d1vbga1356 Pyruvate phosphate dikinase, C-terminal domain {Ma 97.39
d1h6za1366 Pyruvate phosphate dikinase, C-terminal domain {Tr 96.51
d1zfja1365 Inosine monophosphate dehydrogenase (IMPDH) {Strep 95.52
d1vrda1330 Inosine monophosphate dehydrogenase (IMPDH) {Therm 95.13
d1eepa_388 Inosine monophosphate dehydrogenase (IMPDH) {Lyme 94.94
d2cu0a1368 Inosine monophosphate dehydrogenase (IMPDH) {Pyroc 93.29
d1y0ea_222 Putative N-acetylmannosamine-6-phosphate 2-epimera 93.24
d1jr1a1378 Inosine monophosphate dehydrogenase (IMPDH) {Chine 92.91
d1jqoa_ 936 Phosphoenolpyruvate carboxylase {Escherichia coli 87.71
d1jqna_ 880 Phosphoenolpyruvate carboxylase {Escherichia coli 87.27
d1n7ka_234 Deoxyribose-phosphate aldolase DeoC {Archaeon Aero 86.87
d1pvna1362 Inosine monophosphate dehydrogenase (IMPDH) {Tritr 86.33
d1yxya1230 Putative N-acetylmannosamine-6-phosphate 2-epimera 84.3
d2flia1217 D-ribulose-5-phosphate 3-epimerase {Streptococcus 82.94
d1xi3a_206 Thiamin phosphate synthase {Archaeon (Pyrococcus f 82.67
d1gtea2312 Dihydropyrimidine dehydrogenase, domain 4 {Pig (Su 80.31
>d1e0ta2 c.1.12.1 (A:1-69,A:168-344) Pyruvate kinase, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Phosphoenolpyruvate/pyruvate domain
family: Pyruvate kinase
domain: Pyruvate kinase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.8e-79  Score=612.93  Aligned_cols=243  Identities=49%  Similarity=0.780  Sum_probs=221.3

Q ss_pred             CCCcEEEEecCCCCCCHHHHHHHHHhCCcEEEEeccCCChHHHHHHHHHHHHHHHhcCCCeeEEEeecCCCeeEEeecCC
Q 008112          107 RRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEVRSGDLPQ  186 (577)
Q Consensus       107 ~r~tKIi~TiGPs~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~~~~~~~i~I~~Dl~GpkiR~g~~~~  186 (577)
                      ||||||||||||+|+++++|++|+++|||+||||||||++++|+++|+++|+++++.+ ++++|++||+||+        
T Consensus         1 mrkTKIIaTiGPas~~~~~l~~li~aGvdv~RlN~SHg~~~~~~~~i~~ir~~~~~~~-~~~~I~~Dl~gp~--------   71 (246)
T d1e0ta2           1 MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTG-KTAAILLDTKGPA--------   71 (246)
T ss_dssp             CCCSEEEEECCGGGCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHHT-CCCEEEEECCCCS--------
T ss_pred             CCCCeEEEeeCCCcCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHcC-CCCcccccccccc--------
Confidence            7999999999999999999999999999999999999999999999999999999999 9999999999964        


Q ss_pred             cEEEcCCCEEEEEEecCCCCceEEeccccccccccCCCCEEEEeCCeEEEEEEEEeCCeEEEEEeeCcEeccCceeeeCC
Q 008112          187 PITLTSGQEFTFTIQRGVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSKTEDSVKCEVVDGGELKSRRHLNVRG  266 (577)
Q Consensus       187 ~i~L~~G~~v~lt~~~~~~~~~~i~v~~~~~~~~v~~Gd~I~idDG~i~l~V~~v~~~~v~~~v~~gG~l~s~Kginlp~  266 (577)
                                                                                                      
T Consensus        72 --------------------------------------------------------------------------------   71 (246)
T d1e0ta2          72 --------------------------------------------------------------------------------   71 (246)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCCCCccCHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHhcC-CCceEEEeecChhhHhhHHHHHHhcCEEEE
Q 008112          267 KSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCG-ADIHVIVKIESADSIPNLHSIITASDGAMV  345 (577)
Q Consensus       267 ~~~~lp~ltekD~~dI~~al~~gvD~I~~SfV~sa~dv~~lr~~l~~~~-~~i~IiaKIEt~~gv~NldeIl~~sDGImI  345 (577)
                             +|++|.+|++||+++|+|||++|||++++|+.++|+++...+ .+++||+|||+++|++|+++|++++|||||
T Consensus        72 -------ltekD~~~i~~a~~~~vD~ialSFVr~~~Dv~~~r~~l~~~~~~~~~iiaKIE~~~al~nldeIi~~sDgImI  144 (246)
T d1e0ta2          72 -------LAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHIISKIENQEGLNNFDEILEASDGIMV  144 (246)
T ss_dssp             -------SCHHHHHHHHHHHHHTCSEEEESSCCSHHHHHHHHHHHHTTTCTTCEEEEEECSHHHHHTHHHHHHHSSEEEE
T ss_pred             -------cccCcchhhhHHHHcCCCEEEEcCCCCHHHHHHHHHHHHHhCCCCceEEEEecchhhhhchHHHHhhcceEEE
Confidence                   599999999999999999999999999999999999998765 579999999999999999999999999999


Q ss_pred             cCCCccCCCCCCcHHHHHHHHHHHHHHcCCceEEEehhhHhhhcCCCCChHhHHHHHHHHHhccceEEeccccCCCCCHH
Q 008112          346 ARGDLGAELPIEEVPLLQEEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPL  425 (577)
Q Consensus       346 aRGDLg~elg~e~v~~~qk~Ii~~c~~aGKPvi~ATq~LeSM~~~~~PtrAEv~Dv~nav~~G~D~imLs~ETa~G~yP~  425 (577)
                      +|||||+|+|+++||.+||+|++.|+++|||||+||||||||+++|.|||||++||+|||.+|+||+|||+|||+|+||+
T Consensus       145 aRGDLg~ei~~e~vp~~Qk~ii~~~~~~~kpvi~ATq~LeSM~~~p~PTRAEv~Dv~nav~dG~D~vmLs~ETa~G~~P~  224 (246)
T d1e0ta2         145 ARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATMMLDSMIKNPRPTDAEAGDVANAILDGTDAVMLSGESAKGKYPL  224 (246)
T ss_dssp             EHHHHHHHSCHHHHHHHHHHHHHHHHHHTCEEEEECC---------CCCHHHHHHHHHHHHHTCSEEEECCC------CH
T ss_pred             EccchhhhCCHHHHHHHHHHHHHHHHHhCCCEEEehhhhhhhhcCCCCchHHHHHHHHHHHhCCcEEEEccccccCCCHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccccCC
Q 008112          426 KAVKVMHTVSLRTEATITGG  445 (577)
Q Consensus       426 eaV~~m~~I~~~aE~~~~~~  445 (577)
                      +||++|++||+++|+.+.++
T Consensus       225 ~~v~~l~~i~~~~E~~~~~~  244 (246)
T d1e0ta2         225 EAVSIMATICERTDRVMNSR  244 (246)
T ss_dssp             HHHHHHHHHHHHHHTTCCCC
T ss_pred             HHHHHHHHHHHHHHHhhhhc
Confidence            99999999999999887543
>d1a3xa2 c.1.12.1 (A:1-87,A:189-366) Pyruvate kinase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1pkla2 c.1.12.1 (A:1-87,A:187-357) Pyruvate kinase, N-terminal domain {Leishmania mexicana [TaxId: 5665]} Back     information, alignment and structure
>d2g50a2 c.1.12.1 (A:12-115,A:218-395) Pyruvate kinase, N-terminal domain {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1e0ta3 c.49.1.1 (A:354-470) Pyruvate kinase, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2g50a3 c.49.1.1 (A:396-530) Pyruvate kinase, C-terminal domain {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1pkla3 c.49.1.1 (A:358-498) Pyruvate kinase, C-terminal domain {Leishmania mexicana [TaxId: 5665]} Back     information, alignment and structure
>d1a3xa3 c.49.1.1 (A:367-500) Pyruvate kinase, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1e0ta1 b.58.1.1 (A:70-167) Pyruvate kinase (PK) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2g50a1 b.58.1.1 (A:116-217) Pyruvate kinase (PK) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1a3xa1 b.58.1.1 (A:88-188) Pyruvate kinase (PK) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1pkla1 b.58.1.1 (A:88-186) Pyruvate kinase (PK) {Leishmania mexicana [TaxId: 5665]} Back     information, alignment and structure
>d1dxea_ c.1.12.5 (A:) 2-dehydro-3-deoxy-galactarate aldolase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1izca_ c.1.12.5 (A:) Macrophomate synthase {Macrophoma commelinae [TaxId: 108330]} Back     information, alignment and structure
>d1sgja_ c.1.12.5 (A:) Citrate lyase, beta subunit {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d1u5ha_ c.1.12.5 (A:) Citrate lyase, beta subunit {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1kbla1 c.1.12.2 (A:510-873) Pyruvate phosphate dikinase, C-terminal domain {Clostridium symbiosum [TaxId: 1512]} Back     information, alignment and structure
>d1vbga1 c.1.12.2 (A:521-876) Pyruvate phosphate dikinase, C-terminal domain {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1h6za1 c.1.12.2 (A:538-903) Pyruvate phosphate dikinase, C-terminal domain {Trypanosoma brucei [TaxId: 5691]} Back     information, alignment and structure
>d1zfja1 c.1.5.1 (A:2-94,A:221-492) Inosine monophosphate dehydrogenase (IMPDH) {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d1vrda1 c.1.5.1 (A:1-85,A:213-457) Inosine monophosphate dehydrogenase (IMPDH) {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1eepa_ c.1.5.1 (A:) Inosine monophosphate dehydrogenase (IMPDH) {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]} Back     information, alignment and structure
>d2cu0a1 c.1.5.1 (A:3-96,A:207-480) Inosine monophosphate dehydrogenase (IMPDH) {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1y0ea_ c.1.2.5 (A:) Putative N-acetylmannosamine-6-phosphate 2-epimerase NanE {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1jr1a1 c.1.5.1 (A:17-112,A:233-514) Inosine monophosphate dehydrogenase (IMPDH) {Chinese hamster (Cricetulus griseus) [TaxId: 10029]} Back     information, alignment and structure
>d1jqoa_ c.1.12.3 (A:) Phosphoenolpyruvate carboxylase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1jqna_ c.1.12.3 (A:) Phosphoenolpyruvate carboxylase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1n7ka_ c.1.10.1 (A:) Deoxyribose-phosphate aldolase DeoC {Archaeon Aeropyrum pernix [TaxId: 56636]} Back     information, alignment and structure
>d1pvna1 c.1.5.1 (A:2-99,A:231-494) Inosine monophosphate dehydrogenase (IMPDH) {Tritrichomonas foetus [TaxId: 5724]} Back     information, alignment and structure
>d1yxya1 c.1.2.5 (A:4-233) Putative N-acetylmannosamine-6-phosphate 2-epimerase NanE {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d2flia1 c.1.2.2 (A:3-219) D-ribulose-5-phosphate 3-epimerase {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d1xi3a_ c.1.3.1 (A:) Thiamin phosphate synthase {Archaeon (Pyrococcus furiosus) [TaxId: 2261]} Back     information, alignment and structure
>d1gtea2 c.1.4.1 (A:533-844) Dihydropyrimidine dehydrogenase, domain 4 {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure